Query 015463
Match_columns 406
No_of_seqs 333 out of 2272
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:03:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 3.7E-32 1.3E-36 259.2 30.2 295 64-406 14-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 1.1E-26 3.9E-31 222.6 30.1 279 65-405 46-355 (355)
3 3dr2_A Exported gluconolactona 99.9 1.8E-24 6.3E-29 204.2 29.0 258 60-406 37-305 (305)
4 3e5z_A Putative gluconolactona 99.9 2E-23 6.7E-28 195.8 30.5 253 65-405 24-284 (296)
5 3g4e_A Regucalcin; six bladed 99.9 2.7E-22 9.2E-27 188.7 28.7 247 60-396 4-262 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 2.4E-21 8.1E-26 182.2 28.3 260 65-405 14-297 (314)
7 2ghs_A AGR_C_1268P; regucalcin 99.9 1.7E-19 5.7E-24 172.0 29.4 243 59-397 39-293 (326)
8 2dg1_A DRP35, lactonase; beta 99.9 3.5E-19 1.2E-23 169.2 28.3 252 65-405 41-314 (333)
9 2p4o_A Hypothetical protein; p 99.8 9.2E-19 3.1E-23 165.3 27.7 185 69-315 32-232 (306)
10 1q7f_A NHL, brain tumor CG1071 99.8 1.4E-17 4.9E-22 154.6 29.0 244 65-405 26-278 (286)
11 1rwi_B Serine/threonine-protei 99.8 1.4E-17 4.9E-22 152.9 25.3 233 70-406 25-263 (270)
12 2qc5_A Streptogramin B lactona 99.8 2.1E-16 7.1E-21 146.8 31.3 234 66-405 17-258 (300)
13 4hw6_A Hypothetical protein, I 99.8 8.6E-17 2.9E-21 159.2 28.1 241 67-406 137-432 (433)
14 2z2n_A Virginiamycin B lyase; 99.8 8E-16 2.7E-20 142.8 31.5 234 66-405 12-253 (299)
15 2z2n_A Virginiamycin B lyase; 99.8 3.4E-16 1.2E-20 145.2 28.8 231 68-405 56-293 (299)
16 2qe8_A Uncharacterized protein 99.8 8.8E-17 3E-21 154.2 25.3 200 69-315 17-268 (343)
17 2qc5_A Streptogramin B lactona 99.8 3.5E-16 1.2E-20 145.2 28.4 231 67-405 60-298 (300)
18 3hrp_A Uncharacterized protein 99.8 4.3E-16 1.5E-20 153.2 29.4 242 66-406 128-409 (409)
19 4a2l_A BT_4663, two-component 99.8 3.6E-16 1.2E-20 166.4 28.6 236 71-405 359-612 (795)
20 3tc9_A Hypothetical hydrolase; 99.7 8.4E-16 2.9E-20 152.1 28.8 240 66-406 134-429 (430)
21 3fvz_A Peptidyl-glycine alpha- 99.7 3.7E-16 1.3E-20 148.8 24.4 248 67-405 22-320 (329)
22 3v64_C Agrin; beta propeller, 99.7 1.2E-15 4E-20 146.9 24.2 190 66-316 70-266 (349)
23 4a2l_A BT_4663, two-component 99.7 1E-15 3.6E-20 162.8 26.1 232 71-405 408-657 (795)
24 3v9f_A Two-component system se 99.7 7.5E-16 2.6E-20 163.6 24.5 231 71-405 409-654 (781)
25 1npe_A Nidogen, entactin; glyc 99.7 1.7E-15 5.9E-20 139.6 23.7 188 68-315 35-228 (267)
26 3v9f_A Two-component system se 99.7 3.4E-15 1.2E-19 158.5 27.7 239 71-405 315-566 (781)
27 3v65_B Low-density lipoprotein 99.7 1.6E-15 5.6E-20 147.9 22.3 190 66-315 113-308 (386)
28 3a9g_A Putative uncharacterize 99.7 7.8E-15 2.7E-19 141.3 25.9 171 66-273 26-220 (354)
29 1ijq_A LDL receptor, low-densi 99.7 9.6E-15 3.3E-19 138.5 24.8 191 67-315 28-228 (316)
30 3dsm_A Uncharacterized protein 99.7 3.8E-14 1.3E-18 134.9 25.9 220 68-370 83-309 (328)
31 3sov_A LRP-6, low-density lipo 99.6 1.5E-14 5.1E-19 137.3 21.6 189 66-315 32-228 (318)
32 1rwi_B Serine/threonine-protei 99.6 1.9E-14 6.6E-19 131.8 21.4 186 66-315 64-254 (270)
33 3v64_C Agrin; beta propeller, 99.6 1.5E-13 5E-18 132.2 28.0 195 130-404 72-272 (349)
34 3v65_B Low-density lipoprotein 99.6 2.7E-13 9.4E-18 132.1 28.4 195 130-404 115-315 (386)
35 2ism_A Putative oxidoreductase 99.6 6.8E-14 2.3E-18 134.7 23.6 211 66-315 28-287 (352)
36 4a0p_A LRP6, LRP-6, low-densit 99.6 5.3E-14 1.8E-18 145.3 23.4 189 65-314 33-226 (628)
37 3p5b_L Low density lipoprotein 99.6 1.2E-13 4.2E-18 135.2 24.7 189 66-315 109-310 (400)
38 1npe_A Nidogen, entactin; glyc 99.6 4.5E-13 1.5E-17 123.3 27.1 194 131-405 36-236 (267)
39 3kya_A Putative phosphatase; s 99.6 4.8E-13 1.6E-17 133.1 27.4 245 65-406 135-474 (496)
40 3ott_A Two-component system se 99.6 1.3E-13 4.5E-18 145.9 24.7 187 72-315 327-537 (758)
41 1q7f_A NHL, brain tumor CG1071 99.6 8.3E-14 2.8E-18 129.1 19.8 184 67-313 75-269 (286)
42 1ijq_A LDL receptor, low-densi 99.6 1.2E-12 4E-17 124.1 27.8 198 130-405 29-236 (316)
43 3ott_A Two-component system se 99.6 3E-13 1E-17 143.1 25.1 228 71-405 375-624 (758)
44 3s94_A LRP-6, low-density lipo 99.6 1.1E-12 3.7E-17 135.3 27.6 192 66-317 346-543 (619)
45 3p5b_L Low density lipoprotein 99.5 2E-12 6.8E-17 126.6 25.9 197 130-404 111-317 (400)
46 3fvz_A Peptidyl-glycine alpha- 99.5 4.6E-13 1.6E-17 127.3 20.8 148 129-315 22-217 (329)
47 3hrp_A Uncharacterized protein 99.5 1.2E-12 4.2E-17 128.5 24.1 191 68-315 171-400 (409)
48 3s94_A LRP-6, low-density lipo 99.5 6.7E-13 2.3E-17 136.9 22.1 191 63-314 34-232 (619)
49 3das_A Putative oxidoreductase 99.5 1.2E-11 4.1E-16 117.9 28.3 213 64-315 27-282 (347)
50 2p9w_A MAL S 1 allergenic prot 99.5 2.6E-12 8.8E-17 120.5 21.3 200 65-313 9-253 (334)
51 3m0c_C LDL receptor, low-densi 99.5 8E-12 2.7E-16 131.8 27.7 197 130-404 423-629 (791)
52 3hxj_A Pyrrolo-quinoline quino 99.5 2.2E-11 7.4E-16 114.6 27.6 214 79-404 107-321 (330)
53 2fp8_A Strictosidine synthase; 99.5 1.2E-12 4.2E-17 123.8 19.0 185 69-315 80-303 (322)
54 3m0c_C LDL receptor, low-densi 99.5 3E-12 1E-16 135.1 23.5 193 66-316 421-623 (791)
55 1n7d_A LDL receptor, low-densi 99.5 1.3E-13 4.5E-18 144.3 12.7 195 66-315 403-604 (699)
56 3e5z_A Putative gluconolactona 99.5 8.3E-12 2.8E-16 116.2 23.8 183 68-315 68-278 (296)
57 3sov_A LRP-6, low-density lipo 99.5 8.4E-12 2.9E-16 118.3 24.0 195 131-405 35-236 (318)
58 4a0p_A LRP6, LRP-6, low-densit 99.5 6.3E-12 2.1E-16 129.8 24.3 198 65-316 336-540 (628)
59 3vgz_A Uncharacterized protein 99.5 9.8E-11 3.4E-15 110.8 29.9 191 69-314 41-251 (353)
60 3dsm_A Uncharacterized protein 99.5 1.5E-11 5.2E-16 116.8 24.2 185 69-313 44-244 (328)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.7E-11 6E-16 114.4 21.1 183 69-314 71-288 (314)
62 3hfq_A Uncharacterized protein 99.4 1.4E-10 4.7E-15 110.2 27.6 194 67-315 38-261 (347)
63 3dr2_A Exported gluconolactona 99.4 1.9E-11 6.4E-16 114.8 20.9 187 69-315 86-298 (305)
64 3vgz_A Uncharacterized protein 99.4 1E-10 3.5E-15 110.7 24.5 189 71-315 143-335 (353)
65 2dg1_A DRP35, lactonase; beta 99.4 1.9E-11 6.5E-16 115.5 19.3 183 69-315 87-301 (333)
66 4hw6_A Hypothetical protein, I 99.4 3.5E-11 1.2E-15 118.9 21.3 153 130-316 138-295 (433)
67 3g4e_A Regucalcin; six bladed 99.4 2.7E-11 9.3E-16 113.2 19.2 184 69-315 54-263 (297)
68 2g8s_A Glucose/sorbosone dehyd 99.4 7.7E-11 2.6E-15 113.3 22.7 172 66-272 15-219 (353)
69 3hxj_A Pyrrolo-quinoline quino 99.4 1E-10 3.5E-15 110.0 23.0 216 72-405 63-282 (330)
70 1n7d_A LDL receptor, low-densi 99.4 2E-11 6.8E-16 127.8 19.3 198 130-405 405-612 (699)
71 3tc9_A Hypothetical hydrolase; 99.4 3.6E-11 1.2E-15 118.8 19.6 151 130-315 136-291 (430)
72 2qe8_A Uncharacterized protein 99.4 9.2E-11 3.2E-15 112.0 21.9 195 66-315 64-311 (343)
73 3u4y_A Uncharacterized protein 99.4 1E-09 3.6E-14 103.0 28.8 182 68-313 40-240 (331)
74 3no2_A Uncharacterized protein 99.3 3.2E-09 1.1E-13 98.3 27.4 217 79-396 4-232 (276)
75 3kya_A Putative phosphatase; s 99.3 4.2E-10 1.5E-14 111.9 21.5 160 130-316 138-332 (496)
76 3no2_A Uncharacterized protein 99.2 4.3E-09 1.5E-13 97.4 26.2 223 69-383 37-271 (276)
77 1l0q_A Surface layer protein; 99.2 2E-08 6.8E-13 96.5 31.9 184 69-313 32-219 (391)
78 3hfq_A Uncharacterized protein 99.2 7.2E-09 2.4E-13 98.2 28.4 200 68-314 85-306 (347)
79 1ri6_A Putative isomerase YBHE 99.2 1E-08 3.5E-13 96.1 28.2 190 69-315 38-252 (343)
80 2ghs_A AGR_C_1268P; regucalcin 99.2 1.2E-09 4.1E-14 103.5 19.8 181 70-315 91-293 (326)
81 3scy_A Hypothetical bacterial 99.2 4.4E-08 1.5E-12 93.3 30.5 194 67-314 48-279 (361)
82 3u4y_A Uncharacterized protein 99.2 1.3E-08 4.6E-13 95.4 25.6 183 76-316 5-198 (331)
83 1cru_A Protein (soluble quinop 99.2 1.3E-09 4.5E-14 108.2 18.7 182 66-272 24-249 (454)
84 2ism_A Putative oxidoreductase 99.1 3.5E-09 1.2E-13 101.6 20.9 154 131-315 31-223 (352)
85 1jof_A Carboxy-CIS,CIS-muconat 99.1 2.3E-08 7.9E-13 95.9 26.0 191 67-314 38-275 (365)
86 2p4o_A Hypothetical protein; p 99.1 3.5E-09 1.2E-13 99.3 19.2 184 69-315 72-279 (306)
87 1ri6_A Putative isomerase YBHE 99.1 7.1E-08 2.4E-12 90.3 27.6 189 70-313 85-296 (343)
88 3a9g_A Putative uncharacterize 99.1 1.1E-08 3.9E-13 98.1 22.3 193 67-313 71-330 (354)
89 1pby_B Quinohemoprotein amine 99.1 5.7E-08 1.9E-12 90.7 24.8 186 70-311 35-258 (337)
90 2iwa_A Glutamine cyclotransfer 99.1 2.1E-08 7.2E-13 91.9 21.1 143 132-315 22-171 (266)
91 3qqz_A Putative uncharacterize 99.1 4.4E-08 1.5E-12 89.2 22.5 190 66-313 24-242 (255)
92 3das_A Putative oxidoreductase 99.0 4E-08 1.4E-12 93.5 23.2 154 130-315 31-222 (347)
93 1l0q_A Surface layer protein; 99.0 1.9E-07 6.6E-12 89.5 28.4 173 82-316 4-180 (391)
94 3bws_A Protein LP49; two-domai 99.0 1.2E-07 4E-12 92.4 27.2 254 70-405 171-430 (433)
95 1nir_A Nitrite reductase; hemo 99.0 1.6E-07 5.4E-12 95.4 26.9 188 71-313 181-389 (543)
96 3nol_A Glutamine cyclotransfer 99.0 7.1E-08 2.4E-12 87.6 20.5 153 70-280 88-255 (262)
97 3scy_A Hypothetical bacterial 99.0 7E-07 2.4E-11 84.9 28.6 198 69-314 100-326 (361)
98 2iwa_A Glutamine cyclotransfer 98.9 7.1E-08 2.4E-12 88.3 19.6 158 67-281 64-237 (266)
99 3q6k_A 43.2 kDa salivary prote 98.9 2.1E-07 7.1E-12 89.3 22.9 191 131-396 87-343 (381)
100 3bws_A Protein LP49; two-domai 98.9 3.2E-07 1.1E-11 89.2 24.5 184 68-312 211-418 (433)
101 1jmx_B Amine dehydrogenase; ox 98.9 3.4E-07 1.2E-11 85.9 23.4 215 70-311 44-312 (349)
102 1nir_A Nitrite reductase; hemo 98.9 1.2E-06 4E-11 88.9 28.1 182 75-315 144-345 (543)
103 3nok_A Glutaminyl cyclase; bet 98.9 2.5E-07 8.4E-12 84.1 20.5 152 70-279 97-264 (268)
104 3mbr_X Glutamine cyclotransfer 98.9 3.6E-07 1.2E-11 82.2 20.9 153 70-280 66-234 (243)
105 1gxr_A ESG1, transducin-like e 98.8 5.7E-06 2E-10 76.8 29.2 185 70-314 99-285 (337)
106 2wg3_C Hedgehog-interacting pr 98.8 4.7E-07 1.6E-11 89.8 22.1 179 65-269 10-242 (463)
107 1jof_A Carboxy-CIS,CIS-muconat 98.8 3.5E-06 1.2E-10 80.5 26.6 155 131-314 40-213 (365)
108 3nok_A Glutaminyl cyclase; bet 98.8 5.2E-07 1.8E-11 82.0 18.6 190 134-405 58-264 (268)
109 4ery_A WD repeat-containing pr 98.8 2.1E-05 7.1E-10 72.9 30.3 189 65-315 20-213 (312)
110 1jmx_B Amine dehydrogenase; ox 98.8 8.8E-07 3E-11 83.1 20.7 141 135-311 4-164 (349)
111 2hqs_A Protein TOLB; TOLB, PAL 98.8 3.5E-06 1.2E-10 82.3 25.7 179 70-311 180-370 (415)
112 1pby_B Quinohemoprotein amine 98.8 2.3E-06 7.7E-11 79.7 23.3 157 82-281 3-163 (337)
113 4g56_B MGC81050 protein; prote 98.8 1.4E-06 4.6E-11 83.3 22.2 162 71-281 45-213 (357)
114 2g8s_A Glucose/sorbosone dehyd 98.7 1.3E-07 4.4E-12 90.7 14.9 159 130-315 17-218 (353)
115 3zwl_B Eukaryotic translation 98.7 1.1E-05 3.7E-10 75.8 27.5 197 65-316 29-240 (369)
116 1qks_A Cytochrome CD1 nitrite 98.7 6.9E-06 2.4E-10 83.6 27.3 192 69-315 197-410 (567)
117 3qqz_A Putative uncharacterize 98.7 1.1E-05 3.7E-10 73.3 25.8 197 131-404 27-250 (255)
118 1cru_A Protein (soluble quinop 98.7 2.5E-07 8.5E-12 91.7 15.8 164 130-315 26-248 (454)
119 3ow8_A WD repeat-containing pr 98.7 4.4E-05 1.5E-09 71.5 30.2 191 65-315 77-269 (321)
120 2p9w_A MAL S 1 allergenic prot 98.7 5.7E-07 2E-11 84.3 16.1 163 131-318 13-208 (334)
121 3ei3_B DNA damage-binding prot 98.6 3E-05 1E-09 74.0 28.2 198 68-319 73-276 (383)
122 1k8k_C P40, ARP2/3 complex 41 98.6 3.8E-05 1.3E-09 72.4 28.7 155 70-280 10-172 (372)
123 1gxr_A ESG1, transducin-like e 98.6 1.6E-05 5.6E-10 73.7 25.0 184 70-314 143-326 (337)
124 2oiz_A Aromatic amine dehydrog 98.6 4.2E-06 1.4E-10 80.2 21.3 76 229-307 285-360 (361)
125 2ymu_A WD-40 repeat protein; u 98.6 4.6E-05 1.6E-09 76.7 30.0 184 69-317 304-490 (577)
126 3c75_H MADH, methylamine dehyd 98.6 1.5E-05 5.2E-10 77.9 25.3 96 78-195 82-196 (426)
127 2ece_A 462AA long hypothetical 98.6 5.9E-06 2E-10 80.6 22.0 197 67-312 136-399 (462)
128 2ymu_A WD-40 repeat protein; u 98.6 6.3E-05 2.2E-09 75.8 30.5 181 70-314 346-528 (577)
129 2ece_A 462AA long hypothetical 98.6 5.8E-06 2E-10 80.7 21.4 258 78-370 93-399 (462)
130 2hqs_A Protein TOLB; TOLB, PAL 98.6 3E-05 1E-09 75.6 26.6 143 131-312 179-328 (415)
131 3c75_H MADH, methylamine dehyd 98.6 3.3E-06 1.1E-10 82.6 19.4 224 69-313 119-389 (426)
132 2ojh_A Uncharacterized protein 98.6 1.9E-05 6.6E-10 71.4 23.2 146 131-312 42-191 (297)
133 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2E-05 6.9E-10 75.3 24.0 215 79-405 103-335 (376)
134 1got_B GT-beta; complex (GTP-b 98.5 0.0001 3.5E-09 69.4 27.8 196 64-318 51-250 (340)
135 1got_B GT-beta; complex (GTP-b 98.5 3.9E-05 1.3E-09 72.3 24.8 184 71-315 100-291 (340)
136 3ow8_A WD repeat-containing pr 98.5 5.3E-05 1.8E-09 71.0 25.5 185 70-315 124-311 (321)
137 2mad_H Methylamine dehydrogena 98.5 0.00017 5.9E-09 69.3 29.5 189 69-314 67-287 (373)
138 3mbr_X Glutamine cyclotransfer 98.5 2.6E-05 9.1E-10 70.0 21.6 153 177-405 21-177 (243)
139 3nol_A Glutamine cyclotransfer 98.5 1.3E-05 4.4E-10 72.7 19.5 153 177-405 43-199 (262)
140 4a9v_A PHOX; hydrolase, beta-p 98.5 1.2E-06 4.1E-11 87.5 13.5 119 130-269 383-550 (592)
141 2pm9_A Protein WEB1, protein t 98.5 5.9E-05 2E-09 72.3 25.1 191 70-314 69-283 (416)
142 2ecf_A Dipeptidyl peptidase IV 98.5 1.3E-05 4.6E-10 83.6 22.0 161 69-269 37-228 (741)
143 3sjl_D Methylamine dehydrogena 98.5 1.4E-05 4.8E-10 77.0 20.2 227 69-313 79-351 (386)
144 3sre_A PON1, serum paraoxonase 98.5 2.2E-05 7.6E-10 74.8 21.0 151 132-317 51-244 (355)
145 3q7m_A Lipoprotein YFGL, BAMB; 98.5 6.1E-05 2.1E-09 71.9 24.4 223 79-404 143-375 (376)
146 1r5m_A SIR4-interacting protei 98.4 9.9E-05 3.4E-09 70.6 26.0 184 70-312 110-306 (425)
147 2ynn_A Coatomer subunit beta'; 98.4 0.00035 1.2E-08 64.6 28.7 159 64-280 9-171 (304)
148 4gqb_B Methylosome protein 50; 98.4 0.00022 7.7E-09 67.5 27.3 184 71-313 85-277 (344)
149 4ery_A WD repeat-containing pr 98.4 0.00034 1.2E-08 64.5 27.9 156 67-280 64-222 (312)
150 3vl1_A 26S proteasome regulato 98.4 0.0001 3.4E-09 71.0 25.1 180 75-314 104-311 (420)
151 2aq5_A Coronin-1A; WD40 repeat 98.4 0.00026 9E-09 68.0 27.8 189 67-311 80-284 (402)
152 3frx_A Guanine nucleotide-bind 98.4 0.0003 1E-08 65.6 27.2 193 65-319 14-221 (319)
153 4aez_A CDC20, WD repeat-contai 98.4 0.00026 8.7E-09 68.2 27.5 181 71-313 137-322 (401)
154 2ojh_A Uncharacterized protein 98.4 3.6E-05 1.2E-09 69.6 20.2 182 70-311 86-288 (297)
155 4aez_A CDC20, WD repeat-contai 98.4 0.00012 4.2E-09 70.4 25.0 188 71-315 179-370 (401)
156 1erj_A Transcriptional repress 98.4 0.00076 2.6E-08 64.8 30.4 153 71-281 126-287 (393)
157 2aq5_A Coronin-1A; WD40 repeat 98.4 9.2E-05 3.1E-09 71.2 23.9 191 68-308 131-327 (402)
158 4e54_B DNA damage-binding prot 98.4 2.1E-05 7.1E-10 76.9 19.3 191 71-317 122-319 (435)
159 2z3z_A Dipeptidyl aminopeptida 98.3 0.00013 4.6E-09 75.6 25.7 212 69-312 82-329 (706)
160 3o4h_A Acylamino-acid-releasin 98.3 6.8E-06 2.3E-10 83.6 15.3 142 137-316 116-267 (582)
161 2z3z_A Dipeptidyl aminopeptida 98.3 6.3E-05 2.2E-09 78.1 22.9 146 132-312 259-418 (706)
162 3mkq_A Coatomer beta'-subunit; 98.3 0.00041 1.4E-08 72.9 29.4 192 65-315 10-207 (814)
163 3pe7_A Oligogalacturonate lyas 98.3 0.0001 3.6E-09 70.1 22.8 200 74-312 41-257 (388)
164 1qks_A Cytochrome CD1 nitrite 98.3 0.00032 1.1E-08 71.3 27.3 175 81-315 167-363 (567)
165 1r5m_A SIR4-interacting protei 98.3 0.00081 2.8E-08 64.1 28.7 195 69-315 46-268 (425)
166 3fm0_A Protein CIAO1; WDR39,SG 98.3 0.00012 4E-09 69.2 22.4 191 71-319 19-219 (345)
167 1fwx_A Nitrous oxide reductase 98.3 1.3E-05 4.4E-10 80.8 16.2 257 79-373 100-409 (595)
168 3sjl_D Methylamine dehydrogena 98.3 0.00015 5E-09 69.9 22.9 211 69-305 137-384 (386)
169 4gqb_B Methylosome protein 50; 98.3 6E-05 2.1E-09 71.5 20.0 186 71-317 130-323 (344)
170 1yfq_A Cell cycle arrest prote 98.3 8.3E-05 2.8E-09 69.2 20.7 187 69-315 12-215 (342)
171 3frx_A Guanine nucleotide-bind 98.3 0.0011 3.9E-08 61.5 28.4 187 65-313 62-256 (319)
172 1vyh_C Platelet-activating fac 98.3 0.00057 2E-08 66.1 27.1 186 70-315 152-359 (410)
173 2ecf_A Dipeptidyl peptidase IV 98.3 0.00014 4.9E-09 75.7 24.4 211 71-312 111-354 (741)
174 3vl1_A 26S proteasome regulato 98.3 0.00072 2.5E-08 64.9 27.7 160 66-281 137-322 (420)
175 3pe7_A Oligogalacturonate lyas 98.3 6.4E-05 2.2E-09 71.6 19.7 156 73-281 85-273 (388)
176 3jrp_A Fusion protein of prote 98.3 0.00092 3.1E-08 62.7 27.2 197 65-317 8-232 (379)
177 4g56_B MGC81050 protein; prote 98.2 6.9E-05 2.4E-09 71.3 19.2 187 71-316 142-334 (357)
178 1vyh_C Platelet-activating fac 98.2 0.0013 4.4E-08 63.6 28.4 154 67-280 107-264 (410)
179 3zwl_B Eukaryotic translation 98.2 0.00025 8.6E-09 66.3 22.7 198 70-317 117-338 (369)
180 4a11_B DNA excision repair pro 98.2 0.00095 3.3E-08 63.3 27.0 170 65-281 40-218 (408)
181 3dwl_C Actin-related protein 2 98.2 2E-05 6.7E-10 74.9 14.5 191 70-318 13-229 (377)
182 3odt_A Protein DOA1; ubiquitin 98.2 0.0014 4.7E-08 59.7 26.6 182 69-315 60-246 (313)
183 2oiz_A Aromatic amine dehydrog 98.2 0.0016 5.4E-08 62.0 27.7 63 131-194 51-126 (361)
184 1k8k_C P40, ARP2/3 complex 41 98.2 0.00023 8E-09 66.9 21.7 189 69-312 53-262 (372)
185 3s25_A Hypothetical 7-bladed b 98.2 0.00037 1.3E-08 64.9 22.4 174 138-405 111-291 (302)
186 3dm0_A Maltose-binding peripla 98.2 0.0021 7.1E-08 66.6 29.7 191 65-313 427-621 (694)
187 4h5i_A Guanine nucleotide-exch 98.2 0.00022 7.5E-09 68.0 20.7 190 71-318 136-336 (365)
188 1pgu_A Actin interacting prote 98.2 0.00081 2.8E-08 67.8 26.0 192 69-314 19-227 (615)
189 2vdu_B TRNA (guanine-N(7)-)-me 98.2 0.0004 1.4E-08 68.0 23.0 191 70-315 151-374 (450)
190 2mad_H Methylamine dehydrogena 98.1 0.00068 2.3E-08 65.1 23.9 181 69-313 125-337 (373)
191 1pgu_A Actin interacting prote 98.1 0.0018 6.3E-08 65.1 28.1 182 71-314 67-272 (615)
192 1nr0_A Actin interacting prote 98.1 0.0015 5.1E-08 66.7 27.6 82 69-164 191-273 (611)
193 2pbi_B Guanine nucleotide-bind 98.1 0.0048 1.6E-07 58.2 29.1 199 63-318 59-264 (354)
194 2vdu_B TRNA (guanine-N(7)-)-me 98.1 0.0017 6E-08 63.3 26.7 156 70-281 104-271 (450)
195 2pbi_B Guanine nucleotide-bind 98.1 0.0011 3.8E-08 62.7 24.5 186 70-314 156-346 (354)
196 3k26_A Polycomb protein EED; W 98.1 0.00058 2E-08 63.8 22.2 103 71-194 72-179 (366)
197 1mda_H Methylamine dehydrogena 98.1 7.3E-05 2.5E-09 71.8 16.0 216 70-313 67-333 (368)
198 1sq9_A Antiviral protein SKI8; 98.1 0.0013 4.3E-08 62.5 24.9 192 63-313 11-252 (397)
199 3b7f_A Glycosyl hydrolase, BNR 98.1 0.0002 6.8E-09 69.1 19.2 146 76-278 19-205 (394)
200 3q6k_A 43.2 kDa salivary prote 98.1 0.0016 5.3E-08 62.4 24.7 198 67-314 85-343 (381)
201 2xzm_R RACK1; ribosome, transl 98.1 0.0061 2.1E-07 57.0 28.7 195 65-319 18-238 (343)
202 3sfz_A APAF-1, apoptotic pepti 98.1 0.0042 1.5E-07 68.6 31.3 192 65-314 612-818 (1249)
203 3i2n_A WD repeat-containing pr 98.1 0.0012 4.2E-08 61.3 23.4 190 70-313 67-279 (357)
204 2xzm_R RACK1; ribosome, transl 98.0 0.0032 1.1E-07 59.0 26.1 189 66-312 74-273 (343)
205 3f3f_A Nucleoporin SEH1; struc 98.0 0.0014 4.9E-08 60.2 23.0 80 63-162 6-91 (351)
206 3v7d_B Cell division control p 98.0 0.0075 2.6E-07 58.7 29.3 183 73-318 127-334 (464)
207 3dwl_C Actin-related protein 2 98.0 0.00012 4.1E-09 69.4 15.8 190 69-315 56-272 (377)
208 1erj_A Transcriptional repress 98.0 0.0049 1.7E-07 59.0 26.8 205 70-320 66-282 (393)
209 3odt_A Protein DOA1; ubiquitin 98.0 0.00061 2.1E-08 62.2 19.4 150 70-281 144-296 (313)
210 3dw8_B Serine/threonine-protei 98.0 0.0014 4.7E-08 63.4 22.7 204 69-314 29-305 (447)
211 2xyi_A Probable histone-bindin 98.0 0.00066 2.3E-08 66.0 20.5 205 69-319 129-347 (430)
212 3s25_A Hypothetical 7-bladed b 98.0 0.0018 6.2E-08 60.2 22.1 136 79-282 24-177 (302)
213 1sq9_A Antiviral protein SKI8; 98.0 0.00097 3.3E-08 63.3 20.9 164 69-281 187-395 (397)
214 3dm0_A Maltose-binding peripla 97.9 0.0019 6.4E-08 67.0 24.4 157 69-281 473-632 (694)
215 3mkq_A Coatomer beta'-subunit; 97.9 0.0014 4.8E-08 68.7 23.7 186 70-315 57-249 (814)
216 3sfz_A APAF-1, apoptotic pepti 97.9 0.0046 1.6E-07 68.3 28.7 189 69-317 658-863 (1249)
217 3lrv_A PRE-mRNA-splicing facto 97.9 0.0083 2.8E-07 56.0 26.7 146 131-314 126-280 (343)
218 2pm7_B Protein transport prote 97.9 0.0027 9.2E-08 58.3 22.7 194 69-318 10-231 (297)
219 3iz6_a 40S ribosomal protein R 97.9 0.0017 5.9E-08 61.9 22.1 156 72-281 209-375 (380)
220 3jrp_A Fusion protein of prote 97.9 0.0022 7.4E-08 60.1 22.3 193 69-316 56-278 (379)
221 3b7f_A Glycosyl hydrolase, BNR 97.9 0.0012 4.2E-08 63.5 20.7 196 70-313 56-298 (394)
222 3mmy_A MRNA export factor; mRN 97.9 0.0022 7.4E-08 59.8 21.8 105 65-194 36-147 (368)
223 3azo_A Aminopeptidase; POP fam 97.9 0.002 6.9E-08 66.1 23.4 149 131-314 130-313 (662)
224 1yfq_A Cell cycle arrest prote 97.9 0.0025 8.4E-08 59.0 21.7 151 69-281 57-225 (342)
225 1mda_H Methylamine dehydrogena 97.9 0.00048 1.6E-08 66.0 16.9 203 69-304 124-366 (368)
226 3lrv_A PRE-mRNA-splicing facto 97.9 0.0059 2E-07 57.1 24.4 185 78-320 46-239 (343)
227 3ei3_B DNA damage-binding prot 97.9 0.00093 3.2E-08 63.4 18.9 155 69-281 119-282 (383)
228 4h5i_A Guanine nucleotide-exch 97.8 0.00074 2.5E-08 64.3 17.9 155 71-280 179-342 (365)
229 3jro_A Fusion protein of prote 97.8 0.0024 8.2E-08 67.0 23.4 198 65-318 6-231 (753)
230 3dw8_B Serine/threonine-protei 97.8 0.0034 1.2E-07 60.6 22.9 167 66-281 175-373 (447)
231 2ynn_A Coatomer subunit beta'; 97.8 0.014 4.8E-07 53.6 26.1 182 71-315 58-249 (304)
232 4aow_A Guanine nucleotide-bind 97.8 0.019 6.4E-07 52.8 29.6 187 68-313 86-275 (340)
233 1xfd_A DIP, dipeptidyl aminope 97.8 0.0022 7.5E-08 66.4 22.3 212 70-310 62-322 (723)
234 2xyi_A Probable histone-bindin 97.8 0.002 7E-08 62.5 20.8 193 69-315 182-400 (430)
235 3azo_A Aminopeptidase; POP fam 97.8 0.002 6.9E-08 66.1 21.7 156 70-281 131-325 (662)
236 1nr0_A Actin interacting prote 97.8 0.004 1.4E-07 63.5 23.8 190 70-320 20-216 (611)
237 3fm0_A Protein CIAO1; WDR39,SG 97.8 0.0021 7.1E-08 60.4 19.9 158 67-279 60-223 (345)
238 3o4h_A Acylamino-acid-releasin 97.8 0.00073 2.5E-08 68.4 17.7 173 71-311 24-211 (582)
239 2oaj_A Protein SNI1; WD40 repe 97.8 0.0023 7.7E-08 68.8 22.1 191 69-321 18-238 (902)
240 1k32_A Tricorn protease; prote 97.8 0.0026 8.7E-08 69.4 22.6 147 71-269 340-491 (1045)
241 3i2n_A WD repeat-containing pr 97.7 0.00055 1.9E-08 63.8 14.9 154 75-281 124-291 (357)
242 3iz6_a 40S ribosomal protein R 97.7 0.017 6E-07 54.8 25.6 200 64-319 62-274 (380)
243 1k32_A Tricorn protease; prote 97.7 0.00097 3.3E-08 72.7 18.4 178 70-312 297-490 (1045)
244 4e54_B DNA damage-binding prot 97.7 0.005 1.7E-07 59.8 21.8 153 70-281 166-327 (435)
245 3c5m_A Oligogalacturonate lyas 97.7 0.0023 8E-08 60.5 19.0 80 229-311 167-255 (396)
246 4a5s_A Dipeptidyl peptidase 4 97.7 0.015 5.3E-07 60.6 26.7 183 72-283 65-296 (740)
247 1z68_A Fibroblast activation p 97.7 0.002 6.8E-08 66.9 19.8 100 71-192 62-184 (719)
248 3k26_A Polycomb protein EED; W 97.7 0.0065 2.2E-07 56.5 21.6 164 62-281 12-192 (366)
249 2j04_A TAU60, YPL007P, hypothe 97.7 0.001 3.4E-08 67.0 16.5 144 71-268 132-286 (588)
250 2pm9_A Protein WEB1, protein t 97.7 0.0021 7.1E-08 61.4 18.0 200 69-318 114-330 (416)
251 2xdw_A Prolyl endopeptidase; a 97.7 0.015 5.2E-07 60.3 25.9 157 72-282 128-321 (710)
252 1fwx_A Nitrous oxide reductase 97.7 0.0022 7.5E-08 64.7 18.3 72 177-281 277-361 (595)
253 3amr_A 3-phytase; beta-propell 97.6 0.0066 2.3E-07 57.2 20.3 134 143-314 40-200 (355)
254 4aow_A Guanine nucleotide-bind 97.6 0.013 4.3E-07 54.0 22.3 189 70-315 130-327 (340)
255 3gre_A Serine/threonine-protei 97.6 0.012 4.1E-07 56.7 22.8 164 65-280 60-244 (437)
256 1xfd_A DIP, dipeptidyl aminope 97.6 0.0064 2.2E-07 62.9 21.7 152 133-313 257-428 (723)
257 3bg1_A Protein SEC13 homolog; 97.6 0.0029 1E-07 58.6 17.1 105 69-195 14-124 (316)
258 2gop_A Trilobed protease; beta 97.5 0.026 8.8E-07 52.4 23.4 150 69-278 59-250 (347)
259 1tl2_A L10, protein (tachylect 97.5 0.0031 1.1E-07 55.4 15.2 119 56-194 28-152 (236)
260 3zwu_A Alkaline phosphatase PH 97.5 0.00054 1.9E-08 69.4 12.0 118 130-267 383-548 (592)
261 3amr_A 3-phytase; beta-propell 97.5 0.02 7E-07 53.9 21.5 64 250-314 180-251 (355)
262 3jro_A Fusion protein of prote 97.5 0.0077 2.6E-07 63.2 20.9 194 69-317 54-277 (753)
263 2hes_X YDR267CP; beta-propelle 97.5 0.053 1.8E-06 50.2 24.5 155 70-280 60-229 (330)
264 4a11_B DNA excision repair pro 97.5 0.03 1E-06 52.7 23.0 155 69-281 100-276 (408)
265 4a9v_A PHOX; hydrolase, beta-p 97.5 0.0012 4.1E-08 66.0 13.2 125 63-195 378-550 (592)
266 4gga_A P55CDC, cell division c 97.4 0.017 5.9E-07 55.6 21.1 217 66-318 145-388 (420)
267 2ad6_A Methanol dehydrogenase 97.4 0.081 2.8E-06 53.5 26.7 42 352-395 483-525 (571)
268 4gga_A P55CDC, cell division c 97.4 0.1 3.5E-06 50.0 27.7 81 229-312 251-338 (420)
269 2pm7_B Protein transport prote 97.4 0.042 1.4E-06 50.1 22.3 186 71-314 56-274 (297)
270 3bg1_A Protein SEC13 homolog; 97.4 0.032 1.1E-06 51.4 21.4 190 70-313 59-281 (316)
271 3v7d_B Cell division control p 97.3 0.025 8.5E-07 54.9 20.8 146 75-280 275-420 (464)
272 2ad6_A Methanol dehydrogenase 97.3 0.11 3.7E-06 52.6 25.6 118 79-243 62-189 (571)
273 3c5m_A Oligogalacturonate lyas 97.3 0.044 1.5E-06 51.5 21.3 115 134-281 191-329 (396)
274 1z68_A Fibroblast activation p 97.3 0.002 6.8E-08 66.9 12.7 135 71-268 18-187 (719)
275 2wg3_C Hedgehog-interacting pr 97.2 0.009 3.1E-07 58.9 16.7 158 131-310 14-237 (463)
276 3mmy_A MRNA export factor; mRN 97.2 0.026 9.1E-07 52.2 19.2 220 69-313 87-334 (368)
277 2j04_A TAU60, YPL007P, hypothe 97.2 0.22 7.6E-06 50.1 30.4 175 69-283 16-213 (588)
278 2hes_X YDR267CP; beta-propelle 97.2 0.15 5E-06 47.2 24.7 155 70-280 16-183 (330)
279 4a5s_A Dipeptidyl peptidase 4 97.2 0.013 4.6E-07 61.1 17.8 138 72-268 20-189 (740)
280 3f3f_A Nucleoporin SEH1; struc 97.1 0.055 1.9E-06 49.3 20.1 114 69-194 111-236 (351)
281 1p22_A F-BOX/WD-repeat protein 97.1 0.2 6.9E-06 48.1 26.8 143 75-280 138-284 (435)
282 3vu4_A KMHSV2; beta-propeller 97.0 0.14 4.9E-06 47.9 22.1 72 178-282 197-272 (355)
283 4ggc_A P55CDC, cell division c 97.0 0.097 3.3E-06 47.3 20.3 215 66-316 65-306 (318)
284 2oaj_A Protein SNI1; WD40 repe 96.9 0.052 1.8E-06 58.1 20.4 154 71-280 61-241 (902)
285 2oit_A Nucleoporin 214KDA; NH2 96.9 0.024 8.2E-07 55.3 16.3 157 71-280 95-277 (434)
286 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.33 1.1E-05 46.6 29.9 142 76-280 125-267 (445)
287 2gop_A Trilobed protease; beta 96.9 0.055 1.9E-06 50.1 17.5 116 153-312 44-187 (347)
288 2xbg_A YCF48-like protein; pho 96.8 0.3 1E-05 45.3 25.3 97 72-195 83-181 (327)
289 1kb0_A Quinohemoprotein alcoho 96.8 0.59 2E-05 48.2 26.7 40 353-394 497-537 (677)
290 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.41 1.4E-05 46.0 30.0 145 71-280 162-307 (445)
291 3iuj_A Prolyl endopeptidase; h 96.8 0.39 1.3E-05 49.6 24.8 54 230-284 259-317 (693)
292 1yr2_A Prolyl oligopeptidase; 96.7 0.15 5.3E-06 53.0 21.6 116 135-282 213-351 (741)
293 2hz6_A Endoplasmic reticulum t 96.7 0.0038 1.3E-07 59.6 8.3 142 73-280 4-148 (369)
294 1p22_A F-BOX/WD-repeat protein 96.7 0.48 1.6E-05 45.4 24.4 148 71-280 176-324 (435)
295 2xdw_A Prolyl endopeptidase; a 96.6 0.12 4.2E-06 53.4 19.9 79 231-309 152-247 (710)
296 2bkl_A Prolyl endopeptidase; m 96.6 0.14 4.7E-06 52.9 19.8 124 154-308 96-240 (695)
297 1w6s_A Methanol dehydrogenase 96.6 0.79 2.7E-05 46.5 26.2 43 351-395 491-534 (599)
298 1yiq_A Quinohemoprotein alcoho 96.5 0.46 1.6E-05 49.1 23.1 43 351-395 493-536 (689)
299 2xbg_A YCF48-like protein; pho 96.5 0.53 1.8E-05 43.6 23.9 183 71-315 38-225 (327)
300 2bkl_A Prolyl endopeptidase; m 96.5 0.46 1.6E-05 48.9 23.0 152 72-281 171-351 (695)
301 3gre_A Serine/threonine-protei 96.5 0.11 3.8E-06 49.7 17.1 150 76-281 178-359 (437)
302 1yr2_A Prolyl oligopeptidase; 96.2 0.25 8.4E-06 51.5 19.2 77 230-308 189-281 (741)
303 1tl2_A L10, protein (tachylect 96.2 0.054 1.8E-06 47.5 11.6 105 133-276 43-158 (236)
304 1kv9_A Type II quinohemoprotei 96.1 1.5 5.1E-05 45.0 27.4 48 354-405 438-486 (668)
305 1w6s_A Methanol dehydrogenase 96.1 1.4 4.9E-05 44.6 27.9 50 352-405 451-501 (599)
306 1flg_A Protein (quinoprotein e 96.1 0.68 2.3E-05 46.8 21.2 43 351-395 504-547 (582)
307 2j04_B YDR362CP, TAU91; beta p 96.1 0.087 3E-06 52.7 14.3 194 71-318 210-421 (524)
308 1kb0_A Quinohemoprotein alcoho 96.0 0.84 2.9E-05 47.0 22.0 82 229-315 456-540 (677)
309 3zwu_A Alkaline phosphatase PH 96.0 0.072 2.5E-06 53.9 13.3 123 65-194 380-549 (592)
310 3iuj_A Prolyl endopeptidase; h 95.9 0.68 2.3E-05 47.7 20.8 110 134-281 237-359 (693)
311 2w18_A PALB2, fancn, partner a 95.9 0.97 3.3E-05 42.5 19.5 50 229-279 304-355 (356)
312 4gq1_A NUP37; propeller, trans 95.8 0.94 3.2E-05 42.8 20.0 72 71-163 139-220 (393)
313 2j04_B YDR362CP, TAU91; beta p 95.8 0.07 2.4E-06 53.4 12.4 154 70-281 268-428 (524)
314 1yiq_A Quinohemoprotein alcoho 95.7 0.96 3.3E-05 46.7 20.7 81 230-315 455-538 (689)
315 4ggc_A P55CDC, cell division c 95.4 1.4 4.9E-05 39.3 28.9 51 229-279 171-228 (318)
316 1kv9_A Type II quinohemoprotei 95.3 2.6 8.8E-05 43.3 22.1 82 229-315 437-521 (668)
317 2oit_A Nucleoporin 214KDA; NH2 95.0 2.1 7.2E-05 41.3 19.6 105 69-193 150-257 (434)
318 3vu4_A KMHSV2; beta-propeller 94.9 2.3 8E-05 39.4 25.4 181 69-317 20-218 (355)
319 4gq1_A NUP37; propeller, trans 94.4 1.7 5.8E-05 41.0 16.9 52 228-281 337-389 (393)
320 1flg_A Protein (quinoprotein e 94.1 5.5 0.00019 40.1 23.9 83 228-315 464-549 (582)
321 1k3i_A Galactose oxidase precu 92.9 7.6 0.00026 39.5 19.8 71 74-167 248-329 (656)
322 2xe4_A Oligopeptidase B; hydro 92.5 4.8 0.00016 41.8 17.8 76 230-307 201-283 (751)
323 2hz6_A Endoplasmic reticulum t 92.3 0.087 3E-06 50.0 3.8 49 230-280 19-67 (369)
324 1xip_A Nucleoporin NUP159; bet 91.8 6.1 0.00021 37.6 16.1 134 68-268 87-232 (388)
325 3a0f_A Xyloglucanase; beta-pro 90.0 20 0.00068 37.3 24.8 114 70-194 22-152 (763)
326 1sqj_A OXG-RCBH, oligoxylogluc 89.2 23 0.0008 36.9 22.8 108 71-194 17-140 (789)
327 2cn3_A Xyloglucanase, beta-1,4 87.5 29 0.00098 35.8 24.9 108 71-194 25-151 (737)
328 1xip_A Nucleoporin NUP159; bet 85.9 16 0.00055 34.6 14.3 153 70-282 39-192 (388)
329 3a0f_A Xyloglucanase; beta-pro 84.9 19 0.00065 37.4 15.6 158 73-280 592-761 (763)
330 1k3i_A Galactose oxidase precu 84.9 8.7 0.0003 39.0 12.8 114 133-280 188-322 (656)
331 3ii7_A Kelch-like protein 7; p 83.4 24 0.00082 31.4 16.2 74 142-246 149-232 (306)
332 2cn3_A Xyloglucanase, beta-1,4 82.2 32 0.0011 35.5 15.8 65 131-195 23-92 (737)
333 2be1_A Serine/threonine-protei 81.0 5.2 0.00018 37.3 8.4 17 82-98 12-28 (339)
334 2w18_A PALB2, fancn, partner a 79.6 40 0.0014 31.4 21.3 155 134-317 184-349 (356)
335 4asc_A Kelch repeat and BTB do 79.5 34 0.0012 30.6 14.6 74 142-246 148-228 (315)
336 3sbq_A Nitrous-oxide reductase 77.4 3.8 0.00013 40.9 6.4 88 231-318 299-401 (638)
337 1sqj_A OXG-RCBH, oligoxylogluc 77.1 37 0.0013 35.4 14.4 65 130-194 14-83 (789)
338 2vpj_A Kelch-like protein 12; 73.1 49 0.0017 29.1 17.1 74 142-246 159-238 (301)
339 2xn4_A Kelch-like protein 2; s 71.0 55 0.0019 28.8 17.8 74 142-246 155-236 (302)
340 2woz_A Kelch repeat and BTB do 67.5 68 0.0023 28.5 15.8 74 142-246 158-238 (318)
341 1zgk_A Kelch-like ECH-associat 66.6 70 0.0024 28.3 23.8 105 142-280 70-192 (308)
342 1zgk_A Kelch-like ECH-associat 65.0 75 0.0026 28.1 15.8 105 142-280 121-239 (308)
343 2xe4_A Oligopeptidase B; hydro 61.4 1.5E+02 0.0051 30.4 25.5 49 229-279 344-398 (751)
344 2zwa_A Leucine carboxyl methyl 60.9 1.5E+02 0.0051 30.2 16.3 59 135-194 494-557 (695)
345 2uvk_A YJHT; unknown function, 57.8 1.1E+02 0.0037 27.6 15.0 51 142-195 65-126 (357)
346 3ii7_A Kelch-like protein 7; p 56.9 1E+02 0.0035 27.1 26.0 106 142-280 55-177 (306)
347 2vpj_A Kelch-like protein 12; 53.9 1.1E+02 0.0038 26.6 23.4 105 142-280 112-230 (301)
348 2be1_A Serine/threonine-protei 52.3 26 0.00088 32.5 6.4 23 142-164 10-32 (339)
349 4asc_A Kelch repeat and BTB do 51.1 1.3E+02 0.0044 26.5 26.1 96 154-280 69-173 (315)
350 3f6k_A Sortilin; protein sorti 48.6 1.4E+02 0.0047 30.5 11.7 53 143-195 56-110 (685)
351 2zwa_A Leucine carboxyl methyl 43.4 2.8E+02 0.0094 28.1 14.9 108 142-282 451-578 (695)
352 2uvk_A YJHT; unknown function, 39.3 2.1E+02 0.0072 25.6 19.1 81 142-247 19-103 (357)
353 2woz_A Kelch repeat and BTB do 34.8 2.3E+02 0.008 24.8 24.1 107 142-280 56-183 (318)
354 2xn4_A Kelch-like protein 2; s 31.9 2.5E+02 0.0086 24.3 25.0 105 142-280 61-181 (302)
355 3al9_A Plexin-A2; beta-propell 31.8 3.3E+02 0.011 26.7 11.1 84 72-157 21-109 (539)
356 2xzh_A Clathrin heavy chain 1; 26.8 3.8E+02 0.013 24.8 9.9 38 128-165 257-294 (365)
357 3al9_A Plexin-A2; beta-propell 23.9 2E+02 0.007 28.3 8.0 68 73-160 404-479 (539)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=3.7e-32 Score=259.17 Aligned_cols=295 Identities=34% Similarity=0.635 Sum_probs=222.0
Q ss_pred ccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCc-cccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 64 FLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRS-ELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 64 ~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
..+++.+||++++|++|+++|+++.+++|++++.+ .++.+........ ..|.+... ......+++|.||++++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTD----AEKRPLCGRTYDISYNL 89 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCC----GGGHHHHCCEEEEEEET
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccc----hhccccCCCCceEEEcC
Confidence 34678899999999999889999999999999876 4555543211000 01111000 01112356799999995
Q ss_pred CCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 141 KTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 141 ~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
++|+|||++...+|+++|+++++++.+.....+.++..|+++++|+ +|++|+++....+..+++ ...+++
T Consensus 90 ~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~------~~~~~~--- 160 (322)
T 2fp8_A 90 QNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV------QQIMDT--- 160 (322)
T ss_dssp TTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH------HHHHHH---
T ss_pred CCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccc------ceehcc---
Confidence 4789999998889999999887766665544555677899999999 999999997533322222 222333
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
....|+|+++|+++++.+.+...+..|+||++++|++.+|++++..++|++|++++...+..+.+.+++| |++
T Consensus 161 ------~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~g 233 (322)
T 2fp8_A 161 ------SDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGN 233 (322)
T ss_dssp ------TCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEE
T ss_pred ------cCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCC
Confidence 3456889999999898888777888999999999999999999988999999998766666677777778 999
Q ss_pred eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeec
Q 015463 300 VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKA 379 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~ 379 (406)
+++|++|++||+....+..+ +.. ...+.++++|++|+.+..+..++|..+..
T Consensus 234 i~~d~~G~l~va~~~~~~~~-----------------~~~-----------~~~~~v~~~d~~G~~~~~~~~~~g~~~~~ 285 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGN-----------------MHG-----------RVDPKGIKFDEFGNILEVIPLPPPFAGEH 285 (322)
T ss_dssp EEECTTSCEEEEEEEETTSS-----------------TTS-----------CEEEEEEEECTTSCEEEEEECCTTTTTSC
T ss_pred eEECCCCCEEEEecCccccc-----------------ccC-----------CCccEEEEECCCCCEEEEEECCCCCcccc
Confidence 99999999999986532211 000 12346899999999999998888765566
Q ss_pred eeEEEEeCCEEEEecCCCCeEEEEeCC
Q 015463 380 ISEVEEKDGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 380 ~s~~~~~~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
++.+...+|+||+++..+++|.++++.
T Consensus 286 ~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 286 FEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred ceEEEEeCCEEEEeecCCCceEEEecc
Confidence 777777899999999999999999863
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.96 E-value=1.1e-26 Score=222.65 Aligned_cols=279 Identities=18% Similarity=0.222 Sum_probs=197.0
Q ss_pred cCcccCcceEEEcCCCCeeEEEe-------------cCCEEEEEeCC----ceeEEEeecCCCccccCCCCCcccccccC
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGV-------------ADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNE 127 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~-------------~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (406)
++...|||+|+++++|. +|+++ .+|+|++++.+ +.+++..... ...
T Consensus 46 ~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~----------------~~~ 108 (355)
T 3sre_A 46 KGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN----------------TLD 108 (355)
T ss_dssp TTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS----------------SCC
T ss_pred CCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC----------------CCC
Confidence 44357999999999886 89997 68999999975 3333332210 011
Q ss_pred CcCCcceEEEEeCC-CC--cEEEEeCCC-----cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCch
Q 015463 128 HICGRPLGLRFDKK-TG--DLYIADAYF-----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNY 199 (406)
Q Consensus 128 ~~~~~p~gi~~d~~-~g--~L~Vad~~~-----gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~ 199 (406)
....+|+||.+..+ +| +|||+++.. +|++++++++.... .....+.+++.+|+++++++|.+|+++... +
T Consensus 109 ~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~-~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-f 186 (355)
T 3sre_A 109 ISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH-LKTIRHKLLPSVNDIVAVGPEHFYATNDHY-F 186 (355)
T ss_dssp GGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE-EEEECCTTCSSEEEEEEEETTEEEEEESCS-C
T ss_pred cCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE-EeccccCCCCCCceEEEeCCCCEEecCCcE-e
Confidence 12468999998552 34 699998864 39999998775444 445567789999999999999999998531 0
Q ss_pred hhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 015463 200 QRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 279 (406)
Q Consensus 200 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~ 279 (406)
....+ ...+.++ ..+.|+|++||+. +++++.+++..||||+++||++.+|++++..++|++|++
T Consensus 187 td~~~-----~~~e~~~---------~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 187 IDPYL-----KSWEMHL---------GLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp SSHHH-----HHHHHHT---------TCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CCccc-----ccchhhc---------cCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 00000 0011111 3456899999994 677788999999999999999999999999999999999
Q ss_pred eCC-CCcceeeeecCCCCCCceEECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEE
Q 015463 280 IGE-KAGNLEAFAILPGYPDNVRTNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAV 357 (406)
Q Consensus 280 ~g~-~~~~~~~~~~l~g~pd~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~ 357 (406)
+.. +.+..++| +++|.|||+++|+ +|++|++...+... +.++.... .....+.
T Consensus 251 ~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~--------------v~~~~P~~----------~~~s~v~ 305 (355)
T 3sre_A 251 HANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMR--------------IFFYDAEN----------PPGSEVL 305 (355)
T ss_dssp CTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHH--------------HHSCCTTS----------CCCEEEE
T ss_pred CCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceE--------------EEEECCCC----------CCCCEEE
Confidence 742 33444556 6789999999999 59999987532111 11111100 0112355
Q ss_pred EEC----CCCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 358 KYS----PEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 358 ~~d----~~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
++. +++++...|.+ +|+.+...|.+.+.+|+||+||+..+ +..|+|
T Consensus 306 rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 306 RIQDILSEEPKVTVVYAE-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEECTTSSSCEEEEEEEE-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEEccCCCCcEEEEEEEc-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 554 57888889987 89888888888899999999999888 555654
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.94 E-value=1.8e-24 Score=204.23 Aligned_cols=258 Identities=17% Similarity=0.229 Sum_probs=191.3
Q ss_pred cceeccCcccCcceEEEcCCCC-eeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEE
Q 015463 60 SEIKFLNQIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (406)
Q Consensus 60 ~~~~~~~~~~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 137 (406)
.+++. .++..+|+++++++|+ ++|+++.+++|++++.+ +.+.+... .+.|.+++
T Consensus 37 ~~~l~-~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~-----------------------~~~~~gl~ 92 (305)
T 3dr2_A 37 LLTLY-DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDA-----------------------TAFTNGNA 92 (305)
T ss_dssp CEEEE-CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEES-----------------------CSCEEEEE
T ss_pred eEEEe-cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCC-----------------------CCccceee
Confidence 34443 4577899999999998 78899999999999876 44444321 24589999
Q ss_pred EeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 138 FDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 138 ~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
+++ +|+||+++.. ++|.+++++ ++++.+.....+.+++.+++++++++|++|++|+..+... ++ ++. ....
T Consensus 93 ~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~-~~--~~~--~~~~- 164 (305)
T 3dr2_A 93 VDA-QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK-PS--QGC--PADP- 164 (305)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC-GG--GSC--CCCC-
T ss_pred ECC-CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc-cc--ccc--cccc-
Confidence 999 8999999976 689999997 6666665555566678899999999999999986321100 00 000 0000
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC-----CeEEEEEeeCCCCcceeeee
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-----GRLHKYWLIGEKAGNLEAFA 291 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~-----~~i~~~~~~g~~~~~~~~~~ 291 (406)
....++|+++|+++++++.+. .+..++|+++++|++.+|++++.. ++|++|++++......+.+.
T Consensus 165 ---------~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 165 ---------ELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp ---------SSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred ---------ccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 122467999999888887777 778899999999999999999863 79999998754333344555
Q ss_pred c-CCCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEE
Q 015463 292 I-LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLE 370 (406)
Q Consensus 292 ~-l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 370 (406)
+ ..+.|+++++|++|++|+++..+ |.+|+++|+.+..+.
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~~~~g----------------------------------------v~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSSSGTG----------------------------------------VCVFDSDGQLLGHIP 274 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEECCSSE----------------------------------------EEEECTTSCEEEEEE
T ss_pred ECCCCCCCeEEECCCCCEEEecCCc----------------------------------------EEEECCCCCEEEEEE
Confidence 4 46789999999999999998332 788999999998887
Q ss_pred CCCCCeeeceeEEEE--eCCEEEEecCCCCeEEEEeCC
Q 015463 371 DSKGKVVKAISEVEE--KDGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 371 ~~~g~~~~~~s~~~~--~~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
.+.+ ++.+.. .++.||+++ ...+++++++
T Consensus 275 ~~~~-----~~~~~f~~d~~~L~it~--~~~l~~~~~~ 305 (305)
T 3dr2_A 275 TPGT-----ASNCTFDQAQQRLFITG--GPCLWMLPLP 305 (305)
T ss_dssp CSSC-----CCEEEECTTSCEEEEEE--TTEEEEEECC
T ss_pred CCCc-----eeEEEEeCCCCEEEEEc--CCeEEEEECC
Confidence 6543 222322 446899998 4789998874
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=2e-23 Score=195.77 Aligned_cols=253 Identities=18% Similarity=0.241 Sum_probs=186.7
Q ss_pred cCcccCcceEEEcCCCC-eeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 65 LNQIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
..++..||+++++++|+ ++|+++.+++|++++.+ ..+.+.. ..+.|.+|++++ +
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~l~~~~-d 79 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMH-----------------------PSHHQNGHCLNK-Q 79 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEES-----------------------SCSSEEEEEECT-T
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEEC-----------------------CCCCcceeeECC-C
Confidence 34678899999999998 88999999999999987 4333321 135689999999 8
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCC
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPS 221 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (406)
|+||+++.. .+|+++|+++++++.+.....+.+...+++++++++|++|++++..+... .+ ++ .....
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~-~~--~~--~~~~~------ 148 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDK-PE--EG--YGGEM------ 148 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHC-GG--GS--SCCCC------
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccc-cc--cc--ccccc------
Confidence 999999976 68999999888877665444455567899999999999999986311100 00 00 00000
Q ss_pred CCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC-CCC-cceeeeecCCCCCCc
Q 015463 222 PIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG-EKA-GNLEAFAILPGYPDN 299 (406)
Q Consensus 222 ~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g-~~~-~~~~~~~~l~g~pd~ 299 (406)
....++|++++++ ++.+.+...+..++++++++|++.+ ++++..++|++|+++. .+. ...+.+....+.|++
T Consensus 149 ----~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 149 ----ELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp ----CSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred ----cCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 1124689999998 7777777788889999999999988 9999889999999862 222 223444224578999
Q ss_pred eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeec
Q 015463 300 VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKA 379 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~ 379 (406)
+++|++|++||+. .+ .|.+++++|+.+..+..+.+
T Consensus 223 i~~d~~G~l~v~~-~~---------------------------------------~v~~~~~~g~~~~~~~~~~~----- 257 (296)
T 3e5z_A 223 LRVDAGGLIWASA-GD---------------------------------------GVHVLTPDGDELGRVLTPQT----- 257 (296)
T ss_dssp EEEBTTSCEEEEE-TT---------------------------------------EEEEECTTSCEEEEEECSSC-----
T ss_pred EEECCCCCEEEEc-CC---------------------------------------eEEEECCCCCEEEEEECCCC-----
Confidence 9999999999999 32 27889999999988876554
Q ss_pred eeEEEE--eC-CEEEEecCCCCeEEEEeC
Q 015463 380 ISEVEE--KD-GKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 380 ~s~~~~--~~-g~Ly~Gs~~~~~i~~~~~ 405 (406)
++.+.. .+ ++||+++ .+++.++++
T Consensus 258 ~~~~~f~~~d~~~L~v~t--~~~l~~~~~ 284 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTV--STEFWSIET 284 (296)
T ss_dssp CCEEEEESTTSCEEEEEE--TTEEEEEEC
T ss_pred ceeEEEECCCCCEEEEEc--CCeEEEEEc
Confidence 223322 23 5899998 478999886
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.91 E-value=2.7e-22 Score=188.70 Aligned_cols=247 Identities=14% Similarity=0.185 Sum_probs=180.0
Q ss_pred cceeccCcccCcceEEEcCC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEE
Q 015463 60 SEIKFLNQIQGPESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL 136 (406)
Q Consensus 60 ~~~~~~~~~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 136 (406)
.+.+......-+|+++++++ +.++|++..+++|++++.+ ....+. ....|.++
T Consensus 4 ~~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~------------------------~~~~~~~i 59 (297)
T 3g4e_A 4 IECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT------------------------MDAPVSSV 59 (297)
T ss_dssp EEEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE------------------------CSSCEEEE
T ss_pred EEEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe------------------------CCCceEEE
Confidence 35556677889999999984 6677888899999999987 222221 02458899
Q ss_pred EEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 137 RFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 137 ~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
++++ +|+||+++ ..+|+++|+++++++.+.....+.+...++++++|++|++|+++...... ....
T Consensus 60 ~~~~-dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~-----------~~~~- 125 (297)
T 3g4e_A 60 ALRQ-SGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA-----------PAVL- 125 (297)
T ss_dssp EEBT-TSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB-----------TTBC-
T ss_pred EECC-CCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc-----------cccc-
Confidence 9998 88999998 57999999999988776654444556789999999999999998431100 0000
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee--CCCCcceeeeecC-
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI--GEKAGNLEAFAIL- 293 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~--g~~~~~~~~~~~l- 293 (406)
....++|++++++ ++...+...+..+||+++++|++.+|++++..++|++|+++ .......+++.+.
T Consensus 126 ---------~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 126 ---------ERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp ---------CTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred ---------cCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 1235789999986 56666677778899999999999999999988999999974 2222233455443
Q ss_pred --CCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCC-CCEEEEEE
Q 015463 294 --PGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQVLE 370 (406)
Q Consensus 294 --~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~ 370 (406)
.+.|+++++|++|++||+...+. .|.++|++ |+.+..+.
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~~--------------------------------------~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNGG--------------------------------------RVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETTT--------------------------------------EEEEECTTTCCEEEEEE
T ss_pred CCCCCCCeeEECCCCCEEEEEcCCC--------------------------------------EEEEEcCCCceEEEEEE
Confidence 46899999999999999986541 27778887 88877776
Q ss_pred CCCCCeeeceeEEEEe---CCEEEEecCC
Q 015463 371 DSKGKVVKAISEVEEK---DGKLWMGSVL 396 (406)
Q Consensus 371 ~~~g~~~~~~s~~~~~---~g~Ly~Gs~~ 396 (406)
.+.. .++.+... .++||+++-.
T Consensus 238 ~p~~----~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 238 LPVD----KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CSSS----BEEEEEEESGGGCEEEEEEBC
T ss_pred CCCC----CceEEEEeCCCCCEEEEEcCC
Confidence 5432 23444432 3588888753
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.90 E-value=2.4e-21 Score=182.22 Aligned_cols=260 Identities=22% Similarity=0.301 Sum_probs=182.1
Q ss_pred cCcccCcceEEEcCCCCeeEEE--------ecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcce
Q 015463 65 LNQIQGPESMAFDPLGRGPYTG--------VADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL 134 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g--------~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 134 (406)
..++..||+++++++|+ +|++ +.+++|++++.. ++..+.... .....+.|.
T Consensus 14 ~~~~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~------------------~~~~~~~~~ 74 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPE------------------VNGYGGIPA 74 (314)
T ss_dssp ECCCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEECCE------------------ETTEECCEE
T ss_pred hccCCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecc------------------cCCCCCCCc
Confidence 55688999999999998 5655 778999999864 444442200 001135689
Q ss_pred EEEEeCCC-CcEEEEeCCCcEEEEeCCCCeEEEc-ccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccc
Q 015463 135 GLRFDKKT-GDLYIADAYFGLMKVGPEGGLATSL-ATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQ 212 (406)
Q Consensus 135 gi~~d~~~-g~L~Vad~~~gl~~~d~~~~~~~~l-~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~ 212 (406)
++++++ + |+|||++...+|+++|++ ++++.+ .....+.+...++++++|++|++|+++........++ .
T Consensus 75 ~i~~~~-~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~------~- 145 (314)
T 1pjx_A 75 GCQCDR-DANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY------T- 145 (314)
T ss_dssp EEEECS-SSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC------C-
T ss_pred eEEEec-CCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc------c-
Confidence 999998 6 999999987899999998 777665 4333334456799999999999999986321000000 0
Q ss_pred ccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEe----cCCCEEEEEeCCCCeEEEEEeeC-CCCcce
Q 015463 213 LCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLS----KDKSFFVFCEGSVGRLHKYWLIG-EKAGNL 287 (406)
Q Consensus 213 ~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~----~d~~~l~v~~t~~~~i~~~~~~g-~~~~~~ 287 (406)
... ....++|+++|++ ++.+.+......+++++++ +|++.+|++++..++|++|++++ .+....
T Consensus 146 -~~~---------~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~ 214 (314)
T 1pjx_A 146 -RSM---------QEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK 214 (314)
T ss_dssp -BTT---------SSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE
T ss_pred -ccc---------cCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc
Confidence 000 1234689999998 7777666666788999999 99989999998889999999762 222222
Q ss_pred eeeecCC----CCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCC-
Q 015463 288 EAFAILP----GYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPE- 362 (406)
Q Consensus 288 ~~~~~l~----g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~- 362 (406)
+.+...+ +.|+++++|++|++|++..... .|.++|++
T Consensus 215 ~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~--------------------------------------~i~~~d~~~ 256 (314)
T 1pjx_A 215 KVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS--------------------------------------HIEVFGPDG 256 (314)
T ss_dssp EEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT--------------------------------------EEEEECTTC
T ss_pred eEEEECCCCCCCCCCceEECCCCCEEEEEcCCC--------------------------------------EEEEEcCCC
Confidence 3444433 5689999999999999985431 27778888
Q ss_pred CCEEEEEECCCCCeeeceeEEEE-eCCE-EEEecCCCCeEEEEeC
Q 015463 363 GKILQVLEDSKGKVVKAISEVEE-KDGK-LWMGSVLMPFVAVYDL 405 (406)
Q Consensus 363 g~~~~~~~~~~g~~~~~~s~~~~-~~g~-Ly~Gs~~~~~i~~~~~ 405 (406)
|+.+..+..+.. .++.+.. .+|+ ||+++...+.|.++++
T Consensus 257 g~~~~~~~~~~~----~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 257 GQPKMRIRCPFE----KPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp BSCSEEEECSSS----CEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CcEeEEEeCCCC----CceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 777666654322 3444443 3554 9999987789999875
No 7
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=1.7e-19 Score=172.01 Aligned_cols=243 Identities=19% Similarity=0.169 Sum_probs=176.0
Q ss_pred ccceeccCcccCcceEEEcCC-CCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceE
Q 015463 59 NSEIKFLNQIQGPESMAFDPL-GRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLG 135 (406)
Q Consensus 59 ~~~~~~~~~~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 135 (406)
+.+.++......+|+++++++ +.++|+++.+++|++++.+ . .+.+. . ...|.+
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~-----------------------~~~v~~ 94 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-L-----------------------PFMGSA 94 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-C-----------------------SSCEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-C-----------------------CCcceE
Confidence 456777777778999999986 5577888889999999976 2 22221 0 134788
Q ss_pred EEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 136 LRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 136 i~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+++++ +|++||++ ..||+++|+++++++.+.....+.+...++++++|++|++|+++.....
T Consensus 95 i~~~~-dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~---------------- 156 (326)
T 2ghs_A 95 LAKIS-DSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA---------------- 156 (326)
T ss_dssp EEEEE-TTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC----------------
T ss_pred EEEeC-CCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC----------------
Confidence 99998 89999998 4689999999888776543322334457899999999999998742100
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee--CC-CCcceeeeec
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI--GE-KAGNLEAFAI 292 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~--g~-~~~~~~~~~~ 292 (406)
....++|++++ +++.+.+......++++++++|++.+|++++..++|++++++ +. .....+.+..
T Consensus 157 ----------~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 157 ----------ETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp ----------CTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred ----------CCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE
Confidence 11246899999 477777666667789999999999999999888899999975 22 2222344443
Q ss_pred ---CCCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEE
Q 015463 293 ---LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVL 369 (406)
Q Consensus 293 ---l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~ 369 (406)
..+.|+++++|++|++|+++.... .|.+++++|+.+..+
T Consensus 225 ~~~~~~~p~gi~~d~~G~lwva~~~~~--------------------------------------~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGHIWNARWGEG--------------------------------------AVDRYDTDGNHIARY 266 (326)
T ss_dssp CTTSSSEEEEEEECTTSCEEEEEETTT--------------------------------------EEEEECTTCCEEEEE
T ss_pred CCCCCCCCCeeEECCCCCEEEEEeCCC--------------------------------------EEEEECCCCCEEEEE
Confidence 346799999999999999985431 277888888887777
Q ss_pred ECCCCCeeeceeEEEEe--C-CEEEEecCCC
Q 015463 370 EDSKGKVVKAISEVEEK--D-GKLWMGSVLM 397 (406)
Q Consensus 370 ~~~~g~~~~~~s~~~~~--~-g~Ly~Gs~~~ 397 (406)
..+.. .++++... + ++||+++...
T Consensus 267 ~~~~~----~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 267 EVPGK----QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ECSCS----BEEEEEEESTTSCEEEEEEBCT
T ss_pred ECCCC----CcEEEEEecCCCCEEEEEecCC
Confidence 65432 34444432 3 5899987654
No 8
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=3.5e-19 Score=169.16 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=175.3
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
......||+++++++|+++++++.+++|++++.+ .++.+... ....|.+|++++ +
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------~~~~~~~i~~~~-d 97 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS----------------------HKANPAAIKIHK-D 97 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC----------------------SSSSEEEEEECT-T
T ss_pred eccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC----------------------CCCCcceEEECC-C
Confidence 3456789999999999955568888999999876 33333211 124588999998 8
Q ss_pred CcEEEEeCCC-----cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 143 GDLYIADAYF-----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 143 g~L~Vad~~~-----gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
|+|||++... +|+++|++++..+.+.... .....+++++++++|++|+++.....
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~------------------ 157 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYS------------------ 157 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCBT------------------
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC--ccCCcccceEECCCCCEEEEeccccc------------------
Confidence 9999998765 8999999988765332211 12356889999999999999853100
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC--CCCcc--eeeeecC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG--EKAGN--LEAFAIL 293 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g--~~~~~--~~~~~~l 293 (406)
....++|+++|+++++.+.+......++++++++|++.+|++++..++|++|+++. ..... ...+...
T Consensus 158 --------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~ 229 (333)
T 2dg1_A 158 --------TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF 229 (333)
T ss_dssp --------TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC
T ss_pred --------cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec
Confidence 12246799999988777776666667899999999999999988778999999852 11111 1222223
Q ss_pred C--CCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEEC
Q 015463 294 P--GYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLED 371 (406)
Q Consensus 294 ~--g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 371 (406)
. ..|+++++|++|++|+++.... .|.++|++|+.+..+..
T Consensus 230 ~~~~~~~~i~~d~~G~l~v~~~~~~--------------------------------------~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 230 TGHEGPDSCCIDSDDNLYVAMYGQG--------------------------------------RVLVFNKRGYPIGQILI 271 (333)
T ss_dssp CSSSEEEEEEEBTTCCEEEEEETTT--------------------------------------EEEEECTTSCEEEEEEC
T ss_pred CCCCCCCceEECCCCCEEEEEcCCC--------------------------------------EEEEECCCCCEEEEEEc
Confidence 3 3689999999999999985421 26778888888887764
Q ss_pred CCCC--eeeceeEEEE-eC-CEEEEecCCC-----CeEEEEeC
Q 015463 372 SKGK--VVKAISEVEE-KD-GKLWMGSVLM-----PFVAVYDL 405 (406)
Q Consensus 372 ~~g~--~~~~~s~~~~-~~-g~Ly~Gs~~~-----~~i~~~~~ 405 (406)
+... ....++.+.. .+ ++||+++... ..|.++++
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 4210 0112333333 34 5899988653 26777764
No 9
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.84 E-value=9.2e-19 Score=165.33 Aligned_cols=185 Identities=20% Similarity=0.160 Sum_probs=139.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..||+++++++|+++++...+++|++++.+ ....+.. ..+.|.||++++ +|+|||
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-----------------------~~~~p~gia~~~-dG~l~v 87 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-----------------------VEGKVSGLAFTS-NGDLVA 87 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-----------------------CSSEEEEEEECT-TSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-----------------------CCCCceeEEEcC-CCcEEE
Confidence 689999999999955556688999999987 4333221 135699999998 899999
Q ss_pred EeCC-C--cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 148 ADAY-F--GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 148 ad~~-~--gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
++.. + .|++++..+++++.+.... ...++++++..+++++|++++.
T Consensus 88 ad~~~~~~~v~~~d~~~g~~~~~~~~~---~~~~~~g~~~~~~~~~~v~d~~---------------------------- 136 (306)
T 2p4o_A 88 TGWNADSIPVVSLVKSDGTVETLLTLP---DAIFLNGITPLSDTQYLTADSY---------------------------- 136 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECT---TCSCEEEEEESSSSEEEEEETT----------------------------
T ss_pred EeccCCcceEEEEcCCCCeEEEEEeCC---CccccCcccccCCCcEEEEECC----------------------------
Confidence 9965 2 3999998888776654331 1345778888888889999853
Q ss_pred ccCCCCeEEEEeCCCCeEEEe-----------cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC-CCCcceeeeec
Q 015463 225 ITKDTGRVLKYDPTTKQTTVL-----------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG-EKAGNLEAFAI 292 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~-----------~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g-~~~~~~~~~~~ 292 (406)
.|+|+++|+.+++.++. ...+..+||| ++|++.+|++++..++|++|++++ .+.+..+.+..
T Consensus 137 ----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~ 210 (306)
T 2p4o_A 137 ----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE 210 (306)
T ss_dssp ----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE
T ss_pred ----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec
Confidence 37899999986643322 1345678998 889999999999999999999875 23344455554
Q ss_pred CCCCCCceEECCCCCEEEEEccC
Q 015463 293 LPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 293 l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
. ..|+++++|++|++||+....
T Consensus 211 ~-~~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 211 Q-TNIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp S-CCCSSEEEBTTCCEEEECBTT
T ss_pred c-CCCCCeEECCCCCEEEEeCCC
Confidence 4 469999999999999998654
No 10
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=1.4e-17 Score=154.63 Aligned_cols=244 Identities=16% Similarity=0.280 Sum_probs=169.0
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-ce-eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
.+++..|.+++++++|++++++..+++|.+++.+ .. ..+.... ........|.+++++..+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~-----------------~~~~~~~~p~~i~~~~~~ 88 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG-----------------KRDSQLLYPNRVAVVRNS 88 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS-----------------SSTTCBSSEEEEEEETTT
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC-----------------CCcccccCceEEEEEcCC
Confidence 4567899999999999944445778999999877 32 2221100 001113468999995338
Q ss_pred CcEEEEeC--CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 143 GDLYIADA--YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 143 g~L~Vad~--~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
|+|||++. ...|.++++++..+..+.. .....|++++++++|++|+++..
T Consensus 89 g~l~v~~~~~~~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~------------------------ 140 (286)
T 1q7f_A 89 GDIIVTERSPTHQIQIYNQYGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECK------------------------ 140 (286)
T ss_dssp TEEEEEECGGGCEEEEECTTSCEEEEECT----TTCSCEEEEEECTTSCEEEEETT------------------------
T ss_pred CeEEEEcCCCCCEEEEECCCCcEEEEecC----ccCCCceEEEEeCCCCEEEEECC------------------------
Confidence 99999995 4789999977655444321 23456899999999999999853
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC--CCC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL--PGY 296 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l--~g~ 296 (406)
.++|++||+++.....+. ..+..|+++++++|++ +|+++...++|.+|+.++. ....+... ...
T Consensus 141 --------~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~ 208 (286)
T 1q7f_A 141 --------VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNY 208 (286)
T ss_dssp --------TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---EEEEESCTTTSCS
T ss_pred --------CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---EEEEEccCCccCC
Confidence 367999998755555443 3456789999999886 8899887889999997542 11222211 145
Q ss_pred CCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCe
Q 015463 297 PDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKV 376 (406)
Q Consensus 297 pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~ 376 (406)
|.++++|++|++||+..... ..|..++++|+.+..+......
T Consensus 209 p~~i~~d~~G~l~v~~~~~~-------------------------------------~~i~~~~~~g~~~~~~~~~~~~- 250 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNN-------------------------------------FNLTIFTQDGQLISALESKVKH- 250 (286)
T ss_dssp EEEEEECTTCCEEEEECSSS-------------------------------------CEEEEECTTSCEEEEEEESSCC-
T ss_pred CcEEEECCCCCEEEEeCCCC-------------------------------------EEEEEECCCCCEEEEEcccCCC-
Confidence 88999999999999985431 1277789999988887643221
Q ss_pred eeceeEE-EEeCCEEEEecCCCCeEEEEeC
Q 015463 377 VKAISEV-EEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 377 ~~~~s~~-~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.....+ ...+|+||+.+. ++.|.++++
T Consensus 251 -~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 251 -AQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp -SCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred -CcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 123333 345789999975 678887764
No 11
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=1.4e-17 Score=152.88 Aligned_cols=233 Identities=21% Similarity=0.258 Sum_probs=163.5
Q ss_pred CcceEEEcCCCCeeEE-E-ecCCEEEEEeCCc-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 70 GPESMAFDPLGRGPYT-G-VADGRILFWDGLK-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~-g-~~~g~I~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
.|++++++++|+ +|+ + ..+++|++++... ..... . ......|.+|++++ +|+||
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~-~--------------------~~~~~~p~~i~~~~-~g~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVL-P--------------------FNGLYQPQGLAVDG-AGTVY 81 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EEC-C--------------------CCSCCSCCCEEECT-TCCEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceE-e--------------------eCCcCCcceeEECC-CCCEE
Confidence 999999999999 777 6 6778999998762 11110 0 01124688999998 78999
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
|++..++|+++|++++....+.. ..+..|.+++++++|++|+++..
T Consensus 82 v~~~~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~------------------------------ 127 (270)
T 1rwi_B 82 VTDFNNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG------------------------------ 127 (270)
T ss_dssp EEETTTEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG------------------------------
T ss_pred EEcCCCEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC------------------------------
Confidence 99986689999998876554321 12356889999999999999853
Q ss_pred CCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCceEECC
Q 015463 227 KDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNE 304 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i~~d~ 304 (406)
.++|++++..+...... ...+..+++++++++++ +|+++...++|.+++.++.. ..... .....|.++++|+
T Consensus 128 --~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~ 201 (270)
T 1rwi_B 128 --NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDE 201 (270)
T ss_dssp --GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECT
T ss_pred --CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECC
Confidence 26799998765544332 23456789999999987 89998877899999876432 11111 1114588999999
Q ss_pred CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeeceeEEE
Q 015463 305 KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVE 384 (406)
Q Consensus 305 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~~s~~~ 384 (406)
+|++|++..... .+.+++++++...... ..+ ......+.
T Consensus 202 ~g~l~v~~~~~~--------------------------------------~v~~~~~~~~~~~~~~-~~~--~~~p~~i~ 240 (270)
T 1rwi_B 202 AGTVYVTEHNTN--------------------------------------QVVKLLAGSTTSTVLP-FTG--LNTPLAVA 240 (270)
T ss_dssp TCCEEEEETTTS--------------------------------------CEEEECTTCSCCEECC-CCS--CSCEEEEE
T ss_pred CCCEEEEECCCC--------------------------------------cEEEEcCCCCcceeec-cCC--CCCceeEE
Confidence 999999986431 2677888876554432 122 12345554
Q ss_pred E-eCCEEEEecCCCCeEEEEeCC
Q 015463 385 E-KDGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 385 ~-~~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
. .+|+||++...++.|.++++.
T Consensus 241 ~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 241 VDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECCC
T ss_pred ECCCCCEEEEECCCCEEEEEcCC
Confidence 4 468999999989999998863
No 12
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.79 E-value=2.1e-16 Score=146.82 Aligned_cols=234 Identities=14% Similarity=0.191 Sum_probs=163.8
Q ss_pred CcccCcceEEEcCCCCeeEEEe-cCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYTGV-ADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
.....|++|++|++|+ +|++. .+++|.+++.+ .+..+... .....|.+|++++ +|
T Consensus 17 ~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~---------------------~~~~~~~~i~~~~-~g 73 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGK-VWFTQHKANKISSLDQSGRIKEFEVP---------------------TPDAKVMCLIVSS-LG 73 (300)
T ss_dssp STTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECS---------------------STTCCEEEEEECT-TS
T ss_pred CCCCCcceeeECCCCC-EEEEcCCCCeEEEECCCCceEEEECC---------------------CCCCcceeEEECC-CC
Confidence 4567999999999999 77766 57899999887 44433211 1135689999998 89
Q ss_pred cEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 144 DLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 144 ~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
++|+++.. ++|+++|++ ++...+.... ....+.+++++++|++|+++..
T Consensus 74 ~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-------------------------- 123 (300)
T 2qc5_A 74 DIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN-------------------------- 123 (300)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT--------------------------
T ss_pred CEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC--------------------------
Confidence 99999975 579999998 5555432211 1256889999999999999853
Q ss_pred CcccCCCCeEEEEeCCCCeEEEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee--cCCCCCC
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPGYPD 298 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~--~l~g~pd 298 (406)
.++|+++|++ ++...+. .....+++++++++++ +|+++...++|++++..+ ....+. .....|.
T Consensus 124 ------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~ 191 (300)
T 2qc5_A 124 ------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPV 191 (300)
T ss_dssp ------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEE
T ss_pred ------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcc
Confidence 2679999998 6665442 2456789999999987 889988778999998632 222222 1123578
Q ss_pred ceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeee
Q 015463 299 NVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVK 378 (406)
Q Consensus 299 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~ 378 (406)
++++|++|++|++..... .+.+++++|+..... .+.+. .
T Consensus 192 ~i~~d~~g~l~v~~~~~~--------------------------------------~i~~~~~~g~~~~~~-~~~~~--~ 230 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGN--------------------------------------KIGRITTTGEISEYD-IPTPN--A 230 (300)
T ss_dssp EEEECTTSSEEEEETTTT--------------------------------------EEEEECTTCCEEEEE-CSSTT--C
T ss_pred eEEECCCCCEEEEccCCC--------------------------------------EEEEEcCCCcEEEEE-CCCCC--C
Confidence 899999999999986431 266677776655432 22221 2
Q ss_pred ceeEEEE-eCCEEEEecCCCCeEEEEeC
Q 015463 379 AISEVEE-KDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 379 ~~s~~~~-~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+..+.. .+|+||+++...+.|.+++.
T Consensus 231 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 231 RPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CceEEEECCCCCEEEeccCCCeEEEECC
Confidence 3344443 46788888877788888764
No 13
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.78 E-value=8.6e-17 Score=159.24 Aligned_cols=241 Identities=14% Similarity=0.122 Sum_probs=167.7
Q ss_pred cccCcceEEEcCC---CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 67 QIQGPESMAFDPL---GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 67 ~~~gpe~i~~d~~---g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
++..|++|++|++ |+ ||+....++|++++.. .++.+.. ...+|.+|++++
T Consensus 137 ~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~~-----------------------~~~~P~giavd~- 191 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKTT-----------------------NIGQCADVNFTL- 191 (433)
T ss_dssp CCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEECC-----------------------CCSCEEEEEECT-
T ss_pred ccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEeec-----------------------CCCCccEEEECC-
Confidence 6789999999984 66 7766554899999985 4443321 135699999999
Q ss_pred CCcEEEEeCC-----CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADAY-----FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~~-----~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+|+|||++.. .+++.++..++.... ... ..+..|+++++|+ +|+||+++..
T Consensus 192 dG~lyVad~~~~~~~~gv~~~~~~~~~~~~--~~~--~~~~~P~giavd~~~G~lyv~d~~------------------- 248 (433)
T 4hw6_A 192 NGDMVVVDDQSSDTNTGIYLFTRASGFTER--LSL--CNARGAKTCAVHPQNGKIYYTRYH------------------- 248 (433)
T ss_dssp TCCEEEEECCSCTTSEEEEEECGGGTTCCE--EEE--EECSSBCCCEECTTTCCEEECBTT-------------------
T ss_pred CCCEEEEcCCCCcccceEEEEECCCCeecc--ccc--cccCCCCEEEEeCCCCeEEEEECC-------------------
Confidence 7889999973 367778765443210 000 1356899999999 8999999854
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeE-EEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCC--CCcceeee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQT-TVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE--KAGNLEAF 290 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~--~~~~~~~~ 290 (406)
.++|+++|++++.. +.+. .....+.++++++|++.+|++++..++|++++.++. .......+
T Consensus 249 -------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ 315 (433)
T 4hw6_A 249 -------------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIV 315 (433)
T ss_dssp -------------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEE
T ss_pred -------------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEE
Confidence 37899999987776 3332 222345689999999999999999999999987632 11112222
Q ss_pred ec---CCC------------CCCceEE---------CCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeE
Q 015463 291 AI---LPG------------YPDNVRT---------NEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLI 346 (406)
Q Consensus 291 ~~---l~g------------~pd~i~~---------d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 346 (406)
.. ..| .|.++++ |.+|+|||+....+
T Consensus 316 ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~------------------------------ 365 (433)
T 4hw6_A 316 CGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH------------------------------ 365 (433)
T ss_dssp EECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT------------------------------
T ss_pred EecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC------------------------------
Confidence 21 112 3777999 99999999986542
Q ss_pred eecCcceEEEEEECCCCCEEEEEECC--------CC-----CeeeceeEEEE--eCCEEEEecCCCCeEEEEeCC
Q 015463 347 HVGGRLHAMAVKYSPEGKILQVLEDS--------KG-----KVVKAISEVEE--KDGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 347 ~~~~~~~~~v~~~d~~g~~~~~~~~~--------~g-----~~~~~~s~~~~--~~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
.|.+++++|.+....... +| ..+.....+.. .+|+||+....++.|.+++++
T Consensus 366 --------~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 366 --------TVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp --------EEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred --------EEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 367788888665554321 11 01233455554 489999999999999998864
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=8e-16 Score=142.76 Aligned_cols=234 Identities=12% Similarity=0.210 Sum_probs=159.3
Q ss_pred CcccCcceEEEcCCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
.....|.+|++|++|+ +|+++. +++|.+++.+ .+..+... .....|.+|++++ +|
T Consensus 12 ~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~~~~~~~~~---------------------~~~~~~~~i~~~~-~g 68 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK-VWITQHKANMISCINLDGKITEYPLP---------------------TPDAKVMCLTISS-DG 68 (299)
T ss_dssp SSSCCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEEEEECS---------------------STTCCEEEEEECT-TS
T ss_pred CcCCCccceEECCCCC-EEEEecCCCcEEEEcCCCCeEEecCC---------------------cccCceeeEEECC-CC
Confidence 3456899999999999 787776 6899999876 43333211 0135689999998 89
Q ss_pred cEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 144 DLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 144 ~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
++|+++.. ++|++++++ ++++.+... .....+.+++++++|++|+++..
T Consensus 69 ~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-------------------------- 118 (299)
T 2z2n_A 69 EVWFTENAANKIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN-------------------------- 118 (299)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT--------------------------
T ss_pred CEEEeCCCCCeEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC--------------------------
Confidence 99999874 579999987 445443311 12346889999999999999753
Q ss_pred CcccCCCCeEEEEeCCCCeEEEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee--cCCCCCC
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPGYPD 298 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~--~l~g~pd 298 (406)
.++|+++|+ +++...+. .....+++++++++++ +|+++...++|++++.. +....+. .....|.
T Consensus 119 ------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~ 186 (299)
T 2z2n_A 119 ------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITES----GDITEFKIPTPASGPV 186 (299)
T ss_dssp ------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT----CCEEEEECSSTTCCEE
T ss_pred ------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcCC----CcEEEeeCCCCCCcce
Confidence 367999999 56665442 2345688999999884 78888777899999863 2222221 1123477
Q ss_pred ceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeee
Q 015463 299 NVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVK 378 (406)
Q Consensus 299 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~ 378 (406)
++++|++|++|++..... .+.+++++|+... +..+... .
T Consensus 187 ~i~~~~~g~l~v~~~~~~--------------------------------------~i~~~~~~g~~~~-~~~~~~~--~ 225 (299)
T 2z2n_A 187 GITKGNDDALWFVEIIGN--------------------------------------KIGRITTSGEITE-FKIPTPN--A 225 (299)
T ss_dssp EEEECTTSSEEEEETTTT--------------------------------------EEEEECTTCCEEE-EECSSTT--C
T ss_pred eEEECCCCCEEEEccCCc--------------------------------------eEEEECCCCcEEE-EECCCCC--C
Confidence 899999999999985431 2566677655433 3222111 1
Q ss_pred ceeEEEE-eCCEEEEecCCCCeEEEEeC
Q 015463 379 AISEVEE-KDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 379 ~~s~~~~-~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+..+.. .+|+||+++...+.|.+++.
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CceeEEECCCCCEEEeccCCceEEEECC
Confidence 3344443 45778888766777777764
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=3.4e-16 Score=145.25 Aligned_cols=231 Identities=10% Similarity=0.144 Sum_probs=162.2
Q ss_pred ccCcceEEEcCCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 68 IQGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
...|.+++++++|+ +|++.. +++|++++.+ .++.+... .....|.+|++++ +|+|
T Consensus 56 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~---------------------~~~~~~~~i~~~~-~g~l 112 (299)
T 2z2n_A 56 DAKVMCLTISSDGE-VWFTENAANKIGRITKKGIIKEYTLP---------------------NPDSAPYGITEGP-NGDI 112 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECS---------------------STTCCEEEEEECT-TSCE
T ss_pred cCceeeEEECCCCC-EEEeCCCCCeEEEECCCCcEEEEeCC---------------------CcCCCceeeEECC-CCCE
Confidence 46799999999999 677655 7889999976 44443211 0134689999998 8999
Q ss_pred EEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
|+++.. .+|+++|+ +++...+... .....+++++++++|++|+++..
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~---------------------------- 160 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELP---NKGSYPSFITLGSDNALWFTENQ---------------------------- 160 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECS---STTCCEEEEEECTTSCEEEEETT----------------------------
T ss_pred EEEecCCceEEEECC-CCCEEEecCC---CCCCCCceEEEcCCCCEEEEeCC----------------------------
Confidence 999865 67999999 5555443221 12346889999999999999753
Q ss_pred ccCCCCeEEEEeCCCCeEEEe--cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-c-CCCCCCce
Q 015463 225 ITKDTGRVLKYDPTTKQTTVL--LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-I-LPGYPDNV 300 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~--~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~-l~g~pd~i 300 (406)
.++|+++|+ +++...+ ......+.+++++++++ +|+++...++|.+++..+ ....+. . ....|.++
T Consensus 161 ----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 161 ----NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTSG----EITEFKIPTPNARPHAI 230 (299)
T ss_dssp ----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEE
T ss_pred ----CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCCC----cEEEEECCCCCCCceeE
Confidence 367999999 6776654 23456688999999886 888887778999998632 222221 1 12457889
Q ss_pred EECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeece
Q 015463 301 RTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAI 380 (406)
Q Consensus 301 ~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~~ 380 (406)
++|++|++|++.... ..+.+++++|+. ..+..+.+. ..+
T Consensus 231 ~~~~~g~l~v~~~~~--------------------------------------~~i~~~d~~g~~-~~~~~~~~~--~~~ 269 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGA--------------------------------------NKIGRLTSNNII-EEYPIQIKS--AEP 269 (299)
T ss_dssp EECSTTCEEEEETTT--------------------------------------TEEEEEETTTEE-EEEECSSSS--CCE
T ss_pred EECCCCCEEEeccCC--------------------------------------ceEEEECCCCce-EEEeCCCCC--Ccc
Confidence 999999999998442 126778887653 444333221 123
Q ss_pred eEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 381 SEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 381 s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
..+...+|+||+++. .+++.+++.
T Consensus 270 ~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 270 HGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp EEEEECSSCEEEEET-TTEEEEEEE
T ss_pred ceEEecCCCEEEEec-CCcEEEEEc
Confidence 444347899999976 689999875
No 16
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=8.8e-17 Score=154.16 Aligned_cols=200 Identities=15% Similarity=0.167 Sum_probs=133.9
Q ss_pred cCcceEEEcCCCCeeEEEec---CC--EEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 69 QGPESMAFDPLGRGPYTGVA---DG--RILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~---~g--~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
..|++++++++|+ +|++.. ++ +|++++......|.... ...| .....|++|++|+ +|
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~---~~~~-------------~~~~~p~gv~~d~-~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDGLIPFPPQS---GNAI-------------ITFDTVLGIKSDG-NG 78 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTEEEESCCCC---SSCC-------------CCCSCEEEEEECS-SS
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCCeecCCCcc---cCcc-------------cceeEeeEEEEcC-CC
Confidence 5899999999999 676632 34 78888722433332100 0001 1246799999999 79
Q ss_pred cEEEEeCC------CcEEEEeCCCCeE-EEcccc-cCCcccccccceEEcC-CCCEEEEeCCCchhhhcccccccccccc
Q 015463 144 DLYIADAY------FGLMKVGPEGGLA-TSLATE-AEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 144 ~L~Vad~~------~gl~~~d~~~~~~-~~l~~~-~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
+|||+|.. ..|+++|++++++ +.+... ....+..+++++++|+ +|.+|+++++.
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~----------------- 141 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP----------------- 141 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS-----------------
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc-----------------
Confidence 99999975 5899999998874 333211 1123345789999996 57999998641
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEeccc------------------------------CCCcceEEEecCCCEE
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRN------------------------------LQFPNGLSLSKDKSFF 264 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~------------------------------~~~~ngi~l~~d~~~l 264 (406)
...++|++||+++++...+..+ ...++||++++|++.+
T Consensus 142 ------------~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 142 ------------DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWL 209 (343)
T ss_dssp ------------GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEE
T ss_pred ------------CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEE
Confidence 0125677777776665443321 0246899999999999
Q ss_pred EEEeCCCCeEEEEEeeC---CCCcceeee---e--cCCCCCCceEECCCCCEEEEEccC
Q 015463 265 VFCEGSVGRLHKYWLIG---EKAGNLEAF---A--ILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 265 ~v~~t~~~~i~~~~~~g---~~~~~~~~~---~--~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
|++++...++++++... ......+++ . ...+.|+++++|++|++|++....
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCC
Confidence 99999888999998541 111111111 1 123579999999999999998654
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=3.5e-16 Score=145.23 Aligned_cols=231 Identities=13% Similarity=0.207 Sum_probs=163.0
Q ss_pred cccCcceEEEcCCCCeeEEEec-CCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 67 QIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
....|.+|+++++|+ +|++.. +++|++++.+ .+..+... .....|.+|++++ +|+
T Consensus 60 ~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~g~~~~~~~~---------------------~~~~~~~~i~~~~-~g~ 116 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGD-IWFTENGANKIGKLSKKGGFTEYPLP---------------------QPDSGPYGITEGL-NGD 116 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECS---------------------STTCCEEEEEECS-TTC
T ss_pred CCCcceeEEECCCCC-EEEEecCCCeEEEECCCCCeEEecCC---------------------CCCCCCccceECC-CCC
Confidence 346899999999999 676655 6889999877 44333211 0125689999998 899
Q ss_pred EEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
||+++.. ++|++++++ +++..+... .....+++++++++|++|+++..
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~d~~g~l~v~~~~--------------------------- 165 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLP---NKGSYPAFITLGSDNALWFTENQ--------------------------- 165 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSSEEEEETT---------------------------
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCC---CCCCCceeEEECCCCCEEEEecC---------------------------
Confidence 9999974 689999998 555543211 12457889999999999999853
Q ss_pred cccCCCCeEEEEeCCCCeEEEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee--cCCCCCCc
Q 015463 224 KITKDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPGYPDN 299 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~--~l~g~pd~ 299 (406)
.++|+++|+ +++...+. .....+.+++++++++ +|+++...++|.+++..+ ....+. .....|.+
T Consensus 166 -----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 166 -----NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHA 234 (300)
T ss_dssp -----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEE
T ss_pred -----CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceE
Confidence 267999999 56665543 3456788999999884 889888778999998632 222221 11235788
Q ss_pred eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeec
Q 015463 300 VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKA 379 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~ 379 (406)
+++|++|++|++.... ..+.+++++|+.. .+.-+.+. ..
T Consensus 235 i~~d~~g~l~v~~~~~--------------------------------------~~i~~~~~~g~~~-~~~~~~~~--~~ 273 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGA--------------------------------------NQIGRITNDNTIQ-EYQLQTEN--AE 273 (300)
T ss_dssp EEECSTTCEEEEETTT--------------------------------------TEEEEECTTSCEE-EEECCSTT--CC
T ss_pred EEECCCCCEEEeccCC--------------------------------------CeEEEECCCCcEE-EEECCccC--Cc
Confidence 9999999999998542 1277888887665 34333222 13
Q ss_pred eeEEEE-eCCEEEEecCCCCeEEEEeC
Q 015463 380 ISEVEE-KDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 380 ~s~~~~-~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.++.. .+|+||+++. + .|.+++.
T Consensus 274 ~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 274 PHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp CCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred cceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 444544 4789999998 6 9999875
No 18
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.76 E-value=4.3e-16 Score=153.17 Aligned_cols=242 Identities=16% Similarity=0.100 Sum_probs=165.5
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
.++..|.+|++|++|+++++...+++|.+++.+ .+..+... ...|. ++++++++
T Consensus 128 a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-----------------------~~~~~-ia~~~~g~ 183 (409)
T 3hrp_A 128 AKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-----------------------FKGGK-PAVTKDKQ 183 (409)
T ss_dssp CCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-----------------------CCBCB-CEECTTSS
T ss_pred cccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-----------------------CCCCc-eeEecCCC
Confidence 357899999999999955566677999999987 33333221 13355 88998545
Q ss_pred cEEEEeCCC--cEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 144 DLYIADAYF--GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 144 ~L~Vad~~~--gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
.||+++... .|+++++.++................|+++++++ +|.||+++.
T Consensus 184 ~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------------------------- 238 (409)
T 3hrp_A 184 RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------------------------- 238 (409)
T ss_dssp EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-------------------------
T ss_pred cEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-------------------------
Confidence 689988754 7999998866432111111111346789999999 799999763
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEe----cccCCC--cc-eEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVL----LRNLQF--PN-GLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL 293 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~----~~~~~~--~n-gi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l 293 (406)
.++|+++|++++....+ ..+... |. ++++++++..+|+++...++|++++.++. ...+...
T Consensus 239 --------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~ 306 (409)
T 3hrp_A 239 --------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGS 306 (409)
T ss_dssp --------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEEC
T ss_pred --------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeC
Confidence 26899999998876655 222222 33 99999987899999999999999987653 2222211
Q ss_pred ---------------CCCCCceEECCCCCEEEEEc-cCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEE
Q 015463 294 ---------------PGYPDNVRTNEKGEFWVAIH-CRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAV 357 (406)
Q Consensus 294 ---------------~g~pd~i~~d~~G~lwv~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~ 357 (406)
-..|.++++|++|++|++.. ..+ .|.
T Consensus 307 ~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~--------------------------------------~I~ 348 (409)
T 3hrp_A 307 ATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY--------------------------------------CLR 348 (409)
T ss_dssp TTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC--------------------------------------EEE
T ss_pred CCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC--------------------------------------EEE
Confidence 13488999999999999986 442 266
Q ss_pred EEC-CCCCEEEEEECC------CC----CeeeceeEEEE-eCCEEEEecCCCCeEEEEeCC
Q 015463 358 KYS-PEGKILQVLEDS------KG----KVVKAISEVEE-KDGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 358 ~~d-~~g~~~~~~~~~------~g----~~~~~~s~~~~-~~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
+++ ++|++....... +| ..+.....+.. .+|+||+....++.|.++.++
T Consensus 349 ~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 349 KLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 677 666554443221 11 11234455554 469999999999999998864
No 19
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.75 E-value=3.6e-16 Score=166.39 Aligned_cols=236 Identities=13% Similarity=0.224 Sum_probs=166.4
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
..+|+.|++|+ +|+|+.+++|.+++.. .++.+....... ..........+|+.|. +|+ |||
T Consensus 359 V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~~v~~i~~d~-~g~~lWi 422 (795)
T 4a2l_A 359 VSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDES--------------ARGIGSNNIKAVYVDE-KKSLVYI 422 (795)
T ss_dssp EEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC--------------------CCSCSCEEEEEEET-TTTEEEE
T ss_pred eEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCc--------------ccCCCCccEEEEEEcC-CCCEEEE
Confidence 46788999999 9999999899999976 455553211000 0000124467889998 899 999
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
++...||+++|+++++++.+.......+...+.+++.|++|+||+++.
T Consensus 423 gt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------------------- 470 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------------------- 470 (795)
T ss_dssp EETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------------------------------
T ss_pred EeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------------------------------
Confidence 998889999999998887765322222334678899999999999984
Q ss_pred CCCeEEEEeCCCCeEEEeccc-----C--CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee---cCCCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRN-----L--QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA---ILPGYP 297 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~-----~--~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~---~l~g~p 297 (406)
++|++||+++++++.+... + .....+..++++. +|++.. ++|++++.++.+. .+. ...+++
T Consensus 471 --~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~----~~~~~~~~~~l~ 541 (795)
T 4a2l_A 471 --SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI----QKASILPVSNVT 541 (795)
T ss_dssp --SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE----EECCCSCSCGGG
T ss_pred --CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE----EEecCCCCCCCC
Confidence 3599999999888776432 2 1234566666664 666653 6899998764322 221 122333
Q ss_pred C----ceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCC
Q 015463 298 D----NVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSK 373 (406)
Q Consensus 298 d----~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~ 373 (406)
. .+..|++|++|+++..+ +.++|++.+.+..+...+
T Consensus 542 ~~~i~~i~~d~~g~lWigT~~G----------------------------------------l~~~d~~~~~~~~~~~~~ 581 (795)
T 4a2l_A 542 KLFTNCIYEASNGIIWVGTREG----------------------------------------FYCFNEKDKQIKRYNTTN 581 (795)
T ss_dssp GSCEEEEEECTTSCEEEEESSC----------------------------------------EEEEETTTTEEEEECGGG
T ss_pred CCeeEEEEECCCCCEEEEeCCC----------------------------------------ceeECCCCCcEEEeCCCC
Confidence 3 46789999999999755 788998888888887667
Q ss_pred CCeeeceeEEEEe-CCEEEEecCCCCeEEEEeC
Q 015463 374 GKVVKAISEVEEK-DGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 374 g~~~~~~s~~~~~-~g~Ly~Gs~~~~~i~~~~~ 405 (406)
|.....+.++.++ +|+||+|+ .++|.+++.
T Consensus 582 gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~ 612 (795)
T 4a2l_A 582 GLPNNVVYGILEDSFGRLWLST--NRGISCFNP 612 (795)
T ss_dssp TCSCSCEEEEEECTTSCEEEEE--TTEEEEEET
T ss_pred CCchhheEEEEECCCCCEEEEc--CCceEEEcC
Confidence 7655567777665 78999999 588998874
No 20
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=8.4e-16 Score=152.06 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=168.0
Q ss_pred CcccCcceEEEcC--CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 66 NQIQGPESMAFDP--LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 66 ~~~~gpe~i~~d~--~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
.++..|+.+++|+ +|+ ||+....++|.+++.+ .++.+.. ...+|.+|++++
T Consensus 134 ~~~~~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~~-----------------------~~~~P~~ia~d~- 188 (430)
T 3tc9_A 134 GGFGGAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVYS-----------------------GLSKVRTICWTH- 188 (430)
T ss_dssp BCCSCCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEEC-----------------------CCSCEEEEEECT-
T ss_pred cCCCCCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEec-----------------------CCCCcceEEEeC-
Confidence 4578999999996 466 7776655899999987 3333321 145699999999
Q ss_pred CCc-EEEEeCCC-----cEEEEeCCCCeE--EEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhcccccccccc
Q 015463 142 TGD-LYIADAYF-----GLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQ 212 (406)
Q Consensus 142 ~g~-L~Vad~~~-----gl~~~d~~~~~~--~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~ 212 (406)
+|+ |||++... .++.++++++.. ..+. .+..|+++++++ +|+||+++..
T Consensus 189 ~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~---------------- 246 (430)
T 3tc9_A 189 EADSMIITNDQNNNDRPNNYILTRESGFKVITELT------KGQNCNGAETHPINGELYFNSWN---------------- 246 (430)
T ss_dssp TSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT----------------
T ss_pred CCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec------cCCCceEEEEeCCCCEEEEEECC----------------
Confidence 666 99999742 467777765432 1211 356799999999 8999999864
Q ss_pred ccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCC--Cccee
Q 015463 213 LCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK--AGNLE 288 (406)
Q Consensus 213 ~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~--~~~~~ 288 (406)
.++|++|+++++....+. .....|++++++++++.+|+++...++|++++.++.. .....
T Consensus 247 ----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 247 ----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp ----------------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred ----------------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 378999999987763332 2345799999999999999999999999999987531 11112
Q ss_pred eeecC---C------------CCCC-ceEE--------CCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeee
Q 015463 289 AFAIL---P------------GYPD-NVRT--------NEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHY 344 (406)
Q Consensus 289 ~~~~l---~------------g~pd-~i~~--------d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 344 (406)
.+... . ..|. ++++ |++|+|||+....+
T Consensus 311 ~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~---------------------------- 362 (430)
T 3tc9_A 311 IVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH---------------------------- 362 (430)
T ss_dssp EEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT----------------------------
T ss_pred EEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc----------------------------
Confidence 22211 1 1366 6776 56799999986431
Q ss_pred eEeecCcceEEEEEECCCCCEEEEEECC--------CC-----CeeeceeEEEEe--CCEEEEecCCCCeEEEEeCC
Q 015463 345 LIHVGGRLHAMAVKYSPEGKILQVLEDS--------KG-----KVVKAISEVEEK--DGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 345 ~~~~~~~~~~~v~~~d~~g~~~~~~~~~--------~g-----~~~~~~s~~~~~--~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
.|.+++++|++....... +| ..+.....+... +|.||+....++.|.+++++
T Consensus 363 ----------~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 363 ----------CIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp ----------EEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ----------EEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 377788888766665431 22 012345556544 68999999999999998864
No 21
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=3.7e-16 Score=148.79 Aligned_cols=248 Identities=15% Similarity=0.229 Sum_probs=157.3
Q ss_pred cccCcceEEEcCCCCeeEEEecCC-------------------------EEEEEeCC--ceeEEEeecCCCccccCCCCC
Q 015463 67 QIQGPESMAFDPLGRGPYTGVADG-------------------------RILFWDGL--KWTDFAFTSNNRSELCNPKPI 119 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~g-------------------------~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 119 (406)
++..|.+++++++|+ +|++...+ .|++++.+ .+... ..
T Consensus 22 ~l~~v~~va~d~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--~~------------ 86 (329)
T 3fvz_A 22 LPGQVSGVALDSKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS--SG------------ 86 (329)
T ss_dssp CCSCEEEEEECTTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE--EC------------
T ss_pred ecCCceEEEECCCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec--cC------------
Confidence 567899999999999 66654433 58888875 22211 11
Q ss_pred cccccccCCcCCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCC--eEEEcccc-cC---CcccccccceEEcC-CCCEE
Q 015463 120 ATSYLKNEHICGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGG--LATSLATE-AE---GVPLRFTNDLDIDD-EGNVY 191 (406)
Q Consensus 120 ~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~--~~~~l~~~-~~---~~~~~~~~~l~~d~-dG~ly 191 (406)
......|.+|++++ +|+|||++.. +.|.++++++. .+..+... .. ...+..|++|++++ +|++|
T Consensus 87 -------~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 87 -------KNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp -------TTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred -------CCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 01135699999998 8999999986 57999999876 33333221 01 23466899999999 89999
Q ss_pred EEeC-CCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec----------ccCCCcceEEEecC
Q 015463 192 FTDS-STNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL----------RNLQFPNGLSLSKD 260 (406)
Q Consensus 192 ~t~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~----------~~~~~~ngi~l~~d 260 (406)
++++ . .++|.+||++......+. ..+..|++|+++++
T Consensus 159 v~d~~~--------------------------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 159 VSDGYC--------------------------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp EEECSS--------------------------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred EEeCCC--------------------------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 9985 2 368999997654444442 13456899999999
Q ss_pred CCEEEEEeCCCCeEEEEEee-CCCCcceeeee-c-CCCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccC
Q 015463 261 KSFFVFCEGSVGRLHKYWLI-GEKAGNLEAFA-I-LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLP 337 (406)
Q Consensus 261 ~~~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~-~-l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (406)
+..+|+++...++|.+|+.+ |.. ...+. . ....|..+++.+ |.+++..... .
T Consensus 207 ~g~l~v~d~~~~~I~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~--~------------------- 261 (329)
T 3fvz_A 207 LDQLCVADRENGRIQCFKTDTKEF---VREIKHASFGRNVFAISYIP-GFLFAVNGKP--Y------------------- 261 (329)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCE---EEEECCTTTTTCEEEEEEET-TEEEEEECCC--C-------------------
T ss_pred CCEEEEEECCCCEEEEEECCCCcE---EEEEeccccCCCcceeeecC-CEEEEeCCCE--E-------------------
Confidence 77899999999999999976 321 11111 0 111233444444 4333332110 0
Q ss_pred ccceeeeeEeecCcceEEEEEEC-CCCCEEEEEECCCCCeeeceeEEE-EeCCEEEEecCCCCeEEEEeC
Q 015463 338 ISAKTHYLIHVGGRLHAMAVKYS-PEGKILQVLEDSKGKVVKAISEVE-EKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~v~~~d-~~g~~~~~~~~~~g~~~~~~s~~~-~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.......+..++ .+|+.+..+....+. ......+. ..+|+||+....++.|.++++
T Consensus 262 ----------v~~~~~~~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 262 ----------FGDQEPVQGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp ----------TTCSCCCCEEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred ----------eccCCCcEEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 0001111244555 568888777432222 23445554 457899999999999998875
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.72 E-value=1.2e-15 Score=146.91 Aligned_cols=190 Identities=17% Similarity=0.172 Sum_probs=142.6
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
..+..|+++++|+ ++.++|+...+++|++++.+ ..+.+.. .....|.||++|..+
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~----------------------~~~~~p~glavd~~~ 127 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS----------------------TGLESPGGLAVDWVH 127 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------SSCSCCCEEEEETTT
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe----------------------CCCCCccEEEEecCC
Confidence 4567899999995 56667788889999999977 2223211 113568999999767
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++||+++.. +.|.++++++...+.+.. ..+..|+++++|+ +|.||+++..
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~------------------------ 179 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG------------------------ 179 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECS------------------------
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccC------------------------
Confidence 899999986 579999998765544432 1256799999997 7899999864
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPD 298 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd 298 (406)
..++|+++++++...+.+. .++..|+||+++++++.|||+++..++|++++++|. ..+.+. ...+.|+
T Consensus 180 -------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~ 249 (349)
T 3v64_C 180 -------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPF 249 (349)
T ss_dssp -------SSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEE
T ss_pred -------CCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCCCCce
Confidence 1268999999866555554 567889999999999999999999999999998863 223333 2345799
Q ss_pred ceEECCCCCEEEEEccCC
Q 015463 299 NVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 299 ~i~~d~~G~lwv~~~~~~ 316 (406)
+++++ +|++|++.....
T Consensus 250 giav~-~~~ly~td~~~~ 266 (349)
T 3v64_C 250 AITVF-EDSLYWTDWHTK 266 (349)
T ss_dssp EEEEE-TTEEEEEETTTT
T ss_pred EEEEE-CCEEEEecCCCC
Confidence 99995 678999886543
No 23
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.72 E-value=1e-15 Score=162.82 Aligned_cols=232 Identities=13% Similarity=0.221 Sum_probs=163.2
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..+++.|++|+.||+|+.+++|++++.+ .++.+..... . .....+..|+.|+ +|+|||+
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~----------------~--l~~~~v~~i~~d~-~g~lwig 468 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS----------------Q--LVNENVYAILPDG-EGNLWLG 468 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS----------------C--CSCSCEEEEEECS-SSCEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC----------------C--cCCCeeEEEEECC-CCCEEEE
Confidence 3578888888768999998999999976 4554421100 0 1124567889998 8999999
Q ss_pred eCCCcEEEEeCCCCeEEEccccc--CCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 149 DAYFGLMKVGPEGGLATSLATEA--EGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~--~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
+. .||+++++++++++.+.... .+.....+.++++|++|+||+++.
T Consensus 469 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~------------------------------- 516 (795)
T 4a2l_A 469 TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE------------------------------- 516 (795)
T ss_dssp ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------------------------------
T ss_pred ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------------------------------
Confidence 97 79999999998887664321 112234678899999999999984
Q ss_pred CCCCeEEEEeCCCCeEEEecc-----cCC--CcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 227 KDTGRVLKYDPTTKQTTVLLR-----NLQ--FPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~~~-----~~~--~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
++|++||++++++ .+.. ++. ..+.++.++++. +|++.. ++|.+|+.+ .+..+.+....|+|++
T Consensus 517 ---~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~--~Gl~~~d~~---~~~~~~~~~~~gl~~~ 586 (795)
T 4a2l_A 517 ---EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGI-IWVGTR--EGFYCFNEK---DKQIKRYNTTNGLPNN 586 (795)
T ss_dssp ---SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSC-EEEEES--SCEEEEETT---TTEEEEECGGGTCSCS
T ss_pred ---CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeC--CCceeECCC---CCcEEEeCCCCCCchh
Confidence 3599999988877 4321 121 223555556664 666643 389999854 3344555545677776
Q ss_pred ----eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCC
Q 015463 300 ----VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGK 375 (406)
Q Consensus 300 ----i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~ 375 (406)
+..|++|++|+++..+ +.+++++.+.+..|...+|.
T Consensus 587 ~i~~i~~d~~g~lWi~t~~G----------------------------------------l~~~~~~~~~~~~~~~~dGl 626 (795)
T 4a2l_A 587 VVYGILEDSFGRLWLSTNRG----------------------------------------ISCFNPETEKFRNFTESDGL 626 (795)
T ss_dssp CEEEEEECTTSCEEEEETTE----------------------------------------EEEEETTTTEEEEECGGGTC
T ss_pred heEEEEECCCCCEEEEcCCc----------------------------------------eEEEcCCCCcEEEcCCcCCC
Confidence 6689999999999654 78899998888888877775
Q ss_pred eeece--eE-EEEeCCEEEEecCCCCeEEEEeC
Q 015463 376 VVKAI--SE-VEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 376 ~~~~~--s~-~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
....+ .+ +...+|+||+|+. +++.+++.
T Consensus 627 ~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~~~p 657 (795)
T 4a2l_A 627 QSNQFNTASYCRTSVGQMYFGGI--NGITTFRP 657 (795)
T ss_dssp SCSCEEEEEEEECTTSCEEEEET--TEEEEECG
T ss_pred ccccCccCceeECCCCeEEEecC--CceEEEcH
Confidence 54333 23 3346899999995 78888763
No 24
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=7.5e-16 Score=163.62 Aligned_cols=231 Identities=14% Similarity=0.199 Sum_probs=162.7
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..+|+.|++|+ ||+|+.+++|++++.. .++.+... ......+..|+.|+ +|+|||+
T Consensus 409 v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~--------------------~~~~~~v~~i~~d~-~g~lwig 466 (781)
T 3v9f_A 409 VLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELE--------------------KNELLDVRVFYEDK-NKKIWIG 466 (781)
T ss_dssp EEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCST--------------------TTCCCCEEEEEECT-TSEEEEE
T ss_pred eEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccC--------------------CCCCCeEEEEEECC-CCCEEEE
Confidence 35788888898 9999998899999875 34433210 00124467888998 8999999
Q ss_pred eCCCcEEEEeCCCCeEEEccccc-CCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEA-EGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~-~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+. .||+++++++++++.+.... .......+.++++|++|+||+++..
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------------------- 514 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG------------------------------- 514 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-------------------------------
T ss_pred EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-------------------------------
Confidence 97 79999999987765543221 1122356788999999999999853
Q ss_pred CCCeEEEEeCCCCeEEEecc--cCCC--cceEEEecCCCEEEEEeCCCCeE-EEEEeeCCCCcceeeeecCCCCCC----
Q 015463 228 DTGRVLKYDPTTKQTTVLLR--NLQF--PNGLSLSKDKSFFVFCEGSVGRL-HKYWLIGEKAGNLEAFAILPGYPD---- 298 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~--~~~~--~ngi~l~~d~~~l~v~~t~~~~i-~~~~~~g~~~~~~~~~~~l~g~pd---- 298 (406)
++|++||+++++++.+.. ++.. ...++.++++. +|++.. .++ .+|+.+ .+..+.+....|+|+
T Consensus 515 --~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~--~Glv~~~d~~---~~~~~~~~~~~gl~~~~i~ 586 (781)
T 3v9f_A 515 --GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MWLATG--EGLVCFPSAR---NFDYQVFQRKEGLPNTHIR 586 (781)
T ss_dssp --SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EEEEET--TEEEEESCTT---TCCCEEECGGGTCSCCCCC
T ss_pred --CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EEEEEC--CCceEEECCC---CCcEEEccccCCCCCceEE
Confidence 459999999888877643 2322 23555555664 666643 567 888754 334455544456665
Q ss_pred ceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeee
Q 015463 299 NVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVK 378 (406)
Q Consensus 299 ~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~ 378 (406)
++..|++|+||+++..+ +.+|+++.+.+..|...+|....
T Consensus 587 ~i~~d~~g~lW~~t~~G----------------------------------------l~~~~~~~~~~~~~~~~dGl~~~ 626 (781)
T 3v9f_A 587 AISEDKNGNIWASTNTG----------------------------------------ISCYITSKKCFYTYDHSNNIPQG 626 (781)
T ss_dssp EEEECSSSCEEEECSSC----------------------------------------EEEEETTTTEEEEECGGGTCCSS
T ss_pred EEEECCCCCEEEEcCCc----------------------------------------eEEEECCCCceEEecccCCcccc
Confidence 47789999999998765 88899999899999877775433
Q ss_pred ce---eEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 379 AI---SEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 379 ~~---s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.. +.+...+|+||+|+. +++.+++.
T Consensus 627 ~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p 654 (781)
T 3v9f_A 627 SFISGCVTKDHNGLIYFGSI--NGLCFFNP 654 (781)
T ss_dssp CEEEEEEEECTTSCEEEEET--TEEEEECS
T ss_pred ccccCceEECCCCEEEEECC--CceEEECh
Confidence 32 233345899999995 78888764
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.71 E-value=1.7e-15 Score=139.62 Aligned_cols=188 Identities=18% Similarity=0.153 Sum_probs=136.7
Q ss_pred ccCcceEEEcCC-CCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 68 IQGPESMAFDPL-GRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 68 ~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
...|+++++|++ +.++|+...+++|.+++.+ . ...+.. .....|.+|++++++++
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----------------------~~~~~p~~ia~d~~~~~ 92 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----------------------QDLGSPEGIALDHLGRT 92 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----------------------TTCCCEEEEEEETTTTE
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----------------------CCCCCccEEEEEecCCe
Confidence 467999999985 4555566778899999876 2 222210 01256999999985689
Q ss_pred EEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 145 L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
||+++.. +.|.+++.++...+.+... .+..|+++++|+ +|+||+++..
T Consensus 93 lyv~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~-------------------------- 142 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGTQRRVLFDT----GLVNPRGIVTDPVRGNLYWTDWN-------------------------- 142 (267)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECS----SCSSEEEEEEETTTTEEEEEECC--------------------------
T ss_pred EEEEECCCCEEEEEEcCCCCEEEEEEC----CCCCccEEEEeeCCCEEEEEECC--------------------------
Confidence 9999986 5799999887654443221 245789999998 5899999853
Q ss_pred CcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceE
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVR 301 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~ 301 (406)
...++|+++++++...+.+. ..+..|+|++++++++.+||++...++|+++++++. ....+......|++++
T Consensus 143 ----~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~P~gi~ 215 (267)
T 1npe_A 143 ----RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLEGLQYPFAVT 215 (267)
T ss_dssp ----SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE---EEEEEEECCCSEEEEE
T ss_pred ----CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC---ceEEEecCCCCceEEE
Confidence 12367999988755444443 567789999999999999999999999999998652 2223333345699999
Q ss_pred ECCCCCEEEEEccC
Q 015463 302 TNEKGEFWVAIHCR 315 (406)
Q Consensus 302 ~d~~G~lwv~~~~~ 315 (406)
.| +|.+|++....
T Consensus 216 ~d-~~~lyva~~~~ 228 (267)
T 1npe_A 216 SY-GKNLYYTDWKT 228 (267)
T ss_dssp EE-TTEEEEEETTT
T ss_pred Ee-CCEEEEEECCC
Confidence 98 68899988654
No 26
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=3.4e-15 Score=158.55 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=161.6
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..+|+.|++|+ +|+|+.+++|.+++.. .++.+........ ..........+|+.|+ +|+|||+
T Consensus 315 v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~~~v~~i~~d~-~g~lWig 379 (781)
T 3v9f_A 315 ARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMN-------------ESSLSNKVVSSVCDDG-QGKLWIG 379 (781)
T ss_dssp EEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCC-------------SSCCSSSCEEEEEECT-TSCEEEE
T ss_pred EEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccc-------------cCCCCCcceEEEEEcC-CCCEEEE
Confidence 35789999998 9999999999999876 4555432110000 0001124467889998 8999999
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
+..+||++++++++.++.+... .+.+...+.+++.|++|+||+++..
T Consensus 380 t~~~Gl~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~d~~g~lWigt~~-------------------------------- 426 (781)
T 3v9f_A 380 TDGGGINVFENGKRVAIYNKEN-RELLSNSVLCSLKDSEGNLWFGTYL-------------------------------- 426 (781)
T ss_dssp EBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEEEETT--------------------------------
T ss_pred eCCCcEEEEECCCCeEEEccCC-CCCCCcceEEEEECCCCCEEEEecc--------------------------------
Confidence 9888999999987766655321 1223356788999999999999853
Q ss_pred CCeEEEEeCCCCeEEEeccc-CC--CcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCC------CCCCc
Q 015463 229 TGRVLKYDPTTKQTTVLLRN-LQ--FPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP------GYPDN 299 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~-~~--~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~------g~pd~ 299 (406)
++|++||+++++++.+... +. ....++.++++ .+|+... ++|++++.++. ..+.+.... .....
T Consensus 427 -~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lwigt~--~Gl~~~~~~~~---~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 427 -GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNK-KIWIGTH--AGVFVIDLASK---KVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp -EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTS-EEEEEET--TEEEEEESSSS---SCCEEECTTTSSCSCSCEEE
T ss_pred -CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCC-CEEEEEC--CceEEEeCCCC---eEEecccCcccccccceeEE
Confidence 5799999998888776432 22 22345555444 4666643 68999986532 222332111 22345
Q ss_pred eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeec
Q 015463 300 VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKA 379 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~ 379 (406)
++.|++|++|+++... .+++++++++.+..+...++.....
T Consensus 500 i~~d~~g~lWigt~~~---------------------------------------Gl~~~~~~~~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 500 IAQDSEGRFWIGTFGG---------------------------------------GVGIYTPDMQLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEECTTCCEEEEESSS---------------------------------------CEEEECTTCCEEEEECTTTTCSCSC
T ss_pred EEEcCCCCEEEEEcCC---------------------------------------CEEEEeCCCCeEEEccCCCCCCCCe
Confidence 7789999999999632 1788999888888887666655556
Q ss_pred eeEEEE-eCCEEEEecCCCCeE-EEEeC
Q 015463 380 ISEVEE-KDGKLWMGSVLMPFV-AVYDL 405 (406)
Q Consensus 380 ~s~~~~-~~g~Ly~Gs~~~~~i-~~~~~ 405 (406)
+.++.+ .+|+||+|+. .++ .+++.
T Consensus 541 i~~i~~d~~g~lWi~T~--~Glv~~~d~ 566 (781)
T 3v9f_A 541 INQIYRSSKGQMWLATG--EGLVCFPSA 566 (781)
T ss_dssp EEEEEECTTSCEEEEET--TEEEEESCT
T ss_pred eEEEEECCCCCEEEEEC--CCceEEECC
Confidence 777776 4789999996 677 87764
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.70 E-value=1.6e-15 Score=147.91 Aligned_cols=190 Identities=17% Similarity=0.166 Sum_probs=141.5
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
..+..|+++++|+ ++.++|+...+++|++++.+ ..+.+... ....|.||++|+.+
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----------------------~~~~p~glavd~~~ 170 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----------------------GLESPGGLAVDWVH 170 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS----------------------SCSCCCCEEEETTT
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC----------------------CCCCccEEEEEeCC
Confidence 4567899999995 56677788889999999987 23333211 13468999999767
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++||+++.. +.|.++++++...+.+.. ..+..|++|++|+ +|.||+++..
T Consensus 171 g~lY~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~------------------------ 222 (386)
T 3v65_B 171 DKLYWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG------------------------ 222 (386)
T ss_dssp TEEEEEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECS------------------------
T ss_pred CeEEEEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccC------------------------
Confidence 999999986 579999998765544432 1356799999996 6789999864
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
..++|+++++++...+.+ ..++..|+||+++++++.|||+++..++|++++++|.. ...++....+.|++
T Consensus 223 -------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~--~~~~~~~~~~~P~g 293 (386)
T 3v65_B 223 -------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH--RKAVISQGLPHPFA 293 (386)
T ss_dssp -------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS--CEEEECSSCSSEEE
T ss_pred -------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe--eEEEEECCCCCceE
Confidence 126899999986555554 36678899999999999999999999999999987632 22222233457999
Q ss_pred eEECCCCCEEEEEccC
Q 015463 300 VRTNEKGEFWVAIHCR 315 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~ 315 (406)
++++ ++.+|++....
T Consensus 294 iav~-~~~ly~td~~~ 308 (386)
T 3v65_B 294 ITVF-EDSLYWTDWHT 308 (386)
T ss_dssp EEEE-TTEEEEEETTT
T ss_pred EEEE-CCEEEEeeCCC
Confidence 9995 56788887654
No 28
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.69 E-value=7.8e-15 Score=141.34 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=118.6
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC---C
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK---T 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~---~ 142 (406)
.++..|++|+++++|+ +|+....|+|++++.+..+.+.... - .....+.|+||+++++ +
T Consensus 26 ~~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~-v----------------~~~g~~g~~gia~~pdf~~~ 87 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFD-V----------------ANVGEAGLLGLALHPEFPKK 87 (354)
T ss_dssp CSCSCEEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECC-C----------------CCSTTCSEEEEEECTTTTTS
T ss_pred CCCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccc-e----------------eecCCCceeeEEeCCCCCcC
Confidence 4688999999999998 8888888999999765324443211 0 0111356999999984 5
Q ss_pred CcEEEEeCC--------CcEEEEeCCCC--e---EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 143 GDLYIADAY--------FGLMKVGPEGG--L---ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 143 g~L~Vad~~--------~gl~~~d~~~~--~---~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
+.|||++.. ..|.+++.+++ . .+.+...........+++|++++||+||+++...... ..
T Consensus 88 g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~--~~----- 160 (354)
T 3a9g_A 88 SWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADP--RL----- 160 (354)
T ss_dssp CEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCG--GG-----
T ss_pred CEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCC--cc-----
Confidence 899999864 57999998765 1 2333222222334578999999999999997432110 00
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCC--------eEEEecccCCCcceEEEecCCCEEEEEeCCCCe
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGR 273 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~ 273 (406)
.++. ....|+|+|+++++. ..+.+..++.+|+|++++++...||+++....+
T Consensus 161 -~~d~-----------~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~ 220 (354)
T 3a9g_A 161 -AQDL-----------SSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG 220 (354)
T ss_dssp -GTCT-----------TCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS
T ss_pred -ccCC-----------CCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC
Confidence 0000 233589999999854 346778889999999999965569999987665
No 29
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.68 E-value=9.6e-15 Score=138.51 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=138.9
Q ss_pred cccCcceEEEcCC-CCeeEEEecCCEEEEEeCCce---eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 67 QIQGPESMAFDPL-GRGPYTGVADGRILFWDGLKW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 67 ~~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
.+..|+++++|++ +.++|+...+++|++++.+.. ..... ........|.||++|..+
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-------------------~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE-------------------EECSSCSCCCEEEEETTT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE-------------------EEeCCCCCcCEEEEeecC
Confidence 4678999999975 566777888899999987520 00000 000113568999999657
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++||+++.. +.|.++++++...+.+... .+..|+++++|+ +|.||+++..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~------------------------ 140 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG------------------------ 140 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS------------------------
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC------------------------
Confidence 899999986 5799999987765554331 245789999996 7899999853
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec---CCCC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGY 296 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~---l~g~ 296 (406)
..++|+++++++...+.+. ..+..|+|++++++++.+||+++..++|.+++++|. ..+.+.. ..+.
T Consensus 141 -------~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~~~~~~~~ 210 (316)
T 1ijq_A 141 -------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAH 210 (316)
T ss_dssp -------SSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSS
T ss_pred -------CCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEeecCCccCC
Confidence 1268999999755555443 567889999999999999999999999999998863 2334432 2356
Q ss_pred CCceEECCCCCEEEEEccC
Q 015463 297 PDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 297 pd~i~~d~~G~lwv~~~~~ 315 (406)
|++++++ +|++|++....
T Consensus 211 P~giav~-~~~ly~~d~~~ 228 (316)
T 1ijq_A 211 PFSLAVF-EDKVFWTDIIN 228 (316)
T ss_dssp EEEEEEE-TTEEEEEETTT
T ss_pred cEEEEEE-CCEEEEEECCC
Confidence 9999997 47888887654
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=3.8e-14 Score=134.90 Aligned_cols=220 Identities=13% Similarity=0.146 Sum_probs=148.0
Q ss_pred ccCcceEEEcCCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
...|++++++++|. +|++. .++.|.++|....+........ ........|.+|+++ ++.||
T Consensus 83 ~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g---------------~~~~~~~~p~~i~~~--~~~ly 144 (328)
T 3dsm_A 83 FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECP---------------DMDMESGSTEQMVQY--GKYVY 144 (328)
T ss_dssp CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECT---------------TCCTTTCBCCCEEEE--TTEEE
T ss_pred CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcC---------------CccccCCCcceEEEE--CCEEE
Confidence 46899999988886 88887 8899999998722211111100 000001368899994 78999
Q ss_pred EEeC--CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 147 IADA--YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 147 Vad~--~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
|++. .+.|..+|++++++...... ...|++++++++|++|+++..... ...|
T Consensus 145 v~~~~~~~~v~viD~~t~~~~~~i~~-----g~~p~~i~~~~dG~l~v~~~~~~~-~~~~-------------------- 198 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDKVVDELTI-----GIQPTSLVMDKYNKMWTITDGGYE-GSPY-------------------- 198 (328)
T ss_dssp EEECTTCCEEEEEETTTTEEEEEEEC-----SSCBCCCEECTTSEEEEEBCCBCT-TCSS--------------------
T ss_pred EEcCCCCCEEEEEECCCCeEEEEEEc-----CCCccceEEcCCCCEEEEECCCcc-CCcc--------------------
Confidence 9986 46799999998875432211 135789999999999999854100 0000
Q ss_pred ccCCCCeEEEEeCCCCeEEEecc--cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC-CCCCCceE
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLR--NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL-PGYPDNVR 301 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~--~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l-~g~pd~i~ 301 (406)
....+.|+++|++++++..... ....|+++++++|++.+|+++. .|++++.++.+... ..+... ...|++++
T Consensus 199 -~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 199 -GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLEFRDTKYYGLT 273 (328)
T ss_dssp -CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBCCCSSCEEEEE
T ss_pred -ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeecCCCCceEEEE
Confidence 1124789999999888754322 1247899999999999999864 89999876433221 122221 35699999
Q ss_pred ECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEE
Q 015463 302 TNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLE 370 (406)
Q Consensus 302 ~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 370 (406)
+|+ +|++||+..... ...+.|.+||++|+.+..+.
T Consensus 274 vdp~~g~lyva~~~~y----------------------------------~~~~~V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDY----------------------------------QQQGIVYRYSPQGKLIDEFY 309 (328)
T ss_dssp ECTTTCCEEEEECTTS----------------------------------SSEEEEEEECTTCCEEEEEE
T ss_pred EcCCCCeEEEEccccc----------------------------------ccCCEEEEECCCCCEEEEEE
Confidence 997 788999983220 11235888999999888875
No 31
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.65 E-value=1.5e-14 Score=137.31 Aligned_cols=189 Identities=17% Similarity=0.177 Sum_probs=139.6
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC-ce--eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL-KW--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
.++..|.++.+|+ ++.++|+...+++|++++.+ .. +.+... ....|.||++|..
T Consensus 32 ~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----------------------~l~~p~glavd~~ 89 (318)
T 3sov_A 32 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----------------------GLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----------------------CCSCCCEEEEETT
T ss_pred cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----------------------CCCCccEEEEEcC
Confidence 3456788899986 56777888889999999876 21 111111 1356899999975
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
+++||++|.. +.|.++++++...+.+.. ..+..|+++++|+ +|.||+++..
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------------- 142 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------------- 142 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSSEEEEEEEGGGTEEEEEECS-----------------------
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEe----CCCCCccEEEEeCCCCEEEEEecC-----------------------
Confidence 8999999986 579999998765554432 2356799999997 6899999853
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CCCCC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYP 297 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~g~p 297 (406)
..++|+++++++...+.+ ..++..||||+++++++.+||+++..++|++++++|. ..+.+.. ..+.|
T Consensus 143 --------~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P 211 (318)
T 3sov_A 143 --------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHP 211 (318)
T ss_dssp --------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCE
T ss_pred --------CCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCc
Confidence 136899999986554444 4678899999999999999999999999999998863 2234443 34679
Q ss_pred CceEECCCCCEEEEEccC
Q 015463 298 DNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 298 d~i~~d~~G~lwv~~~~~ 315 (406)
++++++.+ .+|++....
T Consensus 212 ~glav~~~-~lywtd~~~ 228 (318)
T 3sov_A 212 FALTLFED-ILYWTDWST 228 (318)
T ss_dssp EEEEEETT-EEEEEETTT
T ss_pred eEEEEeCC-EEEEEecCC
Confidence 99999854 566666543
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=1.9e-14 Score=131.84 Aligned_cols=186 Identities=22% Similarity=0.311 Sum_probs=134.4
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
.....|.+|+++++|+ +|++..+++|++++.+ . ...+.. .....|.+|++++ +|
T Consensus 64 ~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~~~~----------------------~~~~~p~~i~~~~-~g 119 (270)
T 1rwi_B 64 NGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTVLPF----------------------DGLNYPEGLAVDT-QG 119 (270)
T ss_dssp CSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEECCC----------------------CSCSSEEEEEECT-TC
T ss_pred CCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEeeeec----------------------CCcCCCcceEECC-CC
Confidence 3456899999999999 7777668899999876 2 111100 1124689999998 89
Q ss_pred cEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 144 DLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 144 ~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
+|||++.. ++|++++..+....... ...+..|++++++++|++|+++..
T Consensus 120 ~l~v~~~~~~~i~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~g~l~v~~~~-------------------------- 169 (270)
T 1rwi_B 120 AVYVADRGNNRVVKLAAGSKTQTVLP----FTGLNDPDGVAVDNSGNVYVTDTD-------------------------- 169 (270)
T ss_dssp CEEEEEGGGTEEEEECTTCCSCEECC----CCSCCSCCCEEECTTCCEEEEEGG--------------------------
T ss_pred CEEEEECCCCEEEEEECCCceeEeec----cccCCCceeEEEeCCCCEEEEECC--------------------------
Confidence 99999875 57999986654333221 122457899999999999999853
Q ss_pred CcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCce
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNV 300 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i 300 (406)
.++|++||++++..... ...+..+.++++++++ .+|+++...++|.+++.++... .... .....|.++
T Consensus 170 ------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i 239 (270)
T 1rwi_B 170 ------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAV 239 (270)
T ss_dssp ------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEE
T ss_pred ------CCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeE
Confidence 26799999987765543 2345778999999998 6899998888999998764321 1111 111358899
Q ss_pred EECCCCCEEEEEccC
Q 015463 301 RTNEKGEFWVAIHCR 315 (406)
Q Consensus 301 ~~d~~G~lwv~~~~~ 315 (406)
++|++|++|++....
T Consensus 240 ~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 240 AVDSDRTVYVADRGN 254 (270)
T ss_dssp EECTTCCEEEEEGGG
T ss_pred EECCCCCEEEEECCC
Confidence 999999999998654
No 33
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.64 E-value=1.5e-13 Score=132.22 Aligned_cols=195 Identities=13% Similarity=0.168 Sum_probs=139.4
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~ 207 (406)
..+|.|+++|+.++.||++|.. +.|++++++++..+.+... .+..|.++++|. +|+||+++..
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~ly~~d~~----------- 136 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG----------- 136 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT-----------
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC----CCCCccEEEEecCCCeEEEEcCC-----------
Confidence 3569999999768999999976 5699999988765544321 245689999996 7899999964
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeCCCCc
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAG 285 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g~~~~ 285 (406)
.++|.++++++...+.+. ..+..|++++++|++..+||++... .+|++++++|..
T Consensus 137 ---------------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 193 (349)
T 3v64_C 137 ---------------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-- 193 (349)
T ss_dssp ---------------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred ---------------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC--
Confidence 367999998866555544 5678899999999888999999987 899999988632
Q ss_pred ceeeee-cCCCCCCceEECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCC
Q 015463 286 NLEAFA-ILPGYPDNVRTNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG 363 (406)
Q Consensus 286 ~~~~~~-~l~g~pd~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g 363 (406)
.+.+. ..-..|+++++|+ +|+||++....+ .|.+++.+|
T Consensus 194 -~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~--------------------------------------~I~~~~~dG 234 (349)
T 3v64_C 194 -RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH--------------------------------------VIERANLDG 234 (349)
T ss_dssp -CEESCCSSCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEEETTS
T ss_pred -cEEEEECCCCCcceEEEeCCCCEEEEEECCCC--------------------------------------EEEEEeCCC
Confidence 22232 2234699999995 677999975432 255666666
Q ss_pred CEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEe
Q 015463 364 KILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYD 404 (406)
Q Consensus 364 ~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~ 404 (406)
...+.+.... .....++...+++||+....++.|.+++
T Consensus 235 ~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 235 SHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp CSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 5433332211 1123344446788888888888888876
No 34
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.62 E-value=2.7e-13 Score=132.10 Aligned_cols=195 Identities=13% Similarity=0.178 Sum_probs=139.8
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~ 207 (406)
..+|.|+++|+.++.||++|.. +.|++++++++..+.+... .+..|+++++|. +|+||+++..
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~lY~~d~~----------- 179 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG----------- 179 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS----SCSCCCCEEEETTTTEEEEEETT-----------
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC----CCCCccEEEEEeCCCeEEEEcCC-----------
Confidence 3569999999768899999976 5699999998766554321 245689999996 6899999964
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeCCCCc
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAG 285 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g~~~~ 285 (406)
.++|.++++++...+.+ ..++..|++|+++|++..+||++... .+|++++++|..
T Consensus 180 ---------------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 236 (386)
T 3v65_B 180 ---------------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-- 236 (386)
T ss_dssp ---------------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred ---------------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--
Confidence 25789999876654444 45678899999999999999999887 899999987632
Q ss_pred ceeeee-cCCCCCCceEEC-CCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCC
Q 015463 286 NLEAFA-ILPGYPDNVRTN-EKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG 363 (406)
Q Consensus 286 ~~~~~~-~l~g~pd~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g 363 (406)
...+. .....|++|++| .+++||++....+ .|.+++.+|
T Consensus 237 -~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~--------------------------------------~I~~~d~dG 277 (386)
T 3v65_B 237 -RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH--------------------------------------VIERANLDG 277 (386)
T ss_dssp -CEEEECSSCSCEEEEEEEGGGTEEEEEETTTT--------------------------------------EEEEECTTS
T ss_pred -cEEEEECCCCCeeeEEEeCCCCEEEEEECCCC--------------------------------------EEEEEeCCC
Confidence 22232 233469999999 4677999975431 266677776
Q ss_pred CEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEe
Q 015463 364 KILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYD 404 (406)
Q Consensus 364 ~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~ 404 (406)
...+.+... + .....++...+++||+....++.|.+++
T Consensus 278 ~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 278 SHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 543333221 1 1123344446778888888888888876
No 35
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.62 E-value=6.8e-14 Score=134.68 Aligned_cols=211 Identities=17% Similarity=0.175 Sum_probs=135.8
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC---C
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK---T 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~---~ 142 (406)
.++..|++|+++++|+ +|+....|+|++++....+.+.... ......+.|+||+++++ +
T Consensus 28 ~~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~~g~~~~~~~~~-----------------v~~~g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 28 GGLEVPWALAFLPDGG-MLIAERPGRIRLFREGRLSTYAELS-----------------VYHRGESGLLGLALHPRFPQE 89 (352)
T ss_dssp CCCSCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEEEECC-----------------CCCSTTCSEEEEEECTTTTTS
T ss_pred CCCCCceEEEEcCCCe-EEEEeCCCeEEEEECCCccEeecce-----------------EeecCCCCceeEEECCCCCCC
Confidence 3578999999999999 8888888999999833433333211 00111456999999984 4
Q ss_pred CcEEEEeCC------CcEEEEeCCCCeE---EEcccccC--CcccccccceEEcCCCCEEEEeCCCchhhhccccccccc
Q 015463 143 GDLYIADAY------FGLMKVGPEGGLA---TSLATEAE--GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPL 211 (406)
Q Consensus 143 g~L~Vad~~------~gl~~~d~~~~~~---~~l~~~~~--~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 211 (406)
+.|||++.. ..|.+++.+++.+ +.+..... ......+++|++++||+||+++...... .. .
T Consensus 90 g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~--~~------~ 161 (352)
T 2ism_A 90 PYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYER--EL------A 161 (352)
T ss_dssp CEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCG--GG------G
T ss_pred CEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCC--cc------c
Confidence 899999874 5799999876532 23332222 2235678999999999999997532110 00 0
Q ss_pred cccccCCCCCCCcccCCCCeEEEEeCCC-------------CeEEEecccCCCcceEEEecCCCEEEEEeCCCCe-----
Q 015463 212 QLCSSLNDPSPIKITKDTGRVLKYDPTT-------------KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGR----- 273 (406)
Q Consensus 212 ~~~~e~~~~~~~~~~~~~g~l~~~d~~t-------------~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~----- 273 (406)
++. ....|+|+++++++ ...+.+..++.+|+|++++++...||+++...++
T Consensus 162 ~d~-----------~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~ 230 (352)
T 2ism_A 162 QDL-----------ASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYG 230 (352)
T ss_dssp GCT-----------TCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------C
T ss_pred cCC-----------CCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCC
Confidence 000 23358999999985 2445677788999999999966679999987665
Q ss_pred ---EEEEEeeCCCCcce------------eeeecC--CCCCCceEECCCCCEEEEEccC
Q 015463 274 ---LHKYWLIGEKAGNL------------EAFAIL--PGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 274 ---i~~~~~~g~~~~~~------------~~~~~l--~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
|.++. .|.+.+.. ...... ...|.++++ .+|++|++...+
T Consensus 231 ~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~ 287 (352)
T 2ism_A 231 HDEVNLIV-PGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRG 287 (352)
T ss_dssp CCEEEEEC-TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTT
T ss_pred CeEEEEec-cCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCC
Confidence 44432 23222211 111111 124678888 578899987654
No 36
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.61 E-value=5.3e-14 Score=145.34 Aligned_cols=189 Identities=17% Similarity=0.128 Sum_probs=146.3
Q ss_pred cCcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 65 LNQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 65 ~~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..++..|.+|++|+ ++.++|+...+++|++++.+ ..+.+... ....|.||++|..
T Consensus 33 ~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~----------------------g~~~P~GlAvD~~ 90 (628)
T 4a0p_A 33 LTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF----------------------GLDYPEGMAVDWL 90 (628)
T ss_dssp CCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----------------------SCSCCCEEEEETT
T ss_pred cCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC----------------------CCCCcceEEEEeC
Confidence 34677899999997 46666778889999999876 33333211 1356999999976
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
.++||++|.. +.|.+++++++..+.+.. ..+..|++|++|+ +|.||+++.+
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------------- 143 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------------- 143 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECS-----------------------
T ss_pred CCEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCC-----------------------
Confidence 7899999986 569999998776555432 2356799999997 7999999953
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
..++|+++++++...+.+...+..|+||+++++++.|||+++..++|++++++|... +++......|.+
T Consensus 144 --------~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P~g 212 (628)
T 4a0p_A 144 --------GKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHPFG 212 (628)
T ss_dssp --------SSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCEEE
T ss_pred --------CCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCceE
Confidence 136899999987777777788999999999999999999999999999999987422 455543456999
Q ss_pred eEECCCCCEEEEEcc
Q 015463 300 VRTNEKGEFWVAIHC 314 (406)
Q Consensus 300 i~~d~~G~lwv~~~~ 314 (406)
++++. +++|++...
T Consensus 213 lav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 213 LTQYQ-DYIYWTDWS 226 (628)
T ss_dssp EEEET-TEEEEEETT
T ss_pred EEEEC-CEEEEecCC
Confidence 99986 678888653
No 37
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.61 E-value=1.2e-13 Score=135.23 Aligned_cols=189 Identities=15% Similarity=0.144 Sum_probs=138.8
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCCc------eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGLK------WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
..+..|.+|++|+ ++.++|+...+++|++++.+. .+.+. ......|.||++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~----------------------~~~~~~p~glav 166 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----------------------SRDIQAPDGLAV 166 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE----------------------CSSCSCEEEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE----------------------eCCCCCcccEEE
Confidence 4567899999996 566677788889999998762 11111 112456999999
Q ss_pred eCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhcccccccccccccc
Q 015463 139 DKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 139 d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
|..+++||++|.. +.|.+++++++..+.+... .+..|++|++|+ +|.||+++..
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~-------------------- 222 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG-------------------- 222 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECS--------------------
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEeCC--------------------
Confidence 9767899999986 5799999998766655432 355799999997 6899999853
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec---
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--- 292 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~--- 292 (406)
..++|++++.++...+.+ ..++..|+||+++++++.|||+++..++|++++++|. ..+.+..
T Consensus 223 -----------~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~ 288 (400)
T 3p5b_L 223 -----------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEK 288 (400)
T ss_dssp -----------SSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEEECSS
T ss_pred -----------CCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEEeCCC
Confidence 125799999986555554 4567899999999999999999999999999998863 2233332
Q ss_pred CCCCCCceEECCCCCEEEEEccC
Q 015463 293 LPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 293 l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
..+.|.+++++. +.+|++....
T Consensus 289 ~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 289 RLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp TTSSEEEEEEET-TEEEEEESSS
T ss_pred CCCCCEEEEEeC-CEEEEecCCC
Confidence 234688999964 4566666544
No 38
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.61 E-value=4.5e-13 Score=123.29 Aligned_cols=194 Identities=16% Similarity=0.160 Sum_probs=137.7
Q ss_pred CcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCC-CCEEEEeCCCchhhhcccccc
Q 015463 131 GRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRQMQKEN 208 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d-G~ly~t~~~~~~~~~~~~~~~ 208 (406)
.+|.|+++|+++++||+++.. +.|++++++++..+.+.. ..+..|+++++|++ |+||+++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~p~~ia~d~~~~~lyv~d~~------------ 99 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----QDLGSPEGIALDHLGRTIFWTDSQ------------ 99 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----TTCCCEEEEEEETTTTEEEEEETT------------
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----CCCCCccEEEEEecCCeEEEEECC------------
Confidence 468899999867899999986 569999998775443321 12457899999985 789999864
Q ss_pred ccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCC--CCeEEEEEeeCCCCc
Q 015463 209 IPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS--VGRLHKYWLIGEKAG 285 (406)
Q Consensus 209 ~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~--~~~i~~~~~~g~~~~ 285 (406)
.++|.+++.++...+.+. .++..|+++++++++..+||++.. .++|++++++|..
T Consensus 100 --------------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-- 157 (267)
T 1npe_A 100 --------------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-- 157 (267)
T ss_dssp --------------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--
T ss_pred --------------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--
Confidence 367999998765444443 456789999999988899999976 5799999987532
Q ss_pred ceeeee-cCCCCCCceEECCC-CCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCC
Q 015463 286 NLEAFA-ILPGYPDNVRTNEK-GEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG 363 (406)
Q Consensus 286 ~~~~~~-~l~g~pd~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g 363 (406)
.+.+. .....|.++++|++ +++|++..... .|.+++.+|
T Consensus 158 -~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~--------------------------------------~I~~~~~~g 198 (267)
T 1npe_A 158 -RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH--------------------------------------RAECLNPAQ 198 (267)
T ss_dssp -CEEEECTTCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEEETTE
T ss_pred -cEEEEECCCCCCcEEEEcCCCCEEEEEECCCC--------------------------------------EEEEEecCC
Confidence 22332 22356999999986 46999986432 256667776
Q ss_pred CEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 364 KILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 364 ~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.....+...-. ....+...+++||+....++.|.+++.
T Consensus 199 ~~~~~~~~~~~----~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 199 PGRRKVLEGLQ----YPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEEEEEECCC----SEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CceEEEecCCC----CceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 54444332111 223444567899999888888988875
No 39
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=4.8e-13 Score=133.06 Aligned_cols=245 Identities=15% Similarity=0.158 Sum_probs=165.2
Q ss_pred cCcccCcceEEEcC--CCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE-
Q 015463 65 LNQIQGPESMAFDP--LGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF- 138 (406)
Q Consensus 65 ~~~~~gpe~i~~d~--~g~~ly~g~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~- 138 (406)
...+..|..|++|| +++ ||+... +++|.+++.+ .++.+..... ....+|.+|++
T Consensus 135 ~~~~~~p~~la~dp~~~~~-Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-------------------~~~~~p~~ia~~ 194 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDH-LYICYDGHKAIQLIDLKNRMLSSPLNINT-------------------IPTNRIRSIAFN 194 (496)
T ss_dssp CBCCCSEEEEEEETTEEEE-EEEEEETEEEEEEEETTTTEEEEEECCTT-------------------SSCSBEEEEEEC
T ss_pred ccccCCCCEEEEccCCCCE-EEEEECCCCeEEEEECCCCEEEEEEccCc-------------------cccCCCcEEEEe
Confidence 55677899999997 355 777655 4789999976 4544432210 11357999999
Q ss_pred ------eCCCCc-EEEEeCCC-------cEEEEeCCC-CeEE------EcccccCCcccccccceEEcC-CCCEEEEeCC
Q 015463 139 ------DKKTGD-LYIADAYF-------GLMKVGPEG-GLAT------SLATEAEGVPLRFTNDLDIDD-EGNVYFTDSS 196 (406)
Q Consensus 139 ------d~~~g~-L~Vad~~~-------gl~~~d~~~-~~~~------~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~ 196 (406)
++ +|+ |||++... .++.++++. +.+. .+. .+..|+++++++ +|.||+++..
T Consensus 195 ~~~~~~d~-~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 195 KKIEGYAD-EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE 267 (496)
T ss_dssp CCBTTTBC-TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT
T ss_pred ecccccCC-CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC
Confidence 98 565 99999864 378887554 2321 111 245789999999 7899999864
Q ss_pred CchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCC-------CCeE------------EEe--cccCCCcceE
Q 015463 197 TNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT-------TKQT------------TVL--LRNLQFPNGL 255 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~-------t~~~------------~~~--~~~~~~~ngi 255 (406)
.++|++||++ ++.. +.+ ......|.+|
T Consensus 268 --------------------------------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~i 315 (496)
T 3kya_A 268 --------------------------------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQI 315 (496)
T ss_dssp --------------------------------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEE
T ss_pred --------------------------------CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEE
Confidence 3789999997 5654 122 1223457899
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEeeCCCC--cceeeeec---CCC------------CCC-ceEEC-------CCCCEEE
Q 015463 256 SLSKDKSFFVFCEGSVGRLHKYWLIGEKA--GNLEAFAI---LPG------------YPD-NVRTN-------EKGEFWV 310 (406)
Q Consensus 256 ~l~~d~~~l~v~~t~~~~i~~~~~~g~~~--~~~~~~~~---l~g------------~pd-~i~~d-------~~G~lwv 310 (406)
+++++++.+|++++.+++|++++.++... .....++. ..| .|. +++.| .+|+|||
T Consensus 316 a~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV 395 (496)
T 3kya_A 316 FIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF 395 (496)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE
T ss_pred EEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE
Confidence 99999999999999999999988775321 11123321 112 366 67776 6789999
Q ss_pred EEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECC--------------CC--
Q 015463 311 AIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDS--------------KG-- 374 (406)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~--------------~g-- 374 (406)
+....+ .|.+++++|.+....-.. +|
T Consensus 396 aD~~N~--------------------------------------rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 396 VDRLNF--------------------------------------CVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp EEGGGT--------------------------------------EEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred EECCCC--------------------------------------EEEEEeCCCCEEEEecccccccccCccccccCCCCc
Confidence 986542 367788888665554321 22
Q ss_pred ---CeeeceeEEEEe--CCEEEEecCCCCeEEEEeCC
Q 015463 375 ---KVVKAISEVEEK--DGKLWMGSVLMPFVAVYDLS 406 (406)
Q Consensus 375 ---~~~~~~s~~~~~--~g~Ly~Gs~~~~~i~~~~~~ 406 (406)
..+...+.+... +|.||+....+++|.+++++
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 012345566544 38999999999999998763
No 40
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.59 E-value=1.3e-13 Score=145.85 Aligned_cols=187 Identities=15% Similarity=0.101 Sum_probs=117.4
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEeCC-----ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 72 ESMAFDPLGRGPYTGVADGRILFWDGL-----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~I~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
.+|+.|++|+ +|+|+. +++++++.. .++.+.... . ...........|..|. +|+||
T Consensus 327 ~~i~~D~~g~-lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~-~---------------~~~l~~~~v~~i~~d~-~g~lW 387 (758)
T 3ott_A 327 YSLFRDSKGF-YWFGGA-NGLIRFTDPAGERHDAIWYRMGD-K---------------TYPLSHNRIRHIYEDK-EQQLW 387 (758)
T ss_dssp EEEEECTTCC-EEEEET-TEEEEESCTTSSCCCCEEECTTC-S---------------SSCCSCSCEEEEEECT-TSCEE
T ss_pred EEEEEcCCCC-EEEeeC-CcceeecccccccceeEEeccCC-c---------------CCCCCCCceEEEEECC-CCCEE
Confidence 5788899999 999995 579999765 122221100 0 0001124467888998 89999
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccC-C-cccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAE-G-VPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~-~-~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
|++. .||+++++++++++.+..... + .+...+.+++.|++|+||+++..
T Consensus 388 igt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~---------------------------- 438 (758)
T 3ott_A 388 IATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL---------------------------- 438 (758)
T ss_dssp EEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS----------------------------
T ss_pred EEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC----------------------------
Confidence 9994 699999999988876642211 1 12345778999999999999853
Q ss_pred ccCCCCeEEEEeCCC------CeEE---Ee--cccCCC--cceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee
Q 015463 225 ITKDTGRVLKYDPTT------KQTT---VL--LRNLQF--PNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA 291 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t------~~~~---~~--~~~~~~--~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~ 291 (406)
++|++||+++ +.+. .+ ..++.. ...+..++++. +|+...+.++|.+++.+. +..+.+.
T Consensus 439 -----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~---~~~~~~~ 509 (758)
T 3ott_A 439 -----GGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRT---REVTKLF 509 (758)
T ss_dssp -----SCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTT---TEEEEEC
T ss_pred -----CceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCC---CceEEec
Confidence 5699998763 2221 11 122322 23455555564 666222247899998642 3333332
Q ss_pred -c-CC--CCCCceEECCCCCEEEEEccC
Q 015463 292 -I-LP--GYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 292 -~-l~--g~pd~i~~d~~G~lwv~~~~~ 315 (406)
+ +. ..+..+..|++|+||+++..+
T Consensus 510 ~~~~~~~~~~~~i~~d~~g~lWigt~~G 537 (758)
T 3ott_A 510 ADELTGEKSPNYLLCDEDGLLWVGFHGG 537 (758)
T ss_dssp TTTSCGGGCEEEEEECTTSCEEEEETTE
T ss_pred CCCcCCCcccceEEECCCCCEEEEecCc
Confidence 1 11 234457889999999999655
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=8.3e-14 Score=129.05 Aligned_cols=184 Identities=14% Similarity=0.279 Sum_probs=130.8
Q ss_pred cccCcceEEE-cCCCCeeEEEec--CCEEEEEeCC-cee-EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 67 QIQGPESMAF-DPLGRGPYTGVA--DGRILFWDGL-KWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 67 ~~~gpe~i~~-d~~g~~ly~g~~--~g~I~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
.+..|.++++ +++|+ +|++.. +++|.+++.+ ... .+. . .....|.+|++++
T Consensus 75 ~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~g~~~~~~~--~--------------------~~~~~~~~i~~~~- 130 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQYGQFVRKFG--A--------------------TILQHPRGVTVDN- 130 (286)
T ss_dssp CBSSEEEEEEETTTTE-EEEEECGGGCEEEEECTTSCEEEEEC--T--------------------TTCSCEEEEEECT-
T ss_pred cccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCCCcEEEEec--C--------------------ccCCCceEEEEeC-
Confidence 4567999999 57777 777764 7899999866 322 220 0 0124689999999
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
+|++||++.. +.|+++++++..+..+... ..+..|++++++++|++|+++..
T Consensus 131 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~------------------------ 183 (286)
T 1q7f_A 131 KGRIIVVECKVMRVIIFDQNGNVLHKFGCS---KHLEFPNGVVVNDKQEIFISDNR------------------------ 183 (286)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEEECT---TTCSSEEEEEECSSSEEEEEEGG------------------------
T ss_pred CCCEEEEECCCCEEEEEcCCCCEEEEeCCC---CccCCcEEEEECCCCCEEEEECC------------------------
Confidence 8999999875 5799999876655544221 23456899999999999999853
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEeccc--CCCcceEEEecCCCEEEEEeCCCC-eEEEEEeeCCCCcceeeeec-C-CC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLLRN--LQFPNGLSLSKDKSFFVFCEGSVG-RLHKYWLIGEKAGNLEAFAI-L-PG 295 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~~ngi~l~~d~~~l~v~~t~~~-~i~~~~~~g~~~~~~~~~~~-l-~g 295 (406)
.++|.+||+++.....+... +..|.++++++|++ +|+++...+ +|.+|+.++. ....+.. . ..
T Consensus 184 --------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~---~~~~~~~~~~~~ 251 (286)
T 1q7f_A 184 --------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQ---LISALESKVKHA 251 (286)
T ss_dssp --------GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSC---EEEEEEESSCCS
T ss_pred --------CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCC---EEEEEcccCCCC
Confidence 26799999976555555322 46789999999985 888887765 9999986542 1222221 1 12
Q ss_pred CCCceEECCCCCEEEEEc
Q 015463 296 YPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 296 ~pd~i~~d~~G~lwv~~~ 313 (406)
.|.+++++++|++||+..
T Consensus 252 ~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLASK 269 (286)
T ss_dssp CEEEEEEETTTEEEEEET
T ss_pred cceeEEECCCCcEEEECC
Confidence 467899999999999953
No 42
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.58 E-value=1.2e-12 Score=124.09 Aligned_cols=198 Identities=12% Similarity=0.162 Sum_probs=134.3
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCC----CeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEG----GLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQ 203 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~----~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~ 203 (406)
..+|.|+++|+.++.||++|.. +.|+++++++ ...+.+.. ..+..|.++++|. +|+||+++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~------- 97 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV------- 97 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-------
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECC-------
Confidence 4669999999867899999986 5799999886 22222211 1245789999995 7799999864
Q ss_pred cccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeC
Q 015463 204 MQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIG 281 (406)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g 281 (406)
.++|.++++++...+.+. ..+..|++++++|++..+||++... ++|++++++|
T Consensus 98 -------------------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 98 -------------------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp -------------------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred -------------------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 367999999866655554 4678899999999888999999865 7999999876
Q ss_pred CCCcceeeee-cCCCCCCceEECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEE
Q 015463 282 EKAGNLEAFA-ILPGYPDNVRTNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKY 359 (406)
Q Consensus 282 ~~~~~~~~~~-~l~g~pd~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~ 359 (406)
.. .+.+. ..-..|+++++|+ +++||++..... .|.++
T Consensus 153 ~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~--------------------------------------~I~~~ 191 (316)
T 1ijq_A 153 VD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH--------------------------------------SISSI 191 (316)
T ss_dssp CC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEE
T ss_pred CC---eEEEEECCCCCceEEEEeccCCEEEEEECCCC--------------------------------------eEEEE
Confidence 32 22333 2235699999995 567999875431 25556
Q ss_pred CCCCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 360 SPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 360 d~~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.+|+..+.+....+. .....++...+++||+....++.|.+++.
T Consensus 192 d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 192 DVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 6666444443221111 11223344456788888877778877763
No 43
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.57 E-value=3e-13 Score=143.13 Aligned_cols=228 Identities=18% Similarity=0.226 Sum_probs=145.1
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..+|+.|++|+ ||+|+ +++|++++.+ .++.+...... ..........|..|. +|+|||+
T Consensus 375 v~~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~----------------~~~~~~~v~~i~~d~-~g~lWig 435 (758)
T 3ott_A 375 IRHIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNT----------------GTYNTNWTYYIFEDT-AGQLWIS 435 (758)
T ss_dssp EEEEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC------------------CBSSSEEEEEECT-TSEEEEE
T ss_pred eEEEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCc----------------CCCCCceEEEEEEcC-CCCEEEE
Confidence 46788999998 99999 5689999976 55555432110 000123466788888 8999999
Q ss_pred eCCCcEEEEeCCC------CeEE---EcccccCCcccccccceEEcCCCCEEE--EeCCCchhhhccccccccccccccC
Q 015463 149 DAYFGLMKVGPEG------GLAT---SLATEAEGVPLRFTNDLDIDDEGNVYF--TDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 149 d~~~gl~~~d~~~------~~~~---~l~~~~~~~~~~~~~~l~~d~dG~ly~--t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
+..+||+++++++ +.+. .+. ...+.+...+.++..|++|+||+ ++.
T Consensus 436 T~~~Gl~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~i~~i~~d~~g~lWi~~~t~---------------------- 492 (758)
T 3ott_A 436 TCLGGIFVVDKHKLMQSTSGQYIAEQNYS-VHNGLSGMFINQIIPDNEGNVWVLLYNN---------------------- 492 (758)
T ss_dssp ESSSCEEEEEHHHHHHCCSSEEECSEEEC-GGGTCSCSCEEEEEECTTSCEEEEETTC----------------------
T ss_pred ECCCceEEEccccccccCCcceecccccc-cccccccceeeeEEEcCCCCEEEEccCC----------------------
Confidence 9888999999763 2221 111 11233334678899999999999 432
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecc-cC---CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLR-NL---QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL 293 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~---~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l 293 (406)
++|++||+++++++.+.. .+ ..++.+..+.++. +|++. .++|.+|+.+.. ..+.+. .
T Consensus 493 ------------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-lWigt--~~Gl~~~~~~~~---~~~~~~-~ 553 (758)
T 3ott_A 493 ------------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGL-LWVGF--HGGVMRINPKDE---SQQSIS-F 553 (758)
T ss_dssp ------------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSC-EEEEE--TTEEEEECC--C---CCCBCC-C
T ss_pred ------------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCC-EEEEe--cCceEEEecCCC---ceEEec-c
Confidence 459999999998887642 22 1234566665564 66664 358999986532 222222 2
Q ss_pred CCCCCc----eEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEE
Q 015463 294 PGYPDN----VRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVL 369 (406)
Q Consensus 294 ~g~pd~----i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~ 369 (406)
.|+|.+ +..+ +|+||+++..+ +.+||++...+..+
T Consensus 554 ~gl~~~~i~~i~~~-~g~lWi~t~~G----------------------------------------l~~~~~~~~~~~~~ 592 (758)
T 3ott_A 554 GSFSNNEILSMTCV-KNSIWVSTTNG----------------------------------------LWIIDRKTMDARQQ 592 (758)
T ss_dssp CC---CCEEEEEEE-TTEEEEEESSC----------------------------------------EEEEETTTCCEEEC
T ss_pred cCCCccceEEEEEC-CCCEEEECCCC----------------------------------------eEEEcCCCceeEEe
Confidence 355543 4445 89999999766 78888887766666
Q ss_pred ECCCCCeeeceeEEEE-eCCEEEEecCCCCeEEEEeC
Q 015463 370 EDSKGKVVKAISEVEE-KDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 370 ~~~~g~~~~~~s~~~~-~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.-+++. +. ..+.. .+|+||+|+. +++.+++.
T Consensus 593 ~~~~~~-~~--~~~~~~~~G~l~fG~~--~Gl~~f~p 624 (758)
T 3ott_A 593 NMTNKR-FT--SLLFDPKEDCVYLGGA--DGFGISHS 624 (758)
T ss_dssp --CCCC-CS--EEEEETTTTEEEEECB--SEEEEEEC
T ss_pred cCCCCc-ee--eeEEECCCCcEEEecC--CceEEECh
Confidence 434432 11 22333 4899999995 68887764
No 44
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.56 E-value=1.1e-12 Score=135.34 Aligned_cols=192 Identities=17% Similarity=0.112 Sum_probs=142.3
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
.++..|.+|++|+ +|.++|+....++|+|++.+ ..+.+.. ...+.|.||++|...
T Consensus 346 ~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~----------------------~~~~~p~GlAvD~~~ 403 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT----------------------AQIAHPDGIAVDWVA 403 (619)
T ss_dssp SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------------SSCSCCCEEEEETTT
T ss_pred cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEE----------------------CCCCCcCceEEeccc
Confidence 4567788999997 56666777888999999877 3333321 113679999999657
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++||++|.. +.|.+++.++...+.+.. ..+..|++|++|+ +|.||++|.+.
T Consensus 404 ~~lY~tD~~~~~I~v~~~~G~~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g~----------------------- 456 (619)
T 3s94_A 404 RNLYWTDTGTDRIEVTRLNGTMRKILIS----EDLEEPRAIVLDPMVGYMYWTDWGE----------------------- 456 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC----TTCCSEEEEEEETTTTEEEEEECSS-----------------------
T ss_pred CcEEEEeCCCCcEEEEeCCCCeEEEEEE----CCCCCeeeEEEEcCCCcEEEecCCC-----------------------
Confidence 899999987 568888888775555432 2367899999998 59999999641
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
.++|.+.+.++...+.+. ..+..|+||+++++++.|||+++..++|.+++++|... ..++......|.+
T Consensus 457 --------~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~--~~~~~~~l~~P~g 526 (619)
T 3s94_A 457 --------IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR--RVLVEDKIPHIFG 526 (619)
T ss_dssp --------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEEECCCCSSCC
T ss_pred --------CCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCce--EEEeccCCCCcEE
Confidence 367999988755444443 46889999999999999999999999999999986422 2223233346999
Q ss_pred eEECCCCCEEEEEccCCc
Q 015463 300 VRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~ 317 (406)
++++.+ .+|++....+.
T Consensus 527 lav~~~-~ly~tD~~~~~ 543 (619)
T 3s94_A 527 FTLLGD-YVYWTDWQRRS 543 (619)
T ss_dssp EEEETT-EEEEECTTSSC
T ss_pred EEEECC-EEEEeecCCCe
Confidence 999754 89998765433
No 45
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.54 E-value=2e-12 Score=126.58 Aligned_cols=197 Identities=12% Similarity=0.165 Sum_probs=134.6
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCe----EEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQ 203 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~----~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~ 203 (406)
...|.+|++|..++.||++|.. +.|+++++++.. ...+. ...+..|.+|++|. .|+||+++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~----~~~~~~p~glavD~~~~~lY~~d~~------- 179 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV------- 179 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE----CSSCSCEEEEEEETTTTEEEEEETT-------
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE----eCCCCCcccEEEEecCCceEEEECC-------
Confidence 4568999999867899999986 569999987632 22222 12345789999997 7899999964
Q ss_pred cccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeC
Q 015463 204 MQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIG 281 (406)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g 281 (406)
.++|.+++++++..+.+. ..+..|++|+++|.+..+||++... .+|++++++|
T Consensus 180 -------------------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 180 -------------------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp -------------------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred -------------------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 368999999877666554 4778899999999888999999763 7899999886
Q ss_pred CCCcceeeee-cCCCCCCceEECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEE
Q 015463 282 EKAGNLEAFA-ILPGYPDNVRTNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKY 359 (406)
Q Consensus 282 ~~~~~~~~~~-~l~g~pd~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~ 359 (406)
.. ...+. ..-..|.+|++|. +++||++..... .|.++
T Consensus 235 ~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~--------------------------------------~I~~~ 273 (400)
T 3p5b_L 235 VD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH--------------------------------------SISSI 273 (400)
T ss_dssp CS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEE
T ss_pred Cc---cEEEEECCCCceEEEEEEeCCCEEEEEECCCC--------------------------------------EEEEE
Confidence 32 22232 2235699999994 567999875431 25556
Q ss_pred CCCCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEe
Q 015463 360 SPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYD 404 (406)
Q Consensus 360 d~~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~ 404 (406)
|.+|...+.+....+. .....++...+++||+....++.|.+++
T Consensus 274 d~dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 274 DVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ETTSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred eCCCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 6666544443322111 1123344446778888877777777776
No 46
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=4.6e-13 Score=127.26 Aligned_cols=148 Identities=18% Similarity=0.266 Sum_probs=109.2
Q ss_pred cCCcceEEEEeCCCCcEEEEeCCC-------------------------cEEEEeCCCCeEEEcccccCCcccccccceE
Q 015463 129 ICGRPLGLRFDKKTGDLYIADAYF-------------------------GLMKVGPEGGLATSLATEAEGVPLRFTNDLD 183 (406)
Q Consensus 129 ~~~~p~gi~~d~~~g~L~Vad~~~-------------------------gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~ 183 (406)
..+.|.+|++++ +|++||++..+ .|+++|++++++.... ....+..|++++
T Consensus 22 ~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~---~~~~~~~p~gia 97 (329)
T 3fvz_A 22 LPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS---GKNLFYLPHGLS 97 (329)
T ss_dssp CCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE---CTTTCSSEEEEE
T ss_pred ecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc---CCCccCCceEEE
Confidence 367799999999 89999999875 4999999877664321 223466899999
Q ss_pred EcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--eEEEec---------ccCCCc
Q 015463 184 IDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--QTTVLL---------RNLQFP 252 (406)
Q Consensus 184 ~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--~~~~~~---------~~~~~~ 252 (406)
++++|++|+++.. .++|++||+++. .+..+. ..+..|
T Consensus 98 ~d~~g~l~v~d~~--------------------------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P 145 (329)
T 3fvz_A 98 IDTDGNYWVTDVA--------------------------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQP 145 (329)
T ss_dssp ECTTSCEEEEETT--------------------------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred ECCCCCEEEEECC--------------------------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCC
Confidence 9999999999864 367999998765 344442 335579
Q ss_pred ceEEEecCCCEEEEEeC-CCCeEEEEEeeCCCCcceeeeec-C---------CCCCCceEECCC-CCEEEEEccC
Q 015463 253 NGLSLSKDKSFFVFCEG-SVGRLHKYWLIGEKAGNLEAFAI-L---------PGYPDNVRTNEK-GEFWVAIHCR 315 (406)
Q Consensus 253 ngi~l~~d~~~l~v~~t-~~~~i~~~~~~g~~~~~~~~~~~-l---------~g~pd~i~~d~~-G~lwv~~~~~ 315 (406)
++|++++++..+|++++ ..++|.+++.+|.. ...+.. . ...|.++++|++ |++||+....
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTSCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 99999995556999997 68899999865431 111211 0 124889999998 8999998654
No 47
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=1.2e-12 Score=128.47 Aligned_cols=191 Identities=18% Similarity=0.252 Sum_probs=133.6
Q ss_pred ccCcceEEEcCCCCeeEEEecCC--EEEEEeCC-cee--EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 68 IQGPESMAFDPLGRGPYTGVADG--RILFWDGL-KWT--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~~g--~I~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
...|. ++++++|+.+|+...++ +|++++.. .+. .+.... .....+|.++++++++
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~-------------------~~~~~~p~~iav~p~~ 230 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLG-------------------STFSGKIGAVALDETE 230 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECC-------------------TTSCSCCCBCEECTTS
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeecc-------------------chhcCCcEEEEEeCCC
Confidence 45677 99999998888887655 89999876 322 221100 1124678999999877
Q ss_pred CcEEEEeCCCcEEEEeCCCCeEEEcccc-cCCccccccc-ceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 143 GDLYIADAYFGLMKVGPEGGLATSLATE-AEGVPLRFTN-DLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 143 g~L~Vad~~~gl~~~d~~~~~~~~l~~~-~~~~~~~~~~-~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
|+||+++..+.|+++|++++....+... ..+.....|. ++++++ +|+||+++..
T Consensus 231 g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~----------------------- 287 (409)
T 3hrp_A 231 EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN----------------------- 287 (409)
T ss_dssp SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------------
T ss_pred CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------------
Confidence 9999988766799999998876554211 1111112244 999999 6899999864
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEecc-c--------------CCCcceEEEecCCCEEEEEeC-CCCeEEEEEeeCCC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLLR-N--------------LQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIGEK 283 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~--------------~~~~ngi~l~~d~~~l~v~~t-~~~~i~~~~~~g~~ 283 (406)
.++|++++++.. ...+.. . +..|+|+++++|++ +|++++ .+++|.++++..
T Consensus 288 ---------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~-- 354 (409)
T 3hrp_A 288 ---------LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD-- 354 (409)
T ss_dssp ---------TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT--
T ss_pred ---------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC--
Confidence 367999998744 444332 1 56799999999997 999999 899999998432
Q ss_pred CcceeeeecC---------------CCCCCceEECCCCCEEEEEccC
Q 015463 284 AGNLEAFAIL---------------PGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 284 ~~~~~~~~~l---------------~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
+....+... -..|.++++|++|+|||+....
T Consensus 355 -G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 355 -GYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp -TEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred -CEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 222222211 1358899999999999998655
No 48
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.53 E-value=6.7e-13 Score=136.94 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=136.9
Q ss_pred eccCcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC-c--eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 63 KFLNQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL-K--WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 63 ~~~~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
+...++..|.+|++++ ++.++|+...+++|.+++.+ . .+.+.. .....|.||++
T Consensus 34 ~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~----------------------~~~~~P~GlAv 91 (619)
T 3s94_A 34 IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----------------------SGLLSPDGLAC 91 (619)
T ss_dssp --CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC----------------------SSCSCEEEEEE
T ss_pred EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe----------------------CCCCCcCeEEE
Confidence 3445678899999997 45566778888999999876 2 122211 11356999999
Q ss_pred eCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhcccccccccccccc
Q 015463 139 DKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 139 d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
|..+++||+++.. +.|.+++.++...+.+.. ..+..|++|++|+ +|.||+||..
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g-------------------- 147 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWG-------------------- 147 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCCEEEETTTTEEEEEECS--------------------
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCceEEEecCCCeEEEeccC--------------------
Confidence 9867899999987 568899998876555542 2356799999998 5899999953
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CC
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LP 294 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~ 294 (406)
..++|.+.++++...+.+. ..+..|+||+++++++.|||+++..++|++++++|.. .+.+.. ..
T Consensus 148 -----------~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~ 213 (619)
T 3s94_A 148 -----------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSL 213 (619)
T ss_dssp -----------SSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE---EC-------
T ss_pred -----------CCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCC
Confidence 1367999998865555554 5788999999999999999999999999999988632 222222 23
Q ss_pred CCCCceEECCCCCEEEEEcc
Q 015463 295 GYPDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 295 g~pd~i~~d~~G~lwv~~~~ 314 (406)
..|.+++++.+ ++|++...
T Consensus 214 ~~P~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 214 PHPFALTLFED-ILYWTDWS 232 (619)
T ss_dssp --CCCEEESSS-EEEEECTT
T ss_pred CCceEEEEeCC-EEEEecCC
Confidence 46999999866 77777543
No 49
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.52 E-value=1.2e-11 Score=117.86 Aligned_cols=213 Identities=14% Similarity=0.115 Sum_probs=133.2
Q ss_pred ccCcccCcceEEEcCCCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 64 FLNQIQGPESMAFDPLGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 64 ~~~~~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
+..++..|++|++.++|+ +|+... .|+|++++.+ ..+.+..... ......+.++||++++
T Consensus 27 va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~----------------v~~~g~~GllGia~~P 89 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPG----------------VSPSGEGGLLGIALSP 89 (347)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTT----------------CCCBTTBSEEEEEECT
T ss_pred eecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCc----------------eeecCCCCceeeEecc
Confidence 355789999999999999 777766 8999999865 3333322110 0111246699999997
Q ss_pred C---CCcEEEEeC---CCcEEEEeCCCC--------eEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccc
Q 015463 141 K---TGDLYIADA---YFGLMKVGPEGG--------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQK 206 (406)
Q Consensus 141 ~---~g~L~Vad~---~~gl~~~d~~~~--------~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~ 206 (406)
+ ++.||++.+ .+.|.|+..+.+ ..+.+..........+...|++++||.|||+.........
T Consensus 90 df~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~---- 165 (347)
T 3das_A 90 DYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGL---- 165 (347)
T ss_dssp THHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGG----
T ss_pred ccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCcc----
Confidence 3 588999743 357999977652 1233332222233457788999999999999643111000
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEEeCCCC--------eEEEecccCCCcceEEEecCCCEEEEEeCCCC---eEE
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG---RLH 275 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~---~i~ 275 (406)
.++. ....|+|+|+++++. ..+++..++.+|+|+++++++ .||++|.... .|.
T Consensus 166 ----~qd~-----------~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G-~L~~~d~g~~~~deln 229 (347)
T 3das_A 166 ----SQDR-----------KSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQ-RLFASEFGQDTWDELN 229 (347)
T ss_dssp ----TTCT-----------TCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTC-CEEEEECCSSSCEEEE
T ss_pred ----ccCC-----------CCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCC-CEEEEecCCCCCceee
Confidence 0000 223588999999854 346778899999999999976 5899997653 344
Q ss_pred EEEeeCCCCcceee------------eecC-C--CCCCceEECCCCCEEEEEccC
Q 015463 276 KYWLIGEKAGNLEA------------FAIL-P--GYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 276 ~~~~~g~~~~~~~~------------~~~l-~--g~pd~i~~d~~G~lwv~~~~~ 315 (406)
++. .|.+.|.... .... + .-|.++++. +|.+|++...+
T Consensus 230 ~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~ 282 (347)
T 3das_A 230 AIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRG 282 (347)
T ss_dssp EEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTT
T ss_pred EEc-CCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccC
Confidence 432 3333322111 0010 1 135577775 57888876543
No 50
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.50 E-value=2.6e-12 Score=120.49 Aligned_cols=200 Identities=13% Similarity=0.078 Sum_probs=128.0
Q ss_pred cCcccCcceEEEcCCCCeeEEEe-cCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE---
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGV-ADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF--- 138 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~--- 138 (406)
...-..||++.+|+....+|++. ++|+|.++++. ..+++ ... +... .......|.||.+
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~-~~s~-------------~g~~~~~~sGl~~~~~ 73 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VID-GASS-------------NGDGEQQMSGLSLLTH 73 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCT-TTCC-------------SSCCSEEEEEEEESSS
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecC-Cccc-------------cCCCcceeeEEEEecc
Confidence 34446899999997555588876 78999999987 33333 211 1000 0001234789999
Q ss_pred eCCCCcEEEE-eC-------------CCcEEEEeCC---CCeEEEcccc---cC------CcccccccceEEcCCCCEEE
Q 015463 139 DKKTGDLYIA-DA-------------YFGLMKVGPE---GGLATSLATE---AE------GVPLRFTNDLDIDDEGNVYF 192 (406)
Q Consensus 139 d~~~g~L~Va-d~-------------~~gl~~~d~~---~~~~~~l~~~---~~------~~~~~~~~~l~~d~dG~ly~ 192 (406)
|+ +|+|||+ +. ...|+++|++ +++....... .. +.....+|++++|++|++|+
T Consensus 74 D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYV 152 (334)
T 2p9w_A 74 DN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYV 152 (334)
T ss_dssp SS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEE
T ss_pred CC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEE
Confidence 78 6999994 42 3569999988 5543322211 11 11334699999999999999
Q ss_pred EeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec------ccCCCcceEEEecCCCEEEE
Q 015463 193 TDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL------RNLQFPNGLSLSKDKSFFVF 266 (406)
Q Consensus 193 t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~------~~~~~~ngi~l~~d~~~l~v 266 (406)
+++. +.+.|++++++......+. .....+|||++.||++.|++
T Consensus 153 t~s~-------------------------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv 201 (334)
T 2p9w_A 153 AFAL-------------------------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIA 201 (334)
T ss_dssp EEEE-------------------------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEE
T ss_pred eCCC-------------------------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEE
Confidence 9852 1167999999866555432 12344789999999999999
Q ss_pred EeCCCCeEEEEEeeCCCCcceeee--e---cCCCCCCce-EECCCCCE-EEEEc
Q 015463 267 CEGSVGRLHKYWLIGEKAGNLEAF--A---ILPGYPDNV-RTNEKGEF-WVAIH 313 (406)
Q Consensus 267 ~~t~~~~i~~~~~~g~~~~~~~~~--~---~l~g~pd~i-~~d~~G~l-wv~~~ 313 (406)
.++ .++|+++++..+..-...+- . .+. .|++| ....+|++ +|+..
T Consensus 202 ~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~-~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 202 FGG-PRALTAFDVSKPYAWPEPVKINGDFGTLS-GTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp ESS-SSSEEEEECSSSSCCCEECEESSCCCCCT-TEEEEEEEEETTEEEEEEEE
T ss_pred EcC-CCeEEEEcCCCCcceeecccccCCccccc-CcccccccccCCEEEEEEcC
Confidence 998 89999999873211001000 0 112 36775 55668886 66553
No 51
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.50 E-value=8e-12 Score=131.84 Aligned_cols=197 Identities=12% Similarity=0.157 Sum_probs=134.0
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCe----EEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhhc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQ 203 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~----~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~ 203 (406)
...|.+|+++..+++||++|.. +.|++++.++.. .+.+. ...+..|.+|++|..+ +||++++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi----~~~l~~P~GLAvD~~~~~LY~tD~~------- 491 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV------- 491 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE----CSSCSCCCEEEEETTTTEEEEEETT-------
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE----ecCCCCcceeeeeecCCcEEEEecC-------
Confidence 3568999999867899999987 468999987632 12221 2235679999999754 99999964
Q ss_pred cccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeC
Q 015463 204 MQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIG 281 (406)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g 281 (406)
.++|.++++++...+++. ..+..|++|++++.+..|||++... .+|++++++|
T Consensus 492 -------------------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 492 -------------------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp -------------------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred -------------------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 368999999877666654 5678899999999988999999765 7999999876
Q ss_pred CCCcceeeee-cCCCCCCceEEC-CCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEE
Q 015463 282 EKAGNLEAFA-ILPGYPDNVRTN-EKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKY 359 (406)
Q Consensus 282 ~~~~~~~~~~-~l~g~pd~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~ 359 (406)
.. ...+. .....|.+|++| .+|+||++..... .|.++
T Consensus 547 ~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~--------------------------------------~I~~~ 585 (791)
T 3m0c_C 547 VD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH--------------------------------------SISSI 585 (791)
T ss_dssp CC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEE
T ss_pred Cc---eEEEEeCCCCCceEEEEecCCCeEEEEeCCCC--------------------------------------cEEEE
Confidence 32 22333 223569999999 5677999875431 14455
Q ss_pred CCCCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEe
Q 015463 360 SPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYD 404 (406)
Q Consensus 360 d~~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~ 404 (406)
+.+|.....+....+. .....++...+++||+....++.|.+++
T Consensus 586 d~dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 586 DVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ecCCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 5665444333322221 1122344446667777777777777765
No 52
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.49 E-value=2.2e-11 Score=114.62 Aligned_cols=214 Identities=14% Similarity=0.124 Sum_probs=132.9
Q ss_pred CCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEEe
Q 015463 79 LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKVG 158 (406)
Q Consensus 79 ~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~d 158 (406)
+|+ +|+++.+++|++++.+....+..... ......+++++ +|+||+++..++|+++|
T Consensus 107 ~~~-l~v~t~~~~l~~~d~~g~~~~~~~~~---------------------~~~~~~~~~~~-~g~l~vgt~~~~l~~~d 163 (330)
T 3hxj_A 107 EDI-LYVTSMDGHLYAINTDGTEKWRFKTK---------------------KAIYATPIVSE-DGTIYVGSNDNYLYAIN 163 (330)
T ss_dssp TTE-EEEECTTSEEEEECTTSCEEEEEECS---------------------SCCCSCCEECT-TSCEEEECTTSEEEEEC
T ss_pred CCE-EEEEecCCEEEEEcCCCCEEEEEcCC---------------------CceeeeeEEcC-CCEEEEEcCCCEEEEEC
Confidence 555 89998888899998762111111110 01122346676 78899998778999999
Q ss_pred CCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCC
Q 015463 159 PEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT 238 (406)
Q Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~ 238 (406)
+++.....+.. . ...+..+++|++|++|+++ . +|+++|++
T Consensus 164 ~~g~~~~~~~~--~---~~~~~~~~~d~~g~l~v~t-~----------------------------------~l~~~d~~ 203 (330)
T 3hxj_A 164 PDGTEKWRFKT--N---DAITSAASIGKDGTIYFGS-D----------------------------------KVYAINPD 203 (330)
T ss_dssp TTSCEEEEEEC--S---SCCCSCCEECTTCCEEEES-S----------------------------------SEEEECTT
T ss_pred CCCCEeEEEec--C---CCceeeeEEcCCCEEEEEe-C----------------------------------EEEEECCC
Confidence 88333222221 1 2245677888899999986 3 49999954
Q ss_pred CCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCCEEEEEccCCcc
Q 015463 239 TKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 239 t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
+...............+++++++. +|++.. .+.|++++.++. ....+....+.+..+.+|.+|++|+++..+
T Consensus 204 g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~~gl~~~~~~g~---~~~~~~~~~~~~~~~~~~~~g~l~v~t~~g--- 275 (330)
T 3hxj_A 204 GTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-DGHLYAINPDGT---EKWRFKTGKRIESSPVIGNTDTIYFGSYDG--- 275 (330)
T ss_dssp SCEEEEECCSSCCCSCCEECTTSC-EEEEET-TTEEEEECTTSC---EEEEEECSSCCCSCCEECTTSCEEEECTTC---
T ss_pred CcEEEEEccCCcceeceEECCCCe-EEEEcC-CCeEEEECCCCC---EeEEeeCCCCccccceEcCCCeEEEecCCC---
Confidence 333333333333455677777764 666643 578988864332 111222223345667888899999998653
Q ss_pred hhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeeceeEEEE-eCCEEEEecCCC
Q 015463 319 YSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEE-KDGKLWMGSVLM 397 (406)
Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~~s~~~~-~~g~Ly~Gs~~~ 397 (406)
.+.++|++|+.+..+..+.. .+.++.. .+|+||+|+. +
T Consensus 276 ------------------------------------gl~~~d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~-~ 314 (330)
T 3hxj_A 276 ------------------------------------HLYAINPDGTEKWNFETGSW----IIATPVIDENGTIYFGTR-N 314 (330)
T ss_dssp ------------------------------------EEEEECTTSCEEEEEECSSC----CCSCCEECTTCCEEEECT-T
T ss_pred ------------------------------------CEEEECCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcC-C
Confidence 38889999998888764322 2344444 7899999996 4
Q ss_pred CeEEEEe
Q 015463 398 PFVAVYD 404 (406)
Q Consensus 398 ~~i~~~~ 404 (406)
..+...+
T Consensus 315 G~~~~~~ 321 (330)
T 3hxj_A 315 GKFYALF 321 (330)
T ss_dssp SCEEEEE
T ss_pred CeEEEEe
Confidence 4444443
No 53
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.49 E-value=1.2e-12 Score=123.83 Aligned_cols=185 Identities=15% Similarity=0.197 Sum_probs=126.9
Q ss_pred cCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
..|.+|++++ +|+ ||++...++|++++.+ .++.+...... .....|.++++++++|+|
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~------------------~~~~~p~~i~~d~~~G~l 140 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDG------------------VPFKWLYAVTVDQRTGIV 140 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETT------------------EECSCEEEEEECTTTCCE
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCC------------------CcccccceEEEecCCCEE
Confidence 4689999997 777 8988777789999876 33444321100 113568999999745899
Q ss_pred EEEeCC------------------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhcccc
Q 015463 146 YIADAY------------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQK 206 (406)
Q Consensus 146 ~Vad~~------------------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~ 206 (406)
||++.. .+|+++|+++++++.+.. .+..|++|+++++|+ ||++++.
T Consensus 141 ~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~dg~~lyv~d~~---------- 205 (322)
T 2fp8_A 141 YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----ELHVPGGAEVSADSSFVLVAEFL---------- 205 (322)
T ss_dssp EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----EESCCCEEEECTTSSEEEEEEGG----------
T ss_pred EEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----CCccCcceEECCCCCEEEEEeCC----------
Confidence 999864 359999998887665432 245799999999986 9999853
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEEeCCC---CeEEEecccCCCcceEEEecCCCEEEEEeCC----------CCe
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTT---KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS----------VGR 273 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t---~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~----------~~~ 273 (406)
.++|++|+.++ ++.+.+.. +..|+|++++++|+ +|++... .++
T Consensus 206 ----------------------~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~ 261 (322)
T 2fp8_A 206 ----------------------SHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPK 261 (322)
T ss_dssp ----------------------GTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEE
T ss_pred ----------------------CCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccE
Confidence 26799999875 34444433 22399999999996 8888754 467
Q ss_pred EEEEEeeCCCCcceeeeecCC----CCCCceEECCCCCEEEEEccC
Q 015463 274 LHKYWLIGEKAGNLEAFAILP----GYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 274 i~~~~~~g~~~~~~~~~~~l~----g~pd~i~~d~~G~lwv~~~~~ 315 (406)
|.+++.+|. ..+.+..-. ..|.+++. .+|+|||+....
T Consensus 262 v~~~d~~G~---~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~ 303 (322)
T 2fp8_A 262 GIKFDEFGN---ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFH 303 (322)
T ss_dssp EEEECTTSC---EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSC
T ss_pred EEEECCCCC---EEEEEECCCCCccccceEEEE-eCCEEEEeecCC
Confidence 888886532 122232211 23556666 478999997543
No 54
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.49 E-value=3e-12 Score=135.12 Aligned_cols=193 Identities=14% Similarity=0.122 Sum_probs=137.4
Q ss_pred CcccCcceEEEcC-CCCeeEEEecCCEEEEEeCCcee---EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 66 NQIQGPESMAFDP-LGRGPYTGVADGRILFWDGLKWT---DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 66 ~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..+..|.+|++|. ++.++|+...+++|++++.+... .... ........|.||++|..
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~-------------------vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE-------------------EECSSCSCCCEEEEETT
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeE-------------------EEecCCCCcceeeeeec
Confidence 4577899999997 56667778888999999876210 0000 01112467999999985
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCC-CCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
.++||++|.. +.|.++++++...+.+... .+..|++|++|+. |.||++++..
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g~---------------------- 535 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT---------------------- 535 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------------
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeC----CCCCcceEEEecCCCCEEEecCCC----------------------
Confidence 6799999987 5699999998776665432 2456999999984 8999999641
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-C--CC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-L--PG 295 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l--~g 295 (406)
.++|.+++.++...+++. .++..|+||+++++++.|||++...++|++++++|.. ...+.. . -.
T Consensus 536 ---------~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~---~~~v~~~~~~l~ 603 (791)
T 3m0c_C 536 ---------PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLA 603 (791)
T ss_dssp ---------SCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTS
T ss_pred ---------CCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc---eEEEecCCCccC
Confidence 257999999866555554 5678999999999899999999999999999988642 222322 1 12
Q ss_pred CCCceEECCCCCEEEEEccCC
Q 015463 296 YPDNVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 296 ~pd~i~~d~~G~lwv~~~~~~ 316 (406)
.|.+|+++ .++||++.....
T Consensus 604 ~P~glav~-~~~lYwtD~~~~ 623 (791)
T 3m0c_C 604 HPFSLAVF-EDKVFWTDIINE 623 (791)
T ss_dssp SEEEEEEE-TTEEEEEETTTT
T ss_pred CCCEEEEe-CCEEEEEECCCC
Confidence 46677775 347888765443
No 55
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.48 E-value=1.3e-13 Score=144.32 Aligned_cols=195 Identities=14% Similarity=0.122 Sum_probs=133.9
Q ss_pred CcccCcceEEEcCC-CCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 66 NQIQGPESMAFDPL-GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 66 ~~~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
..+..|++|+++++ +.++|+...+++|++++.+.... ...... ........|.||++|..+++
T Consensus 403 ~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~----~~~~~~------------~i~~~~~~P~glavD~~~g~ 466 (699)
T 1n7d_A 403 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG----VSSYDT------------VISRDIQAPDGLAVDWIHSN 466 (699)
T ss_dssp CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-----CCCCC------------BCCSCC--CCCEECCCSSSB
T ss_pred ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCC----CcceEE------------EEeCCCCCcceEEEEeeCCc
Confidence 35678999999975 45555667778999998652000 000000 11112356899999965789
Q ss_pred EEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 145 LYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 145 L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
||+++.. +.|.+++++++..+.+... .+..|++|++|+ +|.||+++..
T Consensus 467 LY~tD~~~~~I~v~d~dg~~~~~l~~~----~~~~P~giavDp~~g~ly~td~~-------------------------- 516 (699)
T 1n7d_A 467 IYWTDSVLGTVSVADTKGVKRKTLFRE----QGSKPRAIVVDPVHGFMYWTDWG-------------------------- 516 (699)
T ss_dssp CEECCTTTSCEEEEBSSSCCEEEECCC----SSCCCCCEECCSSSSCCEECCCS--------------------------
T ss_pred EEEEeccCCeEEEEecCCCceEEEEeC----CCCCcceEEEccCCCcEEEcccC--------------------------
Confidence 9999876 5799999988766554321 245789999998 5799999853
Q ss_pred CcccCCCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec---CCCCCC
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---LPGYPD 298 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~---l~g~pd 298 (406)
..++|+++++++...+++ ...+..|+||+++++++.|||+++..++|++++++|. ..+.+.. ..+.|.
T Consensus 517 -----~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~ 588 (699)
T 1n7d_A 517 -----TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPF 588 (699)
T ss_dssp -----SSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCC
T ss_pred -----CCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCce
Confidence 125788888775444444 3568889999999999999999999999999998763 2233332 235699
Q ss_pred ceEECCCCCEEEEEccC
Q 015463 299 NVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 299 ~i~~d~~G~lwv~~~~~ 315 (406)
++++|.+ ++|++....
T Consensus 589 glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 589 SLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CCEEETT-EEEEECSTT
T ss_pred EeEEECC-EEEEEeCCC
Confidence 9999876 566665443
No 56
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=8.3e-12 Score=116.25 Aligned_cols=183 Identities=13% Similarity=0.154 Sum_probs=125.0
Q ss_pred ccCcceEEEcCCCCeeEEEec-CCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 68 IQGPESMAFDPLGRGPYTGVA-DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
...|.+++++++|+ +|++.. +++|++++.. +++.+..... .....+|.++++++ +|+
T Consensus 68 ~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~------------------~~~~~~~~~i~~d~-~G~ 127 (296)
T 3e5z_A 68 SHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWESIADSFE------------------GKKLNSPNDVCLAP-DGS 127 (296)
T ss_dssp CSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEEEEECEET------------------TEECCCCCCEEECT-TSC
T ss_pred CCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEEEEeeccC------------------CCCCCCCCCEEECC-CCC
Confidence 35689999999999 677665 5899999974 4444432110 01135688999999 899
Q ss_pred EEEEeC------------------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccc
Q 015463 145 LYIADA------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQK 206 (406)
Q Consensus 145 L~Vad~------------------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~ 206 (406)
||+++. ..+|++++++ ++++.+.. ....++++++++||+++++++.
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~gi~~s~dg~~lv~~~~---------- 191 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----DRVKPNGLAFLPSGNLLVSDTG---------- 191 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----CCSSEEEEEECTTSCEEEEETT----------
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec-----CCCCCccEEECCCCCEEEEeCC----------
Confidence 999764 2479999988 55554432 2346889999999988777653
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEEeCC-CCeE----EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT-TKQT----TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~-t~~~----~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.++|++|+.+ +++. +.+......|.++++++|++ +|++. .++|.+|+.+|
T Consensus 192 ----------------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g 246 (296)
T 3e5z_A 192 ----------------------DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDG 246 (296)
T ss_dssp ----------------------TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTS
T ss_pred ----------------------CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCC
Confidence 3678888875 4554 22222334678999999996 77876 68999998753
Q ss_pred CCCcceeeeecCCCCCCceEE-CCCCC-EEEEEccC
Q 015463 282 EKAGNLEAFAILPGYPDNVRT-NEKGE-FWVAIHCR 315 (406)
Q Consensus 282 ~~~~~~~~~~~l~g~pd~i~~-d~~G~-lwv~~~~~ 315 (406)
. ....+..-.+ |.++++ +++|+ ||+++..+
T Consensus 247 ~---~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 247 D---ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp C---EEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred C---EEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 2 1222222223 888888 46665 99998653
No 57
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.48 E-value=8.4e-12 Score=118.27 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=134.0
Q ss_pred CcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeE-EEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccc
Q 015463 131 GRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~ 207 (406)
..|.++.++..++.||++|.. +.|++++++++.. +.+.. ..+..|.++++|. +|+||+++..
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----~~l~~p~glavd~~~g~ly~~d~~----------- 99 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLSPDGLACDWLGEKLYWTDSE----------- 99 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE----ECCSCCCEEEEETTTTEEEEEETT-----------
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc----CCCCCccEEEEEcCCCeEEEEECC-----------
Confidence 457889999767899999986 5699999987632 11111 1245689999995 7899999864
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCC-CCeEEEEEeeCCCCc
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGEKAG 285 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~-~~~i~~~~~~g~~~~ 285 (406)
.++|.++++++...+.+. ..+..|+|+++++++..+||++.. ..+|++++++|..
T Consensus 100 ---------------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-- 156 (318)
T 3sov_A 100 ---------------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-- 156 (318)
T ss_dssp ---------------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS--
T ss_pred ---------------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC--
Confidence 368999999866555554 678889999999988899999965 5899999987632
Q ss_pred ceeeee-cCCCCCCceEECC-CCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCC
Q 015463 286 NLEAFA-ILPGYPDNVRTNE-KGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG 363 (406)
Q Consensus 286 ~~~~~~-~l~g~pd~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g 363 (406)
.+.+. ..-..|+++++|+ +++||++..... .|.+++.+|
T Consensus 157 -~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~--------------------------------------~I~~~d~dG 197 (318)
T 3sov_A 157 -RFIIINSEIYWPNGLTLDYEEQKLYWADAKLN--------------------------------------FIHKSNLDG 197 (318)
T ss_dssp -CEEEECSSCSCEEEEEEETTTTEEEEEETTTT--------------------------------------EEEEEETTS
T ss_pred -eEEEEECCCCCccEEEEeccCCEEEEEECCCC--------------------------------------EEEEEcCCC
Confidence 22232 2234699999996 677999975432 255556665
Q ss_pred CEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 364 KILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 364 ~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
...+.+.... .....++...++.||+....+..|.+++.
T Consensus 198 ~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 198 TNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp CSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 4433333211 11223344456677777777777777764
No 58
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.47 E-value=6.3e-12 Score=129.83 Aligned_cols=198 Identities=13% Similarity=0.132 Sum_probs=141.0
Q ss_pred cCcccCcceEEEcCC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 65 LNQIQGPESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..++..+-++++|+. +.++|+....++|++++.+ ....+..... ......+.|.||++|..
T Consensus 336 ~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~----------------~~~~~~~~p~glAvD~~ 399 (628)
T 4a0p_A 336 IHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSV----------------PSQNLEIQPYDLSIDIY 399 (628)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------------------CCCEEEEEEETT
T ss_pred ehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccc----------------ccccccCCcceEEeecc
Confidence 345667888999974 5667778888999999876 2223321100 00011457999999986
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
.++||++|.. +.|..++.++...+.+... .+..|++|++|+ +|.||+++..
T Consensus 400 ~~nLY~td~~~~~I~v~~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g----------------------- 452 (628)
T 4a0p_A 400 SRYIYWTCEATNVINVTRLDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQ----------------------- 452 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEE-----------------------
T ss_pred CCeEEEEcCCCCEEEEEECCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecC-----------------------
Confidence 6889999987 4577888876654444322 245799999998 8999999853
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYP 297 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~p 297 (406)
...++|++.++++...+.+. ..+..|+||+++++++.|||+++..++|.+++++|.. .+++. .....|
T Consensus 453 -------~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P 522 (628)
T 4a0p_A 453 -------ERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQP 522 (628)
T ss_dssp -------TTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCE
T ss_pred -------CCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCc
Confidence 11137999999866555554 4688999999999999999999998999999998742 33443 233569
Q ss_pred CceEECCCCCEEEEEccCC
Q 015463 298 DNVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 298 d~i~~d~~G~lwv~~~~~~ 316 (406)
.+++++. |++|++.....
T Consensus 523 ~glav~~-~~ly~tD~~~~ 540 (628)
T 4a0p_A 523 VGLTVFE-NWLYWIDKQQQ 540 (628)
T ss_dssp EEEEEET-TEEEEEETTTT
T ss_pred EEEEEEC-CEEEEEECCCC
Confidence 9999976 78988886543
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.46 E-value=9.8e-11 Score=110.82 Aligned_cols=191 Identities=14% Similarity=0.157 Sum_probs=127.7
Q ss_pred cCcceEEEcCCCCeeEEEec-------CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 69 QGPESMAFDPLGRGPYTGVA-------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~-------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
.+|.+++++++|+.+|++.. ++.|+.++....+..... .....|.+++++++
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---------------------~~~~~~~~~~~s~d 99 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---------------------HNDLKPFGATINNT 99 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---------------------EESSCCCSEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---------------------ecCCCcceEEECCC
Confidence 47889999999988888874 467999987622111111 01245788999993
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCc-----ccccccceEEcCCCC-EEEEeCCCchhhhcccccccccccc
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAEGV-----PLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~-----~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
++.+|+++.. +.|..+|.++++.........+. ....+.+++++++|+ +|+++..
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------------ 161 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------------------ 161 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES------------------
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC------------------
Confidence 3449999875 57999999888753322211111 112367899999986 7777621
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI- 292 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~- 292 (406)
..+.|+.+|.++++...... ....++++++++|++.+|++.. .+.|+.+++...+. ...+..
T Consensus 162 -------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~--~~~~~~~ 225 (353)
T 3vgz_A 162 -------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKI--LSRKKLL 225 (353)
T ss_dssp -------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEE--EEEEECC
T ss_pred -------------CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeE--EEEEEcC
Confidence 13679999999888766554 3445889999999999988865 67899988653211 111111
Q ss_pred ---CCCCCCceEECCCCC-EEEEEcc
Q 015463 293 ---LPGYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 293 ---l~g~pd~i~~d~~G~-lwv~~~~ 314 (406)
....+.+++++++|+ +|++...
T Consensus 226 ~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp CSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred CCCCCcccceEEECCCCCEEEEEeCC
Confidence 123455688999998 7777654
No 60
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=1.5e-11 Score=116.79 Aligned_cols=185 Identities=16% Similarity=0.091 Sum_probs=125.5
Q ss_pred cCcceEEEcCCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..|++++++ ++. +|+... ++.|..+|....+.+.... ....|.+|++++ +|.|||
T Consensus 44 ~~~~~i~~~-~~~-lyv~~~~~~~v~viD~~t~~~~~~i~---------------------~~~~p~~i~~~~-~g~lyv 99 (328)
T 3dsm_A 44 DVAQSMVIR-DGI-GWIVVNNSHVIFAIDINTFKEVGRIT---------------------GFTSPRYIHFLS-DEKAYV 99 (328)
T ss_dssp SCEEEEEEE-TTE-EEEEEGGGTEEEEEETTTCCEEEEEE---------------------CCSSEEEEEEEE-TTEEEE
T ss_pred ccceEEEEE-CCE-EEEEEcCCCEEEEEECcccEEEEEcC---------------------CCCCCcEEEEeC-CCeEEE
Confidence 457899885 344 777655 6889999987222221111 135589999987 689999
Q ss_pred Ee-CCCcEEEEeCCCCeEEEccc-ccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 148 AD-AYFGLMKVGPEGGLATSLAT-EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 148 ad-~~~gl~~~d~~~~~~~~l~~-~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
++ ..+.|.++|++++++..... .........|.++++ .++.+|+++.+
T Consensus 100 ~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------------------- 149 (328)
T 3dsm_A 100 TQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------------------- 149 (328)
T ss_dssp EEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT-----------------------------
T ss_pred EECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC-----------------------------
Confidence 99 55789999999887653221 111122346888998 57899999742
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC----------CeEEEEEeeCCCCcceeeeecCC-
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV----------GRLHKYWLIGEKAGNLEAFAILP- 294 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~----------~~i~~~~~~g~~~~~~~~~~~l~- 294 (406)
..+.|.++|++++++.........|+++++++|++ +|++.... ++|++++.+. ++.......+
T Consensus 150 --~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~ 223 (328)
T 3dsm_A 150 --YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKL 223 (328)
T ss_dssp --TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCT
T ss_pred --CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCC
Confidence 12679999999988765554456789999999987 66766543 6899998653 2222112232
Q ss_pred -CCCCceEECCCCC-EEEEEc
Q 015463 295 -GYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 295 -g~pd~i~~d~~G~-lwv~~~ 313 (406)
..|.+++++++|+ +|++..
T Consensus 224 g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS
T ss_pred CCCceeEEEecCCCEEEEEcc
Confidence 3689999998766 777653
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.42 E-value=1.7e-11 Score=114.44 Aligned_cols=183 Identities=14% Similarity=0.189 Sum_probs=125.7
Q ss_pred cCcceEEEcCC-CCeeEEEecCCEEEEEeCC-ceeEE-EeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGL-KWTDF-AFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
..|.+++++++ |+ +|+++..++|++++.+ ++..+ .... .......|.++++++ +|++
T Consensus 71 ~~~~~i~~~~~~g~-l~v~~~~~~l~~~d~~g~~~~~~~~~~------------------~~~~~~~~~~i~~d~-~g~l 130 (314)
T 1pjx_A 71 GIPAGCQCDRDANQ-LFVADMRLGLLVVQTDGTFEEIAKKDS------------------EGRRMQGCNDCAFDY-EGNL 130 (314)
T ss_dssp CCEEEEEECSSSSE-EEEEETTTEEEEEETTSCEEECCSBCT------------------TSCBCBCCCEEEECT-TSCE
T ss_pred CCCceEEEecCCCc-EEEEECCCCEEEEeCCCCEEEEEeccC------------------CCccccCCcCEEECC-CCCE
Confidence 56899999999 77 8888877789999976 33322 1100 001134588999999 8999
Q ss_pred EEEeCC----------------CcEEEEeCCCCeEEEcccccCCcccccccceEEc----CCC-CEEEEeCCCchhhhcc
Q 015463 146 YIADAY----------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDID----DEG-NVYFTDSSTNYQRRQM 204 (406)
Q Consensus 146 ~Vad~~----------------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d----~dG-~ly~t~~~~~~~~~~~ 204 (406)
|+++.. .+|++++++ ++++.+... ...+++++++ ++| .+|+++..
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-------- 196 (314)
T 1pjx_A 131 WITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETP-------- 196 (314)
T ss_dssp EEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETT--------
T ss_pred EEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECC--------
Confidence 999874 379999987 555543221 3357888998 999 68999753
Q ss_pred ccccccccccccCCCCCCCcccCCCCeEEEEeCC-CCeEE---Eec--cc-C-CCcceEEEecCCCEEEEEeCCCCeEEE
Q 015463 205 QKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT-TKQTT---VLL--RN-L-QFPNGLSLSKDKSFFVFCEGSVGRLHK 276 (406)
Q Consensus 205 ~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~-t~~~~---~~~--~~-~-~~~ngi~l~~d~~~l~v~~t~~~~i~~ 276 (406)
.++|++||.+ +++.. .+. .. . ..+.++++++|++ +|++....++|.+
T Consensus 197 ------------------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 197 ------------------------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEV 251 (314)
T ss_dssp ------------------------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEE
T ss_pred ------------------------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEE
Confidence 3679999865 45432 111 11 1 4578999999885 7788766789999
Q ss_pred EEee-CCCCcceeeeecCC-CCCCceEECCCCC-EEEEEcc
Q 015463 277 YWLI-GEKAGNLEAFAILP-GYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 277 ~~~~-g~~~~~~~~~~~l~-g~pd~i~~d~~G~-lwv~~~~ 314 (406)
++.+ +.. ...+ ..+ ..|.+++++++|+ +|++...
T Consensus 252 ~d~~~g~~---~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 252 FGPDGGQP---KMRI-RCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ECTTCBSC---SEEE-ECSSSCEEEEEECTTSSEEEEEETT
T ss_pred EcCCCCcE---eEEE-eCCCCCceeEEECCCCCEEEEEeCC
Confidence 9865 321 1122 222 4578899999999 9999865
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=1.4e-10 Score=110.20 Aligned_cols=194 Identities=15% Similarity=0.144 Sum_probs=123.7
Q ss_pred cccCcceEEEcCCCCeeEEEec---CCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 67 QIQGPESMAFDPLGRGPYTGVA---DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~---~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
....|..++++++|+ +|+... ++.|+.|+.+ ..+.+.... .....|.++++++
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--------------------~~~~~p~~~a~sp- 95 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV--------------------APGTPPAYVAVDE- 95 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE--------------------EESCCCSEEEEET-
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee--------------------cCCCCCEEEEECC-
Confidence 346899999999999 887765 4788888754 333332110 1135688999999
Q ss_pred CCc-EEEEeCC-CcEEEEeCC-CCeEEEcccc-cCCc------ccccccceEEcCCCCEEEEeCCCchhhhccccccccc
Q 015463 142 TGD-LYIADAY-FGLMKVGPE-GGLATSLATE-AEGV------PLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPL 211 (406)
Q Consensus 142 ~g~-L~Vad~~-~gl~~~d~~-~~~~~~l~~~-~~~~------~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 211 (406)
+|+ ||+++.. +.+..++.+ ++..+.+... ..+. ....+..+++++||++|+++..
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~--------------- 160 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG--------------- 160 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---------------
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC---------------
Confidence 565 8888854 457677753 3444433221 1111 1234678999999998888753
Q ss_pred cccccCCCCCCCcccCCCCeEEEEeCC-CCeEEEec----ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 212 QLCSSLNDPSPIKITKDTGRVLKYDPT-TKQTTVLL----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 212 ~~~~e~~~~~~~~~~~~~g~l~~~d~~-t~~~~~~~----~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
.+.+..|+.+ ++++.... .....+++++++||++.+|++....+.+..|+++.. .+.
T Consensus 161 -----------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~ 222 (347)
T 3hfq_A 161 -----------------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGA 222 (347)
T ss_dssp -----------------TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTE
T ss_pred -----------------CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCc
Confidence 2567777766 55554321 222357789999999999998888888888887731 222
Q ss_pred eeee---ecCC------CCCCceEECCCCC-EEEEEccC
Q 015463 287 LEAF---AILP------GYPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 287 ~~~~---~~l~------g~pd~i~~d~~G~-lwv~~~~~ 315 (406)
.+.. ...+ ..|..++++++|+ +|++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~ 261 (347)
T 3hfq_A 223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY 261 (347)
T ss_dssp EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT
T ss_pred eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC
Confidence 2222 1122 1255689999998 77776543
No 63
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=1.9e-11 Score=114.75 Aligned_cols=187 Identities=12% Similarity=0.118 Sum_probs=127.0
Q ss_pred cCcceEEEcCCCCeeEEEecC-CEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 69 QGPESMAFDPLGRGPYTGVAD-GRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~-g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
..|.++++|++|+ +|++.+. ++|.+++.+ .++.+...... ...+.|.++++++ +|++|
T Consensus 86 ~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g~~~~~~~~~~~------------------~~~~~~~~i~~d~-dG~l~ 145 (305)
T 3dr2_A 86 AFTNGNAVDAQQR-LVHCEHGRRAITRSDADGQAHLLVGRYAG------------------KRLNSPNDLIVAR-DGAIW 145 (305)
T ss_dssp SCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEEEEECEETT------------------EECSCCCCEEECT-TSCEE
T ss_pred CccceeeECCCCC-EEEEECCCCEEEEECCCCCEEEEEeccCC------------------CccCCCCCEEECC-CCCEE
Confidence 4689999999999 7877654 789999877 55444322110 1135688999999 89999
Q ss_pred EEeC------------------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccc
Q 015463 147 IADA------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 147 Vad~------------------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~ 207 (406)
++|. ..+|+++|+++++++.+. .+..++++++++||+ ||++++...
T Consensus 146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------~~~~p~gl~~spdg~~lyv~~~~~~--------- 210 (305)
T 3dr2_A 146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------DLDHPNGLAFSPDEQTLYVSQTPEQ--------- 210 (305)
T ss_dssp EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------EESSEEEEEECTTSSEEEEEECCC----------
T ss_pred EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------cCCCCcceEEcCCCCEEEEEecCCc---------
Confidence 9752 247999999888766543 245689999999996 999985310
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeE---EEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCC
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT---TVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK 283 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~---~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~ 283 (406)
....++|++|+.+++.+ +.+. .....|.|++++++++ +|++. .++|++|+.+|..
T Consensus 211 ------------------~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~ 269 (305)
T 3dr2_A 211 ------------------GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQL 269 (305)
T ss_dssp --------------------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCE
T ss_pred ------------------CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCE
Confidence 01125688888765432 1222 1234578999999997 77765 4679999875431
Q ss_pred CcceeeeecCCCCCCceEECCCCC-EEEEEccC
Q 015463 284 AGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 284 ~~~~~~~~~l~g~pd~i~~d~~G~-lwv~~~~~ 315 (406)
. ..+ ..+..|.+++++++|+ ||+++..+
T Consensus 270 ~---~~~-~~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 270 L---GHI-PTPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp E---EEE-ECSSCCCEEEECTTSCEEEEEETTE
T ss_pred E---EEE-ECCCceeEEEEeCCCCEEEEEcCCe
Confidence 1 112 2344588899987764 99998643
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.39 E-value=1e-10 Score=110.71 Aligned_cols=189 Identities=14% Similarity=0.145 Sum_probs=132.7
Q ss_pred cceEEEcCCCCeeEEEe--cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGV--ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~--~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
|.+++++++|+.+|++. .++.|+.++....+...... .....|.++++++++..||++
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--------------------NTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--------------------CCCTTCCCCEEETTTTEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec--------------------CCCCccceEEECCCCCEEEEE
Confidence 78899999999888876 36889999987222221111 012347789999844568998
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+..+.|+.+|..+++...........+...+.+++++++|+ +|+++..
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------------------------- 251 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------------------------------- 251 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-------------------------------
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-------------------------------
Confidence 87778999999988754332221112334677899999986 7777642
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 307 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~ 307 (406)
.+.|+.||.++++...... ...+.++++++|++.+|++....+.|..++... ++........+.|.+++++++|+
T Consensus 252 -~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 252 -AAEVLVVDTRNGNILAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp -SSEEEEEETTTCCEEEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEECCSEEEEEEECTTSC
T ss_pred -CCEEEEEECCCCcEEEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEecCCCCCeEEEcCCCC
Confidence 3679999998887654333 234678999999999999988788999998653 22211223445688899999998
Q ss_pred -EEEEEccC
Q 015463 308 -FWVAIHCR 315 (406)
Q Consensus 308 -lwv~~~~~ 315 (406)
+|++...+
T Consensus 327 ~l~v~~~~~ 335 (353)
T 3vgz_A 327 TLYVSVKQK 335 (353)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEccc
Confidence 89988654
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=1.9e-11 Score=115.50 Aligned_cols=183 Identities=14% Similarity=0.207 Sum_probs=125.4
Q ss_pred cCcceEEEcCCCCeeEEEecC-----CEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 69 QGPESMAFDPLGRGPYTGVAD-----GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~-----g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..|.+++++++|+ +|+++.. ++|++++.+ ..+.+.... .....|.++++++
T Consensus 87 ~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--------------------~~~~~~~~i~~d~- 144 (333)
T 2dg1_A 87 ANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIEDL--------------------STAYCIDDMVFDS- 144 (333)
T ss_dssp SSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECSS--------------------SSCCCEEEEEECT-
T ss_pred CCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEccC--------------------ccCCcccceEECC-
Confidence 5689999999998 7776654 489999876 333221100 0134688999999
Q ss_pred CCcEEEEeCC-------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccc
Q 015463 142 TGDLYIADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQL 213 (406)
Q Consensus 142 ~g~L~Vad~~-------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~ 213 (406)
+|++|+++.. .+|+++++++++++.+... ...+++++++++|+ +|+++..
T Consensus 145 ~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~----------------- 202 (333)
T 2dg1_A 145 KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-----ISVANGIALSTDEKVLWVTETT----------------- 202 (333)
T ss_dssp TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-----ESSEEEEEECTTSSEEEEEEGG-----------------
T ss_pred CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-----CCcccceEECCCCCEEEEEeCC-----------------
Confidence 8999999874 4799999988776654321 33578999999996 9998742
Q ss_pred cccCCCCCCCcccCCCCeEEEEeCCC-C-eEEEe-------cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCC
Q 015463 214 CSSLNDPSPIKITKDTGRVLKYDPTT-K-QTTVL-------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA 284 (406)
Q Consensus 214 ~~e~~~~~~~~~~~~~g~l~~~d~~t-~-~~~~~-------~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~ 284 (406)
.++|++||.++ + ....+ ..+...+.++++++|++ +|++....++|.+++.++.
T Consensus 203 ---------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~-- 264 (333)
T 2dg1_A 203 ---------------ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY-- 264 (333)
T ss_dssp ---------------GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC--
T ss_pred ---------------CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC--
Confidence 25788888753 2 23211 11224678999999986 7787766689999986432
Q ss_pred cceeeeecCC----C---CCCceEECCCC-CEEEEEccC
Q 015463 285 GNLEAFAILP----G---YPDNVRTNEKG-EFWVAIHCR 315 (406)
Q Consensus 285 ~~~~~~~~l~----g---~pd~i~~d~~G-~lwv~~~~~ 315 (406)
....+. .+ | .|.+++++++| .||+++..+
T Consensus 265 -~~~~~~-~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 265 -PIGQIL-IPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp -EEEEEE-CTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred -EEEEEE-cCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 122222 22 2 58899998886 699998764
No 66
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.38 E-value=3.5e-11 Score=118.92 Aligned_cols=153 Identities=11% Similarity=0.113 Sum_probs=108.8
Q ss_pred CCcceEEEEeCC--CCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccc
Q 015463 130 CGRPLGLRFDKK--TGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 130 ~~~p~gi~~d~~--~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~ 207 (406)
..+|.+|++|++ +|+|||+|..+.|.+++++++.++.+.. .+..|++++++++|+||+++....
T Consensus 138 ~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~dG~lyVad~~~~--------- 203 (433)
T 4hw6_A 138 FDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTLNGDMVVVDDQSS--------- 203 (433)
T ss_dssp CSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECTTCCEEEEECCSC---------
T ss_pred cCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECCCCCEEEEcCCCC---------
Confidence 467999999972 5999999987789999998888776543 356799999999999999996410
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeE-EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
....+++.+++..+.. ......+..|+++++++++..+||++...++|++++.++... .
T Consensus 204 -------------------~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~-~ 263 (433)
T 4hw6_A 204 -------------------DTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL-T 263 (433)
T ss_dssp -------------------TTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE-E
T ss_pred -------------------cccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE-E
Confidence 0012366676654322 112235778999999996667999999889999998752111 0
Q ss_pred eeeeec-CCCCCCceEECCCCC-EEEEEccCC
Q 015463 287 LEAFAI-LPGYPDNVRTNEKGE-FWVAIHCRR 316 (406)
Q Consensus 287 ~~~~~~-l~g~pd~i~~d~~G~-lwv~~~~~~ 316 (406)
..++.. ..+.+.++++|++|+ ||++....+
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 122221 223455799999998 999986543
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=2.7e-11 Score=113.24 Aligned_cols=184 Identities=16% Similarity=0.161 Sum_probs=125.8
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
..|.+++++++|+ +|+++ +++|++++.+ .++.+...... ....+|.++++|+ +|++|
T Consensus 54 ~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~------------------~~~~~~~di~~d~-dG~l~ 112 (297)
T 3g4e_A 54 APVSSVALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDND------------------KKNNRFNDGKVDP-AGRYF 112 (297)
T ss_dssp SCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTT------------------CSSEEEEEEEECT-TSCEE
T ss_pred CceEEEEECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCC------------------CCCCCCCCEEECC-CCCEE
Confidence 4688999999999 88887 5689999976 44444332110 1135688999999 89999
Q ss_pred EEeCC------------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccc
Q 015463 147 IADAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQL 213 (406)
Q Consensus 147 Vad~~------------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~ 213 (406)
+++.. .+|+++++++ +...+.. .+..+|++++++||+ +|++++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~-----~~~~pngi~~spdg~~lyv~~~~----------------- 169 (297)
T 3g4e_A 113 AGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD-----QVDISNGLDWSLDHKIFYYIDSL----------------- 169 (297)
T ss_dssp EEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE-----EESBEEEEEECTTSCEEEEEEGG-----------------
T ss_pred EecCCcccccccccCCCcEEEEEECCC-CEEEEee-----ccccccceEEcCCCCEEEEecCC-----------------
Confidence 99842 3699999874 3443322 235689999999995 8998853
Q ss_pred cccCCCCCCCcccCCCCeEEEEeC--CCCeEE---Eec---ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCc
Q 015463 214 CSSLNDPSPIKITKDTGRVLKYDP--TTKQTT---VLL---RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAG 285 (406)
Q Consensus 214 ~~e~~~~~~~~~~~~~g~l~~~d~--~t~~~~---~~~---~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~ 285 (406)
.++|++|+. +++... .+. .....|.|++++++++ +|++....++|.+|+.+. +
T Consensus 170 ---------------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~t---G 230 (297)
T 3g4e_A 170 ---------------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVT---G 230 (297)
T ss_dssp ---------------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTT---C
T ss_pred ---------------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCC---c
Confidence 256887764 566542 222 2234688999999984 888887778999998652 2
Q ss_pred ceeeeecCC-CCCCceEEC-CCC-CEEEEEccC
Q 015463 286 NLEAFAILP-GYPDNVRTN-EKG-EFWVAIHCR 315 (406)
Q Consensus 286 ~~~~~~~l~-g~pd~i~~d-~~G-~lwv~~~~~ 315 (406)
+......++ ..|.++++. +++ .|||++...
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 222222343 357788886 565 499998754
No 68
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.37 E-value=7.7e-11 Score=113.30 Aligned_cols=172 Identities=12% Similarity=0.176 Sum_probs=112.2
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-cee-EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC--
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-- 141 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-- 141 (406)
.++..|.+|+++++|+.+|+....|+|++++.+ ... .+.... . ......+.++||+++++
T Consensus 15 ~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~----~------------v~~~g~~g~~gia~~pdf~ 78 (353)
T 2g8s_A 15 DKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVP----D------------VWAHGQGGLLDVVLAPDFA 78 (353)
T ss_dssp EEESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCC----C------------CCCSTTCSEEEEEECTTHH
T ss_pred CCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCc----c------------cccCCCCCceeEEECCCCC
Confidence 368899999999999845666678999999866 221 121110 0 01112356899999984
Q ss_pred -CCcEEEEeCC--------CcEEEEeCCCC--e---EEEcccccCC--cccccccceEEcCCCCEEEEeCCCchhhhccc
Q 015463 142 -TGDLYIADAY--------FGLMKVGPEGG--L---ATSLATEAEG--VPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 142 -~g~L~Vad~~--------~gl~~~d~~~~--~---~~~l~~~~~~--~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~ 205 (406)
++.|||++.. ..|.+++.+.+ . .+.+...... .....+++|++++||.||++....... ..
T Consensus 79 ~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~--~~- 155 (353)
T 2g8s_A 79 QSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQR--PT- 155 (353)
T ss_dssp HHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCG--GG-
T ss_pred CCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCC--Cc-
Confidence 6899999753 35888876533 2 2223222221 234568899999999999997432110 00
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCC-------------eEEEecccCCCcceEEEecCCCEEEEEeCCCC
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK-------------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG 272 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~-------------~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~ 272 (406)
.++. ....|+|+|+++++. ..+.+..++..|.|++++++...||+++....
T Consensus 156 -----~q~~-----------~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 156 -----AQDL-----------DKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp -----GGCT-----------TSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred -----cCCC-----------CCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCC
Confidence 0110 233588999999854 34567788899999999996667999987643
No 69
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=1e-10 Score=109.95 Aligned_cols=216 Identities=13% Similarity=0.078 Sum_probs=132.3
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 72 ESMAFDPLGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
.+++++++|+ +|+++.+ |++++.. . ...+... ........+. +++||+++
T Consensus 63 ~~~~~~~~g~-l~v~t~~--l~~~d~~g~~~~~~~~~-----------------------~~~~~~~~~~--~~~l~v~t 114 (330)
T 3hxj_A 63 CRPSIGKDGT-IYFGSDK--VYAINPDGTEKWRFDTK-----------------------KAIVSDFTIF--EDILYVTS 114 (330)
T ss_dssp ECCEETTTTE-ECCSSCE--EEEECCCGGGGGGSCC----------------------------CCEEEE--TTEEEEEC
T ss_pred cceEEecCCc-EEEecCc--EEEECCCCcEEEEEECC-----------------------CCcccCceEE--CCEEEEEe
Confidence 4667777777 8888765 8888754 1 1011000 0001122333 68999998
Q ss_pred CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCC
Q 015463 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDT 229 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 229 (406)
..++|+++|++ ++....... . ......++++++|++|+++..
T Consensus 115 ~~~~l~~~d~~-g~~~~~~~~-~---~~~~~~~~~~~~g~l~vgt~~--------------------------------- 156 (330)
T 3hxj_A 115 MDGHLYAINTD-GTEKWRFKT-K---KAIYATPIVSEDGTIYVGSND--------------------------------- 156 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEEC-S---SCCCSCCEECTTSCEEEECTT---------------------------------
T ss_pred cCCEEEEEcCC-CCEEEEEcC-C---CceeeeeEEcCCCEEEEEcCC---------------------------------
Confidence 87899999998 443221111 1 123566788989999998743
Q ss_pred CeEEEEeCCCCeEE-EecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCCE
Q 015463 230 GRVLKYDPTTKQTT-VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEF 308 (406)
Q Consensus 230 g~l~~~d~~t~~~~-~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~l 308 (406)
++|++||++ ++.. .+.........+++++++. +|++. +.|++++..|. ..-.+.........++.|++|++
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~~g~---~~~~~~~~~~~~~~~~~~~~g~l 228 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINPDGT---EKWNFYAGYWTVTRPAISEDGTI 228 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECTTSC---EEEEECCSSCCCSCCEECTTSCE
T ss_pred CEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECCCCc---EEEEEccCCcceeceEECCCCeE
Confidence 679999998 5443 3322222344566666665 66654 78998883321 11111111233567888999999
Q ss_pred EEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCeeeceeEEE-EeC
Q 015463 309 WVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVE-EKD 387 (406)
Q Consensus 309 wv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~~~~~s~~~-~~~ 387 (406)
|+++..+ .+++++++|+.+..+....+. .+.+. ..+
T Consensus 229 ~v~t~~~---------------------------------------gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~ 265 (330)
T 3hxj_A 229 YVTSLDG---------------------------------------HLYAINPDGTEKWRFKTGKRI----ESSPVIGNT 265 (330)
T ss_dssp EEEETTT---------------------------------------EEEEECTTSCEEEEEECSSCC----CSCCEECTT
T ss_pred EEEcCCC---------------------------------------eEEEECCCCCEeEEeeCCCCc----cccceEcCC
Confidence 9998643 277889999998887654332 22233 347
Q ss_pred CEEEEecCCCCeEEEEeC
Q 015463 388 GKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 388 g~Ly~Gs~~~~~i~~~~~ 405 (406)
|+||+|+. ..+|.+++.
T Consensus 266 g~l~v~t~-~ggl~~~d~ 282 (330)
T 3hxj_A 266 DTIYFGSY-DGHLYAINP 282 (330)
T ss_dssp SCEEEECT-TCEEEEECT
T ss_pred CeEEEecC-CCCEEEECC
Confidence 89999996 457888873
No 70
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.36 E-value=2e-11 Score=127.76 Aligned_cols=198 Identities=12% Similarity=0.154 Sum_probs=133.6
Q ss_pred CCcceEEEEeCCCCcEEEEeCC-CcEEEEeCCC----CeEEEcccccCCcccccccceEEc-CCCCEEEEeCCCchhhhc
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY-FGLMKVGPEG----GLATSLATEAEGVPLRFTNDLDID-DEGNVYFTDSSTNYQRRQ 203 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~----~~~~~l~~~~~~~~~~~~~~l~~d-~dG~ly~t~~~~~~~~~~ 203 (406)
..+|.+|++++.++.||++|.. +.|+++++++ .....+. ...+..|.+|++| ..|+||+++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i----~~~~~~P~glavD~~~g~LY~tD~~------- 473 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV------- 473 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC----CSCC--CCCEECCCSSSBCEECCTT-------
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE----eCCCCCcceEEEEeeCCcEEEEecc-------
Confidence 4678999999867899999876 5799999876 2211111 1224568899999 47799999854
Q ss_pred cccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeC
Q 015463 204 MQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIG 281 (406)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g 281 (406)
.++|.+++++++..+++. .++..|++|++++++..|||++... ++|++++++|
T Consensus 474 -------------------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 474 -------------------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp -------------------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred -------------------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 367999999877666654 4578899999999888999998765 7899998876
Q ss_pred CCCcceeeee-cCCCCCCceEECCC-CCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEE
Q 015463 282 EKAGNLEAFA-ILPGYPDNVRTNEK-GEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKY 359 (406)
Q Consensus 282 ~~~~~~~~~~-~l~g~pd~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~ 359 (406)
.. .+++. .....|++|++|++ ++||++..... .|.++
T Consensus 529 ~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~--------------------------------------~I~~~ 567 (699)
T 1n7d_A 529 VD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH--------------------------------------SISSI 567 (699)
T ss_dssp CC---CCEESCSSCSSCCCEEECTTTCCEEEEETTTT--------------------------------------EEEEE
T ss_pred CC---eeEEEeCCCCCccEEEEeccCCEEEEEecCCC--------------------------------------eEEEE
Confidence 32 12222 22356999999965 67999885431 25556
Q ss_pred CCCCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 360 SPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 360 d~~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.+|...+.+....+. .....++....++||+.....+.|.+++.
T Consensus 568 d~dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 568 DVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp CSSSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ccCCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 6666544444321111 11223333455688888877788887763
No 71
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=3.6e-11 Score=118.78 Aligned_cols=151 Identities=15% Similarity=0.182 Sum_probs=110.1
Q ss_pred CCcceEEEEeC-CCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccc
Q 015463 130 CGRPLGLRFDK-KTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 130 ~~~p~gi~~d~-~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~ 207 (406)
...|.+|++|+ ++++||+++..+.|.++|++++.++.+.. ....|++|+++++|+ ||+++...+
T Consensus 136 ~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~~--------- 201 (430)
T 3tc9_A 136 FGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQNN--------- 201 (430)
T ss_dssp CSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCSC---------
T ss_pred CCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCCC---------
Confidence 46799999996 36999999987789999999887776543 345799999999998 999996421
Q ss_pred cccccccccCCCCCCCcccCCCCeEEEEeCCCCeE-EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 208 NIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
.....++.++++.+.. ......+..|+++++++++..+|+++...++|++++.++...
T Consensus 202 -------------------~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-- 260 (430)
T 3tc9_A 202 -------------------NDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-- 260 (430)
T ss_dssp -------------------TTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--
T ss_pred -------------------cccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--
Confidence 1112467777654322 112234678999999996667999999999999999764321
Q ss_pred eeeee-cCCCCCCceEECCCCC-EEEEEccC
Q 015463 287 LEAFA-ILPGYPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 287 ~~~~~-~l~g~pd~i~~d~~G~-lwv~~~~~ 315 (406)
...+. ...+.|.++++|++|+ +|++....
T Consensus 261 ~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 261 TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred EEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 12222 1224699999999999 99997654
No 72
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=9.2e-11 Score=112.03 Aligned_cols=195 Identities=15% Similarity=0.136 Sum_probs=130.8
Q ss_pred CcccCcceEEEcCCCCeeEEEec-----CCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEE
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVA-----DGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~-----~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 137 (406)
+.+..|.++++|++|+++++++. .++|++++.+ + ...+.... . .......|.+++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~-~----------------~~~~~~~~~~v~ 126 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPP-P----------------ITLSNSFVNDLA 126 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCT-T----------------TSCTTCCCCEEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECCh-h----------------hcccccccceEE
Confidence 45789999999999985555554 5799999976 3 22332111 0 001134578999
Q ss_pred EeCCCCcEEEEeC---C-CcEEEEeCCCCeEEEcccc------------cCCccc-------------ccccceEEcCCC
Q 015463 138 FDKKTGDLYIADA---Y-FGLMKVGPEGGLATSLATE------------AEGVPL-------------RFTNDLDIDDEG 188 (406)
Q Consensus 138 ~d~~~g~L~Vad~---~-~gl~~~d~~~~~~~~l~~~------------~~~~~~-------------~~~~~l~~d~dG 188 (406)
++++++.+||++. . .+|+++|+++++...+... .++..+ ..+++|++++||
T Consensus 127 vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg 206 (343)
T 2qe8_A 127 VDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN 206 (343)
T ss_dssp EETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS
T ss_pred EecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC
Confidence 9975689999997 3 6899999987765543211 011111 247899999999
Q ss_pred -CEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCC---Ce---------EEEecccCCCcceE
Q 015463 189 -NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTT---KQ---------TTVLLRNLQFPNGL 255 (406)
Q Consensus 189 -~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t---~~---------~~~~~~~~~~~ngi 255 (406)
.+|+++.. ..+|++++... +. +..+ .....|+|+
T Consensus 207 ~~ly~~~~~--------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgi 253 (343)
T 2qe8_A 207 EWLYLSPMH--------------------------------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGI 253 (343)
T ss_dssp CEEEEEESS--------------------------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCE
T ss_pred CEEEEEeCC--------------------------------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceE
Confidence 59998754 14688887421 10 1111 123478999
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEe-eCCCCcceeeeecC--CCCCCceEECCCCCEEEEEccC
Q 015463 256 SLSKDKSFFVFCEGSVGRLHKYWL-IGEKAGNLEAFAIL--PGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 256 ~l~~d~~~l~v~~t~~~~i~~~~~-~g~~~~~~~~~~~l--~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
++++|+ .+|+++...++|.+++. .| +...+... ...|++++++++|++||+....
T Consensus 254 a~d~~G-~l~va~~~~~~V~~~d~~~G----~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 254 SIDKDH-NIYVGDLAHSAIGVITSADR----AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EECTTC-CEEEEEGGGTEEEEEETTTT----EEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred EECCCC-CEEEEccCCCeEEEEECCCC----CEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 999987 58999988899999997 33 33333332 2469999999999999998643
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.35 E-value=1e-09 Score=103.04 Aligned_cols=182 Identities=9% Similarity=-0.008 Sum_probs=117.9
Q ss_pred ccCcceEEEcCCCCeeEEEec-CCEEEEEeCC--ce-eEEEeecCCCccccCCCCCcccccccCCcCCcceE-EEEeCCC
Q 015463 68 IQGPESMAFDPLGRGPYTGVA-DGRILFWDGL--KW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLG-LRFDKKT 142 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g-i~~d~~~ 142 (406)
...| +++++++|+.+|+... ++.|+.++.. .. ..... ....|.. +++++ +
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------------~~~~~~~~~~~s~-d 94 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-----------------------EGQSSMADVDITP-D 94 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-----------------------ECSSCCCCEEECT-T
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-----------------------cCCCCccceEECC-C
Confidence 4556 9999999987777655 7899999976 32 11111 1234666 89999 5
Q ss_pred Cc-EEEEeCCC----cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhcccccccccccccc
Q 015463 143 GD-LYIADAYF----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 143 g~-L~Vad~~~----gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
|+ |+ +.... .|..+|.++++....... ...++++++++||+ +|+++..
T Consensus 95 g~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~-------------------- 148 (331)
T 3u4y_A 95 DQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRS-------------------- 148 (331)
T ss_dssp SSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEET--------------------
T ss_pred CCEEE-EecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecC--------------------
Confidence 65 56 44443 699999988865432211 12468999999995 8888642
Q ss_pred CCCCCCCcccCCCCe-EEEEeCCC-CeE----EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc-eee
Q 015463 217 LNDPSPIKITKDTGR-VLKYDPTT-KQT----TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN-LEA 289 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~-l~~~d~~t-~~~----~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~-~~~ 289 (406)
.+. +..|+.+. +.. .........+.++++++|++.+|++....+.|..+++...+... ...
T Consensus 149 ------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 149 ------------SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp ------------TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred ------------CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 123 43333221 222 11223345678999999999999998878899999976432200 111
Q ss_pred eecCCCCCCceEECCCCC-EEEEEc
Q 015463 290 FAILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 290 ~~~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
+ .....|.+++++++|+ +|++..
T Consensus 217 ~-~~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 217 V-GTNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp E-ECSSCCCCEEECTTSSEEEEECS
T ss_pred c-cCCCCCceEEECCCCCEEEEEEc
Confidence 1 2345688999999999 777754
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.28 E-value=3.2e-09 Score=98.35 Aligned_cols=217 Identities=12% Similarity=0.061 Sum_probs=143.1
Q ss_pred CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEE
Q 015463 79 LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKV 157 (406)
Q Consensus 79 ~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~ 157 (406)
.|++++++..+++|+.++.+ .-......... ...+.++++.+ +|+++++ ..++++.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~--------------------~~~~~~~~~~p-dG~ilvs-~~~~V~~~ 61 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK--------------------GWECNSVAATK-AGEILFS-YSKGAKMI 61 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT--------------------TCCCCEEEECT-TSCEEEE-CBSEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc--------------------cCCCcCeEECC-CCCEEEe-CCCCEEEE
Confidence 35668888999999999985 22222111100 12467888998 8999994 46789999
Q ss_pred eCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeC
Q 015463 158 GPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDP 237 (406)
Q Consensus 158 d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~ 237 (406)
|+++..+..+... . ...++++.+.+||+++++++. ..++++.+|+
T Consensus 62 d~~G~~~W~~~~~-~---~~~~~~~~~~~dG~~lv~~~~-------------------------------~~~~v~~vd~ 106 (276)
T 3no2_A 62 TRDGRELWNIAAP-A---GCEMQTARILPDGNALVAWCG-------------------------------HPSTILEVNM 106 (276)
T ss_dssp CTTSCEEEEEECC-T---TCEEEEEEECTTSCEEEEEES-------------------------------TTEEEEEECT
T ss_pred CCCCCEEEEEcCC-C---CccccccEECCCCCEEEEecC-------------------------------CCCEEEEEeC
Confidence 9965555544321 1 123556788899999999742 1367899998
Q ss_pred CCCeEEEec--cc----CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCceEECCCCCEEE
Q 015463 238 TTKQTTVLL--RN----LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWV 310 (406)
Q Consensus 238 ~t~~~~~~~--~~----~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i~~d~~G~lwv 310 (406)
+.+.+..+. .. ...+.+++..+|++.+ ++....++|..++.+|. .++. ..++.|.++...++|+++|
T Consensus 107 ~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l-v~~~~~~~v~~~d~~G~-----~~w~~~~~~~~~~~~~~~~g~~~v 180 (276)
T 3no2_A 107 KGEVLSKTEFETGIERPHAQFRQINKNKKGNYL-VPLFATSEVREIAPNGQ-----LLNSVKLSGTPFSSAFLDNGDCLV 180 (276)
T ss_dssp TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE-EEETTTTEEEEECTTSC-----EEEEEECSSCCCEEEECTTSCEEE
T ss_pred CCCEEEEEeccCCCCcccccccCceECCCCCEE-EEecCCCEEEEECCCCC-----EEEEEECCCCccceeEcCCCCEEE
Confidence 655444432 11 2345678888999855 66777889999987642 1222 3345678888889999998
Q ss_pred EEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCC-CCEEEEEECCC--CCeeeceeEEE-Ee
Q 015463 311 AIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQVLEDSK--GKVVKAISEVE-EK 386 (406)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~--g~~~~~~s~~~-~~ 386 (406)
+.... ..++++|++ |++++.+...+ +..+..++++. ..
T Consensus 181 ~~~~~--------------------------------------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 181 ACGDA--------------------------------------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp ECBTT--------------------------------------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred EeCCC--------------------------------------CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 86543 137889998 99999986432 22233344443 46
Q ss_pred CCEEEEecCC
Q 015463 387 DGKLWMGSVL 396 (406)
Q Consensus 387 ~g~Ly~Gs~~ 396 (406)
+|++|++++.
T Consensus 223 ~G~i~v~~~~ 232 (276)
T 3no2_A 223 NGGLYICNWQ 232 (276)
T ss_dssp TSCEEEEEEC
T ss_pred CCCEEEEecc
Confidence 8899999863
No 75
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=4.2e-10 Score=111.88 Aligned_cols=160 Identities=13% Similarity=0.153 Sum_probs=112.6
Q ss_pred CCcceEEEEeC-CCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEE-------cCCCC-EEEEeCCCch
Q 015463 130 CGRPLGLRFDK-KTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDI-------DDEGN-VYFTDSSTNY 199 (406)
Q Consensus 130 ~~~p~gi~~d~-~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~-------d~dG~-ly~t~~~~~~ 199 (406)
...|.+|++|+ ++++|||++.. ++|.++|++++.++.+..... ..+..|++|++ +++|+ ||+++.....
T Consensus 138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 45699999997 36899999875 679999999998887754322 24667999999 99997 9999864210
Q ss_pred hhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCC-CeEE-----EecccCCCcceEEEecCCCEEEEEeCCCCe
Q 015463 200 QRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTT-KQTT-----VLLRNLQFPNGLSLSKDKSFFVFCEGSVGR 273 (406)
Q Consensus 200 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t-~~~~-----~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~ 273 (406)
. ...-.++.++++. +++. ........|++++++++++.||+++...++
T Consensus 217 ~--------------------------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~ 270 (496)
T 3kya_A 217 G--------------------------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQ 270 (496)
T ss_dssp G--------------------------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTE
T ss_pred c--------------------------ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCE
Confidence 0 0012477776554 2331 122245689999999988899999998899
Q ss_pred EEEEEee-------CCCC------c----ceeeeec-CCCCCCceEECCCCC-EEEEEccCC
Q 015463 274 LHKYWLI-------GEKA------G----NLEAFAI-LPGYPDNVRTNEKGE-FWVAIHCRR 316 (406)
Q Consensus 274 i~~~~~~-------g~~~------~----~~~~~~~-l~g~pd~i~~d~~G~-lwv~~~~~~ 316 (406)
|++++++ +... . ..+++.. ..+.|.+++++++|+ +||+....+
T Consensus 271 V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h 332 (496)
T 3kya_A 271 VFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNH 332 (496)
T ss_dssp EEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred EEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCC
Confidence 9999987 3322 0 1122321 224578999999999 899986553
No 76
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=4.3e-09 Score=97.42 Aligned_cols=223 Identities=13% Similarity=0.090 Sum_probs=142.2
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
..+.+++++++|+ +++ +.+++|+.++++ + +-++.. .. ...+.+..+.+ +|+++
T Consensus 37 ~~~~~~~~~pdG~-ilv-s~~~~V~~~d~~G~~~W~~~~--~~--------------------~~~~~~~~~~~-dG~~l 91 (276)
T 3no2_A 37 WECNSVAATKAGE-ILF-SYSKGAKMITRDGRELWNIAA--PA--------------------GCEMQTARILP-DGNAL 91 (276)
T ss_dssp CCCCEEEECTTSC-EEE-ECBSEEEEECTTSCEEEEEEC--CT--------------------TCEEEEEEECT-TSCEE
T ss_pred CCCcCeEECCCCC-EEE-eCCCCEEEECCCCCEEEEEcC--CC--------------------CccccccEECC-CCCEE
Confidence 3588999999999 555 567889999986 2 112211 00 01245667777 89999
Q ss_pred EEeCC--CcEEEEeCCCCeEEEcccccC-CcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 147 IADAY--FGLMKVGPEGGLATSLATEAE-GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 147 Vad~~--~gl~~~d~~~~~~~~l~~~~~-~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
|++.. ..++.+++++..+..+..... ..+...+..++++++|++++++..
T Consensus 92 v~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~--------------------------- 144 (276)
T 3no2_A 92 VAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA--------------------------- 144 (276)
T ss_dssp EEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT---------------------------
T ss_pred EEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC---------------------------
Confidence 98765 468899997766555432111 123345778889999999998753
Q ss_pred cccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee-CCCCcceeeee--cCCC----C
Q 015463 224 KITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI-GEKAGNLEAFA--ILPG----Y 296 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~-g~~~~~~~~~~--~l~g----~ 296 (406)
.++|+.||++.+.+..+.. ...+.+++..++++.+ ++....++|..++.+ |.. .-.+. ++++ .
T Consensus 145 -----~~~v~~~d~~G~~~w~~~~-~~~~~~~~~~~~g~~~-v~~~~~~~v~~~d~~tG~~---~w~~~~~~~~~~~l~~ 214 (276)
T 3no2_A 145 -----TSEVREIAPNGQLLNSVKL-SGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRI---VRRVNANDIEGVQLFF 214 (276)
T ss_dssp -----TTEEEEECTTSCEEEEEEC-SSCCCEEEECTTSCEE-EECBTTSEEEEECTTTCCE---EEEEEGGGSBSCCCSE
T ss_pred -----CCEEEEECCCCCEEEEEEC-CCCccceeEcCCCCEE-EEeCCCCeEEEEeCcCCcE---EEEecCCCCCCccccc
Confidence 4789999998444444332 2456778888888754 555666789998866 321 01111 1222 2
Q ss_pred CCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEECCCCCe
Q 015463 297 PDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLEDSKGKV 376 (406)
Q Consensus 297 pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~g~~ 376 (406)
|.++...++|+++|+...++..... ......+++++++|++++.|.+...
T Consensus 215 ~~~~~~~~~G~i~v~~~~g~~~~~~----------------------------~~~~~~~~~~~~~g~~~W~~~~~~~-- 264 (276)
T 3no2_A 215 VAQLFPLQNGGLYICNWQGHDREAG----------------------------KGKHPQLVEIDSEGKVVWQLNDKVK-- 264 (276)
T ss_dssp EEEEEECTTSCEEEEEECTTCTTGG----------------------------GSCCCSEEEECTTSBEEEEECCTTT--
T ss_pred cccceEcCCCCEEEEeccCcccccc----------------------------ccCCceEEEECCCCCEEEEecCccc--
Confidence 6788889999999998644211000 0012238899999999999975433
Q ss_pred eeceeEE
Q 015463 377 VKAISEV 383 (406)
Q Consensus 377 ~~~~s~~ 383 (406)
+..+|.+
T Consensus 265 ~~~~~~~ 271 (276)
T 3no2_A 265 FGMISTI 271 (276)
T ss_dssp SCCCCEE
T ss_pred ccceeee
Confidence 3455554
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.25 E-value=2e-08 Score=96.50 Aligned_cols=184 Identities=13% Similarity=0.171 Sum_probs=127.6
Q ss_pred cCcceEEEcCCCCeeE-EEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 69 QGPESMAFDPLGRGPY-TGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly-~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..|.+++++++|+.+| ++..++.|..|+....+...... ....+.++++++++..|++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---------------------~~~~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---------------------AGSSPQGVAVSPDGKQVYV 90 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---------------------CSSSEEEEEECTTSSEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---------------------CCCCccceEECCCCCEEEE
Confidence 3578999999998665 55688999999976211111110 0235789999994445778
Q ss_pred EeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 148 ADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 148 ad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
+... +.|..+|.++++....... ...+.+++++++|+ +|++...
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~----------------------------- 136 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGKKLYVTNNG----------------------------- 136 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEETT-----------------------------
T ss_pred EECCCCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCCEEEEEeCC-----------------------------
Confidence 8765 6799999998865443221 12467899999996 6677542
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK 305 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~ 305 (406)
.+.|+.+|..+++..........+..+++++|++.++++....+.|..+++... ...........+..++++++
T Consensus 137 ---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~ 210 (391)
T 1l0q_A 137 ---DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---SVIDTVKVEAAPSGIAVNPE 210 (391)
T ss_dssp ---TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECSSEEEEEEECTT
T ss_pred ---CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---eEEEEEecCCCccceEECCC
Confidence 378999999988876655555667899999999999888877789999987532 21111222334667888999
Q ss_pred CC-EEEEEc
Q 015463 306 GE-FWVAIH 313 (406)
Q Consensus 306 G~-lwv~~~ 313 (406)
|+ +|++..
T Consensus 211 g~~l~~~~~ 219 (391)
T 1l0q_A 211 GTKAYVTNV 219 (391)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEec
Confidence 87 666653
No 78
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.25 E-value=7.2e-09 Score=98.22 Aligned_cols=200 Identities=14% Similarity=0.101 Sum_probs=125.7
Q ss_pred ccCcceEEEcCCCCeeEEEe-cCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
...|.+++++++|+.+|++. .++.|..|+.+ ....+.......... ........|.++++++ +|
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p-----------~~~~~~~~~~~~~~sp-dg 152 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGP-----------RPEQDGSHIHYTDLTP-DN 152 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCS-----------STTCSSCCEEEEEECT-TS
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCC-----------CccccCCCceEEEECC-CC
Confidence 45789999999999888877 56888877753 333332211100000 0001134578899999 77
Q ss_pred cEEEEeCCC-cEEEEeCC-CCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCC
Q 015463 144 DLYIADAYF-GLMKVGPE-GGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 144 ~L~Vad~~~-gl~~~d~~-~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++|+++... .|..++.+ ++++...... .......|+++++++||+ +|+++..
T Consensus 153 ~l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~------------------------ 207 (347)
T 3hfq_A 153 RLAVIDLGSDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGEL------------------------ 207 (347)
T ss_dssp CEEEEETTTTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETT------------------------
T ss_pred cEEEEeCCCCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCC------------------------
Confidence 799998764 58788876 5554433211 111123577899999997 8887643
Q ss_pred CCCcccCCCCe--EEEEeCCCCeEEEec--ccC-------CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceee
Q 015463 221 SPIKITKDTGR--VLKYDPTTKQTTVLL--RNL-------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEA 289 (406)
Q Consensus 221 ~~~~~~~~~g~--l~~~d~~t~~~~~~~--~~~-------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~ 289 (406)
.+. ++.++..+++.+... ... ..+.+++++||++.+|++....+.|..|+++.. +..+.
T Consensus 208 --------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~ 277 (347)
T 3hfq_A 208 --------SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTL 277 (347)
T ss_dssp --------TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEE
T ss_pred --------CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEE
Confidence 134 455555456654332 111 236679999999999999877789999988621 22233
Q ss_pred eec--C-CCCCCceEECCCCC-EEEEEcc
Q 015463 290 FAI--L-PGYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 290 ~~~--l-~g~pd~i~~d~~G~-lwv~~~~ 314 (406)
... . ...|.+++++++|+ +|++...
T Consensus 278 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 278 IQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred eEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 322 2 33689999999998 6776643
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.23 E-value=1e-08 Score=96.12 Aligned_cols=190 Identities=15% Similarity=0.226 Sum_probs=119.4
Q ss_pred cCcceEEEcCCCCeeEEEecC-CEEEEEeCC----ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 69 QGPESMAFDPLGRGPYTGVAD-GRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~-g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
..|.+++++++|+.+|++..+ +.|..|+.+ ..+.+.... ..+.|.++++++ +|
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~s~-dg 95 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA---------------------LPGSLTHISTDH-QG 95 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---------------------CSSCCSEEEECT-TS
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc---------------------cCCCCcEEEEcC-CC
Confidence 478999999999988888776 888876643 333222111 123688999999 55
Q ss_pred c-EEEEeCCC-cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCC
Q 015463 144 D-LYIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 144 ~-L~Vad~~~-gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
+ ||++.... .|..++.+.+........... ...+.+++++++|+ +|+++..
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~------------------------ 149 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALK------------------------ 149 (343)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGG------------------------
T ss_pred CEEEEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCC------------------------
Confidence 5 88887644 477787733322111111111 12478899999996 7776522
Q ss_pred CCCcccCCCCeEEEEeCCC-CeEEEe------cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCccee---ee
Q 015463 221 SPIKITKDTGRVLKYDPTT-KQTTVL------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLE---AF 290 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t-~~~~~~------~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~---~~ 290 (406)
.+.|..||..+ ++.... ......+.++++++|++.+|++....+.|..++++.. .+..+ .+
T Consensus 150 --------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~ 220 (343)
T 1ri6_A 150 --------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTL 220 (343)
T ss_dssp --------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEE
T ss_pred --------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeec
Confidence 26788888776 655321 1223467789999999999999877789999988531 12221 12
Q ss_pred ecCC-C-----CCCceEECCCCC-EEEEEccC
Q 015463 291 AILP-G-----YPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 291 ~~l~-g-----~pd~i~~d~~G~-lwv~~~~~ 315 (406)
...+ + .+..++++++|+ +|++....
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~ 252 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTA 252 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTT
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCC
Confidence 2121 1 233588999997 66666433
No 80
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.19 E-value=1.2e-09 Score=103.51 Aligned_cols=181 Identities=16% Similarity=0.167 Sum_probs=120.2
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
.|.+++++++|+ +|+++. .+|++++.+ .++.+..... .....++.++++|+ +|++|+
T Consensus 91 ~v~~i~~~~dg~-l~v~~~-~gl~~~d~~~g~~~~~~~~~~------------------~~~~~~~~~i~~d~-~G~l~v 149 (326)
T 2ghs_A 91 MGSALAKISDSK-QLIASD-DGLFLRDTATGVLTLHAELES------------------DLPGNRSNDGRMHP-SGALWI 149 (326)
T ss_dssp CEEEEEEEETTE-EEEEET-TEEEEEETTTCCEEEEECSST------------------TCTTEEEEEEEECT-TSCEEE
T ss_pred cceEEEEeCCCe-EEEEEC-CCEEEEECCCCcEEEEeeCCC------------------CCCCCCCCCEEECC-CCCEEE
Confidence 578899999998 788774 469999975 4444422110 01134688999999 899999
Q ss_pred EeCC-------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCC
Q 015463 148 ADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 148 ad~~-------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
++.. .+|++++ +++++.+... ...++++++++||+ +|++++.
T Consensus 150 ~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~----------------------- 199 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA--KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK----------------------- 199 (326)
T ss_dssp EEEETTCCTTCEEEEEEE--TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----------------------
T ss_pred EeCCCcCCCCceEEEEEe--CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----------------------
Confidence 9852 4799999 4665544321 23578999999994 8998753
Q ss_pred CCCCcccCCCCeEEEEeCC--CC-eE---EEec---ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeee
Q 015463 220 PSPIKITKDTGRVLKYDPT--TK-QT---TVLL---RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF 290 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~--t~-~~---~~~~---~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~ 290 (406)
.++|++||.+ ++ +. +.+. .....+.++++++++. +|++....++|.+|+.++. ....+
T Consensus 200 ---------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i 266 (326)
T 2ghs_A 200 ---------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARY 266 (326)
T ss_dssp ---------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEE
T ss_pred ---------CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEE
Confidence 2678888864 55 32 2221 1234578999999885 7787766689999986432 11122
Q ss_pred ecCCC-CCCceEEC-CCC-CEEEEEccC
Q 015463 291 AILPG-YPDNVRTN-EKG-EFWVAIHCR 315 (406)
Q Consensus 291 ~~l~g-~pd~i~~d-~~G-~lwv~~~~~ 315 (406)
.++. .|.+++++ +++ .+||++...
T Consensus 267 -~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 267 -EVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -ECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -ECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 2322 36678886 665 499998654
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=4.4e-08 Score=93.32 Aligned_cols=194 Identities=11% Similarity=0.130 Sum_probs=116.7
Q ss_pred cccCcceEEEcCCCCeeEEEecC----CEEE--EEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 67 QIQGPESMAFDPLGRGPYTGVAD----GRIL--FWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~----g~I~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
....|..++++++|+.+|++..+ +.|. .++.+ ..+.+.... .....|..+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~--------------------~~~~~p~~~~~ 107 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK--------------------TMGADPCYLTT 107 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE--------------------CSSSCEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec--------------------cCCCCcEEEEE
Confidence 45789999999999988988774 6774 44543 233332211 11345788888
Q ss_pred eCCCCcEEEEeCC-CcEEEEeCCC-CeEEEcccc--cCC-------cccccccceEEcCCCC-EEEEeCCCchhhhcccc
Q 015463 139 DKKTGDLYIADAY-FGLMKVGPEG-GLATSLATE--AEG-------VPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQK 206 (406)
Q Consensus 139 d~~~g~L~Vad~~-~gl~~~d~~~-~~~~~l~~~--~~~-------~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~ 206 (406)
+ +..||+++.. +.+..++.+. +.+..+... ..+ .....+.++++++||+ +|+++..
T Consensus 108 d--g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---------- 175 (361)
T 3scy_A 108 N--GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG---------- 175 (361)
T ss_dssp C--SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT----------
T ss_pred C--CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC----------
Confidence 3 6679999865 3477777653 222211110 011 0122457799999997 8887743
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEE--eCCCC----e-E-------EEecccCCCcceEEEecCCCEEEEEeCCCC
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKY--DPTTK----Q-T-------TVLLRNLQFPNGLSLSKDKSFFVFCEGSVG 272 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~--d~~t~----~-~-------~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~ 272 (406)
.+.+..| +..++ + + .........+.+++++||++.+|++....+
T Consensus 176 ----------------------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 176 ----------------------TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp ----------------------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred ----------------------CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 2345444 55443 2 2 112233456788999999999999987778
Q ss_pred eEEEEEeeCCCCcceeeeecCC---CCCCceEECCCCC-EEEEEcc
Q 015463 273 RLHKYWLIGEKAGNLEAFAILP---GYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 273 ~i~~~~~~g~~~~~~~~~~~l~---g~pd~i~~d~~G~-lwv~~~~ 314 (406)
.|..|+++.........+...+ ..|..++++++|+ +|++...
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 9999998732111111111111 1245789999998 6666654
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.17 E-value=1.3e-08 Score=95.38 Aligned_cols=183 Identities=10% Similarity=0.048 Sum_probs=116.8
Q ss_pred EcCCCCeeE-EEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEEeCC
Q 015463 76 FDPLGRGPY-TGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIADAY 151 (406)
Q Consensus 76 ~d~~g~~ly-~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Vad~~ 151 (406)
++.+++.+| +...++.|..++.. +....... ....| ++++++ +|+ ||++...
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~----------------------~~~~~-~~~~s~-dg~~l~~~~~~ 60 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL----------------------GYDFV-DTAITS-DCSNVVVTSDF 60 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC----------------------CCCEE-EEEECS-SSCEEEEEEST
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc----------------------cCCcc-eEEEcC-CCCEEEEEeCC
Confidence 334444445 45667899999976 22221111 02335 899999 565 8998874
Q ss_pred -CcEEEEeCCCCeE-EEcccccCCcccccccc-eEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 152 -FGLMKVGPEGGLA-TSLATEAEGVPLRFTND-LDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 152 -~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~-l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
..|+.+|.++++. ...... ...+.. ++++++|+..++... ...
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~-----------------------------~~~ 106 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQE-----GQSSMADVDITPDDQFAVTVTG-----------------------------LNH 106 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEE-----CSSCCCCEEECTTSSEEEECCC-----------------------------SSS
T ss_pred CCeEEEEECCCCceeEEeccc-----CCCCccceEECCCCCEEEEecC-----------------------------CCC
Confidence 6799999988875 222111 123556 899999975554321 101
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCe-EEEEEeeCCCC-cce-eeeecCCCCCCceEECCC
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGR-LHKYWLIGEKA-GNL-EAFAILPGYPDNVRTNEK 305 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~-i~~~~~~g~~~-~~~-~~~~~l~g~pd~i~~d~~ 305 (406)
.+.|..+|.++++..........+++++++||++.+|++....+. |..|+++.... ... .........|.+++++++
T Consensus 107 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 107 PFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD 186 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT
T ss_pred cccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCC
Confidence 127999999988876655555667899999999999998876677 88888763211 011 111122334788999999
Q ss_pred CC-EEEEEccCC
Q 015463 306 GE-FWVAIHCRR 316 (406)
Q Consensus 306 G~-lwv~~~~~~ 316 (406)
|+ +|++.....
T Consensus 187 g~~l~v~~~~~~ 198 (331)
T 3u4y_A 187 GNFAFVANLIGN 198 (331)
T ss_dssp SSEEEEEETTTT
T ss_pred CCEEEEEeCCCC
Confidence 98 888875543
No 83
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.15 E-value=1.3e-09 Score=108.17 Aligned_cols=182 Identities=12% Similarity=0.147 Sum_probs=114.6
Q ss_pred CcccCcceEEEcCCCCeeEEEecCC-EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADG-RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK- 141 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g-~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~- 141 (406)
.++..|.+|+++++|+ +|++...| +|++++.. ..+.+...... . ......+.++||+++++
T Consensus 24 ~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~----~----------~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEI----V----------NDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTC----C----------CCTTSSCSEEEEEECTTT
T ss_pred CCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCcc----c----------cccCCCCceeEEEECCCc
Confidence 4688999999999999 77777765 79999864 34444322110 0 00012456899999985
Q ss_pred --CCcEEEEeCC-------------CcEEEEeCCCC--e---EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhh
Q 015463 142 --TGDLYIADAY-------------FGLMKVGPEGG--L---ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQR 201 (406)
Q Consensus 142 --~g~L~Vad~~-------------~gl~~~d~~~~--~---~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~ 201 (406)
++.|||+.+. ..|++++.+.+ . .+.+............+.|++++||+||++........
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~ 168 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQ 168 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTS
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCC
Confidence 7899999852 36888876432 2 23333322233356789999999999999965321100
Q ss_pred hccccccccccccccCCCCCC---------CcccCCCCeEEEEeCCCC-----------eEEEecccCCCcceEEEecCC
Q 015463 202 RQMQKENIPLQLCSSLNDPSP---------IKITKDTGRVLKYDPTTK-----------QTTVLLRNLQFPNGLSLSKDK 261 (406)
Q Consensus 202 ~~~~~~~~~~~~~~e~~~~~~---------~~~~~~~g~l~~~d~~t~-----------~~~~~~~~~~~~ngi~l~~d~ 261 (406)
.. .+.+..+.+. -......|+|+|+++++. ..+.+..++.+|.|+++++++
T Consensus 169 ~~---------~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G 239 (454)
T 1cru_A 169 LA---------YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNG 239 (454)
T ss_dssp GG---------GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTS
T ss_pred cc---------ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCC
Confidence 00 0000000000 000123589999999865 456788899999999999976
Q ss_pred CEEEEEeCCCC
Q 015463 262 SFFVFCEGSVG 272 (406)
Q Consensus 262 ~~l~v~~t~~~ 272 (406)
.||+++....
T Consensus 240 -~L~~~d~g~~ 249 (454)
T 1cru_A 240 -KLLQSEQGPN 249 (454)
T ss_dssp -CEEEEEECSS
T ss_pred -CEEEEecCCC
Confidence 5889987543
No 84
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.15 E-value=3.5e-09 Score=101.60 Aligned_cols=154 Identities=17% Similarity=0.179 Sum_probs=103.3
Q ss_pred CcceEEEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccc-cCCcccccccceEEcCC----CCEEEEeCCCchhhhccc
Q 015463 131 GRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE-AEGVPLRFTNDLDIDDE----GNVYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~-~~~~~~~~~~~l~~d~d----G~ly~t~~~~~~~~~~~~ 205 (406)
..|.+|++++ +|+|||++..+.|++++ +++.+.+... ........+++|+++++ |.||++++...
T Consensus 31 ~~P~~ia~~p-dG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~------- 100 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE------- 100 (352)
T ss_dssp SCEEEEEECT-TSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT-------
T ss_pred CCceEEEEcC-CCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC-------
Confidence 5699999999 89999999888899998 3444433221 11112457899999997 89999974200
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCCe---EEEecc-------cCCCcceEEEecCCCEEEEEeC------
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ---TTVLLR-------NLQFPNGLSLSKDKSFFVFCEG------ 269 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~-------~~~~~ngi~l~~d~~~l~v~~t------ 269 (406)
....++|++++.++++ .+.+.. ....++++++++|+ .||++..
T Consensus 101 --------------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~ 159 (352)
T 2ism_A 101 --------------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERE 159 (352)
T ss_dssp --------------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGG
T ss_pred --------------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCc
Confidence 0001578888876542 223322 23467899999999 5888852
Q ss_pred -------CCCeEEEEEeeCCCC----------cceeeeecCCCCCCceEECC-CCCEEEEEccC
Q 015463 270 -------SVGRLHKYWLIGEKA----------GNLEAFAILPGYPDNVRTNE-KGEFWVAIHCR 315 (406)
Q Consensus 270 -------~~~~i~~~~~~g~~~----------~~~~~~~~l~g~pd~i~~d~-~G~lwv~~~~~ 315 (406)
..++|+|++.+|.-. ...+++......|.++++|+ +|+||++....
T Consensus 160 ~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 160 LAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp GGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC
T ss_pred cccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCC
Confidence 136899999876210 13345553223489999999 89999998754
No 85
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.13 E-value=2.3e-08 Score=95.90 Aligned_cols=191 Identities=13% Similarity=0.101 Sum_probs=113.7
Q ss_pred cccCcceEEEcCCCCeeEEEecCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
....|..++++++|+.+|++..+ .|..|+.+ +........ ..+.|..+++++ +|
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~---------------------~~g~~~~~~~sp-dg 94 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP---------------------IGGHPRANDADT-NT 94 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE---------------------CCSSGGGGCTTS-CC
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee---------------------cCCCCccEEECC-CC
Confidence 34579999999999988888776 78777642 222211100 012356677888 67
Q ss_pred c-EE--EEe-------------CCCcEEEEeCC-CCeEE-EcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhcc
Q 015463 144 D-LY--IAD-------------AYFGLMKVGPE-GGLAT-SLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQM 204 (406)
Q Consensus 144 ~-L~--Vad-------------~~~gl~~~d~~-~~~~~-~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~ 204 (406)
+ || +++ ..+.+..++.+ .++.. .+... .......+.++++++||+ +|+++..
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~spdG~~l~~~~~~-------- 165 (365)
T 1jof_A 95 RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNY-EYQENTGIHGMVFDPTETYLYSADLT-------- 165 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETT--------
T ss_pred CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeE-EeCCCCcceEEEECCCCCEEEEEcCC--------
Confidence 6 34 332 22335555543 23332 22110 000124578899999996 7777642
Q ss_pred ccccccccccccCCCCCCCcccCCCCeEEEEeCC-CCeEEEec--c---cCCCcceEEEecCCCEEEEEeCCCCeEEEEE
Q 015463 205 QKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT-TKQTTVLL--R---NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYW 278 (406)
Q Consensus 205 ~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~-t~~~~~~~--~---~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~ 278 (406)
.+.|..|+.+ +++.+.+. . ....|.+++++||++.+|++....+.|..|+
T Consensus 166 ------------------------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 166 ------------------------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp ------------------------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ------------------------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 2568888876 67654331 1 1346788999999999999887667888877
Q ss_pred eeCCCCccee----eeecCC----C---------CCCceE-ECCCCC-EEEEEcc
Q 015463 279 LIGEKAGNLE----AFAILP----G---------YPDNVR-TNEKGE-FWVAIHC 314 (406)
Q Consensus 279 ~~g~~~~~~~----~~~~l~----g---------~pd~i~-~d~~G~-lwv~~~~ 314 (406)
.+. ..+... .+..++ | .|.+++ +++||+ +|++...
T Consensus 222 ~~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 222 IDP-ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp ECT-TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred EeC-CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 652 122211 122222 1 356788 999998 6776543
No 86
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.12 E-value=3.5e-09 Score=99.30 Aligned_cols=184 Identities=8% Similarity=-0.029 Sum_probs=121.5
Q ss_pred cCcceEEEcCCCCeeEEEecC---CEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 69 QGPESMAFDPLGRGPYTGVAD---GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~---g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
..|.+|+++++|+ +|+.... .+|++++.. .++.+.... ....+.|++... ++
T Consensus 72 ~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~---------------------~~~~~~g~~~~~-~~ 128 (306)
T 2p4o_A 72 GKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLP---------------------DAIFLNGITPLS-DT 128 (306)
T ss_dssp SEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECT---------------------TCSCEEEEEESS-SS
T ss_pred CCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCC---------------------CccccCcccccC-CC
Confidence 3689999999999 7776532 368998754 444443221 123467888776 78
Q ss_pred cEEEEeCC-CcEEEEeCCCCeEEEc--ccc----cCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccc
Q 015463 144 DLYIADAY-FGLMKVGPEGGLATSL--ATE----AEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 144 ~L~Vad~~-~gl~~~d~~~~~~~~l--~~~----~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++|+++.. +.|+++|+.+++.+.. ... .....+..+++| +++| .+|++++.
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~------------------- 187 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE------------------- 187 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-------------------
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-------------------
Confidence 89999964 6799999987533221 110 111234578888 4555 79999864
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCC-Ce---EEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTT-KQ---TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA 291 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t-~~---~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~ 291 (406)
.++|++|+.+. ++ .+.+. .+..|.|+++++||+ +|+++...++|.+++.+| +.....
T Consensus 188 -------------~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G----~~~~~~ 248 (306)
T 2p4o_A 188 -------------KMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDR----STTIIA 248 (306)
T ss_dssp -------------TTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCC-EEEECBTTCCEEEECTTC----CEEEEE
T ss_pred -------------CCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCC-EEEEeCCCCeEEEECCCC----CEEEEe
Confidence 36799998764 32 22222 235799999999995 799988889999998653 222221
Q ss_pred --cCC-CCCCceEEC---CCC-CEEEEEccC
Q 015463 292 --ILP-GYPDNVRTN---EKG-EFWVAIHCR 315 (406)
Q Consensus 292 --~l~-g~pd~i~~d---~~G-~lwv~~~~~ 315 (406)
..+ ..|.+++++ +++ .|||+...+
T Consensus 249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 222 358899997 674 599998754
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.11 E-value=7.1e-08 Score=90.30 Aligned_cols=189 Identities=10% Similarity=0.088 Sum_probs=119.6
Q ss_pred CcceEEEcCCCCeeEEEec-CCEEEEEeC---CceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 70 GPESMAFDPLGRGPYTGVA-DGRILFWDG---LKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~-~g~I~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
.|.+++++++|+.+|++.. ++.|..|+. .......... ....|.++++++++..|
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~s~dg~~l 143 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE---------------------GLDGCHSANISPDNRTL 143 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC---------------------CCTTBCCCEECTTSSEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc---------------------CCCCceEEEECCCCCEE
Confidence 7899999999997777665 777888876 2111111110 12347788999943458
Q ss_pred EEEe-CCCcEEEEeCCC-CeEEEcc--cccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCC
Q 015463 146 YIAD-AYFGLMKVGPEG-GLATSLA--TEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 146 ~Vad-~~~gl~~~d~~~-~~~~~l~--~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
|+++ ..+.|..++..+ +++.... .. .......+.+++++++|+ +|+++..
T Consensus 144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~------------------------ 198 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNEL------------------------ 198 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETT------------------------
T ss_pred EEecCCCCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCC------------------------
Confidence 8887 446788888876 6554322 11 011123577899999997 7777632
Q ss_pred CCCcccCCCCeEEEEeC--CCCeEEEe--cc----c---CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceee
Q 015463 221 SPIKITKDTGRVLKYDP--TTKQTTVL--LR----N---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEA 289 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~--~t~~~~~~--~~----~---~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~ 289 (406)
.+.+..|+. .+++.+.. .. + ...+.++++++|++.+|++....+.|..|+++.. .+..+.
T Consensus 199 --------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-~~~~~~ 269 (343)
T 1ri6_A 199 --------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED-GSVLSK 269 (343)
T ss_dssp --------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SCCEEE
T ss_pred --------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-CCceEE
Confidence 256777776 34543322 11 1 1234479999999999988877789999998621 122222
Q ss_pred ee--cCCCCCCceEECCCCC-EEEEEc
Q 015463 290 FA--ILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 290 ~~--~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
.. ...+.|.+++++++|+ +|++..
T Consensus 270 ~~~~~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred eeeecCCCccceEEECCCCCEEEEecC
Confidence 22 2334588999999998 566553
No 88
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.11 E-value=1.1e-08 Score=98.12 Aligned_cols=193 Identities=14% Similarity=0.072 Sum_probs=118.5
Q ss_pred cccCcceEEEcCC---CCeeEEEec----C----CEEEEEeCC-c------eeEEEeecCCCccccCCCCCcccccccCC
Q 015463 67 QIQGPESMAFDPL---GRGPYTGVA----D----GRILFWDGL-K------WTDFAFTSNNRSELCNPKPIATSYLKNEH 128 (406)
Q Consensus 67 ~~~gpe~i~~d~~---g~~ly~g~~----~----g~I~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (406)
...+|.+|+++++ +..+|+... + .+|+|++.+ . .+.+....+. .
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~------------------~ 132 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPG------------------A 132 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEEC------------------C
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCC------------------C
Confidence 3468999999987 444887654 2 689999754 2 1122111000 0
Q ss_pred cCCcceEEEEeCCCCcEEEEeCC--------------CcEEEEeCCCC--------eEEEcccccCCcccccccceEEcC
Q 015463 129 ICGRPLGLRFDKKTGDLYIADAY--------------FGLMKVGPEGG--------LATSLATEAEGVPLRFTNDLDIDD 186 (406)
Q Consensus 129 ~~~~p~gi~~d~~~g~L~Vad~~--------------~gl~~~d~~~~--------~~~~l~~~~~~~~~~~~~~l~~d~ 186 (406)
....+.+|+|++ +|.|||++.. ..|+|+++++. ..+.+.. -+..|+++++|+
T Consensus 133 ~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~-----G~rnp~Gla~d~ 206 (354)
T 3a9g_A 133 YIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY-----GHRNPQGIDWHR 206 (354)
T ss_dssp SSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE-----CCSCCCEEEECT
T ss_pred CCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE-----ccCCcceEEEeC
Confidence 122367899999 8999998632 35999998764 1111111 245789999999
Q ss_pred -CCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCC--------------CC---eEEEeccc
Q 015463 187 -EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT--------------TK---QTTVLLRN 248 (406)
Q Consensus 187 -dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~--------------t~---~~~~~~~~ 248 (406)
+|+||+++...... ..|.++.+. .+ -...+...
T Consensus 207 ~~g~l~v~d~g~~~~-----------------------------dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~ 257 (354)
T 3a9g_A 207 ASGVMVATEHGPVGH-----------------------------DEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSE 257 (354)
T ss_dssp TTCCEEEEECCSSSC-----------------------------CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred CCCCEEEEecCCCCC-----------------------------cEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence 89999998652210 011111110 00 00111122
Q ss_pred CCCcceEEEe-------cCCCEEEEEeCCCCeEEEEEeeCC-CCcceeeee-cCCCCCCceEECCCCCEEEEEc
Q 015463 249 LQFPNGLSLS-------KDKSFFVFCEGSVGRLHKYWLIGE-KAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 249 ~~~~ngi~l~-------~d~~~l~v~~t~~~~i~~~~~~g~-~~~~~~~~~-~l~g~pd~i~~d~~G~lwv~~~ 313 (406)
...|.|+++. .++ .+|+++...++|+++.+++. +....+.+. ...+.|.++++++||.|||++.
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 3457888884 345 68899998899999998753 122223333 3346789999999999999985
No 89
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.06 E-value=5.7e-08 Score=90.74 Aligned_cols=186 Identities=13% Similarity=0.014 Sum_probs=113.5
Q ss_pred CcceEEEcCCCCeeEEE-ecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTG-VADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g-~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
.|.+++++++|+.+|+. ..++.|..++....+........ ........|.++++++++..||++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~s~dg~~l~~~ 99 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS---------------TPEERVKSLFGAALSPDGKTLAIY 99 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC---------------BTTEEEECTTCEEECTTSSEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC---------------CcccccccccceEECCCCCEEEEE
Confidence 48999999999766665 45689999997621111111000 000001257889999843478888
Q ss_pred e------------CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccc
Q 015463 149 D------------AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 149 d------------~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+ ....|..+|.++++....... + ..+.++++++||+ +|+++
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~--------------------- 153 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLG--------------------- 153 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEES---------------------
T ss_pred ecccccccccccccCceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeC---------------------
Confidence 5 346799999988765432221 1 2477899999996 77773
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCC-----------------------
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG----------------------- 272 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~----------------------- 272 (406)
+.++.+|.++++..........+..+++++|++.+|++....+
T Consensus 154 --------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 154 --------------RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp --------------SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred --------------CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 4699999988876544333222334577899888877654433
Q ss_pred eEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC-EEEE
Q 015463 273 RLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVA 311 (406)
Q Consensus 273 ~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~-lwv~ 311 (406)
.|+.+++...+.. ...+......|.+++++++|+ +|++
T Consensus 220 ~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 220 GLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp EEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe
Confidence 3466665432211 111112233466789999997 5666
No 90
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=2.1e-08 Score=91.87 Aligned_cols=143 Identities=14% Similarity=0.122 Sum_probs=96.2
Q ss_pred cceEEEEeCCCCcEEEEeCC---CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccc
Q 015463 132 RPLGLRFDKKTGDLYIADAY---FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKEN 208 (406)
Q Consensus 132 ~p~gi~~d~~~g~L~Vad~~---~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~ 208 (406)
.|.||++++ ++.||+++.. ..|..+|++++++..-... +. ..+..+++.+ ++.+|+++..
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~--~~fgeGi~~~-g~~lyv~t~~------------ 84 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKM-DD--SYFGEGLTLL-NEKLYQVVWL------------ 84 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CT--TCCEEEEEEE-TTEEEEEETT------------
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEec-CC--CcceEEEEEe-CCEEEEEEec------------
Confidence 478999998 6899999853 5799999999876542211 11 2345567776 4589999853
Q ss_pred ccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCccee
Q 015463 209 IPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLE 288 (406)
Q Consensus 209 ~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~ 288 (406)
.+.++.||+++.+...-...- .+.|..+++|++.+|+++ ..+.|+.++.+..+.-. .
T Consensus 85 --------------------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~-~ 141 (266)
T 2iwa_A 85 --------------------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIK-K 141 (266)
T ss_dssp --------------------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEE-E
T ss_pred --------------------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEE-E
Confidence 378999999988654333211 467788889999999998 57899999865322111 1
Q ss_pred eeecCC----CCCCceEECCCCCEEEEEccC
Q 015463 289 AFAILP----GYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 289 ~~~~l~----g~pd~i~~d~~G~lwv~~~~~ 315 (406)
+-.... ..|+.+.+. +|.+|++....
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 111111 135667766 78999887543
No 91
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.05 E-value=4.4e-08 Score=89.25 Aligned_cols=190 Identities=11% Similarity=0.132 Sum_probs=123.2
Q ss_pred CcccCcceEEEcCCCCeeEE-EecCCEEEEEeCC-cee-EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYT-GVADGRILFWDGL-KWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~-g~~~g~I~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
+-...+.+++++++++.||+ ...+++|++++.. .+. .+.. ..+..+-||+++. +
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l----------------------~g~~D~EGIa~~~-~ 80 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL----------------------DFVKDLETIEYIG-D 80 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC----------------------SSCSSEEEEEECS-T
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec----------------------CCCCChHHeEEeC-C
Confidence 33356899999988777886 6667899999987 222 2211 1135688999997 8
Q ss_pred CcEEEEeCC-CcEEEEeCCCC-eEEEcccc---c-CCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccc
Q 015463 143 GDLYIADAY-FGLMKVGPEGG-LATSLATE---A-EGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~-~~~~l~~~---~-~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+.+||++.. ++++.++.... .+..+... . .........+|+.|+++ ++|++...
T Consensus 81 g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~------------------- 141 (255)
T 3qqz_A 81 NQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK------------------- 141 (255)
T ss_dssp TEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES-------------------
T ss_pred CEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc-------------------
Confidence 889999765 56777764322 22211111 1 11223346789999877 79997632
Q ss_pred cCCCCCCCcccCCCCeEEEEe--CCCCeEEEec-------ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 216 SLNDPSPIKITKDTGRVLKYD--PTTKQTTVLL-------RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d--~~t~~~~~~~-------~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
...+|+.++ +.+..+.... ..+..+.+++++|....+|+......+|..++.+|.
T Consensus 142 ------------~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~---- 205 (255)
T 3qqz_A 142 ------------NPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE---- 205 (255)
T ss_dssp ------------SSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----
T ss_pred ------------CCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----
Confidence 123588887 2222333331 123457899999998889999888899999987753
Q ss_pred eeeeecCC-C---------CCCceEECCCCCEEEEEc
Q 015463 287 LEAFAILP-G---------YPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 287 ~~~~~~l~-g---------~pd~i~~d~~G~lwv~~~ 313 (406)
...+..+. | .|.||++|++|++||+.-
T Consensus 206 ~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 206 VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 22222222 1 478999999999999963
No 92
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.05 E-value=4e-08 Score=93.49 Aligned_cols=154 Identities=16% Similarity=0.156 Sum_probs=104.2
Q ss_pred CCcceEEEEeCCCCcEEEEeC-CCcEEEEeCCCCeEEEcccc--cCCcccccccceEEcC----CCCEEEEeCCCchhhh
Q 015463 130 CGRPLGLRFDKKTGDLYIADA-YFGLMKVGPEGGLATSLATE--AEGVPLRFTNDLDIDD----EGNVYFTDSSTNYQRR 202 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~-~~gl~~~d~~~~~~~~l~~~--~~~~~~~~~~~l~~d~----dG~ly~t~~~~~~~~~ 202 (406)
...|.+|++.+ +|+|||+.. .+.|+++++++++.+.+... ........+.+|++++ +|.||++.+.
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~------ 103 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS------ 103 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC------
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec------
Confidence 35699999999 899999998 56799999877765543221 1112245678999998 4899997532
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--------eEEEecc-----cCCCcceEEEecCCCEEEEEeC
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--------QTTVLLR-----NLQFPNGLSLSKDKSFFVFCEG 269 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~~-----~~~~~ngi~l~~d~~~l~v~~t 269 (406)
...++|.||....+ +.+++.. ..++.+.|++.+|+. ||++.-
T Consensus 104 ------------------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~G 158 (347)
T 3das_A 104 ------------------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTG 158 (347)
T ss_dssp ------------------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECB
T ss_pred ------------------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEEC
Confidence 11357888866541 2333332 234556799999995 888731
Q ss_pred -------------CCCeEEEEEeeCCCCc-----ceeeeecCCCCCCceEECCCCCEEEEEccC
Q 015463 270 -------------SVGRLHKYWLIGEKAG-----NLEAFAILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 270 -------------~~~~i~~~~~~g~~~~-----~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
..++|+|++.+|.-.. ..+++......|.++++|++|.||++.+..
T Consensus 159 d~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~ 222 (347)
T 3das_A 159 ESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ 222 (347)
T ss_dssp CTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS
T ss_pred CCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC
Confidence 2578999998763110 235665422348999999999999998754
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.05 E-value=1.9e-07 Score=89.50 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=117.0
Q ss_pred eeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEEeC-CCcEEEEeC
Q 015463 82 GPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIADA-YFGLMKVGP 159 (406)
Q Consensus 82 ~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Vad~-~~gl~~~d~ 159 (406)
++.++..++.|..|+....+...... ....+.++++++ +|+ |+++.. .+.|..+|.
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~---------------------~~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~ 61 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIP---------------------VGSNPMGAVISP-DGTKVYVANAHSNDVSIIDT 61 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE---------------------CSSSEEEEEECT-TSSEEEEEEGGGTEEEEEET
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEee---------------------cCCCcceEEECC-CCCEEEEECCCCCeEEEEEC
Confidence 35567788999999976222111110 023478899999 565 667663 467999999
Q ss_pred CCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCC
Q 015463 160 EGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT 238 (406)
Q Consensus 160 ~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~ 238 (406)
++++....... + ..+.+++++++|+ +|++... .+.|..||.+
T Consensus 62 ~~~~~~~~~~~--~---~~v~~~~~spdg~~l~~~~~~--------------------------------~~~v~v~d~~ 104 (391)
T 1l0q_A 62 ATNNVIATVPA--G---SSPQGVAVSPDGKQVYVTNMA--------------------------------SSTLSVIDTT 104 (391)
T ss_dssp TTTEEEEEEEC--S---SSEEEEEECTTSSEEEEEETT--------------------------------TTEEEEEETT
T ss_pred CCCeEEEEEEC--C---CCccceEECCCCCEEEEEECC--------------------------------CCEEEEEECC
Confidence 88865433221 1 1578899999996 6677532 3779999999
Q ss_pred CCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC-EEEEEccCC
Q 015463 239 TKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCRR 316 (406)
Q Consensus 239 t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~-lwv~~~~~~ 316 (406)
+++..........+.++++++|++.++++....+.|..+++... +..........|..++++++|+ +|++.....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK---AVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 98876665555567899999999999888887889999987532 2111112233467788899987 667655443
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.05 E-value=1.2e-07 Score=92.41 Aligned_cols=254 Identities=11% Similarity=0.091 Sum_probs=154.2
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
...++++.++|+.++++..++.|..|+.+..+...... .....+.++++++++..++++.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD--------------------LTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--------------------CSSSSEEEEEEETTTTEEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--------------------CCCCCeeEEEEcCCCCEEEEEe
Confidence 34568888889877778888999999976211111110 1124578899998444566777
Q ss_pred CC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 150 AY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 150 ~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
.. +.|..+|.++++....... ...+.+++++++|+ +|++...... + ..
T Consensus 231 ~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~--------------~-----------~~ 280 (433)
T 3bws_A 231 WISEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASN--------------Q-----------ES 280 (433)
T ss_dssp TTTTEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCT--------------T-----------CS
T ss_pred cCCCcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCc--------------c-----------cc
Confidence 43 6799999988765332211 12378899999995 5555421000 0 01
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 307 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~ 307 (406)
.+|.|+.||..+++..........+.++++++|++.+|++....+.|..+++.+. +..........+..++++++|+
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---KVQKSIPVFDKPNTIALSPDGK 357 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT---EEEEEEECSSSEEEEEECTTSS
T ss_pred CCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC---cEEEEecCCCCCCeEEEcCCCC
Confidence 3578999999888765544333466789999999999999888889999997632 2111112334467889999998
Q ss_pred -EEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEE
Q 015463 308 -FWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEE 385 (406)
Q Consensus 308 -lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~ 385 (406)
+|++........ ...+ ..+...+.+..+|. +++.+..+.. .. .+..+..
T Consensus 358 ~l~~~~~~~~~~~----------~~~~--------------~~g~~dg~v~~~d~~~~~~~~~~~~-~~----~~~~~~~ 408 (433)
T 3bws_A 358 YLYVSCRGPNHPT----------EGYL--------------KKGLVLGKVYVIDTTTDTVKEFWEA-GN----QPTGLDV 408 (433)
T ss_dssp EEEEEECCCCCTT----------TCTT--------------SCCSSCCEEEEEETTTTEEEEEEEC-SS----SEEEEEE
T ss_pred EEEEEecCCCccc----------cccc--------------cccccceEEEEEECCCCcEEEEecC-CC----CCceEEE
Confidence 677664331110 0000 01122334666665 4666666543 11 2333433
Q ss_pred -eC-CEEEEecCCCCeEEEEeC
Q 015463 386 -KD-GKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 386 -~~-g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+ ..|++++...+.|.++++
T Consensus 409 s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 409 SPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp CTTSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCEEEEEECCCCeEEEEEe
Confidence 23 467777765777877765
No 95
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=1.6e-07 Score=95.41 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=121.3
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeC--CceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC----CCCc
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDG--LKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK----KTGD 144 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~----~~g~ 144 (406)
|.+++++++|+.+|++..++.|..|+. ...+.+.... .+..|.++++++ ++..
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---------------------~g~~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---------------------IGIEARSVESSKFKGYEDRY 239 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---------------------CCSEEEEEEECCSTTCTTTE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---------------------cCCCcceEEeCCCcCCCCCE
Confidence 789999999999999999999999998 4322222111 134588999998 7778
Q ss_pred EEEEeC-CCcEEEEeCCCCeEEEcccc----cCC---cccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 145 LYIADA-YFGLMKVGPEGGLATSLATE----AEG---VPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 145 L~Vad~-~~gl~~~d~~~~~~~~l~~~----~~~---~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
||++.. ...|..+|..+++....... ..+ .+...+..++++++|..++..
T Consensus 240 l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs---------------------- 297 (543)
T 1nir_A 240 TIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN---------------------- 297 (543)
T ss_dssp EEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE----------------------
T ss_pred EEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE----------------------
Confidence 999985 46788999887765332211 011 012246678888877544433
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEE--ecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCC
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTV--LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP 294 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~--~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~ 294 (406)
...+|.|..+|..+.+... ....-.++.+++++||++++|++....+.|..++.+. ++........
T Consensus 298 ---------~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g 365 (543)
T 1nir_A 298 ---------VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVG 365 (543)
T ss_dssp ---------ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECS
T ss_pred ---------ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccC
Confidence 1225789999987653211 1223457889999999999999887778999988653 2211111211
Q ss_pred CC--C-CceE-ECCC-CCEEEEEc
Q 015463 295 GY--P-DNVR-TNEK-GEFWVAIH 313 (406)
Q Consensus 295 g~--p-d~i~-~d~~-G~lwv~~~ 313 (406)
.. | .+.. .+++ |.+|++..
T Consensus 366 ~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 366 KTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp SSBCCTTCEEEEETTTEEEEEEEB
T ss_pred CCCCCCCCcccCCCCCccEEEecc
Confidence 11 2 2333 3555 77898875
No 96
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=7.1e-08 Score=87.57 Aligned_cols=153 Identities=17% Similarity=0.180 Sum_probs=107.2
Q ss_pred CcceEEEcCCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..|+++.+ |+.+|+.++ ++.++.+|.+..+.+.... . .+...|++.| ++.||++
T Consensus 88 FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~------------------~---~~eG~glt~d--g~~L~~S 142 (262)
T 3nol_A 88 FGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFN------------------Y---DGEGWGLTHN--DQYLIMS 142 (262)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEE------------------C---SSCCCCEEEC--SSCEEEC
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEE------------------C---CCCceEEecC--CCEEEEE
Confidence 34778875 345888875 6889999987433332221 0 1235677766 5789999
Q ss_pred eCCCcEEEEeCCCCeEEE-cccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~-l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+....|..+|+++.++.. +.....+.+...+|.+... +|.||+..+.
T Consensus 143 dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~------------------------------- 190 (262)
T 3nol_A 143 DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ------------------------------- 190 (262)
T ss_dssp CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-------------------------------
T ss_pred CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc-------------------------------
Confidence 976789999999876533 2222345677778888876 8999998753
Q ss_pred CCCeEEEEeCCCCeEEEecc--cC-----------CCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 228 DTGRVLKYDPTTKQTTVLLR--NL-----------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~--~~-----------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
.+.|.++|++++++....+ ++ .-+||||++++++.+||+.-.=.+++.+.+.
T Consensus 191 -~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 191 -TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp -SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred -CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 2579999999998765432 11 2469999999999999987544567666654
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.97 E-value=7e-07 Score=84.91 Aligned_cols=198 Identities=15% Similarity=0.124 Sum_probs=116.9
Q ss_pred cCcceEEEcCCCCeeEEEe-cCCEEEEEeCC---ceeEEE---eecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 69 QGPESMAFDPLGRGPYTGV-ADGRILFWDGL---KWTDFA---FTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..|..+++ +|+.+|+.. .++.|..|+.. ....+. ....... . ........|.++++++
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~--~----------~~~~~~~~~~~~~~sp- 164 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGP--D----------KERQTMPHLHCVRITP- 164 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCS--C----------TTTCSSCCEEEEEECT-
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCC--C----------ccccCCCcceEEEECC-
Confidence 46778887 677677766 46778877753 111110 0000000 0 0001134468899999
Q ss_pred CCc-EEEEeCC-CcEEEE--eCCCC----e-EEEc--ccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccc
Q 015463 142 TGD-LYIADAY-FGLMKV--GPEGG----L-ATSL--ATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 142 ~g~-L~Vad~~-~gl~~~--d~~~~----~-~~~l--~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~ 209 (406)
+|+ ||+++.. +.+..+ +..++ + +... ...........+.++++++||+ +|+++..
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------------- 231 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI------------- 231 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-------------
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-------------
Confidence 665 8998865 445555 44443 2 2111 0000011123577899999996 7777632
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec------ccCCCcceEEEecCCCEEEEEeCC-CCeEEEEEeeCC
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL------RNLQFPNGLSLSKDKSFFVFCEGS-VGRLHKYWLIGE 282 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~------~~~~~~ngi~l~~d~~~l~v~~t~-~~~i~~~~~~g~ 282 (406)
.+.|..|+.++++.+.+. .....+.+++++||++++|++... .+.|..|+++.
T Consensus 232 -------------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~- 291 (361)
T 3scy_A 232 -------------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE- 291 (361)
T ss_dssp -------------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT-
T ss_pred -------------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC-
Confidence 356888887777664432 122345689999999999999877 67888888752
Q ss_pred CCcceeeeec--CCCCCCceEECCCCC-EEEEEcc
Q 015463 283 KAGNLEAFAI--LPGYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 283 ~~~~~~~~~~--l~g~pd~i~~d~~G~-lwv~~~~ 314 (406)
..+..+.... ....|.+++++++|+ +|++...
T Consensus 292 ~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 292 TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence 1223222221 234689999999998 6776643
No 98
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=7.1e-08 Score=88.35 Aligned_cols=158 Identities=15% Similarity=0.090 Sum_probs=111.7
Q ss_pred cccCcceEEEcCCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 67 QIQGPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
.-..+|+++.+ |+.+|+.+. ++.+..+|.+..+.+.... .. .+.+.|++.| ++.|
T Consensus 64 ~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~------------------~g--~~~g~glt~D--g~~l 119 (266)
T 2iwa_A 64 DSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFT------------------HQ--MKDGWGLATD--GKIL 119 (266)
T ss_dssp TTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEE------------------CC--SSSCCEEEEC--SSSE
T ss_pred CCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEE------------------CC--CCCeEEEEEC--CCEE
Confidence 33466888886 344787765 6899999987433333221 00 1234566655 5789
Q ss_pred EEEeCCCcEEEEeCCCCeEEE-cccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~-l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
|+++..+.|..+|+++.+... +.....+.+...+|.+... +|.+|++...
T Consensus 120 ~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~---------------------------- 170 (266)
T 2iwa_A 120 YGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ---------------------------- 170 (266)
T ss_dssp EEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT----------------------------
T ss_pred EEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC----------------------------
Confidence 999966789999999876433 3222334566678998888 7899998753
Q ss_pred ccCCCCeEEEEeCCCCeEEEecc--cC------------CCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLR--NL------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~--~~------------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.+.|.++|++++++..... ++ ..+|||+++++++.+||+.....+++.+++..
T Consensus 171 ----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 ----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp ----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred ----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 3679999999998755432 22 35699999999999999998888999998763
No 99
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.93 E-value=2.1e-07 Score=89.31 Aligned_cols=191 Identities=14% Similarity=0.090 Sum_probs=126.6
Q ss_pred CcceEEEEeCCCCcEEEEeCCC----------------cEEEEeCCCC--eEE-Ecc--cccCCcccccccceEEc-C--
Q 015463 131 GRPLGLRFDKKTGDLYIADAYF----------------GLMKVGPEGG--LAT-SLA--TEAEGVPLRFTNDLDID-D-- 186 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~~----------------gl~~~d~~~~--~~~-~l~--~~~~~~~~~~~~~l~~d-~-- 186 (406)
-.++++.+|+ .|+|||-|.+. .|+.+|..++ ++. .+. ... -.+..+.+++++| .
T Consensus 87 vsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~-~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 87 TSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL-VEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG-CCCGGGEEEEEEEESCT
T ss_pred EEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh-cccCCccceEEEecccC
Confidence 4478999998 89999999761 3889999988 543 322 111 1234678999999 2
Q ss_pred -----CCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccC------------
Q 015463 187 -----EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNL------------ 249 (406)
Q Consensus 187 -----dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~------------ 249 (406)
++.+|++|+. .++|++||.++++...+.+..
T Consensus 165 ~~~c~~~~aYItD~~--------------------------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~ 212 (381)
T 3q6k_A 165 KGDCSETFVYITNFL--------------------------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYG 212 (381)
T ss_dssp TTTSCSEEEEEEETT--------------------------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEET
T ss_pred CCCCCccEEEEEcCC--------------------------------CCcEEEEECCCCcEEEEccCCCccccCcceEEC
Confidence 4689999964 256999999888776654211
Q ss_pred -------CCcceEEEecC----CCEEEEEeCCCCeEEEEEee---CCC-CcceeeeecCCCCCCc--eEEC-CCCCEEEE
Q 015463 250 -------QFPNGLSLSKD----KSFFVFCEGSVGRLHKYWLI---GEK-AGNLEAFAILPGYPDN--VRTN-EKGEFWVA 311 (406)
Q Consensus 250 -------~~~ngi~l~~d----~~~l~v~~t~~~~i~~~~~~---g~~-~~~~~~~~~l~g~pd~--i~~d-~~G~lwv~ 311 (406)
....||+|+++ ++.||+.-..+.+++++..+ .+. ....+.+.+.....++ +++| .+|++|++
T Consensus 213 G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~ 292 (381)
T 3q6k_A 213 GKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFA 292 (381)
T ss_dssp TEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEE
T ss_pred CEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEE
Confidence 13468999998 89999999888899998743 221 2223333333212454 5676 88999999
Q ss_pred EccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCC------CEEEEEECCCCCeeeceeEEEE
Q 015463 312 IHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEG------KILQVLEDSKGKVVKAISEVEE 385 (406)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g------~~~~~~~~~~g~~~~~~s~~~~ 385 (406)
.... ..|.++++++ +.-...+++ .. ...+.+..
T Consensus 293 ~~~~--------------------------------------~aI~~w~~~~~~~~~~n~~~l~~d~-~l--~~pd~~~i 331 (381)
T 3q6k_A 293 EANT--------------------------------------KQVSCWNTQKMPLRMKNTDVVYTSS-RF--VFGTDISV 331 (381)
T ss_dssp ESSS--------------------------------------SEEEEEETTSCSBCGGGEEEEEECT-TC--CSEEEEEE
T ss_pred eccC--------------------------------------CeEEEEeCCCCccccCceEEEEECC-Cc--cccCeEEE
Confidence 8544 2377777776 234444554 32 24555554
Q ss_pred -eCCEEEEecCC
Q 015463 386 -KDGKLWMGSVL 396 (406)
Q Consensus 386 -~~g~Ly~Gs~~ 396 (406)
.+|+||+-+..
T Consensus 332 ~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 332 DSKGGLWFMSNG 343 (381)
T ss_dssp CTTSCEEEEECS
T ss_pred CCCCeEEEEECc
Confidence 57899997743
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.92 E-value=3.2e-07 Score=89.21 Aligned_cols=184 Identities=16% Similarity=0.165 Sum_probs=124.1
Q ss_pred ccCcceEEEcCCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 68 IQGPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
...|.+++++++|+.+|+.. .++.|..|+....+...... ..+.|.++++++++..|+
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~---------------------~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD---------------------KIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC---------------------CCSEEEEEEECTTSSEEE
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec---------------------CCCCceEEEEcCCCCEEE
Confidence 34678999999998776654 68999999976222221110 124478999998444677
Q ss_pred EEeC--------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccC
Q 015463 147 IADA--------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 147 Vad~--------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
++.. .+.|+.+|..+++....... ...+.+++++++| .+|++...
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~--------------------- 323 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC--------------------- 323 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------------------
T ss_pred EEECCCCccccCCCeEEEEECCCCcEEeeccC-----CCCcceEEECCCCCEEEEEecC---------------------
Confidence 7773 34688999988765433211 1246788999999 47787543
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC--------------CeEEEEEeeCCC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV--------------GRLHKYWLIGEK 283 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~--------------~~i~~~~~~g~~ 283 (406)
++.+..||.++++..........+.++++++|++.++++.... +.|+.+++..
T Consensus 324 -----------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-- 390 (433)
T 3bws_A 324 -----------CSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-- 390 (433)
T ss_dssp -----------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT--
T ss_pred -----------CCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC--
Confidence 4789999999887665555556678999999999999887653 3888888653
Q ss_pred CcceeeeecCCCCCCceEECCCCCEEEEE
Q 015463 284 AGNLEAFAILPGYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 284 ~~~~~~~~~l~g~pd~i~~d~~G~lwv~~ 312 (406)
++..........+..++++++|+..++.
T Consensus 391 -~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 391 -DTVKEFWEAGNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp -TEEEEEEECSSSEEEEEECTTSCEEEEE
T ss_pred -CcEEEEecCCCCCceEEEcCCCCEEEEE
Confidence 2211111223456788999999854433
No 101
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.90 E-value=3.4e-07 Score=85.94 Aligned_cols=215 Identities=16% Similarity=0.070 Sum_probs=112.4
Q ss_pred CcceEEEcCCCCeeEEE-ecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTG-VADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g-~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
.|.+++++++|+.+|+. ..++.|+.++...-+......... ........|.++++++++..||++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~--------------~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS--------------VPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC--------------STTEEEECSSCEEECTTSSEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccc--------------ccccccccccceEECCCCCEEEEE
Confidence 68999999999867765 467899999976211111110000 000001236789999844467887
Q ss_pred eCC------------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccc-ccccccccc
Q 015463 149 DAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQK-ENIPLQLCS 215 (406)
Q Consensus 149 d~~------------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~-~~~~~~~~~ 215 (406)
... ..|+.+|.++++.......... ...+.++++++||++|+++.. ...|.. .+. ....+
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~l~~~~~~----i~~~d~~~~~-~~~~~ 182 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGSLYVAGPD----IYKMDVKTGK-YTVAL 182 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSCEEEESSS----EEEECTTTCC-EEEEE
T ss_pred cccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCcEEEccCc----EEEEeCCCCc-eeccc
Confidence 743 5789999876542211111111 124678889999998886421 000100 000 00000
Q ss_pred cCCC-CC---------CCcc-cC-------------------------CCCeEEEEeCCCCeEEEec--ccCCCcceEEE
Q 015463 216 SLND-PS---------PIKI-TK-------------------------DTGRVLKYDPTTKQTTVLL--RNLQFPNGLSL 257 (406)
Q Consensus 216 e~~~-~~---------~~~~-~~-------------------------~~g~l~~~d~~t~~~~~~~--~~~~~~ngi~l 257 (406)
.... .. .++. .. ....++.+|..+++++.+. ..-..+.++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (349)
T 1jmx_B 183 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 262 (349)
T ss_dssp CSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE
T ss_pred cccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEe
Confidence 0000 00 0000 00 0011233555555544332 11234567888
Q ss_pred ec-CCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC-EEEE
Q 015463 258 SK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVA 311 (406)
Q Consensus 258 ~~-d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~-lwv~ 311 (406)
++ |++.+|++ .+.|++++++. ++........+.|.+++++++|+ +|++
T Consensus 263 sp~dg~~l~~~---~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 263 SPKDPNQIYGV---LNRLAKYDLKQ---RKLIKAANLDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp CSSCTTEEEEE---ESEEEEEETTT---TEEEEEEECSSCCCEEEECSSSSCEEEE
T ss_pred cCCCCCEEEEE---cCeEEEEECcc---CeEEEEEcCCCCccceEECCCCCEEEEe
Confidence 99 99988887 46899998753 22111222345578899998886 6764
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.88 E-value=1.2e-06 Score=88.93 Aligned_cols=182 Identities=9% Similarity=-0.039 Sum_probs=119.9
Q ss_pred EEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcE
Q 015463 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (406)
Q Consensus 75 ~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl 154 (406)
+++++|.++.++..++.|..||....+.+.... ....|++++++++...||+++..+.|
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~---------------------~g~~~~~v~~spdg~~l~v~~~d~~V 202 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID---------------------TGYAVHISRMSASGRYLLVIGRDARI 202 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE---------------------CSTTEEEEEECTTSCEEEEEETTSEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe---------------------cCcccceEEECCCCCEEEEECCCCeE
Confidence 467788755556778899999976221111110 01237899999955578999988889
Q ss_pred EEEeC--CCCeEEEcccccCCcccccccceEEcC----CCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 155 MKVGP--EGGLATSLATEAEGVPLRFTNDLDIDD----EGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 155 ~~~d~--~~~~~~~l~~~~~~~~~~~~~~l~~d~----dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
..+|. .+++... ....+ ..|..+++++ ||+ +|+++..
T Consensus 203 ~v~D~~~~t~~~~~--~i~~g---~~p~~va~sp~~~~dg~~l~v~~~~------------------------------- 246 (543)
T 1nir_A 203 DMIDLWAKEPTKVA--EIKIG---IEARSVESSKFKGYEDRYTIAGAYW------------------------------- 246 (543)
T ss_dssp EEEETTSSSCEEEE--EEECC---SEEEEEEECCSTTCTTTEEEEEEEE-------------------------------
T ss_pred EEEECcCCCCcEEE--EEecC---CCcceEEeCCCcCCCCCEEEEEEcc-------------------------------
Confidence 99999 6665322 11112 3578999999 985 6666521
Q ss_pred CCCeEEEEeCCCCeEEEeccc------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRN------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~------------~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
.+.+..+|..+++....... -..+.++++++|+..++++....+.|+.++....+.-....+ ....
T Consensus 247 -~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~ 324 (543)
T 1nir_A 247 -PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAP 324 (543)
T ss_dssp -SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCS
T ss_pred -CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCc
Confidence 26688889888765443321 113457899999999999988889999999764322111111 2345
Q ss_pred CCCceEECCCCC-EEEEEccC
Q 015463 296 YPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 296 ~pd~i~~d~~G~-lwv~~~~~ 315 (406)
.|.+++++++|+ ++++....
T Consensus 325 ~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp SCCCEEECTTSCEEEEEEGGG
T ss_pred CccCceECCCCCEEEEEecCC
Confidence 688999999999 56665443
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.88 E-value=2.5e-07 Score=84.07 Aligned_cols=152 Identities=22% Similarity=0.272 Sum_probs=106.2
Q ss_pred CcceEEEcCCCCeeEEEec-CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVA-DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~-~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..|+++.+. +.+|+.++ ++.++.+|.+..+.+.... . .+.+.|++.| ++.||++
T Consensus 97 FgeGit~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~------------------~---~~eGwGLt~D--g~~L~vS 151 (268)
T 3nok_A 97 FAEGLASDG--ERLYQLTWTEGLLFTWSGMPPQRERTTR------------------Y---SGEGWGLCYW--NGKLVRS 151 (268)
T ss_dssp CEEEEEECS--SCEEEEESSSCEEEEEETTTTEEEEEEE------------------C---SSCCCCEEEE--TTEEEEE
T ss_pred ceeEEEEeC--CEEEEEEccCCEEEEEECCcCcEEEEEe------------------C---CCceeEEecC--CCEEEEE
Confidence 347888863 34888764 6889999987444333221 0 1335788877 5799999
Q ss_pred eCCCcEEEEeCCCCeEEE-cccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~-l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+....|..+|+++.++.. +.....+.+..++|.|... +|.||+..+.
T Consensus 152 dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~------------------------------- 199 (268)
T 3nok_A 152 DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH------------------------------- 199 (268)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-------------------------------
T ss_pred CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC-------------------------------
Confidence 976789999999876543 2222355667788888877 8899998753
Q ss_pred CCCeEEEEeCCCCeEEEecc--c------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 015463 228 DTGRVLKYDPTTKQTTVLLR--N------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 279 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~--~------------~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~ 279 (406)
...|.++|++++++....+ + ..-+||||++++++.+|++.-.=.+++.+.+
T Consensus 200 -s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 200 -SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp -CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred -CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 2579999999998765421 1 1256999999999999998654345665543
No 104
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=3.6e-07 Score=82.22 Aligned_cols=153 Identities=17% Similarity=0.155 Sum_probs=107.7
Q ss_pred CcceEEEcCCCCeeEEEe-cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTGV-ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~-~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..|+++.+ |+.+|..+ .++.++++|.+..+.+.... ..+.+.|++.| ++.||++
T Consensus 66 fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~---------------------~~~~Gwglt~d--g~~L~vS 120 (243)
T 3mbr_X 66 FGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFR---------------------YPGEGWALTSD--DSHLYMS 120 (243)
T ss_dssp CEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEE---------------------CSSCCCEEEEC--SSCEEEE
T ss_pred ceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEe---------------------CCCCceEEeeC--CCEEEEE
Confidence 44888876 34488775 46889999987444433221 02346788765 5799999
Q ss_pred eCCCcEEEEeCCCCeEEE-cccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~-l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+....|..+|+++.++.. +.....+.+..++|.+... +|.||+..+.
T Consensus 121 dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~------------------------------- 168 (243)
T 3mbr_X 121 DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL------------------------------- 168 (243)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-------------------------------
T ss_pred CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC-------------------------------
Confidence 987889999999876532 3223356667778888876 8899988753
Q ss_pred CCCeEEEEeCCCCeEEEec--cc------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 228 DTGRVLKYDPTTKQTTVLL--RN------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~--~~------------~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
+..|.++|++++++.... .+ ..-+||||++++++.+||+.-.=.+++.+.+.
T Consensus 169 -s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 169 -TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp -TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred -CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 257999999999876542 11 12469999999999999987544567766654
No 105
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.84 E-value=5.7e-06 Score=76.80 Aligned_cols=185 Identities=9% Similarity=-0.018 Sum_probs=120.6
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
...++++.++++.++++..+|.|..|+.. ......... ........+++.+++..|++
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------------------~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT--------------------SSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE--------------------CSSSCEEEEEECTTSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc--------------------cCCCceEEEEECCCCCEEEE
Confidence 45678999999989999999999999876 211111110 11234568899983345666
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.|..+|.++++....... ....+.++++.++|+..++.+.
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~------------------------------- 203 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQG----HTDGASCIDISNDGTKLWTGGL------------------------------- 203 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET-------------------------------
T ss_pred EeCCCcEEEEeCCCCceeeeeec----ccCceEEEEECCCCCEEEEEec-------------------------------
Confidence 76667799999887754332211 1234678899999977666432
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 307 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~ 307 (406)
+|.+..||..+++.............++++++++.+++... .+.|..+++...+ ...+..-.+....++++++|+
T Consensus 204 -dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 204 -DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME-SSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET-TSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSS
T ss_pred -CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC-CCcEEEEECCCCC---eEEEcCCccceeEEEECCCCC
Confidence 47899999988876554443445578999999998877654 5788888876432 112222223345677888998
Q ss_pred EEEEEcc
Q 015463 308 FWVAIHC 314 (406)
Q Consensus 308 lwv~~~~ 314 (406)
+.++...
T Consensus 279 ~l~~~~~ 285 (337)
T 1gxr_A 279 WFVSTGK 285 (337)
T ss_dssp EEEEEET
T ss_pred EEEEecC
Confidence 6665543
No 106
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.82 E-value=4.7e-07 Score=89.76 Aligned_cols=179 Identities=14% Similarity=0.132 Sum_probs=107.4
Q ss_pred cCcccCcceEEEcCCCC-eeEEEecCCEEEEEeCC-ce--eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 65 LNQIQGPESMAFDPLGR-GPYTGVADGRILFWDGL-KW--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
..++..|.+|++.++|. .+|+....|+|++++.+ .. +.+...... ...+ ......+.++||++++
T Consensus 10 a~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~---~~~g--------~~~~~e~Gllgia~~P 78 (463)
T 2wg3_C 10 VSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKL---VQSG--------IKGGDERGLLSLAFHP 78 (463)
T ss_dssp EEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTT---BCCC--------CSSSCCCSEEEEEECT
T ss_pred ccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcce---eccC--------ccccCCCcceeeEeCC
Confidence 34689999999999984 38888889999999765 21 122221100 0000 0001135589999998
Q ss_pred C---CCcEEEEeCC-------------CcEEEEeCCCC--------eEEEcccccCCcccccccceEEcCCCCEEEEeCC
Q 015463 141 K---TGDLYIADAY-------------FGLMKVGPEGG--------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSS 196 (406)
Q Consensus 141 ~---~g~L~Vad~~-------------~gl~~~d~~~~--------~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~ 196 (406)
+ ++.|||+.+. ..|.|+....+ ..+.+..............|++++||.||++...
T Consensus 79 ~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 79 NYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp THHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 3 4789998542 25777765421 1222222211122356678999999999999754
Q ss_pred CchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--------------------eEEEecccCCCcceEE
Q 015463 197 TNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--------------------QTTVLLRNLQFPNGLS 256 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--------------------~~~~~~~~~~~~ngi~ 256 (406)
........ ...+++ ....|.|+|+|+++. +.+++..++.+|.|++
T Consensus 159 ~~~~~~~~----~~~q~~-----------~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla 223 (463)
T 2wg3_C 159 GMITLDDM----EEMDGL-----------SDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCA 223 (463)
T ss_dssp TTCCHHHH----HHCTTC-----------CSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEE
T ss_pred CCCCCCcc----ccccCc-----------CCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEE
Confidence 22100000 000000 233589999999863 3467888999999999
Q ss_pred EecC-----CC-EEEEEeC
Q 015463 257 LSKD-----KS-FFVFCEG 269 (406)
Q Consensus 257 l~~d-----~~-~l~v~~t 269 (406)
++++ ++ .+|.++.
T Consensus 224 ~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 224 VDRHPTDININLTILCSDS 242 (463)
T ss_dssp EESSCSSTTCSEEEEEECC
T ss_pred ECCCCCCcccceEEEeccc
Confidence 9987 23 4666664
No 107
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.79 E-value=3.5e-06 Score=80.53 Aligned_cols=155 Identities=11% Similarity=0.111 Sum_probs=92.7
Q ss_pred CcceEEEEeCCCCc-EEEEeCCCcEEEEeCC-CCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccc
Q 015463 131 GRPLGLRFDKKTGD-LYIADAYFGLMKVGPE-GGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKE 207 (406)
Q Consensus 131 ~~p~gi~~d~~~g~-L~Vad~~~gl~~~d~~-~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~ 207 (406)
..|..+++++ +|+ ||+++.. .+..++.+ +++...+.....+ ..+.++++++||+ +|+...+.+- ...+
T Consensus 40 ~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~~-~~~~--- 110 (365)
T 1jof_A 40 EPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQPP-YAVY--- 110 (365)
T ss_dssp CCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSSTT-CCEE---
T ss_pred CCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCCc-ceec---
Confidence 3578899999 565 8888876 78888875 6665433221111 1367789999998 3443221000 0000
Q ss_pred cccccccccCCCCCCCcccC----CCCeEEEEeCC-CCeEEEec-----ccCCCcceEEEecCCCEEEEEeCCCCeEEEE
Q 015463 208 NIPLQLCSSLNDPSPIKITK----DTGRVLKYDPT-TKQTTVLL-----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKY 277 (406)
Q Consensus 208 ~~~~~~~~e~~~~~~~~~~~----~~g~l~~~d~~-t~~~~~~~-----~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~ 277 (406)
.. ..|.+..|+.+ +++..... .....+++++++||++.+|+++...++|+.|
T Consensus 111 ------------------~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 111 ------------------ANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp ------------------EEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ------------------cceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 00 13455555543 24443221 1345688999999999999998777899999
Q ss_pred EeeCCCCcceeeee--cC---CCCCCceEECCCCC-EEEEEcc
Q 015463 278 WLIGEKAGNLEAFA--IL---PGYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 278 ~~~g~~~~~~~~~~--~l---~g~pd~i~~d~~G~-lwv~~~~ 314 (406)
+++. .++..... .. ...|..++++++|+ +|++...
T Consensus 173 ~~~~--~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 173 RKLA--SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp EECT--TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred EECC--CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 9861 12222111 21 23488899999997 6777643
No 108
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=5.2e-07 Score=81.96 Aligned_cols=190 Identities=17% Similarity=0.190 Sum_probs=119.2
Q ss_pred eEEEEeCCCCcEEEEeCCC-cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccc
Q 015463 134 LGLRFDKKTGDLYIADAYF-GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQ 212 (406)
Q Consensus 134 ~gi~~d~~~g~L~Vad~~~-gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~ 212 (406)
.||.++ ++.||+++... .|.++|++++++..-. .+. ..+..+++++ .++||+.+..
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~--~~FgeGit~~-g~~Ly~ltw~---------------- 114 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLG--NIFAEGLASD-GERLYQLTWT---------------- 114 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT--TCCEEEEEEC-SSCEEEEESS----------------
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC--CcceeEEEEe-CCEEEEEEcc----------------
Confidence 589998 58999999874 5889999998753322 122 1244567776 4589999853
Q ss_pred ccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec
Q 015463 213 LCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 292 (406)
Q Consensus 213 ~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~ 292 (406)
.+.++.||+++.+...-... .+.|..+++|++.||+++ +.++|+.++.+..+.-. .+-..
T Consensus 115 ----------------~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~-~I~V~ 174 (268)
T 3nok_A 115 ----------------EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVG-AVQVK 174 (268)
T ss_dssp ----------------SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEE-EEECE
T ss_pred ----------------CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEE-EEEeC
Confidence 37899999998876543322 234566668899999997 57899999865321111 11111
Q ss_pred CCC----CCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCC-CCEEE
Q 015463 293 LPG----YPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQ 367 (406)
Q Consensus 293 l~g----~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~ 367 (406)
..+ +++.+... +|.+|++..... .|.++|++ |+++.
T Consensus 175 ~~g~~v~~lNeLe~~-dG~lyanvw~s~--------------------------------------~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 175 LRGQPVELINELECA-NGVIYANIWHSS--------------------------------------DVLEIDPATGTVVG 215 (268)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTCS--------------------------------------EEEEECTTTCBEEE
T ss_pred CCCcccccccccEEe-CCEEEEEECCCC--------------------------------------eEEEEeCCCCcEEE
Confidence 111 23445554 789998885431 26677874 67766
Q ss_pred EEECCC--------C-CeeeceeEEEE--eCCEEEEecCCCCeEEEEeC
Q 015463 368 VLEDSK--------G-KVVKAISEVEE--KDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 368 ~~~~~~--------g-~~~~~~s~~~~--~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+.-.. . .......++.. ..++||+.+-..|.++.+.+
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 664210 0 00012233433 25789999999999988765
No 109
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.76 E-value=2.1e-05 Score=72.86 Aligned_cols=189 Identities=15% Similarity=0.096 Sum_probs=117.9
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
.+.-....++++.++|+.+.+++.+|.|..|+.. ...... . ........+++.+ +
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--~--------------------~h~~~v~~~~~~~-~ 76 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--S--------------------GHKLGISDVAWSS-D 76 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE--C--------------------CCSSCEEEEEECT-T
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh--c--------------------cCCCceEEEEEcC-C
Confidence 4444566889999999988899999999999865 221111 0 0123467889998 5
Q ss_pred Cc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCC
Q 015463 143 GD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPS 221 (406)
Q Consensus 143 g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (406)
++ |..+...+.|..+|.++++........ ...+..+++.++|++.++.+.
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~------------------------- 127 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSF------------------------- 127 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET-------------------------
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCC----CCCEEEEEEcCCCCEEEEEeC-------------------------
Confidence 55 455555566888998877543222111 124677889999987776532
Q ss_pred CCcccCCCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC-CCCCCc
Q 015463 222 PIKITKDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL-PGYPDN 299 (406)
Q Consensus 222 ~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l-~g~pd~ 299 (406)
+|.+..||..+++....... ......++++++++.++.+. ..+.|..+++...+ ....+... ......
T Consensus 128 -------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~ 197 (312)
T 4ery_A 128 -------DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDGLCRIWDTASGQ--CLKTLIDDDNPPVSF 197 (312)
T ss_dssp -------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCC--EEEEECCSSCCCEEE
T ss_pred -------CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCc--eeeEEeccCCCceEE
Confidence 47799999987765443332 23346789999998776554 45788888865321 11112111 111234
Q ss_pred eEECCCCCEEEEEccC
Q 015463 300 VRTNEKGEFWVAIHCR 315 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~ 315 (406)
++++++|++.++....
T Consensus 198 ~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 198 VKFSPNGKYILAATLD 213 (312)
T ss_dssp EEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEcCC
Confidence 6788888866665443
No 110
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.75 E-value=8.8e-07 Score=83.06 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=93.6
Q ss_pred EEEEeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhcccccccccc
Q 015463 135 GLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQ 212 (406)
Q Consensus 135 gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~ 212 (406)
|+++.. ++.+|++... +.|..+|.++++....... .. ...+..++++++|+ +|++...
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~--~~~~~~~~~s~dg~~~~v~~~~---------------- 63 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PD--KFGPGTAMMAPDNRTAYVLNNH---------------- 63 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEEC-SS--CCSSCEEEECTTSSEEEEEETT----------------
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEec-CC--CCCCceeEECCCCCEEEEEeCC----------------
Confidence 345565 7788887655 5799999988865432221 11 11477899999996 7777632
Q ss_pred ccccCCCCCCCcccCCCCeEEEEeCCCCeEEEeccc-------CCCcceEEEecCCCEEEEEeCC-----------CCeE
Q 015463 213 LCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGS-----------VGRL 274 (406)
Q Consensus 213 ~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-------~~~~ngi~l~~d~~~l~v~~t~-----------~~~i 274 (406)
.+.|+.+|.++++....... ...+.++++++|++.++++... .+.|
T Consensus 64 ----------------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 64 ----------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp ----------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred ----------------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeE
Confidence 36799999998876543322 1237899999999999988743 4789
Q ss_pred EEEEeeCCCCcceeeeecCCCCCCceEECCCCCEEEE
Q 015463 275 HKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVA 311 (406)
Q Consensus 275 ~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~ 311 (406)
+.+++...+..........+..+..++++++|++|++
T Consensus 128 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~ 164 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA 164 (349)
T ss_dssp EEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred EEEECCCccccceeeeccCCCcccceeECCCCcEEEc
Confidence 9999864322211111123334677889999998885
No 111
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.75 E-value=3.5e-06 Score=82.26 Aligned_cols=179 Identities=12% Similarity=0.062 Sum_probs=114.3
Q ss_pred CcceEEEcCCCCeeEEEecCC---EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 70 GPESMAFDPLGRGPYTGVADG---RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g---~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
...++++.++|+.++++..++ .|+.++.. +...+.. ..+....+++++ +|+
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-----------------------~~~~~~~~~~sp-dg~ 235 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-----------------------FPRHNGAPAFSP-DGS 235 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-----------------------CSSCEEEEEECT-TSS
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-----------------------CCCcccCEEEcC-CCC
Confidence 456789999999777776664 89999876 2222211 023456789999 666
Q ss_pred -EEEEeCC---CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCC
Q 015463 145 -LYIADAY---FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 145 -L~Vad~~---~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
|+++... ..|+.+|.++++...+.... ..+..+++.+||+ |+++...
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~spdg~~l~~~s~~----------------------- 287 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGR-----SNNTEPTWFPDSQNLAFTSDQ----------------------- 287 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCCCS-----SCEEEEEECTTSSEEEEEECT-----------------------
T ss_pred EEEEEEecCCCceEEEEECCCCCEEeCcCCC-----CcccceEECCCCCEEEEEECC-----------------------
Confidence 5544332 34999999988776553221 2356788999997 5555421
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCC--CCeEEEEEeeCCCCcceeeeecCCCCC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS--VGRLHKYWLIGEKAGNLEAFAILPGYP 297 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~--~~~i~~~~~~g~~~~~~~~~~~l~g~p 297 (406)
.....|+.+|..+++.+.+.........++++||++.++++... ...|+.+++.+. ....+... ...
T Consensus 288 -------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~---~~~~l~~~-~~~ 356 (415)
T 2hqs_A 288 -------AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---GVQVLSST-FLD 356 (415)
T ss_dssp -------TSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---CEEECCCS-SSC
T ss_pred -------CCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC---CEEEecCC-CCc
Confidence 11236999999988766654333445578999999988877653 347888887642 22222211 234
Q ss_pred CceEECCCCCEEEE
Q 015463 298 DNVRTNEKGEFWVA 311 (406)
Q Consensus 298 d~i~~d~~G~lwv~ 311 (406)
..++++++|+..+.
T Consensus 357 ~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 357 ETPSLAPNGTMVIY 370 (415)
T ss_dssp EEEEECTTSSEEEE
T ss_pred CCeEEcCCCCEEEE
Confidence 56778899984443
No 112
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.75 E-value=2.3e-06 Score=79.69 Aligned_cols=157 Identities=13% Similarity=0.026 Sum_probs=98.5
Q ss_pred eeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC-cEEEEeCC-CcEEEEeC
Q 015463 82 GPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG-DLYIADAY-FGLMKVGP 159 (406)
Q Consensus 82 ~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g-~L~Vad~~-~gl~~~d~ 159 (406)
.++++..++.|..++....+...... .....++|.++++++ +| .+|++... +.|..+|.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~------------------~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVIT------------------IADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEE------------------CTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEET
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEE------------------cCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEEC
Confidence 47778889999999976222221110 000001588899999 55 68888765 56999999
Q ss_pred CCCeEEE-cccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeC
Q 015463 160 EGGLATS-LATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDP 237 (406)
Q Consensus 160 ~~~~~~~-l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~ 237 (406)
.+++... +.....+.....+.+++++++| .+|+++....... .+ . ....+.|..+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~-~~---------~-----------~~~~~~i~v~d~ 122 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL-TH---------F-----------EVQPTRVALYDA 122 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS-SC---------E-----------EECCCEEEEEET
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc-cc---------c-----------cccCceEEEEEC
Confidence 8876543 2211111112257889999999 5777752100000 00 0 002478999999
Q ss_pred CCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 238 TTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 238 ~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
++++..........+.++++++|++.++++ .+.|+.+++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~ 163 (337)
T 1pby_B 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEA 163 (337)
T ss_dssp TTTEEEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTT
T ss_pred CCCcEEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCC
Confidence 988765554444567899999999999887 36799998753
No 113
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.75 E-value=1.4e-06 Score=83.31 Aligned_cols=162 Identities=10% Similarity=0.017 Sum_probs=97.0
Q ss_pred cceEEEcCCCCeeEEEec------CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 71 PESMAFDPLGRGPYTGVA------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
..++++.+||+.|.+++. +|.|..++...-... ...|.. ...+ ......+++.+ ++.
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-------~~~~~~--------~~~~-~~~V~~~~~s~-d~~ 107 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-------ESLCTA--------GVQT-EAGVTDVAWVS-EKG 107 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---C-------GGGCSE--------EEEC-SSCEEEEEEET-TTE
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-------eeEecc--------cCCC-CCCEEEEEEcC-CCC
Confidence 478999999997888775 667777764310000 000000 0011 23367899999 788
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
++++...+.|..+|..+++...............+.++++.++|+..++.+.
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---------------------------- 159 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---------------------------- 159 (357)
T ss_dssp EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET----------------------------
T ss_pred EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC----------------------------
Confidence 8888877778888877664322111100001235788999999988776532
Q ss_pred ccCCCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..+|.++++....... ....+.++++++++.++++....+.|..+++..
T Consensus 160 ----dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 160 ----DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp ----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred ----CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 46799999998876554433 234568899998876666665567788877653
No 114
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.75 E-value=1.3e-07 Score=90.68 Aligned_cols=159 Identities=16% Similarity=0.142 Sum_probs=101.4
Q ss_pred CCcceEEEEeCCCCc-EEEEeCCCcEEEEeCCCCeEEEcccc--cCCcccccccceEEcC----CCCEEEEeCCCchhhh
Q 015463 130 CGRPLGLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATE--AEGVPLRFTNDLDIDD----EGNVYFTDSSTNYQRR 202 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~--~~~~~~~~~~~l~~d~----dG~ly~t~~~~~~~~~ 202 (406)
...|.+|++++ +|+ |||++..+.|+++++++...+.+... ........+.+|++++ +|.||++.+....
T Consensus 17 l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~--- 92 (353)
T 2g8s_A 17 LDHPWALAFLP-DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD--- 92 (353)
T ss_dssp ESSEEEEEECS-TTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS---
T ss_pred CCCcEEEEEcC-CCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC---
Confidence 35699999999 899 99999887899999764321222211 0011123568999998 5899999742100
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC-----eEEEeccc-------CCCcceEEEecCCCEEEEEeCC
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK-----QTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGS 270 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~-----~~~~~~~~-------~~~~ngi~l~~d~~~l~v~~t~ 270 (406)
+ +....+|.+++.+.+ ..+++... .++++++++++|+ .||++.-.
T Consensus 93 -------------~---------g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd 149 (353)
T 2g8s_A 93 -------------D---------GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGE 149 (353)
T ss_dssp -------------S---------SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECC
T ss_pred -------------C---------CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECC
Confidence 0 000246888766433 23333322 3447799999999 68898522
Q ss_pred -------------CCeEEEEEeeCCCC----------cceeeeecCCCCCCceEECC-CCCEEEEEccC
Q 015463 271 -------------VGRLHKYWLIGEKA----------GNLEAFAILPGYPDNVRTNE-KGEFWVAIHCR 315 (406)
Q Consensus 271 -------------~~~i~~~~~~g~~~----------~~~~~~~~l~g~pd~i~~d~-~G~lwv~~~~~ 315 (406)
.++|+|++.+|.-. ...+++......|.++++|+ +|+||++....
T Consensus 150 ~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 150 NNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp TTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred CCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 35899999876310 13455553223488999998 89999997653
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.1e-05 Score=75.82 Aligned_cols=197 Identities=9% Similarity=0.124 Sum_probs=116.8
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+.-....++++.++|+.+++++.+|.|..|+........... ...+....+++++ +++
T Consensus 29 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~ 87 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD--------------------GHTGTIWSIDVDC-FTK 87 (369)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEECT-TSS
T ss_pred EEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh--------------------hcCCcEEEEEEcC-CCC
Confidence 4444566889999999989999999999999866212211111 1124467899998 555
Q ss_pred -EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 -LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 -L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
|+.+...+.|..+|.++++....... ...+..+++.++|...++.....
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~------------------------- 137 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKS-----PVPVKRVEFSPCGNYFLAILDNV------------------------- 137 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSSEEEEEECCB-------------------------
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeec-----CCCeEEEEEccCCCEEEEecCCc-------------------------
Confidence 55555556699999887765432221 12467889999998776653210
Q ss_pred cccCCCCeEEEEeCCCCeE------------EEec--ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceee
Q 015463 224 KITKDTGRVLKYDPTTKQT------------TVLL--RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEA 289 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~------------~~~~--~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~ 289 (406)
....|.+..||..++.. ..+. .+......++++++++.++++. ..+.|..|++... ......
T Consensus 138 --~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~-~~~~~~ 213 (369)
T 3zwl_B 138 --MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNN-YEYVDS 213 (369)
T ss_dssp --TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTT-TEEEEE
T ss_pred --cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCC-cEeEEE
Confidence 11125566666544321 1111 1112456788999998876665 4578999987531 111112
Q ss_pred eecCCCCCCceEECCCCCEEEEEccCC
Q 015463 290 FAILPGYPDNVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 290 ~~~l~g~pd~i~~d~~G~lwv~~~~~~ 316 (406)
+..-.+....++++++|++.++.....
T Consensus 214 ~~~~~~~v~~~~~~~~~~~l~~~~~d~ 240 (369)
T 3zwl_B 214 IDLHEKSISDMQFSPDLTYFITSSRDT 240 (369)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EecCCCceeEEEECCCCCEEEEecCCc
Confidence 221223345677888888665554333
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=6.9e-06 Score=83.60 Aligned_cols=192 Identities=14% Similarity=0.108 Sum_probs=121.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEe----CCC
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD----KKT 142 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d----~~~ 142 (406)
..|++++++++|+.+|++..++.|..||.. ..+.+... ..+..|.+++++ +++
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i---------------------~~G~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI---------------------KIGSEARSIETSKMEGWED 255 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE---------------------ECCSEEEEEEECCSTTCTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE---------------------ecCCCCceeEEccccCCCC
Confidence 368899999999999999999999999973 22222211 113568999999 545
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEc-ccc---cCC---cccccccceEEcCCCCEEEEeCCCchhhhcccccccccccc
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSL-ATE---AEG---VPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l-~~~---~~~---~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
..+||++.. +.+..+|..+.+.... ... .++ .+...+..++..+++..|+..
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~-------------------- 315 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN-------------------- 315 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE--------------------
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE--------------------
Confidence 578998876 6788999877654322 111 111 011134456666665544433
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEe--cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVL--LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 292 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~--~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~ 292 (406)
...+|.|..+|..+.+.... ...-.++.++.+++|++++|++....+.|..++.+.. +..-...
T Consensus 316 -----------~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~---kl~~~i~ 381 (567)
T 1qks_A 316 -----------VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG---KLVAIED 381 (567)
T ss_dssp -----------ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEE
T ss_pred -----------ecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC---cEEEEEe
Confidence 22358899998876432111 2234567889999999999999888899999997632 2111122
Q ss_pred C-CCCC---CceE-ECCC-CCEEEEEccC
Q 015463 293 L-PGYP---DNVR-TNEK-GEFWVAIHCR 315 (406)
Q Consensus 293 l-~g~p---d~i~-~d~~-G~lwv~~~~~ 315 (406)
. ...| .+.. ++++ |.+|++...+
T Consensus 382 vgg~~Phpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 382 TGGQTPHPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp CSSSSBCCTTCEEEEETTTEEEEEEEBSS
T ss_pred ccCcCCCCccceeeECCCCCcEEEeCCCC
Confidence 2 2223 3543 4665 6799877533
No 117
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.71 E-value=1.1e-05 Score=73.33 Aligned_cols=197 Identities=13% Similarity=0.155 Sum_probs=122.8
Q ss_pred CcceEEEEeCCCCcEEEE-eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 131 GRPLGLRFDKKTGDLYIA-DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Va-d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
..+-||+++++++.||+. +....|+++|+++...+.+. ..+ ...+.+|+++.+|.+|+++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~--l~g--~~D~EGIa~~~~g~~~vs~E~------------- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP--LDF--VKDLETIEYIGDNQFVISDER------------- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE--CSS--CSSEEEEEECSTTEEEEEETT-------------
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe--cCC--CCChHHeEEeCCCEEEEEECC-------------
Confidence 458899999866789974 44467999999844333332 122 245778999999999998642
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCe-EE---EecccC------CCcceEEEecCCCEEEEEeCCCC-eEEEEE
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ-TT---VLLRNL------QFPNGLSLSKDKSFFVFCEGSVG-RLHKYW 278 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~-~~---~~~~~~------~~~ngi~l~~d~~~l~v~~t~~~-~i~~~~ 278 (406)
.++|+.|+..... .. ...-.+ ....|++++++++.+|++..... +|+.++
T Consensus 90 -------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 90 -------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp -------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred -------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 2556666533222 11 111111 12269999999988888765433 677776
Q ss_pred eeCC-CCcceeeeec------C-CCCCCceEECCC-CCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeec
Q 015463 279 LIGE-KAGNLEAFAI------L-PGYPDNVRTNEK-GEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVG 349 (406)
Q Consensus 279 ~~g~-~~~~~~~~~~------l-~g~pd~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (406)
|. ......+..+ . -.-+.++++|+. |++||-....+
T Consensus 151 --g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~--------------------------------- 195 (255)
T 3qqz_A 151 --GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESR--------------------------------- 195 (255)
T ss_dssp --STTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTT---------------------------------
T ss_pred --ccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCC---------------------------------
Confidence 32 1112222211 0 112578888864 66888775441
Q ss_pred CcceEEEEEECCCCCEEEEEECCCCC-----eeeceeEEEE-eCCEEEEecCCCCeEEEEe
Q 015463 350 GRLHAMAVKYSPEGKILQVLEDSKGK-----VVKAISEVEE-KDGKLWMGSVLMPFVAVYD 404 (406)
Q Consensus 350 ~~~~~~v~~~d~~g~~~~~~~~~~g~-----~~~~~s~~~~-~~g~Ly~Gs~~~~~i~~~~ 404 (406)
.++.+|.+|+++..+.-..|. .+.....+.. .+|+||+.+= .|.++++.
T Consensus 196 -----~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~ 250 (255)
T 3qqz_A 196 -----ALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFT 250 (255)
T ss_dssp -----EEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEE
T ss_pred -----eEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEE
Confidence 388899999988777644442 2345556654 5789999864 67888875
No 118
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.70 E-value=2.5e-07 Score=91.70 Aligned_cols=164 Identities=12% Similarity=0.199 Sum_probs=102.8
Q ss_pred CCcceEEEEeCCCCcEEEEeCCC-cEEEEeCCCCeEEEcccccCC----cccccccceEEcC----CCCEEEEeCCCchh
Q 015463 130 CGRPLGLRFDKKTGDLYIADAYF-GLMKVGPEGGLATSLATEAEG----VPLRFTNDLDIDD----EGNVYFTDSSTNYQ 200 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~~-gl~~~d~~~~~~~~l~~~~~~----~~~~~~~~l~~d~----dG~ly~t~~~~~~~ 200 (406)
...|.+|++++ +|+|||++... .|++++..+++.+.+...... .....+.+|++++ +|.||++.+.....
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 35699999999 89999999875 499999876665544321111 0123466899998 78999997420000
Q ss_pred hhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--e---EEEecc-----cCCCcceEEEecCCCEEEEEeCC
Q 015463 201 RRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--Q---TTVLLR-----NLQFPNGLSLSKDKSFFVFCEGS 270 (406)
Q Consensus 201 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--~---~~~~~~-----~~~~~ngi~l~~d~~~l~v~~t~ 270 (406)
...- . .....+|++++.+.+ + .+++.+ ..+++++|++++|+. ||++.-.
T Consensus 105 ~~~~-----------~---------~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd 163 (454)
T 1cru_A 105 STDK-----------E---------LPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGD 163 (454)
T ss_dssp C--C-----------C---------SCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECC
T ss_pred CCcc-----------c---------cccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECC
Confidence 0000 0 000246888765432 2 233332 245678999999996 8887431
Q ss_pred --------------------------------CCeEEEEEeeCCCC-c-------ceeeeecCCCCCCceEECCCCCEEE
Q 015463 271 --------------------------------VGRLHKYWLIGEKA-G-------NLEAFAILPGYPDNVRTNEKGEFWV 310 (406)
Q Consensus 271 --------------------------------~~~i~~~~~~g~~~-~-------~~~~~~~l~g~pd~i~~d~~G~lwv 310 (406)
.++|+|++.+|.-. + ..++++.-...|.++++|++|+||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~ 243 (454)
T 1cru_A 164 QGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQ 243 (454)
T ss_dssp TTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEE
T ss_pred CCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEE
Confidence 36799999876311 1 2456653223478899999999999
Q ss_pred EEccC
Q 015463 311 AIHCR 315 (406)
Q Consensus 311 ~~~~~ 315 (406)
+.+..
T Consensus 244 ~d~g~ 248 (454)
T 1cru_A 244 SEQGP 248 (454)
T ss_dssp EEECS
T ss_pred EecCC
Confidence 98643
No 119
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.69 E-value=4.4e-05 Score=71.51 Aligned_cols=191 Identities=14% Similarity=0.068 Sum_probs=119.0
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+.-.+..++.+.+++..+.+++.++.|..|+...-+.+..... .......+++.+ +++
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~--------------------~~~~~~~~~~sp-dg~ 135 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA--------------------GPVDAWTLAFSP-DSQ 135 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--------------------CTTCCCCEEECT-TSS
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC--------------------CCccEEEEEECC-CCC
Confidence 34444567888889998888999999999999762122111110 012345688998 565
Q ss_pred E-EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 L-YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 L-~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
. ..+...+.+..++.++++....... ....+..+++.++|++.++.+.
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~----~~~~v~~~~~spdg~~lasg~~--------------------------- 184 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDT----RGKFILSIAYSPDGKYLASGAI--------------------------- 184 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEEC----SSSCEEEEEECTTSSEEEEEET---------------------------
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecC----CCceEEEEEECCCCCEEEEEcC---------------------------
Confidence 4 4444446688888887654332211 1234678899999987776432
Q ss_pred cccCCCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEE
Q 015463 224 KITKDTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRT 302 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~ 302 (406)
+|.|..||..+++......+. ...+.++++||++.++. ....+.|..+++...+ ....+..-.+....+++
T Consensus 185 -----dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s-~s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 185 -----DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT-ASDDGYIKIYDVQHAN--LAGTLSGHASWVLNVAF 256 (321)
T ss_dssp -----TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE-ECTTSCEEEEETTTCC--EEEEECCCSSCEEEEEE
T ss_pred -----CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE-EcCCCeEEEEECCCcc--eeEEEcCCCCceEEEEE
Confidence 477999999888765444433 33578999999986644 4556778888875321 11111111122345778
Q ss_pred CCCCCEEEEEccC
Q 015463 303 NEKGEFWVAIHCR 315 (406)
Q Consensus 303 d~~G~lwv~~~~~ 315 (406)
.++|.+.++....
T Consensus 257 sp~~~~l~s~s~D 269 (321)
T 3ow8_A 257 CPDDTHFVSSSSD 269 (321)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 8899877665544
No 120
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.67 E-value=5.7e-07 Score=84.28 Aligned_cols=163 Identities=11% Similarity=0.122 Sum_probs=106.9
Q ss_pred CcceEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeEEEcc-cccC--CcccccccceEE---cCCCCEEEE-eCCCchhhh
Q 015463 131 GRPLGLRFDKKTGDLYIADAY-FGLMKVGPEGGLATSLA-TEAE--GVPLRFTNDLDI---DDEGNVYFT-DSSTNYQRR 202 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~~~l~-~~~~--~~~~~~~~~l~~---d~dG~ly~t-~~~~~~~~~ 202 (406)
.-|.++++|..++.+|+++.+ .+|.+++++++....+. .... +.+...+.+|.+ |++|+||+. +.+..+...
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 447789998778999999976 67999999876554431 1111 344446789999 789999994 422111100
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCC---CCeEEEecc--------------cCCCcceEEEecCCCEEE
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT---TKQTTVLLR--------------NLQFPNGLSLSKDKSFFV 265 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~---t~~~~~~~~--------------~~~~~ngi~l~~d~~~l~ 265 (406)
.. + ..+...|++||+. +++.....+ ....+|.++++++|+ .|
T Consensus 93 g~-----------------~---~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aY 151 (334)
T 2p9w_A 93 DQ-----------------S---SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SY 151 (334)
T ss_dssp SC-----------------C---SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EE
T ss_pred cc-----------------c---cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EE
Confidence 00 0 1234679999988 665433321 223589999999986 78
Q ss_pred EEeCCC-CeEEEEEeeCCCCcceeeee-c------CCCCCCceEECCCCCEEEEEccCCcc
Q 015463 266 FCEGSV-GRLHKYWLIGEKAGNLEAFA-I------LPGYPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 266 v~~t~~-~~i~~~~~~g~~~~~~~~~~-~------l~g~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
|+++.. ..|++++.+|... ..+. . ..| ++||+..++|++.++....+..
T Consensus 152 Vt~s~~~~~I~rV~pdG~~~---~~~~~~~~~~~~~~G-~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 152 VAFALGMPAIARVSADGKTV---STFAWESGNGGQRPG-YSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp EEEEESSCEEEEECTTSCCE---EEEEECCCCSSSCCS-CSEEEEETTTTEEEEESSSSSE
T ss_pred EeCCCCCCeEEEEeCCCCEE---eeeeecCCCcccccC-cceEEEeCCCCEEEEEcCCCeE
Confidence 988888 8999999886422 2221 1 122 7899999999876666544443
No 121
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.65 E-value=3e-05 Score=73.97 Aligned_cols=198 Identities=13% Similarity=0.072 Sum_probs=124.4
Q ss_pred ccCcceEEEcCCC-CeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC-C
Q 015463 68 IQGPESMAFDPLG-RGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-G 143 (406)
Q Consensus 68 ~~gpe~i~~d~~g-~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~-g 143 (406)
-....++++.++| +.+.++..+|.|..|+.. ........ ....+...++++.+++ .
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG--------------------MGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC--------------------CSTTCBEEEEEEETTEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec--------------------CCcCCceeEEEeCCCCCC
Confidence 3456789999998 788999999999999876 22221110 0113446789998733 3
Q ss_pred cEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 144 DLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 144 ~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
.|+.+...+.|..+|.++.....+..... ....+.++++.++|++.++.+.
T Consensus 133 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--------------------------- 183 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSGSVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGDS--------------------------- 183 (383)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEEECCCC--SSCCEEEEEEETTTTEEEEEET---------------------------
T ss_pred EEEEEeCCCEEEEEECCCCceEEEeccCC--CCCCeEEEEECCCCCEEEEECC---------------------------
Confidence 45566655678899988766555432211 1234778899999987766432
Q ss_pred cccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCC-cceeeeecCCCCCCceEE
Q 015463 224 KITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-GNLEAFAILPGYPDNVRT 302 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~-~~~~~~~~l~g~pd~i~~ 302 (406)
+|.|..||........+.........++++++++.++++....+.|..+++...+. +.........+....+++
T Consensus 184 -----d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 258 (383)
T 3ei3_B 184 -----TGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYF 258 (383)
T ss_dssp -----TSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEE
T ss_pred -----CCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEE
Confidence 47899999865555555444455678999999984445545567888888764221 111111122333456778
Q ss_pred CC-CCCEEEEEccCCcch
Q 015463 303 NE-KGEFWVAIHCRRSLY 319 (406)
Q Consensus 303 d~-~G~lwv~~~~~~~~~ 319 (406)
++ +|.+.++........
T Consensus 259 s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 259 NPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp CTTTSCEEEEEESSSEEE
T ss_pred cCCCCCEEEEEcCCCcEE
Confidence 88 888666655444433
No 122
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.65 E-value=3.8e-05 Score=72.38 Aligned_cols=155 Identities=6% Similarity=-0.035 Sum_probs=98.0
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LY 146 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~ 146 (406)
...+++++++|+.++++..+|.|..|+.. .+....... ........+++.+ +++ |+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~ 68 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--------------------EHNGQVTGVDWAP-DSNRIV 68 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--------------------CCSSCEEEEEEET-TTTEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--------------------CCCCcccEEEEeC-CCCEEE
Confidence 45788999999988889899999999865 222222111 1124467899998 555 55
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
.+...+.|..+|.++++......... ....+.++++.++|++.++.+.
T Consensus 69 ~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~------------------------------ 116 (372)
T 1k8k_C 69 TCGTDRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGSG------------------------------ 116 (372)
T ss_dssp EEETTSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEET------------------------------
T ss_pred EEcCCCeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEeC------------------------------
Confidence 55555668888887775332211111 1234778899999976666432
Q ss_pred CCCCeEEEEeCCCCe----EEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 227 KDTGRVLKYDPTTKQ----TTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~----~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
+|.+..||..+++ ...+... ......++++++++.++.+. ..+.|..|++.
T Consensus 117 --d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~ 172 (372)
T 1k8k_C 117 --SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-CDFKCRIFSAY 172 (372)
T ss_dssp --TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEECC
T ss_pred --CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc-CCCCEEEEEcc
Confidence 3557666665554 2222222 23456899999998776654 45778888854
No 123
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.62 E-value=1.6e-05 Score=73.68 Aligned_cols=184 Identities=10% Similarity=-0.028 Sum_probs=120.3
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
...++++.++++.+++++.+|.|..|+....+...... ...+.+..+++++++..|+++.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~--------------------~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ--------------------GHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee--------------------cccCceEEEEECCCCCEEEEEe
Confidence 34678899999988999999999999976222221111 0124467899998334566666
Q ss_pred CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCC
Q 015463 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDT 229 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 229 (406)
..+.|..+|.++++....... ...+..+++.++|.+.++.+. +
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~--------------------------------~ 245 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHDF-----TSQIFSLGYCPTGEWLAVGME--------------------------------S 245 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-----SSCEEEEEECTTSSEEEEEET--------------------------------T
T ss_pred cCCcEEEEECCCCceEeeecC-----CCceEEEEECCCCCEEEEEcC--------------------------------C
Confidence 667799999887764432211 123677889999976665432 3
Q ss_pred CeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCCEE
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFW 309 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lw 309 (406)
|.+..||..+++...+.........+++++|++.++.+. ..+.|..+++... .........+....++++++|++.
T Consensus 246 ~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG-KDNLLNAWRTPYG---ASIFQSKESSSVLSCDISVDDKYI 321 (337)
T ss_dssp SCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC---CEEEEEECSSCEEEEEECTTSCEE
T ss_pred CcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEec-CCCcEEEEECCCC---eEEEEecCCCcEEEEEECCCCCEE
Confidence 679999998887666554445567899999999776554 4678888887532 111111223334567788888866
Q ss_pred EEEcc
Q 015463 310 VAIHC 314 (406)
Q Consensus 310 v~~~~ 314 (406)
++...
T Consensus 322 ~~~~~ 326 (337)
T 1gxr_A 322 VTGSG 326 (337)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 65443
No 124
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.62 E-value=4.2e-06 Score=80.17 Aligned_cols=76 Identities=13% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 307 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~ 307 (406)
.+.|..+|.++++......... +.+++++||++.+|++.. +.|..++.+..+......+......|.+++++++|+
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 3479999999887655443334 999999999999998763 889999865321011111122344688999999885
No 125
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.61 E-value=4.6e-05 Score=76.75 Aligned_cols=184 Identities=13% Similarity=0.137 Sum_probs=114.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCc--eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-E
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLK--WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-L 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L 145 (406)
....++++.++++.+.++..+|.|..|+... ...+. .....+.++++.+ +++ |
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~-----------------------~~~~~v~~~~~s~-~g~~l 359 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLT-----------------------GHSSSVWGVAFSP-DGQTI 359 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEEC-----------------------CCSSCEEEEEECT-TSSEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEe-----------------------CCCCCEEEEEECC-CCCEE
Confidence 3456789999999888999999999998762 21110 0123467889998 565 4
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
..+...+.+..++..+..+..+... ...+.++++.+||+..++.+.
T Consensus 360 ~~~~~dg~v~~~~~~~~~~~~~~~~-----~~~v~~~~~s~dg~~l~~~~~----------------------------- 405 (577)
T 2ymu_A 360 ASASDDKTVKLWNRNGQLLQTLTGH-----SSSVRGVAFSPDGQTIASASD----------------------------- 405 (577)
T ss_dssp EEEETTSEEEEEETTCCEEEEEECC-----SSCEEEEEECTTSSCEEEEET-----------------------------
T ss_pred EEEeCCCEEEEEcCCCCEEEEecCC-----CCCeEEEEECCCCCEEEEEeC-----------------------------
Confidence 4555545577788765544443221 124678999999976665432
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK 305 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~ 305 (406)
++.|..||........+...-....+++++||++.+..+. ..+.|..++..+. ....+..-.+....++++++
T Consensus 406 ---d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 406 ---DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASAS-DDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPD 478 (577)
T ss_dssp ---TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTSC---EEEEEECCSSCEEEEEECTT
T ss_pred ---CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEc-CCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCC
Confidence 3678888876444444433334456899999998776654 4567877775432 11122111222345778899
Q ss_pred CCEEEEEccCCc
Q 015463 306 GEFWVAIHCRRS 317 (406)
Q Consensus 306 G~lwv~~~~~~~ 317 (406)
|++.++......
T Consensus 479 ~~~las~~~d~~ 490 (577)
T 2ymu_A 479 GQTIASASDDKT 490 (577)
T ss_dssp SCEEEEEETTSE
T ss_pred CCEEEEEeCCCE
Confidence 987776554433
No 126
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=1.5e-05 Score=77.93 Aligned_cols=96 Identities=13% Similarity=-0.054 Sum_probs=63.2
Q ss_pred CCCCeeEEEecC-----CEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC--
Q 015463 78 PLGRGPYTGVAD-----GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA-- 150 (406)
Q Consensus 78 ~~g~~ly~g~~~-----g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~-- 150 (406)
++++.+|+.... +.|..+|....+.+... ..+..| +|+++++...|||++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I---------------------~vG~~P-gia~SpDgk~lyVan~~~ 139 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT---------------------DGGFLP-HPVAAEDGSFFAQASTVF 139 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---------------------EECSSC-EEEECTTSSCEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE---------------------ECCCCC-ceEECCCCCEEEEEeccc
Confidence 466668887653 68999998733333221 113558 9999996667999984
Q ss_pred --------CCcEEEEeCCCCeEEEccccc-CCc--ccccccceEEcCCC-CEEEEeC
Q 015463 151 --------YFGLMKVGPEGGLATSLATEA-EGV--PLRFTNDLDIDDEG-NVYFTDS 195 (406)
Q Consensus 151 --------~~gl~~~d~~~~~~~~l~~~~-~~~--~~~~~~~l~~d~dG-~ly~t~~ 195 (406)
.+.|..+|..+.++..-.... ... ....|..+++++|| .+|+++.
T Consensus 140 ~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 140 ERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF 196 (426)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC
T ss_pred cccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec
Confidence 245999999987653211111 010 12468899999999 6899863
No 127
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.61 E-value=5.9e-06 Score=80.61 Aligned_cols=197 Identities=12% Similarity=0.081 Sum_probs=113.5
Q ss_pred cccCcceEEEcCCCCeeEEEecC------CEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 67 QIQGPESMAFDPLGRGPYTGVAD------GRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~------g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
+...|..++..++| ++.+...+ |+|..+|.+..+....-..+ ....+.++.+.+.+
T Consensus 136 g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~-----------------~~~~~~~Yd~~~~p 197 (462)
T 2ece_A 136 GYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID-----------------RGDQYLAYDFWWNL 197 (462)
T ss_dssp CEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB-----------------CTTCCCCCCEEEET
T ss_pred CCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC-----------------CCCccccceEEECC
Confidence 34579999999998 34433333 68999997733333221100 00123355677788
Q ss_pred CCCcEEEEeC--------------------CCcEEEEeCCCCeEEEcccccCCcccccccceEE--cCCC-CEEEEeC-C
Q 015463 141 KTGDLYIADA--------------------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDI--DDEG-NVYFTDS-S 196 (406)
Q Consensus 141 ~~g~L~Vad~--------------------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~--d~dG-~ly~t~~-~ 196 (406)
+++..++.. .+.|..+|.++++...-.. -+.....|..+.+ +++| ..|++.. +
T Consensus 198 -~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~--vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 198 -PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT--LGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp -TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE--SCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred -CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe--cCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 555444442 4679999998775432111 1212234566655 8888 5777653 0
Q ss_pred CchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-----c-----c-----------CCCcceE
Q 015463 197 TNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-----R-----N-----------LQFPNGL 255 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-----~-----~-----------~~~~ngi 255 (406)
. ....+.|++|..+.++++... . . ...+.+|
T Consensus 275 ~----------------------------~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 275 L----------------------------KDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp T----------------------------TTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred c----------------------------cCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 0 001234443333234332211 0 0 1346789
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec---------------CCCCCCceEECCCCC-EEEEE
Q 015463 256 SLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---------------LPGYPDNVRTNEKGE-FWVAI 312 (406)
Q Consensus 256 ~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~---------------l~g~pd~i~~d~~G~-lwv~~ 312 (406)
.+|+|+++||++....+.|..|++..+...+..-... +.|.|.++.+++||+ +||+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999999999999986332111111111 224599999999998 67765
No 128
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.60 E-value=6.3e-05 Score=75.76 Aligned_cols=181 Identities=13% Similarity=0.104 Sum_probs=113.2
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
...++++.++|+.+.++..+|.|..++.. +...... .....+.++++++ +++ |..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~----------------------~~~~~v~~~~~s~-dg~~l~~ 402 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT----------------------GHSSSVRGVAFSP-DGQTIAS 402 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE----------------------CCSSCEEEEEECT-TSSCEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec----------------------CCCCCeEEEEECC-CCCEEEE
Confidence 44678999999988899999999988865 2211110 0123467899998 555 555
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.|..+|..+..+..+... ...+.++++.+|+.+.++.+.
T Consensus 403 ~~~d~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~s~d~~~l~~~~~------------------------------- 446 (577)
T 2ymu_A 403 ASDDKTVKLWNRNGQLLQTLTGH-----SSSVWGVAFSPDDQTIASASD------------------------------- 446 (577)
T ss_dssp EETTSEEEEECTTCCEEEEEECC-----SSCEEEEEECTTSSEEEEEET-------------------------------
T ss_pred EeCCCEEEEEeCCCCEEEEecCC-----CCCeEEEEECCCCCEEEEEcC-------------------------------
Confidence 55556688888765544443221 124678899999987776432
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE 307 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~ 307 (406)
++.+..||........+.........++++||++.+..+. ..+.|..++..+. ....+..-.+-...++++++|+
T Consensus 447 -d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~-~d~~i~iw~~~~~---~~~~~~~h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 447 -DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQ 521 (577)
T ss_dssp -TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSC---EEEEEECCSSCEEEEEECTTSS
T ss_pred -CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCCC---EEEEEeCCCCCEEEEEEcCCCC
Confidence 3678888876555555443334457899999999776554 4567777775432 1112211112234567889998
Q ss_pred EEEEEcc
Q 015463 308 FWVAIHC 314 (406)
Q Consensus 308 lwv~~~~ 314 (406)
+.++...
T Consensus 522 ~l~s~~~ 528 (577)
T 2ymu_A 522 TIASASD 528 (577)
T ss_dssp CEEEEET
T ss_pred EEEEEEC
Confidence 6665543
No 129
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.59 E-value=5.8e-06 Score=80.67 Aligned_cols=258 Identities=10% Similarity=0.012 Sum_probs=140.1
Q ss_pred CCCCeeEE-EecCCEEEEEeCC----ceeEEEeecCCCccccCCCCCccccccc-CC-cCCcceEEEEeCCCCcEEEEeC
Q 015463 78 PLGRGPYT-GVADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKN-EH-ICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 78 ~~g~~ly~-g~~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
.+++.+|+ +..+++|+.+|.. +.+.. ...+ .| +. +. ...+|+++...+ +| +||+..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~-k~ie----~~----------~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~ 155 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKII-KVIE----PE----------EVKKVSGYSRLHTVHCGP-DA-IYISAL 155 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEE-EEEC----HH----------HHHHHHCEEEEEEEEECS-SC-EEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceee-eeec----hh----------hcccccCCCcccceeECC-Ce-EEEEcC
Confidence 56676776 4667899999854 11111 1110 00 00 01 124799999998 77 999765
Q ss_pred C-------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeC-CCchhhhccccccccccccccCCCCCC
Q 015463 151 Y-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDS-STNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 151 ~-------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
+ +++..+|.++.++..-... ++.+..+..++-..+++++.++.. ..-..... |-...++ +
T Consensus 156 g~~~g~~~g~v~vlD~~T~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~----g~~~~~~-~------ 223 (462)
T 2ece_A 156 GNEEGEGPGGILMLDHYSFEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED----GLKLEHL-K------ 223 (462)
T ss_dssp EETTSCSCCEEEEECTTTCCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT----CCCTTTH-H------
T ss_pred CCcCCCCCCeEEEEECCCCeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCcccccc----ccchhhh-h------
Confidence 4 3799999998775432221 222344567788889988666652 10000000 0000000 0
Q ss_pred CcccCCCCeEEEEeCCCCeEEEeccc---CCCcceEEE--ecCCCEEEEEeC-----CCCeEEEEEeeCCCCcceeee--
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLLRN---LQFPNGLSL--SKDKSFFVFCEG-----SVGRLHKYWLIGEKAGNLEAF-- 290 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~~~---~~~~ngi~l--~~d~~~l~v~~t-----~~~~i~~~~~~g~~~~~~~~~-- 290 (406)
.....+|..||.++++...-..- -..|..|.+ +||++..|++.. ..+.|+++..++.......++
T Consensus 224 ---~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 224 ---DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp ---HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred ---hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 12357899999988764432221 134566766 999999999876 678888877653211111111
Q ss_pred -----e-cC----------CCCCCceEECCCCC-EEEEEccCCcchhhhhhcChhhhhhhhccCcccee--ee---eEee
Q 015463 291 -----A-IL----------PGYPDNVRTNEKGE-FWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKT--HY---LIHV 348 (406)
Q Consensus 291 -----~-~l----------~g~pd~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~---~~~~ 348 (406)
. .+ ++.|..|.+++||+ |||+......+....+. .+...+++.+++..... +. ...+
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeeccccccccccC
Confidence 0 11 25688999999998 89998765444332222 23233444444332100 00 0000
Q ss_pred cCcceEEEEEECCCCCEEEEEE
Q 015463 349 GGRLHAMAVKYSPEGKILQVLE 370 (406)
Q Consensus 349 ~~~~~~~v~~~d~~g~~~~~~~ 370 (406)
.+.++ -++++++|+.+.+-+
T Consensus 380 ~ggPr--~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQ--MLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCC--CEEECTTSSEEEEEC
T ss_pred CCCCC--EEEEcCCCCEEEEEc
Confidence 00122 356789998887754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.58 E-value=3e-05 Score=75.64 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=91.6
Q ss_pred CcceEEEEeCCCCc-EEEEeCCC---cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccc
Q 015463 131 GRPLGLRFDKKTGD-LYIADAYF---GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 131 ~~p~gi~~d~~~g~-L~Vad~~~---gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~ 205 (406)
.....+++++ +|+ |..+.... .|+.+|.++++...+... . ..+..+++.+||+ |+++.+.
T Consensus 179 ~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~spdg~~la~~~~~--------- 243 (415)
T 2hqs_A 179 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSPDGSKLAFALSK--------- 243 (415)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECTTSSEEEEEECT---------
T ss_pred CcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcCCCCEEEEEEec---------
Confidence 3456789999 565 55554433 699999998876654322 1 2466889999997 5555432
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC--CeEEEEEeeCCC
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV--GRLHKYWLIGEK 283 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~--~~i~~~~~~g~~ 283 (406)
.....|+.+|.++++...+.........++++||++.++++.... .+|+.+++.+.+
T Consensus 244 ---------------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 244 ---------------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp ---------------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ---------------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 123469999999888776654444556789999999887776432 378888876432
Q ss_pred CcceeeeecCCCCCCceEECCCCCEEEEE
Q 015463 284 AGNLEAFAILPGYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 284 ~~~~~~~~~l~g~pd~i~~d~~G~lwv~~ 312 (406)
...+....+....++++++|+..+..
T Consensus 303 ---~~~l~~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 303 ---PQRITWEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp ---CEECCCSSSEEEEEEECTTSSEEEEE
T ss_pred ---EEEEecCCCcccCeEECCCCCEEEEE
Confidence 22221111223356788999854443
No 131
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.58 E-value=3.3e-06 Score=82.64 Aligned_cols=224 Identities=11% Similarity=0.008 Sum_probs=122.6
Q ss_pred cCcceEEEcCCCCeeEEEec----------CCEEEEEeCCceeEEEeec-CCCccccCCCCCcccccccCCcCCcceEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVA----------DGRILFWDGLKWTDFAFTS-NNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~----------~g~I~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 137 (406)
..| +|++++||+.+|++.. ++.|..+|....+...... .+. ........|.+++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~--------------~r~~~g~~P~~~~ 183 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA--------------PRFLVGTYQWMNA 183 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC--------------CCCCBSCCGGGSE
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc--------------cccccCCCcceEE
Confidence 368 9999999999999863 5679999887322221110 000 0001135689999
Q ss_pred EeCCCCcEEEEeCC--CcEEEEeCCCCeEEEcccccCCcccccccc----eEEcCCCCEEEEeCCCchhh----hccccc
Q 015463 138 FDKKTGDLYIADAY--FGLMKVGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSSTNYQR----RQMQKE 207 (406)
Q Consensus 138 ~d~~~g~L~Vad~~--~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~----l~~d~dG~ly~t~~~~~~~~----~~~~~~ 207 (406)
++++...|||+... +.|..+|..++++..-.. ..+.....+.+ ++..++|++.+-+.....-. ..+...
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 99955679999853 579999999887542111 11111112222 56667886555443211000 000000
Q ss_pred ccccccccc-CCCCCCCcccCCCCeEEEEeCCCCeEEEecc-------c---CCCcce---EEEecCCCEEEEEeCC---
Q 015463 208 NIPLQLCSS-LNDPSPIKITKDTGRVLKYDPTTKQTTVLLR-------N---LQFPNG---LSLSKDKSFFVFCEGS--- 270 (406)
Q Consensus 208 ~~~~~~~~e-~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-------~---~~~~ng---i~l~~d~~~l~v~~t~--- 270 (406)
..++..... ..+...++.....|.++.+|..++....... . ...|.| +++++|++.+|++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 000000000 0111222223345678888876555433211 0 012333 8999999999998631
Q ss_pred ------CCeEEEEEeeCCCCcceeeee--cCCCCCCceEECCCCC-EEEEEc
Q 015463 271 ------VGRLHKYWLIGEKAGNLEAFA--ILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 271 ------~~~i~~~~~~g~~~~~~~~~~--~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
.+.|++++.+.. ++.. .+++.|.++++++||+ +|...+
T Consensus 343 gthk~~s~~VsVID~~T~-----kvv~~I~vg~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETG-----ERINKIELGHEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TCTTSCEEEEEEEETTTC-----CEEEEEEEEEEECEEEECCSSSCEEEEEE
T ss_pred ccccCCCCEEEEEECCCC-----eEEEEEECCCCcCeEEEccCCCEEEEEEc
Confidence 347999986532 2222 2345699999999998 666655
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.56 E-value=1.9e-05 Score=71.42 Aligned_cols=146 Identities=13% Similarity=0.109 Sum_probs=90.9
Q ss_pred CcceEEEEeCCCCcEEEEeCCCcEEEEeCCC-CeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 131 GRPLGLRFDKKTGDLYIADAYFGLMKVGPEG-GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~~~gl~~~d~~~-~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
+.+.++++++ +|+.++......|+.+|.++ ++...+... .....+.++++.++|+..+.....
T Consensus 42 ~~v~~~~~sp-dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~------------ 105 (297)
T 2ojh_A 42 ELFEAPNWSP-DGKYLLLNSEGLLYRLSLAGDPSPEKVDTG---FATICNNDHGISPDGALYAISDKV------------ 105 (297)
T ss_dssp SCCEEEEECT-TSSEEEEEETTEEEEEESSSCCSCEECCCT---TCCCBCSCCEECTTSSEEEEEECT------------
T ss_pred cceEeeEECC-CCCEEEEEcCCeEEEEeCCCCCCceEeccc---cccccccceEECCCCCEEEEEEeC------------
Confidence 3466889999 67755555567899999988 766554322 112356789999999755554310
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCC--eEEEEEeeCCCCcce
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG--RLHKYWLIGEKAGNL 287 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~--~i~~~~~~g~~~~~~ 287 (406)
......|+.++..+++...+... .....+++++|++.++++....+ +||.+++.+ +..
T Consensus 106 ----------------~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---~~~ 165 (297)
T 2ojh_A 106 ----------------EFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---GVE 165 (297)
T ss_dssp ----------------TTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---CCE
T ss_pred ----------------CCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCC---Ccc
Confidence 11236799999887776555433 23667899999998876554344 455555442 222
Q ss_pred eeeecCCCCCCceEECCCCC-EEEEE
Q 015463 288 EAFAILPGYPDNVRTNEKGE-FWVAI 312 (406)
Q Consensus 288 ~~~~~l~g~pd~i~~d~~G~-lwv~~ 312 (406)
..+....+....+..+++|+ ++++.
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred eEcccCCCccccceECCCCCEEEEEe
Confidence 22322333445677888998 44444
No 133
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.55 E-value=2e-05 Score=75.30 Aligned_cols=215 Identities=13% Similarity=0.091 Sum_probs=118.1
Q ss_pred CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEE
Q 015463 79 LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKV 157 (406)
Q Consensus 79 ~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~ 157 (406)
++. +|+++.++.|+.+|.+ .-......... .....| .++ ++.+|+++..++|+.+
T Consensus 103 ~~~-v~v~~~~g~l~a~d~~tG~~~W~~~~~~------------------~~~~~p---~~~--~~~v~v~~~~g~l~~~ 158 (376)
T 3q7m_A 103 GGH-VYIGSEKAQVYALNTSDGTVAWQTKVAG------------------EALSRP---VVS--DGLVLIHTSNGQLQAL 158 (376)
T ss_dssp TTE-EEEEETTSEEEEEETTTCCEEEEEECSS------------------CCCSCC---EEE--TTEEEEECTTSEEEEE
T ss_pred CCE-EEEEcCCCEEEEEECCCCCEEEEEeCCC------------------ceEcCC---EEE--CCEEEEEcCCCeEEEE
Confidence 454 9999999999999976 22222211100 001223 233 6899999877789999
Q ss_pred eCCCCeEEEcccccCCcc--cccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEE
Q 015463 158 GPEGGLATSLATEAEGVP--LRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKY 235 (406)
Q Consensus 158 d~~~~~~~~l~~~~~~~~--~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~ 235 (406)
|+++|+..-.... .... .......+++ +|.+|++... |.|+.+
T Consensus 159 d~~tG~~~W~~~~-~~~~~~~~~~~~~~~~-~~~v~~g~~~---------------------------------g~l~~~ 203 (376)
T 3q7m_A 159 NEADGAVKWTVNL-DMPSLSLRGESAPTTA-FGAAVVGGDN---------------------------------GRVSAV 203 (376)
T ss_dssp ETTTCCEEEEEEC-CC-----CCCCCCEEE-TTEEEECCTT---------------------------------TEEEEE
T ss_pred ECCCCcEEEEEeC-CCCceeecCCCCcEEE-CCEEEEEcCC---------------------------------CEEEEE
Confidence 9988764321111 1111 1111223344 6788887642 679999
Q ss_pred eCCCCeEEEecccCCCc-------------ceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCceE
Q 015463 236 DPTTKQTTVLLRNLQFP-------------NGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVR 301 (406)
Q Consensus 236 d~~t~~~~~~~~~~~~~-------------ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i~ 301 (406)
|+++|+..-.... ..+ ....+ ++..+|+.. ..+.+..++.+. ++. .+. ...+ ...+.
T Consensus 204 d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~-~~g~l~~~d~~t---G~~-~w~~~~~~-~~~~~ 274 (376)
T 3q7m_A 204 LMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV--VNGVVFALA-YNGNLTALDLRS---GQI-MWKRELGS-VNDFI 274 (376)
T ss_dssp ETTTCCEEEEEEC-CC-----------CCCCCCEE--ETTEEEEEC-TTSCEEEEETTT---CCE-EEEECCCC-EEEEE
T ss_pred ECCCCcEEEEEec-ccCCCCcccccccccCCCcEE--ECCEEEEEe-cCcEEEEEECCC---CcE-EeeccCCC-CCCce
Confidence 9988876432211 111 11122 244676664 457888888652 221 121 1211 23344
Q ss_pred ECCCCCEEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECC-CCCEEEEEECCCCCeeece
Q 015463 302 TNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSP-EGKILQVLEDSKGKVVKAI 380 (406)
Q Consensus 302 ~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~ 380 (406)
.+ ++++|+++..+ .++++|+ +|+.+.......+. ..
T Consensus 275 ~~-~~~l~~~~~~g---------------------------------------~l~~~d~~tG~~~w~~~~~~~~---~~ 311 (376)
T 3q7m_A 275 VD-GNRIYLVDQND---------------------------------------RVMALTIDGGVTLWTQSDLLHR---LL 311 (376)
T ss_dssp EE-TTEEEEEETTC---------------------------------------CEEEEETTTCCEEEEECTTTTS---CC
T ss_pred EE-CCEEEEEcCCC---------------------------------------eEEEEECCCCcEEEeecccCCC---cc
Confidence 43 67899988643 1667775 47776665422222 22
Q ss_pred eEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 381 SEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 381 s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.....+++||+++. ...|..+|.
T Consensus 312 ~~~~~~~~~l~v~~~-~g~l~~~d~ 335 (376)
T 3q7m_A 312 TSPVLYNGNLVVGDS-EGYLHWINV 335 (376)
T ss_dssp CCCEEETTEEEEECT-TSEEEEEET
T ss_pred cCCEEECCEEEEEeC-CCeEEEEEC
Confidence 233346788888876 456777764
No 134
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.52 E-value=0.0001 Score=69.38 Aligned_cols=196 Identities=11% Similarity=0.052 Sum_probs=115.5
Q ss_pred ccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 64 FLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 64 ~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
+.+......++++.++|+.+.+++.+|.|..|+........... ........+++.+ ++
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--------------------~~~~~v~~~~~s~-~~ 109 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP--------------------LRSSWVMTCAYAP-SG 109 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--------------------CSSSCEEEEEECT-TS
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee--------------------cCCccEEEEEECC-CC
Confidence 34555566889999999989999999999999865211111110 0123356789998 56
Q ss_pred cE-EEEeCCCcEEEEeCCCCe--EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 144 DL-YIADAYFGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 144 ~L-~Vad~~~gl~~~d~~~~~--~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
++ ..+...+.+..++..++. .+.... ..+. ...+..+.+.+++.+..+..
T Consensus 110 ~~l~s~~~d~~v~iw~~~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~l~s~s~------------------------- 162 (340)
T 1got_B 110 NYVACGGLDNICSIYNLKTREGNVRVSRE-LAGH-TGYLSCCRFLDDNQIVTSSG------------------------- 162 (340)
T ss_dssp SEEEEEETTCEEEEEETTTCSBSCEEEEE-EECC-SSCEEEEEEEETTEEEEEET-------------------------
T ss_pred CEEEEEeCCCeEEEEECccCCCcceeEEE-ecCC-CccEEEEEECCCCcEEEEEC-------------------------
Confidence 54 445555667788876542 111110 0110 12355666666776544432
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCc
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDN 299 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~ 299 (406)
++.+..||..+++......+. .....++++|+++.++ +....+.|..+++.... ....+..-.+....
T Consensus 163 --------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~ 231 (340)
T 1got_B 163 --------DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV-SGACDASAKLWDVREGM--CRQTFTGHESDINA 231 (340)
T ss_dssp --------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTCS--EEEEECCCSSCEEE
T ss_pred --------CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE-EEeCCCcEEEEECCCCe--eEEEEcCCcCCEEE
Confidence 367999999888765443332 3456889999998654 44456788888865321 11122111222345
Q ss_pred eEECCCCCEEEEEccCCcc
Q 015463 300 VRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~ 318 (406)
++++++|++.++......+
T Consensus 232 v~~~p~~~~l~s~s~d~~v 250 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATC 250 (340)
T ss_dssp EEECTTSSEEEEEETTSCE
T ss_pred EEEcCCCCEEEEEcCCCcE
Confidence 7788999877766554443
No 135
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.52 E-value=3.9e-05 Score=72.32 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=117.2
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC-c---eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL-K---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
..++++.++|+.+.++..++.|..|+.. . ........ ...+....+.+.+ ++.+.
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~l~ 158 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA--------------------GHTGYLSCCRFLD-DNQIV 158 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE--------------------CCSSCEEEEEEEE-TTEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec--------------------CCCccEEEEEECC-CCcEE
Confidence 4577899999988899999999999865 1 11111110 0123355677777 77888
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
.+...+.|..+|.++++........ ...+.++++.++|+++++.+.
T Consensus 159 s~s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~sg~~------------------------------ 204 (340)
T 1got_B 159 TSSGDTTCALWDIETGQQTTTFTGH----TGDVMSLSLAPDTRLFVSGAC------------------------------ 204 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET------------------------------
T ss_pred EEECCCcEEEEECCCCcEEEEEcCC----CCceEEEEECCCCCEEEEEeC------------------------------
Confidence 8877778999999887643322111 124678999999988877532
Q ss_pred CCCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC---CCceEE
Q 015463 227 KDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY---PDNVRT 302 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~---pd~i~~ 302 (406)
+|.+..||..+++......+ ....+.++++|+++.+..+. ..+.|..+++...+ ....+. .... ...+++
T Consensus 205 --d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~d~~v~iwd~~~~~--~~~~~~-~~~~~~~v~~~~~ 278 (340)
T 1got_B 205 --DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS-DDATCRLFDLRADQ--ELMTYS-HDNIICGITSVSF 278 (340)
T ss_dssp --TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE--EEEEEC-CTTCCSCEEEEEE
T ss_pred --CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCc--EEEEEc-cCCcccceEEEEE
Confidence 47799999887765443332 33457899999998765554 45778888865321 111121 1111 234678
Q ss_pred CCCCCEEEEEccC
Q 015463 303 NEKGEFWVAIHCR 315 (406)
Q Consensus 303 d~~G~lwv~~~~~ 315 (406)
+++|++.++....
T Consensus 279 s~~g~~l~~g~~d 291 (340)
T 1got_B 279 SKSGRLLLAGYDD 291 (340)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEECCC
Confidence 8999877665443
No 136
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.52 E-value=5.3e-05 Score=70.99 Aligned_cols=185 Identities=14% Similarity=0.094 Sum_probs=117.7
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
...++++.++|+.+.+++.+|.|..|+.. ........ ........+++++ +|+ |..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~---------------------~~~~~v~~~~~sp-dg~~las 181 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD---------------------TRGKFILSIAYSP-DGKYLAS 181 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE---------------------CSSSCEEEEEECT-TSSEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec---------------------CCCceEEEEEECC-CCCEEEE
Confidence 34578999999989999999999999876 22211111 0123356889998 565 555
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.|..+|..+++....... ....+.++++.++|.+.++.+.
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~l~~spd~~~l~s~s~------------------------------- 226 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEG----HAMPIRSLTFSPDSQLLVTASD------------------------------- 226 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECC----CSSCCCEEEECTTSCEEEEECT-------------------------------
T ss_pred EcCCCeEEEEECCCCcEEEEEcc----cCCceeEEEEcCCCCEEEEEcC-------------------------------
Confidence 55556688999988764322111 1124678999999988777543
Q ss_pred CCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKG 306 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G 306 (406)
+|.+..||..+++......+ ......++++||++.++.+. ..+.|..+++...+ ....+..-.+....++++++|
T Consensus 227 -dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~D~~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 227 -DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS-SDKSVKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNG 302 (321)
T ss_dssp -TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTS
T ss_pred -CCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCE--EEEEEcCCCCcEEEEEECCCC
Confidence 46788999887765443333 23356899999998765554 45778888865321 111221112223456788888
Q ss_pred CEEEEEccC
Q 015463 307 EFWVAIHCR 315 (406)
Q Consensus 307 ~lwv~~~~~ 315 (406)
...++....
T Consensus 303 ~~l~s~~~d 311 (321)
T 3ow8_A 303 SKIVSVGDD 311 (321)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEeCC
Confidence 877665543
No 137
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.51 E-value=0.00017 Score=69.26 Aligned_cols=189 Identities=10% Similarity=-0.000 Sum_probs=104.8
Q ss_pred cCcceEEEcCCCCeeEEEec----------CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVA----------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~----------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
.+| .+++++||+.+|+... ++.|..+|....+.......... ........|.++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-------------~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-------------PRFDVGPYSWMNAN 132 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-------------cccccCCCccceEE
Confidence 468 9999999998999852 46788998763222221110000 00001245889999
Q ss_pred eCCCCcEEEEeCC--CcEEEEeCCCCeEEEc-ccccCCcccccccceEEcCCC-CEEEEeCCCchhhhcccccccccccc
Q 015463 139 DKKTGDLYIADAY--FGLMKVGPEGGLATSL-ATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 139 d~~~g~L~Vad~~--~gl~~~d~~~~~~~~l-~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
+++...||++... +.|..+| +++++... .. .+.++.+.++| +.|++.+.
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--------~~~~~~~~~~~~~~~~~~~~------------------ 185 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--------SPTCYHIHPGAPSTFYLLCA------------------ 185 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--------CCceEEEEeCCCceEEEEcC------------------
Confidence 9966679999753 5699999 88865321 11 11223344444 56666432
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc-----cCCCc--ceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcce
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR-----NLQFP--NGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNL 287 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-----~~~~~--ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~ 287 (406)
+|.+..+|. +++...... .-..+ ...++++++..+|+.. ..+.++.++..+......
T Consensus 186 --------------dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~ 249 (373)
T 2mad_H 186 --------------QGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNK 249 (373)
T ss_pred --------------CCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEe
Confidence 477888888 665442111 00111 1234556666666654 356888888764321111
Q ss_pred eeee-------cCCCCCCc---eEECCCCC-EEEEEcc
Q 015463 288 EAFA-------ILPGYPDN---VRTNEKGE-FWVAIHC 314 (406)
Q Consensus 288 ~~~~-------~l~g~pd~---i~~d~~G~-lwv~~~~ 314 (406)
..+. ...-.|++ ++++++|+ +||+...
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~ 287 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE 287 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCCCEEEEEecc
Confidence 1111 00113565 77888866 8998753
No 138
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.50 E-value=2.6e-05 Score=69.98 Aligned_cols=153 Identities=17% Similarity=0.151 Sum_probs=102.7
Q ss_pred ccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc--cCCCcce
Q 015463 177 RFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR--NLQFPNG 254 (406)
Q Consensus 177 ~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--~~~~~ng 254 (406)
.+..+|.++. +.+|+++.. .+...|.++|++++++..-.. ...+..|
T Consensus 21 ~ftqGL~~~~-~~LyestG~------------------------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeG 69 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE------------------------------TGRSSVRKVDLETGRILQRAEVPPPYFGAG 69 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC------------------------------TTSCEEEEEETTTCCEEEEEECCTTCCEEE
T ss_pred cccccEEEEC-CEEEEECCC------------------------------CCCceEEEEECCCCCEEEEEeCCCCcceeE
Confidence 4677888885 899999842 123579999999998765432 3334456
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhh
Q 015463 255 LSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLL 334 (406)
Q Consensus 255 i~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 334 (406)
+++ +++.+|+.....+.+++|+.+..+ ....+ ..++.+-+++.| .+++|++..+.
T Consensus 70 i~~--~~~~ly~ltw~~~~v~v~D~~tl~--~~~ti-~~~~~Gwglt~d-g~~L~vSdgs~------------------- 124 (243)
T 3mbr_X 70 IVA--WRDRLIQLTWRNHEGFVYDLATLT--PRARF-RYPGEGWALTSD-DSHLYMSDGTA------------------- 124 (243)
T ss_dssp EEE--ETTEEEEEESSSSEEEEEETTTTE--EEEEE-ECSSCCCEEEEC-SSCEEEECSSS-------------------
T ss_pred EEE--eCCEEEEEEeeCCEEEEEECCcCc--EEEEE-eCCCCceEEeeC-CCEEEEECCCC-------------------
Confidence 655 567899998888899999965311 11111 234556677765 35799987432
Q ss_pred ccCccceeeeeEeecCcceEEEEEECCC-CCEEEEEEC-CCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 335 KLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQVLED-SKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~-~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+..+|++ .+++....- .+|..+.....+...+|+||...+..+.|.++|.
T Consensus 125 --------------------~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 125 --------------------VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp --------------------EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred --------------------eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 25667876 455555542 2445555555665679999999999999999986
No 139
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.49 E-value=1.3e-05 Score=72.68 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=101.3
Q ss_pred ccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc--cCCCcce
Q 015463 177 RFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR--NLQFPNG 254 (406)
Q Consensus 177 ~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--~~~~~ng 254 (406)
.|..+|.++ +|.||+++.. .+...|.++|++++++..-.. .-.+..|
T Consensus 43 ~ftqGL~~~-~~~LyestG~------------------------------~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeG 91 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGL------------------------------NGRSSIRKVDIESGKTLQQIELGKRYFGEG 91 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEE------------------------------TTEEEEEEECTTTCCEEEEEECCTTCCEEE
T ss_pred cccceEEEE-CCEEEEECCC------------------------------CCCceEEEEECCCCcEEEEEecCCccceeE
Confidence 356788888 7899999842 112479999999998755432 2234455
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCCEEEEEccCCcchhhhhhcChhhhhhhh
Q 015463 255 LSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFLL 334 (406)
Q Consensus 255 i~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 334 (406)
+++ +++.+|++....+.+++|+.+..+. ...+ ..++.+.+++.| .+.+|++....
T Consensus 92 it~--~g~~ly~ltw~~~~v~v~D~~t~~~--~~ti-~~~~eG~glt~d-g~~L~~SdGs~------------------- 146 (262)
T 3nol_A 92 ISD--WKDKIVGLTWKNGLGFVWNIRNLRQ--VRSF-NYDGEGWGLTHN-DQYLIMSDGTP------------------- 146 (262)
T ss_dssp EEE--ETTEEEEEESSSSEEEEEETTTCCE--EEEE-ECSSCCCCEEEC-SSCEEECCSSS-------------------
T ss_pred EEE--eCCEEEEEEeeCCEEEEEECccCcE--EEEE-ECCCCceEEecC-CCEEEEECCCC-------------------
Confidence 655 5778999987788999999753211 1111 234455677765 35689886422
Q ss_pred ccCccceeeeeEeecCcceEEEEEECCC-CCEEEEEEC-CCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 335 KLPISAKTHYLIHVGGRLHAMAVKYSPE-GKILQVLED-SKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~-~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.+..+|++ .+++....- .+|..+..+..+...+|+||+..+..+.|.++|.
T Consensus 147 --------------------~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 147 --------------------VLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp --------------------EEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECT
T ss_pred --------------------eEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEEC
Confidence 26667877 566666543 2345444444555568999999999999999986
No 140
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.49 E-value=1.2e-06 Score=87.49 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=83.4
Q ss_pred CCcceEEEEeCCCCcEEEEeCC----------------------CcEEEEeCCCCe-------EEEcccc----------
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY----------------------FGLMKVGPEGGL-------ATSLATE---------- 170 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~----------------------~gl~~~d~~~~~-------~~~l~~~---------- 170 (406)
..||-++.+++.+|.+|++-.. +.|+++.++++. ...+...
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 4689999999878999998542 348999765321 2222210
Q ss_pred -------cCCcccccccceEEcCCCCEEE-EeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeE
Q 015463 171 -------AEGVPLRFTNDLDIDDEGNVYF-TDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT 242 (406)
Q Consensus 171 -------~~~~~~~~~~~l~~d~dG~ly~-t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~ 242 (406)
..+..++.|++|++|++|+||| +|.+... ....+ ......++++++.++++
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~------------~g~~~---------~~gnn~v~~~dp~tGel 521 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSN------------AGDFA---------GMGNNQMLCADPATGEI 521 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCC------------SGGGT---------TCCSCEEEEECTTTCCE
T ss_pred ccCccCccccCccCCCCceEECCCCCEEEEeCCCcCc------------ccccc---------ccCCceEEEEeCCCCeE
Confidence 0123588999999999999999 6654211 00011 22345799999999999
Q ss_pred EEeccc--CCCcceEEEecCCCEEEEEeC
Q 015463 243 TVLLRN--LQFPNGLSLSKDKSFFVFCEG 269 (406)
Q Consensus 243 ~~~~~~--~~~~ngi~l~~d~~~l~v~~t 269 (406)
+.++.. ...++|++++||++.|||+-.
T Consensus 522 ~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 522 RRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 888754 356899999999999999854
No 141
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.47 E-value=5.9e-05 Score=72.33 Aligned_cols=191 Identities=8% Similarity=-0.002 Sum_probs=113.5
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCc----eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK----WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~- 144 (406)
...++++.++|+.+.++..+|.|..|+... ....... ....+....+++.+++++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~--------------------~~h~~~v~~~~~~~~~~~~ 128 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARF--------------------SNHSSSVKTVKFNAKQDNV 128 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEEC--------------------CCSSSCCCEEEECSSSTTB
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhc--------------------cCCccceEEEEEcCCCCCE
Confidence 456889999999888999999999998652 1111111 111344678999984255
Q ss_pred EEEEeCCCcEEEEeCCCCe------EEEcccccCCcccccccceEEcCC-CCEEEEeCCCchhhhccccccccccccccC
Q 015463 145 LYIADAYFGLMKVGPEGGL------ATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~------~~~l~~~~~~~~~~~~~~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
|+.+...+.|..+|..+++ ........ ......+.++++.++ +.++++.+.
T Consensus 129 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~--------------------- 186 (416)
T 2pm9_A 129 LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-MSSVDEVISLAWNQSLAHVFASAGS--------------------- 186 (416)
T ss_dssp EEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-CCSSCCCCEEEECSSCTTEEEEESS---------------------
T ss_pred EEEEcCCCeEEEEECCCCccccccccccccccc-cCCCCCeeEEEeCCCCCcEEEEEcC---------------------
Confidence 4555545668889987764 11111000 111235778999998 577776532
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEeccc-------CCCcceEEEecCCCEEEEEeCCCC---eEEEEEeeCCCCcce
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRN-------LQFPNGLSLSKDKSFFVFCEGSVG---RLHKYWLIGEKAGNL 287 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-------~~~~ngi~l~~d~~~l~v~~t~~~---~i~~~~~~g~~~~~~ 287 (406)
+|.|..||..+++....... ......+++++++..++++....+ .|..+++...... .
T Consensus 187 -----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~ 254 (416)
T 2pm9_A 187 -----------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-L 254 (416)
T ss_dssp -----------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-S
T ss_pred -----------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-c
Confidence 47799999988765544332 234578999999854555545455 7888887632111 1
Q ss_pred eeee-cCCCCCCceEECC-CCCEEEEEcc
Q 015463 288 EAFA-ILPGYPDNVRTNE-KGEFWVAIHC 314 (406)
Q Consensus 288 ~~~~-~l~g~pd~i~~d~-~G~lwv~~~~ 314 (406)
..+. .-.+....+++++ +|++.++...
T Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 255 QTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp BCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred EEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 1111 1112234566777 7776555543
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.47 E-value=1.3e-05 Score=83.63 Aligned_cols=161 Identities=10% Similarity=-0.022 Sum_probs=92.8
Q ss_pred cCcceEEEcCCCCeeEEEec-CC-----EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcC--CcceEEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVA-DG-----RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHIC--GRPLGLRF 138 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~-~g-----~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~gi~~ 138 (406)
..+.++++++||+.++++.. ++ .|+.++.+ +.+.+.......+.-+..........+..... .....+++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35778999999997877776 77 89999876 33333221100000000000000000000000 12456789
Q ss_pred eCCCCc-EEEEeCCCcEEEEeCCCC---eEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccc
Q 015463 139 DKKTGD-LYIADAYFGLMKVGPEGG---LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 139 d~~~g~-L~Vad~~~gl~~~d~~~~---~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
++ +|+ |+++. ...|+.+|.+++ +.+.+... ...+..+++.+||+..+..+.
T Consensus 117 Sp-Dg~~l~~~~-~~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SPDG~~la~~~~------------------ 171 (741)
T 2ecf_A 117 SP-DAQRLLFPL-GGELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSPKGGFVSFIRG------------------ 171 (741)
T ss_dssp CT-TSSEEEEEE-TTEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECTTSSEEEEEET------------------
T ss_pred CC-CCCEEEEEe-CCcEEEEECCCCCcceEEEcccC-----CcccccccCCCCCCEEEEEeC------------------
Confidence 99 665 55554 478999999887 55443321 123677899999974333221
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCC-----------------cceEEEecCCCEEEEEeC
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQF-----------------PNGLSLSKDKSFFVFCEG 269 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~-----------------~ngi~l~~d~~~l~v~~t 269 (406)
+.|+.+|.++++...+...... ..+++++||++.++++..
T Consensus 172 ---------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 172 ---------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp ---------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred ---------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 4699999988877665432221 467999999998887743
No 143
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.47 E-value=1.4e-05 Score=77.03 Aligned_cols=227 Identities=9% Similarity=-0.040 Sum_probs=120.5
Q ss_pred cCcceEEEcCCCCeeEEEe----------cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 69 QGPESMAFDPLGRGPYTGV----------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~----------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
.+|. +++++||+.+|+.. .++.|..||....+......-..+ ........|.++++
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g-------------~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA-------------PRFLVGTYPWMTSL 144 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC-------------CCCCBSCCGGGEEE
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc-------------cccccCCCCceEEE
Confidence 4586 99999999899875 246689998873322221100000 00011346999999
Q ss_pred eCCCCcEEEEeC--CCcEEEEeCCCCeEEEcccccCCcccccccc----eEEcCCCCEEEEeCCC--chhh--hccc-cc
Q 015463 139 DKKTGDLYIADA--YFGLMKVGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSST--NYQR--RQMQ-KE 207 (406)
Q Consensus 139 d~~~g~L~Vad~--~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~----l~~d~dG~ly~t~~~~--~~~~--~~~~-~~ 207 (406)
++++..|||+.. .+.|..+|..++++..-.. ..+....+|.+ +++.+||.+.+-+... +... .... ..
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~ 223 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE 223 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccc
Confidence 995557999985 3679999999887543211 11211122333 3667788655554321 1100 0000 00
Q ss_pred cccccccccC-CCCCCCcccCCCCeEEEEeCCCCeEEEeccc----------CCCc---ceEEEecCCCEEEEEeC----
Q 015463 208 NIPLQLCSSL-NDPSPIKITKDTGRVLKYDPTTKQTTVLLRN----------LQFP---NGLSLSKDKSFFVFCEG---- 269 (406)
Q Consensus 208 ~~~~~~~~e~-~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~----------~~~~---ngi~l~~d~~~l~v~~t---- 269 (406)
..++..-.+. ...+.+......|.++.+|..++..+....- -..| ..++++++++.+|++..
T Consensus 224 ~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 224 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred cccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 0000000000 0011121123356778888766543332110 0112 34888999999999853
Q ss_pred -----CCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC--EEEEEc
Q 015463 270 -----SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE--FWVAIH 313 (406)
Q Consensus 270 -----~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~--lwv~~~ 313 (406)
..++|+.++++.. +..-...+...|.++++++||+ ||++..
T Consensus 304 ~~hk~~~~~V~viD~~t~---kv~~~i~vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTG---ERLAKFEMGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TCTTSCEEEEEEEETTTC---CEEEEEEEEEEECEEEECSSSSCEEEEEET
T ss_pred cccCCCCCEEEEEECCCC---eEEEEEECCCCcceEEECCCCCeEEEEEcC
Confidence 1367999997632 2111222334578999999996 455553
No 144
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.45 E-value=2.2e-05 Score=74.84 Aligned_cols=151 Identities=11% Similarity=0.084 Sum_probs=97.6
Q ss_pred cceEEEEeCCCCcEEEEe-------------CCCcEEEEeCC--CCeEEEccccc--CCcccccccceEEcC--CC--CE
Q 015463 132 RPLGLRFDKKTGDLYIAD-------------AYFGLMKVGPE--GGLATSLATEA--EGVPLRFTNDLDIDD--EG--NV 190 (406)
Q Consensus 132 ~p~gi~~d~~~g~L~Vad-------------~~~gl~~~d~~--~~~~~~l~~~~--~~~~~~~~~~l~~d~--dG--~l 190 (406)
.|-.|++++ +|.+|++. ..+.|+++|++ +.+.+.+.... .......|.+|.+.+ +| +|
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 477888988 89999996 34569999987 34555553221 111223677877644 56 58
Q ss_pred EEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec----ccCCCcceEEEecCCCEEEE
Q 015463 191 YFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL----RNLQFPNGLSLSKDKSFFVF 266 (406)
Q Consensus 191 y~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~----~~~~~~ngi~l~~d~~~l~v 266 (406)
|+.+... ....-.|++++++++....+. ..+..+|.+++.++|. +|+
T Consensus 130 ~Vvnh~~----------------------------~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyv 180 (355)
T 3sre_A 130 LVVNHPG----------------------------SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYA 180 (355)
T ss_dssp EEEECST----------------------------TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEE
T ss_pred EEEECCC----------------------------CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEe
Confidence 8887531 111234899999876654432 3466789999999885 666
Q ss_pred EeC-----------------CCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCCC-EEEEEccCCc
Q 015463 267 CEG-----------------SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIHCRRS 317 (406)
Q Consensus 267 ~~t-----------------~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~-lwv~~~~~~~ 317 (406)
++. ..++|++|+. ++.++..+.-..|+||++++||+ +|++....+.
T Consensus 181 t~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~ 244 (355)
T 3sre_A 181 TNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVAEGFDFANGINISPDGKYVYIAELLAHK 244 (355)
T ss_dssp EESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred cCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEeecCCcccCcceECCCCCEEEEEeCCCCe
Confidence 653 2367888864 23344443234699999999996 8999865543
No 145
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=6.1e-05 Score=71.94 Aligned_cols=223 Identities=13% Similarity=0.030 Sum_probs=121.5
Q ss_pred CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEE
Q 015463 79 LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKV 157 (406)
Q Consensus 79 ~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~ 157 (406)
++. +|+++.+|+|+.++.. ............. ........| .++ ++.+|++....+|+.+
T Consensus 143 ~~~-v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~-------------~~~~~~~~~---~~~--~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 143 DGL-VLIHTSNGQLQALNEADGAVKWTVNLDMPS-------------LSLRGESAP---TTA--FGAAVVGGDNGRVSAV 203 (376)
T ss_dssp TTE-EEEECTTSEEEEEETTTCCEEEEEECCC------------------CCCCCC---EEE--TTEEEECCTTTEEEEE
T ss_pred CCE-EEEEcCCCeEEEEECCCCcEEEEEeCCCCc-------------eeecCCCCc---EEE--CCEEEEEcCCCEEEEE
Confidence 444 8999999999999975 2222211110000 000000112 333 5789999877789999
Q ss_pred eCCCCeEEEccccc--CCc-ccc---cccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCe
Q 015463 158 GPEGGLATSLATEA--EGV-PLR---FTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGR 231 (406)
Q Consensus 158 d~~~~~~~~l~~~~--~~~-~~~---~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~ 231 (406)
|+++|+..-..... .+. ... ......+..+|.+|+++.. |+
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~---------------------------------g~ 250 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN---------------------------------GN 250 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT---------------------------------SC
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC---------------------------------cE
Confidence 99888653211110 000 000 0111112236789998642 67
Q ss_pred EEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CCC-CCCceEECCCCCEE
Q 015463 232 VLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPG-YPDNVRTNEKGEFW 309 (406)
Q Consensus 232 l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~g-~pd~i~~d~~G~lw 309 (406)
|+.+|+++|+..... ......++++ +++.+|+... .+.|+.++.+. ++..-... +.+ ....... .+|.+|
T Consensus 251 l~~~d~~tG~~~w~~-~~~~~~~~~~--~~~~l~~~~~-~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~-~~~~l~ 322 (376)
T 3q7m_A 251 LTALDLRSGQIMWKR-ELGSVNDFIV--DGNRIYLVDQ-NDRVMALTIDG---GVTLWTQSDLLHRLLTSPVL-YNGNLV 322 (376)
T ss_dssp EEEEETTTCCEEEEE-CCCCEEEEEE--ETTEEEEEET-TCCEEEEETTT---CCEEEEECTTTTSCCCCCEE-ETTEEE
T ss_pred EEEEECCCCcEEeec-cCCCCCCceE--ECCEEEEEcC-CCeEEEEECCC---CcEEEeecccCCCcccCCEE-ECCEEE
Confidence 999999988764322 2223334444 4567888764 57899998653 22111111 111 1222333 357799
Q ss_pred EEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCC
Q 015463 310 VAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDG 388 (406)
Q Consensus 310 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g 388 (406)
+++..+ .+.++|+ +|+++..+....+. ..+.....++
T Consensus 323 v~~~~g---------------------------------------~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~ 360 (376)
T 3q7m_A 323 VGDSEG---------------------------------------YLHWINVEDGRFVAQQKVDSSG---FQTEPVAADG 360 (376)
T ss_dssp EECTTS---------------------------------------EEEEEETTTCCEEEEEECCTTC---BCSCCEEETT
T ss_pred EEeCCC---------------------------------------eEEEEECCCCcEEEEEecCCCc---ceeCCEEECC
Confidence 887544 3777884 58888777643332 1233345689
Q ss_pred EEEEecCCCCeEEEEe
Q 015463 389 KLWMGSVLMPFVAVYD 404 (406)
Q Consensus 389 ~Ly~Gs~~~~~i~~~~ 404 (406)
+||+++. +..|..++
T Consensus 361 ~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 361 KLLIQAK-DGTVYSIT 375 (376)
T ss_dssp EEEEEBT-TSCEEEEE
T ss_pred EEEEEeC-CCEEEEEe
Confidence 9999997 45577765
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.45 E-value=9.9e-05 Score=70.61 Aligned_cols=184 Identities=13% Similarity=0.089 Sum_probs=110.6
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
...++++.++|+.++++..+|.|..|+.. ...... . ........+++.+++..|+++
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~--~--------------------~~~~~v~~~~~~~~~~~l~~~ 167 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVL--N--------------------FHRAPIVSVKWNKDGTHIISM 167 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEE--C--------------------CCCSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeec--c--------------------CCCccEEEEEECCCCCEEEEE
Confidence 45788999999989999999999999854 211111 0 112446789999833346667
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCc-----------ccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGV-----------PLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~-----------~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
...+.|..+|..+++........... ....+..+++.+++.++++..
T Consensus 168 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 225 (425)
T 1r5m_A 168 DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP---------------------- 225 (425)
T ss_dssp ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG----------------------
T ss_pred ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC----------------------
Confidence 66677999999877643322111100 001166777777776665542
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY 296 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~ 296 (406)
.|.|..||..+++...... .......++++++++.++.+. ..+.|..+++...+ ....+....+.
T Consensus 226 -----------~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~~~~~~ 291 (425)
T 1r5m_A 226 -----------KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGN--SQNCFYGHSQS 291 (425)
T ss_dssp -----------GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBS--CSEEECCCSSC
T ss_pred -----------CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCc--cceEecCCCcc
Confidence 3679999988765433322 223346789999998776655 45778888765321 11122112222
Q ss_pred CCceEECCCCCEEEEE
Q 015463 297 PDNVRTNEKGEFWVAI 312 (406)
Q Consensus 297 pd~i~~d~~G~lwv~~ 312 (406)
...+++.++| ++++.
T Consensus 292 i~~~~~~~~~-~l~~~ 306 (425)
T 1r5m_A 292 IVSASWVGDD-KVISC 306 (425)
T ss_dssp EEEEEEETTT-EEEEE
T ss_pred EEEEEECCCC-EEEEE
Confidence 3456777788 44433
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.44 E-value=0.00035 Score=64.55 Aligned_cols=159 Identities=11% Similarity=0.078 Sum_probs=101.8
Q ss_pred ccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 64 FLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 64 ~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
+.+.-....++++.++|..+.++..+|.|..|+........... ........+++.+ ++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~ 67 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ--------------------VTETPVRAGKFIA-RK 67 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEEEG-GG
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee--------------------ccCCcEEEEEEeC-CC
Confidence 34444566889999999989999999999999976222211111 0012245678888 55
Q ss_pred c-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 144 D-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 144 ~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
+ |..+...+.|..+|.++++........ ...++++++.+++.+.++.+.
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~-------------------------- 117 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSD-------------------------- 117 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET--------------------------
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCC----CCcEEEEEEcCCCCEEEEECC--------------------------
Confidence 5 555665567889998877643221111 134778999999987776532
Q ss_pred CcccCCCCeEEEEeCCCC-eEEEeccc-CCCcceEEEecC-CCEEEEEeCCCCeEEEEEee
Q 015463 223 IKITKDTGRVLKYDPTTK-QTTVLLRN-LQFPNGLSLSKD-KSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~-~~~~~~~~-~~~~ngi~l~~d-~~~l~v~~t~~~~i~~~~~~ 280 (406)
+|.+..+|.+++ .......+ ......++++|+ +..+ ++....+.|..+++.
T Consensus 118 ------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l-~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 118 ------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF-ASGCLDRTVKVWSLG 171 (304)
T ss_dssp ------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE-EEEETTSEEEEEETT
T ss_pred ------CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE-EEEeCCCeEEEEECC
Confidence 467888887765 33333322 234568899984 5544 555556788888864
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.42 E-value=0.00022 Score=67.52 Aligned_cols=184 Identities=10% Similarity=0.057 Sum_probs=109.3
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE-E
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-Y 146 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L-~ 146 (406)
..++++.+++. +.+++.+|.|..|+.. + ........ ..| .+....++|.+ +|++ .
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~------------------~~H-~~~V~~v~~sp-dg~~l~ 143 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCK------------------YEH-DDIVSTVSVLS-SGTQAV 143 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEE------------------ECC-SSCEEEEEECT-TSSEEE
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccc------------------cCC-CCCEEEEEECC-CCCEEE
Confidence 45788888876 8899999999999865 1 11111100 011 24467899999 6654 4
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
.+...+.|..+|.++++........ ...++.+++.+++ +++++.+.
T Consensus 144 sgs~d~~i~iwd~~~~~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~----------------------------- 190 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQQVVLSSYRAH----AAQVTCVAASPHKDSVFLSCSE----------------------------- 190 (344)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECSSCTTEEEEEET-----------------------------
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCc----CCceEEEEecCCCCCceeeecc-----------------------------
Confidence 5555566899999887653322111 2346788888887 56665432
Q ss_pred cCCCCeEEEEeCCCCeEEEecc-c--CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEE
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLR-N--LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRT 302 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~-~--~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~ 302 (406)
+|.|..+|..+++...... . ......+++++++..++++....+.|..+++...+. ...+..-.+....+++
T Consensus 191 ---D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 191 ---DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVF 265 (344)
T ss_dssp ---TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEE
T ss_pred ---ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEE
Confidence 4679999988876543321 1 123467888887666666666667888888753211 1112111111234677
Q ss_pred CCCCC-EEEEEc
Q 015463 303 NEKGE-FWVAIH 313 (406)
Q Consensus 303 d~~G~-lwv~~~ 313 (406)
.++|. +.++..
T Consensus 266 sp~g~~~lasgs 277 (344)
T 4gqb_B 266 SPHSVPFLASLS 277 (344)
T ss_dssp CSSSSCCEEEEE
T ss_pred ccCCCeEEEEEe
Confidence 88875 444433
No 149
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.41 E-value=0.00034 Score=64.49 Aligned_cols=156 Identities=10% Similarity=0.057 Sum_probs=101.7
Q ss_pred cccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-E
Q 015463 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-L 145 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L 145 (406)
.-....++++.++|+.+.++..+|.|..|+....+...... ........+.+.+ +++ |
T Consensus 64 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l 122 (312)
T 4ery_A 64 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK--------------------GHSNYVFCCNFNP-QSNLI 122 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEE
T ss_pred CCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc--------------------CCCCCEEEEEEcC-CCCEE
Confidence 33456789999999989999999999999876211111110 0123356788988 555 4
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
+.+...+.|..+|.++++........ ...+..+++.++|++.++.+.
T Consensus 123 ~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~----------------------------- 169 (312)
T 4ery_A 123 VSGSFDESVRIWDVKTGKCLKTLPAH----SDPVSAVHFNRDGSLIVSSSY----------------------------- 169 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------------------
T ss_pred EEEeCCCcEEEEECCCCEEEEEecCC----CCcEEEEEEcCCCCEEEEEeC-----------------------------
Confidence 55555567999998876543221111 124677889999987776532
Q ss_pred cCCCCeEEEEeCCCCeEEE-eccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 226 TKDTGRVLKYDPTTKQTTV-LLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~-~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
+|.+..||..+++... +... ......++++++++.++.+. ..+.|..|++.
T Consensus 170 ---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 222 (312)
T 4ery_A 170 ---DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDYS 222 (312)
T ss_dssp ---TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-TTTEEEEEETT
T ss_pred ---CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECC
Confidence 4779999988776433 2222 22345688999999776654 46788888875
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.41 E-value=0.0001 Score=70.95 Aligned_cols=180 Identities=13% Similarity=0.071 Sum_probs=107.5
Q ss_pred EEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEEeCCCc
Q 015463 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIADAYFG 153 (406)
Q Consensus 75 ~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Vad~~~g 153 (406)
++.++|+.+.+++.+|.|..|+.......... ....+....+++.+ +++ |+.+...+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------------------~~h~~~v~~~~~~~-~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREID--------------------QAHVSEITKLKFFP-SGEALISSSQDMQ 162 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEET--------------------TSSSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeec--------------------ccccCccEEEEECC-CCCEEEEEeCCCe
Confidence 56788988889999999999987622222111 01134567899998 555 555655567
Q ss_pred EEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEE
Q 015463 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVL 233 (406)
Q Consensus 154 l~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~ 233 (406)
|..+|.++++....... ....+.++++.++|+..++.+. +|.+.
T Consensus 163 i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~--------------------------------d~~v~ 206 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTLIG----HRATVTDIAIIDRGRNVLSASL--------------------------------DGTIR 206 (420)
T ss_dssp EEEEETTTCCCCEEEEC----CSSCEEEEEEETTTTEEEEEET--------------------------------TSCEE
T ss_pred EEEEeCCCCcCceEEcC----CCCcEEEEEEcCCCCEEEEEcC--------------------------------CCcEE
Confidence 89999876643221111 1234678899999987776432 36688
Q ss_pred EEeCCCCeEEEecccC-------------------------CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCccee
Q 015463 234 KYDPTTKQTTVLLRNL-------------------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLE 288 (406)
Q Consensus 234 ~~d~~t~~~~~~~~~~-------------------------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~ 288 (406)
.||..+++........ .....++++++++.++.. +..+.|..+++...+ ...
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~--~~~ 283 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG-HVSGVITVHNVFSKE--QTI 283 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE-ETTSCEEEEETTTCC--EEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE-cCCCeEEEEECCCCc--eeE
Confidence 8888877654433211 122345667888776555 446788888875321 111
Q ss_pred eee-cCCCCCCceEECCCCC-EEEEEcc
Q 015463 289 AFA-ILPGYPDNVRTNEKGE-FWVAIHC 314 (406)
Q Consensus 289 ~~~-~l~g~pd~i~~d~~G~-lwv~~~~ 314 (406)
.+. ...+....++++++|. +.++...
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 111 1122234577888887 5554433
No 151
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.40 E-value=0.00026 Score=67.97 Aligned_cols=189 Identities=11% Similarity=-0.026 Sum_probs=116.6
Q ss_pred cccCcceEEEcC-CCCeeEEEecCCEEEEEeCC-c-e-----eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 67 QIQGPESMAFDP-LGRGPYTGVADGRILFWDGL-K-W-----TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 67 ~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
.-....++++.+ +++.+.+++.+|.|..|+.. . . .... ........+..+++
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~--------------------~~~~h~~~v~~~~~ 139 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI--------------------TLEGHTKRVGIVAW 139 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE--------------------EEECCSSCEEEEEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE--------------------EecCCCCeEEEEEE
Confidence 334557899998 88889999999999999865 1 1 0000 01111345678999
Q ss_pred eCCCC-c-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 139 DKKTG-D-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 139 d~~~g-~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
.+ ++ + |+.+...+.|..+|.++++....... .+ ....+.++++.++|+++++.+.
T Consensus 140 ~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-------------------- 196 (402)
T 2aq5_A 140 HP-TAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DV-HPDTIYSVDWSRDGALICTSCR-------------------- 196 (402)
T ss_dssp CS-SBTTEEEEEETTSCEEEEETTTTEEEEEECT-TT-CCSCEEEEEECTTSSCEEEEET--------------------
T ss_pred Cc-CCCCEEEEEcCCCEEEEEECCCCCccEEEec-CC-CCCceEEEEECCCCCEEEEEec--------------------
Confidence 98 54 4 55555556799999888764432210 01 1234678999999976666432
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEec-ccCC--CcceEEEecCCCEEEEEe--CCCCeEEEEEeeCCCCcceeeee
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RNLQ--FPNGLSLSKDKSFFVFCE--GSVGRLHKYWLIGEKAGNLEAFA 291 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~--~~ngi~l~~d~~~l~v~~--t~~~~i~~~~~~g~~~~~~~~~~ 291 (406)
+|.|..||..+++..... .... ....+++++|++.++... ...+.|..+++...+... ....
T Consensus 197 ------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-~~~~ 263 (402)
T 2aq5_A 197 ------------DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-SLQE 263 (402)
T ss_dssp ------------TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-EEEE
T ss_pred ------------CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-eEEe
Confidence 478999999888765433 2322 256789999987655442 446788888876432111 1111
Q ss_pred -cCCCCCCceEECCCCCEEEE
Q 015463 292 -ILPGYPDNVRTNEKGEFWVA 311 (406)
Q Consensus 292 -~l~g~pd~i~~d~~G~lwv~ 311 (406)
+.......++++++|++.+.
T Consensus 264 ~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 264 LDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp CCCCSSCEEEEEETTTTEEEE
T ss_pred ccCCCceeEEEEcCCCCEEEE
Confidence 12223456778888886543
No 152
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.40 E-value=0.0003 Score=65.58 Aligned_cols=193 Identities=10% Similarity=0.016 Sum_probs=114.0
Q ss_pred cCcccCcceEEEcCCC-CeeEEEecCCEEEEEeCC--c--e-eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 65 LNQIQGPESMAFDPLG-RGPYTGVADGRILFWDGL--K--W-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g-~~ly~g~~~g~I~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
.+.-....++++.+++ +.+.+++.|+.|..|+.. . . ..+.... ........+++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~--------------------~h~~~v~~~~~ 73 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK--------------------GHSHIVQDCTL 73 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE--------------------CCSSCEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe--------------------CCcccEEEEEE
Confidence 4444456788888754 778999999999988753 1 1 1111110 11233567889
Q ss_pred eCCCCc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 139 DKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 139 d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
.+ +++ |..+...+.|..+|.++++........ ...+.++++.++|.+.++.+.
T Consensus 74 s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~--------------------- 127 (319)
T 3frx_A 74 TA-DGAYALSASWDKTLRLWDVATGETYQRFVGH----KSDVMSVDIDKKASMIISGSR--------------------- 127 (319)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTTTEEEEEEECC----SSCEEEEEECTTSCEEEEEET---------------------
T ss_pred CC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccC----CCcEEEEEEcCCCCEEEEEeC---------------------
Confidence 98 565 455555567889999887643221111 124678899999988777542
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCC-----EEEEEeCCCCeEEEEEeeCCCCcceeeeec
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKS-----FFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 292 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~-----~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~ 292 (406)
++.+..+|.++.....+.........+++.+.+. ..+++....+.|..+++... +....
T Consensus 128 -----------D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-----~~~~~ 191 (319)
T 3frx_A 128 -----------DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-----QIEAD 191 (319)
T ss_dssp -----------TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-----EEEEE
T ss_pred -----------CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-----hhhee
Confidence 4668888887655555443333445677776432 23445455677888876531 11111
Q ss_pred CCCC---CCceEECCCCCEEEEEccCCcch
Q 015463 293 LPGY---PDNVRTNEKGEFWVAIHCRRSLY 319 (406)
Q Consensus 293 l~g~---pd~i~~d~~G~lwv~~~~~~~~~ 319 (406)
+.+. ...++++++|++.++......+.
T Consensus 192 ~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 192 FIGHNSNINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp ECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 2222 23467788998777665544443
No 153
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.40 E-value=0.00026 Score=68.16 Aligned_cols=181 Identities=10% Similarity=-0.003 Sum_probs=116.0
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
..++++.++|+.+++++.+|.|..|+........... ........+.++ +..++.+..
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~~v~~~~~~--~~~l~~~~~ 194 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA--------------------GHQARVGCLSWN--RHVLSSGSR 194 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEEE--TTEEEEEET
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec--------------------CCCCceEEEEEC--CCEEEEEcC
Confidence 4688999999988999999999999876211111111 112345677786 356777777
Q ss_pred CCcEEEEeCCCCe--EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 151 YFGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 151 ~~gl~~~d~~~~~--~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
.+.|..+|..... ...+... ...+.++++.++|++.++.+.
T Consensus 195 dg~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~-------------------------------- 237 (401)
T 4aez_A 195 SGAIHHHDVRIANHQIGTLQGH-----SSEVCGLAWRSDGLQLASGGN-------------------------------- 237 (401)
T ss_dssp TSEEEEEETTSSSCEEEEEECC-----SSCEEEEEECTTSSEEEEEET--------------------------------
T ss_pred CCCEEEEecccCcceeeEEcCC-----CCCeeEEEEcCCCCEEEEEeC--------------------------------
Confidence 7778899987332 2222111 234678899999987776532
Q ss_pred CCeEEEEeCCCCeEEEec-ccCCCcceEEEecCCCEEEEEeC--CCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCC
Q 015463 229 TGRVLKYDPTTKQTTVLL-RNLQFPNGLSLSKDKSFFVFCEG--SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK 305 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l~~d~~~l~v~~t--~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~ 305 (406)
+|.|..||..+++..... ........+++++++..++++.. ..+.|..+++...+ ....+ ...+....++++++
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~--~~~~~-~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA--RVNTV-DAGSQVTSLIWSPH 314 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--EEEEE-ECSSCEEEEEECSS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--EEEEE-eCCCcEEEEEECCC
Confidence 377999999877654433 33344578999998887877754 46788888875321 11111 22233456778888
Q ss_pred CCEEEEEc
Q 015463 306 GEFWVAIH 313 (406)
Q Consensus 306 G~lwv~~~ 313 (406)
|.+.++..
T Consensus 315 ~~~l~~~~ 322 (401)
T 4aez_A 315 SKEIMSTH 322 (401)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEe
Confidence 88766643
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.39 E-value=3.6e-05 Score=69.60 Aligned_cols=182 Identities=11% Similarity=0.024 Sum_probs=110.2
Q ss_pred CcceEEEcCCCCeeEEEec----CCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 70 GPESMAFDPLGRGPYTGVA----DGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~----~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
.+.++++.++|+.++++.. ...|+.++.. ..+.+. . ......+++.+ ++
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~sp-dg 140 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT-----------------------K-NLPSYWHGWSP-DG 140 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC-----------------------S-SSSEEEEEECT-TS
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee-----------------------c-CCCccceEECC-CC
Confidence 4467899999997777662 4678888764 211110 0 12256678988 55
Q ss_pred c-EEEEe-CCC--cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCC
Q 015463 144 D-LYIAD-AYF--GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 144 ~-L~Vad-~~~--gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
+ |+++. ... .|+.++.++++...+... ...+.+++++++|+ ++++...
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~---------------------- 193 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDSGVETRLTHG-----EGRNDGPDYSPDGRWIYFNSSR---------------------- 193 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCS-----SSCEEEEEECTTSSEEEEEECT----------------------
T ss_pred CEEEEEECCCCceEEEEEECCCCcceEcccC-----CCccccceECCCCCEEEEEecC----------------------
Confidence 5 55333 333 478888877766554322 12457789999997 5555421
Q ss_pred CCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCC----------CCeEEEEEeeCCCCccee
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS----------VGRLHKYWLIGEKAGNLE 288 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~----------~~~i~~~~~~g~~~~~~~ 288 (406)
....+|+.++..++....+.........+++++|++.++++... ...|+.+++++.+.....
T Consensus 194 --------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 194 --------TGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp --------TSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred --------CCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 12356899987777776665443445578899999988776542 246888887643221111
Q ss_pred eeecCCCCCCceEECCCCCEEEE
Q 015463 289 AFAILPGYPDNVRTNEKGEFWVA 311 (406)
Q Consensus 289 ~~~~l~g~pd~i~~d~~G~lwv~ 311 (406)
.+....+....+.++++|+..+.
T Consensus 266 ~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 266 DLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EEEESTTTSCSCCBCTTSSEEEE
T ss_pred ccCCCCcccccceECCCCCEEEE
Confidence 11122334566788899984433
No 155
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.39 E-value=0.00012 Score=70.40 Aligned_cols=188 Identities=9% Similarity=-0.060 Sum_probs=116.1
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Va 148 (406)
..++.+ +++.+++++.+|.|..|+.. .-....... ...+...++++.+ +++ |.++
T Consensus 179 v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l~s~ 235 (401)
T 4aez_A 179 VGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ--------------------GHSSEVCGLAWRS-DGLQLASG 235 (401)
T ss_dssp EEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEE--------------------CCSSCEEEEEECT-TSSEEEEE
T ss_pred eEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEc--------------------CCCCCeeEEEEcC-CCCEEEEE
Confidence 345566 45668899999999999865 211111110 1124467899998 554 5566
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
...+.|..+|..+++....... ....+.++++.++| .++++.+ +.
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~------------------------------gs 281 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLATGG------------------------------GT 281 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEEEEC------------------------------CT
T ss_pred eCCCeEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEEEec------------------------------CC
Confidence 6567799999887654322111 12347789999977 5666542 11
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEe-CCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECCCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCE-GSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKG 306 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~-t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~G 306 (406)
.+|.|..||..+++.............++++++++.++.+. ...+.|..|++..........+..-.+....++++++|
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 24789999998887655444445567899999999887763 34678888887642111111111122335567889999
Q ss_pred CEEEEEccC
Q 015463 307 EFWVAIHCR 315 (406)
Q Consensus 307 ~lwv~~~~~ 315 (406)
.+.++....
T Consensus 362 ~~l~s~~~d 370 (401)
T 4aez_A 362 RILSTAASD 370 (401)
T ss_dssp SEEEEECTT
T ss_pred CEEEEEeCC
Confidence 866665443
No 156
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.38 E-value=0.00076 Score=64.76 Aligned_cols=153 Identities=14% Similarity=0.047 Sum_probs=97.9
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
..++++.++|+.+.++..+|.|..|+....+...... ........+++.+++..|+.+..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~--------------------~h~~~v~~~~~~p~~~~l~s~s~ 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ--------------------GHEQDIYSLDYFPSGDKLVSGSG 185 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--------------------cCCCCEEEEEEcCCCCEEEEecC
Confidence 3578999999988999999999999976222211111 01234678899983334555555
Q ss_pred CCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCC
Q 015463 151 YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDT 229 (406)
Q Consensus 151 ~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 229 (406)
.+.|..+|..+++....... ...+..+++.+ +|++.++.+. +
T Consensus 186 d~~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~--------------------------------d 228 (393)
T 1erj_A 186 DRTVRIWDLRTGQCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSL--------------------------------D 228 (393)
T ss_dssp TSEEEEEETTTTEEEEEEEC-----SSCEEEEEECSTTCCEEEEEET--------------------------------T
T ss_pred CCcEEEEECCCCeeEEEEEc-----CCCcEEEEEECCCCCEEEEEcC--------------------------------C
Confidence 56788999988765432221 12356778887 7877766432 4
Q ss_pred CeEEEEeCCCCeEEEecc-------c-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 230 GRVLKYDPTTKQTTVLLR-------N-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~-------~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
|.+..||..+++...... + ......+++++|++.++.. ...+.|..+++..
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~ 287 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQN 287 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC--
T ss_pred CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCC
Confidence 678888988776433221 1 1234578999999877554 4467888888753
No 157
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.38 E-value=9.2e-05 Score=71.24 Aligned_cols=191 Identities=11% Similarity=0.053 Sum_probs=117.5
Q ss_pred ccCcceEEEcCCC-CeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 68 IQGPESMAFDPLG-RGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 68 ~~gpe~i~~d~~g-~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
-....++++.++| +.++++..+|.|..|+...-....... .....+....+++++++..|+
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG------------------PDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC------------------TTTCCSCEEEEEECTTSSCEE
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe------------------cCCCCCceEEEEECCCCCEEE
Confidence 3455788999997 678899999999999976222221110 001124467899998333466
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
++...+.|..+|.++++...... .+.....+..+++.++|.++++..+ .
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~~-----------------------------~ 241 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKD--RPHEGTRPVHAVFVSEGKILTTGFS-----------------------------R 241 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE--CSSCSSSCCEEEECSTTEEEEEEEC-----------------------------T
T ss_pred EEecCCcEEEEeCCCCceeeeec--cCCCCCcceEEEEcCCCcEEEEecc-----------------------------C
Confidence 66666779999998876433221 1111123677889999987776521 1
Q ss_pred CCCCeEEEEeCCCCeE--EEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec--CCCCCCceE
Q 015463 227 KDTGRVLKYDPTTKQT--TVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI--LPGYPDNVR 301 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~--~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~--l~g~pd~i~ 301 (406)
..++.|..||..+++. ... .........+++++|++.++++....+.|..|++...+. ....+.. ..+...+++
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~ 320 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMG 320 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEE
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCcccceE
Confidence 2247799999876542 111 223344567899999999988876678899998874321 0112221 123455667
Q ss_pred ECCCCCE
Q 015463 302 TNEKGEF 308 (406)
Q Consensus 302 ~d~~G~l 308 (406)
+.++|.+
T Consensus 321 ~sp~~~~ 327 (402)
T 2aq5_A 321 YMPKRGL 327 (402)
T ss_dssp ECCGGGS
T ss_pred Eeccccc
Confidence 7666654
No 158
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.37 E-value=2.1e-05 Score=76.94 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=115.1
Q ss_pred cceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 71 PESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 71 pe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..++++.| ++++|.+|+.+|.|..|+.. ....+... ..+ .+...+|+|.+.++++++
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-------------------~gH-~~~V~~l~f~p~~~~~l~ 181 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-------------------IGA-GGSITGLKFNPLNTNQFY 181 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-------------------CSS-SCCCCEEEECSSCTTEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-------------------cCC-CCCEEEEEEeCCCCCEEE
Confidence 45789987 56678899999999999865 21111110 011 244678999874565554
Q ss_pred E-eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 148 A-DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 148 a-d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
+ ...+.|..+|.+++....+.... .....+..++++++|.+.++.+.
T Consensus 182 s~s~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~------------------------------ 229 (435)
T 4e54_B 182 ASSMEGTTRLQDFKGNILRVFASSD--TINIWFCSLDVSASSRMVVTGDN------------------------------ 229 (435)
T ss_dssp EECSSSCEEEEETTSCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECS------------------------------
T ss_pred EEeCCCEEEEeeccCCceeEEeccC--CCCccEEEEEECCCCCEEEEEeC------------------------------
Confidence 4 44456888999887665543321 11234567889999987776532
Q ss_pred CCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCC---CceEEC
Q 015463 227 KDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYP---DNVRTN 303 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~p---d~i~~d 303 (406)
+|.|..+|.+++....+.......+.++++|+++.++++....+.|..+++...+.. ..+....+.. ..++++
T Consensus 230 --dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~s 305 (435)
T 4e54_B 230 --VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK--ASFLYSLPHRHPVNAACFS 305 (435)
T ss_dssp --SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS--SCCSBCCBCSSCEEECCBC
T ss_pred --CCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc--ceEEEeeeccccccceeEC
Confidence 477889998765544333222345688999998877766655677777876532111 1111111222 234567
Q ss_pred CCCCEEEEEccCCc
Q 015463 304 EKGEFWVAIHCRRS 317 (406)
Q Consensus 304 ~~G~lwv~~~~~~~ 317 (406)
++|++.++......
T Consensus 306 pdg~~l~s~~~D~~ 319 (435)
T 4e54_B 306 PDGARLLTTDQKSE 319 (435)
T ss_dssp TTSSEEEEEESSSC
T ss_pred CCCCeeEEEcCCCE
Confidence 78876665544333
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.34 E-value=0.00013 Score=75.61 Aligned_cols=212 Identities=13% Similarity=-0.009 Sum_probs=109.7
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
..+.++++++++. +.++ .++.|+.++.. ....+... .+.+..+++++ +|+..
T Consensus 82 ~~v~~~~~spd~~-~~~~-~~~~i~~~d~~~~~~~~l~~~-----------------------~~~~~~~~~Sp-dG~~l 135 (706)
T 2z3z_A 82 FPSFRTLDAGRGL-VVLF-TQGGLVGFDMLARKVTYLFDT-----------------------NEETASLDFSP-VGDRV 135 (706)
T ss_dssp CCCEEEEETTTTE-EEEE-ETTEEEEEETTTTEEEEEECC-----------------------TTCCTTCEECT-TSSEE
T ss_pred cCceeEEECCCCe-EEEE-ECCEEEEEECCCCceEEccCC-----------------------cccccCCcCCC-CCCEE
Confidence 4578899999944 3333 46899999976 22222111 12244568888 66543
Q ss_pred EEeCCCcEEEEeCCC-----CeEEEcccccCCc----------ccccccceEEcCCCCEEEEeCCCchhhhccc-----c
Q 015463 147 IADAYFGLMKVGPEG-----GLATSLATEAEGV----------PLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQ-----K 206 (406)
Q Consensus 147 Vad~~~gl~~~d~~~-----~~~~~l~~~~~~~----------~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~-----~ 206 (406)
+....+.|+.++.++ ++...+....... .+..+.++++.+||+..+..+........+. .
T Consensus 136 a~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 136 AYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp EEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCS
T ss_pred EEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCC
Confidence 333456799999887 7655443221110 1122578899999964433210000000000 0
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccC---CCcceEEEecCCCEEEEEeCCC----CeEEEEEe
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNL---QFPNGLSLSKDKSFFVFCEGSV----GRLHKYWL 279 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~---~~~ngi~l~~d~~~l~v~~t~~----~~i~~~~~ 279 (406)
........ .-...+ .......|+.+|.++++...+.... .....++++||++.++++.... ..|+.+++
T Consensus 216 ~~~~~~~~-~y~~~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 216 LEAESKPL-YYPMAG---TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp SSCEEEEE-CCCBTT---SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred CCCceEEe-eCCCCC---CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 00000000 000000 0112356999999988876654321 2345789999999888765432 37788876
Q ss_pred eCCCCcceeeee-c-CCC---CCCceEECC--CCCEEEEE
Q 015463 280 IGEKAGNLEAFA-I-LPG---YPDNVRTNE--KGEFWVAI 312 (406)
Q Consensus 280 ~g~~~~~~~~~~-~-l~g---~pd~i~~d~--~G~lwv~~ 312 (406)
.+.+ ....+. . ... ....+++++ +|++.++.
T Consensus 292 ~~g~--~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 292 ETGR--FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp TTCC--EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred CCCc--eeeEEEEccCCCeECccCCceeecCCCCEEEEEE
Confidence 5321 222221 1 111 124678888 88844433
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.33 E-value=6.8e-06 Score=83.57 Aligned_cols=142 Identities=11% Similarity=-0.056 Sum_probs=89.9
Q ss_pred EEeCC-CCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 137 RFDKK-TGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 137 ~~d~~-~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.++ ++.++++....++..+|.++++.+.+.... . .++++++||+.+++.+..
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~------~-~~~~~spDG~~la~~~~~------------------ 170 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP------G-FGFVSDIRGDLIAGLGFF------------------ 170 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES------S-CEEEEEEETTEEEEEEEE------------------
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC------C-ceEEECCCCCEEEEEEEc------------------
Confidence 44442 344666666667778898888776654321 1 678899999876644320
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeCCCCcceeeeecCC
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFAILP 294 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g~~~~~~~~~~~l~ 294 (406)
....+.|+.+|.++++.+.+.......+.+++||||+.++.++..+ ..|+++++++. ....+....
T Consensus 171 ----------~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~ 237 (582)
T 3o4h_A 171 ----------GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG---SVEDLELPS 237 (582)
T ss_dssp ----------ETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC---CEEECCCSC
T ss_pred ----------CCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC---cEEEccCCC
Confidence 1112459999999898887765544457899999999998665432 27888887643 222222212
Q ss_pred CCCCceE--------ECCCCCEEEEEccCC
Q 015463 295 GYPDNVR--------TNEKGEFWVAIHCRR 316 (406)
Q Consensus 295 g~pd~i~--------~d~~G~lwv~~~~~~ 316 (406)
+.+.+++ .++||.++++.....
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 2223445 889998877765443
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.33 E-value=6.3e-05 Score=78.09 Aligned_cols=146 Identities=12% Similarity=0.103 Sum_probs=88.9
Q ss_pred cceEEEEeCCCCc-EEEEeCCC-----cEEEEeCCCC-eEEEcccccCCcccccccceEEcC--CCCEEEEeCCCchhhh
Q 015463 132 RPLGLRFDKKTGD-LYIADAYF-----GLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRR 202 (406)
Q Consensus 132 ~p~gi~~d~~~g~-L~Vad~~~-----gl~~~d~~~~-~~~~l~~~~~~~~~~~~~~l~~d~--dG~ly~t~~~~~~~~~ 202 (406)
.+..+++.+ +|+ |+++.... .|+.+|.+++ ..+.+...........++++++.+ ||+++++...
T Consensus 259 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~------ 331 (706)
T 2z3z_A 259 FLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR------ 331 (706)
T ss_dssp EEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT------
T ss_pred eEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc------
Confidence 356789998 665 66654433 6899999988 555543221111112246788988 9976555421
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcce-EEEecCCCEEEEEeCCCC----eEEEE
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNG-LSLSKDKSFFVFCEGSVG----RLHKY 277 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ng-i~l~~d~~~l~v~~t~~~----~i~~~ 277 (406)
.+..+|+.++.+++..+.+..+...... +++++|++.++++....+ .|+++
T Consensus 332 ------------------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 332 ------------------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp ------------------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred ------------------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 1235699999776666666543333334 789999999988876544 78888
Q ss_pred EeeCCCCcceeeeecCCCCCCceEECCCCCEEEEE
Q 015463 278 WLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 278 ~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~ 312 (406)
++++.. .+.+... +....++++++|+.++..
T Consensus 388 d~~~~~---~~~l~~~-~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 388 DIKGGK---TKDLTPE-SGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp ETTCCC---CEESCCS-SSEEEEEECTTSSEEEEE
T ss_pred EcCCCC---ceeccCC-CceEEEEECCCCCEEEEE
Confidence 865422 2222211 113356778888865544
No 162
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.33 E-value=0.00041 Score=72.86 Aligned_cols=192 Identities=9% Similarity=0.032 Sum_probs=116.6
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+.-....+++++++|..+.++..+|.|..|+........... ...+....+++++++..
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~--------------------~~~~~v~~~~~s~~~~~ 69 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--------------------VTETPVRAGKFIARKNW 69 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEEEGGGTE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe--------------------cCCCcEEEEEEeCCCCE
Confidence 4444567899999999988999999999999965211111111 01244678999993334
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
|.++...+.|..+|.++++........ ...+..+++.++|...++.+.
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~---------------------------- 117 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSD---------------------------- 117 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEET----------------------------
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecC----CCCEEEEEEeCCCCEEEEEcC----------------------------
Confidence 666666667899998877543222211 134778899999976555322
Q ss_pred ccCCCCeEEEEeCCCC-eEEEecc-cCCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCce
Q 015463 225 ITKDTGRVLKYDPTTK-QTTVLLR-NLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNV 300 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~-~~~~~~~-~~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i 300 (406)
+|.+..||.+++ ....... .-.....++++| |++.++.+ +..+.|..+++...... ..+. ...+....+
T Consensus 118 ----dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~ 190 (814)
T 3mkq_A 118 ----DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG-CLDRTVKVWSLGQSTPN--FTLTTGQERGVNYV 190 (814)
T ss_dssp ----TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE-ETTSEEEEEETTCSSCS--EEEECCCTTCCCEE
T ss_pred ----CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcce--eEEecCCCCCEEEE
Confidence 377888888766 3333332 223456789999 66655444 45678888887532211 1111 111234456
Q ss_pred EECC--CCCEEEEEccC
Q 015463 301 RTNE--KGEFWVAIHCR 315 (406)
Q Consensus 301 ~~d~--~G~lwv~~~~~ 315 (406)
+..+ +|.+.++....
T Consensus 191 ~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 191 DYYPLPDKPYMITASDD 207 (814)
T ss_dssp EECCSTTCCEEEEECTT
T ss_pred EEEECCCCCEEEEEeCC
Confidence 6666 77766555443
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.33 E-value=0.0001 Score=70.11 Aligned_cols=200 Identities=16% Similarity=0.067 Sum_probs=109.6
Q ss_pred EEEcCCCCeeEEEec-CC--EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 74 MAFDPLGRGPYTGVA-DG--RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 74 i~~d~~g~~ly~g~~-~g--~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
.++.+||+.+++... +| .|+.++.+ ..+.+... ......+.++++++..|+.+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~----------------------~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG----------------------RGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS----------------------SCBCSSSCEECTTSSEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC----------------------CCCCccceEEcCCCCEEEEE
Confidence 567889986655554 55 58888876 22222110 01112245788844457777
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccc--ccccccccCCCCCCCccc
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKEN--IPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~ 226 (406)
.....|+++|.++++.+.+.....+. ........+++|...++...... ++.... ..+....+ .
T Consensus 99 ~~~~~l~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~---~~~~~~~~~~~~~~~~---------~ 164 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEENVVYQVPAEW--VGYGTWVANSDCTKLVGIEIRRE---DWVPLTDWKKFHEFYF---------T 164 (388)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGG---GCCCCCSHHHHHHHGG---------G
T ss_pred eCCCeEEEEECCCCcceeeeechhhc--ccccceeECCCCCeeccccccCc---ccccccccchhhhhhc---------c
Confidence 66668999999988766544321111 11112345788877765321000 000000 00000111 2
Q ss_pred CCCCeEEEEeCCCCeEEEecccCCCcceEEEec-CCCEEEEEeCC-----CCeEEEEEeeCCCCcceeeeecCC-C-CCC
Q 015463 227 KDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGS-----VGRLHKYWLIGEKAGNLEAFAILP-G-YPD 298 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~-d~~~l~v~~t~-----~~~i~~~~~~g~~~~~~~~~~~l~-g-~pd 298 (406)
.....|+.+|.++++.+.+.........++++| |++.+.++... ..+|+.++.++... ..+.... + ...
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGESCT 241 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTEEEE
T ss_pred CCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCcccc
Confidence 234679999999998887765555567899999 99887666543 34899988765321 2221111 0 112
Q ss_pred ceEECCCCC-E-EEEE
Q 015463 299 NVRTNEKGE-F-WVAI 312 (406)
Q Consensus 299 ~i~~d~~G~-l-wv~~ 312 (406)
..+.++||+ | |++.
T Consensus 242 ~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEECTTSSCEEEEEE
T ss_pred cceECCCCCEEEEEec
Confidence 346788887 4 4444
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.32 E-value=0.00032 Score=71.26 Aligned_cols=175 Identities=10% Similarity=-0.008 Sum_probs=110.1
Q ss_pred CeeEEE-ecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEEeC
Q 015463 81 RGPYTG-VADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGP 159 (406)
Q Consensus 81 ~~ly~g-~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~d~ 159 (406)
+.+|+. ..++.|..+|....+.+.... ....|++++++++...+||++..+.|..+|.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~---------------------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLD---------------------TGYAVHISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE---------------------CSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEe---------------------CCCCccceEECCCCCEEEEEcCCCeEEEEEC
Confidence 345554 456899999987222221111 1345889999995456899987778999998
Q ss_pred C--CCeEEEcccccCCcccccccceEEc----CCC-CEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeE
Q 015463 160 E--GGLATSLATEAEGVPLRFTNDLDID----DEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRV 232 (406)
Q Consensus 160 ~--~~~~~~l~~~~~~~~~~~~~~l~~d----~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l 232 (406)
. +.+... ....+ ..|.+++++ +|| .+|+++.. .+.+
T Consensus 226 ~~~t~~~v~--~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~--------------------------------~~~v 268 (567)
T 1qks_A 226 WMKEPTTVA--EIKIG---SEARSIETSKMEGWEDKYAIAGAYW--------------------------------PPQY 268 (567)
T ss_dssp TSSSCCEEE--EEECC---SEEEEEEECCSTTCTTTEEEEEEEE--------------------------------TTEE
T ss_pred CCCCCcEeE--EEecC---CCCceeEEccccCCCCCEEEEEEcc--------------------------------CCeE
Confidence 5 543321 11112 247899999 588 57777632 3678
Q ss_pred EEEeCCCCeEEEecc--cC----------CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeee-ecCCCCCCc
Q 015463 233 LKYDPTTKQTTVLLR--NL----------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF-AILPGYPDN 299 (406)
Q Consensus 233 ~~~d~~t~~~~~~~~--~~----------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~-~~l~g~pd~ 299 (406)
..+|..+.+...... +. ....++..++++..++++-...+.|+.++....+ ...+- .....+|.+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~--~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN--NLKTTEISAERFLHD 346 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS--EEEEEEEECCSSEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc--cceeeeeeccccccC
Confidence 889988876543321 10 1234677888888888887777899999865322 11111 122335778
Q ss_pred eEECCCCC-EEEEEccC
Q 015463 300 VRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 300 i~~d~~G~-lwv~~~~~ 315 (406)
+.+|++|+ +|++....
T Consensus 347 ~~~~pdgr~~~va~~~s 363 (567)
T 1qks_A 347 GGLDGSHRYFITAANAR 363 (567)
T ss_dssp EEECTTSCEEEEEEGGG
T ss_pred ceECCCCCEEEEEeCCC
Confidence 88999999 56666544
No 165
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.31 E-value=0.00081 Score=64.12 Aligned_cols=195 Identities=10% Similarity=0.033 Sum_probs=111.7
Q ss_pred cCcceEEEcCCCC-eeEEEecCCEEEEEeC----Ccee------EEEeecCCCccccCCCCCcccccccCCcCCcceEEE
Q 015463 69 QGPESMAFDPLGR-GPYTGVADGRILFWDG----LKWT------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (406)
Q Consensus 69 ~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 137 (406)
....++++.++|+ .+.+++.+|.|..|+. ..-. ........ ... ........+....++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP----FAL------SASSGKTTNQVTCLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC----CCC------C------CBCEEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc----ccc------cccccCCCCceEEEE
Confidence 4568999999999 8999999999999887 5111 11110000 000 000001133567899
Q ss_pred EeCCCCc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 138 FDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 138 ~d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
+.+ +++ |+++...+.|..++.++.....+... ...+.++++.++|+..++.+.
T Consensus 116 ~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~-------------------- 169 (425)
T 1r5m_A 116 WSH-DGNSIVTGVENGELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV-------------------- 169 (425)
T ss_dssp ECT-TSSEEEEEETTSCEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET--------------------
T ss_pred EcC-CCCEEEEEeCCCeEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec--------------------
Confidence 998 555 56666556688899665544443211 234778899999976665432
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEecccCC-C---------------cceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQ-F---------------PNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~-~---------------~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
+|.+..||..+++......... . ...+++++++. + ++....+.|..+++.
T Consensus 170 ------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 170 ------------ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-F-VIPGPKGAIFVYQIT 235 (425)
T ss_dssp ------------TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-E-EEECGGGCEEEEETT
T ss_pred ------------CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-E-EEEcCCCeEEEEEcC
Confidence 3678888888776544332211 1 56678888764 3 444556789999876
Q ss_pred CCCCcceeeeecCCCCCCceEECCCCCEEEEEccC
Q 015463 281 GEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 281 g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
..+. ...+..-.+....++++++|++.++....
T Consensus 236 ~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 236 EKTP--TGKLIGHHGPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp CSSC--SEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CCce--eeeeccCCCceEEEEECCCCCEEEEEcCC
Confidence 4211 11121112223456778888865554433
No 166
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.31 E-value=0.00012 Score=69.18 Aligned_cols=191 Identities=16% Similarity=0.094 Sum_probs=112.7
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
..++++.++|+.|.++..|+.|..|+.. .+....... .........+++++ +|+ |..
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~-------------------~~h~~~v~~~~~sp-~g~~l~s 78 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS-------------------EGHQRTVRKVAWSP-CGNYLAS 78 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC-------------------SSCSSCEEEEEECT-TSSEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec-------------------cccCCcEEEEEECC-CCCEEEE
Confidence 3578999999988899999999988754 211111000 01123467899999 565 455
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.+..++..++..+.+... .+ ....+.++++.++|++.++.+.
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~-~~-h~~~v~~v~~sp~~~~l~s~s~------------------------------- 125 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTL-EG-HENEVKSVAWAPSGNLLATCSR------------------------------- 125 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEE-CC-CSSCEEEEEECTTSSEEEEEET-------------------------------
T ss_pred EECCCcEEEEEccCCCeEEEEEc-cC-CCCCceEEEEeCCCCEEEEEEC-------------------------------
Confidence 55556677787766543322211 11 1234788999999988777532
Q ss_pred CCCeEEEEeCCCCeE----EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC---CCce
Q 015463 228 DTGRVLKYDPTTKQT----TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY---PDNV 300 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~----~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~---pd~i 300 (406)
++.+..+|..++.. ..+.........++++|+++.+..+. ..+.|..++.... .......+.+. ...+
T Consensus 126 -D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~---~~~~~~~~~~h~~~v~~l 200 (345)
T 3fm0_A 126 -DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEED---DWVCCATLEGHESTVWSL 200 (345)
T ss_dssp -TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETT---EEEEEEEECCCSSCEEEE
T ss_pred -CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCC---CEEEEEEecCCCCceEEE
Confidence 36677777665432 12222223456789999998765554 4567777776532 11111122222 3356
Q ss_pred EECCCCCEEEEEccCCcch
Q 015463 301 RTNEKGEFWVAIHCRRSLY 319 (406)
Q Consensus 301 ~~d~~G~lwv~~~~~~~~~ 319 (406)
+++++|++.++....+.+.
T Consensus 201 ~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 201 AFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EECTTSSEEEEEETTSCEE
T ss_pred EECCCCCEEEEEeCCCeEE
Confidence 7888888776655544443
No 167
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.31 E-value=1.3e-05 Score=80.82 Aligned_cols=257 Identities=14% Similarity=0.053 Sum_probs=141.6
Q ss_pred CCCeeEEEe-cCCEEEEEeCCcee--EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEe--CCCCcEEEEeC---
Q 015463 79 LGRGPYTGV-ADGRILFWDGLKWT--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD--KKTGDLYIADA--- 150 (406)
Q Consensus 79 ~g~~ly~g~-~~g~I~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d--~~~g~L~Vad~--- 150 (406)
||+.+|+.. .+++|.+++.+..+ .+... +....|.|+++. ++.+.+|+++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i---------------------p~g~~phg~~~~~~p~~~~v~~~~~~~~ 158 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEI---------------------PNAKGIHGLRPQKWPRSNYVFCNGEDET 158 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEEC---------------------SSCCSEEEEEECCSSBCSEEEEEECSCE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeC---------------------CCCCCCcceeeeecCCCcEEEEeccccc
Confidence 788788854 46789999988333 22111 113458999984 65677888842
Q ss_pred --------------C-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchh---------hhccc
Q 015463 151 --------------Y-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQ---------RRQMQ 205 (406)
Q Consensus 151 --------------~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~---------~~~~~ 205 (406)
+ +-+..+|.++.++.--. ...+ .|..+++++||. +|++...+... ..++.
T Consensus 159 p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI-~Vgg----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v 233 (595)
T 1fwx_A 159 PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQV-LVSG----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHI 233 (595)
T ss_dssp ESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEE-EESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEE
T ss_pred ccCCCCcccccccccCceEEEEECCCCeEEEEE-EeCC----CccceEECCCCCEEEEEecCcccCcchhhccccccceE
Confidence 1 24778888876543211 1112 477899999985 66665432110 00000
Q ss_pred ccc--ccccccccCCCCCCCcccCCCCeEEEEeCCC--CeE-EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 206 KEN--IPLQLCSSLNDPSPIKITKDTGRVLKYDPTT--KQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 206 ~~~--~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t--~~~-~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
.-. ........ +....++ +++-.+|..+ ++. .....--..|.|+.++|||+++|++......|..|+.+
T Consensus 234 ~V~~~~~~~~~v~--~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 234 VVFNIAEIEKAIA--AGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp EEEEHHHHHHHHH--HTCSEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred EEeeccceeEecc--CCCeeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 000 00000000 0001111 4599999987 433 22333335799999999999999999999999999987
Q ss_pred CCC------C-cceeeeec--CCCCCCceEECCCCCEEEEEccCCcchhhhhhcC-h-----hhhhhhhccCccceeeee
Q 015463 281 GEK------A-GNLEAFAI--LPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALY-P-----KIRHFLLKLPISAKTHYL 345 (406)
Q Consensus 281 g~~------~-~~~~~~~~--l~g~pd~i~~d~~G~lwv~~~~~~~~~~~~~~~~-~-----~~~~~~~~l~~~~~~~~~ 345 (406)
..+ . ....+... ..-.|..+++|++|++|++..-...+..+.+..- . ...+.+.+++....+-..
T Consensus 308 ~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~ 387 (595)
T 1fwx_A 308 RFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHL 387 (595)
T ss_dssp GHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEE
T ss_pred ccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccc
Confidence 311 0 11122322 2234889999999999999875544433222110 0 012344455443332111
Q ss_pred EeecCcceEEEEEECCCCCEEEEEECCC
Q 015463 346 IHVGGRLHAMAVKYSPEGKILQVLEDSK 373 (406)
Q Consensus 346 ~~~~~~~~~~v~~~d~~g~~~~~~~~~~ 373 (406)
.+. .-..++++|+.+.+....+
T Consensus 388 ~~~------~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 388 KTV------MGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp EET------TTTSTTCCSSEEEEEESCC
T ss_pred eec------cceEeCCCCCEEEEcCCCC
Confidence 111 1123478888888876433
No 168
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.30 E-value=0.00015 Score=69.87 Aligned_cols=211 Identities=12% Similarity=-0.014 Sum_probs=115.4
Q ss_pred cCcceEEEcCCCCeeEEEec--CCEEEEEeCCc---eeEEEeec-------CCC--ccccCCCC------Cccccc----
Q 015463 69 QGPESMAFDPLGRGPYTGVA--DGRILFWDGLK---WTDFAFTS-------NNR--SELCNPKP------IATSYL---- 124 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~--~g~I~~~~~~~---~~~~~~~~-------~~~--~~~~~~~~------~~~~~~---- 124 (406)
..|+.+++++||+.+|+... ++.|..+|... ...+.... ... -..|.... .+....
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~ 216 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 216 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEee
Confidence 36999999999999999864 57899999772 12221100 000 00111100 000000
Q ss_pred -ccCCcCCcceE--EEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEccccc--------CCcccccccceEEcCCC-CEEE
Q 015463 125 -KNEHICGRPLG--LRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATEA--------EGVPLRFTNDLDIDDEG-NVYF 192 (406)
Q Consensus 125 -~~~~~~~~p~g--i~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~--------~~~~~~~~~~l~~d~dG-~ly~ 192 (406)
.......+|.. ..++..+|+++..+..+.++.+|..++..+...... .+........+++++++ ++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV 296 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 296 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred cceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEE
Confidence 00001112221 245433676544444556888888766543322110 11111122346777765 7888
Q ss_pred EeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCC-EEEEEeCCC
Q 015463 193 TDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKS-FFVFCEGSV 271 (406)
Q Consensus 193 t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~-~l~v~~t~~ 271 (406)
+..... .+.+ ..+.+.|+.+|.+|+++.....--..++++++++|++ .||++....
T Consensus 297 ~~~~~~----~~~h-------------------k~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 297 LVDQRD----EWRH-------------------KTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp EEEECC----TTCT-------------------TSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTT
T ss_pred Eecccc----cccc-------------------CCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCC
Confidence 752100 0000 1123579999999998765543334678999999997 788877777
Q ss_pred CeEEEEEeeCCCCcceeeeecCCCCCCceEECCC
Q 015463 272 GRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEK 305 (406)
Q Consensus 272 ~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~~ 305 (406)
+.|..++... ++...-...++.|+.+.+..|
T Consensus 354 ~~VsViD~~t---~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 354 KTLYIHDAES---GEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp TEEEEEETTT---CCEEEEECCCCSSCCEEEECC
T ss_pred CeEEEEECCC---CcEEEEecCCCCCceeEECCc
Confidence 8999999652 322222346778888877654
No 169
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.30 E-value=6e-05 Score=71.53 Aligned_cols=186 Identities=12% Similarity=0.089 Sum_probs=110.4
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE-Ee
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI-AD 149 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V-ad 149 (406)
..++++.++|+.+.+++.+|.|..|+...-+.+..... + .+....+++.+++..+++ +.
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-------------------h-~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-------------------H-AAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------------------C-SSCEEEEEECSSCTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-------------------c-CCceEEEEecCCCCCceeeec
Confidence 46889999999899999999999999762222211110 1 244677889884445554 44
Q ss_pred CCCcEEEEeCCCCeEE-EcccccCCcccccccceEEcCC-CCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 150 AYFGLMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~-~l~~~~~~~~~~~~~~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
..+.|..+|..+++.. .+.... ....+..+++.++ ++++++.+
T Consensus 190 ~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~l~sg~-------------------------------- 234 (344)
T 4gqb_B 190 EDNRILLWDTRCPKPASQIGCSA---PGYLPTSLAWHPQQSEVFVFGD-------------------------------- 234 (344)
T ss_dssp TTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEE--------------------------------
T ss_pred cccccccccccccceeeeeecce---eeccceeeeecCCCCcceEEec--------------------------------
Confidence 4567889998876533 222111 1224667888875 46666532
Q ss_pred CCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC---CCceEEC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY---PDNVRTN 303 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~---pd~i~~d 303 (406)
.+|.|..||..+++......+ ....+.++++||+..++++....+.|..+++.. + +++. +.|. ...++++
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~--~~~~-~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---S--ELFR-SQAHRDFVRDATWS 308 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC---C--EEEE-ECCCSSCEEEEEEC
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC---C--cEEE-EcCCCCCEEEEEEe
Confidence 247788999887764332332 234478999999866656555567787777542 2 2221 2222 3456778
Q ss_pred CCCC-EEEEEccCCc
Q 015463 304 EKGE-FWVAIHCRRS 317 (406)
Q Consensus 304 ~~G~-lwv~~~~~~~ 317 (406)
++|. +.++....+.
T Consensus 309 p~~~~llas~s~D~~ 323 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQ 323 (344)
T ss_dssp SSSTTEEEEEETTSC
T ss_pred CCCCeEEEEEcCCCe
Confidence 8876 5554443433
No 170
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.30 E-value=8.3e-05 Score=69.23 Aligned_cols=187 Identities=11% Similarity=-0.027 Sum_probs=111.2
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~- 144 (406)
....++++.++|+.++++..+|.|..|+.. . ....... . ........+++.+ +++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~-------------------~-~~~~~v~~~~~~~-~~~~ 70 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS-------------------L-RYKHPLLCCNFID-NTDL 70 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE-------------------E-ECSSCEEEEEEEE-SSSE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee-------------------e-ecCCceEEEEECC-CCCc
Confidence 345788899999988999999999888754 2 1111110 0 1124467899998 566
Q ss_pred -EEEEeCCCcEEEEeC-CCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 145 -LYIADAYFGLMKVGP-EGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 145 -L~Vad~~~gl~~~d~-~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
|+++...+.|..+|. ++++...+... .....+.++++.+ +++.++.+.
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~-------------------------- 120 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAASW-------------------------- 120 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEEET--------------------------
T ss_pred EEEEEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEEcC--------------------------
Confidence 677776677999999 88876554321 0123467888888 766665432
Q ss_pred CcccCCCCeEEEEeCCC---------CeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC-CCCcceeeeec
Q 015463 223 IKITKDTGRVLKYDPTT---------KQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG-EKAGNLEAFAI 292 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t---------~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g-~~~~~~~~~~~ 292 (406)
+|.|..||..+ ++.......-.....+++++++ ++++ +..+.|..|++.. ...........
T Consensus 121 ------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~ 191 (342)
T 1yfq_A 121 ------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGTIEESG 191 (342)
T ss_dssp ------TSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCEEEECS
T ss_pred ------CCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccceeeecC
Confidence 36788887654 3211111222234577888766 4444 4467899998764 22111111112
Q ss_pred CCCCCCceEECC-CCCEEEEEccC
Q 015463 293 LPGYPDNVRTNE-KGEFWVAIHCR 315 (406)
Q Consensus 293 l~g~pd~i~~d~-~G~lwv~~~~~ 315 (406)
.......+++++ +|++.++....
T Consensus 192 ~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp CSSCEEEEEECSGGGCEEEEEETT
T ss_pred CCCceeEEEECCCCCCEEEEEecC
Confidence 233345677888 88866555443
No 171
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.29 E-value=0.0011 Score=61.53 Aligned_cols=187 Identities=10% Similarity=0.050 Sum_probs=111.4
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+.-....++++.++|+.+.+++.|+.|..|+...-+.+.... ...+....+++++ ++.
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~ 120 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV--------------------GHKSDVMSVDIDK-KAS 120 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECT-TSC
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc--------------------cCCCcEEEEEEcC-CCC
Confidence 3344455678899999988999999999999976222211111 0123467889998 555
Q ss_pred -EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC------CCCEEEEeCCCchhhhccccccccccccccC
Q 015463 145 -LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD------EGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 145 -L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~------dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
|..+...+.|..+|.++.....+... ...+..+.+.+ ++.+.++.+
T Consensus 121 ~l~s~s~D~~i~vwd~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~---------------------- 173 (319)
T 3frx_A 121 MIISGSRDKTIKVWTIKGQCLATLLGH-----NDWVSQVRVVPNEKADDDSVTIISAG---------------------- 173 (319)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCC-----SSCEEEEEECCC------CCEEEEEE----------------------
T ss_pred EEEEEeCCCeEEEEECCCCeEEEEecc-----CCcEEEEEEccCCCCCCCccEEEEEe----------------------
Confidence 45555556688899876655443221 12344555554 333444432
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY 296 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~ 296 (406)
.++.+..+|..+.+......+ ....+.++++||++.+..+. ..+.|..+++...+. ...+ .....
T Consensus 174 ----------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~-~dg~i~iwd~~~~~~--~~~~-~~~~~ 239 (319)
T 3frx_A 174 ----------NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG-KDGEIMLWNLAAKKA--MYTL-SAQDE 239 (319)
T ss_dssp ----------TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTTEE--EEEE-ECCSC
T ss_pred ----------CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCcE--EEEe-cCCCc
Confidence 247788999887765543333 23457899999998765544 457788888653211 1111 11222
Q ss_pred CCceEECCCCCEEEEEc
Q 015463 297 PDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 297 pd~i~~d~~G~lwv~~~ 313 (406)
...++++++|.+.++..
T Consensus 240 v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEEECSSSSEEEEEE
T ss_pred EEEEEEcCCCCEEEEEc
Confidence 34567888887655543
No 172
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.28 E-value=0.00057 Score=66.13 Aligned_cols=186 Identities=14% Similarity=0.110 Sum_probs=113.1
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Va 148 (406)
...+++++++|+.+.+++.+|.|..|+......+.... ........+++.+ +++ |..+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~--------------------~h~~~V~~v~~~p-~~~~l~s~ 210 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH--------------------GHDHNVSSVSIMP-NGDHIVSA 210 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC--------------------CCSSCEEEEEECS-SSSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc--------------------CCCCCEEEEEEeC-CCCEEEEE
Confidence 44788999999988999999999999876322221110 1123467889998 555 5555
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
...+.|..+|..++........ ....+..+...++|.+.++.+.
T Consensus 211 s~D~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~g~~l~s~s~-------------------------------- 254 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKTFTG----HREWVRMVRPNQDGTLIASCSN-------------------------------- 254 (410)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECTTSSEEEEEET--------------------------------
T ss_pred eCCCeEEEEECCCCcEEEEEeC----CCccEEEEEECCCCCEEEEEcC--------------------------------
Confidence 5556788999887754321111 1124677888999988777543
Q ss_pred CCeEEEEeCCCCeEEEeccc-CCCcceEEEecC--------------------CCEEEEEeCCCCeEEEEEeeCCCCcce
Q 015463 229 TGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKD--------------------KSFFVFCEGSVGRLHKYWLIGEKAGNL 287 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d--------------------~~~l~v~~t~~~~i~~~~~~g~~~~~~ 287 (406)
+|.+..||..+++....... ....+.++++|+ +..+ ++....+.|..+++.... ..
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~sgs~D~~i~iwd~~~~~--~~ 331 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL-LSGSRDKTIKMWDVSTGM--CL 331 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE-EEEETTSEEEEEETTTTE--EE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEE-EEEeCCCeEEEEECCCCc--eE
Confidence 46788888887765543322 233456778775 3444 454556788888865321 11
Q ss_pred eeeecCCCCCCceEECCCCCEEEEEccC
Q 015463 288 EAFAILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 288 ~~~~~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
..+..-.+....++++++|.+.++....
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D 359 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADD 359 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCC
Confidence 1111111223456788888866655433
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.28 E-value=0.00014 Score=75.74 Aligned_cols=211 Identities=9% Similarity=0.032 Sum_probs=111.9
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCcee--EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWT--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..++++++||+.++++.. +.|+.++...-. ... ........+..+++++ +|+..+.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~--------------------~l~~~~~~~~~~~~SP-DG~~la~ 168 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR--------------------QLTHGEGFATDAKLSP-KGGFVSF 168 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC--------------------BCCCSSSCEEEEEECT-TSSEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE--------------------EcccCCcccccccCCC-CCCEEEE
Confidence 468899999996666664 889999865210 000 0111124467889999 6764333
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCc------------ccccccceEEcCCCC-EEEEeCCCchhhhccc-----ccccc
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGV------------PLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQ-----KENIP 210 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~------------~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~-----~~~~~ 210 (406)
...+.|+.+|.++++...+....... .+..+.++++.+||+ |+++..... ....+. .+...
T Consensus 169 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~-~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 169 IRGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES-PVPVQKRYEVYADRTD 247 (741)
T ss_dssp EETTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT-TSCEEEEEEECSSCEE
T ss_pred EeCCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC-CCceEecCCCCCCccc
Confidence 33468999999988776554321110 011257789999996 666532100 000000 00000
Q ss_pred cccc-ccCCCCCCCcccCCCCeEEEEeCCC-CeEEEeccc---CCCcceEEEecCCCEEEEEeC----CCCeEEEEEeeC
Q 015463 211 LQLC-SSLNDPSPIKITKDTGRVLKYDPTT-KQTTVLLRN---LQFPNGLSLSKDKSFFVFCEG----SVGRLHKYWLIG 281 (406)
Q Consensus 211 ~~~~-~e~~~~~~~~~~~~~g~l~~~d~~t-~~~~~~~~~---~~~~ngi~l~~d~~~l~v~~t----~~~~i~~~~~~g 281 (406)
...+ .. ..+ .......|+.+|.++ ++...+... ......+++ +|++.++++.. ....|+.+++.+
T Consensus 248 ~~~~~~~--~~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~ 321 (741)
T 2ecf_A 248 VIEQRYP--AAG---DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS 321 (741)
T ss_dssp EEEEECC--BTT---SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT
T ss_pred ceEeecC--CCC---CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC
Confidence 0000 00 000 000112688999988 776655422 223457889 99998887653 124677777653
Q ss_pred CCCcceeeeec-CCC---CCCceEECCCCCEEEEE
Q 015463 282 EKAGNLEAFAI-LPG---YPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 282 ~~~~~~~~~~~-l~g---~pd~i~~d~~G~lwv~~ 312 (406)
.+. ..++.. ..+ ....+++++||+++++.
T Consensus 322 g~~--~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 322 NQQ--RVLAHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp CCE--EEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred Cce--EEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 221 112221 112 23467888999855444
No 174
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.28 E-value=0.00072 Score=64.87 Aligned_cols=160 Identities=13% Similarity=0.126 Sum_probs=102.0
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
+.-....++++.++|+.+++++.+|.|..|+.. ....+. ...+....+++.+ +
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----------------------~h~~~v~~~~~~~-~ 192 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-----------------------GHRATVTDIAIID-R 192 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-----------------------CCSSCEEEEEEET-T
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-----------------------CCCCcEEEEEEcC-C
Confidence 333456789999999989999999999999876 122221 1124467899998 5
Q ss_pred Cc-EEEEeCCCcEEEEeCCCCeEEEcccccCCc--------------------ccccccceEEcCCCCEEEEeCCCchhh
Q 015463 143 GD-LYIADAYFGLMKVGPEGGLATSLATEAEGV--------------------PLRFTNDLDIDDEGNVYFTDSSTNYQR 201 (406)
Q Consensus 143 g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~--------------------~~~~~~~l~~d~dG~ly~t~~~~~~~~ 201 (406)
++ |+.+...+.|..+|..+++........... ....+..++++++|++.++.+
T Consensus 193 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------ 266 (420)
T 3vl1_A 193 GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH------ 266 (420)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE------
T ss_pred CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc------
Confidence 55 555655566999998877643322110000 012345566777886655532
Q ss_pred hccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-cc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 015463 202 RQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-RN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 279 (406)
Q Consensus 202 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~ 279 (406)
.+|.|..||..+++..... .. ......++++++++.++++....+.|..+++
T Consensus 267 --------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 267 --------------------------VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp --------------------------TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred --------------------------CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 2477999998877644332 22 2345689999999834444455688999987
Q ss_pred eC
Q 015463 280 IG 281 (406)
Q Consensus 280 ~g 281 (406)
..
T Consensus 321 ~~ 322 (420)
T 3vl1_A 321 RS 322 (420)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.27 E-value=6.4e-05 Score=71.62 Aligned_cols=156 Identities=9% Similarity=-0.071 Sum_probs=92.9
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe-
Q 015463 73 SMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD- 149 (406)
Q Consensus 73 ~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad- 149 (406)
+++++++|+.|++...++.|+.++.. +.+.+...... ........+++ ++.++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~-dg~~l~~~~ 143 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE--------------------WVGYGTWVANS-DCTKLVGIE 143 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--------------------EEEEEEEEECT-TSSEEEEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh--------------------cccccceeECC-CCCeecccc
Confidence 56899999988888888899999976 22222211100 00011123355 66665531
Q ss_pred ----------------------CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCC-EEEEeCCCchhhhccc
Q 015463 150 ----------------------AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGN-VYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 150 ----------------------~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~-ly~t~~~~~~~~~~~~ 205 (406)
....|+.+|.++++.+.+.... ..+.++.+.+ ||+ |.++.... .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~-~------ 211 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGP-H------ 211 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC-T------
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecC-C------
Confidence 1246999999988877664321 2356788999 885 44443210 0
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCC--CcceEEEecCCCEEEE-EeCCCC---eEEEEEe
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQ--FPNGLSLSKDKSFFVF-CEGSVG---RLHKYWL 279 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~--~~ngi~l~~d~~~l~v-~~t~~~---~i~~~~~ 279 (406)
.....+|+.+|.++++.+.+..... ....++++||++.+++ +..... .|+++++
T Consensus 212 --------------------~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 212 --------------------DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp --------------------TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred --------------------CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 0113479999998777766654331 2345789999997744 433222 3888887
Q ss_pred eC
Q 015463 280 IG 281 (406)
Q Consensus 280 ~g 281 (406)
++
T Consensus 272 ~~ 273 (388)
T 3pe7_A 272 ET 273 (388)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 176
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00092 Score=62.72 Aligned_cols=197 Identities=13% Similarity=0.048 Sum_probs=115.5
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK- 141 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~- 141 (406)
.+.-....+++++++|+.+.++..+|.|..|+.. ......... ...+....+++.++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~~~ 67 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--------------------GHEGPVWRVDWAHPK 67 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCGG
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec--------------------CCCCcEEEEEeCCCC
Confidence 3344456788999999988899999999988754 222221111 11234567888752
Q ss_pred -CCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeCCCchhhhccccccccccccccCC
Q 015463 142 -TGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 142 -~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
...|+.+...+.|..+|.++++........ + ....+.++++.++ |.+.++.+.
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~~~~~---------------------- 123 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEENGRWSQIAVHA-V-HSASVNSVQWAPHEYGPLLLVASS---------------------- 123 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCGGGCSEEEEEET----------------------
T ss_pred CCCEEEEeccCCEEEEEEcCCCceeEeeeec-C-CCcceEEEEeCCCCCCCEEEEecC----------------------
Confidence 234556665566888888877533322211 1 1234778899888 876666432
Q ss_pred CCCCCcccCCCCeEEEEeCCCCe---EEEecccCCCcceEEEec-------------CCCEEEEEeCCCCeEEEEEeeCC
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQ---TTVLLRNLQFPNGLSLSK-------------DKSFFVFCEGSVGRLHKYWLIGE 282 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~~ngi~l~~-------------d~~~l~v~~t~~~~i~~~~~~g~ 282 (406)
+|.+..||..++. ...+.........+++++ |++.++.+. ..+.|..|++...
T Consensus 124 ----------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 124 ----------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSD 192 (379)
T ss_dssp ----------TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE-TTSCEEEEEEETT
T ss_pred ----------CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe-CCCeEEEEEecCC
Confidence 3678888887662 122222233446788888 577665554 4678888887643
Q ss_pred CCcceeeeecCCC---CCCceEECCC---CCEEEEEccCCc
Q 015463 283 KAGNLEAFAILPG---YPDNVRTNEK---GEFWVAIHCRRS 317 (406)
Q Consensus 283 ~~~~~~~~~~l~g---~pd~i~~d~~---G~lwv~~~~~~~ 317 (406)
... ......+.+ ....++++++ |++.++......
T Consensus 193 ~~~-~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 193 AQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp TTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred Ccc-eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 211 111112222 2345677888 666665544433
No 177
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.24 E-value=6.9e-05 Score=71.32 Aligned_cols=187 Identities=10% Similarity=-0.007 Sum_probs=110.7
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE-EEEe
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YIAD 149 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L-~Vad 149 (406)
..++++.++|+.+.++..+|.|..|+....+...... ...+....+++.+++..+ ..+.
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~--------------------~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN--------------------AHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECTTCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc--------------------CCCCCEEEEEEccCCCceeeeec
Confidence 4678999999988999999999999976222221111 012345678888733334 4454
Q ss_pred CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
..+.|..+|.++++....... ......+..+++.+++ .++++.+ .
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~--~~~~~~v~~v~~sp~~~~~la~g~--------------------------------~ 247 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDF--CASDTIPTSVTWHPEKDDTFACGD--------------------------------E 247 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCC--TTCCSCEEEEEECTTSTTEEEEEE--------------------------------S
T ss_pred cCCceEEEECCCCceeeeeee--ccccccccchhhhhcccceEEEee--------------------------------c
Confidence 456688888877643221111 1112346778888765 5554432 1
Q ss_pred CCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecC--CCCCCceEECC-
Q 015463 229 TGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAIL--PGYPDNVRTNE- 304 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l--~g~pd~i~~d~- 304 (406)
++.|..||..+++......+ ....+.++++++++.++++....+.|..+++... +.+..+ .+....+++.+
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----~~~~~~~H~~~V~~vafsP~ 322 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----EVFRDLSHRDFVTGVAWSPL 322 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----EEEEECCCSSCEEEEEECSS
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----cEeEECCCCCCEEEEEEeCC
Confidence 36788899887754333332 2334689999998665555555567877776432 222211 12234567775
Q ss_pred CCCEEEEEccCC
Q 015463 305 KGEFWVAIHCRR 316 (406)
Q Consensus 305 ~G~lwv~~~~~~ 316 (406)
+|.+.++....+
T Consensus 323 d~~~l~s~s~Dg 334 (357)
T 4g56_B 323 DHSKFTTVGWDH 334 (357)
T ss_dssp STTEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 687776655443
No 178
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.23 E-value=0.0013 Score=63.59 Aligned_cols=154 Identities=12% Similarity=0.138 Sum_probs=100.7
Q ss_pred cccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.-....++++.+++..+.+++.+|.|..|+.. ...... ....+....+++++ +++
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l----------------------~~h~~~V~~v~~~~-~~~ 163 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL----------------------KGHTDSVQDISFDH-SGK 163 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE----------------------CCCSSCEEEEEECT-TSS
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE----------------------eccCCcEEEEEEcC-CCC
Confidence 33445788999999989999999999999976 211110 01123467899998 565
Q ss_pred E-EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 L-YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 L-~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
+ ..+...+.|..+|..+++...... + ....+.++++.++|+..++.+.
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~---~-h~~~V~~v~~~p~~~~l~s~s~--------------------------- 212 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMH---G-HDHNVSSVSIMPNGDHIVSASR--------------------------- 212 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCC---C-CSSCEEEEEECSSSSEEEEEET---------------------------
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEc---C-CCCCEEEEEEeCCCCEEEEEeC---------------------------
Confidence 4 455555668888887765432111 1 1234778999999987776532
Q ss_pred cccCCCCeEEEEeCCCCeEEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 224 KITKDTGRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
++.+..||..+++...... .......+++++|++.+..+. ..+.|..+++.
T Consensus 213 -----D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s-~D~~v~vwd~~ 264 (410)
T 1vyh_C 213 -----DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-NDQTVRVWVVA 264 (410)
T ss_dssp -----TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETT
T ss_pred -----CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc-CCCeEEEEECC
Confidence 4779999998876543322 223446788999998665544 45677777765
No 179
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.00025 Score=66.29 Aligned_cols=198 Identities=13% Similarity=0.016 Sum_probs=117.3
Q ss_pred CcceEEEcCCCCeeEEEecC-----CEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcC--CcceEEEEe
Q 015463 70 GPESMAFDPLGRGPYTGVAD-----GRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHIC--GRPLGLRFD 139 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~-----g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~gi~~d 139 (406)
...++++.++|+.++++..+ |.|..|+.. ....+......... ...... .....++++
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH------------KIITHEGLDAATVAGWS 184 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE------------EEECCTTCCCEEEEEEC
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee------------eccCCcCccceeEEEEc
Confidence 45788999999988888888 889888754 11111111100000 000011 246788898
Q ss_pred CCCCcEEEEeCCCcEEEEeCCC-CeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCC
Q 015463 140 KKTGDLYIADAYFGLMKVGPEG-GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 140 ~~~g~L~Vad~~~gl~~~d~~~-~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
++...|+++...+.|..+|..+ ++........ ...+.++++.++|++.++.+.
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~---------------------- 238 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH----EKSISDMQFSPDLTYFITSSR---------------------- 238 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTTEEEEEEECC----SSCEEEEEECTTSSEEEEEET----------------------
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC----CCceeEEEECCCCCEEEEecC----------------------
Confidence 8333466666667799999887 3332211111 234678899999987666432
Q ss_pred CCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCC-------------eEEEEEeeCCCCc
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVG-------------RLHKYWLIGEKAG 285 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~-------------~i~~~~~~g~~~~ 285 (406)
+|.|..||..+++.............++++++++.++++..... .+..++.... .
T Consensus 239 ----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~ 306 (369)
T 3zwl_B 239 ----------DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--E 306 (369)
T ss_dssp ----------TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC--C
T ss_pred ----------CceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--c
Confidence 37899999988876655544455678999999998887765432 4555554321 1
Q ss_pred ceeeeecCCCCCCceEECCCCCEEEEEccCCc
Q 015463 286 NLEAFAILPGYPDNVRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 286 ~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~ 317 (406)
....+..-.+....++++++|++.++......
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 307 EIGRVQGHFGPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred chhheecccCcEEEEEECCCCCEEEEEcCCCe
Confidence 11112111223345778889987776654433
No 180
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.23 E-value=0.00095 Score=63.31 Aligned_cols=170 Identities=11% Similarity=0.046 Sum_probs=100.5
Q ss_pred cCcccCcceEEEcC-CCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 65 LNQIQGPESMAFDP-LGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 65 ~~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
.+.-....++++.+ +|+.+++++.+|.|..|+.. . ...+.... .+... .............+++.+
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~v~~~~~~~ 109 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA-----VCSIG-----RDHPDVHRYSVETVQWYP 109 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE-----EEEEC-----TTCTTCCSSCEEEEEECT
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc-----ccccc-----ccccccCCCcEEEEEEcc
Confidence 33344567899999 99989999999999999866 1 11111000 00000 000011234567899987
Q ss_pred CCC-cEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC---CCCEEEEeCCCchhhhcccccccccccccc
Q 015463 141 KTG-DLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD---EGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 141 ~~g-~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~---dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
+++ .|..+...+.|..+|.++++....... . ..+..+...+ ++.+.++..
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~--------------------- 163 (408)
T 4a11_B 110 HDTGMFTSSSFDKTLKVWDTNTLQTADVFNF-E----ETVYSHHMSPVSTKHCLVAVGT--------------------- 163 (408)
T ss_dssp TCTTCEEEEETTSEEEEEETTTTEEEEEEEC-S----SCEEEEEECSSCSSCCEEEEEE---------------------
T ss_pred CCCcEEEEEeCCCeEEEeeCCCCccceeccC-C----CceeeeEeecCCCCCcEEEEEc---------------------
Confidence 344 455665566799999988765433221 1 1234455544 344555432
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.+|.|..||..+++...... .......++++++++.++++....+.|..+++..
T Consensus 164 -----------~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 164 -----------RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp -----------SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred -----------CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 13679999988775433332 2234568999999986666656667888888753
No 181
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.21 E-value=2e-05 Score=74.93 Aligned_cols=191 Identities=9% Similarity=-0.041 Sum_probs=106.4
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
...++++.++|+.+.+++.+|.|..|+.. . +.... ......+....+++.+++..|..
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~--------------------~~~~h~~~v~~~~~s~~~~~l~s 72 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR--------------------TFSDHDKIVTCVDWAPKSNRIVT 72 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC--------------------CBCCCSSCEEEEEECTTTCCEEE
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE--------------------EEecCCceEEEEEEeCCCCEEEE
Confidence 45788999999988888889988888754 1 12111 11111345678999983334566
Q ss_pred EeCCCcEEEEeCCCCe----EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 148 ADAYFGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~----~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
+...+.|..+|.++++ ...+.. ....+.++++.++|++.++.+.
T Consensus 73 ~s~d~~v~vwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--------------------------- 120 (377)
T 3dwl_C 73 CSQDRNAYVYEKRPDGTWKQTLVLLR-----LNRAATFVRWSPNEDKFAVGSG--------------------------- 120 (377)
T ss_dssp EETTSSEEEC------CCCCEEECCC-----CSSCEEEEECCTTSSCCEEEES---------------------------
T ss_pred EeCCCeEEEEEcCCCCceeeeeEecc-----cCCceEEEEECCCCCEEEEEec---------------------------
Confidence 6656678888887765 222111 1234678888888876555422
Q ss_pred cccCCCCeEEEEeCCCCe----EEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCC-------------c
Q 015463 224 KITKDTGRVLKYDPTTKQ----TTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA-------------G 285 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~----~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~-------------~ 285 (406)
++.+..||.++++ ...+.. .-.....+++++|++.++... ..+.|..+++..... .
T Consensus 121 -----d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 194 (377)
T 3dwl_C 121 -----ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLP 194 (377)
T ss_dssp -----SSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCC
T ss_pred -----CCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccc
Confidence 3668888887665 333333 233457899999998776554 356788888742110 0
Q ss_pred ceeeeecC--CCCCCceEECCCCCEEEEEccCCcc
Q 015463 286 NLEAFAIL--PGYPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 286 ~~~~~~~l--~g~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
..+....+ .+....++++++|++.++......+
T Consensus 195 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 195 FNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEE
T ss_pred hhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcE
Confidence 01112122 1123356788999866655444333
No 182
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.0014 Score=59.74 Aligned_cols=182 Identities=13% Similarity=0.026 Sum_probs=104.5
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCc---eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLK---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
....++++.++++.++++..+|.|..|+... ...+. ...........+.++ ++.+
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~--------------------~~~~~~~~i~~~~~~--~~~l 117 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY--------------------TLIGHQGNVCSLSFQ--DGVV 117 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C--------------------EECCCSSCEEEEEEE--TTEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc--------------------chhhcccCEEEEEec--CCEE
Confidence 3457889999999899999999998887541 11110 011112345677785 4677
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
+.+...+.|..+|. ......+... ...+..++..+ +++..++.+.
T Consensus 118 ~~~~~d~~i~~~d~-~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~---------------------------- 163 (313)
T 3odt_A 118 ISGSWDKTAKVWKE-GSLVYNLQAH-----NASVWDAKVVSFSENKFLTASA---------------------------- 163 (313)
T ss_dssp EEEETTSEEEEEET-TEEEEEEECC-----SSCEEEEEEEETTTTEEEEEET----------------------------
T ss_pred EEEeCCCCEEEEcC-CcEEEecccC-----CCceeEEEEccCCCCEEEEEEC----------------------------
Confidence 77777677888882 2222222211 12345666655 6666555432
Q ss_pred ccCCCCeEEEEeCCCCeEEEecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEEC
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTN 303 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d 303 (406)
+|.+..||.. .....+.. .......+++++++. + ++....+.|..+++...+ ....+..-.+....++++
T Consensus 164 ----d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 164 ----DKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-F-ISCSNDGLIKLVDMHTGD--VLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp ----TSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-E-EEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEC
T ss_pred ----CCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-E-EEccCCCeEEEEECCchh--hhhhhhcCCceEEEEEEe
Confidence 3678888843 23333332 334456789999987 4 444456788888875321 111222122334457788
Q ss_pred CCCCEEEEEccC
Q 015463 304 EKGEFWVAIHCR 315 (406)
Q Consensus 304 ~~G~lwv~~~~~ 315 (406)
++|.+..+...+
T Consensus 235 ~~~~l~~~~~dg 246 (313)
T 3odt_A 235 PNGDIVSCGEDR 246 (313)
T ss_dssp TTSCEEEEETTS
T ss_pred cCCCEEEEecCC
Confidence 888766655443
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.20 E-value=0.0016 Score=62.03 Aligned_cols=63 Identities=5% Similarity=-0.032 Sum_probs=41.4
Q ss_pred CcceEEEEeCCCCcEEEEeC----------CCcEEEEeCCCCeEEEcccccCCc--ccccccceEEcCCC-CEEEEe
Q 015463 131 GRPLGLRFDKKTGDLYIADA----------YFGLMKVGPEGGLATSLATEAEGV--PLRFTNDLDIDDEG-NVYFTD 194 (406)
Q Consensus 131 ~~p~gi~~d~~~g~L~Vad~----------~~gl~~~d~~~~~~~~l~~~~~~~--~~~~~~~l~~d~dG-~ly~t~ 194 (406)
..| +++++++...||++.. .+.|..+|.++.+...-.....+. ....|.++++++|| .+|+++
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN 126 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence 447 9999995557999974 134899998876543211111110 12468899999999 577776
No 184
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.20 E-value=0.00023 Score=66.89 Aligned_cols=189 Identities=9% Similarity=-0.041 Sum_probs=110.8
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
....++++.++|+.++++..+|.|..|+.. ........ ......+..+++.+++..|+
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------~~~~~~v~~~~~~~~~~~l~ 112 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI--------------------LRINRAARCVRWAPNEKKFA 112 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC--------------------CCCSSCEEEEEECTTSSEEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe--------------------ecCCCceeEEEECCCCCEEE
Confidence 345789999999988999999999988864 22211110 01124467899998434466
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
++...+.+..+|.+++................+.++++.++|+++++.+.
T Consensus 113 ~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------------------------ 162 (372)
T 1k8k_C 113 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC------------------------------ 162 (372)
T ss_dssp EEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET------------------------------
T ss_pred EEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC------------------------------
Confidence 66655667777766554111101111111235778999999987766432
Q ss_pred CCCCeEEEEeCC------------------CCeEEE-ecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcce
Q 015463 227 KDTGRVLKYDPT------------------TKQTTV-LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNL 287 (406)
Q Consensus 227 ~~~g~l~~~d~~------------------t~~~~~-~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~ 287 (406)
+|.+..||.. +++... +.........++++++++.++.+. ..+.|..|++...+ ..
T Consensus 163 --dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~ 237 (372)
T 1k8k_C 163 --DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--AV 237 (372)
T ss_dssp --TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--EE
T ss_pred --CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--ee
Confidence 3667777732 333332 222233457899999998776665 46788888876321 11
Q ss_pred eeeecCCCCCCceEECCCCCEEEEE
Q 015463 288 EAFAILPGYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 288 ~~~~~l~g~pd~i~~d~~G~lwv~~ 312 (406)
..+..-.+....++++++|.+.++.
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE
Confidence 1222111223456777888766655
No 185
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.19 E-value=0.00037 Score=64.94 Aligned_cols=174 Identities=7% Similarity=0.094 Sum_probs=104.2
Q ss_pred EeCCCCcEEEEe---C-CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC-CCEEEEeCCCchhhhcccccccccc
Q 015463 138 FDKKTGDLYIAD---A-YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE-GNVYFTDSSTNYQRRQMQKENIPLQ 212 (406)
Q Consensus 138 ~d~~~g~L~Vad---~-~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~ 212 (406)
+.++++.||.++ . ...|++++.++...+.+.... . .+++.+ +.||+++..
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~-~--------~~~~~~g~~iy~t~~g---------------- 165 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY-L--------FTCNTSDRYFYYNNPK---------------- 165 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC-C--------CCSEEETTEEEEECTT----------------
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC-c--------eEeeEECCEEEEEeCC----------------
Confidence 333367888887 2 346999999987766654331 1 122333 489999742
Q ss_pred ccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC-CeEEEEEeeCCCCcceeeee
Q 015463 213 LCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-GRLHKYWLIGEKAGNLEAFA 291 (406)
Q Consensus 213 ~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~-~~i~~~~~~g~~~~~~~~~~ 291 (406)
...|++.+.+++..+.+..+ +....++|+++.+|+++... .+|++.+++|.. .+++.
T Consensus 166 ----------------~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt 223 (302)
T 3s25_A 166 ----------------NGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLT 223 (302)
T ss_dssp ----------------TCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECS
T ss_pred ----------------CceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEe
Confidence 25699999987776666543 22245678999999997643 589999988642 23332
Q ss_pred cCCCCCCceEECCCCC-EEEEEccCCcchhhhhhcChhhhhhhhccCccceeeeeEeecCcceEEEEEECCCCCEEEEEE
Q 015463 292 ILPGYPDNVRTNEKGE-FWVAIHCRRSLYSHLMALYPKIRHFLLKLPISAKTHYLIHVGGRLHAMAVKYSPEGKILQVLE 370 (406)
Q Consensus 292 ~l~g~pd~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 370 (406)
+- .+| .++++|. ||-+.... ...+.+.+.+|...+.+.
T Consensus 224 ~~-~~~---~~~~~g~~Iy~~~~~~-------------------------------------~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 224 EA-NIE---HYNVYGSLIFYQRGGD-------------------------------------NPALCVVKNDGTGFKELA 262 (302)
T ss_dssp CS-CEE---EEEEETTEEEEEECSS-------------------------------------SCEEEEEETTSCCCEEEE
T ss_pred CC-Ccc---eEEECCCEEEEEECCC-------------------------------------CcEEEEEECCCCccEEee
Confidence 11 111 2333443 43332211 023566677775444433
Q ss_pred CCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 371 DSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 371 ~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
.. . +..+...+++||+.......|.++++
T Consensus 263 ~~--~----~~~i~i~~d~Iy~td~~~~~i~~~~~ 291 (302)
T 3s25_A 263 KG--E----FCNINVTSQYVYFTDFVSNKEYCTST 291 (302)
T ss_dssp ES--C----EEEEEECSSEEEEEETTTCCEEEEES
T ss_pred CC--c----cceEEEeCCEEEEEECCCCeEEEEEC
Confidence 21 1 22455678999999988888888775
No 186
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.16 E-value=0.0021 Score=66.65 Aligned_cols=191 Identities=12% Similarity=0.077 Sum_probs=116.2
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+.-....++++.++|+.+.+++.+|.|..|+...-....... ...+....+++++++..
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~s~~~~~ 486 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV--------------------GHTKDVLSVAFSLDNRQ 486 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECTTSSC
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe--------------------CCCCCEEEEEEeCCCCE
Confidence 3444456789999999988999999999999976211111110 01234678999984344
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC--CEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG--NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
|..+...+.|..+|..+.....+.....+ ....+.++++.+++ .+.++.+
T Consensus 487 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s--------------------------- 538 (694)
T 3dm0_A 487 IVSASRDRTIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPNTLQPTIVSAS--------------------------- 538 (694)
T ss_dssp EEEEETTSCEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSCSSSCEEEEEE---------------------------
T ss_pred EEEEeCCCEEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCCCCcceEEEEe---------------------------
Confidence 66666667788898766543333221111 12346788888876 3444432
Q ss_pred CcccCCCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCCCCCce
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNV 300 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g~pd~i 300 (406)
.+|.|..+|..+++......+. ...+.+++++|++.+..+ ...+.|..+++... + .+.. ........+
T Consensus 539 -----~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg-~~Dg~i~iwd~~~~---~-~~~~~~~~~~v~~~ 608 (694)
T 3dm0_A 539 -----WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG-GKDGVVLLWDLAEG---K-KLYSLEANSVIHAL 608 (694)
T ss_dssp -----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSBCEEEETTTT---E-EEECCBCSSCEEEE
T ss_pred -----CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCCC---c-eEEEecCCCcEEEE
Confidence 2477899998887765544332 345789999999876554 44577888886532 1 1111 112223456
Q ss_pred EECCCCCEEEEEc
Q 015463 301 RTNEKGEFWVAIH 313 (406)
Q Consensus 301 ~~d~~G~lwv~~~ 313 (406)
+++++|.+.++..
T Consensus 609 ~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 609 CFSPNRYWLCAAT 621 (694)
T ss_dssp EECSSSSEEEEEE
T ss_pred EEcCCCcEEEEEc
Confidence 7788887665543
No 187
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.15 E-value=0.00022 Score=68.03 Aligned_cols=190 Identities=10% Similarity=0.020 Sum_probs=114.5
Q ss_pred cceEEEcCCCCeeEEEe--cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGV--ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~--~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..++++.|||+.+.+++ .++.|..|+....+...... + .+...+++|.+ +|.+++.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--------------------~-~~~V~~v~fsp-dg~~l~s 193 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--------------------T-RGEVKDLHFST-DGKVVAY 193 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--------------------C-SSCCCEEEECT-TSSEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--------------------C-CCceEEEEEcc-CCceEEe
Confidence 34689999999766655 57889999977222221111 1 23467899999 7887777
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
....++.+++..++........ ......++.+++.++|...++.+.. ...
T Consensus 194 ~s~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~fspdg~~l~~~s~d----------------------------~~~ 243 (365)
T 4h5i_A 194 ITGSSLEVISTVTGSCIARKTD--FDKNWSLSKINFIADDTVLIAASLK----------------------------KGK 243 (365)
T ss_dssp ECSSCEEEEETTTCCEEEEECC--CCTTEEEEEEEEEETTEEEEEEEES----------------------------SSC
T ss_pred ccceeEEEEEeccCcceeeeec--CCCCCCEEEEEEcCCCCEEEEEecC----------------------------Ccc
Confidence 6677888888776654322111 1112346788999999877765321 001
Q ss_pred CCeEEEEeCCCCeEEE-----ecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CCCC---CCc
Q 015463 229 TGRVLKYDPTTKQTTV-----LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGY---PDN 299 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~-----~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~g~---pd~ 299 (406)
...+..++........ +.......+.++++||++.+.... ..+.|..+++.. + +.... +.|. ...
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs-~D~~V~iwd~~~---~--~~~~~~~~gH~~~V~~ 317 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS-NDNSIALVKLKD---L--SMSKIFKQAHSFAITE 317 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE-TTSCEEEEETTT---T--EEEEEETTSSSSCEEE
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc-CCCEEEEEECCC---C--cEEEEecCcccCCEEE
Confidence 1135556655444322 222223346789999999775554 457788888652 2 12221 2333 345
Q ss_pred eEECCCCCEEEEEccCCcc
Q 015463 300 VRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 300 i~~d~~G~lwv~~~~~~~~ 318 (406)
+++++||++.++.....++
T Consensus 318 v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEECTTSCEEEEEETTSEE
T ss_pred EEECCCCCEEEEEeCCCeE
Confidence 7889999988877655444
No 188
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.15 E-value=0.00081 Score=67.79 Aligned_cols=192 Identities=12% Similarity=0.008 Sum_probs=110.8
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCce----eEEEeecCCCccccCCCCCcccccccCCcCCc-ceEEEEeC--C
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKW----TDFAFTSNNRSELCNPKPIATSYLKNEHICGR-PLGLRFDK--K 141 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~d~--~ 141 (406)
..+.+++++++|+.+.++. ++.|..|+.+.. ..... .....+. +..+++.+ +
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~--------------------~~~h~~~~v~~~~~sp~~~ 77 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQ--------------------FTGHGSSVVTTVKFSPIKG 77 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEE--------------------ECTTTTSCEEEEEECSSTT
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceE--------------------EecCCCceEEEEEECcCCC
Confidence 3567889999999666666 788988886521 11111 1111344 67899998 6
Q ss_pred CCcEEEEeCCCcEEEEeCCCC------eEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADAYFGLMKVGPEGG------LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~~~gl~~~d~~~~------~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
...|..+...+.|..+|..++ ..+..... .+ ....+.++++.++|...++....
T Consensus 78 ~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~~------------------ 137 (615)
T 1pgu_A 78 SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF-QV-LAGPISDISWDFEGRRLCVVGEG------------------ 137 (615)
T ss_dssp CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE-EC-CSSCEEEEEECTTSSEEEEEECC------------------
T ss_pred CCEEEEecCCCEEEEEeCCCCcccccccccccchh-hc-ccccEEEEEEeCCCCEEEEeccC------------------
Confidence 566777776667888887544 22221111 11 12347789999999876664321
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCC
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
....+.++.+|.. .....+.........++++++++.++++....+.|..+++...+ ....+..-.+
T Consensus 138 ----------~~~~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~ 204 (615)
T 1pgu_A 138 ----------RDNFGVFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHK 204 (615)
T ss_dssp ----------SSCSEEEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSC
T ss_pred ----------CCCccEEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCC
Confidence 1113568888732 33333333334457899999998555555566788888854211 1111111111
Q ss_pred ---CCCceEECCC-CCEEEEEcc
Q 015463 296 ---YPDNVRTNEK-GEFWVAIHC 314 (406)
Q Consensus 296 ---~pd~i~~d~~-G~lwv~~~~ 314 (406)
....++++++ |++.++...
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEET
T ss_pred CCceEEEEEECCCCCCEEEEEeC
Confidence 2335677888 886655443
No 189
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.15 E-value=0.0004 Score=67.98 Aligned_cols=191 Identities=9% Similarity=0.038 Sum_probs=117.6
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC---Cc-E
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT---GD-L 145 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~---g~-L 145 (406)
.+.+++++++|+.++++..+|.|+.++........ .+.. ......+.+..+++.+ + +. |
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~--------~~~~--------~~~~h~~~v~~~~~sp-~~~~~~~l 213 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK--------FTQE--------PILGHVSMLTDVHLIK-DSDGHQFI 213 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS--------CCCC--------CSEECSSCEEEEEEEE-CTTSCEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc--------ccce--------eeecccCceEEEEEcC-CCCCCcEE
Confidence 45789999999989999999999999864110000 0000 0011134567899998 5 54 5
Q ss_pred EEEeCCCcEEEEeCCCCeEE-EcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~-~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
+.++..+.|..+|..+++.. .+... ....+.++++. +|.+.++.+.
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~----h~~~v~~~~~s-d~~~l~s~~~---------------------------- 260 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFG----HKHFVSSICCG-KDYLLLSAGG---------------------------- 260 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCC----CSSCEEEEEEC-STTEEEEEES----------------------------
T ss_pred EEEcCCCcEEEEECCCCceeeeeecC----CCCceEEEEEC-CCCEEEEEeC----------------------------
Confidence 55555567888888766532 21111 12357788999 8887776532
Q ss_pred ccCCCCeEEEEeCCCCeEEEeccc--------------------------CCCcceEEEecCCCEEEEEeCCCCeEEEEE
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLRN--------------------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYW 278 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~~--------------------------~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~ 278 (406)
++.|..||..+++....... -.....+++++|++.++++....+.|..|+
T Consensus 261 ----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 261 ----DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp ----SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred ----CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 47899999888764332210 112357889999999988875678898888
Q ss_pred eeCCCCcceeeee--cCCCCCCceEECCCCCEEEEEccC
Q 015463 279 LIGEKAGNLEAFA--ILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 279 ~~g~~~~~~~~~~--~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
+.....+..+... ...+.+..+++++ +.+|++....
T Consensus 337 ~~~~~~~~l~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~ 374 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFPYNVISLSAHN-DEFQVTLDNK 374 (450)
T ss_dssp ECSSSTTCEEEEEEEECSSCEEEEEEET-TEEEEEECCT
T ss_pred eccCCCCceeeccEeccCCceEEEEecC-CcEEEEEecc
Confidence 8211122222222 2234556677877 4588877543
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.14 E-value=0.00068 Score=65.07 Aligned_cols=181 Identities=13% Similarity=0.007 Sum_probs=101.0
Q ss_pred cCcceEEEcCCCCeeEEEec--CCEEEEEeCCceeEEEe-ecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDPLGRGPYTGVA--DGRILFWDGLKWTDFAF-TSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~--~g~I~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
..|+.++++++|+.+|+... ++.|..+| +..+.... .. . |-++.+.+...+.
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~---------------------~---~~~~~~~~~~~~~ 179 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS---------------------S---PTCYHIHPGAPST 179 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC---------------------C---CceEEEEeCCCce
Confidence 46899999999999999864 47899999 72222211 10 0 1112333324456
Q ss_pred EEEeCC-CcEEEEeCCCCeEEEccc--c--cCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 146 YIADAY-FGLMKVGPEGGLATSLAT--E--AEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 146 ~Vad~~-~gl~~~d~~~~~~~~l~~--~--~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
|++... +.+..++. +++...... . ....+. .......+ ++.+|+....
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~----------------------- 233 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL--LTQPAQANKSGRIVWPVYS----------------------- 233 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce--eecceeEecCCEEEEEcCC-----------------------
Confidence 666554 45777777 554331111 0 011110 11122223 3455555422
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEEEec----------ccCCCcce---EEEecCCCEEEEEeCC---------CCeEEEE
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTTVLL----------RNLQFPNG---LSLSKDKSFFVFCEGS---------VGRLHKY 277 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~~~~----------~~~~~~ng---i~l~~d~~~l~v~~t~---------~~~i~~~ 277 (406)
+.++.+|..++..+... .....|.| +++++|++.+|++... .+.|+++
T Consensus 234 ----------~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 234 ----------GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred ----------ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 56777887654322211 01112444 8899999999997542 3579999
Q ss_pred EeeCCCCcceeeeecCCCCCCceEECCCCC-EEEEEc
Q 015463 278 WLIGEKAGNLEAFAILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 278 ~~~g~~~~~~~~~~~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
+.+.. +..-....++.|.++++++||+ +|++.+
T Consensus 304 D~~t~---~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 304 TGLVG---QTSSQISLGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ECCCC---EEEEEEECCCCcCeEEECCCCCeEEEEEc
Confidence 97532 2111224566799999999999 666654
No 191
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.13 E-value=0.0018 Score=65.15 Aligned_cols=182 Identities=13% Similarity=0.131 Sum_probs=108.2
Q ss_pred cceEEEcC--CCCeeEEEecCCEEEEEeCC-c------eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 71 PESMAFDP--LGRGPYTGVADGRILFWDGL-K------WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 71 pe~i~~d~--~g~~ly~g~~~g~I~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..++++.+ +|+.++++..+|.|..|+.. . ....... ..........+++++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~s~- 126 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSE-------------------FQVLAGPISDISWDF- 126 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEE-------------------EECCSSCEEEEEECT-
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccch-------------------hhcccccEEEEEEeC-
Confidence 57899999 99989999999999998763 1 1111100 011124467899998
Q ss_pred CCc-EEEEeCC----CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccc
Q 015463 142 TGD-LYIADAY----FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~-L~Vad~~----~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+++ |.++... ..|+.+|. +.....+.. ....+..+++.++|. +.++.+.
T Consensus 127 ~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~------------------- 181 (615)
T 1pgu_A 127 EGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSG-----HSQRINACHLKQSRPMRSMTVGD------------------- 181 (615)
T ss_dssp TSSEEEEEECCSSCSEEEEETTT-CCEEEECCS-----CSSCEEEEEECSSSSCEEEEEET-------------------
T ss_pred CCCEEEEeccCCCCccEEEEEEC-CCcceeeec-----CCccEEEEEECCCCCcEEEEEeC-------------------
Confidence 555 4444433 24666662 233333321 123477889999986 5554322
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCC----CcceEEEecC-CCEEEEEeCCCCeEEEEEeeCCCCcceeee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQ----FPNGLSLSKD-KSFFVFCEGSVGRLHKYWLIGEKAGNLEAF 290 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~----~~ngi~l~~d-~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~ 290 (406)
+|.+..||..+++......... ....+++++| ++.++... ..+.|..+++...+ ....+
T Consensus 182 -------------d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~ 245 (615)
T 1pgu_A 182 -------------DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG-SDRKISCFDGKSGE--FLKYI 245 (615)
T ss_dssp -------------TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE-TTCCEEEEETTTCC--EEEEC
T ss_pred -------------CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe-CCCeEEEEECCCCC--EeEEe
Confidence 4789999988776654443332 3568999999 88776554 45788888865321 11112
Q ss_pred -e---cCCCCCCceEECCCCCEEEEEcc
Q 015463 291 -A---ILPGYPDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 291 -~---~l~g~pd~i~~d~~G~lwv~~~~ 314 (406)
. .-.+....++++ +|.+.++...
T Consensus 246 ~~~~~~~~~~v~~~~~~-~~~~l~~~~~ 272 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWL-DSQKFATVGA 272 (615)
T ss_dssp CBTTBCCCSCEEEEEES-SSSEEEEEET
T ss_pred cccccccCCceEEEEEc-CCCEEEEEcC
Confidence 1 111223356677 7876665543
No 192
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.13 E-value=0.0015 Score=66.73 Aligned_cols=82 Identities=20% Similarity=0.178 Sum_probs=51.3
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE-EE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-YI 147 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L-~V 147 (406)
....++++.++|+.+.+++.|+.|..|+...-+.......... ......+.+.++++++ +|.+ ..
T Consensus 191 ~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~-------------~~~~h~~~V~~v~~sp-dg~~l~s 256 (611)
T 1nr0_A 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL-------------KNVAHSGSVFGLTWSP-DGTKIAS 256 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS-------------SSCSSSSCEEEEEECT-TSSEEEE
T ss_pred CceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc-------------cccccCCCEEEEEECC-CCCEEEE
Confidence 3457899999999888999999999998651111111100000 0001135578999999 6654 44
Q ss_pred EeCCCcEEEEeCCCCeE
Q 015463 148 ADAYFGLMKVGPEGGLA 164 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~ 164 (406)
+...+.|..+|..+++.
T Consensus 257 ~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKV 273 (611)
T ss_dssp EETTSEEEEEETTTTEE
T ss_pred EeCCCeEEEEeCCCCce
Confidence 55556688888877653
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.12 E-value=0.0048 Score=58.24 Aligned_cols=199 Identities=13% Similarity=0.122 Sum_probs=112.6
Q ss_pred eccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 63 KFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 63 ~~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
.+.+.-....++++.++|+.+.+++.||.|..|+.. ........ ..+.....+++.+
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~---------------------~~~~~v~~~~~sp- 116 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT---------------------MPCTWVMACAYAP- 116 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---------------------CSSSCCCEEEECT-
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe---------------------cCCCCEEEEEECC-
Confidence 345555566889999999989999999999999865 11111110 0123456889999
Q ss_pred CCcEEEEeCC-CcEEEEeCCCCeEEEcccccC--CcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCC
Q 015463 142 TGDLYIADAY-FGLMKVGPEGGLATSLATEAE--GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 142 ~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~--~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
+|.+.++... +.+..++.............. ......+..+.+.+++...++.+.
T Consensus 117 ~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---------------------- 174 (354)
T 2pbi_B 117 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG---------------------- 174 (354)
T ss_dssp TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET----------------------
T ss_pred CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC----------------------
Confidence 6766555444 445566543221000000000 001124567788888876665432
Q ss_pred CCCCCcccCCCCeEEEEeCCCCeEEEecccC-CCcceEEEecC--CCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCC
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d--~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
+|.+..+|.++++......+. .....++++++ ++.+ ++....+.|..+++...+ ....+..-.+
T Consensus 175 ----------D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l-~sgs~Dg~v~~wd~~~~~--~~~~~~~h~~ 241 (354)
T 2pbi_B 175 ----------DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF-VSGGCDKKAMVWDMRSGQ--CVQAFETHES 241 (354)
T ss_dssp ----------TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE-EEEETTSCEEEEETTTCC--EEEEECCCSS
T ss_pred ----------CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE-EEEeCCCeEEEEECCCCc--EEEEecCCCC
Confidence 477999999888764433332 23356777764 5555 444456788888865321 1112211112
Q ss_pred CCCceEECCCCCEEEEEccCCcc
Q 015463 296 YPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 296 ~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
....++++++|++.++......+
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCE
T ss_pred CeEEEEEeCCCCEEEEEeCCCeE
Confidence 23456778888877665544443
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0017 Score=63.33 Aligned_cols=156 Identities=8% Similarity=0.028 Sum_probs=97.5
Q ss_pred CcceEEEcCCCCee-EEEecCCEEEEEeCC-----ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 70 GPESMAFDPLGRGP-YTGVADGRILFWDGL-----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 70 gpe~i~~d~~g~~l-y~g~~~g~I~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
...+++++++|+.| +++..+|.|..|+.. ....+... .....+.++++++++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~---------------------~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF---------------------CFSKRPNAISIAEDDT 162 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE---------------------ECSSCEEEEEECTTSS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc---------------------cCCCCceEEEEcCCCC
Confidence 45789999999975 678889988888743 11222110 0124567899998444
Q ss_pred cEEEEeCCCcEEEEeCCCCeEEE-cccccCCcccccccceEEcCC---CCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 144 DLYIADAYFGLMKVGPEGGLATS-LATEAEGVPLRFTNDLDIDDE---GNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 144 ~L~Vad~~~gl~~~d~~~~~~~~-l~~~~~~~~~~~~~~l~~d~d---G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
.|++++..+.++.++..++.... ......+ ....+.++++.++ |.+.++.+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~----------------------- 218 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDR----------------------- 218 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEET-----------------------
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcC-----------------------
Confidence 56677666678889876654321 0000001 1234778899988 866666432
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEE-Eeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTT-VLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~-~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
++.|..||..+++.. .+..+ ......++++ |++.++.+. ..+.|..+++..
T Consensus 219 ---------d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~ 271 (450)
T 2vdu_B 219 ---------DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKT 271 (450)
T ss_dssp ---------TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTT
T ss_pred ---------CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCC
Confidence 367888888776543 32322 2345789999 998776554 467888888763
No 195
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.11 E-value=0.0011 Score=62.67 Aligned_cols=186 Identities=11% Similarity=0.072 Sum_probs=112.4
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-CC-cEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TG-DLYI 147 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-~g-~L~V 147 (406)
...++.+.+++..+++++.+|.|..|+...-..+..... + ......+.+.+. +| .|+.
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-------------------h-~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-------------------H-GADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-------------------C-SSCEEEEEECCCSSCCEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-------------------C-CCCeEEEEEEeCCCCCEEEE
Confidence 346788888888899999999999999762111111100 0 123455666542 33 4566
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.|..+|..+++....... ....++++++.++|.+.++.+.
T Consensus 216 gs~Dg~v~~wd~~~~~~~~~~~~----h~~~v~~v~~~p~~~~l~s~s~------------------------------- 260 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQAFET----HESDVNSVRYYPSGDAFASGSD------------------------------- 260 (354)
T ss_dssp EETTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEET-------------------------------
T ss_pred EeCCCeEEEEECCCCcEEEEecC----CCCCeEEEEEeCCCCEEEEEeC-------------------------------
Confidence 66667799999887764322111 1235788999999988777532
Q ss_pred CCCeEEEEeCCCCeEEEeccc---CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRN---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNE 304 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~---~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~ 304 (406)
++.+..||..+++....... ......++++++++.++... ..+.|..+++.... ....+..-.+....+++++
T Consensus 261 -D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 261 -DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY-NDYTINVWDVLKGS--RVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp -TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCS--EEEEECCCSSCEEEEEECT
T ss_pred -CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE-CCCcEEEEECCCCc--eEEEEECCCCcEEEEEECC
Confidence 46788889877654333221 12345788999998776654 45788888864211 1111111112233567888
Q ss_pred CCCEEEEEcc
Q 015463 305 KGEFWVAIHC 314 (406)
Q Consensus 305 ~G~lwv~~~~ 314 (406)
+|.+.++...
T Consensus 337 dg~~l~sgs~ 346 (354)
T 2pbi_B 337 DGTAFCSGSW 346 (354)
T ss_dssp TSSCEEEEET
T ss_pred CCCEEEEEcC
Confidence 9986666543
No 196
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.10 E-value=0.00058 Score=63.79 Aligned_cols=103 Identities=12% Similarity=-0.064 Sum_probs=65.4
Q ss_pred cceEEEcCC----CCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC-CCCcE
Q 015463 71 PESMAFDPL----GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDL 145 (406)
Q Consensus 71 pe~i~~d~~----g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~-~~g~L 145 (406)
..++++.++ |+.++++..+|.|..|+......+.... ........+++.+ +...|
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--------------------~~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV--------------------GHGNAINELKFHPRDPNLL 131 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE--------------------SCCSCEEEEEECSSCTTEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec--------------------CCCCcEEEEEECCCCCCEE
Confidence 467788877 6678999999999999876211111110 0124467889987 33445
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEe
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTD 194 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~ 194 (406)
+.+...+.|..+|.++++.........+ ....+.+++++++|+..++.
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 179 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIMSC 179 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEEEe
Confidence 6666667799999987765433211011 12357789999999877665
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.10 E-value=7.3e-05 Score=71.75 Aligned_cols=216 Identities=8% Similarity=-0.106 Sum_probs=113.8
Q ss_pred CcceEEEcCCCCeeEEEe----------cCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEe
Q 015463 70 GPESMAFDPLGRGPYTGV----------ADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFD 139 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~----------~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d 139 (406)
.| ++++++||+.+|++. .++.|..||....+.......... .-.....+|.+++++
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~-------------~~~~~g~~P~~ia~S 132 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA-------------PRFSVGPRVHIIGNC 132 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS-------------CSCCBSCCTTSEEEC
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc-------------cccccCCCcceEEEc
Confidence 58 899999999899986 357899999873332222110000 000123569999999
Q ss_pred CCCCcEEEEeCC--CcEEE--EeCCCCeEEEcccccCCcccccccc----eEEcCCCCEEEEeCCC-----c-hhh---h
Q 015463 140 KKTGDLYIADAY--FGLMK--VGPEGGLATSLATEAEGVPLRFTND----LDIDDEGNVYFTDSST-----N-YQR---R 202 (406)
Q Consensus 140 ~~~g~L~Vad~~--~gl~~--~d~~~~~~~~l~~~~~~~~~~~~~~----l~~d~dG~ly~t~~~~-----~-~~~---~ 202 (406)
+++..|||+... ..+.. +|+.+ +..+... +.....+.+ ++..++|.+.+-+... + ... .
T Consensus 133 pDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~--~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSA--SCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp TTSSCEEEEECSSSCEEEEEETTTEE--EEEEECS--SCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred CCCCEEEEEccCCCCeEEEEEEchhh--ceEEECC--CceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 965689999864 45667 78866 3333211 100011111 2333455433333221 0 000 0
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc----------cCCCcce---EEEecCCCEEEEEeC
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR----------NLQFPNG---LSLSKDKSFFVFCEG 269 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~----------~~~~~ng---i~l~~d~~~l~v~~t 269 (406)
.+.....+. . . .+...++.... +.++.+|..++..+.... ....|.| +++++|++.+|++..
T Consensus 209 ~i~vg~~P~-~--~-~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~ 283 (368)
T 1mda_H 209 AQNCSSQAA-Q--A-NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTV 283 (368)
T ss_dssp TSCBCSCCE-E--E-TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred eeeCCCCcc-c--c-ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEec
Confidence 000000000 0 0 01111111222 678888886543332211 1112344 889999999999754
Q ss_pred ---C-----CCeEEEEEeeCCCCcceeeee--cCCCCCCceEECCCCC-EEEEEc
Q 015463 270 ---S-----VGRLHKYWLIGEKAGNLEAFA--ILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 270 ---~-----~~~i~~~~~~g~~~~~~~~~~--~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
. ...+..++++.. ++.. ...+.|.++++++||+ +|++..
T Consensus 284 ~~~~~~~~~~~~~~ViD~~t~-----~vv~~i~vg~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 284 EHSRSCLAAAENTSSVTASVG-----QTSGPISNGHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp ECSSCTTSCEEEEEEEESSSC-----CEEECCEEEEEECEEEECCSSSCEEEEEE
T ss_pred cccCcccccCCCEEEEECCCC-----eEEEEEECCCCcceEEECCCCCEEEEEcc
Confidence 2 246778886532 2222 2334699999999997 899887
No 198
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.10 E-value=0.0013 Score=62.51 Aligned_cols=192 Identities=10% Similarity=-0.044 Sum_probs=106.5
Q ss_pred eccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCcee------EEEeecCCCccccCCCCCcccccccCCcCCcceEE
Q 015463 63 KFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWT------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL 136 (406)
Q Consensus 63 ~~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 136 (406)
.+.+.-....++++++ +.+++++.+|.|..|+..... ..... .........+
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--------------------~~h~~~v~~~ 68 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH--------------------FVHKSGLHHV 68 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE--------------------ECCTTCEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEE--------------------ecCCCcEEEE
Confidence 3344444557888877 568999999999999876111 11100 0112335788
Q ss_pred EEeCCC----C---c-EEEEeCCCcEEEEeCCCCe------EEEcccccCCcccccccceEEc----CCCCE-EEEeCCC
Q 015463 137 RFDKKT----G---D-LYIADAYFGLMKVGPEGGL------ATSLATEAEGVPLRFTNDLDID----DEGNV-YFTDSST 197 (406)
Q Consensus 137 ~~d~~~----g---~-L~Vad~~~gl~~~d~~~~~------~~~l~~~~~~~~~~~~~~l~~d----~dG~l-y~t~~~~ 197 (406)
++.+ + + + |+.+...+.|..++.++++ ...+...........+.++++. ++|.. +++.+.
T Consensus 69 ~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~- 146 (397)
T 1sq9_A 69 DVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV- 146 (397)
T ss_dssp EEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-
T ss_pred EEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-
Confidence 8988 5 6 4 4555555668888876655 3332211000002457788998 88876 655422
Q ss_pred chhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCC------Ce-EE-----Eec-------ccCCCcceEEEe
Q 015463 198 NYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTT------KQ-TT-----VLL-------RNLQFPNGLSLS 258 (406)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t------~~-~~-----~~~-------~~~~~~ngi~l~ 258 (406)
+|.|..||..+ ++ .. .+. ........++++
T Consensus 147 -------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 195 (397)
T 1sq9_A 147 -------------------------------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS 195 (397)
T ss_dssp -------------------------------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC
T ss_pred -------------------------------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEEC
Confidence 36677777665 22 11 221 123345789999
Q ss_pred cCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec---C---CCCCCceEECCCCCEEEEEc
Q 015463 259 KDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI---L---PGYPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 259 ~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~---l---~g~pd~i~~d~~G~lwv~~~ 313 (406)
+++ .+ ++....+.|..|++...+ ....+.. - .+....++++++|++.++..
T Consensus 196 ~~~-~l-~~~~~dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 196 ERG-LI-ATGFNNGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp TTS-EE-EEECTTSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred CCc-eE-EEEeCCCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 999 44 555667889998875321 1111211 1 22334577888888655543
No 199
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.09 E-value=0.0002 Score=69.13 Aligned_cols=146 Identities=10% Similarity=-0.004 Sum_probs=84.7
Q ss_pred EcCCCCeeEEEecCCEEEEEeCC----ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC-CCCcEEEEeC
Q 015463 76 FDPLGRGPYTGVADGRILFWDGL----KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDLYIADA 150 (406)
Q Consensus 76 ~d~~g~~ly~g~~~g~I~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~-~~g~L~Vad~ 150 (406)
.|.++. ||+|+..| +++++.+ .|+.+.... .......|++|+ +.++||++..
T Consensus 19 ~d~~g~-l~vgt~~G-l~~~~~~~~g~~W~~~~~~~---------------------~~~~v~~i~~dp~~~~~l~~g~~ 75 (394)
T 3b7f_A 19 ESGPVM-LLVATIKG-AWFLASDPARRTWELRGPVF---------------------LGHTIHHIVQDPREPERMLMAAR 75 (394)
T ss_dssp CCSCCE-EEEEETTE-EEEEEECTTSCSEEEEEEES---------------------TTSEEEEEEECSSSTTCEEEEEE
T ss_pred CCCCCE-EEEEecCc-eEEEECCCCCCCceECCccC---------------------CCCceEEEEECCCCCCeEEEEec
Confidence 445666 99999876 7777532 455442110 123467889986 3578999987
Q ss_pred CC----cEEEEeCCCCeEEEccccc--CCc-------ccccccceEEcC---CCCEEEEeCCCchhhhcccccccccccc
Q 015463 151 YF----GLMKVGPEGGLATSLATEA--EGV-------PLRFTNDLDIDD---EGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 151 ~~----gl~~~d~~~~~~~~l~~~~--~~~-------~~~~~~~l~~d~---dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
.. +|++.+..+...+.+.... ... ....+..|++++ .+.+|++...
T Consensus 76 ~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~------------------ 137 (394)
T 3b7f_A 76 TGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP------------------ 137 (394)
T ss_dssp C--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET------------------
T ss_pred CCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC------------------
Confidence 65 7998876555555543221 111 112345678885 6789997632
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEeccc-----------------CC--CcceEEEec-CCCEEEEEeCCCCeE
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRN-----------------LQ--FPNGLSLSK-DKSFFVFCEGSVGRL 274 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-----------------~~--~~ngi~l~~-d~~~l~v~~t~~~~i 274 (406)
++|++.+..+...+.+... .. ....|++++ +.+.+|+... .+.|
T Consensus 138 ---------------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl 201 (394)
T 3b7f_A 138 ---------------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGV 201 (394)
T ss_dssp ---------------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEE
T ss_pred ---------------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCE
Confidence 5788887765555554311 00 113566766 3456777643 3567
Q ss_pred EEEE
Q 015463 275 HKYW 278 (406)
Q Consensus 275 ~~~~ 278 (406)
++..
T Consensus 202 ~~s~ 205 (394)
T 3b7f_A 202 FEST 205 (394)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7664
No 200
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.09 E-value=0.0016 Score=62.41 Aligned_cols=198 Identities=12% Similarity=0.139 Sum_probs=119.7
Q ss_pred cccCcceEEEcCCCCeeEE-Eec---------------CCEEEEEeCCce--e---EEEeecCCCccccCCCCCcccccc
Q 015463 67 QIQGPESMAFDPLGRGPYT-GVA---------------DGRILFWDGLKW--T---DFAFTSNNRSELCNPKPIATSYLK 125 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~-g~~---------------~g~I~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~ 125 (406)
.+...-++.+|+.|+ ||+ ++. .-+|+.+|...- + .+.... .
T Consensus 85 ~lvsV~~v~iD~~~r-LWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~-----------------~ 146 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRR-LWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPT-----------------R 146 (381)
T ss_dssp SSSCEEEEEECTTCE-EEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCG-----------------G
T ss_pred ceEEeeEEEEcCCCc-EEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCH-----------------H
Confidence 577888999999888 554 432 125677765511 1 221111 0
Q ss_pred cCCcCCcceEEEEe-CC------CCcEEEEeCC-CcEEEEeCCCCeEEEcccc-----------cCCccc---ccccceE
Q 015463 126 NEHICGRPLGLRFD-KK------TGDLYIADAY-FGLMKVGPEGGLATSLATE-----------AEGVPL---RFTNDLD 183 (406)
Q Consensus 126 ~~~~~~~p~gi~~d-~~------~g~L~Vad~~-~gl~~~d~~~~~~~~l~~~-----------~~~~~~---~~~~~l~ 183 (406)
..........|++| .+ ++..||+|.. .||..+|..+++...+... ..|.++ ..+.+|+
T Consensus 147 ~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIa 226 (381)
T 3q6k_A 147 LVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGIT 226 (381)
T ss_dssp GCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEE
T ss_pred hcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEE
Confidence 00112345688888 31 4568999986 7899999998876655421 112222 2567788
Q ss_pred EcCC----C-CEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeC------C-CCeEEEecccCCC
Q 015463 184 IDDE----G-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDP------T-TKQTTVLLRNLQF 251 (406)
Q Consensus 184 ~d~d----G-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~------~-t~~~~~~~~~~~~ 251 (406)
.+++ + .||+...++ -++|++.. . ...++.+.+....
T Consensus 227 Lsp~~~~~~~~LYf~plss--------------------------------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~ 274 (381)
T 3q6k_A 227 LGDRDSEGNRPAYYLAGSA--------------------------------IKVYSVNTKELKQKGGKLNPELLGNRGKY 274 (381)
T ss_dssp ECCCCTTSCCEEEEEESSC--------------------------------SEEEEEEHHHHSSTTCCCCCEEEEECCTT
T ss_pred ecCCcCCCCeEEEEEECCC--------------------------------CcEEEEEHHHhhCcchhhceEEeeecCCC
Confidence 8775 3 688886542 12444321 0 1334444333222
Q ss_pred cce--EEEecCCCEEEEEeCCCCeEEEEEeeC-C-CCcceeeeec--CCCCCCceEECCCCCEEEEEcc
Q 015463 252 PNG--LSLSKDKSFFVFCEGSVGRLHKYWLIG-E-KAGNLEAFAI--LPGYPDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 252 ~ng--i~l~~d~~~l~v~~t~~~~i~~~~~~g-~-~~~~~~~~~~--l~g~pd~i~~d~~G~lwv~~~~ 314 (406)
..| .++++....+|+++...+.|.+++..+ + +.++.+++.. .--+|+++.+|.+|.||+..+.
T Consensus 275 s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 275 NDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 344 456533457999999999999999775 3 1244555553 2246999999999999999865
No 201
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.07 E-value=0.0061 Score=57.01 Aligned_cols=195 Identities=8% Similarity=-0.021 Sum_probs=110.3
Q ss_pred cCcccCcceEEE-----cC-CCCeeEEEecCCEEEEEeCC-c-----e-eEEEeecCCCccccCCCCCcccccccCCcCC
Q 015463 65 LNQIQGPESMAF-----DP-LGRGPYTGVADGRILFWDGL-K-----W-TDFAFTSNNRSELCNPKPIATSYLKNEHICG 131 (406)
Q Consensus 65 ~~~~~gpe~i~~-----d~-~g~~ly~g~~~g~I~~~~~~-~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (406)
.+.-....++++ .+ +++.+.+++.|+.|..|+.. . . ..... ......
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~--------------------l~~h~~ 77 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKA--------------------LTGHNH 77 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEE--------------------ECCCSS
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccch--------------------hccCCC
Confidence 344444567777 55 78889999999999998754 1 0 01100 011123
Q ss_pred cceEEEEeCCCCcEE-EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccc
Q 015463 132 RPLGLRFDKKTGDLY-IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIP 210 (406)
Q Consensus 132 ~p~gi~~d~~~g~L~-Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~ 210 (406)
....+++.+ ++.+. .+...+.|..+|.++++........ ...+.++++.++|+..++.+.
T Consensus 78 ~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~~~-------------- 138 (343)
T 2xzm_R 78 FVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH----QSEVYSVAFSPDNRQILSAGA-------------- 138 (343)
T ss_dssp CEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECC----CSCEEEEEECSSTTEEEEEET--------------
T ss_pred ceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC----CCcEEEEEECCCCCEEEEEcC--------------
Confidence 456889998 66654 4554566888998877543211111 124778999999987776432
Q ss_pred ccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecc---cCCCcceEEEecCCC---------EEEEEeCCCCeEEEEE
Q 015463 211 LQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR---NLQFPNGLSLSKDKS---------FFVFCEGSVGRLHKYW 278 (406)
Q Consensus 211 ~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~---~~~~~ngi~l~~d~~---------~l~v~~t~~~~i~~~~ 278 (406)
++.+..+|........... .......+++++++. .++++....+.|..++
T Consensus 139 ------------------d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 139 ------------------EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp ------------------TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred ------------------CCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 3668888876443332221 112235677888762 2344444567787777
Q ss_pred eeCCCCcceeeeecCCCCCCceEECCCCCEEEEEccCCcch
Q 015463 279 LIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLY 319 (406)
Q Consensus 279 ~~g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~~~ 319 (406)
..+ .....+..-.+....++++++|++.++......+.
T Consensus 201 ~~~---~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 201 TNF---QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp TTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCC---ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 321 11111211122234567889998776655444443
No 202
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.05 E-value=0.0042 Score=68.59 Aligned_cols=192 Identities=11% Similarity=0.013 Sum_probs=116.5
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.+......+++++++|+.+.+++.+|.|..|+......+.... ...+....+++++ +|+
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~--------------------~h~~~v~~~~~s~-~~~ 670 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK--------------------AHEDEVLCCAFSS-DDS 670 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------------------CCSSCEEEEEECT-TSS
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec--------------------cCCCCEEEEEEec-CCC
Confidence 3444556788999999988899999999999976222221111 1134467899998 555
Q ss_pred -EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeCCCchhhhccccccccccccccCCCCC
Q 015463 145 -LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPS 221 (406)
Q Consensus 145 -L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (406)
|..+...+.|..+|..+++........ ...+..+++.++ +.+.++.+
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~sg~-------------------------- 720 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVHTYDEH----SEQVNCCHFTNKSNHLLLATGS-------------------------- 720 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSCCEEEEEE--------------------------
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcCC----CCcEEEEEEecCCCceEEEEEe--------------------------
Confidence 555555567999999887643322211 124667788774 34544432
Q ss_pred CCcccCCCCeEEEEeCCCCeEEEeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceee----ee-----
Q 015463 222 PIKITKDTGRVLKYDPTTKQTTVLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEA----FA----- 291 (406)
Q Consensus 222 ~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~----~~----- 291 (406)
.+|.+..||..+++......+ ....+.+++++|++.++.+. ..+.|..+++...+....-. +.
T Consensus 721 ------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 793 (1249)
T 3sfz_A 721 ------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-ADGTLRLWDVRSANERKSINVKRFFLSSEDP 793 (1249)
T ss_dssp ------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE-SSSEEEEEEGGGTEEEEEEECCCCC------
T ss_pred ------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE-CCCeEEEEeCCCCcccceecccccccccCCc
Confidence 247799999988875544333 23456889999998775554 45788888876321110000 00
Q ss_pred --cCCCCCCceEECCCCCEEEEEcc
Q 015463 292 --ILPGYPDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 292 --~l~g~pd~i~~d~~G~lwv~~~~ 314 (406)
........++++++|...++...
T Consensus 794 ~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 794 PEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp --CCCCCBCCCCBCTTSSEEEEEET
T ss_pred cccccceEEEEEECCCCCEEEEEcC
Confidence 00112345667888886666543
No 203
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.05 E-value=0.0012 Score=61.33 Aligned_cols=190 Identities=11% Similarity=0.013 Sum_probs=108.0
Q ss_pred CcceEEEcCC---CCeeEEEecCCEEEEEeCCcee-EEEeecCCCccccCCCCCcccccccCCcCCcceEEE------Ee
Q 015463 70 GPESMAFDPL---GRGPYTGVADGRILFWDGLKWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR------FD 139 (406)
Q Consensus 70 gpe~i~~d~~---g~~ly~g~~~g~I~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~------~d 139 (406)
...++++.++ |+.++++..+|.|..|+..... ...... ........+. ++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~s 126 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK--------------------GHKEIINAIDGIGGLGIG 126 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC--------------------CCSSCEEEEEEESGGGCC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE--------------------ecccceEEEeeccccccC
Confidence 4477888887 6878999999999999876111 111100 0112344553 34
Q ss_pred CCCCcEEEEeCCCcEEEEeCCCCe--EEEcccccCCcccccccceE----EcCCCCEEEEeCCCchhhhccccccccccc
Q 015463 140 KKTGDLYIADAYFGLMKVGPEGGL--ATSLATEAEGVPLRFTNDLD----IDDEGNVYFTDSSTNYQRRQMQKENIPLQL 213 (406)
Q Consensus 140 ~~~g~L~Vad~~~gl~~~d~~~~~--~~~l~~~~~~~~~~~~~~l~----~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~ 213 (406)
+++..|+.+...+.|..+|..+++ ...+.. ..+.....+.+++ +.++|++.++.+.
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----------------- 188 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGYD----------------- 188 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------
Confidence 523345556555678899987664 222211 1121122345555 5678877666432
Q ss_pred cccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEec---CCCEEEEEeCCCCeEEEEEeeCCCCcceeee
Q 015463 214 CSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK---DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF 290 (406)
Q Consensus 214 ~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~---d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~ 290 (406)
+|.|..||..+++.............++++| +++.++.+. ..+.|..|++...+.-..-.+
T Consensus 189 ---------------d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 189 ---------------NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp ---------------TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEEEEEETTTEEEE
T ss_pred ---------------CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCCcccceee
Confidence 4789999999887655443344567899999 888776664 467888888764221111111
Q ss_pred e---cCCCCCCceEECCCCC-EEEEEc
Q 015463 291 A---ILPGYPDNVRTNEKGE-FWVAIH 313 (406)
Q Consensus 291 ~---~l~g~pd~i~~d~~G~-lwv~~~ 313 (406)
. .-.+....+++.++|. +.++..
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEe
Confidence 0 1122234466778887 444433
No 204
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.04 E-value=0.0032 Score=58.97 Aligned_cols=189 Identities=12% Similarity=0.021 Sum_probs=109.0
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD- 144 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~- 144 (406)
+.-....++++.+++..+.+++.++.|..|+...-+.+.... ...+....+++.+ +++
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~--------------------~h~~~v~~v~~sp-~~~~ 132 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV--------------------GHQSEVYSVAFSP-DNRQ 132 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE--------------------CCCSCEEEEEECS-STTE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc--------------------CCCCcEEEEEECC-CCCE
Confidence 333445788999999988899999999999976211111110 0123467899998 554
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC----------CEEEEeCCCchhhhcccccccccccc
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG----------NVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG----------~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
|..+...+.|..+|..+......... ......+..+++.+++ .+.++.
T Consensus 133 l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~-------------------- 190 (343)
T 2xzm_R 133 ILSAGAEREIKLWNILGECKFSSAEK--ENHSDWVSCVRYSPIMKSANKVQPFAPYFASV-------------------- 190 (343)
T ss_dssp EEEEETTSCEEEEESSSCEEEECCTT--TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE--------------------
T ss_pred EEEEcCCCEEEEEeccCCceeeeecc--cCCCceeeeeeeccccccccccCCCCCEEEEE--------------------
Confidence 55566566788898875443322211 0112245667776665 333332
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCC
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILP 294 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~ 294 (406)
..+|.|..||........+.......+.++++||++.+... ...+.|..+++...... ...+. ..
T Consensus 191 ------------~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~~-~~~~~-~~ 255 (343)
T 2xzm_R 191 ------------GWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATG-GKDKKLLIWDILNLTYP-QREFD-AG 255 (343)
T ss_dssp ------------ETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTCEEEEEESSCCSSC-SEEEE-CS
T ss_pred ------------cCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEE-cCCCeEEEEECCCCccc-ceeec-CC
Confidence 22478888885533222332223345789999999876554 44678888887321111 11111 11
Q ss_pred CCCCceEECCCCCEEEEE
Q 015463 295 GYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 295 g~pd~i~~d~~G~lwv~~ 312 (406)
.....++++++|.+.++.
T Consensus 256 ~~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 256 STINQIAFNPKLQWVAVG 273 (343)
T ss_dssp SCEEEEEECSSSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEE
Confidence 223457788888755443
No 205
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.03 E-value=0.0014 Score=60.20 Aligned_cols=80 Identities=10% Similarity=-0.071 Sum_probs=51.5
Q ss_pred eccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-c---eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 63 KFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-K---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 63 ~~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
++.+.-....+++++++|+.+.++..+|.|..|+.. . .+..... .........+++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------------~~~~~~v~~~~~ 65 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW--------------------RAHDSSIVAIDW 65 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE--------------------ECCSSCEEEEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee--------------------ccCCCcEEEEEE
Confidence 334444566889999999989999999999999855 1 1111111 111244678888
Q ss_pred eCC--CCcEEEEeCCCcEEEEeCCCC
Q 015463 139 DKK--TGDLYIADAYFGLMKVGPEGG 162 (406)
Q Consensus 139 d~~--~g~L~Vad~~~gl~~~d~~~~ 162 (406)
.+. +..|..+...+.|..+|.+++
T Consensus 66 ~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 66 ASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp CCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred cCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 862 334555555566888887765
No 206
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.02 E-value=0.0075 Score=58.66 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=101.7
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCC
Q 015463 73 SMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYF 152 (406)
Q Consensus 73 ~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~ 152 (406)
++.+ +++.+++++.+|.|..|+....+...... ...+....+++.+ ++.|..+...+
T Consensus 127 ~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~--------------------~h~~~V~~l~~~~-~~~l~s~s~dg 183 (464)
T 3v7d_B 127 CLQF--EDNYVITGADDKMIRVYDSINKKFLLQLS--------------------GHDGGVWALKYAH-GGILVSGSTDR 183 (464)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECS-TTEEEEEETTS
T ss_pred EEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEe--------------------CCCcCEEEEEEcC-CCEEEEEeCCC
Confidence 4444 45679999999999999976222221111 1124467888987 67777777777
Q ss_pred cEEEEeCCCCeEEEcccccCCcccccccceEEc--CCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCC
Q 015463 153 GLMKVGPEGGLATSLATEAEGVPLRFTNDLDID--DEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTG 230 (406)
Q Consensus 153 gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d--~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g 230 (406)
.|..+|.++++........ ...+..+++. +++.+.++.+. +|
T Consensus 184 ~i~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~~l~s~s~--------------------------------d~ 227 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGH----NSTVRCLDIVEYKNIKYIVTGSR--------------------------------DN 227 (464)
T ss_dssp CEEEEETTTTEEEEEECCC----SSCEEEEEEEESSSCEEEEEEET--------------------------------TS
T ss_pred CEEEEECCCCcEEEEECCC----CCccEEEEEecCCCCCEEEEEcC--------------------------------CC
Confidence 8999999887643322111 1235556655 46655555432 35
Q ss_pred eEEEEeCCCCeEEE-----------------------ecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcce
Q 015463 231 RVLKYDPTTKQTTV-----------------------LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNL 287 (406)
Q Consensus 231 ~l~~~d~~t~~~~~-----------------------~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~ 287 (406)
.+..+|..+++... ...+ ....-.+++++++.++... ..+.|..+++...+ ..
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~--~~ 303 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG-HMASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMK--CL 303 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC-CSSCEEEEEEETTEEEEEE-TTSCEEEEETTTTE--EE
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC-ccceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--EE
Confidence 56666666543211 1111 1122345677888776654 45788888865211 11
Q ss_pred eeeecCCCCCCceEECCCCCEEEEEccCCcc
Q 015463 288 EAFAILPGYPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 288 ~~~~~l~g~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
..+..-.+....++++++|+..++......+
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 1111111223346678888866665544433
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.02 E-value=0.00012 Score=69.39 Aligned_cols=190 Identities=6% Similarity=-0.024 Sum_probs=106.8
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
....++++.++|+.+.+++.+|.|..|+.. . +..... ..........+++.+++..|
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~--------------------~~~~~~~v~~~~~~~~~~~l 115 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV--------------------LLRLNRAATFVRWSPNEDKF 115 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE--------------------CCCCSSCEEEEECCTTSSCC
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE--------------------ecccCCceEEEEECCCCCEE
Confidence 345788999999988999999999999865 2 111111 11113446788998833456
Q ss_pred EEEeCCCcEEEEeCCCCe----EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCC
Q 015463 146 YIADAYFGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPS 221 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~----~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (406)
+.+...+.|..+|.++++ ...+. +.....+.++++.++|++.++.+.
T Consensus 116 ~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~~~~~------------------------- 166 (377)
T 3dwl_C 116 AVGSGARVISVCYFEQENDWWVSKHLK----RPLRSTILSLDWHPNNVLLAAGCA------------------------- 166 (377)
T ss_dssp EEEESSSCEEECCC-----CCCCEEEC----SSCCSCEEEEEECTTSSEEEEEES-------------------------
T ss_pred EEEecCCeEEEEEECCcccceeeeEee----cccCCCeEEEEEcCCCCEEEEEeC-------------------------
Confidence 666666678888887664 22222 111235778999999987766432
Q ss_pred CCcccCCCCeEEEEeCCCC------------------eEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCC
Q 015463 222 PIKITKDTGRVLKYDPTTK------------------QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK 283 (406)
Q Consensus 222 ~~~~~~~~g~l~~~d~~t~------------------~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~ 283 (406)
+|.+..||..++ +.............++++||++.++.+. ..+.|..+++...+
T Consensus 167 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 167 -------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPSAPE 238 (377)
T ss_dssp -------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEECSTT
T ss_pred -------CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECCCCC
Confidence 355777775422 1111111122346789999998776654 45788888876432
Q ss_pred Ccc--eeeeecCCCCCCceEECCCCCEEEEEccC
Q 015463 284 AGN--LEAFAILPGYPDNVRTNEKGEFWVAIHCR 315 (406)
Q Consensus 284 ~~~--~~~~~~l~g~pd~i~~d~~G~lwv~~~~~ 315 (406)
... ...+..-.+....++++++|.+.++....
T Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 239 QPPRALITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp SCEEECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 210 11111111223456777888876665443
No 208
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.99 E-value=0.0049 Score=58.98 Aligned_cols=205 Identities=14% Similarity=-0.019 Sum_probs=113.4
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--ce-eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-E
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-L 145 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L 145 (406)
...++++.++|+.+.++. ++.+..|+.. .. ..+............. .. ............+++.+ +|+ |
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~--~~---~~~~~~~~~v~~v~~s~-dg~~l 138 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENL--NT---SSSPSSDLYIRSVCFSP-DGKFL 138 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC----------------------CCCCBEEEEEECT-TSSEE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccc--cc---cccCCCceeEEEEEECC-CCCEE
Confidence 446899999999666665 5678778755 21 1111100000000000 00 00000011246789998 565 4
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
..+...+.|..+|.++++........ ...+.++++.++|...++.+.
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~----------------------------- 185 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGH----EQDIYSLDYFPSGDKLVSGSG----------------------------- 185 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------------------
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccC----CCCEEEEEEcCCCCEEEEecC-----------------------------
Confidence 55555567889999887654322211 124678999999987776532
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeCCCCcceeeee----cCCCC---C
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA----ILPGY---P 297 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~----~l~g~---p 297 (406)
++.+..||..+++.............+++++ |++.+... ...+.|..+++..... ...+. ...+. .
T Consensus 186 ---d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 186 ---DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGFL--VERLDSENESGTGHKDSV 259 (393)
T ss_dssp ---TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCCE--EEEEC------CCCSSCE
T ss_pred ---CCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCcE--EEeecccccCCCCCCCCE
Confidence 4779999998887654443334456788888 77766544 4457788887653211 11111 01122 2
Q ss_pred CceEECCCCCEEEEEccCCcchh
Q 015463 298 DNVRTNEKGEFWVAIHCRRSLYS 320 (406)
Q Consensus 298 d~i~~d~~G~lwv~~~~~~~~~~ 320 (406)
..++++++|.+.++....+.+..
T Consensus 260 ~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp EEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEE
Confidence 34678889987776655444433
No 209
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00061 Score=62.18 Aligned_cols=150 Identities=9% Similarity=-0.043 Sum_probs=100.5
Q ss_pred CcceEEEcC-CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 70 GPESMAFDP-LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 70 gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
...++.+.+ +++.+++++.+|.|..|+.. ....+.. ........+++.+ ++.+++
T Consensus 144 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------------------~~~~~i~~~~~~~-~~~~~~ 200 (313)
T 3odt_A 144 SVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSG----------------------IHNDVVRHLAVVD-DGHFIS 200 (313)
T ss_dssp CEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECS----------------------SCSSCEEEEEEEE-TTEEEE
T ss_pred ceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEec----------------------cCcccEEEEEEcC-CCeEEE
Confidence 345666665 78888999999999999855 2222210 0123466788988 778888
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
+...+.|..+|..+++........ ...+..+++.++|.++.+..
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~~~~~-------------------------------- 244 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEGH----ESFVYCIKLLPNGDIVSCGE-------------------------------- 244 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECTTSCEEEEET--------------------------------
T ss_pred ccCCCeEEEEECCchhhhhhhhcC----CceEEEEEEecCCCEEEEec--------------------------------
Confidence 877778999998876543222111 23477899999997665543
Q ss_pred CCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..||..+++........ .....+++++|++. +.+ ...+.|..|++..
T Consensus 245 -dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~dg~i~iw~~~~ 296 (313)
T 3odt_A 245 -DRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI-IVG-SSDNLVRIFSQEK 296 (313)
T ss_dssp -TSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE-EEE-ETTSCEEEEESCG
T ss_pred -CCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE-EEE-eCCCcEEEEeCCC
Confidence 378999999888755443332 34568999999983 333 4467888888764
No 210
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.97 E-value=0.0014 Score=63.39 Aligned_cols=204 Identities=11% Similarity=0.131 Sum_probs=111.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCcee-----------EEEeecCCCccccCCCCCcccccccCCcCCcceEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWT-----------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR 137 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 137 (406)
....+++++++|+.|.+|+.+|.|..|+..... ..........+ -.+............++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE--------FDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCE--------EEGGGTEEECCCCCEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccc--------ccccccccccCceEEEE
Confidence 345788999999988999999999999865111 11111000000 00000000014467899
Q ss_pred EeCCC--CcEEEEeCCCcEEEEeCCCCeEEEcc-c-----------------------------------ccCCcccccc
Q 015463 138 FDKKT--GDLYIADAYFGLMKVGPEGGLATSLA-T-----------------------------------EAEGVPLRFT 179 (406)
Q Consensus 138 ~d~~~--g~L~Vad~~~gl~~~d~~~~~~~~l~-~-----------------------------------~~~~~~~~~~ 179 (406)
+.+++ ..|..+...+.|..++..++...... . .........+
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99832 24666665566777776543321000 0 0000112346
Q ss_pred cceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC-eEEEe-------c-ccCC
Q 015463 180 NDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK-QTTVL-------L-RNLQ 250 (406)
Q Consensus 180 ~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~-------~-~~~~ 250 (406)
.++++.++|+++++. . +|.|..||..+. +.... . ..-.
T Consensus 181 ~~~~~~~~~~~l~s~-~--------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (447)
T 3dw8_B 181 NSISINSDYETYLSA-D--------------------------------DLRINLWHLEITDRSFNIVDIKPANMEELTE 227 (447)
T ss_dssp CEEEECTTSSEEEEE-C--------------------------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCC
T ss_pred EEEEEcCCCCEEEEe-C--------------------------------CCeEEEEECCCCCceeeeeecccccccccCc
Confidence 788888998877764 2 477888988732 22221 1 1122
Q ss_pred CcceEEEecCC-CEEEEEeCCCCeEEEEEeeCCCCc--ceeeeecCC------------CCCCceEECCCCCEEEEEcc
Q 015463 251 FPNGLSLSKDK-SFFVFCEGSVGRLHKYWLIGEKAG--NLEAFAILP------------GYPDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 251 ~~ngi~l~~d~-~~l~v~~t~~~~i~~~~~~g~~~~--~~~~~~~l~------------g~pd~i~~d~~G~lwv~~~~ 314 (406)
....++++|++ +.++. ....+.|..+++...+.. ....+..-. +....++++++|++.++...
T Consensus 228 ~v~~~~~~p~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVY-SSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CEEEEEECSSCTTEEEE-EETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred ceEEEEECCCCCcEEEE-EeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 34678999998 65544 445678888887643211 012232111 12345778899997776555
No 211
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.97 E-value=0.00066 Score=66.05 Aligned_cols=205 Identities=14% Similarity=0.090 Sum_probs=115.3
Q ss_pred cCcceEEEcCC-CCeeEEEecCCEEEEEeCCce-eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc--
Q 015463 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGLKW-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-- 144 (406)
Q Consensus 69 ~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-- 144 (406)
..+.++++.++ ++++++++.+|.|..|+.... ... .. ...+.. ..........+.++++++ ++.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~---~~--~~~~~~------~~~~~~h~~~v~~l~~~~-~~~~~ 196 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP---EP--SGECQP------DLRLRGHQKEGYGLSWNP-NLNGY 196 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC---CT--TCCCCC------SEEEECCSSCCCCEEECT-TSTTE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc---Cc--cccCCC------cEEecCCCCCeEEEEeCC-CCCCe
Confidence 45788999987 667888899999998875410 000 00 000000 000111134467899998 444
Q ss_pred EEEEeCCCcEEEEeCCCCeE----EEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 145 LYIADAYFGLMKVGPEGGLA----TSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~----~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
|..+...+.|..++..++.. ........+ ....+.++++.+ +++++++.+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~----------------------- 252 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD----------------------- 252 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------------
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------------
Confidence 55555556688888876321 000011111 123477889988 5677766532
Q ss_pred CCCCcccCCCCeEEEEeCCCCe----EEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCC
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQ----TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~----~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
+|.|..||..++. ...+...-...+.++++++++.++++....+.|..|++..... ....+..-.+
T Consensus 253 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h~~ 322 (430)
T 2xyi_A 253 ---------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFESHKD 322 (430)
T ss_dssp ---------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEECCSS
T ss_pred ---------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecCCC
Confidence 4789999988652 2223222344678999999987666666678899998763211 1122221222
Q ss_pred CCCceEECCCCC-EEEEEccCCcch
Q 015463 296 YPDNVRTNEKGE-FWVAIHCRRSLY 319 (406)
Q Consensus 296 ~pd~i~~d~~G~-lwv~~~~~~~~~ 319 (406)
....++++++|. ++++....+.+.
T Consensus 323 ~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 323 EIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCCE
T ss_pred CEEEEEECCCCCCEEEEEeCCCcEE
Confidence 334567888885 555554443433
No 212
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.95 E-value=0.0018 Score=60.19 Aligned_cols=136 Identities=10% Similarity=0.160 Sum_probs=84.8
Q ss_pred CCCeeEEEe--cCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCC---
Q 015463 79 LGRGPYTGV--ADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAY--- 151 (406)
Q Consensus 79 ~g~~ly~g~--~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~--- 151 (406)
+|..+|... .+++|++++.+ ..+.+.. ..+.-|..+ ++.||.+...
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-------------------------~~~~~i~~~--g~~Iyy~~~~~~~ 76 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-------------------------DTAMYINAD--KNYVYYVRNNNQK 76 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-------------------------EEEEEEEEC--SSEEEEEEECC--
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccC-------------------------CceeeEEEc--CCEEEEEECCCCc
Confidence 344467664 26889999877 3333321 112334443 4566655432
Q ss_pred -----------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCC
Q 015463 152 -----------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDP 220 (406)
Q Consensus 152 -----------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (406)
..|++++.++++.+.+... . .+.+.++ ++.||+++.+
T Consensus 77 ~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-~------~~~~s~~-g~~Iy~~~~~------------------------ 124 (302)
T 3s25_A 77 ITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-P------CIYASLI-GNYIYYLHYD------------------------ 124 (302)
T ss_dssp ----CCSSCCSEEEEEEETTSCCCEEEECS-C------EEEEEEE-TTEEEEEEES------------------------
T ss_pred ccccceeccCCCeEEEEeCCCCcceEeecC-C------ccEEEEe-CCEEEEEeec------------------------
Confidence 3699999998876655432 1 1233443 4589998721
Q ss_pred CCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCC
Q 015463 221 SPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE 282 (406)
Q Consensus 221 ~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~ 282 (406)
......|++.+.++...+.+..... .+++++++.+|+++.....|++.+++|.
T Consensus 125 -----~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 125 -----TQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp -----SSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred -----CCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 1123569999998766666654422 3467899999999887789999998763
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.95 E-value=0.00097 Score=63.34 Aligned_cols=164 Identities=15% Similarity=0.115 Sum_probs=101.5
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
....++++.++| .+++++.+|.|..|+....+.+...... . ..+.....+..+++++ +++ |++
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~------------~h~~~~~~i~~i~~~~-~~~~l~~ 250 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ--H------------SMINNSNSIRSVKFSP-QGSLLAI 250 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC--C---------------CCCCCEEEEEECS-STTEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc--c------------cccccCCccceEEECC-CCCEEEE
Confidence 456889999999 8999999999999997622222111100 0 0000023467899998 555 455
Q ss_pred EeCC---CcEEEEeCCCCeEEE-cccccC-C-------cccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 148 ADAY---FGLMKVGPEGGLATS-LATEAE-G-------VPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 148 ad~~---~gl~~~d~~~~~~~~-l~~~~~-~-------~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+... +.|..+|..+++... +..... . .....+.++++.++|.+.++.+.
T Consensus 251 ~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------- 311 (397)
T 1sq9_A 251 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW------------------- 311 (397)
T ss_dssp EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-------------------
T ss_pred EecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-------------------
Confidence 5544 568899987765432 221000 0 01235678899999987776532
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecc------c----------------CCCcceEEEecCC----------CE
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLR------N----------------LQFPNGLSLSKDK----------SF 263 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~------~----------------~~~~ngi~l~~d~----------~~ 263 (406)
+|.|..||..+++...... . ....+.+++++|+ +.
T Consensus 312 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 378 (397)
T 1sq9_A 312 -------------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES 378 (397)
T ss_dssp -------------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCE
T ss_pred -------------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccce
Confidence 4789999998876544433 2 2345689999998 45
Q ss_pred EEEEeCCCCeEEEEEeeC
Q 015463 264 FVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 264 l~v~~t~~~~i~~~~~~g 281 (406)
+ ++....+.|..|++.+
T Consensus 379 l-~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 379 L-CCVCLDRSIRWFREAG 395 (397)
T ss_dssp E-EEEETTTEEEEEEEEC
T ss_pred E-EEecCCCcEEEEEcCC
Confidence 5 4444567888888763
No 214
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.94 E-value=0.0019 Score=66.98 Aligned_cols=157 Identities=14% Similarity=0.137 Sum_probs=102.5
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC---cE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG---DL 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g---~L 145 (406)
....++++.++|+.+.+++.++.|..|+...-........ ..........+++.+ ++ .|
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~-~~~~~~l 534 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG-----------------GEGHRDWVSCVRFSP-NTLQPTI 534 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS-----------------TTSCSSCEEEEEECS-CSSSCEE
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccC-----------------CCCCCCcEEEEEEeC-CCCcceE
Confidence 3457889999999899999999999998652111111100 001123356788887 43 35
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
..+...+.|..+|..+++........ ...+.+++++++|++.++.+.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h----~~~v~~v~~spdg~~l~sg~~----------------------------- 581 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGH----TGYVSTVAVSPDGSLCASGGK----------------------------- 581 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEET-----------------------------
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCC----CCCEEEEEEeCCCCEEEEEeC-----------------------------
Confidence 56666677899998877654322111 234778999999988877542
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..+|..+++...........+.+++++++..+..+. .+.|..+++..
T Consensus 582 ---Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~~~i~iwd~~~ 632 (694)
T 3dm0_A 582 ---DGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT--EHGIKIWDLES 632 (694)
T ss_dssp ---TSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE--TTEEEEEETTT
T ss_pred ---CCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc--CCCEEEEECCC
Confidence 4778889988876544343334457889999998765554 35687777653
No 215
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.94 E-value=0.0014 Score=68.74 Aligned_cols=186 Identities=6% Similarity=-0.095 Sum_probs=112.6
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC-cEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG-DLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g-~L~Va 148 (406)
...++++.++|+.+.+++.+|.|..|+........... ...+....+++.+ ++ .|.++
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~--------------------~~~~~v~~~~~s~-~~~~l~~~ 115 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE--------------------AHPDYIRSIAVHP-TKPYVLSG 115 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe--------------------cCCCCEEEEEEeC-CCCEEEEE
Confidence 45788999999989999999999999976211111111 0124467889998 55 46666
Q ss_pred eCCCcEEEEeCCCC-eEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 149 DAYFGLMKVGPEGG-LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 149 d~~~gl~~~d~~~~-~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
+..+.|..++.+++ ......... ...+.++++.+ +|++.++.+.
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l~~~~~------------------------------ 161 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASGCL------------------------------ 161 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECC----SSCEEEEEEETTEEEEEEEEET------------------------------
T ss_pred cCCCEEEEEECCCCceEEEEEcCC----CCcEEEEEEEcCCCCEEEEEeC------------------------------
Confidence 66667888888765 322211111 12467888888 7766665432
Q ss_pred CCCCeEEEEeCCCCeEEEe-cccC-CCcceEEEec--CCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEE
Q 015463 227 KDTGRVLKYDPTTKQTTVL-LRNL-QFPNGLSLSK--DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRT 302 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~-~~~~-~~~ngi~l~~--d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~ 302 (406)
+|.|..||..+++.... .... ...+.+++++ ++..++.+ ...+.|..+++...+ ....+..-.+....+++
T Consensus 162 --dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 162 --DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVF 236 (814)
T ss_dssp --TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEE-CTTSEEEEEETTTTE--EEEEEECCSSCEEEEEE
T ss_pred --CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEE
Confidence 37788999876543322 2222 4457788988 88766554 456788888865321 11112111122345677
Q ss_pred CCCCCEEEEEccC
Q 015463 303 NEKGEFWVAIHCR 315 (406)
Q Consensus 303 d~~G~lwv~~~~~ 315 (406)
+++|.+.++....
T Consensus 237 ~~~~~~l~~~~~d 249 (814)
T 3mkq_A 237 HPTLPIIISGSED 249 (814)
T ss_dssp CSSSSEEEEEETT
T ss_pred cCCCCEEEEEeCC
Confidence 8888866555443
No 216
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.94 E-value=0.0046 Score=68.33 Aligned_cols=189 Identities=11% Similarity=-0.004 Sum_probs=114.9
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc--EE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD--LY 146 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~--L~ 146 (406)
....+++++++|+.+.+++.+|.|..|+...-+...... ...+....+++.++.+. +.
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~~~l~ 717 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD--------------------EHSEQVNCCHFTNKSNHLLLA 717 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECSSSSCCEEE
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc--------------------CCCCcEEEEEEecCCCceEEE
Confidence 345788999999988999999999999976211111111 01233567888763222 33
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
.+...+.|..+|..+++....... ....+.++++.++|++.++.+.
T Consensus 718 sg~~d~~v~vwd~~~~~~~~~~~~----h~~~v~~~~~sp~~~~l~s~s~------------------------------ 763 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQKECRNTMFG----HTNSVNHCRFSPDDELLASCSA------------------------------ 763 (1249)
T ss_dssp EEETTSCEEEEETTSSSEEEEECC----CSSCEEEEEECSSTTEEEEEES------------------------------
T ss_pred EEeCCCeEEEEECCCcchhheecC----CCCCEEEEEEecCCCEEEEEEC------------------------------
Confidence 444446688999887764332211 1234778899999987776532
Q ss_pred CCCCeEEEEeCCCCeEEEeccc--------------CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-
Q 015463 227 KDTGRVLKYDPTTKQTTVLLRN--------------LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA- 291 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~~~~~~--------------~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~- 291 (406)
+|.|..||..+++....... ......+++++|++.++++. .+.+..+++.... ....+.
T Consensus 764 --dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~--~~~~~~~ 837 (1249)
T 3sfz_A 764 --DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSG--LLAEIHT 837 (1249)
T ss_dssp --SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCC--EEEEEEC
T ss_pred --CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCC--ceeEEcC
Confidence 36788888776654322110 11235678999999887765 4688888865321 111111
Q ss_pred cCCCCCCceEECCCCCEEEEEccCCc
Q 015463 292 ILPGYPDNVRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 292 ~l~g~pd~i~~d~~G~lwv~~~~~~~ 317 (406)
.-.+....++++++|++.++......
T Consensus 838 ~~~~~v~~~~~sp~~~~l~~~~~dg~ 863 (1249)
T 3sfz_A 838 GHHSTIQYCDFSPYDHLAVIALSQYC 863 (1249)
T ss_dssp SSSSCCCEEEECSSTTEEEEECSSSC
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCe
Confidence 11233456778888887666554433
No 217
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.0083 Score=56.05 Aligned_cols=146 Identities=8% Similarity=-0.005 Sum_probs=89.2
Q ss_pred CcceEEEEeC--CCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccc
Q 015463 131 GRPLGLRFDK--KTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKEN 208 (406)
Q Consensus 131 ~~p~gi~~d~--~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~ 208 (406)
+....+++++ ++..+..+...+.|..+|.++++....... .....+..+++.++|.+.++.+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~~lasg~~------------ 190 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSLLLALYSP------------ 190 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSCEEEEECT------------
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCCEEEEEcC------------
Confidence 3456788876 444455566667799999888765332211 11224778999999988877432
Q ss_pred ccccccccCCCCCCCcccCCCCeEEEEeCCCCeEE--Eecc-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCC-
Q 015463 209 IPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTT--VLLR-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKA- 284 (406)
Q Consensus 209 ~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~--~~~~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~- 284 (406)
+|.|..||..+++.. .+.. .......++++|++..+..+.. +.|..+++...+.
T Consensus 191 --------------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 191 --------------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD--QTVVCFDLRKDVGT 248 (343)
T ss_dssp --------------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES--SBEEEEETTSSTTC
T ss_pred --------------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--CeEEEEEcCCCCcc
Confidence 477999999887643 3322 2334578999999988776653 3888888764321
Q ss_pred cceeeeecCCCCCC---ceEECCCCCEEEEEcc
Q 015463 285 GNLEAFAILPGYPD---NVRTNEKGEFWVAIHC 314 (406)
Q Consensus 285 ~~~~~~~~l~g~pd---~i~~d~~G~lwv~~~~ 314 (406)
.....+. ....+- .++++++|.+.++...
T Consensus 249 ~~~~~~~-~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 249 LAYPTYT-IPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp BSSCCCB-C-----CCEEEEECTTSSEEEEEET
T ss_pred eeecccc-cccccccceEEEECCCCCEEEEecC
Confidence 1111111 011222 3888999987766443
No 218
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.92 E-value=0.0027 Score=58.26 Aligned_cols=194 Identities=13% Similarity=0.061 Sum_probs=105.9
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-CCcE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-~g~L 145 (406)
..-.+++++++|+.+.+++.|+.|..|+.. ....+.. .....+....+++.+. ++++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~--------------------l~gH~~~V~~v~~s~~~~g~~ 69 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDT--------------------LTGHEGPVWRVDWAHPKFGTI 69 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEE--------------------ECCCSSCEEEEEECCGGGCSE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEE--------------------EccccCCeEEEEecCCCcCCE
Confidence 345688999999989999999999998754 1111111 0111244567888642 2554
Q ss_pred -EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 146 -YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 146 -~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
..+...+.|..+|.++++...+... .+ ....++++++.++ |.+.++.+.
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~g~~l~s~s~-------------------------- 121 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVH-AV-HSASVNSVQWAPHEYGPMLLVASS-------------------------- 121 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEE-CC-CSSCEEEEEECCGGGCSEEEEEET--------------------------
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEe-ec-CCCceeEEEeCcCCCCcEEEEEEC--------------------------
Confidence 4555556788888876642221111 11 1134678888876 766665432
Q ss_pred CcccCCCCeEEEEeCCCCe---EEEecccCCCcceEEEecC-------------CCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 223 IKITKDTGRVLKYDPTTKQ---TTVLLRNLQFPNGLSLSKD-------------KSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~~ngi~l~~d-------------~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
+|.+..+|..++. ...+.......+.++++|+ ++.+ ++....+.|..+++..... .
T Consensus 122 ------d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l-~sgs~D~~v~lwd~~~~~~-~ 193 (297)
T 2pm7_B 122 ------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQ-T 193 (297)
T ss_dssp ------TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE-EEEETTSCEEEEEEETTTT-E
T ss_pred ------CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE-EEEcCCCcEEEEEEcCCCc-e
Confidence 3667777766542 1122222223456778876 3344 4444556777777763221 1
Q ss_pred eeeeecCCCCC---CceEECCCC---CEEEEEccCCcc
Q 015463 287 LEAFAILPGYP---DNVRTNEKG---EFWVAIHCRRSL 318 (406)
Q Consensus 287 ~~~~~~l~g~p---d~i~~d~~G---~lwv~~~~~~~~ 318 (406)
......+.+.. ..+++++++ .+.++....+.+
T Consensus 194 ~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 11122233333 346677774 455554444443
No 219
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.92 E-value=0.0017 Score=61.89 Aligned_cols=156 Identities=15% Similarity=0.106 Sum_probs=99.1
Q ss_pred ceEEEcC-CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE-
Q 015463 72 ESMAFDP-LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA- 148 (406)
Q Consensus 72 e~i~~d~-~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va- 148 (406)
.++.+.+ +++.+.+|+.+|.|..||.. .-..+... ....+....+++.+ +++++++
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~--------------------~~h~~~v~~v~~~p-~~~~l~s~ 267 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY--------------------HGHEGDINSVKFFP-DGQRFGTG 267 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE--------------------CCCSSCCCEEEECT-TSSEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE--------------------CCcCCCeEEEEEec-CCCeEEEE
Confidence 4566654 67878899999999999864 11111100 01124467899999 6665544
Q ss_pred eCCCcEEEEeCCCCeEEEcccccC---CcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAE---GVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~---~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
...+.|..+|..+++......... ......+..+++.++|.+.++.+.
T Consensus 268 s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----------------------------- 318 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS----------------------------- 318 (380)
T ss_dssp CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------------------------
T ss_pred cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----------------------------
Confidence 444668899998876433221111 112234778999999988877543
Q ss_pred cCCCCeEEEEeCCCCeEEEecc----c-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLR----N-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~----~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.+..||..+++...... + ....+.++++||++.+ ++....+.|..+++.+
T Consensus 319 ---dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 319 ---NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ---TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCS
T ss_pred ---CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCC
Confidence 4779999987776543221 1 1234689999999876 4555567787777764
No 220
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.91 E-value=0.0022 Score=60.10 Aligned_cols=193 Identities=11% Similarity=0.052 Sum_probs=108.0
Q ss_pred cCcceEEEcCC--CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC--C
Q 015463 69 QGPESMAFDPL--GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK--T 142 (406)
Q Consensus 69 ~gpe~i~~d~~--g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~--~ 142 (406)
....++++.++ ++.++++..+|.|..|+.. .+....... ........+++.++ .
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA--------------------VHSASVNSVQWAPHEYG 115 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCGGGC
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec--------------------CCCcceEEEEeCCCCCC
Confidence 34467888765 8889999999999999865 222222111 11244678899883 2
Q ss_pred CcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-------------CCCEEEEeCCCchhhhccccccc
Q 015463 143 GDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-------------EGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 143 g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-------------dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
..|+++...+.|..+|..++........ .+ ....+..+++.+ ++.+.++.+.
T Consensus 116 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------- 180 (379)
T 3jrp_A 116 PLLLVASSDGKVSVVEFKENGTTSPIII-DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------------- 180 (379)
T ss_dssp SEEEEEETTSEEEEEECCTTSCCCEEEE-EC-CTTCEEEEEECCCC----------CTTCEEEEEET-------------
T ss_pred CEEEEecCCCcEEEEecCCCCceeeEEe-cC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeC-------------
Confidence 3456666666788888876521110000 00 112466778877 5766665432
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCeE--E---EecccCCCcceEEEecC---CCEEEEEeCCCCeEEEEEeeC
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT--T---VLLRNLQFPNGLSLSKD---KSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~--~---~~~~~~~~~ngi~l~~d---~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..||..+++. . .+.........++++|+ ++.++.+ ...+.|..|++..
T Consensus 181 -------------------dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 181 -------------------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV-SQDRTCIIWTQDN 240 (379)
T ss_dssp -------------------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ETTSCEEEEEESS
T ss_pred -------------------CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE-eCCCEEEEEeCCC
Confidence 36688887665431 1 11112233568999999 6655444 4567888888764
Q ss_pred CCCcceeeeecC---CCCCCceEECCCCCEEEEEccCC
Q 015463 282 EKAGNLEAFAIL---PGYPDNVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 282 ~~~~~~~~~~~l---~g~pd~i~~d~~G~lwv~~~~~~ 316 (406)
............ .+....++++++|.+.++.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 278 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 278 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC
Confidence 321111122111 22233567788888555544333
No 221
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.90 E-value=0.0012 Score=63.48 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=109.3
Q ss_pred CcceEEEcC--CCCeeEEEecCC----EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 70 GPESMAFDP--LGRGPYTGVADG----RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 70 gpe~i~~d~--~g~~ly~g~~~g----~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
...+|++|+ .++ +|+++..| +|++.+.. .|+.+.....-..... ........+..+|++++.
T Consensus 56 ~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~---------~~~~~~~~~i~~l~~~~~ 125 (394)
T 3b7f_A 56 TIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPE---------GETGRVVDHVFWLTPGHA 125 (394)
T ss_dssp EEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC-------------CCCCCEEEEEEECCT
T ss_pred ceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCccccCCCccc---------ccccccccceeEEEeCCC
Confidence 457899998 566 99999887 89998654 6665532100000000 000000123457888852
Q ss_pred --CCcEEEEeCCCcEEEEeCCCCeEEEccccc--C------------CcccccccceEEcC--CCCEEEEeCCCchhhhc
Q 015463 142 --TGDLYIADAYFGLMKVGPEGGLATSLATEA--E------------GVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRQ 203 (406)
Q Consensus 142 --~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~--~------------~~~~~~~~~l~~d~--dG~ly~t~~~~~~~~~~ 203 (406)
.+.||++....+|++.+-.+...+.+.... . +.....+..|++|+ .+.||++...
T Consensus 126 ~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------- 198 (394)
T 3b7f_A 126 SEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------- 198 (394)
T ss_dssp TSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------
T ss_pred CCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------
Confidence 578999987789999976666655543210 0 11122356788886 4689998642
Q ss_pred cccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCC-------------CcceEEEecC-CCEEEEEeC
Q 015463 204 MQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQ-------------FPNGLSLSKD-KSFFVFCEG 269 (406)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~-------------~~ngi~l~~d-~~~l~v~~t 269 (406)
++|++.+..+...+.+..... ....|+++++ .+.+|+..
T Consensus 199 --------------------------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~- 251 (394)
T 3b7f_A 199 --------------------------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN- 251 (394)
T ss_dssp --------------------------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-
T ss_pred --------------------------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-
Confidence 568887766555555532211 1345677764 35677764
Q ss_pred CCCeEEEEEeeCCCCcceeeee-cCCC----CCCceEEC--CCCCEEEEEc
Q 015463 270 SVGRLHKYWLIGEKAGNLEAFA-ILPG----YPDNVRTN--EKGEFWVAIH 313 (406)
Q Consensus 270 ~~~~i~~~~~~g~~~~~~~~~~-~l~g----~pd~i~~d--~~G~lwv~~~ 313 (406)
...|++.+-.|. +.+.+. .++. +...+++| ..+.+|+++.
T Consensus 252 -~~gl~~s~D~G~---tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 252 -HCGIYRMDRREG---VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp -TTEEEEEETTTT---EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred -CCeEEEeCCCCC---cceECCCCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 357887763331 222221 1221 11135666 4578999874
No 222
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.89 E-value=0.0022 Score=59.77 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=66.1
Q ss_pred cCcccCcceEEEcCC---CCeeEEEecCCEEEEEeCCc-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 65 LNQIQGPESMAFDPL---GRGPYTGVADGRILFWDGLK-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~---g~~ly~g~~~g~I~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
.+.-....++++.++ |+.+++++.+|.|..|+... -..+... .....+....+++.+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------------~~~h~~~v~~~~~~~ 96 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKA-------------------QQMHTGPVLDVCWSD 96 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEE-------------------EEECSSCEEEEEECT
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEE-------------------eccccCCEEEEEECc
Confidence 344455688999998 58899999999999998641 1111000 000124467899998
Q ss_pred CCCc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEE--cCCCCEEEEe
Q 015463 141 KTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDI--DDEGNVYFTD 194 (406)
Q Consensus 141 ~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~--d~dG~ly~t~ 194 (406)
+++ |+.+...+.|..+|.++++...+... ...+.++++ .++|++.++.
T Consensus 97 -~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 97 -DGSKVFTASCDKTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp -TSSEEEEEETTSEEEEEETTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEE
T ss_pred -CCCEEEEEcCCCcEEEEEcCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEc
Confidence 554 56666566789999988876543221 123566777 7777655553
No 223
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.89 E-value=0.002 Score=66.07 Aligned_cols=149 Identities=13% Similarity=0.030 Sum_probs=85.4
Q ss_pred CcceEEEEeCCCCc-EEEEeCC----------CcEEEEeCCC------CeEEEcc-cccCCcccccccceEEcCCCC-EE
Q 015463 131 GRPLGLRFDKKTGD-LYIADAY----------FGLMKVGPEG------GLATSLA-TEAEGVPLRFTNDLDIDDEGN-VY 191 (406)
Q Consensus 131 ~~p~gi~~d~~~g~-L~Vad~~----------~gl~~~d~~~------~~~~~l~-~~~~~~~~~~~~~l~~d~dG~-ly 191 (406)
.+..++++++ +|+ |+.+... ..|+++|.++ ++.+.+. .. ......+++.+||+ |+
T Consensus 130 ~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 130 LRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA-----HRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp EEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC-----SSEECCCEECTTSSEEE
T ss_pred ccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecC-----CCcccCceECCCCCEEE
Confidence 3456789999 554 5555432 3699999988 6666554 21 12456788999996 55
Q ss_pred EEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCC-CC---eEEEeccc-CCCcceEEEecCCCEEEE
Q 015463 192 FTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPT-TK---QTTVLLRN-LQFPNGLSLSKDKSFFVF 266 (406)
Q Consensus 192 ~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~-t~---~~~~~~~~-~~~~ngi~l~~d~~~l~v 266 (406)
++.... ....| ....|+.+|.+ ++ +.+.+..+ ......+++++|++ +++
T Consensus 204 ~~~~~~--~~~~~-----------------------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~ 257 (662)
T 3azo_A 204 WLAWDH--PRMPW-----------------------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIV 257 (662)
T ss_dssp EEEECT--TCCTT-----------------------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEE
T ss_pred EEECCC--CCCCC-----------------------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEE
Confidence 554210 00000 12469999988 56 55555543 24556789999999 555
Q ss_pred EeCCCC--eEEEEEeeCCCCcceeeeecC---CCC------CCceEECCCCCEEEEEcc
Q 015463 267 CEGSVG--RLHKYWLIGEKAGNLEAFAIL---PGY------PDNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 267 ~~t~~~--~i~~~~~~g~~~~~~~~~~~l---~g~------pd~i~~d~~G~lwv~~~~ 314 (406)
+....+ +|+++++++. ..+.+... .+. ...+++.++|.+++....
T Consensus 258 ~~~~~~~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 258 ATDRTGWWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EECTTSSCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred EECCCCCeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 544344 7888876432 22222110 000 134666677887665543
No 224
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.87 E-value=0.0025 Score=59.02 Aligned_cols=151 Identities=11% Similarity=-0.009 Sum_probs=96.5
Q ss_pred cCcceEEEcCCCC-eeEEEecCCEEEEEeC-C--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 69 QGPESMAFDPLGR-GPYTGVADGRILFWDG-L--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 69 ~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
....++++.++++ .+++++.+|.|..|+. . ....+.. .........+++.+ ++.
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---------------------~~~~~~v~~l~~~~-~~~ 114 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN---------------------NEANLGICRICKYG-DDK 114 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS---------------------CCCCSCEEEEEEET-TTE
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc---------------------cCCCCceEEEEeCC-CCE
Confidence 3557889999999 8999999999999987 6 2211100 00124467889998 667
Q ss_pred EEEEeCCCcEEEEeCCC---------CeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 145 LYIADAYFGLMKVGPEG---------GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~---------~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
|+.+...+.|..+|..+ ++. +.. .. ....+.++++.+++ ++++..
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~-~~--~~~~v~~~~~~~~~-l~~~~~-------------------- 168 (342)
T 1yfq_A 115 LIAASWDGLIEVIDPRNYGDGVIAVKNLN--SNN-TK--VKNKIFTMDTNSSR-LIVGMN-------------------- 168 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEEEEESC--SSS-SS--SCCCEEEEEECSSE-EEEEES--------------------
T ss_pred EEEEcCCCeEEEEcccccccccccccCCe--eeE-Ee--eCCceEEEEecCCc-EEEEeC--------------------
Confidence 77777767788888654 221 111 11 12346678888877 555543
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCC-Ce--EEEec-ccCCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeC
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTT-KQ--TTVLL-RNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t-~~--~~~~~-~~~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..||..+ +. ..... ..-.....+++++ +++.++++.. .+.|..++.+.
T Consensus 169 -------------d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~ 225 (342)
T 1yfq_A 169 -------------NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-DGRVAVEFFDD 225 (342)
T ss_dssp -------------TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-TSEEEEEECCT
T ss_pred -------------CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec-CCcEEEEEEcC
Confidence 36788999876 33 22222 2223457889999 9987766654 67777777653
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.87 E-value=0.00048 Score=66.05 Aligned_cols=203 Identities=9% Similarity=-0.058 Sum_probs=110.3
Q ss_pred cCcceEEEcCCCCeeEEEec--CCEEEE--EeCCceeEEEeec-------CCC--ccccCCCC------Cc----cccc-
Q 015463 69 QGPESMAFDPLGRGPYTGVA--DGRILF--WDGLKWTDFAFTS-------NNR--SELCNPKP------IA----TSYL- 124 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~--~g~I~~--~~~~~~~~~~~~~-------~~~--~~~~~~~~------~~----~~~~- 124 (406)
..|+.+++++||+.+|+... +..+.. +|......+.... ... ...|.... .+ ....
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 46999999999998999865 345666 6654322221000 000 00011000 00 0000
Q ss_pred ----ccCCcCCcceEEEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccc-cC-C---cccccccc---eEEcCCC-CEE
Q 015463 125 ----KNEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE-AE-G---VPLRFTND---LDIDDEG-NVY 191 (406)
Q Consensus 125 ----~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~-~~-~---~~~~~~~~---l~~d~dG-~ly 191 (406)
.......+|. . .++++.+|+.+. +.++.+|..++..+....- .. . .....|.+ +++++|| ++|
T Consensus 204 ~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ly 279 (368)
T 1mda_H 204 AQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIM 279 (368)
T ss_dssp CCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred EEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEE
Confidence 0011233454 3 443566676666 7899999875433222110 00 0 00112223 7888887 688
Q ss_pred EEeC-C-CchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeC
Q 015463 192 FTDS-S-TNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG 269 (406)
Q Consensus 192 ~t~~-~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t 269 (406)
++.. . .. .+ .. .+.+..+|.++++.......-..|+|+++++|++.+|++..
T Consensus 280 V~~~~~~~~--------------~~-----------~~-~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 280 ILTVEHSRS--------------CL-----------AA-AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp EEEEECSSC--------------TT-----------SC-EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEE
T ss_pred EEeccccCc--------------cc-----------cc-CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEcc
Confidence 8752 1 00 00 00 13467999998876554433346899999999998888877
Q ss_pred -CCCeEEEEEeeCCCCcceeeeecCCCCCCceEECC
Q 015463 270 -SVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNE 304 (406)
Q Consensus 270 -~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~ 304 (406)
..+.|..+++.. .+....+...+.|+++++..
T Consensus 334 ~~~~~VsVID~~t---~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 334 AGTEVLDIYDAAS---DQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp TTTTEEEEEESSS---CEEEEECCCCSCCCEEECCC
T ss_pred CCCCeEEEEECCC---CcEEEEEECCCCCCEEEeec
Confidence 578999999753 22111223456799988754
No 226
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.0059 Score=57.10 Aligned_cols=185 Identities=10% Similarity=0.006 Sum_probs=108.6
Q ss_pred CCCCeeEEEecCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcE
Q 015463 78 PLGRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (406)
Q Consensus 78 ~~g~~ly~g~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl 154 (406)
.+++.+++|..+|.|..|+.. ....+.... .......|. ++-...++.+.+-+....+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~------------------v~~~~~~~~-~~s~s~D~~i~~w~~~~~~ 106 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPN------------------PRTGGEHPA-IISRGPCNRLLLLYPGNQI 106 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEEC------------------CCTTCCCCS-EEEECSTTEEEEEETTTEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCC------------------ceeeeeCCc-eEEecCCCeEEEEEccCce
Confidence 356678999999999999865 222222110 001112233 3333336777777777777
Q ss_pred EEEeCCCCeE-EEcccccCCcccccccceEEcC--CCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCe
Q 015463 155 MKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDD--EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGR 231 (406)
Q Consensus 155 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~--dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~ 231 (406)
..++..+++. ..+.... ...+.++++.+ +|+++++.+. +|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~s~--------------------------------dg~ 150 (343)
T 3lrv_A 107 TILDSKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFIWADN--------------------------------RGT 150 (343)
T ss_dssp EEEETTTCCEEEEEECCC----SSCEEEEECCC---CCEEEEEET--------------------------------TCC
T ss_pred EEeecCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEEEEeC--------------------------------CCc
Confidence 7788777652 2221111 12467888999 8888876532 477
Q ss_pred EEEEeCCCCeEEEeccc--CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CCCCCCceEECCCCCE
Q 015463 232 VLKYDPTTKQTTVLLRN--LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEKGEF 308 (406)
Q Consensus 232 l~~~d~~t~~~~~~~~~--~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~g~pd~i~~d~~G~l 308 (406)
+..||..+++....... ......++++||+..+. +....+.|..+++...+.-. ..+.. -.+....++++++|.+
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~la-sg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLA-LYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEE-EECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSE
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEE-EEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCE
Confidence 99999988876443322 22357899999998654 44556789889876432110 12211 1222345778899987
Q ss_pred EEEEccCCcchh
Q 015463 309 WVAIHCRRSLYS 320 (406)
Q Consensus 309 wv~~~~~~~~~~ 320 (406)
.++...+ .+..
T Consensus 229 l~s~~~~-~v~i 239 (343)
T 3lrv_A 229 MVVECDQ-TVVC 239 (343)
T ss_dssp EEEEESS-BEEE
T ss_pred EEEEeCC-eEEE
Confidence 6665544 4433
No 227
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.86 E-value=0.00093 Score=63.41 Aligned_cols=155 Identities=12% Similarity=0.033 Sum_probs=102.1
Q ss_pred cCcceEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE
Q 015463 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL 145 (406)
Q Consensus 69 ~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L 145 (406)
....++++.+ +++.+++++.+|.|..|+.. ....+.... ........+++.++...|
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l 178 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTD--------------------SWDYWYCCVDVSVSRQML 178 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCC--------------------CSSCCEEEEEEETTTTEE
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccC--------------------CCCCCeEEEEECCCCCEE
Confidence 3456888988 67778999999999999876 222221100 012346788999844445
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
+++...+.|..+|.++..+..+... ...+.++++.++|. ++++.+.
T Consensus 179 ~~~~~d~~i~i~d~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~---------------------------- 225 (383)
T 3ei3_B 179 ATGDSTGRLLLLGLDGHEIFKEKLH-----KAKVTHAEFNPRCDWLMATSSV---------------------------- 225 (383)
T ss_dssp EEEETTSEEEEEETTSCEEEEEECS-----SSCEEEEEECSSCTTEEEEEET----------------------------
T ss_pred EEECCCCCEEEEECCCCEEEEeccC-----CCcEEEEEECCCCCCEEEEEeC----------------------------
Confidence 6666667788999866555444321 23577899999997 6666432
Q ss_pred ccCCCCeEEEEeCCC----CeEEEecccCCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeC
Q 015463 225 ITKDTGRVLKYDPTT----KQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t----~~~~~~~~~~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.+..||..+ ++.............+++++ |++.++.+. ..+.|..|++..
T Consensus 226 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~-~d~~i~iwd~~~ 282 (383)
T 3ei3_B 226 ----DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD-QRNEIRVYSSYD 282 (383)
T ss_dssp ----TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE-SSSEEEEEETTB
T ss_pred ----CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc-CCCcEEEEECCC
Confidence 36788888876 44433333334557899999 998776654 457899998764
No 228
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.85 E-value=0.00074 Score=64.33 Aligned_cols=155 Identities=12% Similarity=0.061 Sum_probs=92.5
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
..++++.++|+.+.+++ ++++.+|+.. ......... .........++|.+ ++..+++.
T Consensus 179 V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~v~~v~fsp-dg~~l~~~ 237 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTD-------------------FDKNWSLSKINFIA-DDTVLIAA 237 (365)
T ss_dssp CCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECC-------------------CCTTEEEEEEEEEE-TTEEEEEE
T ss_pred eEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeec-------------------CCCCCCEEEEEEcC-CCCEEEEE
Confidence 47899999999555555 5567777654 211111110 00122356788998 66655443
Q ss_pred -CCC----cEEEEeCCCCeEEEccc-ccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 150 -AYF----GLMKVGPEGGLATSLAT-EAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 150 -~~~----gl~~~d~~~~~~~~l~~-~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
..+ -+..++........... ...+ ....++++++.+||++.++.+.
T Consensus 238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~--------------------------- 289 (365)
T 4h5i_A 238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASN--------------------------- 289 (365)
T ss_dssp EESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEET---------------------------
T ss_pred ecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcC---------------------------
Confidence 222 25566655444322111 1111 1234778999999988776532
Q ss_pred cccCCCCeEEEEeCCCCeEEE-ecccCC-CcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 224 KITKDTGRVLKYDPTTKQTTV-LLRNLQ-FPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~-~~~~~~-~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
++.|..||.++++... +..+.. ....++++||++.| ++....+.|..+++.
T Consensus 290 -----D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 290 -----DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLP 342 (365)
T ss_dssp -----TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECC
T ss_pred -----CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcC
Confidence 4779999999887543 444433 34789999999866 454556778777764
No 229
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.0024 Score=67.03 Aligned_cols=198 Identities=14% Similarity=0.079 Sum_probs=114.6
Q ss_pred cCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 65 LNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 65 ~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
.+.-....+++++++|+.+.+++.+|.|..|+.. ......... ...+...++++.++.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~--------------------~h~~~V~~l~~s~~~ 65 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--------------------GHEGPVWRVDWAHPK 65 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCTT
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc--------------------CCcCceEEEEecCCC
Confidence 3344455778888999988999999999999754 222221111 112446788887631
Q ss_pred -Cc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeCCCchhhhccccccccccccccCC
Q 015463 143 -GD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 143 -g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
++ |..+...+.|..+|..+++........ + ....+.++++.++ |++.++.+.
T Consensus 66 ~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~~l~sgs~---------------------- 121 (753)
T 3jro_A 66 FGTILASCSYDGKVLIWKEENGRWSQIAVHA-V-HSASVNSVQWAPHEYGPLLLVASS---------------------- 121 (753)
T ss_dssp SCSEEEEEETTSCEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCGGGCSEEEEEET----------------------
T ss_pred CCCEEEEEeCCCeEEEEECCCCccccccccc-C-CCCCeEEEEECCCCCCCEEEEEeC----------------------
Confidence 54 555655566888898877533322211 1 1234778899888 877766432
Q ss_pred CCCCCcccCCCCeEEEEeCCCCe---EEEecccCCCcceEEEec-------------CCCEEEEEeCCCCeEEEEEeeCC
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQ---TTVLLRNLQFPNGLSLSK-------------DKSFFVFCEGSVGRLHKYWLIGE 282 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~~ngi~l~~-------------d~~~l~v~~t~~~~i~~~~~~g~ 282 (406)
+|.+..||..++. ...+.........++++| |++.++.+ ...+.|..+++...
T Consensus 122 ----------dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~ 190 (753)
T 3jro_A 122 ----------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSD 190 (753)
T ss_dssp ----------TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETT
T ss_pred ----------CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCC
Confidence 4778888887652 222222223446788888 46666554 44678888887643
Q ss_pred CCcceeeeecCCC---CCCceEECCC---CCEEEEEccCCcc
Q 015463 283 KAGNLEAFAILPG---YPDNVRTNEK---GEFWVAIHCRRSL 318 (406)
Q Consensus 283 ~~~~~~~~~~l~g---~pd~i~~d~~---G~lwv~~~~~~~~ 318 (406)
... ......+.+ ....++++++ |++.++....+.+
T Consensus 191 ~~~-~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 191 AQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp TTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred ccc-ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 211 112222222 2345677888 7766665544443
No 230
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.84 E-value=0.0034 Score=60.57 Aligned_cols=167 Identities=8% Similarity=0.032 Sum_probs=99.5
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC-
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG- 143 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g- 143 (406)
+.-....++++.++|+.+.++ .+|.|..|+.. .-..+........ ...........+++++ ++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~p-~~~ 239 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPA-------------NMEELTEVITAAEFHP-NSC 239 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS-------------SGGGCCCCEEEEEECS-SCT
T ss_pred CCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccc-------------cccccCcceEEEEECC-CCC
Confidence 344456889999999977777 89999999976 2222211100000 0111134567899998 55
Q ss_pred c-EEEEeCCCcEEEEeCCCCeE-----EEcccccCCcc-------cccccceEEcCCCCEEEEeCCCchhhhcccccccc
Q 015463 144 D-LYIADAYFGLMKVGPEGGLA-----TSLATEAEGVP-------LRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIP 210 (406)
Q Consensus 144 ~-L~Vad~~~gl~~~d~~~~~~-----~~l~~~~~~~~-------~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~ 210 (406)
+ |..+...+.|..+|..+++. ..+........ ...+.++++.++|.+.++.+
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--------------- 304 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD--------------- 304 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE---------------
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee---------------
Confidence 4 55555556689999887653 33221110000 01577899999998877642
Q ss_pred ccccccCCCCCCCcccCCCCeEEEEeCCC-CeEEEecccCCC----------------cceEEEecCCCEEEEEeCCCCe
Q 015463 211 LQLCSSLNDPSPIKITKDTGRVLKYDPTT-KQTTVLLRNLQF----------------PNGLSLSKDKSFFVFCEGSVGR 273 (406)
Q Consensus 211 ~~~~~e~~~~~~~~~~~~~g~l~~~d~~t-~~~~~~~~~~~~----------------~ngi~l~~d~~~l~v~~t~~~~ 273 (406)
. |.|..||..+ ++.......... ...+++++|++.+ ++....+.
T Consensus 305 -----------------~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~ 365 (447)
T 3dw8_B 305 -----------------Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNF 365 (447)
T ss_dssp -----------------S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTE
T ss_pred -----------------C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCE
Confidence 1 6788888875 432111111111 1128999999877 55566788
Q ss_pred EEEEEeeC
Q 015463 274 LHKYWLIG 281 (406)
Q Consensus 274 i~~~~~~g 281 (406)
|..|++..
T Consensus 366 v~iwd~~~ 373 (447)
T 3dw8_B 366 FRMFDRNT 373 (447)
T ss_dssp EEEEETTT
T ss_pred EEEEEcCC
Confidence 88888764
No 231
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.84 E-value=0.014 Score=53.56 Aligned_cols=182 Identities=9% Similarity=-0.040 Sum_probs=105.2
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEEe
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIAD 149 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Vad 149 (406)
..++++.++++.+.+++.++.|..|+...-..+.... ...+....+++.+ ++. |..+.
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~~~l~sgs 116 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE--------------------AHPDYIRSIAVHP-TKPYVLSGS 116 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE--------------------CCSSCEEEEEECS-SSSEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe--------------------CCCCcEEEEEEcC-CCCEEEEEC
Confidence 3577888899989999999999999976211111110 0123467899998 555 55555
Q ss_pred CCCcEEEEeCCCCe-EEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 150 AYFGLMKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 150 ~~~gl~~~d~~~~~-~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
..+.|..+|.+++. ...... + ....+.++++.+ ++.+.++.+.
T Consensus 117 ~D~~v~lWd~~~~~~~~~~~~---~-h~~~v~~v~~~p~~~~~l~sgs~------------------------------- 161 (304)
T 2ynn_A 117 DDLTVKLWNWENNWALEQTFE---G-HEHFVMCVAFNPKDPSTFASGCL------------------------------- 161 (304)
T ss_dssp TTSCEEEEEGGGTTEEEEEEC---C-CCSCEEEEEECTTCTTEEEEEET-------------------------------
T ss_pred CCCeEEEEECCCCcchhhhhc---c-cCCcEEEEEECCCCCCEEEEEeC-------------------------------
Confidence 55678888877652 222111 1 123467889987 5676666432
Q ss_pred CCCeEEEEeCCCCeEE-Eeccc-CCCcceEEEec--CCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCC---ce
Q 015463 228 DTGRVLKYDPTTKQTT-VLLRN-LQFPNGLSLSK--DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPD---NV 300 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~-~~~~~-~~~~ngi~l~~--d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd---~i 300 (406)
+|.+..||..++... .+..+ ....+.+++++ ++..+ ++....+.|..+++... +....+.|... .+
T Consensus 162 -D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~~-----~~~~~~~~h~~~v~~~ 234 (304)
T 2ynn_A 162 -DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTK-----SCVATLEGHMSNVSFA 234 (304)
T ss_dssp -TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE-EEEETTSEEEEEETTTT-----EEEEEEECCSSCEEEE
T ss_pred -CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE-EEEcCCCeEEEEeCCCC-----ccceeeCCCCCCEEEE
Confidence 467888887654322 12211 12334566665 55555 44445678888876532 11222223222 35
Q ss_pred EECCCCCEEEEEccC
Q 015463 301 RTNEKGEFWVAIHCR 315 (406)
Q Consensus 301 ~~d~~G~lwv~~~~~ 315 (406)
++.+++.+.++....
T Consensus 235 ~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 235 VFHPTLPIIISGSED 249 (304)
T ss_dssp EECSSSSEEEEEETT
T ss_pred EECCCCCEEEEEcCC
Confidence 677888866665443
No 232
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.83 E-value=0.019 Score=52.78 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=106.2
Q ss_pred ccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
-....++++.++|+.++++..++.|..++........... ........+.+.+.+..|..
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~s 145 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--------------------GHTKDVLSVAFSSDNRQIVS 145 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CCSSCEEEEEECTTSSCEEE
T ss_pred CCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec--------------------CCCCceeEEEEeecCcccee
Confidence 3456789999999989999999999999876211111111 00122344556663344556
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC--CEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG--NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
+...+.+..+|..+......... + ....+..+++..++ .+.++.+
T Consensus 146 ~s~d~~~~~~d~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~s~~------------------------------ 192 (340)
T 4aow_A 146 GSRDKTIKLWNTLGVCKYTVQDE--S-HSEWVSCVRFSPNSSNPIIVSCG------------------------------ 192 (340)
T ss_dssp EETTSCEEEECTTSCEEEEECSS--S-CSSCEEEEEECSCSSSCEEEEEE------------------------------
T ss_pred ecCCCeEEEEEeCCCceEEEEec--c-ccCcccceEEccCCCCcEEEEEc------------------------------
Confidence 66556678888765543322111 1 11234555665543 4444432
Q ss_pred cCCCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCCCCceEECC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNE 304 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~~d~ 304 (406)
.++.+..+|..+++......+. ...+.++++||++.++.+. ..+.|..+++...+ ....+ ........+...+
T Consensus 193 --~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~ 266 (340)
T 4aow_A 193 --WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG-KDGQAMLWDLNEGK--HLYTL-DGGDIINALCFSP 266 (340)
T ss_dssp --TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTTE--EEEEE-ECSSCEEEEEECS
T ss_pred --CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe-CCCeEEEEEeccCc--eeeee-cCCceEEeeecCC
Confidence 1366888998887765544332 2346889999998765554 45788888765321 11111 1112223455667
Q ss_pred CCCEEEEEc
Q 015463 305 KGEFWVAIH 313 (406)
Q Consensus 305 ~G~lwv~~~ 313 (406)
++.+.++..
T Consensus 267 ~~~~~~~~~ 275 (340)
T 4aow_A 267 NRYWLCAAT 275 (340)
T ss_dssp SSSEEEEEE
T ss_pred CCceeeccC
Confidence 776665554
No 233
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.82 E-value=0.0022 Score=66.44 Aligned_cols=212 Identities=8% Similarity=-0.015 Sum_probs=105.5
Q ss_pred CcceEEEcCCCCeeEEEecC---------CEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVAD---------GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~---------g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
...++++++||+.+.++..+ +.|+.++.+ ..+.+.... .....+..+++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~--------------------~~~~~~~~~~~ 121 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE--------------------VSNAKLQYAGW 121 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT--------------------CCSCCCSBCCB
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc--------------------cccccccccEE
Confidence 37889999999966666543 677788765 222221100 00122445678
Q ss_pred eCCCCc-EEEEeCCCcEEEEeCCCCeEEEccccc-CCc-------------ccccccceEEcCCCC-EEEEeCCCchhhh
Q 015463 139 DKKTGD-LYIADAYFGLMKVGPEGGLATSLATEA-EGV-------------PLRFTNDLDIDDEGN-VYFTDSSTNYQRR 202 (406)
Q Consensus 139 d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~-~~~-------------~~~~~~~l~~d~dG~-ly~t~~~~~~~~~ 202 (406)
++ +|+ |..+. .+.|+.++.++++...+.... .+. .+..+.++++.+||+ |.++.... -..+
T Consensus 122 SP-dG~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~ 198 (723)
T 1xfd_A 122 GP-KGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVP 198 (723)
T ss_dssp CS-STTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSC
T ss_pred CC-CCCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-Cccc
Confidence 88 564 44443 468999999887665543221 110 011236789999996 44443110 0000
Q ss_pred cccc---cc--c-cccccccCCCCCCCcccCCCCeEEEEeCCCCeE-EEeccc------CCCcceEEEecCCCEEEEEe-
Q 015463 203 QMQK---EN--I-PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT-TVLLRN------LQFPNGLSLSKDKSFFVFCE- 268 (406)
Q Consensus 203 ~~~~---~~--~-~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~~------~~~~ngi~l~~d~~~l~v~~- 268 (406)
.|.. .+ . ....+.- ...+. ......|+.+|.++++. ..+... ......++++||++.++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~-~~~G~---~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHY-PKAGS---ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp EEEECCCSSSSSCCCEEEEC-CBTTS---CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred eEEeeccCCcCCCcceeccC-CCCCC---CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence 0000 00 0 0000000 00000 01123689999988874 443321 12234688999998764442
Q ss_pred CC--CCeEEEEEeeCCCCcceeeeec-CCCC----CCceEECCCCC-EEE
Q 015463 269 GS--VGRLHKYWLIGEKAGNLEAFAI-LPGY----PDNVRTNEKGE-FWV 310 (406)
Q Consensus 269 t~--~~~i~~~~~~g~~~~~~~~~~~-l~g~----pd~i~~d~~G~-lwv 310 (406)
.. ...|+.+++.+.+. ..++.. ..+. +..+++++||+ |++
T Consensus 275 ~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 275 RAQNVSILTLCDATTGVC--TKKHEDESEAWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp TTSCEEEEEEEETTTCCE--EEEEEEECSSCCCCCCCCCEECTTSCSEEE
T ss_pred CCCCeEEEEEEeCCCCcc--eEEEEeccCCEEeccCCCceEcCCCCeEEE
Confidence 21 24577777654321 112211 1222 23678889998 444
No 234
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.81 E-value=0.002 Score=62.52 Aligned_cols=193 Identities=12% Similarity=0.020 Sum_probs=117.2
Q ss_pred cCcceEEEcCCCC-eeEEEecCCEEEEEeCCc--e--eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 69 QGPESMAFDPLGR-GPYTGVADGRILFWDGLK--W--TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 69 ~gpe~i~~d~~g~-~ly~g~~~g~I~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
....++++.+++. .+.++..+|.|..|+... . ..+.... ........+..+++.+.++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----------------~~~~h~~~v~~v~~~p~~~ 244 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKN-----------------IFTGHTAVVEDVAWHLLHE 244 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSE-----------------EECCCSSCEEEEEECSSCT
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccce-----------------eecCCCCCEeeeEEeCCCC
Confidence 3457899998877 789999999999998652 0 0000000 0111134467899988455
Q ss_pred cEEEE-eCCCcEEEEeCCCCe----EEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccC
Q 015463 144 DLYIA-DAYFGLMKVGPEGGL----ATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 144 ~L~Va-d~~~gl~~~d~~~~~----~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
+++++ ...+.|..+|..++. ...+. . ....++.+++.++|. ++++.+.
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~----~~~~v~~i~~~p~~~~~l~tg~~--------------------- 298 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVD-A----HTAEVNCLSFNPYSEFILATGSA--------------------- 298 (430)
T ss_dssp TEEEEEETTSEEEEEETTCSCSSSCSEEEE-C----CSSCEEEEEECSSCTTEEEEEET---------------------
T ss_pred CEEEEEeCCCeEEEEECCCCCCCcceeEee-c----CCCCeEEEEeCCCCCCEEEEEeC---------------------
Confidence 66544 445668899987652 11111 1 123478899999885 6665432
Q ss_pred CCCCCCcccCCCCeEEEEeCCCC-e-EEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCc---------c
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTK-Q-TTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAG---------N 286 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~-~-~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~---------~ 286 (406)
+|.|..||..+. + ...+.........++++|+++.++++....++|..+++...... .
T Consensus 299 -----------dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 299 -----------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp -----------TSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred -----------CCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 477888988762 2 33333233445689999999877777766788888887642110 0
Q ss_pred eeeeecC---CCCCCceEECCCCC-EEEEEccC
Q 015463 287 LEAFAIL---PGYPDNVRTNEKGE-FWVAIHCR 315 (406)
Q Consensus 287 ~~~~~~l---~g~pd~i~~d~~G~-lwv~~~~~ 315 (406)
.+.+... .+.+..++.+++|. +.++....
T Consensus 368 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 368 PELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp TTEEEECCCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred cceEEEcCCCCCCceEEEECCCCCCEEEEEECC
Confidence 1222222 22355678888888 66666544
No 235
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.81 E-value=0.002 Score=66.07 Aligned_cols=156 Identities=10% Similarity=-0.076 Sum_probs=93.6
Q ss_pred CcceEEEcCCCCeeEEEecC----------CEEEEEeCCc------eeEEEeecCCCccccCCCCCcccccccC-CcCCc
Q 015463 70 GPESMAFDPLGRGPYTGVAD----------GRILFWDGLK------WTDFAFTSNNRSELCNPKPIATSYLKNE-HICGR 132 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~----------g~I~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 132 (406)
...++++++||+.|++...+ ..|+.++.+. -... ... .....
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------------~l~~~~~~~ 189 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---------------------ELSDDAHRF 189 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---------------------ESSCSCSSE
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---------------------EEEecCCCc
Confidence 34678899999977766654 4677777542 1100 000 11123
Q ss_pred ceEEEEeCCCCc-EEEEeCC--------CcEEEEeCC-CC---eEEEcccccCCcccccccceEEcCCCCEEEEeCCCch
Q 015463 133 PLGLRFDKKTGD-LYIADAY--------FGLMKVGPE-GG---LATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNY 199 (406)
Q Consensus 133 p~gi~~d~~~g~-L~Vad~~--------~gl~~~d~~-~~---~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~ 199 (406)
..++++++ +|+ |+++... ..|+.+|.+ ++ +.+.+.... ...+..+++.+||++|++...
T Consensus 190 ~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----~~~~~~~~~spdg~l~~~~~~--- 261 (662)
T 3azo_A 190 VTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----EEAIAQAEWAPDGSLIVATDR--- 261 (662)
T ss_dssp ECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET----TBCEEEEEECTTSCEEEEECT---
T ss_pred ccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC----CceEcceEECCCCeEEEEECC---
Confidence 44568888 564 5444422 259999988 46 444443221 123567788999998887642
Q ss_pred hhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCC---------cceEEEecCCCEEEEEeCC
Q 015463 200 QRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQF---------PNGLSLSKDKSFFVFCEGS 270 (406)
Q Consensus 200 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~---------~ngi~l~~d~~~l~v~~t~ 270 (406)
.+...|+++|.++++.+.+...... ...+++++|++.++.+...
T Consensus 262 ---------------------------~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~ 314 (662)
T 3azo_A 262 ---------------------------TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKG 314 (662)
T ss_dssp ---------------------------TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSS
T ss_pred ---------------------------CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcC
Confidence 1123799999988887766432111 2467888888866665443
Q ss_pred CCeEEEEEeeC
Q 015463 271 VGRLHKYWLIG 281 (406)
Q Consensus 271 ~~~i~~~~~~g 281 (406)
..+||++++++
T Consensus 315 ~~~l~~~d~~~ 325 (662)
T 3azo_A 315 AAVLGILDPES 325 (662)
T ss_dssp SCEEEEEETTT
T ss_pred ccEEEEEECCC
Confidence 45677777653
No 236
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.81 E-value=0.004 Score=63.51 Aligned_cols=190 Identities=11% Similarity=0.004 Sum_probs=108.2
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLY 146 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~ 146 (406)
.|.+++++|+|+.+.++. ++.|..++.. . ...+. .+ ......++|++ +|++.
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~----------------------~h-~~~v~~~~~sp-dg~~l 74 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT----------------------EH-SHQTTVAKTSP-SGYYC 74 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEEC----------------------CC-SSCEEEEEECT-TSSEE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEec----------------------CC-CCceEEEEECC-CCcEE
Confidence 577889999999666665 5688888864 1 11110 11 23467899999 67644
Q ss_pred -EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcc
Q 015463 147 -IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 147 -Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
.++..+.|..+|..+++....... .+ ....+.++++++||...++.+..
T Consensus 75 asg~~d~~v~lWd~~~~~~~~~~~~-~~-~~~~v~~v~fs~dg~~l~~~~~~---------------------------- 124 (611)
T 1nr0_A 75 ASGDVHGNVRIWDTTQTTHILKTTI-PV-FSGPVKDISWDSESKRIAAVGEG---------------------------- 124 (611)
T ss_dssp EEEETTSEEEEEESSSTTCCEEEEE-EC-SSSCEEEEEECTTSCEEEEEECC----------------------------
T ss_pred EEEeCCCCEEEeECCCCcceeeEee-cc-cCCceEEEEECCCCCEEEEEECC----------------------------
Confidence 455556688888754321111000 01 01247889999999877665321
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeecCCCC---CCceEE
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGY---PDNVRT 302 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~l~g~---pd~i~~ 302 (406)
....+.++.+|.. .....+.......+.++++|++...+++....+.|..++... + +....+.+. ...+++
T Consensus 125 ~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~--~~~~~l~~H~~~V~~v~f 198 (611)
T 1nr0_A 125 RERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP---F--KFKSTFGEHTKFVHSVRY 198 (611)
T ss_dssp SSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT---B--EEEEEECCCSSCEEEEEE
T ss_pred CCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC---C--eEeeeeccccCceEEEEE
Confidence 0112456666642 122222222234568999999876556666667777777432 1 111122333 335678
Q ss_pred CCCCCEEEEEccCCcchh
Q 015463 303 NEKGEFWVAIHCRRSLYS 320 (406)
Q Consensus 303 d~~G~lwv~~~~~~~~~~ 320 (406)
+++|++.++......+..
T Consensus 199 spdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 199 NPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CTTSSEEEEEETTSCEEE
T ss_pred CCCCCEEEEEECCCcEEE
Confidence 899998777655544433
No 237
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.79 E-value=0.0021 Score=60.44 Aligned_cols=158 Identities=8% Similarity=0.028 Sum_probs=95.4
Q ss_pred cccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 67 QIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 67 ~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.-....++++.++|+.|.+++.++.|..|+.. ....+.... ...+....+++.+ +++
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~--------------------~h~~~v~~v~~sp-~~~ 118 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE--------------------GHENEVKSVAWAP-SGN 118 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC--------------------CCSSCEEEEEECT-TSS
T ss_pred cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc--------------------CCCCCceEEEEeC-CCC
Confidence 33445789999999989999999999888754 222221111 1124467899998 565
Q ss_pred E-EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 L-YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 L-~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
+ ..+...+.|..+|.+++..........+ ....+..+++.++|.+.++.+.
T Consensus 119 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~--------------------------- 170 (345)
T 3fm0_A 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASY--------------------------- 170 (345)
T ss_dssp EEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEEET---------------------------
T ss_pred EEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEEeC---------------------------
Confidence 4 4555556688888765432111111111 1124678899999987666432
Q ss_pred cccCCCCeEEEEeCCCCeEEE---ecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEe
Q 015463 224 KITKDTGRVLKYDPTTKQTTV---LLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWL 279 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~~~---~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~ 279 (406)
++.+..||..+++... +.........++++||++.+..+. ..+.|..++.
T Consensus 171 -----d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s-~D~~v~iW~~ 223 (345)
T 3fm0_A 171 -----DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS-DDRTVRIWRQ 223 (345)
T ss_dssp -----TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEE
T ss_pred -----CCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe-CCCeEEEecc
Confidence 3567777776665332 222223456899999998776554 3455655554
No 238
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.79 E-value=0.00073 Score=68.43 Aligned_cols=173 Identities=14% Similarity=-0.008 Sum_probs=95.8
Q ss_pred cceEEEcCCCCeeEEEe-cCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 71 PESMAFDPLGRGPYTGV-ADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~-~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..++++.+||+.|.++. .+|.+..|+.+ ..+.+.. +.......+++++ +..+|.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~----------------------~~~~~~~~~~~sp-d~~l~~ 80 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR----------------------EPINSVLDPHYGV-GRVILV 80 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS----------------------SCCSEECEECTTC-SEEEEE
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec----------------------ccccccccccCCC-CeEEEE
Confidence 46788889998665544 47766555422 2222110 0012344567777 444566
Q ss_pred EeC---CC--cEEEEeC--CCCeEEEcccccCCcccccccceEEcCCC--CEEEEeCCCchhhhccccccccccccccCC
Q 015463 148 ADA---YF--GLMKVGP--EGGLATSLATEAEGVPLRFTNDLDIDDEG--NVYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 148 ad~---~~--gl~~~d~--~~~~~~~l~~~~~~~~~~~~~~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
++. .. .|+.++. +++.. .+... .+ ....++.+|| .+|++...
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~-----~~~~~~s~dg~~~~~~s~~~---------------------- 131 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KP-----MRILSGVDTGEAVVFTGATE---------------------- 131 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCE-ECTTS-CS-----BEEEEEEECSSCEEEEEECS----------------------
T ss_pred eccCCCCcceEEEEEeccCCCccc-cccCC-CC-----ceeeeeCCCCCeEEEEecCC----------------------
Confidence 654 12 5778887 65543 33221 11 1233444555 45554432
Q ss_pred CCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCC---CCeEEEEEeeCCCCcceeeeecCCC
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~---~~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
+.+..||.++++.+.+..... ..+++||||+.++.+... ...|+++++.+. ..+.+..-.+
T Consensus 132 -----------~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g---~~~~l~~~~~ 195 (582)
T 3o4h_A 132 -----------DRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG---GLRVFDSGEG 195 (582)
T ss_dssp -----------SCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC---CCEEECCSSC
T ss_pred -----------CCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC---CceEeecCCC
Confidence 335577888888777654332 788999999998755432 146888887643 2233332233
Q ss_pred CCCceEECCCCCEEEE
Q 015463 296 YPDNVRTNEKGEFWVA 311 (406)
Q Consensus 296 ~pd~i~~d~~G~lwv~ 311 (406)
....+++++||+..++
T Consensus 196 ~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 196 SFSSASISPGMKVTAG 211 (582)
T ss_dssp EEEEEEECTTSCEEEE
T ss_pred ccccceECCCCCEEEE
Confidence 3356778899985543
No 239
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.0023 Score=68.77 Aligned_cols=191 Identities=15% Similarity=0.054 Sum_probs=118.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
....+++++++|+.+.+|+.+|.|..|+.......... .+ ......++|.+ +..|..+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~--------------------~~-~~~V~~l~fsp-g~~L~S~ 75 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL--------------------ED-RSAIKEMRFVK-GIYLVVI 75 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC--------------------SS-CCCEEEEEEET-TTEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc--------------------CC-CCCEEEEEEcC-CCEEEEE
Confidence 45689999999998899999999999987632221111 01 23357899998 4447777
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
...+.|..+|.++++...-.. . ...+..++++++|+..++.+.
T Consensus 76 s~D~~v~lWd~~~~~~~~~~~-~----~~~V~~v~~sp~g~~l~sgs~-------------------------------- 118 (902)
T 2oaj_A 76 NAKDTVYVLSLYSQKVLTTVF-V----PGKITSIDTDASLDWMLIGLQ-------------------------------- 118 (902)
T ss_dssp ETTCEEEEEETTTCSEEEEEE-C----SSCEEEEECCTTCSEEEEEET--------------------------------
T ss_pred ECcCeEEEEECCCCcEEEEEc-C----CCCEEEEEECCCCCEEEEEcC--------------------------------
Confidence 767789999998775432111 1 124678899999976665322
Q ss_pred CCeEEEEeCCCCeEEEec-----------c-cCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-c-CC
Q 015463 229 TGRVLKYDPTTKQTTVLL-----------R-NLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-I-LP 294 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~-----------~-~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~-l~ 294 (406)
+|.|..||.++++...+. . .......++++|++...+++....+.| .+++...+. ...+. . .+
T Consensus 119 dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~ 195 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPP 195 (902)
T ss_dssp TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCT
T ss_pred CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCC
Confidence 477999999887653221 1 112346899999754455555666777 877653211 11121 1 00
Q ss_pred ----------------CCCCceEECCCCCEEEEEccCCcchhh
Q 015463 295 ----------------GYPDNVRTNEKGEFWVAIHCRRSLYSH 321 (406)
Q Consensus 295 ----------------g~pd~i~~d~~G~lwv~~~~~~~~~~~ 321 (406)
+....+++.++|.+.++....+.+..+
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 112346778888877776555444443
No 240
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.76 E-value=0.0026 Score=69.37 Aligned_cols=147 Identities=16% Similarity=0.159 Sum_probs=92.0
Q ss_pred cceEEEcCCCCeeEEEecCCEEE-EEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EE
Q 015463 71 PESMAFDPLGRGPYTGVADGRIL-FWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LY 146 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~ 146 (406)
..++++. +|+.+++.+.+++|+ .++.. ....+. .....+..+++++ +|+ |+
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-----------------------~~~~~~~~~~~Sp-DG~~la 394 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-----------------------ENLGNVFAMGVDR-NGKFAV 394 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-----------------------CCCCSEEEEEECT-TSSEEE
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-----------------------CCccceeeeEECC-CCCEEE
Confidence 3456666 776566666667777 77755 222111 1124467889999 555 66
Q ss_pred EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCc-hhhhccccccccccccccCCCCCCCcc
Q 015463 147 IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTN-YQRRQMQKENIPLQLCSSLNDPSPIKI 225 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (406)
++.....|+.+|.++++...+.... ...+.++++.+||+..+..+... +.. .
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~----~~~v~~~~~SpDG~~la~~~~~~~~~~--------------~--------- 447 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSR----EAMITDFTISDNSRFIAYGFPLKHGET--------------D--------- 447 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECS----SSCCCCEEECTTSCEEEEEEEECSSTT--------------C---------
T ss_pred EECCCCeEEEEECCCCceEEeccCC----CCCccceEECCCCCeEEEEecCccccc--------------c---------
Confidence 6666668999999988776554221 12356889999997554432100 000 0
Q ss_pred cCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeC
Q 015463 226 TKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG 269 (406)
Q Consensus 226 ~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t 269 (406)
....+.|+.+|.++++...+.........+++++|++.+++...
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 01135799999998886666555555667899999998887754
No 241
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.74 E-value=0.00055 Score=63.77 Aligned_cols=154 Identities=12% Similarity=0.034 Sum_probs=89.5
Q ss_pred EEcCCCCeeEEEecCCEEEEEeCCcee-EEEeecCCCccccCCCCCcccccccCCcCCcceEEE----EeCCCCcEEEEe
Q 015463 75 AFDPLGRGPYTGVADGRILFWDGLKWT-DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLR----FDKKTGDLYIAD 149 (406)
Q Consensus 75 ~~d~~g~~ly~g~~~g~I~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~----~d~~~g~L~Vad 149 (406)
++.++++.++++..+|.|..|+..... ........ ..........++ +++++..|+++.
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~----------------~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV----------------QGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC----------------TTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc----------------CCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 346788889999999999999876111 11111000 000012244555 456333455555
Q ss_pred CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC---CCCEEEEeCCCchhhhccccccccccccccCCCCCCCccc
Q 015463 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD---EGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKIT 226 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~---dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 226 (406)
..+.|..+|.++++....... ...+..+++.+ +|+..++.+.
T Consensus 188 ~d~~i~i~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~------------------------------ 232 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSL------------------------------ 232 (357)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEES------------------------------
T ss_pred cCCeEEEEECccCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECC------------------------------
Confidence 556799999988875433211 12467889988 7776665432
Q ss_pred CCCCeEEEEeCCCCeEE-Ee-----cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 227 KDTGRVLKYDPTTKQTT-VL-----LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 227 ~~~g~l~~~d~~t~~~~-~~-----~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.+..||..+++.. .+ .........++++|+++.++++....+.|..+++..
T Consensus 233 --dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 233 --EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp --TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred --CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 367888877654311 01 122234567899999985556656667888888763
No 242
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.73 E-value=0.017 Score=54.80 Aligned_cols=200 Identities=12% Similarity=0.089 Sum_probs=108.0
Q ss_pred ccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 64 FLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 64 ~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
+.+.-....++++.++|+.+.+++.||.|..|+............ .......+++++ +|
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--------------------h~~~v~~~~~s~-~g 120 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL--------------------HCPWVMECAFAP-NG 120 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--------------------CCTTCCCCEECT-TS
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec--------------------CCCCEEEEEECC-CC
Confidence 344444567899999999899999999999999762111111100 022345678998 66
Q ss_pred cEEEEeC-CCcEEEEeCCCCeEEE----cccccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccC
Q 015463 144 DLYIADA-YFGLMKVGPEGGLATS----LATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 144 ~L~Vad~-~~gl~~~d~~~~~~~~----l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
++.++.. .+.+..++..+..... ......+- ...+..+.+.+++ ...++.+
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh-~~~v~~~~~~~~~~~~l~s~s---------------------- 177 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGH-KGYASSCQYVPDQETRLITGS---------------------- 177 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCC-SSCCCCCBCCSSSSSCEEEEC----------------------
T ss_pred CEEEEeeCCCcEEEEECCCCccccCCccceeeccCC-CcceEEEEEecCCCCEEEEEC----------------------
Confidence 6554433 3557777765421100 00000110 1234455555543 3333332
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecc-c-----CCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeCCCCcceeee
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLR-N-----LQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF 290 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~-----~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~ 290 (406)
.++.+..||..+++...... . ......+++.+ +++ ++++....+.|..+++.... .....+
T Consensus 178 ----------~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~sgs~D~~v~~wd~~~~~-~~~~~~ 245 (380)
T 3iz6_a 178 ----------GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN-MFISGSCDTTVRLWDLRITS-RAVRTY 245 (380)
T ss_dssp ----------TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC-EEEEEETTSCEEEEETTTTC-CCCEEE
T ss_pred ----------CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC-EEEEEECCCeEEEEECCCCC-cceEEE
Confidence 24778889988876543321 1 11224566655 555 44555556788888865211 111222
Q ss_pred ecCCCCCCceEECCCCCEEEEEccCCcch
Q 015463 291 AILPGYPDNVRTNEKGEFWVAIHCRRSLY 319 (406)
Q Consensus 291 ~~l~g~pd~i~~d~~G~lwv~~~~~~~~~ 319 (406)
..-.+....+++.++|.+.++......+.
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCR 274 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEE
Confidence 22223355678889998777765554443
No 243
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.72 E-value=0.00097 Score=72.72 Aligned_cols=178 Identities=13% Similarity=0.059 Sum_probs=110.2
Q ss_pred CcceEEEc-CCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCC-cceEEEEeCCCCcE
Q 015463 70 GPESMAFD-PLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICG-RPLGLRFDKKTGDL 145 (406)
Q Consensus 70 gpe~i~~d-~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~gi~~d~~~g~L 145 (406)
.+.+++++ ++|+.+.++. ++.|+.++.. ....+. ...+ .+..+++. ++..|
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~s-dg~~l 351 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVP-----------------------EPLRIRYVRRGGD-TKVAF 351 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECS-----------------------CCSCEEEEEECSS-SEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEcc-----------------------CCCcceEEeeeEc-CCCeE
Confidence 46889999 9998555554 7888888765 211110 0012 34456666 34456
Q ss_pred EEEeCCCcEE-EEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLM-KVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~-~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
+.+.....++ .++.++++.+.+. .. ...+..+++.+||+..+..+.
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~~~l~-~~----~~~~~~~~~SpDG~~la~~~~---------------------------- 398 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKAEKFE-EN----LGNVFAMGVDRNGKFAVVAND---------------------------- 398 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCEEECC-CC----CCSEEEEEECTTSSEEEEEET----------------------------
T ss_pred EEEECCCceEEEEECCCCCceEec-CC----ccceeeeEECCCCCEEEEECC----------------------------
Confidence 5555556788 8898888766554 11 134678899999975554321
Q ss_pred ccCCCCeEEEEeCCCCeEEEecccCC-CcceEEEecCCCEEEEEeCCC---------CeEEEEEeeCCCCcceeeeecCC
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLRNLQ-FPNGLSLSKDKSFFVFCEGSV---------GRLHKYWLIGEKAGNLEAFAILP 294 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~~~~-~~ngi~l~~d~~~l~v~~t~~---------~~i~~~~~~g~~~~~~~~~~~l~ 294 (406)
.+.|+.+|.++++...+..... ....++++||++.+.++.... ..|+.+++.+. ....+....
T Consensus 399 ----~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g---~~~~l~~~~ 471 (1045)
T 1k32_A 399 ----RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR---KIFAATTEN 471 (1045)
T ss_dssp ----TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---EEEECSCSS
T ss_pred ----CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC---cEEEeeCCC
Confidence 2679999999998877663333 347899999999887665422 47888887642 222221111
Q ss_pred CCCCceEECCCCC-EEEEE
Q 015463 295 GYPDNVRTNEKGE-FWVAI 312 (406)
Q Consensus 295 g~pd~i~~d~~G~-lwv~~ 312 (406)
.....++++++|+ ++.+.
T Consensus 472 ~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 472 SHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp SBEEEEEECTTSCEEEEEE
T ss_pred cccCCceEcCCCCEEEEEe
Confidence 1123466788887 45444
No 244
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.71 E-value=0.005 Score=59.78 Aligned_cols=153 Identities=14% Similarity=0.096 Sum_probs=92.3
Q ss_pred CcceEEEcC-CCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE-
Q 015463 70 GPESMAFDP-LGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL- 145 (406)
Q Consensus 70 gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L- 145 (406)
...++++.+ +++.|++++.||.|..||.. . ...+.... ........+++++ ++.+
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~~~l 224 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD--------------------TINIWFCSLDVSA-SSRMV 224 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS--------------------SCSCCCCCEEEET-TTTEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC--------------------CCCccEEEEEECC-CCCEE
Confidence 347889986 67889999999999999876 2 22221110 0012234678888 5654
Q ss_pred EEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCc
Q 015463 146 YIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
.+++..+.|..+|.++..+..+... ...++++++.+++. +.++.+.
T Consensus 225 ~~g~~dg~i~~wd~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~~~s~s~---------------------------- 271 (435)
T 4e54_B 225 VTGDNVGNVILLNMDGKELWNLRMH-----KKKVTHVALNPCCDWFLATASV---------------------------- 271 (435)
T ss_dssp EEECSSSBEEEEESSSCBCCCSBCC-----SSCEEEEEECTTCSSEEEEEET----------------------------
T ss_pred EEEeCCCcEeeeccCcceeEEEecc-----cceEEeeeecCCCceEEEEecC----------------------------
Confidence 4555556688999876654332211 13467889998875 4444321
Q ss_pred ccCCCCeEEEEeCCCCeEEE-ec--cc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 225 ITKDTGRVLKYDPTTKQTTV-LL--RN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~-~~--~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
++.|..||..+.+... +. .+ ....+.+++++|++.++.+. ..+.|..|++..
T Consensus 272 ----d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~-~D~~i~iwd~~~ 327 (435)
T 4e54_B 272 ----DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD-QKSEIRVYSASQ 327 (435)
T ss_dssp ----TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-SSSCEEEEESSS
T ss_pred ----cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc-CCCEEEEEECCC
Confidence 3556677766543211 11 11 12235678999998776554 457788888753
No 245
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.71 E-value=0.0023 Score=60.54 Aligned_cols=80 Identities=18% Similarity=0.130 Sum_probs=49.0
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEec-CCCEEEEEeCCC-----CeEEEEEeeCCCCcceeeeec-CCC-CCCce
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEGSV-----GRLHKYWLIGEKAGNLEAFAI-LPG-YPDNV 300 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~-d~~~l~v~~t~~-----~~i~~~~~~g~~~~~~~~~~~-l~g-~pd~i 300 (406)
...|+.+|.++++.+.+.........++++| |++.++++.... .+|+.+++++.+ ...+.. .++ .+..+
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccce
Confidence 4679999999888777665444556788999 777665554322 479999876432 111211 001 12335
Q ss_pred EECCCCC-EEEE
Q 015463 301 RTNEKGE-FWVA 311 (406)
Q Consensus 301 ~~d~~G~-lwv~ 311 (406)
+++++|+ |+.+
T Consensus 244 ~~spdg~~l~~~ 255 (396)
T 3c5m_A 244 FWIPDGSAMAYV 255 (396)
T ss_dssp EECTTSSCEEEE
T ss_pred EECCCCCEEEEE
Confidence 7788887 4444
No 246
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.70 E-value=0.015 Score=60.63 Aligned_cols=183 Identities=6% Similarity=-0.026 Sum_probs=90.6
Q ss_pred ceEEEcCCCCeeEEEecC---------CEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 72 ESMAFDPLGRGPYTGVAD---------GRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~---------g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
.++.+++||+.+.+++.+ +.++.++.. +.+.+ ....+.....+++|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-----------------------~~~~~~~~~~~~SP 121 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-----------------------ERIPNNTQWVTWSP 121 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-----------------------SCCCTTEEEEEECS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc-----------------------ccCCCcceeeEECC
Confidence 347889999977776654 455566654 11111 01112345678898
Q ss_pred CCCc-EEEEeCCCcEEEEeCCCCeEEEccccc-CCcc-------------cccccceEEcCCCC-EEEEeCCCchhhhcc
Q 015463 141 KTGD-LYIADAYFGLMKVGPEGGLATSLATEA-EGVP-------------LRFTNDLDIDDEGN-VYFTDSSTNYQRRQM 204 (406)
Q Consensus 141 ~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~-~~~~-------------~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~ 204 (406)
+|+ |..+ ..+.|+.++..++..+.+.... .... +.....+...+||+ |.++.... ...+.|
T Consensus 122 -dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~-~~v~~~ 198 (740)
T 4a5s_A 122 -VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND-TEVPLI 198 (740)
T ss_dssp -STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC-TTCCEE
T ss_pred -CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc-cCCceE
Confidence 565 4333 4567999998888766554221 1101 12234578899996 44442110 000000
Q ss_pred c----cccc-ccccccc-C-CCCCCCcccCCCCeEEEEeCCC---C---eEEEecc------cCCCcceEEEecCCCEEE
Q 015463 205 Q----KENI-PLQLCSS-L-NDPSPIKITKDTGRVLKYDPTT---K---QTTVLLR------NLQFPNGLSLSKDKSFFV 265 (406)
Q Consensus 205 ~----~~~~-~~~~~~e-~-~~~~~~~~~~~~g~l~~~d~~t---~---~~~~~~~------~~~~~ngi~l~~d~~~l~ 265 (406)
. .... ......+ + .+.+ .......|+.+|.++ + +...+.. .-.....++++||++.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~yp~~G---~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 199 EYSFYSDESLQYPKTVRVPYPKAG---AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp EEEECCSTTCSSCEEEEEECCBTT---SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred EEEeecCCCCCCCcceeecCCCCc---CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 0 0000 0000000 0 0000 001123689999988 7 5555432 122234678999998544
Q ss_pred EE-eCCC--CeEEEEEeeCCC
Q 015463 266 FC-EGSV--GRLHKYWLIGEK 283 (406)
Q Consensus 266 v~-~t~~--~~i~~~~~~g~~ 283 (406)
+. .... ..|+.+++++.+
T Consensus 276 ~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 276 QWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEESSTTEEEEEEEEEETTT
T ss_pred EEeCCCCCEEEEEEEECCCCc
Confidence 33 2221 268888887543
No 247
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.70 E-value=0.002 Score=66.87 Aligned_cols=100 Identities=10% Similarity=-0.020 Sum_probs=58.2
Q ss_pred cceEEEcCCCCeeEEEec---------CCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 71 PESMAFDPLGRGPYTGVA---------DGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~---------~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
..++++++||+.+.+++. ++.|+.++.+.-+... ..........+++++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~---------------------~~~l~~~~~~~~~SP- 119 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR---------------------GNELPRPIQYLCWSP- 119 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---------------------SSCCCSSBCCEEECS-
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc---------------------ceecCcccccceECC-
Confidence 678999999997666654 5778888765111100 000012345678999
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeEEEccccc-CCcc-------------cccccceEEcCCCCEEE
Q 015463 142 TGDLYIADAYFGLMKVGPEGGLATSLATEA-EGVP-------------LRFTNDLDIDDEGNVYF 192 (406)
Q Consensus 142 ~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~-~~~~-------------~~~~~~l~~d~dG~ly~ 192 (406)
+|+..+....+.|+.++..+++...+.... .... +.....++..+||+..+
T Consensus 120 DG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la 184 (719)
T 1z68_A 120 VGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLA 184 (719)
T ss_dssp STTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEE
T ss_pred CCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEE
Confidence 665333334568999999887765543211 0000 11225789999996443
No 248
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.70 E-value=0.0065 Score=56.48 Aligned_cols=164 Identities=9% Similarity=-0.026 Sum_probs=103.9
Q ss_pred eeccCcccCcceEEEcCC----CCeeEEEecCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcce
Q 015463 62 IKFLNQIQGPESMAFDPL----GRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL 134 (406)
Q Consensus 62 ~~~~~~~~gpe~i~~d~~----g~~ly~g~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 134 (406)
.+.++.-....++++.++ ...++++..++.|..|+.. ....+..... ........
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~------------------~~~~~~v~ 73 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD------------------ADADENFY 73 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC------------------SCTTCCEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc------------------cCCCCcEE
Confidence 444444455678888863 3457788888889888865 2222221110 00124467
Q ss_pred EEEEeCCC----Cc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhcccccc
Q 015463 135 GLRFDKKT----GD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQKEN 208 (406)
Q Consensus 135 gi~~d~~~----g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~~~~ 208 (406)
.+++.+ + +. |+++...+.|..+|..+++........ ...+.++++.+ ++++.++.+.
T Consensus 74 ~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~------------ 136 (366)
T 3k26_A 74 TCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH----GNAINELKFHPRDPNLLLSVSK------------ 136 (366)
T ss_dssp EEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC----CSCEEEEEECSSCTTEEEEEET------------
T ss_pred EEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC----CCcEEEEEECCCCCCEEEEEeC------------
Confidence 888887 4 33 556665567899998877543322211 23477889998 8887776432
Q ss_pred ccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec----ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 209 IPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 209 ~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~----~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.|..||..+++..... ........++++++++.++.+.. .+.|..+++..
T Consensus 137 --------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 192 (366)
T 3k26_A 137 --------------------DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM-DHSLKLWRINS 192 (366)
T ss_dssp --------------------TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET-TSCEEEEESCS
T ss_pred --------------------CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecC-CCCEEEEECCC
Confidence 477999999888765543 22234568899999987766554 57888888763
No 249
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.001 Score=67.04 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=94.2
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC-c-e-----eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL-K-W-----TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTG 143 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g 143 (406)
-.+++++++|+.|++++.+|.|..|+.. + . ..+...... ...+ .+....+++.+ +|
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~---------------~~gh-~~~V~sVawSP-dg 194 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS---------------DAGS-KDWVTHIVWYE-DV 194 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS---------------CTTC-CCCEEEEEEET-TE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc---------------cccc-cccEEEEEEcC-Cc
Confidence 5689999999999999999999999976 2 1 011111000 0001 24578899999 77
Q ss_pred cEEEEeCCCcEEEEeCCCCeEEEccccc-CCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 144 DLYIADAYFGLMKVGPEGGLATSLATEA-EGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 144 ~L~Vad~~~gl~~~d~~~~~~~~l~~~~-~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
|..+..++.+..++.++++........ .+ ....+.++++. |+..++.+
T Consensus 195 -Laass~D~tVrlWd~~~~~~~~~~~tL~~~-h~~~V~svaFs--g~~LASa~--------------------------- 243 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSHQPVSRMIQNA-SRRKITDLKIV--DYKVVLTC--------------------------- 243 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSSCCCEEEEECC-CSSCCCCEEEE--TTEEEEEC---------------------------
T ss_pred -EEEEeCCCeEEEEECCCCccccceeeeccc-ccCcEEEEEEE--CCEEEEEe---------------------------
Confidence 777777788999999877632100000 11 11357788887 45555543
Q ss_pred CcccCCCCeEEEEeCCCCeEEEec-ccCCCcceEEE--ecCCCEEEEEe
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLL-RNLQFPNGLSL--SKDKSFFVFCE 268 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~~ngi~l--~~d~~~l~v~~ 268 (406)
.+.+..||.++++...+. ......+++++ ++|+..+.++.
T Consensus 244 ------~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 244 ------PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp ------SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred ------CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 268999999988875555 33344578999 99997666654
No 250
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0021 Score=61.35 Aligned_cols=200 Identities=9% Similarity=0.075 Sum_probs=114.9
Q ss_pred cCcceEEEcCC-CCeeEEEecCCEEEEEeCCcee-------EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGLKWT-------DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 69 ~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
....++++.++ ++.++++..+|.|..|+..... .+... ...........+++.+
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG------------------QSMSSVDEVISLAWNQ 175 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC------------------CSCCSSCCCCEEEECS
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc------------------cccCCCCCeeEEEeCC
Confidence 34578999987 7878899999999999875111 11000 0111234567899998
Q ss_pred CCCcEEEE-eCCCcEEEEeCCCCeEEEcccccCC--cccccccceEEcCCC-CEEEEeCCCchhhhcccccccccccccc
Q 015463 141 KTGDLYIA-DAYFGLMKVGPEGGLATSLATEAEG--VPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 141 ~~g~L~Va-d~~~gl~~~d~~~~~~~~l~~~~~~--~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
+++.++++ ...+.|..+|.++++.......... .....+.++++.++| .++++.+..
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------------- 236 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS------------------- 236 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC-------------------
T ss_pred CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC-------------------
Confidence 42565554 4445699999887754332211100 002357889999987 566554320
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCe-EEEecc--cCCCcceEEEec-CCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQ-TTVLLR--NLQFPNGLSLSK-DKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 292 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~-~~~~~~--~~~~~ngi~l~~-d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~ 292 (406)
...+.|..||..++. ...... .......+++++ +++.++.+. ..+.|..+++... .....+..
T Consensus 237 ----------~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~dg~v~~wd~~~~--~~~~~~~~ 303 (416)
T 2pm9_A 237 ----------DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG-RDNTVLLWNPESA--EQLSQFPA 303 (416)
T ss_dssp ----------SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE-SSSEEEEECSSSC--CEEEEEEC
T ss_pred ----------CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe-CCCCEEEeeCCCC--ccceeecC
Confidence 011268888887642 211122 223456789998 777665554 4678888886532 11112222
Q ss_pred CCCCCCceEECCCC-CEEEEEccCCcc
Q 015463 293 LPGYPDNVRTNEKG-EFWVAIHCRRSL 318 (406)
Q Consensus 293 l~g~pd~i~~d~~G-~lwv~~~~~~~~ 318 (406)
-.+....+++.++| .+.++....+.+
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcE
Confidence 23345678888888 666665544433
No 251
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.67 E-value=0.015 Score=60.30 Aligned_cols=157 Identities=14% Similarity=0.069 Sum_probs=88.0
Q ss_pred ceEEEcCCCCeeEEEe-cCC----EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc
Q 015463 72 ESMAFDPLGRGPYTGV-ADG----RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD 144 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~-~~g----~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~ 144 (406)
.++++++||+.+..+. .+| .|+.++.+ +....... .....++++.+++..
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-----------------------~~~~~~~~wspDg~~ 184 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-----------------------RVKFSCMAWTHDGKG 184 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-----------------------EECSCCEEECTTSSE
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-----------------------CcccceEEEEeCCCE
Confidence 4678999999654443 333 78888866 22221110 011345788883345
Q ss_pred EEEEeCCCc----------------EEEEeCCCCeEE--EcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccc
Q 015463 145 LYIADAYFG----------------LMKVGPEGGLAT--SLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 145 L~Vad~~~g----------------l~~~d~~~~~~~--~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~ 205 (406)
|+.+..... |++++..+++.+ .+.... . ...+..++.+.+||+ |.++....
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-~-~~~~~~~~~~SpDg~~l~~~~~~~-------- 254 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-D-EPKWMGGAELSDDGRYVLLSIREG-------- 254 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-T-CTTCEEEEEECTTSCEEEEEEECS--------
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC-C-CCeEEEEEEEcCCCCEEEEEEEcc--------
Confidence 666654433 899988776521 111111 0 012345778899996 44443210
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCC------C--eEEEecccCCCcceEEEecCCCEEEEEeCC---CCeE
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTT------K--QTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRL 274 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t------~--~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~---~~~i 274 (406)
......|+.+|.++ + ..+.+....... ...+++|++.+++.... ..+|
T Consensus 255 --------------------~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l 313 (710)
T 2xdw_A 255 --------------------CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRL 313 (710)
T ss_dssp --------------------SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEE
T ss_pred --------------------CCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEE
Confidence 01135688888775 4 345554332222 23578899988887543 3479
Q ss_pred EEEEeeCC
Q 015463 275 HKYWLIGE 282 (406)
Q Consensus 275 ~~~~~~g~ 282 (406)
+++++++.
T Consensus 314 ~~~d~~~~ 321 (710)
T 2xdw_A 314 INIDFTDP 321 (710)
T ss_dssp EEEETTSC
T ss_pred EEEeCCCC
Confidence 99987654
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.66 E-value=0.0022 Score=64.67 Aligned_cols=72 Identities=7% Similarity=-0.116 Sum_probs=52.8
Q ss_pred ccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCe------------EE
Q 015463 177 RFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ------------TT 243 (406)
Q Consensus 177 ~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~------------~~ 243 (406)
..|.++.+++||+ +|+++.. ...+..||.++.+ ..
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~--------------------------------s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKL--------------------------------SPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTT--------------------------------SSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred CCceEEEEcCCCCEEEEeCCC--------------------------------CCeEEEEECcccccccccccCcccceE
Confidence 3688999999996 6666532 3668888877542 22
Q ss_pred EecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 244 VLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 244 ~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.-..--..|.++++++|| .+|++..-.+.|.+++++.
T Consensus 325 ~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 325 AEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 222333578899999999 8999988889999999764
No 253
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.64 E-value=0.0066 Score=57.24 Aligned_cols=134 Identities=16% Similarity=0.248 Sum_probs=81.1
Q ss_pred CcEEEEeCC-CcEEEEeCCCCeEEEcccccCCcccccccceEEcCC----C----CEEEEeCCCchhhhccccccccccc
Q 015463 143 GDLYIADAY-FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE----G----NVYFTDSSTNYQRRQMQKENIPLQL 213 (406)
Q Consensus 143 g~L~Vad~~-~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d----G----~ly~t~~~~~~~~~~~~~~~~~~~~ 213 (406)
..++|++.. .||+.||.++..+..+.. ..+|.+.+-++ | .+++++..
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~----------------- 95 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRS----------------- 95 (355)
T ss_dssp GCEEEEEETTTEEEEEETTSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECS-----------------
T ss_pred ccEEEEEcCCCCEEEEcCCCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCC-----------------
Confidence 345666544 689999997776665421 23555555431 2 13444421
Q ss_pred cccCCCCCCCcccCCCCe--EEEEeCCCCeEEEec-------ccCCCcceEEE--ecC-CC-EEEEEeCCCCeEEEEEee
Q 015463 214 CSSLNDPSPIKITKDTGR--VLKYDPTTKQTTVLL-------RNLQFPNGLSL--SKD-KS-FFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 214 ~~e~~~~~~~~~~~~~g~--l~~~d~~t~~~~~~~-------~~~~~~ngi~l--~~d-~~-~l~v~~t~~~~i~~~~~~ 280 (406)
.+.++ ++.+||++++++.+. ..+..+.|+|+ +++ ++ ++|++.. .+++..|.+.
T Consensus 96 -------------~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~ 161 (355)
T 3amr_A 96 -------------EGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELK 161 (355)
T ss_dssp -------------TTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEE
T ss_pred -------------CCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEE
Confidence 00244 455598888877663 33477899999 554 43 4666654 4789998876
Q ss_pred CCCCc--ceeeee--cCCCCCCceEECC-CCCEEEEEcc
Q 015463 281 GEKAG--NLEAFA--ILPGYPDNVRTNE-KGEFWVAIHC 314 (406)
Q Consensus 281 g~~~~--~~~~~~--~l~g~pd~i~~d~-~G~lwv~~~~ 314 (406)
....+ ..+... .+++-|.+++.|+ .|.||++...
T Consensus 162 ~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 162 ADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp ECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc
Confidence 32222 122222 3667788999985 5789999864
No 254
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.62 E-value=0.013 Score=53.96 Aligned_cols=189 Identities=14% Similarity=0.143 Sum_probs=108.7
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC-CcEEEE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-GDLYIA 148 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~-g~L~Va 148 (406)
......+.++++.++++..++.+..++........... .........+++.++. ..+.++
T Consensus 130 ~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 130 DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-------------------ESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS-------------------SSCSSCEEEEEECSCSSSCEEEE
T ss_pred ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe-------------------ccccCcccceEEccCCCCcEEEE
Confidence 34455666777778889999999888866222211110 0011234456665522 234433
Q ss_pred -eCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 -DAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 -d~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
.....|..+|..+++........ ...++++++.++|++.++.+.
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~------------------------------- 235 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGH----TGYLNTVTVSPDGSLCASGGK------------------------------- 235 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEET-------------------------------
T ss_pred EcCCCEEEEEECCCCceeeEecCC----CCcEEEEEECCCCCEEEEEeC-------------------------------
Confidence 33456888898877654322111 134678999999988776532
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc---eee-eecCCCCC---Cce
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN---LEA-FAILPGYP---DNV 300 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~---~~~-~~~l~g~p---d~i 300 (406)
+|.+..||..+.+.............+++++++..+..+. .+.|..+++.+...-. .+. .....+.+ ..+
T Consensus 236 -Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 312 (340)
T 4aow_A 236 -DGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT--GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 312 (340)
T ss_dssp -TCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred -CCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccC--CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence 4789999998876655444445567788998887554443 4678888776421100 000 00112223 346
Q ss_pred EECCCCCEEEEEccC
Q 015463 301 RTNEKGEFWVAIHCR 315 (406)
Q Consensus 301 ~~d~~G~lwv~~~~~ 315 (406)
+++++|++.++....
T Consensus 313 ~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 313 AWSADGQTLFAGYTD 327 (340)
T ss_dssp EECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEeCC
Confidence 778999877665443
No 255
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.012 Score=56.68 Aligned_cols=164 Identities=11% Similarity=0.149 Sum_probs=95.2
Q ss_pred cCcccCcceEEEcC-CCCeeEEEecCCEEEEEeCCc---eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 65 LNQIQGPESMAFDP-LGRGPYTGVADGRILFWDGLK---WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 65 ~~~~~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
++.-....++++.+ +|+.+.+++.+|.|..|+... -..+. |. .... ..+....+++.+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------~~--------~~~~-h~~~v~~~~~~~ 121 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS---------SS--------LTYD-CSSTVTQITMIP 121 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS---------CS--------EEEE-CSSCEEEEEECT
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc---------ee--------eecc-CCCCEEEEEEeC
Confidence 33334568899999 999899999999999998541 00000 00 0001 134567899998
Q ss_pred CCCc-EEEEeCCCcEEEEeCC---CCeEEEccccc--CCc------ccccccceE--EcCCCCEEEEeCCCchhhhcccc
Q 015463 141 KTGD-LYIADAYFGLMKVGPE---GGLATSLATEA--EGV------PLRFTNDLD--IDDEGNVYFTDSSTNYQRRQMQK 206 (406)
Q Consensus 141 ~~g~-L~Vad~~~gl~~~d~~---~~~~~~l~~~~--~~~------~~~~~~~l~--~d~dG~ly~t~~~~~~~~~~~~~ 206 (406)
+++ |..+...+.|..+|.+ +++........ ... ....+..+. ..++|.+.++.+
T Consensus 122 -~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------- 189 (437)
T 3gre_A 122 -NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT----------- 189 (437)
T ss_dssp -TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-----------
T ss_pred -CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-----------
Confidence 554 5666655667777663 23222111100 000 011222333 345665555532
Q ss_pred ccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEeccc---CCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 207 ENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRN---LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 207 ~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~---~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
.+|.|..||..+++....... ......++++++++.++.+. ..+.|..+++.
T Consensus 190 ---------------------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 244 (437)
T 3gre_A 190 ---------------------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIR 244 (437)
T ss_dssp ---------------------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETT
T ss_pred ---------------------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcC
Confidence 247899999988776544332 24557899999998776554 45778888875
No 256
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.59 E-value=0.0064 Score=62.90 Aligned_cols=152 Identities=9% Similarity=0.017 Sum_probs=81.8
Q ss_pred ceEEEEeCCCCcEEEEeCC-----CcEEEEeCCCCeEEEccccc-CCcccccccceEEcCCCC-EEEE-eCCCchhhhcc
Q 015463 133 PLGLRFDKKTGDLYIADAY-----FGLMKVGPEGGLATSLATEA-EGVPLRFTNDLDIDDEGN-VYFT-DSSTNYQRRQM 204 (406)
Q Consensus 133 p~gi~~d~~~g~L~Vad~~-----~gl~~~d~~~~~~~~l~~~~-~~~~~~~~~~l~~d~dG~-ly~t-~~~~~~~~~~~ 204 (406)
...+++.+ +|++++.... ..|+.+|.++++...+.... .+........+++.+||+ |++. ....+.
T Consensus 257 ~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~----- 330 (723)
T 1xfd_A 257 ITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG----- 330 (723)
T ss_dssp EEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS-----
T ss_pred eEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC-----
Confidence 45688999 7876543321 24888999888765543221 111000123678999996 5554 311000
Q ss_pred ccccccccccccCCCCCCCcccCCCCeEEEEe-CCCCe---EEEecccCCCc-ceEEEecCCCEEEEEeCCC----CeEE
Q 015463 205 QKENIPLQLCSSLNDPSPIKITKDTGRVLKYD-PTTKQ---TTVLLRNLQFP-NGLSLSKDKSFFVFCEGSV----GRLH 275 (406)
Q Consensus 205 ~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d-~~t~~---~~~~~~~~~~~-ngi~l~~d~~~l~v~~t~~----~~i~ 275 (406)
......|+.+| ..+++ .+.+..+.... ..+++++|++.++++.... .+||
T Consensus 331 ---------------------~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 331 ---------------------RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp ---------------------SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred ---------------------CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 00123689998 45555 44444322222 2368999999998776542 3566
Q ss_pred EEEeeCCCCcceeeeec-C--CCCCCceEECCCCCEEEEEc
Q 015463 276 KYWLIGEKAGNLEAFAI-L--PGYPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 276 ~~~~~g~~~~~~~~~~~-l--~g~pd~i~~d~~G~lwv~~~ 313 (406)
.++..+.. ....+.. + .+....+.++++|+.++...
T Consensus 390 ~~~~~~~~--~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 390 SANTVGNF--NRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EECSSTTC--CCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EEeCCCCC--CcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 66554321 1111211 1 12244677889998666543
No 257
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.58 E-value=0.0029 Score=58.62 Aligned_cols=105 Identities=14% Similarity=-0.010 Sum_probs=63.3
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC-c-eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-CC-c
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL-K-WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TG-D 144 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-~g-~ 144 (406)
....+++++++|+.|.+++.|+.|..|+.. . ...+.... ...+....+++.+. ++ .
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~--------------------gH~~~V~~v~~~~~~~~~~ 73 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR--------------------GHEGPVWQVAWAHPMYGNI 73 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE--------------------CCSSCEEEEEECCGGGSSC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc--------------------CCCccEEEEEeCCCCCCCE
Confidence 344688999999989999999999998854 2 11111111 01234667888641 24 4
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeC
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDS 195 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~ 195 (406)
|..+...+.|..+|.++++....... .+ ....++++++.++ |.+.++.+
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~V~~v~~~p~~~g~~lasgs 124 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEH-AG-HDSSVNSVCWAPHDYGLILACGS 124 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEE-CC-CSSCCCEEEECCTTTCSCEEEEC
T ss_pred EEEEECCCEEEEEECCCCcceEEEEc-cC-CCCceEEEEECCCCCCcEEEEEc
Confidence 55666667788999887632211111 11 1135778899886 66666543
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.55 E-value=0.026 Score=52.37 Aligned_cols=150 Identities=9% Similarity=-0.004 Sum_probs=86.5
Q ss_pred cCcceEEEcCCCCeeEEEecC---C--EEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 69 QGPESMAFDPLGRGPYTGVAD---G--RILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~---g--~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
....+++++|+|+.+++...+ + .|+.++.+ ..+.+... .. ..++++.++
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-----------------------~~-~~~~~wspd 114 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-----------------------KN-IRSLEWNED 114 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-----------------------SE-EEEEEECTT
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-----------------------CC-ccceeECCC
Confidence 345678999999855544332 2 47888765 22222111 12 456778873
Q ss_pred CCcEEEEeC---------------------------CCcEEEEeCCCCeE-EEcccccCCcccccccceEEcCCCCEEEE
Q 015463 142 TGDLYIADA---------------------------YFGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFT 193 (406)
Q Consensus 142 ~g~L~Vad~---------------------------~~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~dG~ly~t 193 (406)
+..|+++.. ...|++++.++++. +.+.. + .+..+++.+|| ++++
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~ 186 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVN 186 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEE
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEE
Confidence 334555532 13589999988876 54432 1 45678889999 7766
Q ss_pred eCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCC---
Q 015463 194 DSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS--- 270 (406)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~--- 270 (406)
.....- ... ..+...|+.+| +++.+.+... ... ..++||++.+++....
T Consensus 187 ~~~~~~--~~~---------------------~~~~~~l~~~d--~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 187 VPHREI--IPQ---------------------YFKFWDIYIWE--DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKK 238 (347)
T ss_dssp EECCCS--SCC---------------------SSCCEEEEEEE--TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSS
T ss_pred Eecccc--ccc---------------------ccccccEEEeC--CCceEEeccC-cce--eeECCCCCEEEEEEccccC
Confidence 421000 000 00134699999 6777666544 222 2348999988776533
Q ss_pred ----CCeEEEEE
Q 015463 271 ----VGRLHKYW 278 (406)
Q Consensus 271 ----~~~i~~~~ 278 (406)
..+|+.++
T Consensus 239 ~~~~~~~l~~~d 250 (347)
T 2gop_A 239 YMSEHNKLYIYD 250 (347)
T ss_dssp CCCSSCEEEEEC
T ss_pred CccccceEEEEC
Confidence 24788877
No 259
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.53 E-value=0.0031 Score=55.35 Aligned_cols=119 Identities=15% Similarity=0.043 Sum_probs=73.6
Q ss_pred cccccceeccCcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCC-cCCc
Q 015463 56 LLQNSEIKFLNQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEH-ICGR 132 (406)
Q Consensus 56 ~l~~~~~~~~~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 132 (406)
=+.++.++-..+.....+++++++|. ||.- .+|.++++++. .-..+.... . .+.. .-+.
T Consensus 28 ~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~-t---------------~IG~~Gw~~ 89 (236)
T 1tl2_A 28 WLARATLIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRA-K---------------KIGNGGWNQ 89 (236)
T ss_dssp HHHHSEEEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHC-E---------------EEECSCGGG
T ss_pred hhhhccccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccc-c---------------Eeccccccc
Confidence 35677777776678888999999998 8887 88999999863 100000000 0 0000 0011
Q ss_pred ceEEEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccc---cCCcccccccceEEcCCCCEEEEe
Q 015463 133 PLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE---AEGVPLRFTNDLDIDDEGNVYFTD 194 (406)
Q Consensus 133 p~gi~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~---~~~~~~~~~~~l~~d~dG~ly~t~ 194 (406)
=..+.||+ +|.||+.+ ...|+|+++.+..-...... +...-......|.++++|.||..+
T Consensus 90 F~a~~fD~-~G~LYav~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 90 FQFLFFDP-NGYLYAVS-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CSEEEECT-TSCEEEEE-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ceEEEECC-CCCEEEeC-CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 24688998 99999994 46799999843211111111 001112345778999999999987
No 260
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.53 E-value=0.00054 Score=69.41 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=79.2
Q ss_pred CCcceEEEEeCCCCcEEEEeCC----------------------CcEEEEeCCCCe-------EEEcccc----------
Q 015463 130 CGRPLGLRFDKKTGDLYIADAY----------------------FGLMKVGPEGGL-------ATSLATE---------- 170 (406)
Q Consensus 130 ~~~p~gi~~d~~~g~L~Vad~~----------------------~gl~~~d~~~~~-------~~~l~~~---------- 170 (406)
..||-++.+++.++.+|++... +.|++++++++. ...+...
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 5789999999878999998653 248898765432 1111100
Q ss_pred -------cCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEE
Q 015463 171 -------AEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTT 243 (406)
Q Consensus 171 -------~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~ 243 (406)
.....+..|..|++|++|+|||++.+.......+ .......++.+++.++++.
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~--------------------~~~gnn~~~~~~~~~g~~~ 522 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDF--------------------AGMGNNQMLCADPATGEIR 522 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGG--------------------TTTCSCEEEEECTTTCCEE
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccc--------------------cccccceEEEEeCCCCeEE
Confidence 0112466889999999999999975421111111 0223467999999999998
Q ss_pred EecccC--CCcceEEEecCCCEEEEE
Q 015463 244 VLLRNL--QFPNGLSLSKDKSFFVFC 267 (406)
Q Consensus 244 ~~~~~~--~~~ngi~l~~d~~~l~v~ 267 (406)
.++..- ....|++++||++++|+.
T Consensus 523 rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 523 RFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCccCcCeeECCCCCEEEEE
Confidence 887543 334699999999998875
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.50 E-value=0.02 Score=53.89 Aligned_cols=64 Identities=9% Similarity=0.082 Sum_probs=39.0
Q ss_pred CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee--cCCC---CCCceEE--CCCCC-EEEEEcc
Q 015463 250 QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA--ILPG---YPDNVRT--NEKGE-FWVAIHC 314 (406)
Q Consensus 250 ~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~--~l~g---~pd~i~~--d~~G~-lwv~~~~ 314 (406)
..+.|+++++....||+++.. ..||+|+.+.....+.+++. ...+ -+.|+++ .++|+ ++++...
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred CCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 467799999989999999986 66999996632211222222 1222 2457776 45555 4444443
No 262
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0077 Score=63.16 Aligned_cols=194 Identities=11% Similarity=0.052 Sum_probs=108.7
Q ss_pred cCcceEEEcCC--CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC--C
Q 015463 69 QGPESMAFDPL--GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK--T 142 (406)
Q Consensus 69 ~gpe~i~~d~~--g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~--~ 142 (406)
....++++.++ |+.+.+++.+|.|..|+.. .+....... ........+++.++ .
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~--------------------~h~~~V~~v~~sp~~~~ 113 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA--------------------VHSASVNSVQWAPHEYG 113 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC--------------------CCSSCEEEEEECCGGGC
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc--------------------CCCCCeEEEEECCCCCC
Confidence 34567888776 8889999999999999865 222222111 11244678899883 2
Q ss_pred CcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcC-------------CCCEEEEeCCCchhhhccccccc
Q 015463 143 GDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDD-------------EGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 143 g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~-------------dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
..++++...+.|..+|..++........ .+ ....+..+++.+ +|.+.++.+
T Consensus 114 ~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs-------------- 177 (753)
T 3jro_A 114 PLLLVASSDGKVSVVEFKENGTTSPIII-DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-------------- 177 (753)
T ss_dssp SEEEEEETTSEEEEEECCSSSCCCCEEE-EC-CSSCEEEEEECCCC---------CGGGCCEEEEE--------------
T ss_pred CEEEEEeCCCcEEEEEeecCCCcceeEe-ec-CCCceEEEEecCcccccccccccCCCCCEEEEEE--------------
Confidence 3456666556788888876521111100 01 112456677776 355444432
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCe----EEE-ecccCCCcceEEEecC---CCEEEEEeCCCCeEEEEEeeC
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ----TTV-LLRNLQFPNGLSLSKD---KSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~----~~~-~~~~~~~~ngi~l~~d---~~~l~v~~t~~~~i~~~~~~g 281 (406)
.+|.|..||..++. ... +...-.....++++|+ ++.+ ++....+.|..+++..
T Consensus 178 ------------------~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l-~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 178 ------------------ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ------------------TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEESSSCEEEEEESS
T ss_pred ------------------CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE-EEEecCCEEEEecCCC
Confidence 24678888766552 111 1122234568999999 6655 4444567888888764
Q ss_pred CCCcceeeeec---CCCCCCceEECCCCCEEEEEccCCc
Q 015463 282 EKAGNLEAFAI---LPGYPDNVRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 282 ~~~~~~~~~~~---l~g~pd~i~~d~~G~lwv~~~~~~~ 317 (406)
........... ..+....++++++|.+.++....+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 32111111111 2233456788888886655444333
No 263
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.053 Score=50.24 Aligned_cols=155 Identities=10% Similarity=0.028 Sum_probs=89.8
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCc-------eeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLK-------WTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT 142 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~ 142 (406)
...++++.++|+.+.+++.++.|..|+... ...... .....+....+++++ +
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~--------------------~~~h~~~V~~v~~sp-~ 118 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI--------------------IEGHENEVKGVAWSN-D 118 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEE--------------------EC----CEEEEEECT-T
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEE--------------------EcCCCCcEEEEEECC-C
Confidence 457899999999888999999999998641 011110 011124467899998 5
Q ss_pred CcE-EEEeCCCcEEEEeCC-CCe-EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCC
Q 015463 143 GDL-YIADAYFGLMKVGPE-GGL-ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLND 219 (406)
Q Consensus 143 g~L-~Vad~~~gl~~~d~~-~~~-~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (406)
|++ ..+...+.|..+|.. ++. .+.+.. ..+ ....++++++.++|.+.++.+.
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~-~~~-h~~~v~~v~~~p~~~~l~s~s~----------------------- 173 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISV-LQE-HSQDVKHVIWHPSEALLASSSY----------------------- 173 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEE-ECC-CSSCEEEEEECSSSSEEEEEET-----------------------
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEE-ecc-CCCceEEEEECCCCCEEEEEcC-----------------------
Confidence 654 445555668888873 221 111111 111 1134778899999988777542
Q ss_pred CCCCcccCCCCeEEEEeCCCCeEE---EecccCCCcceEEEecC--CCEEEEEeCCCCeEEEEEee
Q 015463 220 PSPIKITKDTGRVLKYDPTTKQTT---VLLRNLQFPNGLSLSKD--KSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 220 ~~~~~~~~~~g~l~~~d~~t~~~~---~~~~~~~~~ngi~l~~d--~~~l~v~~t~~~~i~~~~~~ 280 (406)
++.+..+|..++..+ .+.........++++++ +..+ ++....+.|..+++.
T Consensus 174 ---------D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 174 ---------DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL-CSGSDDSTVRVWKYM 229 (330)
T ss_dssp ---------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE-EEEETTSCEEEEEEE
T ss_pred ---------CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE-EEEeCCCeEEEEEec
Confidence 356777776555322 22222233467889988 4334 444445667666665
No 264
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.47 E-value=0.03 Score=52.74 Aligned_cols=155 Identities=11% Similarity=0.036 Sum_probs=92.3
Q ss_pred cCcceEEEcC-CCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC--CC-c
Q 015463 69 QGPESMAFDP-LGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK--TG-D 144 (406)
Q Consensus 69 ~gpe~i~~d~-~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~--~g-~ 144 (406)
....++++.+ +++.+++++.+|.|..|+........... .......+.+.+. ++ .
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ 158 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---------------------FEETVYSHHMSPVSTKHCL 158 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---------------------CSSCEEEEEECSSCSSCCE
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---------------------CCCceeeeEeecCCCCCcE
Confidence 3457888888 67778889999999999976222111110 0122345556542 12 4
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 145 LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
++++...+.|..+|..+++....... ....+.++++.++|. ++++.+.
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ll~~~~~--------------------------- 207 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSCSHILQG----HRQEILAVSWSPRYDYILATASA--------------------------- 207 (408)
T ss_dssp EEEEESSSSEEEEESSSSCCCEEECC----CCSCEEEEEECSSCTTEEEEEET---------------------------
T ss_pred EEEEcCCCeEEEEeCCCcceeeeecC----CCCcEEEEEECCCCCcEEEEEcC---------------------------
Confidence 66666667799999876643221111 122467889999886 5554322
Q ss_pred cccCCCCeEEEEeCCCCe--EEEe---------------cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 224 KITKDTGRVLKYDPTTKQ--TTVL---------------LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~--~~~~---------------~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
+|.+..||..++. ...+ .........+++++|++.++.+.. .+.|..+++..
T Consensus 208 -----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~ 276 (408)
T 4a11_B 208 -----DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNSSN 276 (408)
T ss_dssp -----TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred -----CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEECCC
Confidence 3667778776543 1111 011122457889999987766654 57788888764
No 265
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.46 E-value=0.0012 Score=66.03 Aligned_cols=125 Identities=18% Similarity=0.312 Sum_probs=77.6
Q ss_pred eccCcccCcceEEEcC-CCCeeEEEecC----------------------CEEEEEeCC---------ceeEEEeecCCC
Q 015463 63 KFLNQIQGPESMAFDP-LGRGPYTGVAD----------------------GRILFWDGL---------KWTDFAFTSNNR 110 (406)
Q Consensus 63 ~~~~~~~gpe~i~~d~-~g~~ly~g~~~----------------------g~I~~~~~~---------~~~~~~~~~~~~ 110 (406)
+-...+..||.+++++ +|. +|+...+ |.|++|..+ .|..+...+...
T Consensus 378 vGAT~mdRpEdi~v~p~~g~-vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~ 456 (592)
T 4a9v_A 378 VGATRMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPS 456 (592)
T ss_dssp TTCCCEECEEEEEECTTTCC-EEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTT
T ss_pred cCCccccCccceeEcCCCCE-EEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCc
Confidence 3345678899999997 455 7776422 889999753 244444322110
Q ss_pred ccccCCCCCccc--ccccCCcCCcceEEEEeCCCCcEEEEeCC-------------CcEEEEeCCCCeEEEcccccCCcc
Q 015463 111 SELCNPKPIATS--YLKNEHICGRPLGLRFDKKTGDLYIADAY-------------FGLMKVGPEGGLATSLATEAEGVP 175 (406)
Q Consensus 111 ~~~~~~~~~~~~--~~~~~~~~~~p~gi~~d~~~g~L~Vad~~-------------~gl~~~d~~~~~~~~l~~~~~~~~ 175 (406)
.. .. ..... ........+.|.+|+|++ +|+|||++.. ++++++++++++++.+.... .
T Consensus 457 ~~--~~-~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---~ 529 (592)
T 4a9v_A 457 VH--AG-TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---I 529 (592)
T ss_dssp TS--TT-SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---T
T ss_pred cc--cc-ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---C
Confidence 00 00 00000 000112357799999999 8999994422 26999999989888776432 2
Q ss_pred cccccceEEcCCC-CEEEEeC
Q 015463 176 LRFTNDLDIDDEG-NVYFTDS 195 (406)
Q Consensus 176 ~~~~~~l~~d~dG-~ly~t~~ 195 (406)
...++++++.+|+ .||++..
T Consensus 530 ~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 530 GCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp TCEEEEEEECTTSSEEEEEEE
T ss_pred CccccCCEECCCCCEEEEEEe
Confidence 3458999999998 5777753
No 266
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.44 E-value=0.017 Score=55.58 Aligned_cols=217 Identities=11% Similarity=0.026 Sum_probs=115.9
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCcc---------------------ccCCCCCccccc
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSE---------------------LCNPKPIATSYL 124 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~ 124 (406)
+.-....++++.++|+.+.+|+.+|.|..|+....+.+......... ............
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA 224 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeE
Confidence 34456789999999999999999999999987611111110000000 000000000000
Q ss_pred ccCCcCCcceEEEEeCCCCc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhh
Q 015463 125 KNEHICGRPLGLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRR 202 (406)
Q Consensus 125 ~~~~~~~~p~gi~~d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~ 202 (406)
..........++.+.+ +++ +..+...+.+..++..+++...............+..++..+++ ++.++..
T Consensus 225 ~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~------- 296 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG------- 296 (420)
T ss_dssp EEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE-------
T ss_pred EecccccceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe-------
Confidence 0011123345666666 444 44444445566777655432110000000011234566666654 4444321
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeC-CCCeEEEEEeeC
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEG-SVGRLHKYWLIG 281 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t-~~~~i~~~~~~g 281 (406)
+..++.|..||..+++.............++++++++.++.+.. ..+.|..++...
T Consensus 297 -----------------------gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 297 -----------------------GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp -----------------------CTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred -----------------------ecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 22357789999998887665555556667889999988876642 346788887642
Q ss_pred CCCcceeeeecCCCCCC---ceEECCCCCEEEEEccCCcc
Q 015463 282 EKAGNLEAFAILPGYPD---NVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 282 ~~~~~~~~~~~l~g~pd---~i~~d~~G~lwv~~~~~~~~ 318 (406)
.+.+..+.|..+ .++++++|.+.++......+
T Consensus 354 -----~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tv 388 (420)
T 4gga_A 354 -----MAKVAELKGHTSRVLSLTMSPDGATVASAAADETL 388 (420)
T ss_dssp -----CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE
T ss_pred -----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE
Confidence 122333344333 46788999877766554443
No 267
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.42 E-value=0.081 Score=53.53 Aligned_cols=42 Identities=21% Similarity=0.259 Sum_probs=27.4
Q ss_pred ceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEecC
Q 015463 352 LHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 395 (406)
Q Consensus 352 ~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~ 395 (406)
..+.+.++|. +|+.+..+....+... ...+...+|++|++..
T Consensus 483 ~dg~l~a~D~~tG~~lw~~~~~~~~~~--~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 483 LDGYLKALDNKDGKELWNFKMPSGGIG--SPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCS--CCEEEEETTEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCCcEe--eeEEEEECCEEEEEEE
Confidence 3456788884 5899988876544321 1122357999999875
No 268
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.40 E-value=0.1 Score=50.02 Aligned_cols=81 Identities=5% Similarity=-0.100 Sum_probs=40.3
Q ss_pred CCeEEEEeCCCCeE-----EEecccCCCcceEEEecCCCEEEEEe--CCCCeEEEEEeeCCCCcceeeeecCCCCCCceE
Q 015463 229 TGRVLKYDPTTKQT-----TVLLRNLQFPNGLSLSKDKSFFVFCE--GSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVR 301 (406)
Q Consensus 229 ~g~l~~~d~~t~~~-----~~~~~~~~~~ngi~l~~d~~~l~v~~--t~~~~i~~~~~~g~~~~~~~~~~~l~g~pd~i~ 301 (406)
+|.+..++..+++. ............+++++++..++.+. +..+.|..+++.. +..............+.
T Consensus 251 D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t---~~~~~~~~~~~~v~~~~ 327 (420)
T 4gga_A 251 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GACLSAVDAHSQVCSIL 327 (420)
T ss_dssp TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT---TEEEEEEECSSCEEEEE
T ss_pred cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc---cccceeeccccceeeee
Confidence 36677777765542 11222222335678888776665543 2345677777643 22111111222233455
Q ss_pred ECCCCCEEEEE
Q 015463 302 TNEKGEFWVAI 312 (406)
Q Consensus 302 ~d~~G~lwv~~ 312 (406)
..++++..++.
T Consensus 328 ~~~~~~~lv~~ 338 (420)
T 4gga_A 328 WSPHYKELISG 338 (420)
T ss_dssp EETTTTEEEEE
T ss_pred ecCCCCeEEEE
Confidence 56677755544
No 269
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.39 E-value=0.042 Score=50.06 Aligned_cols=186 Identities=10% Similarity=0.060 Sum_probs=99.9
Q ss_pred cceEEEcC--CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC-Cc-
Q 015463 71 PESMAFDP--LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-GD- 144 (406)
Q Consensus 71 pe~i~~d~--~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~-g~- 144 (406)
..++++.+ +|+.+.+++.||.|..|+.. .+...... .........+++.++. +.
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~--------------------~~h~~~v~~v~~~p~~~g~~ 115 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH--------------------AVHSASVNSVQWAPHEYGPM 115 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE--------------------CCCSSCEEEEEECCGGGCSE
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe--------------------ecCCCceeEEEeCcCCCCcE
Confidence 46777764 47878899999999999865 11111110 0012335678888731 44
Q ss_pred EEEEeCCCcEEEEeCCCCeE---EEcccccCCcccccccceEEcCC-------------CCEEEEeCCCchhhhcccccc
Q 015463 145 LYIADAYFGLMKVGPEGGLA---TSLATEAEGVPLRFTNDLDIDDE-------------GNVYFTDSSTNYQRRQMQKEN 208 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~~~~~---~~l~~~~~~~~~~~~~~l~~d~d-------------G~ly~t~~~~~~~~~~~~~~~ 208 (406)
|..+...+.|..+|.+++.. ..+. + ....++.+++.++ ++++++.+
T Consensus 116 l~s~s~d~~v~~wd~~~~~~~~~~~~~----~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs------------- 177 (297)
T 2pm7_B 116 LLVASSDGKVSVVEFKENGTTSPIIID----A-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG------------- 177 (297)
T ss_dssp EEEEETTSEEEEEEBCSSSCBCCEEEE----C-CSSCEEEEEECCCC------------CCEEEEEE-------------
T ss_pred EEEEECCCcEEEEEecCCCceeeeeee----c-ccCccceEeecCCcccccccCCCCCCcceEEEEc-------------
Confidence 55566556678888765421 1111 0 0123556666665 33444432
Q ss_pred ccccccccCCCCCCCcccCCCCeEEEEeCCCCe----EE-EecccCCCcceEEEecCC--CEEEEEeCCCCeEEEEEeeC
Q 015463 209 IPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ----TT-VLLRNLQFPNGLSLSKDK--SFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 209 ~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~----~~-~~~~~~~~~ngi~l~~d~--~~l~v~~t~~~~i~~~~~~g 281 (406)
.++.|..+|..+++ .. .+...-...+.++++|++ ..++++....+.|..+++..
T Consensus 178 -------------------~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 178 -------------------ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -------------------TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred -------------------CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 24667777765543 21 222222345789999985 34556655567787777764
Q ss_pred CCCcc-eeeeecCCCCC---CceEECCCCCEEEEEcc
Q 015463 282 EKAGN-LEAFAILPGYP---DNVRTNEKGEFWVAIHC 314 (406)
Q Consensus 282 ~~~~~-~~~~~~l~g~p---d~i~~d~~G~lwv~~~~ 314 (406)
..... ...+ ...+++ ..++++++|++.++...
T Consensus 239 ~~~~~~~~~~-~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 239 EQGPWKKTLL-KEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp TTSCCEEEES-SSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred CCCccceeee-ecccCCCcEEEEEECCCCCEEEEEcC
Confidence 21111 1122 112223 34567888886665543
No 270
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.37 E-value=0.032 Score=51.43 Aligned_cols=190 Identities=7% Similarity=-0.030 Sum_probs=97.2
Q ss_pred CcceEEEcC--CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCC-Cc
Q 015463 70 GPESMAFDP--LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKT-GD 144 (406)
Q Consensus 70 gpe~i~~d~--~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~-g~ 144 (406)
...++++.+ +|+.+.+++.|+.|..|+.. .+....... ........+++.+++ +.
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~--------------------~h~~~V~~v~~~p~~~g~ 118 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA--------------------GHDSSVNSVCWAPHDYGL 118 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC--------------------CCSSCCCEEEECCTTTCS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc--------------------CCCCceEEEEECCCCCCc
Confidence 346778864 47778999999999999875 222221111 012345688998731 44
Q ss_pred -EEEEeCCCcEEEEeCCCCe-EEEcccccCCcccccccceEEcCCC-----------------CEEEEeCCCchhhhccc
Q 015463 145 -LYIADAYFGLMKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDDEG-----------------NVYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 145 -L~Vad~~~gl~~~d~~~~~-~~~l~~~~~~~~~~~~~~l~~d~dG-----------------~ly~t~~~~~~~~~~~~ 205 (406)
|..+...+.|..++..++. ..... ...+ ....++.++..+++ .++++
T Consensus 119 ~lasgs~D~~i~lwd~~~~~~~~~~~-~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s------------ 184 (316)
T 3bg1_A 119 ILACGSSDGAISLLTYTGEGQWEVKK-INNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFAS------------ 184 (316)
T ss_dssp CEEEECSSSCEEEEEECSSSCEEECC-BTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEEC------------
T ss_pred EEEEEcCCCCEEEEecCCCCCcceee-eecc-ccCCcceEEEccccCCccccccccccCccccceEEE------------
Confidence 4445445567777776542 22111 1111 11234566666652 22222
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCC-eEEEe--cccC-CCcceEEEecCC---CEEEEEeCCCCeEEEEE
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK-QTTVL--LRNL-QFPNGLSLSKDK---SFFVFCEGSVGRLHKYW 278 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~--~~~~-~~~ngi~l~~d~---~~l~v~~t~~~~i~~~~ 278 (406)
+..++.+..+|..++ +.+.. ..+. ...+.++++|++ ..++++....+.|..++
T Consensus 185 --------------------gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 185 --------------------GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp --------------------CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred --------------------ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 233466666666533 22211 2222 234678999986 12445555567788887
Q ss_pred eeCCCCcc--eeeeecCCCCCCceEECCCCCEEEEEc
Q 015463 279 LIGEKAGN--LEAFAILPGYPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 279 ~~g~~~~~--~~~~~~l~g~pd~i~~d~~G~lwv~~~ 313 (406)
+.....+. ...+....+....++++++|++.++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence 65421111 112221222233566777777555443
No 271
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.31 E-value=0.025 Score=54.88 Aligned_cols=146 Identities=12% Similarity=0.105 Sum_probs=91.8
Q ss_pred EEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcE
Q 015463 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (406)
Q Consensus 75 ~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl 154 (406)
.+.++++.+++++.+|.|..|+....+.+.... ........++++++...++.+...+.|
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS--------------------GHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--------------------CCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 345677889999999999999976322222111 012446788999833445666666679
Q ss_pred EEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEE
Q 015463 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLK 234 (406)
Q Consensus 155 ~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~ 234 (406)
..+|.++++........ ...+..+.++ +...++.+. +|.|..
T Consensus 335 ~vwd~~~~~~~~~~~~h----~~~v~~~~~~--~~~l~s~s~--------------------------------dg~v~v 376 (464)
T 3v7d_B 335 RIWDLENGELMYTLQGH----TALVGLLRLS--DKFLVSAAA--------------------------------DGSIRG 376 (464)
T ss_dssp EEEETTTTEEEEEECCC----SSCEEEEEEC--SSEEEEEET--------------------------------TSEEEE
T ss_pred EEEECCCCcEEEEEeCC----CCcEEEEEEc--CCEEEEEeC--------------------------------CCcEEE
Confidence 99999877643221111 1235566665 445444322 478999
Q ss_pred EeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 235 YDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 235 ~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
||..+++.............++++++++.+.... .+.|..+++.
T Consensus 377 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~ 420 (464)
T 3v7d_B 377 WDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS--ENQFNIYNLR 420 (464)
T ss_dssp EETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE--TTEEEEEETT
T ss_pred EECCCCceeeeecCCCCccEEEEEeCCCEEEEec--CCeEEEEECC
Confidence 9998776544333334455678999998776554 5788888865
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.27 E-value=0.11 Score=52.60 Aligned_cols=118 Identities=14% Similarity=0.119 Sum_probs=65.1
Q ss_pred CCCeeEEEec-CCEEEEEeC-C-ceeEEEeecCCCcc----ccCCCCCcccccccCCcCC-cceEEEEeCCCCcEEEEeC
Q 015463 79 LGRGPYTGVA-DGRILFWDG-L-KWTDFAFTSNNRSE----LCNPKPIATSYLKNEHICG-RPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 79 ~g~~ly~g~~-~g~I~~~~~-~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~p~gi~~d~~~g~L~Vad~ 150 (406)
+|. +|+++. ++.|+.+|. . .-............ .| |. ...+++++ ++.+|+++.
T Consensus 62 ~g~-vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~---------------~~~~~~~~~~~--~~~v~v~~~ 123 (571)
T 2ad6_A 62 GDM-MYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMC---------------CDVVDRGLAYG--AGQIVKKQA 123 (571)
T ss_dssp TTE-EEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCT---------------TCSCCCCCEEE--TTEEEEECT
T ss_pred CCE-EEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcccccccc---------------ccccccccEEE--CCEEEEEeC
Confidence 454 999988 899999998 5 32222221111000 01 10 01134555 689999987
Q ss_pred CCcEEEEeCCCCeEEEcccccCCcc--cccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 151 YFGLMKVGPEGGLATSLATEAEGVP--LRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 151 ~~gl~~~d~~~~~~~~l~~~~~~~~--~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
...|+.+|.++|+..--... .+.. .......++. +|.+|++..... ...
T Consensus 124 dg~l~alD~~tG~~~W~~~~-~~~~~~~~~~~~P~v~-~g~v~vg~~~~~---------------------------~~~ 174 (571)
T 2ad6_A 124 NGHLLALDAKTGKINWEVEV-CDPKVGSTLTQAPFVA-KDTVLMGCSGAE---------------------------LGV 174 (571)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCGGGTCBCCSCCEEE-TTEEEEECBCGG---------------------------GTC
T ss_pred CCEEEEEECCCCCEEEEecC-CCCCccceeccCCEEE-CCEEEEEecCCc---------------------------cCC
Confidence 77899999988865321111 1100 0111122233 678999874310 012
Q ss_pred CCeEEEEeCCCCeEE
Q 015463 229 TGRVLKYDPTTKQTT 243 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~ 243 (406)
.|.|+.+|++||+..
T Consensus 175 ~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 175 RGAVNAFDLKTGELK 189 (571)
T ss_dssp CCEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEE
Confidence 478999999988754
No 273
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.25 E-value=0.044 Score=51.54 Aligned_cols=115 Identities=10% Similarity=-0.038 Sum_probs=67.2
Q ss_pred eEEEEeC-CCCcEEEEeCC------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccc
Q 015463 134 LGLRFDK-KTGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 134 ~gi~~d~-~~g~L~Vad~~------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~ 205 (406)
..+.+++ +++.|+++... ..|+.++.++++.+.+... .+...+..+++.+||+ |+++....
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~~~~spdg~~l~~~~~~~-------- 259 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCTHEFWIPDGSAMAYVSYFK-------- 259 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEEEEEECTTSSCEEEEEEET--------
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCccccceEECCCCCEEEEEecCC--------
Confidence 3556766 23335444322 2588888877765554331 1122356678899996 55553210
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEec-CCCEEEEEeC---------------
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSK-DKSFFVFCEG--------------- 269 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~-d~~~l~v~~t--------------- 269 (406)
+...+.|+.+|.++++.+.+... ...+ +++++ |++.++++..
T Consensus 260 --------------------~~~~~~l~~~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 260 --------------------GQTDRVIYKANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp --------------------TTCCEEEEEECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred --------------------CCccceEEEEECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 11123499999988877655421 1222 78899 9996665431
Q ss_pred CCCeEEEEEeeC
Q 015463 270 SVGRLHKYWLIG 281 (406)
Q Consensus 270 ~~~~i~~~~~~g 281 (406)
....|+++++.+
T Consensus 318 ~~~~i~~~d~~~ 329 (396)
T 3c5m_A 318 NDPFLYVLNTKA 329 (396)
T ss_dssp CCCEEEEEETTT
T ss_pred CCCcEEEEeccc
Confidence 236788888764
No 274
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.25 E-value=0.002 Score=66.89 Aligned_cols=135 Identities=10% Similarity=0.014 Sum_probs=83.7
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYI 147 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~V 147 (406)
+.++.+.++|. ++....++.|+.++.. ..+.+.... .. .......+++++ +|+ |..
T Consensus 18 ~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~-----------------~~--~~~~~~~~~~Sp-Dg~~la~ 76 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNR-----------------TM--KSVNASNYGLSP-DRQFVYL 76 (719)
T ss_dssp CCCCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHH-----------------HH--HTTTCSEEEECT-TSSEEEE
T ss_pred CCccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccc-----------------cc--cccceeeEEECC-CCCeEEE
Confidence 34778889997 5555578899999876 322222110 00 001145788999 665 444
Q ss_pred EeC---------CCcEEEEeCCCCeE---EEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhcccccccccccc
Q 015463 148 ADA---------YFGLMKVGPEGGLA---TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 148 ad~---------~~gl~~~d~~~~~~---~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
+.. ...|+.+|.++++. ..+. ..+..+++.+||+ |.++.
T Consensus 77 ~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SPDG~~la~~~-------------------- 128 (719)
T 1z68_A 77 ESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSPVGSKLAYVY-------------------- 128 (719)
T ss_dssp EEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECSSTTCEEEEE--------------------
T ss_pred EecCceeEEeecceEEEEEECCCCccccceecC--------cccccceECCCCCEEEEEE--------------------
Confidence 433 24689999988865 3221 2366789999995 44442
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccC-------------------CCcceEEEecCCCEEEEEe
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNL-------------------QFPNGLSLSKDKSFFVFCE 268 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-------------------~~~ngi~l~~d~~~l~v~~ 268 (406)
.+.|+.+|..+++...+.... ....++++||||+.++++.
T Consensus 129 --------------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 129 --------------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp --------------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred --------------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 146888888777765543211 1124799999999887764
No 275
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.24 E-value=0.009 Score=58.91 Aligned_cols=158 Identities=18% Similarity=0.209 Sum_probs=88.9
Q ss_pred CcceEEEEeCCCC--cEEEEeCCCcEEEEeCCCCeE-EEcc---ccc-CC---cccccccceEEcCC----CCEEEEeCC
Q 015463 131 GRPLGLRFDKKTG--DLYIADAYFGLMKVGPEGGLA-TSLA---TEA-EG---VPLRFTNDLDIDDE----GNVYFTDSS 196 (406)
Q Consensus 131 ~~p~gi~~d~~~g--~L~Vad~~~gl~~~d~~~~~~-~~l~---~~~-~~---~~~~~~~~l~~d~d----G~ly~t~~~ 196 (406)
..|.+|++.+ +| +|||+.....|+++++++... +.+. ... .+ .....+.+|+++++ |.||++-+.
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 5699999998 66 599999877799998765421 1111 111 11 01234567999985 899998532
Q ss_pred CchhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--------eEEEec-----ccCCCcceEEEecCCCE
Q 015463 197 TNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--------QTTVLL-----RNLQFPNGLSLSKDKSF 263 (406)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~-----~~~~~~ngi~l~~d~~~ 263 (406)
..-. +. .+ + .....+|.||....+ +.+++. ...++...|++.||+.
T Consensus 93 ~~~~---~~-~~-----------~-----~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~- 151 (463)
T 2wg3_C 93 NQER---WA-IG-----------P-----HDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF- 151 (463)
T ss_dssp CCCS---SC-SS-----------S-----SCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-
T ss_pred CCCC---cc-cC-----------C-----cccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-
Confidence 0000 00 00 0 000125666654321 122222 1223445799999995
Q ss_pred EEEEeCC-----------------CCeEEEEEeeCCC-------------C----cceeeeecCCCCCCceEECCC----
Q 015463 264 FVFCEGS-----------------VGRLHKYWLIGEK-------------A----GNLEAFAILPGYPDNVRTNEK---- 305 (406)
Q Consensus 264 l~v~~t~-----------------~~~i~~~~~~g~~-------------~----~~~~~~~~l~g~pd~i~~d~~---- 305 (406)
||++--. .+.|+|++++|.. . ...++|+-.-.-|-++++|+.
T Consensus 152 LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~ 231 (463)
T 2wg3_C 152 LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDI 231 (463)
T ss_dssp EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSST
T ss_pred EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCc
Confidence 7887321 3579999998731 0 124666643334889999986
Q ss_pred -CCEEE
Q 015463 306 -GEFWV 310 (406)
Q Consensus 306 -G~lwv 310 (406)
|.||+
T Consensus 232 ~G~l~~ 237 (463)
T 2wg3_C 232 NINLTI 237 (463)
T ss_dssp TCSEEE
T ss_pred ccceEE
Confidence 66554
No 276
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.23 E-value=0.026 Score=52.17 Aligned_cols=220 Identities=11% Similarity=0.032 Sum_probs=107.7
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE--eCCCCc-E
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF--DKKTGD-L 145 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~--d~~~g~-L 145 (406)
....++++.++|+.+++++.+|.|..|+........... .......+++ ++ +++ |
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---------------------~~~~v~~~~~~~~~-~~~~l 144 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ---------------------HDAPVKTIHWIKAP-NYSCV 144 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------------------CSSCEEEEEEEECS-SCEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc---------------------ccCceEEEEEEeCC-CCCEE
Confidence 345788999999989999999999999976211111110 0233567888 76 565 5
Q ss_pred EEEeCCCcEEEEeCCCCeEE-EcccccCC--cccccccceEEcCCCCEEEEeCCCchh-hhccc---cccccccccccC-
Q 015463 146 YIADAYFGLMKVGPEGGLAT-SLATEAEG--VPLRFTNDLDIDDEGNVYFTDSSTNYQ-RRQMQ---KENIPLQLCSSL- 217 (406)
Q Consensus 146 ~Vad~~~gl~~~d~~~~~~~-~l~~~~~~--~~~~~~~~l~~d~dG~ly~t~~~~~~~-~~~~~---~~~~~~~~~~e~- 217 (406)
+.+...+.|..+|..+++.. .+...... .......-+....++.+.+-+...... ..... ........+...
T Consensus 145 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (368)
T 3mmy_A 145 MTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK 224 (368)
T ss_dssp EEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT
T ss_pred EEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC
Confidence 55555567888998766422 11111000 000011112223344444333211000 00000 000000000000
Q ss_pred -CCCCCCcccCCCCeEEEEeCCCCeE----EEecccCC------------CcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 218 -NDPSPIKITKDTGRVLKYDPTTKQT----TVLLRNLQ------------FPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 218 -~~~~~~~~~~~~g~l~~~d~~t~~~----~~~~~~~~------------~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
..+..+..+..+|.+..||..+... ..+..... ....+++++|++.++.+. ..+.|..+++.
T Consensus 225 ~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~ 303 (368)
T 3mmy_A 225 QNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKD 303 (368)
T ss_dssp TSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETT
T ss_pred CCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECC
Confidence 0000022355567788888776521 11111111 356789999998776654 45788888875
Q ss_pred CCCCcceeeeecCCCCCCceEECCCCCEEEEEc
Q 015463 281 GEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIH 313 (406)
Q Consensus 281 g~~~~~~~~~~~l~g~pd~i~~d~~G~lwv~~~ 313 (406)
..+ ....+..-.+....++++++|.+.++..
T Consensus 304 ~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 304 ART--KLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp TTE--EEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred CCc--EEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 311 1111111122334678899998666554
No 277
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.22 Score=50.06 Aligned_cols=175 Identities=8% Similarity=-0.024 Sum_probs=97.0
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCC--c--------eeEEEeecCCCccccCCCCCcccc-cccCCcCCcceEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGL--K--------WTDFAFTSNNRSELCNPKPIATSY-LKNEHICGRPLGLR 137 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~gi~ 137 (406)
.+-+++++.+||+.+-+++.|+.|. ++. + +..+.....+.-....-....+.. ....+ .....+++
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~-~~~V~~va 92 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQP-VCYPRVCK 92 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSC-SCCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCC-CCcEEEEE
Confidence 5789999999999666667777665 433 1 112222111110000000000000 01112 34467899
Q ss_pred EeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 138 FDKKTGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 138 ~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
+++++..|-+++..+.+..++.++ ....+. .....+-..+.++++.+||++.++.+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs---------------------- 148 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN---------------------- 148 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE----------------------
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc----------------------
Confidence 999444477777667788888554 333322 11111123477899999997665542
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCe--------EEEec---cc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCC
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQ--------TTVLL---RN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEK 283 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~--------~~~~~---~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~ 283 (406)
.+|.|..||.+++. +..+. .+ ......++++||+ +..+ ...+.+..+++++..
T Consensus 149 ----------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laas-s~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 149 ----------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAA-LSNNSVFSMTVSASS 213 (588)
T ss_dssp ----------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEE-ETTCCEEEECCCSSS
T ss_pred ----------CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEE-eCCCeEEEEECCCCc
Confidence 24789999988874 23332 11 1244689999998 4343 445778888877543
No 278
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.15 Score=47.22 Aligned_cols=155 Identities=13% Similarity=0.010 Sum_probs=87.3
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcE-E
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDL-Y 146 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L-~ 146 (406)
.-.++.++++ .+.+++.++.|..|+.. ......... .....+....+++.+ ++++ .
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~------------------~~~h~~~v~~v~~sp-~~~~la 74 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD------------------ETAHKKAIRSVAWRP-HTSLLA 74 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC------------------TTCCCSCEEEEEECT-TSSEEE
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe------------------cCCccCCEEEEEECC-CCCEEE
Confidence 3456777665 68899999999999865 222221110 000123467899998 5664 4
Q ss_pred EEeCCCcEEEEeCCCCeE-----EEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCC
Q 015463 147 IADAYFGLMKVGPEGGLA-----TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPS 221 (406)
Q Consensus 147 Vad~~~gl~~~d~~~~~~-----~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (406)
.+...+.|..++.+.... ..+.. ..+ ....+.++++.++|++.++.+.
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~-~~~-h~~~V~~v~~sp~g~~las~s~------------------------- 127 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAI-IEG-HENEVKGVAWSNDGYYLATCSR------------------------- 127 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEE-EC-----CEEEEEECTTSCEEEEEET-------------------------
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEE-EcC-CCCcEEEEEECCCCCEEEEEeC-------------------------
Confidence 555556677887643211 11110 111 1234778999999987776532
Q ss_pred CCcccCCCCeEEEEeCCC-C---eE-EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 222 PIKITKDTGRVLKYDPTT-K---QT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 222 ~~~~~~~~g~l~~~d~~t-~---~~-~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
++.+..+|... + +. ..+.......+.++++|+++.+..+ ...+.|..++..
T Consensus 128 -------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~i~iW~~~ 183 (330)
T 2hes_X 128 -------DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASS-SYDDTVRIWKDY 183 (330)
T ss_dssp -------TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE-ETTSCEEEEEEE
T ss_pred -------CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECC
Confidence 36688888732 2 12 2222222345688999999866544 445667766654
No 279
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.15 E-value=0.013 Score=61.12 Aligned_cols=138 Identities=9% Similarity=0.043 Sum_probs=80.8
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEE
Q 015463 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIA 148 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Va 148 (406)
.++.+.++|..++.+ +|.|+.++.. +...+.... . .........++.+++ +|+ |.++
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~Sp-dg~~l~~~ 79 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS-T----------------FDEFGHSINDYSISP-DGQFILLE 79 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTT-T----------------TTTCCSCCCEEEECT-TSSEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEech-h----------------hhhhcccccceEECC-CCCEEEEE
Confidence 367888999855554 8999999976 222221110 0 000011223567888 565 4444
Q ss_pred eCC---------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCC
Q 015463 149 DAY---------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLN 218 (406)
Q Consensus 149 d~~---------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (406)
... ..++.+|.++++.+.+.... ......++.+||+ |.++..
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~~----------------------- 131 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKRQLITEERIP-----NNTQWVTWSPVGHKLAYVWN----------------------- 131 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEECCSSCCC-----TTEEEEEECSSTTCEEEEET-----------------------
T ss_pred ECCeeeEEEccceEEEEEECCCCcEEEcccCC-----CcceeeEECCCCCEEEEEEC-----------------------
Confidence 431 24678999998766543211 1345678889985 544421
Q ss_pred CCCCCcccCCCCeEEEEeCCCCeEEEeccc-------------------CCCcceEEEecCCCEEEEEe
Q 015463 219 DPSPIKITKDTGRVLKYDPTTKQTTVLLRN-------------------LQFPNGLSLSKDKSFFVFCE 268 (406)
Q Consensus 219 ~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-------------------~~~~ngi~l~~d~~~l~v~~ 268 (406)
+.|+.+|..+++.+.+... +....++++||||+.|.+..
T Consensus 132 -----------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 132 -----------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp -----------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred -----------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 4577777777765554321 11223588999999877653
No 280
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.14 E-value=0.055 Score=49.26 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=61.5
Q ss_pred cCcceEEEcCC--CCeeEEEecCCEEEEEeCC---ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC--
Q 015463 69 QGPESMAFDPL--GRGPYTGVADGRILFWDGL---KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-- 141 (406)
Q Consensus 69 ~gpe~i~~d~~--g~~ly~g~~~g~I~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-- 141 (406)
....++++.++ ++.+++++.+|.|..|+.. ....+...... ...+- ...........+.+.++
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM-KVLSI---------PPANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE-ESCSC---------CCSSCSCCCEEEEECCCSS
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc-ccccc---------ccCCcccceeEEEeccCCC
Confidence 34578899988 8888999999999999865 11111110000 00000 00111344567888873
Q ss_pred -CCcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC----CEEEEe
Q 015463 142 -TGDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG----NVYFTD 194 (406)
Q Consensus 142 -~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG----~ly~t~ 194 (406)
...+.++...+.+...+...++...+... .+ ....+.++++.++| ++.++.
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PG-HKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEEC-CC-CCSCEEEEEECCCSSCSSEEEEEE
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeec-CC-CCcceeEEEECCCCCCcceEEEEE
Confidence 33455555544555555555544322211 11 12346788899887 555554
No 281
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.13 E-value=0.2 Score=48.10 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=81.2
Q ss_pred EEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcE
Q 015463 75 AFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGL 154 (406)
Q Consensus 75 ~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl 154 (406)
++..+|+.+.+|+.+|.|..|+....+...... ...+....+.++ +..|+++...+.|
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------------------~h~~~v~~l~~~--~~~l~sg~~dg~i 195 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT--------------------GHTGSVLCLQYD--ERVIITGSSDSTV 195 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEEC--------------------CCSSCEEEEECC--SSEEEEEETTSCE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc--------------------CCCCcEEEEEEC--CCEEEEEcCCCeE
Confidence 344567878999999999999876222211111 012335566664 4567777776779
Q ss_pred EEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEE
Q 015463 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLK 234 (406)
Q Consensus 155 ~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~ 234 (406)
..+|.++++........ ...+.+++++ +...++.+ .+|.|..
T Consensus 196 ~vwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~s--------------------------------~dg~i~v 237 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIHH----CEAVLHLRFN--NGMMVTCS--------------------------------KDRSIAV 237 (435)
T ss_dssp EEEESSSCCEEEEECCC----CSCEEEEECC--TTEEEEEE--------------------------------TTSCEEE
T ss_pred EEEECCCCcEEEEEcCC----CCcEEEEEEc--CCEEEEee--------------------------------CCCcEEE
Confidence 99998877643222111 1234555654 33444332 1367888
Q ss_pred EeCCCCeEE---Eeccc-CCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 235 YDPTTKQTT---VLLRN-LQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 235 ~d~~t~~~~---~~~~~-~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
||..+++.. ....+ ......+++ +++.++.+. ..+.|..+++.
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~-~dg~i~vwd~~ 284 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS-GDRTIKVWNTS 284 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE-TTSEEEEEETT
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe-CCCeEEEEECC
Confidence 888766532 11222 122234444 677665554 46788888865
No 282
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.01 E-value=0.14 Score=47.90 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=49.0
Q ss_pred cccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCe-EEEEeCCCCeEEEecc-c--CCCcc
Q 015463 178 FTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGR-VLKYDPTTKQTTVLLR-N--LQFPN 253 (406)
Q Consensus 178 ~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~-l~~~d~~t~~~~~~~~-~--~~~~n 253 (406)
.+.++++.++|++.++.+ .+|. +..+|..+++...... + ....+
T Consensus 197 ~v~~~~~s~~g~~l~s~s--------------------------------~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCS--------------------------------QDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp CEEEEEECTTSSEEEEEE--------------------------------TTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred ceEEEEECCCCCEEEEEe--------------------------------CCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 356777777777666643 2476 8889998876544333 2 23457
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEeeCC
Q 015463 254 GLSLSKDKSFFVFCEGSVGRLHKYWLIGE 282 (406)
Q Consensus 254 gi~l~~d~~~l~v~~t~~~~i~~~~~~g~ 282 (406)
.++++||++.+..+. ..+.|..+++...
T Consensus 245 ~~~~s~~~~~l~s~s-~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVS-DKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTSCEEEEEE-TTCEEEEEESSCC
T ss_pred EEEECCCCCEEEEEE-CCCEEEEEEccCC
Confidence 899999998776554 4578888887643
No 283
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.00 E-value=0.097 Score=47.34 Aligned_cols=215 Identities=11% Similarity=-0.010 Sum_probs=110.7
Q ss_pred CcccCcceEEEcCCCCeeEEEecCCEEEEEeCC--c-eeEEEeecCCC----------------cc--ccCCCCCccccc
Q 015463 66 NQIQGPESMAFDPLGRGPYTGVADGRILFWDGL--K-WTDFAFTSNNR----------------SE--LCNPKPIATSYL 124 (406)
Q Consensus 66 ~~~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~--~-~~~~~~~~~~~----------------~~--~~~~~~~~~~~~ 124 (406)
+.-..-.++++.++|+.+.+|+.+|.|..|+.. + ...+....... .. ............
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA 144 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEE
Confidence 344567789999999999999999999999876 1 11111000000 00 000000000000
Q ss_pred ccCCcCCcceEEEEeCCCCc-EEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCC-CEEEEeCCCchhhh
Q 015463 125 KNEHICGRPLGLRFDKKTGD-LYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRR 202 (406)
Q Consensus 125 ~~~~~~~~p~gi~~d~~~g~-L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~ 202 (406)
...........+.+.+ +++ |..+...+.|..+|..+++...............+..++..+++ ++....+
T Consensus 145 ~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------- 216 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG------- 216 (318)
T ss_dssp EEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE-------
T ss_pred EEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe-------
Confidence 0011123344566666 454 44444445677788765532111000000011223445555543 3332221
Q ss_pred ccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEe-CCCCeEEEEEeeC
Q 015463 203 QMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCE-GSVGRLHKYWLIG 281 (406)
Q Consensus 203 ~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~-t~~~~i~~~~~~g 281 (406)
+...+.+..+|..+...............++++++++.++.+. ...+.|..+++..
T Consensus 217 -----------------------~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 217 -----------------------GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp -----------------------CTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred -----------------------cCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 1224667778887776655544445556788889988877654 3456788888652
Q ss_pred CCCcceeeeecCCCCC---CceEECCCCCEEEEEccCC
Q 015463 282 EKAGNLEAFAILPGYP---DNVRTNEKGEFWVAIHCRR 316 (406)
Q Consensus 282 ~~~~~~~~~~~l~g~p---d~i~~d~~G~lwv~~~~~~ 316 (406)
. +....+.|.. ..++++++|++.++....+
T Consensus 274 ~-----~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 274 M-----AKVAELKGHTSRVLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp C-----CEEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred C-----cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 1 2222233333 3467889998777655443
No 284
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.052 Score=58.12 Aligned_cols=154 Identities=7% Similarity=-0.094 Sum_probs=96.9
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
..++++.+ |+.|.+++.++.|..|+...-+.+.... + .+....++++++...|++++.
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~--------------------~-~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF--------------------V-PGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE--------------------C-SSCEEEEECCTTCSEEEEEET
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc--------------------C-CCCEEEEEECCCCCEEEEEcC
Confidence 46888888 7778889999999999976211111000 0 134678899984455777777
Q ss_pred CCcEEEEeCCCCeEEEccc-------ccCCcccccccceEEcCCC-CEEEEeCCCchhhhccccccccccccccCCCCCC
Q 015463 151 YFGLMKVGPEGGLATSLAT-------EAEGVPLRFTNDLDIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSP 222 (406)
Q Consensus 151 ~~gl~~~d~~~~~~~~l~~-------~~~~~~~~~~~~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (406)
.+.|..+|.++++...+.. .........+.++++.+++ .+.++.+.
T Consensus 119 dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-------------------------- 172 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-------------------------- 172 (902)
T ss_dssp TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS--------------------------
T ss_pred CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC--------------------------
Confidence 7789999998876532211 0001112357889999864 44444322
Q ss_pred CcccCCCCeEEEEeCCCCeEEEecccC-------------------CCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 223 IKITKDTGRVLKYDPTTKQTTVLLRNL-------------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 223 ~~~~~~~g~l~~~d~~t~~~~~~~~~~-------------------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
+|.+ .+|.++++........ ...+.++++||++.+..+ ...+.|..+++.
T Consensus 173 ------dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~ 241 (902)
T 2oaj_A 173 ------YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDAN 241 (902)
T ss_dssp ------SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETT
T ss_pred ------CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECC
Confidence 3667 8998887654332211 235689999999866554 445678777764
No 285
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.93 E-value=0.024 Score=55.27 Aligned_cols=157 Identities=12% Similarity=0.068 Sum_probs=90.9
Q ss_pred cceEEEcCCCCeeE----EEecCCEEEEEeCCce--------eEEEeecCCCccccCCCCCcccccccCCcCCcceEEEE
Q 015463 71 PESMAFDPLGRGPY----TGVADGRILFWDGLKW--------TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRF 138 (406)
Q Consensus 71 pe~i~~d~~g~~ly----~g~~~g~I~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 138 (406)
..+++++++|+.++ ++..++.|..|+.... +.+.... ........+.++++
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~h~~~V~~v~~ 157 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-----------------LLKDAGGMVIDMKW 157 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-----------------CCCSGGGSEEEEEE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-----------------ccCCCCCceEEEEE
Confidence 67899999999777 5667888888875411 0000000 00111345778999
Q ss_pred eCCCCcEE-EEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 139 DKKTGDLY-IADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 139 d~~~g~L~-Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
.+++++++ .+...+.|..+|.+++.... ... + ....+.+++..++|+..++.+.
T Consensus 158 ~p~~~~~las~s~Dg~v~iwD~~~~~~~~-~~~--~-~~~~v~~v~wspdg~~lasgs~--------------------- 212 (434)
T 2oit_A 158 NPTVPSMVAVCLADGSIAVLQVTETVKVC-ATL--P-STVAVTSVCWSPKGKQLAVGKQ--------------------- 212 (434)
T ss_dssp CSSCTTEEEEEETTSCEEEEEESSSEEEE-EEE--C-GGGCEEEEEECTTSSCEEEEET---------------------
T ss_pred CCCCCCEEEEEECCCeEEEEEcCCCccee-ecc--C-CCCceeEEEEcCCCCEEEEEcC---------------------
Confidence 98435654 45556678899988764321 111 1 1235788999999976555322
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecccCC-------CcceEEEecCCCEEEEEeCCC------CeEEEEEee
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQ-------FPNGLSLSKDKSFFVFCEGSV------GRLHKYWLI 280 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~-------~~ngi~l~~d~~~l~v~~t~~------~~i~~~~~~ 280 (406)
+|.|..||.+......+..... ....+++++++.++....+.. ..+..+++.
T Consensus 213 -----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 213 -----------NGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp -----------TSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred -----------CCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 4779999987333333321111 234677777776655544333 236666665
No 286
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.89 E-value=0.33 Score=46.59 Aligned_cols=142 Identities=11% Similarity=-0.009 Sum_probs=84.4
Q ss_pred EcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeCCCcEE
Q 015463 76 FDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADAYFGLM 155 (406)
Q Consensus 76 ~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~~gl~ 155 (406)
+..+|+.+++++.+|.|..|+....+...... ...+....+.++ ++.++.+...+.|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV--------------------GHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECC--------------------CCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEc--------------------CCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 44457879999999999999976222221111 112335677787 45677777777899
Q ss_pred EEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEEEE
Q 015463 156 KVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKY 235 (406)
Q Consensus 156 ~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~ 235 (406)
.+|.++++........ ...+.++..+ ++..++.+ .+|.|..|
T Consensus 183 vwd~~~~~~~~~~~~h----~~~v~~~~~~--~~~l~s~s--------------------------------~dg~i~~w 224 (445)
T 2ovr_B 183 VWNAETGECIHTLYGH----TSTVRCMHLH--EKRVVSGS--------------------------------RDATLRVW 224 (445)
T ss_dssp EEETTTTEEEEEECCC----SSCEEEEEEE--TTEEEEEE--------------------------------TTSEEEEE
T ss_pred EEECCcCcEEEEECCC----CCcEEEEEec--CCEEEEEe--------------------------------CCCEEEEE
Confidence 9999887643222111 1234566664 33333322 24789999
Q ss_pred eCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 236 DPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 236 d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
|..+++......+. .....+++ +++.++.+. ..+.|..+++.
T Consensus 225 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~iwd~~ 267 (445)
T 2ovr_B 225 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA-YDFMVKVWDPE 267 (445)
T ss_dssp ESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE-TTSCEEEEEGG
T ss_pred ECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc-CCCEEEEEECC
Confidence 98877654433322 22334544 677665554 46788888865
No 287
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.85 E-value=0.055 Score=50.08 Aligned_cols=116 Identities=12% Similarity=0.103 Sum_probs=70.9
Q ss_pred cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCC-EEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCe
Q 015463 153 GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGR 231 (406)
Q Consensus 153 gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~ 231 (406)
.|+.++.++++.+.+ ..+..+.+.+||+ |.++.... ......
T Consensus 44 ~l~~~d~~~~~~~~l---------~~~~~~~~SpDg~~la~~~~~~----------------------------~~~~~~ 86 (347)
T 2gop_A 44 TIVIENLKNNARRFI---------ENATMPRISPDGKKIAFMRANE----------------------------EKKVSE 86 (347)
T ss_dssp EEEEEETTTCCEEEE---------ESCEEEEECTTSSEEEEEEEET----------------------------TTTEEE
T ss_pred eEEEEeCCCCceEEc---------ccCCCeEECCCCCEEEEEEecc----------------------------CCCcce
Confidence 466677776665444 2355678999995 55443110 011245
Q ss_pred EEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCC--------------------------CCeEEEEEeeCCCCc
Q 015463 232 VLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGS--------------------------VGRLHKYWLIGEKAG 285 (406)
Q Consensus 232 l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~--------------------------~~~i~~~~~~g~~~~ 285 (406)
|+.+|.++++...+...-. ...++++||++.++++... ..+|+++++.+.
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--- 162 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--- 162 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT---
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC---
Confidence 9999998888776654333 6788999999988877522 256888887542
Q ss_pred ce-eeeecCCCCCCceEECCCCCEEEEE
Q 015463 286 NL-EAFAILPGYPDNVRTNEKGEFWVAI 312 (406)
Q Consensus 286 ~~-~~~~~l~g~pd~i~~d~~G~lwv~~ 312 (406)
.. ..+.. + ....+..+++| +.++.
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred eEEeeecC-C-CcccccCCCCe-EEEEE
Confidence 22 22222 2 34567778888 55444
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.84 E-value=0.3 Score=45.30 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=56.4
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 72 ESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
.+|++++ ++ +|+....|.|++-... .|+...... ...+.+.+|++.. ++++|++.
T Consensus 83 ~~i~~~~-~~-~~~~g~~g~i~~S~DgG~tW~~~~~~~--------------------~~~~~~~~i~~~~-~~~~~~~~ 139 (327)
T 2xbg_A 83 NSVSFQG-NE-GWIVGEPPIMLHTTDGGQSWSQIPLDP--------------------KLPGSPRLIKALG-NGSAEMIT 139 (327)
T ss_dssp EEEEEET-TE-EEEEEETTEEEEESSTTSSCEECCCCT--------------------TCSSCEEEEEEEE-TTEEEEEE
T ss_pred EEEEecC-Ce-EEEEECCCeEEEECCCCCCceECcccc--------------------CCCCCeEEEEEEC-CCCEEEEe
Confidence 4567764 44 7777677878875433 555442110 0113456787766 68899887
Q ss_pred CCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeC
Q 015463 150 AYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDS 195 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~ 195 (406)
...+|++-.-.+...+.+..... ..+.+++++++|.+|+...
T Consensus 140 ~~g~v~~S~DgG~tW~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 181 (327)
T 2xbg_A 140 NVGAIYRTKDSGKNWQALVQEAI----GVMRNLNRSPSGEYVAVSS 181 (327)
T ss_dssp TTCCEEEESSTTSSEEEEECSCC----CCEEEEEECTTSCEEEEET
T ss_pred CCccEEEEcCCCCCCEEeecCCC----cceEEEEEcCCCcEEEEEC
Confidence 66667765433444444332211 2356788888888887653
No 289
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.81 E-value=0.59 Score=48.21 Aligned_cols=40 Identities=20% Similarity=0.271 Sum_probs=25.4
Q ss_pred eEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEec
Q 015463 353 HAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGS 394 (406)
Q Consensus 353 ~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs 394 (406)
.+.+.++|. +|+.+..+.-+.+..... ...+.+|+.|+..
T Consensus 497 dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 497 DGRLVAYHAATGEKLWEAPTGTGVVAAP--STYMVDGRQYVSV 537 (677)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEE
T ss_pred CCcEEEEECCCCceeeeeeCCCCcccCC--EEEEeCCEEEEEE
Confidence 345777885 589999887665532222 2235788888764
No 290
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.78 E-value=0.41 Score=45.97 Aligned_cols=145 Identities=11% Similarity=0.007 Sum_probs=85.0
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
..+++++ ++.++++..+|.|..|+........... ........+.++ ++.++++..
T Consensus 162 v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~--~~~l~s~s~ 217 (445)
T 2ovr_B 162 VWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY--------------------GHTSTVRCMHLH--EKRVVSGSR 217 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEEE--TTEEEEEET
T ss_pred EEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC--------------------CCCCcEEEEEec--CCEEEEEeC
Confidence 3556664 5568999999999999976222221111 012335577776 456788877
Q ss_pred CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCC
Q 015463 151 YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTG 230 (406)
Q Consensus 151 ~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g 230 (406)
.+.|..+|..+++........ ...+..+.. +|+..++.+. +|
T Consensus 218 dg~i~~wd~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~--------------------------------dg 259 (445)
T 2ovr_B 218 DATLRVWDIETGQCLHVLMGH----VAAVRCVQY--DGRRVVSGAY--------------------------------DF 259 (445)
T ss_dssp TSEEEEEESSSCCEEEEEECC----SSCEEEEEE--CSSCEEEEET--------------------------------TS
T ss_pred CCEEEEEECCCCcEEEEEcCC----cccEEEEEE--CCCEEEEEcC--------------------------------CC
Confidence 778999998876543222111 123455666 4544444321 36
Q ss_pred eEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 231 RVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 231 ~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
.+..||..+++......+. .....+++ |++.++.+. ..+.|..+++.
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~i~d~~ 307 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS-LDTSIRVWDVE 307 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE-TTSCEEEEETT
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe-CCCeEEEEECC
Confidence 7889998877654433322 22234444 777766554 45788888875
No 291
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.77 E-value=0.39 Score=49.59 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=32.9
Q ss_pred CeEEEEeCCCC--eEEEecccCCCcceEEEecCCCEEEEEeCC---CCeEEEEEeeCCCC
Q 015463 230 GRVLKYDPTTK--QTTVLLRNLQFPNGLSLSKDKSFFVFCEGS---VGRLHKYWLIGEKA 284 (406)
Q Consensus 230 g~l~~~d~~t~--~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~---~~~i~~~~~~g~~~ 284 (406)
..++.+|.+++ +.+.+.......... ++++++.+|+.... ..+|++++++++..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 46888887665 455554332222222 66778777776543 36899999876433
No 292
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.73 E-value=0.15 Score=53.01 Aligned_cols=116 Identities=15% Similarity=0.121 Sum_probs=65.0
Q ss_pred EEEEeCCCCcEEEEeCCC--------------cEEEEeCCCCeE--EEcccccCCcccccccceEEcCCCC-EEEEeCCC
Q 015463 135 GLRFDKKTGDLYIADAYF--------------GLMKVGPEGGLA--TSLATEAEGVPLRFTNDLDIDDEGN-VYFTDSST 197 (406)
Q Consensus 135 gi~~d~~~g~L~Vad~~~--------------gl~~~d~~~~~~--~~l~~~~~~~~~~~~~~l~~d~dG~-ly~t~~~~ 197 (406)
++++.++ ..|+++.... .|++++..++.. +.+... ... ..+..++.+++||+ |.++....
T Consensus 213 ~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~-~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 213 GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PEL-PKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-TTC-TTCEEEEEECTTSCEEEEEEECT
T ss_pred cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-CCC-CeEEEEEEECCCCCEEEEEEEcc
Confidence 4567774 6666665432 388888766542 111111 111 11345778899995 44443210
Q ss_pred chhhhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCC--e-EEEecccCCCcceEEEecCCCEEEEEeCC---C
Q 015463 198 NYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTK--Q-TTVLLRNLQFPNGLSLSKDKSFFVFCEGS---V 271 (406)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~--~-~~~~~~~~~~~ngi~l~~d~~~l~v~~t~---~ 271 (406)
......|+.+|.+++ + .+.+.......... +++|++.+++.... .
T Consensus 290 ----------------------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 290 ----------------------------TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp ----------------------------TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTT
T ss_pred ----------------------------CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCC
Confidence 011356888888776 5 55554433222233 45888888877542 4
Q ss_pred CeEEEEEeeCC
Q 015463 272 GRLHKYWLIGE 282 (406)
Q Consensus 272 ~~i~~~~~~g~ 282 (406)
.+|++++++++
T Consensus 341 ~~l~~~d~~~~ 351 (741)
T 1yr2_A 341 KKIVRVDLSGS 351 (741)
T ss_dssp CEEEEEECSSS
T ss_pred CEEEEEeCCCC
Confidence 57999998653
No 293
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.70 E-value=0.0038 Score=59.63 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=54.7
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe-C
Q 015463 73 SMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD-A 150 (406)
Q Consensus 73 ~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad-~ 150 (406)
+.+++ ++.+|+++.+|.|+.+|.. .-....... . . ....| +.. ++.++++. .
T Consensus 4 sP~v~--~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~--~----------------~~s~p----~~~-~g~~~v~~s~ 57 (369)
T 2hz6_A 4 TVTLP--ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D--P----------------VLQVP----THV-EEPAFLPDPN 57 (369)
T ss_dssp ----C--TTEEEEEETTSEEEEEETTTCCEEEEEEC-C--C----------------SCCCC----------CCEEECTT
T ss_pred CCeee--CCEEEEEcCCCEEEEEECCCCCEEEEecC-C--C----------------ceecc----eEc-CCCEEEEeCC
Confidence 34453 4459999999999999975 222221111 1 0 01112 112 46666663 4
Q ss_pred CCcEEEEeCCCCeE-EEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCC
Q 015463 151 YFGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDT 229 (406)
Q Consensus 151 ~~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 229 (406)
.+.|+.+|.++|+. ..+...... . .....++..+|.+|++.. +
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~--~-~~~sp~~~~~~~v~~g~~---------------------------------d 101 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPE--L-VQASPCRSSDGILYMGKK---------------------------------Q 101 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHH--H-HTTCSCC-----CCCCEE---------------------------------E
T ss_pred CCEEEEEECCCCceeeeeeccCcc--c-cccCceEecCCEEEEEeC---------------------------------C
Confidence 46799999876653 222111000 0 001112223566776542 2
Q ss_pred CeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
|.|+.+|+++|+....... ......+++++.+|+... .+.|+.++.+
T Consensus 102 g~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~~-dg~v~a~d~~ 148 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGRT-EYTITMYDTK 148 (369)
T ss_dssp EEEEEECCC-------------------------EEEEEE-EEEEECCCSS
T ss_pred CEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEec-CCEEEEEECC
Confidence 6799999998875432211 112345567777777643 4677777765
No 294
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.69 E-value=0.48 Score=45.43 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=84.3
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEeC
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIADA 150 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~ 150 (406)
..++.+ +++.+++|+.+|.|..|+........... ........++++ ++.++.+..
T Consensus 176 v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~l~~~--~~~l~s~s~ 231 (435)
T 1p22_A 176 VLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI--------------------HHCEAVLHLRFN--NGMMVTCSK 231 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC--------------------CCCSCEEEEECC--TTEEEEEET
T ss_pred EEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc--------------------CCCCcEEEEEEc--CCEEEEeeC
Confidence 345555 67779999999999999876211111111 112335667775 457777777
Q ss_pred CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCC
Q 015463 151 YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTG 230 (406)
Q Consensus 151 ~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g 230 (406)
.+.|..+|..++..........+. ...+..+.. +|+..++.+. +|
T Consensus 232 dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~~~--------------------------------dg 276 (435)
T 1p22_A 232 DRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDF--DDKYIVSASG--------------------------------DR 276 (435)
T ss_dssp TSCEEEEECSSSSCCEEEEEECCC-SSCEEEEEE--ETTEEEEEET--------------------------------TS
T ss_pred CCcEEEEeCCCCCCceeeeEecCC-CCcEEEEEe--CCCEEEEEeC--------------------------------CC
Confidence 777889998765422111111111 123455666 4555544321 47
Q ss_pred eEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 231 RVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 231 ~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
.+..||..+++......+. .....+++ +++.++.. ...+.|..+++.
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g-~~dg~i~iwd~~ 324 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSG-SSDNTIRLWDIE 324 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEE-ETTSCEEEEETT
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEE-eCCCeEEEEECC
Confidence 8999999887654433322 22233444 56655554 446788888875
No 295
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.64 E-value=0.12 Score=53.43 Aligned_cols=79 Identities=6% Similarity=0.005 Sum_probs=48.4
Q ss_pred eEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC---------------CeEEEEEeeCCCCcceeeeec--C
Q 015463 231 RVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV---------------GRLHKYWLIGEKAGNLEAFAI--L 293 (406)
Q Consensus 231 ~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~---------------~~i~~~~~~g~~~~~~~~~~~--l 293 (406)
.|+.+|.++++.......-....+++++||++.++++.... ..|+++++.++......++.. -
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE 231 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC
Confidence 69999999988765321112245799999999988876432 248888876433222223322 1
Q ss_pred CCCCCceEECCCCCEE
Q 015463 294 PGYPDNVRTNEKGEFW 309 (406)
Q Consensus 294 ~g~pd~i~~d~~G~lw 309 (406)
+....++.+++||+..
T Consensus 232 ~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYV 247 (710)
T ss_dssp TTCEEEEEECTTSCEE
T ss_pred CeEEEEEEEcCCCCEE
Confidence 2222357788999833
No 296
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.59 E-value=0.14 Score=52.93 Aligned_cols=124 Identities=11% Similarity=0.025 Sum_probs=70.8
Q ss_pred EEEEeCCCCeEEEccccc---CCcccccccceEEcCCCCEE-EEeCCCchhhhccccccccccccccCCCCCCCcccCCC
Q 015463 154 LMKVGPEGGLATSLATEA---EGVPLRFTNDLDIDDEGNVY-FTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDT 229 (406)
Q Consensus 154 l~~~d~~~~~~~~l~~~~---~~~~~~~~~~l~~d~dG~ly-~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 229 (406)
|++.+..++..+.+.... .+. .....++.+.+||+.. ++.+.. +...
T Consensus 96 l~~~~~~~~~~~~l~d~~~~a~~~-~~~~~~~~~SPDG~~la~~~~~~----------------------------G~~~ 146 (695)
T 2bkl_A 96 LYWRQGESGQEKVLLDPNGWSKDG-TVSLGTWAVSWDGKKVAFAQKPN----------------------------AADE 146 (695)
T ss_dssp EEEEESTTSCCEEEECGGGSSSSS-CEEEEEEEECTTSSEEEEEEEET----------------------------TCSC
T ss_pred EEEEcCCCCCcEEEEchHHhccCC-CEEEEEEEECCCCCEEEEEECCC----------------------------CCce
Confidence 688887666655554321 111 1235678899999643 332110 2223
Q ss_pred CeEEEEeCCCCeEEEecccCCCc--ceEEEecCCCEEEEEeCCC------------CeEEEEEeeCCCCcceeeeecCCC
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFP--NGLSLSKDKSFFVFCEGSV------------GRLHKYWLIGEKAGNLEAFAILPG 295 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~--ngi~l~~d~~~l~v~~t~~------------~~i~~~~~~g~~~~~~~~~~~l~g 295 (406)
..|+.+|.++++... ...+... .++++++|++.++++.... ..|+++++.++......++. .++
T Consensus 147 ~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~-~~~ 224 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE-RTG 224 (695)
T ss_dssp CEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC-CCC
T ss_pred EEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe-cCC
Confidence 579999999887530 1122222 5799999999888876532 34888887654322222332 222
Q ss_pred ---CCCceEECCCCCE
Q 015463 296 ---YPDNVRTNEKGEF 308 (406)
Q Consensus 296 ---~pd~i~~d~~G~l 308 (406)
.-.++..++||+.
T Consensus 225 ~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKY 240 (695)
T ss_dssp CTTCEEEEEECTTSCC
T ss_pred CCEEEEEEEECCCCCE
Confidence 2225677888873
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.57 E-value=0.79 Score=46.51 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=28.7
Q ss_pred cceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEecC
Q 015463 351 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 395 (406)
Q Consensus 351 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~ 395 (406)
...+.+.+||. +|+++..+.-+.+..... .+.+.+|++|+...
T Consensus 491 t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P--~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLLWKFKIPSGAIGYP--MTYTHKGTQYVAIY 534 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEeeCCCCcEecc--EEEEeCCEEEEEEE
Confidence 44556888885 499999987665543222 22368999998764
No 298
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.51 E-value=0.46 Score=49.13 Aligned_cols=43 Identities=14% Similarity=0.260 Sum_probs=28.2
Q ss_pred cceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEecC
Q 015463 351 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 395 (406)
Q Consensus 351 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~ 395 (406)
...+.+.++|. +|+++..+..+.+.....+ ..+.+|+.|+...
T Consensus 493 t~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 493 SADGRVIAYAADTGEKLWEQPAASGVMAAPV--TYSVDGEQYVTFM 536 (689)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred CCCCcEEEEECCCCccceeeeCCCCcccCce--EEEECCEEEEEEE
Confidence 44556888885 4999998876655432222 2368899998754
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.49 E-value=0.53 Score=43.62 Aligned_cols=183 Identities=13% Similarity=0.176 Sum_probs=94.3
Q ss_pred cceEEEcCCCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 71 PESMAFDPLGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 71 pe~i~~d~~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
..+|++.+++. +|+....|.|++-... .|+...... ........+|.+++ +++|++
T Consensus 38 ~~~v~~~~~~~-~~~~G~~g~i~~s~DgG~tW~~~~~~~-------------------~~~~~~~~~i~~~~--~~~~~~ 95 (327)
T 2xbg_A 38 ILDMSFIDRHH-GWLVGVNATLMETRDGGQTWEPRTLVL-------------------DHSDYRFNSVSFQG--NEGWIV 95 (327)
T ss_dssp EEEEEESSSSC-EEEEETTTEEEEESSTTSSCEECCCCC-------------------SCCCCEEEEEEEET--TEEEEE
T ss_pred EEEEEECCCCc-EEEEcCCCeEEEeCCCCCCCeECCCCC-------------------CCCCccEEEEEecC--CeEEEE
Confidence 45666666666 6665567878776443 565542110 00011245788874 678887
Q ss_pred eCCCcEEEEeCCCCe-EEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DAYFGLMKVGPEGGL-ATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~~~gl~~~d~~~~~-~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
....+|++ ..++|+ .+.+.... ..+ ..+..+++.+++.+|+....
T Consensus 96 g~~g~i~~-S~DgG~tW~~~~~~~-~~~-~~~~~i~~~~~~~~~~~~~~------------------------------- 141 (327)
T 2xbg_A 96 GEPPIMLH-TTDGGQSWSQIPLDP-KLP-GSPRLIKALGNGSAEMITNV------------------------------- 141 (327)
T ss_dssp EETTEEEE-ESSTTSSCEECCCCT-TCS-SCEEEEEEEETTEEEEEETT-------------------------------
T ss_pred ECCCeEEE-ECCCCCCceECcccc-CCC-CCeEEEEEECCCCEEEEeCC-------------------------------
Confidence 65555666 455443 33332110 001 12456777667888877532
Q ss_pred CCCeEEEEeCCCCeEEEecccC-CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec-CCCCCCceEECCC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNL-QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRTNEK 305 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~-~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~-l~g~pd~i~~d~~ 305 (406)
|.|++-.-.....+...... ....++++++++..+ ++.. .+.+++-+-.+. ...+.... .+.....++++++
T Consensus 142 --g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~~g~-~G~~~~S~d~gG--~tW~~~~~~~~~~~~~~~~~~~ 215 (327)
T 2xbg_A 142 --GAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYV-AVSS-RGSFYSTWEPGQ--TAWEPHNRTTSRRLHNMGFTPD 215 (327)
T ss_dssp --CCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEE-EEET-TSSEEEEECTTC--SSCEEEECCSSSCEEEEEECTT
T ss_pred --ccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEE-EEEC-CCcEEEEeCCCC--CceeECCCCCCCccceeEECCC
Confidence 45666543333444443222 123467788877644 3333 456776542211 11111111 1112235667888
Q ss_pred CCEEEEEccC
Q 015463 306 GEFWVAIHCR 315 (406)
Q Consensus 306 G~lwv~~~~~ 315 (406)
|++|++...+
T Consensus 216 g~~~~~~~~G 225 (327)
T 2xbg_A 216 GRLWMIVNGG 225 (327)
T ss_dssp SCEEEEETTT
T ss_pred CCEEEEeCCc
Confidence 9999887654
No 300
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.48 E-value=0.46 Score=48.90 Aligned_cols=152 Identities=12% Similarity=0.021 Sum_probs=82.2
Q ss_pred ceEEEcCCCCeeEEEecCCE-------------EEEEeCC-ce---eEEEeecCCCccccCCCCCcccccccCCcCCcce
Q 015463 72 ESMAFDPLGRGPYTGVADGR-------------ILFWDGL-KW---TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL 134 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~-------------I~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 134 (406)
.++++.+||+.++.+..+.. |++++.. .. +.+.... .......
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~--------------------~~~~~~~ 230 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT--------------------GDPTTFL 230 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC--------------------CCTTCEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC--------------------CCCEEEE
Confidence 57899999987777666543 8888765 11 1111100 0012245
Q ss_pred EEEEeCCCCc-EEEEeCCC----cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 135 GLRFDKKTGD-LYIADAYF----GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 135 gi~~d~~~g~-L~Vad~~~----gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
++.+++ +|+ |.++.... .|+.++..+++.+.+...... ...... ++|.+|+.+..
T Consensus 231 ~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~-----~~~~~~-~~g~l~~~s~~------------- 290 (695)
T 2bkl_A 231 QSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA-----KYEVHA-WKDRFYVLTDE------------- 290 (695)
T ss_dssp EEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC-----CEEEEE-ETTEEEEEECT-------------
T ss_pred EEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc-----eEEEEe-cCCcEEEEECC-------------
Confidence 778888 554 55444333 588887766666655433221 112222 44557777531
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCe---EEEecccC--CCcceEEEecCCCEEEEEeCC--CCeEEEEEeeC
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQ---TTVLLRNL--QFPNGLSLSKDKSFFVFCEGS--VGRLHKYWLIG 281 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~--~~~ngi~l~~d~~~l~v~~t~--~~~i~~~~~~g 281 (406)
..+.++|+.+|.++++ .+.+.... ....+++++ ++ .++++... ..+|+.++++|
T Consensus 291 ----------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 291 ----------------GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp ----------------TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTC
T ss_pred ----------------CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCC
Confidence 2235789999988765 24443221 223566776 34 45555432 34677776543
No 301
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.11 Score=49.73 Aligned_cols=150 Identities=8% Similarity=-0.009 Sum_probs=87.4
Q ss_pred EcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCc-EEEEeCCCcE
Q 015463 76 FDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGD-LYIADAYFGL 154 (406)
Q Consensus 76 ~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~-L~Vad~~~gl 154 (406)
+.++++.+++++.+|.|..|+....+.+..... ....+....+++++ +++ |..+...+.|
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------------------~~h~~~v~~~~~s~-~~~~l~s~~~dg~i 238 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN------------------SPRHGAVSSICIDE-ECCVLILGTTRGII 238 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC------------------CGGGCCEEEEEECT-TSCEEEEEETTSCE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc------------------CCCCCceEEEEECC-CCCEEEEEcCCCeE
Confidence 345688899999999999999762111111100 00124467899998 555 5556655669
Q ss_pred EEEeCCCCeEEEcccccCCcccccccceEE----cCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCC
Q 015463 155 MKVGPEGGLATSLATEAEGVPLRFTNDLDI----DDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTG 230 (406)
Q Consensus 155 ~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~----d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g 230 (406)
..+|..+++....... .. ...+..++. .++|.+.++.+. +|
T Consensus 239 ~iwd~~~~~~~~~~~~-~~--~~~v~~~~~~~~~s~~~~~l~s~~~--------------------------------dg 283 (437)
T 3gre_A 239 DIWDIRFNVLIRSWSF-GD--HAPITHVEVCQFYGKNSVIVVGGSS--------------------------------KT 283 (437)
T ss_dssp EEEETTTTEEEEEEBC-TT--CEEEEEEEECTTTCTTEEEEEEEST--------------------------------TE
T ss_pred EEEEcCCccEEEEEec-CC--CCceEEEEeccccCCCccEEEEEcC--------------------------------CC
Confidence 9999887754321111 11 113556643 345656655432 46
Q ss_pred eEEEEeCCCCeEEEecccC---------------------------CCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 231 RVLKYDPTTKQTTVLLRNL---------------------------QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 231 ~l~~~d~~t~~~~~~~~~~---------------------------~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.|..||..+++......+. .....++++ +++ ++++....+.|..+++..
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTC
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCC
Confidence 7888888877644322110 112457787 664 445556667888888763
No 302
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.20 E-value=0.25 Score=51.45 Aligned_cols=77 Identities=10% Similarity=0.047 Sum_probs=44.9
Q ss_pred CeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCC-------------CeEEEEEeeCCCCcceeeeecCCCC
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSV-------------GRLHKYWLIGEKAGNLEAFAILPGY 296 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~-------------~~i~~~~~~g~~~~~~~~~~~l~g~ 296 (406)
..|+.+|.++++.......-....++++++| +.++++.... .+|+++++.++......++. .++.
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA-TPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC-CTTC
T ss_pred EEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec-cCCC
Confidence 3599999999876443111111247889999 8888876432 25888887543222222332 2222
Q ss_pred ---CCceEECCCCCE
Q 015463 297 ---PDNVRTNEKGEF 308 (406)
Q Consensus 297 ---pd~i~~d~~G~l 308 (406)
-.++..++||+.
T Consensus 267 ~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 267 PKRGHGASVSSDGRW 281 (741)
T ss_dssp TTCEEEEEECTTSCE
T ss_pred CeEEEEEEECCCCCE
Confidence 235667889973
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.19 E-value=0.054 Score=47.53 Aligned_cols=105 Identities=15% Similarity=0.017 Sum_probs=65.2
Q ss_pred ceEEEEeCCCCcEEEEeCCCcEEEEeCCCCeEEEcccc---cCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 133 PLGLRFDKKTGDLYIADAYFGLMKVGPEGGLATSLATE---AEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 133 p~gi~~d~~~g~L~Vad~~~gl~~~d~~~~~~~~l~~~---~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
...|+|++ +|.||.. ....|+++++.++.-..+... ....-.+....+.+|++|.||..+
T Consensus 43 ~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~--------------- 105 (236)
T 1tl2_A 43 FKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS--------------- 105 (236)
T ss_dssp CSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE---------------
T ss_pred ceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC---------------
Confidence 45799999 9999999 456799999866322222111 000012235678999999999984
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCeE-------EEec-ccCCCcceEEEecCCCEEEEEeCCCCeEEE
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT-------TVLL-RNLQFPNGLSLSKDKSFFVFCEGSVGRLHK 276 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~-------~~~~-~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~ 276 (406)
+|.|++.++-+..- ..+. .+-..-.-|.++|||. ||.+. .+++++
T Consensus 106 -------------------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr 158 (236)
T 1tl2_A 106 -------------------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYK 158 (236)
T ss_dssp -------------------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEE
T ss_pred -------------------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEe
Confidence 27899999844211 1111 1112235678888885 66665 456766
No 304
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.12 E-value=1.5 Score=45.03 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=31.4
Q ss_pred EEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 354 AMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 354 ~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
+.+.++|. +|+++..+...... ....+...+|.||+|+. ...+..+|.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~---~~~~~~t~gg~vf~g~~-dg~l~a~d~ 486 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHW---NGGTLSTAGNLVFQGTA-AGQMHAYSA 486 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC---CCCEEEETTTEEEEECT-TSEEEEEET
T ss_pred ceEEEEeCCCCcEEEEccCCCCC---cCceeEeCCCEEEEECC-cccchhhhh
Confidence 67889996 58887776532211 12334456889999975 667777764
No 305
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.10 E-value=1.4 Score=44.61 Aligned_cols=50 Identities=10% Similarity=0.030 Sum_probs=31.7
Q ss_pred ceEEEEEECCC-CCEEEEEECCCCCeeeceeEEEEeCCEEEEecCCCCeEEEEeC
Q 015463 352 LHAMAVKYSPE-GKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 405 (406)
Q Consensus 352 ~~~~v~~~d~~-g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~~~~~i~~~~~ 405 (406)
..+.+.++|.. |+++...... ... ....+...+|.+|+|+. ...|..+|.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~--~~~-~~g~~~tagg~vf~gt~-dg~l~A~D~ 501 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER--FAV-WGGTMATAGDLVFYGTL-DGYLKARDS 501 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES--SCC-CSBCEEETTTEEEEECT-TSEEEEEET
T ss_pred CcCeEEEEECCCCCEEeEecCC--CCc-cCcceEecCCEEEEECC-CCeEEEEEC
Confidence 34678899964 8888776432 111 11224457889999986 566776764
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.08 E-value=0.68 Score=46.81 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=28.9
Q ss_pred cceEEEEEECC-CCCEEEEEECCCCCeeeceeEEEEeCCEEEEecC
Q 015463 351 RLHAMAVKYSP-EGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSV 395 (406)
Q Consensus 351 ~~~~~v~~~d~-~g~~~~~~~~~~g~~~~~~s~~~~~~g~Ly~Gs~ 395 (406)
...+.+.+||. +|+++..+..+.+..... .+.+.+|++|++..
T Consensus 504 ~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P--~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 504 TGDGYFKAFDAKSGKELWKFQTGSGIVSPP--ITWEQDGEQYLGVT 547 (582)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCcEEEEECCCCCEEEEecCCCCcccCc--eEEEECCEEEEEEE
Confidence 44456888885 599999988766532211 22358999999854
No 307
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.087 Score=52.71 Aligned_cols=194 Identities=9% Similarity=-0.056 Sum_probs=108.0
Q ss_pred cceEEEcCC------CCeeEEEecCCEEEEEeCC-ce-e--EEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC
Q 015463 71 PESMAFDPL------GRGPYTGVADGRILFWDGL-KW-T--DFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK 140 (406)
Q Consensus 71 pe~i~~d~~------g~~ly~g~~~g~I~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~ 140 (406)
..++++.++ ++.|.+++.||.|..|+.. .. . ...... . + ........+...++++.+
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~-~-p-----------~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE-K-P-----------SLTLSLADSLITTFDFLS 276 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC-S-C-----------SEEECCTTTCEEEEEESS
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec-C-c-----------eEEEEcCCCCEEEEEecC
Confidence 467888875 5667889999999999865 10 0 000000 0 0 000111124456888887
Q ss_pred CCCcEEEEeCCCcEEEEeCCCCeE--EEcccccCCcccccccce--EEcCCC-CEEEEeCCCchhhhccccccccccccc
Q 015463 141 KTGDLYIADAYFGLMKVGPEGGLA--TSLATEAEGVPLRFTNDL--DIDDEG-NVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 141 ~~g~L~Vad~~~gl~~~d~~~~~~--~~l~~~~~~~~~~~~~~l--~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.|..+...+.|..+|.+++.. ..+... ...++++ +..++| ++.++.+.
T Consensus 277 -~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H-----~~~V~sv~~~~s~~g~~~laS~S~------------------- 331 (524)
T 2j04_B 277 -PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH-----DSYILSVSTAYSDFEDTVVSTVAV------------------- 331 (524)
T ss_dssp -SSEEEEEETTSEEEEEETTBCSSCSEEEECS-----SSCEEEEEEECCTTSCCEEEEEET-------------------
T ss_pred -CCeEEEEeCCCEEEEEECCCCCCceEEeecc-----cccEEEEEEEcCCCCCeEEEEecc-------------------
Confidence 67777787777789999876531 111110 1246677 346677 77776543
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEE-EecccC--CCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeeec
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTT-VLLRNL--QFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAI 292 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~-~~~~~~--~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~~ 292 (406)
++.+..+|..+++.. .+.... .....++++||++.+ ++....+.|..+++..... ...+..
T Consensus 332 -------------D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l-~s~~~d~tv~lwd~~~~~~--~~~l~g 395 (524)
T 2j04_B 332 -------------DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY-IYSDGASSLRAVPSRAAFA--VHPLVS 395 (524)
T ss_dssp -------------TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE-EEECSSSEEEEEETTCTTC--CEEEEE
T ss_pred -------------CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE-EEeCCCCcEEEEECccccc--ceeeec
Confidence 477888887665421 111111 124579999999865 4444556777777653211 111221
Q ss_pred CCCCCCceEECCCCCEEEEEccCCcc
Q 015463 293 LPGYPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 293 l~g~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
-.+....++++++|.+.++......+
T Consensus 396 H~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 396 RETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp CSSCEEEEECCSSCCBCEEEETTTEE
T ss_pred CCCceEEEEeCCCCCeEEEEECCCEE
Confidence 12223456778888866665444443
No 308
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.04 E-value=0.84 Score=47.03 Aligned_cols=82 Identities=18% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCC--CCCceEECCC
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG--YPDNVRTNEK 305 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g--~pd~i~~d~~ 305 (406)
.|.|..+|+.|++..--...-...++..++.++..+|+. +..+.++.++.+. ++. +.. .++. ...-+....+
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~t---G~~-lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAAT---GEK-LWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CCE-EEEEECSSCCCSCCEEEEET
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCC---Cce-eeeeeCCCCcccCCEEEEeC
Confidence 378999999999764332222223455677778778776 5678999998653 221 111 2221 1122444468
Q ss_pred CCEEEEEccC
Q 015463 306 GEFWVAIHCR 315 (406)
Q Consensus 306 G~lwv~~~~~ 315 (406)
|+.|++...+
T Consensus 531 G~~~v~~~~G 540 (677)
T 1kb0_A 531 GRQYVSVAVG 540 (677)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEecc
Confidence 8999887555
No 309
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.00 E-value=0.072 Score=53.87 Aligned_cols=123 Identities=21% Similarity=0.393 Sum_probs=74.4
Q ss_pred cCcccCcceEEEcC-CCCeeEEEec----------------------CCEEEEEeCC---------ceeEEEeecCCCcc
Q 015463 65 LNQIQGPESMAFDP-LGRGPYTGVA----------------------DGRILFWDGL---------KWTDFAFTSNNRSE 112 (406)
Q Consensus 65 ~~~~~gpe~i~~d~-~g~~ly~g~~----------------------~g~I~~~~~~---------~~~~~~~~~~~~~~ 112 (406)
...+..||.+.+++ +|. +|+.+. .|.|+++..+ .|..+.........
T Consensus 380 AT~f~RpEgi~~~p~~g~-vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~ 458 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVH 458 (592)
T ss_dssp CCCEECEEEEEECTTTCC-EEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTS
T ss_pred eEEEeccceeEEcCCCCE-EEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccc
Confidence 34678999999996 566 666533 2789999743 22333322110000
Q ss_pred ccCCCCCc-ccccccCCcCCcceEEEEeCCCCcEEEEeCC-------------CcEEEEeCCCCeEEEcccccCCccccc
Q 015463 113 LCNPKPIA-TSYLKNEHICGRPLGLRFDKKTGDLYIADAY-------------FGLMKVGPEGGLATSLATEAEGVPLRF 178 (406)
Q Consensus 113 ~~~~~~~~-~~~~~~~~~~~~p~gi~~d~~~g~L~Vad~~-------------~gl~~~d~~~~~~~~l~~~~~~~~~~~ 178 (406)
...... ............|-+|+|++ .|+|||++.. +.++.+++.++++..+.....+. .
T Consensus 459 --~~~~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ga---E 532 (592)
T 3zwu_A 459 --AGTPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC---E 532 (592)
T ss_dssp --TTSGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTC---E
T ss_pred --cccccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCc---c
Confidence 000000 00000112346689999999 8999999764 24788899989888876543333 4
Q ss_pred ccceEEcCCC-CEEEEe
Q 015463 179 TNDLDIDDEG-NVYFTD 194 (406)
Q Consensus 179 ~~~l~~d~dG-~ly~t~ 194 (406)
+.++++.+|| .||+.-
T Consensus 533 ~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 533 VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred CcCeeECCCCCEEEEEE
Confidence 5678999998 566664
No 310
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.92 E-value=0.68 Score=47.71 Aligned_cols=110 Identities=14% Similarity=0.178 Sum_probs=62.3
Q ss_pred eEEEEeCCCCc-EEEEeCC----CcEEEEeCCCC--eEEEcccccCCcccccccceEEcC-CCCEEEEeCCCchhhhccc
Q 015463 134 LGLRFDKKTGD-LYIADAY----FGLMKVGPEGG--LATSLATEAEGVPLRFTNDLDIDD-EGNVYFTDSSTNYQRRQMQ 205 (406)
Q Consensus 134 ~gi~~d~~~g~-L~Vad~~----~gl~~~d~~~~--~~~~l~~~~~~~~~~~~~~l~~d~-dG~ly~t~~~~~~~~~~~~ 205 (406)
.++.+++ +|+ |++.... ..|+.+|.+++ ..+.+...... .... +++ ++.+||.+..
T Consensus 237 ~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-----~~~~-~~~~g~~l~~~t~~--------- 300 (693)
T 3iuj_A 237 VGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-----DVSL-VDNKGSTLYLLTNR--------- 300 (693)
T ss_dssp EEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-----CEEE-EEEETTEEEEEECT---------
T ss_pred EEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-----eEEE-EeccCCEEEEEECC---------
Confidence 4677888 565 4444321 36888887655 44444322111 1111 333 4578877632
Q ss_pred cccccccccccCCCCCCCcccCCCCeEEEEeCCCCeE---EEecccCCCcceEEEecCCCEEEEEeCCC--CeEEEEEee
Q 015463 206 KENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQT---TVLLRNLQFPNGLSLSKDKSFFVFCEGSV--GRLHKYWLI 280 (406)
Q Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~---~~~~~~~~~~ngi~l~~d~~~l~v~~t~~--~~i~~~~~~ 280 (406)
....++|+.+|.+++.. +.+...-... +.++++++.++++.... .+|++++++
T Consensus 301 --------------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 301 --------------------DAPNRRLVTVDAANPGPAHWRDLIPERQQV--LTVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp --------------------TCTTCEEEEEETTSCCGGGCEEEECCCSSC--EEEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred --------------------CCCCCEEEEEeCCCCCccccEEEecCCCCE--EEEEEECCEEEEEEEECCeeEEEEEECC
Confidence 22347899999987653 4444322222 27888898887775433 367777766
Q ss_pred C
Q 015463 281 G 281 (406)
Q Consensus 281 g 281 (406)
|
T Consensus 359 g 359 (693)
T 3iuj_A 359 G 359 (693)
T ss_dssp S
T ss_pred C
Confidence 4
No 311
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.88 E-value=0.97 Score=42.50 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=33.7
Q ss_pred CCeEEEEeCCCCeEEEecccCC-Ccc-eEEEecCCCEEEEEeCCCCeEEEEEe
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQ-FPN-GLSLSKDKSFFVFCEGSVGRLHKYWL 279 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~-~~n-gi~l~~d~~~l~v~~t~~~~i~~~~~ 279 (406)
++.+..+|..+++......+.. ... .++++||++.|+ +....+.|+.++.
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 4779999999998655444332 233 489999998764 4455667776653
No 312
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.85 E-value=0.94 Score=42.85 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=46.0
Q ss_pred cceEEEcC--------CCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC
Q 015463 71 PESMAFDP--------LGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK 141 (406)
Q Consensus 71 pe~i~~d~--------~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~ 141 (406)
-.++++.+ +|++|.+++.|+.|..||.. .-....... ....+..++|.++
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~---------------------~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP---------------------LSSPGISVQFRPS 197 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE---------------------CSSCEEEEEEETT
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC---------------------CCCCcEEEEECCC
Confidence 46777765 78878889999999999854 211111110 0233568899984
Q ss_pred CCc-EEEEeCCCcEEEEeCCCCe
Q 015463 142 TGD-LYIADAYFGLMKVGPEGGL 163 (406)
Q Consensus 142 ~g~-L~Vad~~~gl~~~d~~~~~ 163 (406)
+.+ |..+...+.|..+|..+++
T Consensus 198 ~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 198 NPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEETTSEEEEEETTCCC
T ss_pred CCceEEecCCCCEEEEEECCCCc
Confidence 334 5555555668888987764
No 313
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.84 E-value=0.07 Score=53.39 Aligned_cols=154 Identities=8% Similarity=-0.048 Sum_probs=91.9
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEE--EEeCCCC-cE
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGL--RFDKKTG-DL 145 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi--~~d~~~g-~L 145 (406)
...++++.+++ .|.+|+.||.|..|+.. ........ ....+...++ ++.+ +| ++
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~--------------------~~H~~~V~sv~~~~s~-~g~~~ 325 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYD--------------------QVHDSYILSVSTAYSD-FEDTV 325 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEE--------------------ECSSSCEEEEEEECCT-TSCCE
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEe--------------------ecccccEEEEEEEcCC-CCCeE
Confidence 34678887665 59999999999999975 21110000 0012335566 4555 55 55
Q ss_pred EEE-eCCCcEEEEeCCCCeEE-EcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCC
Q 015463 146 YIA-DAYFGLMKVGPEGGLAT-SLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPI 223 (406)
Q Consensus 146 ~Va-d~~~gl~~~d~~~~~~~-~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 223 (406)
+++ ...+.+..+|..+++.. .+..... ...+..+++.++|..+++.+.
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~~~~---~~~v~~v~fsp~~~~l~s~~~--------------------------- 375 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVSRFR---GSNLVPVVYCPQIYSYIYSDG--------------------------- 375 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEEECS---CCSCCCEEEETTTTEEEEECS---------------------------
T ss_pred EEEeccCCeEEEEECCCCCcccccccccc---cCcccceEeCCCcCeEEEeCC---------------------------
Confidence 444 44456888887654321 1111111 113567899999988777543
Q ss_pred cccCCCCeEEEEeCCCCeE-EEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 224 KITKDTGRVLKYDPTTKQT-TVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 224 ~~~~~~g~l~~~d~~t~~~-~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
++.+..+|..++.. ..+.......+.|+++||++.+. +....+.|..+++.+
T Consensus 376 -----d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~-Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 376 -----ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL-AGSADGSLIITNAAR 428 (524)
T ss_dssp -----SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE-EEETTTEEECCBSCS
T ss_pred -----CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE-EEECCCEEEEEechH
Confidence 35677888877653 33333333457899999998764 444567787777653
No 314
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.69 E-value=0.96 Score=46.69 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=48.0
Q ss_pred CeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCC--CCCceEECCCC
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG--YPDNVRTNEKG 306 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g--~pd~i~~d~~G 306 (406)
|.|..+|++||+..--.......++-.++..+..+|+. +..+.|+.++.+. |+ +++. .++. ...-+....+|
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~t---G~-~lw~~~~~~~~~~~p~ty~~~G 529 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADT---GE-KLWEQPAASGVMAAPVTYSVDG 529 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEEETT
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCC---Cc-cceeeeCCCCcccCceEEEECC
Confidence 78999999999764332221122333566667667665 5678899998653 32 2221 2221 11225545789
Q ss_pred CEEEEEccC
Q 015463 307 EFWVAIHCR 315 (406)
Q Consensus 307 ~lwv~~~~~ 315 (406)
+.||+...+
T Consensus 530 ~qyv~~~~G 538 (689)
T 1yiq_A 530 EQYVTFMAG 538 (689)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999997654
No 315
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.37 E-value=1.4 Score=39.32 Aligned_cols=51 Identities=6% Similarity=-0.033 Sum_probs=24.8
Q ss_pred CCeEEEEeCCCCeEE-----EecccCCCcceEEEecCCCEEEEE-e-CCCCeEEEEEe
Q 015463 229 TGRVLKYDPTTKQTT-----VLLRNLQFPNGLSLSKDKSFFVFC-E-GSVGRLHKYWL 279 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~-----~~~~~~~~~ngi~l~~d~~~l~v~-~-t~~~~i~~~~~ 279 (406)
+|.+..+|..+++.. ...........++.++++..++.. . ...+.|..++.
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 467888887765421 111111223456677765544433 2 22344555554
No 316
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.27 E-value=2.6 Score=43.26 Aligned_cols=82 Identities=21% Similarity=0.288 Sum_probs=47.4
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCC-C-CCCceEECCC
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILP-G-YPDNVRTNEK 305 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~-g-~pd~i~~d~~ 305 (406)
.|.|+.+|+.|++..--........+..+...+..+|+. +..+.|+.++.+. ++ .++. .++ + ...-+....+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~t---G~-~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADK---GE-ALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhc---Ch-hheEecCCCCcccCceEEEEC
Confidence 378999999999864322222223444555567777776 5678899988652 22 1111 121 1 1122333457
Q ss_pred CCEEEEEccC
Q 015463 306 GEFWVAIHCR 315 (406)
Q Consensus 306 G~lwv~~~~~ 315 (406)
|++|++...+
T Consensus 512 G~~yva~~~G 521 (668)
T 1kv9_A 512 GRQYVAIMAG 521 (668)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 8999987654
No 317
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.03 E-value=2.1 Score=41.26 Aligned_cols=105 Identities=10% Similarity=-0.088 Sum_probs=63.8
Q ss_pred cCcceEEEcCC-CCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 69 QGPESMAFDPL-GRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 69 ~gpe~i~~d~~-g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
....++++.++ ++.+.+++.+|.|..||........... .....+..+++++++..|++
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~--------------------~~~~~v~~v~wspdg~~las 209 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL--------------------PSTVAVTSVCWSPKGKQLAV 209 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE--------------------CGGGCEEEEEECTTSSCEEE
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc--------------------CCCCceeEEEEcCCCCEEEE
Confidence 45678999987 7777789999999999876212111110 01234678999984445777
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccC--CcccccccceEEcCCCCEEEE
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAE--GVPLRFTNDLDIDDEGNVYFT 193 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~--~~~~~~~~~l~~d~dG~ly~t 193 (406)
+...+.|..+|.++.....+..... ......+.++..++++.+.++
T Consensus 210 gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 210 GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 7776779999988443333321111 000124567777777655544
No 318
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.93 E-value=2.3 Score=39.37 Aligned_cols=181 Identities=10% Similarity=0.014 Sum_probs=91.1
Q ss_pred cCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEE
Q 015463 69 QGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIA 148 (406)
Q Consensus 69 ~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Va 148 (406)
....+++++++|+.+.+|+.+ ++..|+.+......... ......+.+....+.+.++
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQE----------------------MRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEE----------------------CSCCCEEEECTTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeee----------------------cCCeEEEEEcCCCCEEEEE
Confidence 355789999999966666655 57777755222211110 0012234455523334343
Q ss_pred eC-CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 149 DA-YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 149 d~-~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
.. .+.|..+|..+++...... .. ..+.++.+++++ +.++.
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~-~~----~~v~~v~~~~~~-~~~~~--------------------------------- 117 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIK-VD----APVKDLFLSREF-IVVSY--------------------------------- 117 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEE-CS----SCEEEEEECSSE-EEEEE---------------------------------
T ss_pred ECCccEEEEEECCCCcEEEEEE-CC----CceEEEEEcCCE-EEEEE---------------------------------
Confidence 33 3578889988776433211 11 135566776654 33332
Q ss_pred CCCeEEEEeCCCC-eEEEecccCCCcce-EEEecCCCEEEEE-eCCCCeEEEEEeeCCCCc-----c-----eee-eecC
Q 015463 228 DTGRVLKYDPTTK-QTTVLLRNLQFPNG-LSLSKDKSFFVFC-EGSVGRLHKYWLIGEKAG-----N-----LEA-FAIL 293 (406)
Q Consensus 228 ~~g~l~~~d~~t~-~~~~~~~~~~~~ng-i~l~~d~~~l~v~-~t~~~~i~~~~~~g~~~~-----~-----~~~-~~~l 293 (406)
.+.+..||..++ +....... +.+ +++++ +.+.++ ....+.|..+++...+.- . ... ...+
T Consensus 118 -~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (355)
T 3vu4_A 118 -GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI 191 (355)
T ss_dssp -TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE
T ss_pred -cCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE
Confidence 156888887765 21111111 333 44655 455554 455677888887642100 0 000 1112
Q ss_pred CCC---CCceEECCCCCEEEEEccCCc
Q 015463 294 PGY---PDNVRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 294 ~g~---pd~i~~d~~G~lwv~~~~~~~ 317 (406)
.+. ...++++++|++.++......
T Consensus 192 ~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 192 KAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred EccCCceEEEEECCCCCEEEEEeCCCC
Confidence 222 345678899987777655443
No 319
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.37 E-value=1.7 Score=41.03 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=35.8
Q ss_pred CCCeEEEEeCCCCeEEEe-cccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC
Q 015463 228 DTGRVLKYDPTTKQTTVL-LRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG 281 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~-~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g 281 (406)
.+|.|..+|..+++.... ...-.....++++|||+.|.++. .+++..+.+.|
T Consensus 337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 358899999887754332 22223457899999999887664 46777777654
No 320
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.10 E-value=5.5 Score=40.08 Aligned_cols=83 Identities=11% Similarity=0.106 Sum_probs=46.3
Q ss_pred CCCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcceeeee-cCCC--CCCceEECC
Q 015463 228 DTGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPG--YPDNVRTNE 304 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~~~~~~-~l~g--~pd~i~~d~ 304 (406)
..|.|+.+|+.||+..--........+-.+...+..+|+. +..+.|+.++.+. |+ ++.. .+++ ...-+....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~t---G~-~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKS---GK-ELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTT---CC-EEEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCC---CC-EEEEecCCCCcccCceEEEE
Confidence 3588999999998764222111112222233345566665 5568898888652 22 1221 2221 112255557
Q ss_pred CCCEEEEEccC
Q 015463 305 KGEFWVAIHCR 315 (406)
Q Consensus 305 ~G~lwv~~~~~ 315 (406)
+|+.||+...+
T Consensus 539 ~G~qYv~~~~G 549 (582)
T 1flg_A 539 DGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999998765
No 321
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.94 E-value=7.6 Score=39.47 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=41.6
Q ss_pred EEEcCCCCeeEEEe-cCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCc-ceEEEEeCCCCcEEEEe
Q 015463 74 MAFDPLGRGPYTGV-ADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGR-PLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 74 i~~d~~g~~ly~g~-~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~d~~~g~L~Vad 149 (406)
.++..+|.++.+|. .+..+.++|.. .|+...... ..| -.+.++-+ +|.|||.-
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~----------------------~~R~~~s~~~~~-dg~iyv~G 304 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ----------------------VARGYQSSATMS-DGRVFTIG 304 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS----------------------SCCSSCEEEECT-TSCEEEEC
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC----------------------ccccccceEEec-CCeEEEEe
Confidence 45556777444554 23468888865 565542111 111 13445554 68888875
Q ss_pred CC-------CcEEEEeCCCCeEEEc
Q 015463 150 AY-------FGLMKVGPEGGLATSL 167 (406)
Q Consensus 150 ~~-------~gl~~~d~~~~~~~~l 167 (406)
.. ..+.++|+++++.+.+
T Consensus 305 G~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CcccCCcccccceEeCCCCCcceeC
Confidence 41 3489999998877665
No 322
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=92.52 E-value=4.8 Score=41.83 Aligned_cols=76 Identities=5% Similarity=0.031 Sum_probs=43.9
Q ss_pred CeEEEEeCCCC-eEEEecccCC-CcceEEEecCCCEEEEEeCCC----CeEEEEEeeCCCCcceeeeec-CCCCCCceEE
Q 015463 230 GRVLKYDPTTK-QTTVLLRNLQ-FPNGLSLSKDKSFFVFCEGSV----GRLHKYWLIGEKAGNLEAFAI-LPGYPDNVRT 302 (406)
Q Consensus 230 g~l~~~d~~t~-~~~~~~~~~~-~~ngi~l~~d~~~l~v~~t~~----~~i~~~~~~g~~~~~~~~~~~-l~g~pd~i~~ 302 (406)
..|+.+|.+++ +. +...+. ...++++++|++.++++.... ..|+++++.++......++.. ...+--++..
T Consensus 201 ~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 278 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYK 278 (751)
T ss_dssp EEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEE
T ss_pred EEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEE
Confidence 35999999887 52 111111 124688999998887765421 368888876543322334432 1122234567
Q ss_pred CCCCC
Q 015463 303 NEKGE 307 (406)
Q Consensus 303 d~~G~ 307 (406)
++||+
T Consensus 279 SpDg~ 283 (751)
T 2xe4_A 279 AADTN 283 (751)
T ss_dssp CTTSS
T ss_pred CCCCC
Confidence 88887
No 323
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.31 E-value=0.087 Score=49.99 Aligned_cols=49 Identities=10% Similarity=0.001 Sum_probs=24.8
Q ss_pred CeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEee
Q 015463 230 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 230 g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~ 280 (406)
|.|+.+|.++|+..--... .......+..++. +|++.+..+.|+.++.+
T Consensus 19 g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 7899999988876432222 1222222334453 55555556788888864
No 324
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=91.80 E-value=6.1 Score=37.55 Aligned_cols=134 Identities=10% Similarity=0.063 Sum_probs=81.9
Q ss_pred ccCcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 68 IQGPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 68 ~~gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
+..+..+++ +|+.|+++ .++.|..|+......-.... .+ ......+..-+ .++.+
T Consensus 87 lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~-----~~---------------~~~v~~i~~~~--p~~av 141 (388)
T 1xip_A 87 IPDVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVT-----SF---------------EKPVFQLKNVN--NTLVI 141 (388)
T ss_dssp CTTEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEE-----EC---------------SSCEEEEEECS--SEEEE
T ss_pred CCCeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccc-----ee---------------ecceeeEEecC--CCEEE
Confidence 445788899 77878998 78899999865111100000 00 01123444433 35777
Q ss_pred EeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccC
Q 015463 148 ADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITK 227 (406)
Q Consensus 148 ad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 227 (406)
++..+.|+.+|.+++....+ ...+.+++..++| +.++..
T Consensus 142 ~~~dG~L~v~dl~~~~~~~~--------~~~Vs~v~WSpkG-~~vg~~-------------------------------- 180 (388)
T 1xip_A 142 LNSVNDLSALDLRTKSTKQL--------AQNVTSFDVTNSQ-LAVLLK-------------------------------- 180 (388)
T ss_dssp EETTSEEEEEETTTCCEEEE--------EESEEEEEECSSE-EEEEET--------------------------------
T ss_pred EECCCCEEEEEccCCccccc--------cCCceEEEEcCCc-eEEEEc--------------------------------
Confidence 77777888998886655432 1247789999999 555542
Q ss_pred CCCeEEEEeCCCCeE---EEe------cc---cCCCcceEEEecCCCEEEEEe
Q 015463 228 DTGRVLKYDPTTKQT---TVL------LR---NLQFPNGLSLSKDKSFFVFCE 268 (406)
Q Consensus 228 ~~g~l~~~d~~t~~~---~~~------~~---~~~~~ngi~l~~d~~~l~v~~ 268 (406)
+|.+..|++++++. ..+ .+ .-.....|++.+++.++.+..
T Consensus 181 -dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 -DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp -TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred -CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 36788888887774 233 11 123345788888887765543
No 325
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=90.03 E-value=20 Score=37.25 Aligned_cols=114 Identities=12% Similarity=0.149 Sum_probs=59.3
Q ss_pred CcceEEEcCCC-CeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-CCcE
Q 015463 70 GPESMAFDPLG-RGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDL 145 (406)
Q Consensus 70 gpe~i~~d~~g-~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-~g~L 145 (406)
...+|++++.+ +.+|+++..|+|+|-+.. .|+.+...... ... + ...........|++|+. .+.+
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~--~~~-~--------~~~~~~~~~~~ia~dp~~~~~~ 90 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIIN--NAL-A--------GNGANLLGTESIALDPHNPDRL 90 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBT--TCS-S--------SCCCCCCSEEEEECCTTCTTCE
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccc--ccc-C--------CCcccccceeEEEECCCCCCEE
Confidence 34678888754 569999988999998765 66665321000 000 0 00000122467888872 3679
Q ss_pred EEEeC-------CCcEEEEeCCCCeEEEcccccC--Cc-cc-ccccceEEcC--CCCEEEEe
Q 015463 146 YIADA-------YFGLMKVGPEGGLATSLATEAE--GV-PL-RFTNDLDIDD--EGNVYFTD 194 (406)
Q Consensus 146 ~Vad~-------~~gl~~~d~~~~~~~~l~~~~~--~~-~~-~~~~~l~~d~--dG~ly~t~ 194 (406)
|++.. ..+|++=+-.+...+.+..... +. +. .....|++++ .+.+|++.
T Consensus 91 ~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 91 YLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp EEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred EEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 99764 2456654433333333321110 00 00 0123578875 36788875
No 326
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=89.15 E-value=23 Score=36.86 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=58.1
Q ss_pred cceEEEcCC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCC-CCcEE
Q 015463 71 PESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKK-TGDLY 146 (406)
Q Consensus 71 pe~i~~d~~-g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~-~g~L~ 146 (406)
..+|++++. .+.+|+++..|+|+|-+.. .|+.+.... . ...........|++++. .+.+|
T Consensus 17 i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~-~---------------~~~~~~~~i~~ia~dp~~~~~i~ 80 (789)
T 1sqj_A 17 ITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFI-E---------------AQDMNIMGTESIALDPNNPDRLY 80 (789)
T ss_dssp EEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTC-C---------------GGGGGGCSEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCC-C---------------cccccCCceeEEEECCCCCCEEE
Confidence 456778764 3459999999999999765 676542110 0 00000123567888872 25789
Q ss_pred EEeCC------CcEEEEeCCCCeEEEcccccC--C-ccc-ccccceEEcCC--CCEEEEe
Q 015463 147 IADAY------FGLMKVGPEGGLATSLATEAE--G-VPL-RFTNDLDIDDE--GNVYFTD 194 (406)
Q Consensus 147 Vad~~------~gl~~~d~~~~~~~~l~~~~~--~-~~~-~~~~~l~~d~d--G~ly~t~ 194 (406)
++... .+|++=+-.+...+.+..... + .+. ..+..+++++. +.+|++.
T Consensus 81 ~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 81 LAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 98643 456655433333443322111 0 000 12346788763 4677765
No 327
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=87.45 E-value=29 Score=35.84 Aligned_cols=108 Identities=17% Similarity=0.193 Sum_probs=59.5
Q ss_pred cceEEEcCC-CCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC-CCCcEE
Q 015463 71 PESMAFDPL-GRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDLY 146 (406)
Q Consensus 71 pe~i~~d~~-g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~-~~g~L~ 146 (406)
..+|++++. .+.+|+++..|+|+|.+.. .|+.+..... ...........|++|+ +.+.+|
T Consensus 25 i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~----------------~~~~~~~~i~~i~~dp~~~~~v~ 88 (737)
T 2cn3_A 25 MPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQ----------------MDEYSYYGVESIATDPVDPNRVY 88 (737)
T ss_dssp CCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCC----------------GGGGGGGCEEEEEECSSSTTCEE
T ss_pred eeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccC----------------cccccCCCcceEEeCCCCCCEEE
Confidence 457888865 2459999988899999765 6766422100 0000012245788987 246899
Q ss_pred EEeCC---------CcEEEEeCCCCeEEEcccccC-Cc--cc-ccccceEEcCC--CCEEEEe
Q 015463 147 IADAY---------FGLMKVGPEGGLATSLATEAE-GV--PL-RFTNDLDIDDE--GNVYFTD 194 (406)
Q Consensus 147 Vad~~---------~gl~~~d~~~~~~~~l~~~~~-~~--~~-~~~~~l~~d~d--G~ly~t~ 194 (406)
++... .+|++=.-.+...+.+..... +. +. .....|++++. +.+|+++
T Consensus 89 v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 89 IVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 98741 356665433333333321111 00 00 12357888864 5788876
No 328
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=85.89 E-value=16 Score=34.58 Aligned_cols=153 Identities=10% Similarity=0.013 Sum_probs=81.3
Q ss_pred CcceEEEcCCCCeeEEEecCCEEEEEeCCceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeCCCCcEEEEe
Q 015463 70 GPESMAFDPLGRGPYTGVADGRILFWDGLKWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDKKTGDLYIAD 149 (406)
Q Consensus 70 gpe~i~~d~~g~~ly~g~~~g~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~~~g~L~Vad 149 (406)
....+++.+..++++++..++ +..++.+........... .++.. ......+ +..|+|| +..|+|+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~---~~~~~-------~~~~lp~-V~~l~fd--~~~L~v~- 103 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST---PLTFK-------WEKEIPD-VIFVCFH--GDQVLVS- 103 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC---CCCCS-------EEEECTT-EEEEEEE--TTEEEEE-
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc---cccce-------EEeeCCC-eeEEEEC--CCEEEEE-
Confidence 346778888888777887765 555764411100000000 00000 0001123 7788883 6789999
Q ss_pred CCCcEEEEeCCCCeE-EEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCC
Q 015463 150 AYFGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKD 228 (406)
Q Consensus 150 ~~~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (406)
...+|..||..+-.. .... ... . .++++..-+. ++.+.+.
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~-~~~-~---~v~~i~~~~p-~~av~~~--------------------------------- 144 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVT-SFE-K---PVFQLKNVNN-TLVILNS--------------------------------- 144 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEE-ECS-S---CEEEEEECSS-EEEEEET---------------------------------
T ss_pred cCCcEEEEEchhhhccCccc-eee-c---ceeeEEecCC-CEEEEEC---------------------------------
Confidence 557899998654321 1110 000 1 1223222211 2333332
Q ss_pred CCeEEEEeCCCCeEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCC
Q 015463 229 TGRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGE 282 (406)
Q Consensus 229 ~g~l~~~d~~t~~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~ 282 (406)
+|.|+.+|.++++...+. .....++++++| +.+. ...+.+..|..++.
T Consensus 145 dG~L~v~dl~~~~~~~~~---~~Vs~v~WSpkG--~~vg-~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 145 VNDLSALDLRTKSTKQLA---QNVTSFDVTNSQ--LAVL-LKDRSFQSFAWRNG 192 (388)
T ss_dssp TSEEEEEETTTCCEEEEE---ESEEEEEECSSE--EEEE-ETTSCEEEEEEETT
T ss_pred CCCEEEEEccCCcccccc---CCceEEEEcCCc--eEEE-EcCCcEEEEcCCCc
Confidence 478999998877765543 345689999999 3333 33577788877653
No 329
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=84.94 E-value=19 Score=37.38 Aligned_cols=158 Identities=13% Similarity=0.033 Sum_probs=78.4
Q ss_pred eEEEcC-CCCeeEEEecCCEEEEEeCC--ceeEEEeecCCCccccCCCCCcccccccCCcCCcceEEEEeC-CCCcEEEE
Q 015463 73 SMAFDP-LGRGPYTGVADGRILFWDGL--KWTDFAFTSNNRSELCNPKPIATSYLKNEHICGRPLGLRFDK-KTGDLYIA 148 (406)
Q Consensus 73 ~i~~d~-~g~~ly~g~~~g~I~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~d~-~~g~L~Va 148 (406)
.|++++ +.+.+|+++ +|.|++-... .|+.+....+. + .....-|.+.+ +++.||++
T Consensus 592 ~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~----~---------------~~~~~~i~~~~~~~~~l~~~ 651 (763)
T 3a0f_A 592 GIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPC----C---------------WTYTGTPVTSNLRAGELWVS 651 (763)
T ss_dssp CEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCC----S---------------SCCCEEEEECSSSTTCEEEE
T ss_pred eEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCc----c---------------cCccccEEECCCCCCcEEEE
Confidence 677775 344588884 6778776433 56655211100 0 00011155554 36789999
Q ss_pred eCCCcEEEEeCCCCeEEEcccccCCccc-ccccceEE-cC-CCCEEEEe-CCCchhhhccccccccccccccCCCCCCCc
Q 015463 149 DAYFGLMKVGPEGGLATSLATEAEGVPL-RFTNDLDI-DD-EGNVYFTD-SSTNYQRRQMQKENIPLQLCSSLNDPSPIK 224 (406)
Q Consensus 149 d~~~gl~~~d~~~~~~~~l~~~~~~~~~-~~~~~l~~-d~-dG~ly~t~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (406)
...++|++-+-.+...+.+......... ..-..+++ +. ...||+.. ..
T Consensus 652 ~~~~~l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~---------------------------- 703 (763)
T 3a0f_A 652 VKGVGIYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIPS---------------------------- 703 (763)
T ss_dssp ETTTEEEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEECS----------------------------
T ss_pred cCCCeEEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCceEEEEEEcc----------------------------
Confidence 8777888876544555554321111100 00001122 22 34677753 10
Q ss_pred ccCCCCeEEEEeCCCCeEEEecc---cCCCcceEEEecCC-CEEEEEeCCCCeEEEEEee
Q 015463 225 ITKDTGRVLKYDPTTKQTTVLLR---NLQFPNGLSLSKDK-SFFVFCEGSVGRLHKYWLI 280 (406)
Q Consensus 225 ~~~~~g~l~~~d~~t~~~~~~~~---~~~~~ngi~l~~d~-~~l~v~~t~~~~i~~~~~~ 280 (406)
....++||+-+-.....+.+.. ++.....|+..+.. ..||++ |....|+.-++.
T Consensus 704 -~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~-T~GrGi~~g~~~ 761 (763)
T 3a0f_A 704 -ASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVISGDPRIYGRVYIG-MNGRGIICAQAL 761 (763)
T ss_dssp -TTSCSEEEEESSTTSCCEECSCTTCCTBCEEEEEECTTSTTEEEEE-EBSSCEEEEESC
T ss_pred -cCCCcEEEEeCCCCCCcEeccCccccCCCcceEEeCCCCCCEEEEe-CCCCeEEEEecC
Confidence 1113567776655445555542 22222346666643 357665 445667776654
No 330
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=84.93 E-value=8.7 Score=39.02 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=68.1
Q ss_pred ceEEEEeCCCCcEEEEeCC------------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchh
Q 015463 133 PLGLRFDKKTGDLYIADAY------------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQ 200 (406)
Q Consensus 133 p~gi~~d~~~g~L~Vad~~------------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~ 200 (406)
+...++.+.+|.|||.-.. .-+.++|+.+++.+.+..... ....+..+.++..+|.||+.-..
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~~g~lyv~GG~---- 262 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDGNGQIVVTGGN---- 262 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECTTSCEEEECSS----
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCCCCCEEEeCCC----
Confidence 4566666436788886321 137889999887655432211 11223445677789999998531
Q ss_pred hhccccccccccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCC---cceEEEecCCCEEEEEeC-CC-----
Q 015463 201 RRQMQKENIPLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQF---PNGLSLSKDKSFFVFCEG-SV----- 271 (406)
Q Consensus 201 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~---~ngi~l~~d~~~l~v~~t-~~----- 271 (406)
....+++||+.+++.+.+. .+.. ..+.++.+|++ +|+..- ..
T Consensus 263 ---------------------------~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 263 ---------------------------DAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGR-VFTIGGSWSGGVFE 313 (656)
T ss_dssp ---------------------------STTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSC-EEEECCCCCSSSCC
T ss_pred ---------------------------CCCceEEecCcCCceeECC-CCCccccccceEEecCCe-EEEEeCcccCCccc
Confidence 1236999999998877653 2222 23455666776 445432 11
Q ss_pred CeEEEEEee
Q 015463 272 GRLHKYWLI 280 (406)
Q Consensus 272 ~~i~~~~~~ 280 (406)
..+++|++.
T Consensus 314 ~~~e~yd~~ 322 (656)
T 1k3i_A 314 KNGEVYSPS 322 (656)
T ss_dssp CCEEEEETT
T ss_pred ccceEeCCC
Confidence 458888865
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.38 E-value=24 Score=31.37 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=43.4
Q ss_pred CCcEEEEeC----------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccc
Q 015463 142 TGDLYIADA----------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPL 211 (406)
Q Consensus 142 ~g~L~Vad~----------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 211 (406)
++.|||... ...++++|+++.+.+.+...... ..-..+++. ++.||+.-....
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~-~~~i~v~GG~~~------------- 211 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA---RKNHGLVFV-KDKIFAVGGQNG------------- 211 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC---CBSCEEEEE-TTEEEEECCEET-------------
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch---hhcceEEEE-CCEEEEEeCCCC-------------
Confidence 578888643 23488999999887765422111 111222333 678888642100
Q ss_pred cccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec
Q 015463 212 QLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL 246 (406)
Q Consensus 212 ~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 246 (406)
......+++||+++++.+.+.
T Consensus 212 --------------~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 212 --------------LGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp --------------TEEBCCEEEEETTTTEEEECC
T ss_pred --------------CCCCceEEEeeCCCCcEEECC
Confidence 001245999999998887663
No 332
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=82.22 E-value=32 Score=35.51 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=44.9
Q ss_pred CcceEEEEeCCC-CcEEEEeCCCcEEEEeCCCCeEEEcccccCCc--ccccccceEEcC--CCCEEEEeC
Q 015463 131 GRPLGLRFDKKT-GDLYIADAYFGLMKVGPEGGLATSLATEAEGV--PLRFTNDLDIDD--EGNVYFTDS 195 (406)
Q Consensus 131 ~~p~gi~~d~~~-g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~--~~~~~~~l~~d~--dG~ly~t~~ 195 (406)
++..+|++++.+ +.+|++....||++-+-.+...+.+....... ....+..|++|+ .+.+|++..
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~ 92 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAG 92 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEEC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEec
Confidence 478899998733 68999887789999987776666654321111 123467899997 358999864
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=81.04 E-value=5.2 Score=37.29 Aligned_cols=17 Identities=12% Similarity=-0.064 Sum_probs=15.4
Q ss_pred eeEEEecCCEEEEEeCC
Q 015463 82 GPYTGVADGRILFWDGL 98 (406)
Q Consensus 82 ~ly~g~~~g~I~~~~~~ 98 (406)
.+|+++.+|.|+-+|.+
T Consensus 12 ~V~v~t~dG~l~Ald~~ 28 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRR 28 (339)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCeEEEEECC
Confidence 49999999999999976
No 334
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=79.56 E-value=40 Score=31.43 Aligned_cols=155 Identities=10% Similarity=-0.011 Sum_probs=76.8
Q ss_pred eEEEEeCCCCcEEEEeCC-CcEEEEeCCCCeE-EEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccc
Q 015463 134 LGLRFDKKTGDLYIADAY-FGLMKVGPEGGLA-TSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPL 211 (406)
Q Consensus 134 ~gi~~d~~~g~L~Vad~~-~gl~~~d~~~~~~-~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 211 (406)
+.+++-..++.++++.+. +.|..+|.++++. +.+.. .......+..+++.++|.+.++.+.... .
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g--~~~~v~~v~~vafSpdG~~lvs~s~~~~-----------~ 250 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI--DDSYQASVCHKAYSEMGLLFIVLSHPCA-----------K 250 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC---CCCEEEEEEETTEEEEEEC----------------
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC--CCcceeeeEEEEECCCCCEEEEeccCCC-----------c
Confidence 344442225677776444 6688899998864 33321 1111235666788999987766432100 1
Q ss_pred cccccCCCCCCCcccCCCCeEEEEeCCCCeEEEec-----ccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeCCCCcc
Q 015463 212 QLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL-----RNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGN 286 (406)
Q Consensus 212 ~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-----~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g~~~~~ 286 (406)
.++.. +..++.+..+|+++++..... ++. ...-+..+.++. +.++....+.|..+++... +
T Consensus 251 w~laS---------Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh-~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tG---k 316 (356)
T 2w18_A 251 ESESL---------RSPVFQLIVINPKTTLSVGVMLYCLPPGQ-AGRFLEGDVKDH-CAAAILTSGTIAIWDLLLG---Q 316 (356)
T ss_dssp ----------------CCEEEEEEETTTTEEEEEEEECCCTTC-CCCEEEEEEETT-EEEEEETTSCEEEEETTTC---S
T ss_pred ceeec---------cCCCcEEEEEECCCCEEEEEEEeeccCCC-cceeEccccCCC-EEEEEcCCCcEEEEECCCC---c
Confidence 11222 445667888899988654321 111 001111112232 3445444567777876532 1
Q ss_pred eeeeecCCCC---CC-ceEECCCCCEEEEEccCCc
Q 015463 287 LEAFAILPGY---PD-NVRTNEKGEFWVAIHCRRS 317 (406)
Q Consensus 287 ~~~~~~l~g~---pd-~i~~d~~G~lwv~~~~~~~ 317 (406)
....+.|. +- .+++.++|.+.++....+.
T Consensus 317 --~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 317 --CTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp --EEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred --EEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 11122222 22 3678999997776654433
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.48 E-value=34 Score=30.56 Aligned_cols=74 Identities=15% Similarity=0.088 Sum_probs=43.5
Q ss_pred CCcEEEEeCC-------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccc
Q 015463 142 TGDLYIADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 142 ~g~L~Vad~~-------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
++.|||.-.. +.++++|+.+.+.+.+...... ..-...++ -++.||+......
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~~---------------- 207 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA---RSLFGATV-HDGRIIVAAGVTD---------------- 207 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC---CBSCEEEE-ETTEEEEEEEECS----------------
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc---hhceEEEE-ECCEEEEEeccCC----------------
Confidence 5788887432 3589999999887765432111 11112222 2678888642100
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEec
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL 246 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 246 (406)
......+++||+++++.+.+.
T Consensus 208 -----------~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 208 -----------TGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp -----------SSEEEEEEEEETTTTEEEEEC
T ss_pred -----------CCccceEEEEECCCCeEEECC
Confidence 001236999999999887764
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.37 E-value=3.8 Score=40.92 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=59.3
Q ss_pred eEEEEeCCC----C-eEEEecccCCCcceEEEecCCCEEEEEeCCCCeEEEEEeeC------CCC-c-ceeeeecC-CC-
Q 015463 231 RVLKYDPTT----K-QTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIG------EKA-G-NLEAFAIL-PG- 295 (406)
Q Consensus 231 ~l~~~d~~t----~-~~~~~~~~~~~~ngi~l~~d~~~l~v~~t~~~~i~~~~~~g------~~~-~-~~~~~~~l-~g- 295 (406)
++-.+|... + ....+..--..|+|+.++|||++++++.-....+.+|+.+. .+. . +..+..+. .|
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 477788765 2 34445555578999999999999999988888999998762 111 0 11122221 12
Q ss_pred CCCceEECCCCCEEEEEccCCcc
Q 015463 296 YPDNVRTNEKGEFWVAIHCRRSL 318 (406)
Q Consensus 296 ~pd~i~~d~~G~lwv~~~~~~~~ 318 (406)
-|--.++|.+|+.|.++.-...+
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEE
T ss_pred cccEEEECCCCceEeeeeecceE
Confidence 26678899999999998755444
No 337
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=77.05 E-value=37 Score=35.37 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=44.0
Q ss_pred CCcceEEEEeCC-CCcEEEEeCCCcEEEEeCCCCeEEEcccccCCc--ccccccceEEcCC--CCEEEEe
Q 015463 130 CGRPLGLRFDKK-TGDLYIADAYFGLMKVGPEGGLATSLATEAEGV--PLRFTNDLDIDDE--GNVYFTD 194 (406)
Q Consensus 130 ~~~p~gi~~d~~-~g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~--~~~~~~~l~~d~d--G~ly~t~ 194 (406)
.++..+|++++. .+.+|++....+|++-+-.+...+.+....... ....+.+|++|+. +.+|++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 467889999873 367999988789999886666666543321100 1235678889874 5788876
No 338
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=73.08 E-value=49 Score=29.14 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=43.7
Q ss_pred CCcEEEEeC------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADA------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.|||... ...++++|+++++.+.+...... ..-..+++ -++.||+......
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~i~v~GG~~~----------------- 217 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK---RSGAGVAL-LNDHIYVVGGFDG----------------- 217 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEE-ETTEEEEECCBCS-----------------
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc---cccceEEE-ECCEEEEEeCCCC-----------------
Confidence 578888742 24589999999887765322111 11112222 2678888642100
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEec
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLL 246 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 246 (406)
......+++||+++++.+.+.
T Consensus 218 ----------~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 218 ----------TAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp ----------SSBCCCEEEEETTTTEEEEEC
T ss_pred ----------CcccceEEEEeCCCCcEEECC
Confidence 001246999999999887764
No 339
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=70.98 E-value=55 Score=28.84 Aligned_cols=74 Identities=18% Similarity=0.110 Sum_probs=43.7
Q ss_pred CCcEEEEeC--------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccc
Q 015463 142 TGDLYIADA--------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQL 213 (406)
Q Consensus 142 ~g~L~Vad~--------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~ 213 (406)
++.|||... ...++++|+++++.+.+...... ..-..+++. ++.||+......
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~-~~~iyv~GG~~~--------------- 215 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR---RSGAGVGVL-NNLLYAVGGHDG--------------- 215 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC---CBSCEEEEE-TTEEEEECCBSS---------------
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc---cccccEEEE-CCEEEEECCCCC---------------
Confidence 578888632 23589999998887765422111 111122332 678888742100
Q ss_pred cccCCCCCCCcccCCCCeEEEEeCCCCeEEEec
Q 015463 214 CSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL 246 (406)
Q Consensus 214 ~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 246 (406)
......+++||+++++.+.+.
T Consensus 216 ------------~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 216 ------------PLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp ------------SSBCCCEEEEETTTTEEEEEC
T ss_pred ------------CcccceEEEEeCCCCCEeeCC
Confidence 011246999999999887764
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=67.50 E-value=68 Score=28.55 Aligned_cols=74 Identities=19% Similarity=0.215 Sum_probs=42.9
Q ss_pred CCcEEEEeC-------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccc
Q 015463 142 TGDLYIADA-------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 142 ~g~L~Vad~-------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
++.|||.-. .+.++++|+++.+.+.+...... ..-...++ -++.||+......
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~~---------------- 217 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP---RSMFGVAI-HKGKIVIAGGVTE---------------- 217 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEE-ETTEEEEEEEEET----------------
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC---cccceEEE-ECCEEEEEcCcCC----------------
Confidence 678888642 13489999999887765422111 11112233 3678888642100
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEec
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLL 246 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 246 (406)
......+++||+++++.+.+.
T Consensus 218 -----------~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 218 -----------DGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp -----------TEEEEEEEEEETTTCCEEECC
T ss_pred -----------CCccceEEEEECCCCeEEECC
Confidence 000145899999998887764
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=66.58 E-value=70 Score=28.35 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=57.3
Q ss_pred CCcEEEEeCC----------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccc
Q 015463 142 TGDLYIADAY----------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPL 211 (406)
Q Consensus 142 ~g~L~Vad~~----------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 211 (406)
++.|||.-.. +.++++|+.+.+.+.+...... ... ..+++ -+|.||+.-....
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~-~~~~~-~~~~iyv~GG~~~------------- 132 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP--RNR-IGVGV-IDGHIYAVGGSHG------------- 132 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC--CBT-CEEEE-ETTEEEEECCEET-------------
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC--ccc-cEEEE-ECCEEEEEcCCCC-------------
Confidence 5778876322 3589999998887766432111 111 12222 2678888642100
Q ss_pred cccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC-----CCeEEEEEee
Q 015463 212 QLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-----VGRLHKYWLI 280 (406)
Q Consensus 212 ~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~-----~~~i~~~~~~ 280 (406)
......+++||+.+++.+.+.. +..+ ...+.. + +.+|+..-. ...+++|++.
T Consensus 133 --------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~ 192 (308)
T 1zgk_A 133 --------------CIHHNSVERYEPERDEWHLVAP-MLTRRIGVGVAVL-N-RLLYAVGGFDGTNRLNSAECYYPE 192 (308)
T ss_dssp --------------TEECCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCCEEEEETT
T ss_pred --------------CcccccEEEECCCCCeEeECCC-CCccccceEEEEE-C-CEEEEEeCCCCCCcCceEEEEeCC
Confidence 0012459999999988877642 2221 233333 3 356665321 2458888864
No 342
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=64.99 E-value=75 Score=28.13 Aligned_cols=105 Identities=12% Similarity=0.153 Sum_probs=58.2
Q ss_pred CCcEEEEeC------CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADA------YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~------~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.|||.-. ...++++|+.+.+.+.+...... ..-...++. ++.||+--....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~-~~~iyv~GG~~~----------------- 179 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR---RIGVGVAVL-NRLLYAVGGFDG----------------- 179 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEE-TTEEEEECCBCS-----------------
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc---ccceEEEEE-CCEEEEEeCCCC-----------------
Confidence 578888732 13589999999887766432111 111222333 678888642100
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC-----CCeEEEEEee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-----VGRLHKYWLI 280 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~-----~~~i~~~~~~ 280 (406)
......+++||+.+++.+.+.. +..+ ..++.. ++ .+|+..-. ...+++|++.
T Consensus 180 ----------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 180 ----------TNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp ----------SCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETT
T ss_pred ----------CCcCceEEEEeCCCCeEeeCCC-CCCccccceEEEE-CC-EEEEEeCCCCCCccceEEEEeCC
Confidence 0012469999999988876542 2222 233333 33 46665421 2468888865
No 343
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=61.43 E-value=1.5e+02 Score=30.38 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=26.1
Q ss_pred CCeEEEEeCCC-CeEEE-ecccCC--CcceEEEecCCCEEEEEeCCC--CeEEEEEe
Q 015463 229 TGRVLKYDPTT-KQTTV-LLRNLQ--FPNGLSLSKDKSFFVFCEGSV--GRLHKYWL 279 (406)
Q Consensus 229 ~g~l~~~d~~t-~~~~~-~~~~~~--~~ngi~l~~d~~~l~v~~t~~--~~i~~~~~ 279 (406)
..+|++++.++ ++.+. +...-. ...++ +.+++.++++.... .+|+++++
T Consensus 344 ~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~--~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 344 NHKLLIAPRGQPSDWSHVLVDHSEDVFMESI--AVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TCEEEEEETTSTTCCCCEEECCCSSEEEEEE--EECSSEEEEEEEETTEEEEEEEEC
T ss_pred CcEEEEEcCCCcccceeeEECCCCCcEEEEE--EEECCEEEEEEEeCCEEEEEEEec
Confidence 45799999875 34333 322111 11233 34566777765533 36777775
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=60.86 E-value=1.5e+02 Score=30.16 Aligned_cols=59 Identities=8% Similarity=0.028 Sum_probs=33.2
Q ss_pred EEEEeCCCCcEEEEeCCC---cEEEEeCCCCeEEEcccccCCc-ccccccceEEcCC-CCEEEEe
Q 015463 135 GLRFDKKTGDLYIADAYF---GLMKVGPEGGLATSLATEAEGV-PLRFTNDLDIDDE-GNVYFTD 194 (406)
Q Consensus 135 gi~~d~~~g~L~Vad~~~---gl~~~d~~~~~~~~l~~~~~~~-~~~~~~~l~~d~d-G~ly~t~ 194 (406)
+.+.-. ++.|||.-... .++++|+.+.+.+.+....... +......++++.+ |.||+-.
T Consensus 494 ~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 494 SACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG 557 (695)
T ss_dssp EEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC
T ss_pred eEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC
Confidence 344423 67888874322 5899999998877664311111 1112222444554 7899875
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=57.77 E-value=1.1e+02 Score=27.62 Aligned_cols=51 Identities=20% Similarity=0.217 Sum_probs=29.5
Q ss_pred CCcEEEEeCC-----------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeC
Q 015463 142 TGDLYIADAY-----------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDS 195 (406)
Q Consensus 142 ~g~L~Vad~~-----------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~ 195 (406)
++.|||.-.. +-++++|+.+.+.+.+.... .....-...++ -+|.||+--.
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~-~~~~iyv~GG 126 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFV-HNGKAYVTGG 126 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEE-ETTEEEEEEC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEE-ECCEEEEEeC
Confidence 5788875321 34899999998877665332 01111122333 5778888653
No 346
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=56.91 E-value=1e+02 Score=27.06 Aligned_cols=106 Identities=14% Similarity=0.050 Sum_probs=57.7
Q ss_pred CCcEEEEeC-----CCcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccccc
Q 015463 142 TGDLYIADA-----YFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSS 216 (406)
Q Consensus 142 ~g~L~Vad~-----~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e 216 (406)
++.|||.-. .+.++++|+.+++.+.+...... . .-...++ -++.||+...... .
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r-~~~~~~~-~~~~iyv~GG~~~-~---------------- 113 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP--R-DSLAACA-AEGKIYTSGGSEV-G---------------- 113 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC--C-BSCEEEE-ETTEEEEECCBBT-T----------------
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc--c-cceeEEE-ECCEEEEECCCCC-C----------------
Confidence 577887643 24689999999887665432111 1 1112222 2678888642100 0
Q ss_pred CCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC---------CCeEEEEEee
Q 015463 217 LNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS---------VGRLHKYWLI 280 (406)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~---------~~~i~~~~~~ 280 (406)
......+++||+.+++.+.+.. +..+ ...+.. ++ .+|+..-. ...+++|++.
T Consensus 114 ---------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 114 ---------NSALYLFECYDTRTESWHTKPS-MLTQRCSHGMVEA-NG-LIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp ---------BSCCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCEESCTTTCEECCCEEEEETT
T ss_pred ---------CcEeeeEEEEeCCCCceEeCCC-CcCCcceeEEEEE-CC-EEEEECCCCCCCCcccccceEEEeCCC
Confidence 1123569999999998877632 2222 233332 34 46665321 3457788764
No 347
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=53.91 E-value=1.1e+02 Score=26.64 Aligned_cols=105 Identities=16% Similarity=0.224 Sum_probs=58.0
Q ss_pred CCcEEEEeCC------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~~------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.|||.-.. ..++++|+.+++.+.+...... . .-...++ -+|.||+......
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r-~~~~~~~-~~~~iyv~GG~~~----------------- 170 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA--R-EGAGLVV-ASGVIYCLGGYDG----------------- 170 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC--C-BSCEEEE-ETTEEEEECCBCS-----------------
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC--c-ccceEEE-ECCEEEEECCCCC-----------------
Confidence 5788887431 3589999998887765432111 1 1112222 2678888642100
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC-----CCeEEEEEee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-----VGRLHKYWLI 280 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~-----~~~i~~~~~~ 280 (406)
......+++||+++++.+.+.. +..+ ..++.. ++ .+|+..-. ...+++|++.
T Consensus 171 ----------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 171 ----------LNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVALL-ND-HIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp ----------SCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETT
T ss_pred ----------CcccceEEEEeCCCCcEEeCCC-CCcccccceEEEE-CC-EEEEEeCCCCCcccceEEEEeCC
Confidence 0112469999999998877632 2222 223332 33 56665321 2468888864
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=52.32 E-value=26 Score=32.52 Aligned_cols=23 Identities=30% Similarity=0.231 Sum_probs=18.8
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeE
Q 015463 142 TGDLYIADAYFGLMKVGPEGGLA 164 (406)
Q Consensus 142 ~g~L~Vad~~~gl~~~d~~~~~~ 164 (406)
++.+||++..+.|+.+|.++|+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~ 32 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHI 32 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcE
Confidence 46789998888899999888764
No 349
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=51.14 E-value=1.3e+02 Score=26.55 Aligned_cols=96 Identities=9% Similarity=0.038 Sum_probs=51.0
Q ss_pred EEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccCCCCCCCcccCCCCeEE
Q 015463 154 LMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSLNDPSPIKITKDTGRVL 233 (406)
Q Consensus 154 l~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~g~l~ 233 (406)
++++|+.+++.+.+...... ..-..+++. ++.||+.-....... ......++
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~-~~~lyv~GG~~~~~~------------------------~~~~~~~~ 120 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSP---RCLFGLGEA-LNSIYVVGGREIKDG------------------------ERCLDSVM 120 (315)
T ss_dssp EEEEETTTTEEEECCCBSSC---EESCEEEEE-TTEEEEECCEESSTT------------------------CCBCCCEE
T ss_pred eEEecCCCCeEEECCCCCcc---hhceeEEEE-CCEEEEEeCCcCCCC------------------------CcccceEE
Confidence 88999999887765432111 111122332 678888642100000 11135699
Q ss_pred EEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC------CCeEEEEEee
Q 015463 234 KYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS------VGRLHKYWLI 280 (406)
Q Consensus 234 ~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~------~~~i~~~~~~ 280 (406)
+||+.+++.+.+.. +..+ ...+. -++ .+|+..-. ...+++|++.
T Consensus 121 ~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 121 CYDRLSFKWGESDP-LPYVVYGHTVLS-HMD-LVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp EEETTTTEEEECCC-CSSCCBSCEEEE-ETT-EEEEECCBCTTSCBCCCEEEEETT
T ss_pred EECCCCCcEeECCC-CCCcccceeEEE-ECC-EEEEEeCCCCCCcccceEEEEeCC
Confidence 99999988776542 2222 23333 234 46666422 1458888865
No 350
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=48.56 E-value=1.4e+02 Score=30.51 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=27.6
Q ss_pred CcEEEEeCCCcEEEEeCCCCeEEEcccccCCcccccccceEEcCC--CCEEEEeC
Q 015463 143 GDLYIADAYFGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDE--GNVYFTDS 195 (406)
Q Consensus 143 g~L~Vad~~~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~d--G~ly~t~~ 195 (406)
..++.+....||++-+-.+...+.+..............|++++. +++|++..
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~ 110 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAE 110 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEEC
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEe
Confidence 344444444678887655555666544322222223467889873 37888763
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=43.36 E-value=2.8e+02 Score=28.10 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=62.8
Q ss_pred CCcEEEEeCC-------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhcccccccccccc
Q 015463 142 TGDLYIADAY-------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLC 214 (406)
Q Consensus 142 ~g~L~Vad~~-------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~ 214 (406)
++.|||.-.. +-++++|+.+.+.+.+..... ...-...++-.+|.||+--...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~---~R~~h~~~~~~~~~iyv~GG~~----------------- 510 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH---TRFRHSACSLPDGNVLILGGVT----------------- 510 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB---CCBSCEEEECTTSCEEEECCBC-----------------
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC---CcccceEEEEcCCEEEEECCCC-----------------
Confidence 4678876421 348999999887776542211 1122233443478899874210
Q ss_pred ccCCCCCCCcccCCCCeEEEEeCCCCeEEEeccc--CCC----cceEEEecCCCEEEEEeCC-------CCeEEEEEeeC
Q 015463 215 SSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRN--LQF----PNGLSLSKDKSFFVFCEGS-------VGRLHKYWLIG 281 (406)
Q Consensus 215 ~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~----~ngi~l~~d~~~l~v~~t~-------~~~i~~~~~~g 281 (406)
. .+.+++||+.+++.+.+... ... ...+++..+.+.+|+..-. .+.+++|++..
T Consensus 511 -----------~--~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 511 -----------E--GPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp -----------S--SCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred -----------C--CCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 0 11699999999988776531 111 1225555553567776421 25699999874
Q ss_pred C
Q 015463 282 E 282 (406)
Q Consensus 282 ~ 282 (406)
.
T Consensus 578 ~ 578 (695)
T 2zwa_A 578 E 578 (695)
T ss_dssp T
T ss_pred C
Confidence 3
No 352
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=39.29 E-value=2.1e+02 Score=25.58 Aligned_cols=81 Identities=25% Similarity=0.267 Sum_probs=43.3
Q ss_pred CCcEEEEeC--CCcEEEEeCCC--CeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccccC
Q 015463 142 TGDLYIADA--YFGLMKVGPEG--GLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCSSL 217 (406)
Q Consensus 142 ~g~L~Vad~--~~gl~~~d~~~--~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~e~ 217 (406)
++.|||.-. .+.++++|+.+ .+.+.+... ...+ ..-..+++. +|.||+--........ .
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~-p~~~-R~~~~~~~~-~~~lyv~GG~~~~~~~--------~------ 81 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAF-PGGP-RDQATSAFI-DGNLYVFGGIGKNSEG--------L------ 81 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCC-TTCC-CBSCEEEEE-TTEEEEECCEEECTTS--------C------
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCC-CCCc-CccceEEEE-CCEEEEEcCCCCCCCc--------c------
Confidence 678888643 24699999974 556655432 1111 111222332 6788886321000000 0
Q ss_pred CCCCCCcccCCCCeEEEEeCCCCeEEEecc
Q 015463 218 NDPSPIKITKDTGRVLKYDPTTKQTTVLLR 247 (406)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~ 247 (406)
......+++||+.+++.+.+..
T Consensus 82 --------~~~~~~v~~yd~~~~~W~~~~~ 103 (357)
T 2uvk_A 82 --------TQVFNDVHKYNPKTNSWVKLMS 103 (357)
T ss_dssp --------EEECCCEEEEETTTTEEEECSC
T ss_pred --------ceeeccEEEEeCCCCcEEECCC
Confidence 0112469999999998877653
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=34.83 E-value=2.3e+02 Score=24.81 Aligned_cols=107 Identities=13% Similarity=0.169 Sum_probs=56.7
Q ss_pred CCcEEEEeCC-----C-------cEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccc
Q 015463 142 TGDLYIADAY-----F-------GLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENI 209 (406)
Q Consensus 142 ~g~L~Vad~~-----~-------gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~ 209 (406)
++.|||.-.. . -++++|+.+++.+.+...... ..-..+++. ++.||+.-......
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~-~~~iyv~GG~~~~~--------- 122 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---RCLFGLGEV-DDKIYVVAGKDLQT--------- 122 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---BCSCEEEEE-TTEEEEEEEEBTTT---------
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---ccccceEEE-CCEEEEEcCccCCC---------
Confidence 6778776431 0 188999998887766432111 111223333 67888864210000
Q ss_pred cccccccCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC------CCeEEEEEee
Q 015463 210 PLQLCSSLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS------VGRLHKYWLI 280 (406)
Q Consensus 210 ~~~~~~e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~------~~~i~~~~~~ 280 (406)
......+++||+.+++.+.+.. +..+ ...+. .++ .+|+..-. .+.+++|++.
T Consensus 123 ----------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 123 ----------------EASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp ----------------CCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETT-EEEEECCEESSSCBCCCEEEEETT
T ss_pred ----------------CcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECC-EEEEEcCCCCCCCccceEEEEcCC
Confidence 0112469999999988877642 2222 23333 344 46665321 2458888865
No 354
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=31.87 E-value=2.5e+02 Score=24.28 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=56.9
Q ss_pred CCcEEEEeCC------CcEEEEeCCCCeEEEcccccCCcccccccceEEcCCCCEEEEeCCCchhhhccccccccccccc
Q 015463 142 TGDLYIADAY------FGLMKVGPEGGLATSLATEAEGVPLRFTNDLDIDDEGNVYFTDSSTNYQRRQMQKENIPLQLCS 215 (406)
Q Consensus 142 ~g~L~Vad~~------~gl~~~d~~~~~~~~l~~~~~~~~~~~~~~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
++.|||.-.. +.++++|+.+.+.+.+...... ..-...++ -+|.||+......
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~~----------------- 119 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR---RSTLGAAV-LNGLLYAVGGFDG----------------- 119 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEE-ETTEEEEEEEECS-----------------
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc---ccceEEEE-ECCEEEEEcCCCC-----------------
Confidence 5788886431 3589999999887766432111 11122222 2678887642100
Q ss_pred cCCCCCCCcccCCCCeEEEEeCCCCeEEEecccCCCc---ceEEEecCCCEEEEEeCC-------CCeEEEEEee
Q 015463 216 SLNDPSPIKITKDTGRVLKYDPTTKQTTVLLRNLQFP---NGLSLSKDKSFFVFCEGS-------VGRLHKYWLI 280 (406)
Q Consensus 216 e~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~~---ngi~l~~d~~~l~v~~t~-------~~~i~~~~~~ 280 (406)
......+++||+.+++.+.+.. +..+ ..++.. ++ .+|+..-. ...+++|++.
T Consensus 120 ----------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~ 181 (302)
T 2xn4_A 120 ----------STGLSSVEAYNIKSNEWFHVAP-MNTRRSSVGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNAT 181 (302)
T ss_dssp ----------SCEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCEETTTTEECCCEEEEETT
T ss_pred ----------CccCceEEEEeCCCCeEeecCC-CCCcccCceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCC
Confidence 0011458999999998877642 2222 233332 33 46665311 2457888864
No 355
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=31.79 E-value=3.3e+02 Score=26.72 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=42.1
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEeCC-ceeEEEeecCC-CccccCCCC--CcccccccCCcCCcceEEEEeCCCCcEEE
Q 015463 72 ESMAFDPLGRGPYTGVADGRILFWDGL-KWTDFAFTSNN-RSELCNPKP--IATSYLKNEHICGRPLGLRFDKKTGDLYI 147 (406)
Q Consensus 72 e~i~~d~~g~~ly~g~~~g~I~~~~~~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~p~gi~~d~~~g~L~V 147 (406)
..+++|++++.+|+|..| +|++++.+ ....-....+. .+..|.+.. ..|.... ....+...-+.++..++.||+
T Consensus 21 ~~l~~d~~~g~lyvGA~n-~ly~Ls~~L~~~~~~~tgP~~ds~~C~p~~~~~~C~~~~-~~~dN~nkvLl~~~~~~~L~~ 98 (539)
T 3al9_A 21 NHLTVHRRTGAVYVGAIN-RVYKLTGNLTIQVAHKTGPEEDNKACYPPLIVQPCSEVL-TLTNNVNKLLIIDYSENRLLA 98 (539)
T ss_dssp EEEEECTTTCCEEEEETT-EEEEECTTCCEEEEEECCCEEECTTCSSCTTTSCCCSCC-EEECCCEEEEEEEGGGTEEEE
T ss_pred EEEEEeCCCCEEEEEEee-eEEECCCCcccccccccCCccCcccccCccchhhccccC-CCCCceEEEEEEecCCCeEEE
Confidence 567788766569999876 69999976 32221111111 111232210 1111100 011233334666664678998
Q ss_pred EeCC-CcEEEE
Q 015463 148 ADAY-FGLMKV 157 (406)
Q Consensus 148 ad~~-~gl~~~ 157 (406)
+-+. .|+..+
T Consensus 99 CGS~~qg~C~~ 109 (539)
T 3al9_A 99 CGSLYQGVCKL 109 (539)
T ss_dssp EESSTTTCEEE
T ss_pred eecCCCCCcee
Confidence 8654 566443
No 356
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.84 E-value=3.8e+02 Score=24.78 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=30.8
Q ss_pred CcCCcceEEEEeCCCCcEEEEeCCCcEEEEeCCCCeEE
Q 015463 128 HICGRPLGLRFDKKTGDLYIADAYFGLMKVGPEGGLAT 165 (406)
Q Consensus 128 ~~~~~p~gi~~d~~~g~L~Vad~~~gl~~~d~~~~~~~ 165 (406)
....-|..|.++..-|-+|+-+-++=|+.||.+++..-
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 34677999999886788999998777999999988643
No 357
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.90 E-value=2e+02 Score=28.26 Aligned_cols=68 Identities=16% Similarity=0.163 Sum_probs=40.1
Q ss_pred eEEEcCC--CCeeEEEecCCEEEEEeCC-c--e-eEEEeecCCCccccCCCCCcccccccCCcCCcce--EEEEeCCCCc
Q 015463 73 SMAFDPL--GRGPYTGVADGRILFWDGL-K--W-TDFAFTSNNRSELCNPKPIATSYLKNEHICGRPL--GLRFDKKTGD 144 (406)
Q Consensus 73 ~i~~d~~--g~~ly~g~~~g~I~~~~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--gi~~d~~~g~ 144 (406)
+|+++.. -.++|+||.+|+|.|+... . . ..+... .... .+.|. .|.++++.+.
T Consensus 404 ~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~------------------~v~~-~~~pv~~~l~~~~~~~~ 464 (539)
T 3al9_A 404 SVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMV------------------SVFK-DGSPILRDMAFSINQLY 464 (539)
T ss_dssp EEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEE------------------ECCT-TCCCCCSCCEECTTSSE
T ss_pred EEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEE------------------Eeec-CCCccccceEEccCCCe
Confidence 4555533 3478999999999998543 1 1 111100 0111 12332 6888886778
Q ss_pred EEEEeCCCcEEEEeCC
Q 015463 145 LYIADAYFGLMKVGPE 160 (406)
Q Consensus 145 L~Vad~~~gl~~~d~~ 160 (406)
|||++. .+|.++...
T Consensus 465 Lyv~s~-~~V~kvpl~ 479 (539)
T 3al9_A 465 LYVMSE-RQVTRVPVE 479 (539)
T ss_dssp EEEECS-SEEEEEESC
T ss_pred EEEEec-cccceeehh
Confidence 999864 578887654
Done!