Query 015467
Match_columns 406
No_of_seqs 114 out of 778
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 06:35:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015467.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015467hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01301 GPH_sucrose GPH fami 100.0 1E-66 2.2E-71 539.4 23.0 345 3-406 85-433 (477)
2 KOG0637 Sucrose transporter an 100.0 1.5E-63 3.2E-68 498.8 13.3 344 1-406 111-459 (498)
3 PF13347 MFS_2: MFS/sugar tran 99.8 2E-19 4.4E-24 184.0 13.9 281 19-404 57-371 (428)
4 TIGR00792 gph sugar (Glycoside 99.6 1.4E-14 3.1E-19 147.3 19.0 281 19-404 55-367 (437)
5 PRK10429 melibiose:sodium symp 99.6 1.5E-13 3.2E-18 142.9 21.1 285 19-402 62-378 (473)
6 PRK09669 putative symporter Ya 99.5 1.8E-12 3.9E-17 133.3 18.6 275 19-403 65-374 (444)
7 COG2211 MelB Na+/melibiose sym 99.4 4.3E-12 9.3E-17 130.8 18.5 275 20-399 69-378 (467)
8 PRK11462 putative transporter; 99.4 2.5E-11 5.4E-16 126.1 20.3 270 19-399 65-369 (460)
9 TIGR00901 2A0125 AmpG-related 99.3 2.8E-11 6.1E-16 120.1 16.9 259 50-400 96-354 (356)
10 TIGR00900 2A0121 H+ Antiporter 99.3 6.9E-11 1.5E-15 115.8 15.3 247 48-405 103-351 (365)
11 PRK09848 glucuronide transport 99.2 5E-10 1.1E-14 115.3 18.1 143 229-404 228-375 (448)
12 PRK11551 putative 3-hydroxyphe 99.1 1.1E-09 2.4E-14 110.5 16.2 245 47-404 113-357 (406)
13 TIGR00710 efflux_Bcr_CflA drug 99.1 3.3E-09 7.1E-14 105.4 17.0 241 48-400 104-344 (385)
14 TIGR00893 2A0114 d-galactonate 99.1 2.2E-09 4.8E-14 105.5 15.1 268 47-405 92-361 (399)
15 PF07690 MFS_1: Major Facilita 99.1 8.2E-10 1.8E-14 107.8 11.5 254 47-404 95-348 (352)
16 TIGR00899 2A0120 sugar efflux 99.1 3.8E-09 8.3E-14 104.7 15.9 232 53-404 103-336 (375)
17 cd06174 MFS The Major Facilita 99.0 8.1E-09 1.8E-13 100.1 15.4 219 45-404 95-314 (352)
18 PRK11195 lysophospholipid tran 99.0 1.2E-08 2.6E-13 103.6 15.9 242 50-404 101-343 (393)
19 PF11700 ATG22: Vacuole efflux 99.0 1.3E-08 2.9E-13 106.4 16.2 258 47-399 136-424 (477)
20 TIGR00881 2A0104 phosphoglycer 99.0 1.5E-08 3.3E-13 99.6 15.1 266 48-405 94-360 (379)
21 TIGR00895 2A0115 benzoate tran 98.9 7.3E-09 1.6E-13 102.7 11.9 274 44-404 112-387 (398)
22 PRK10473 multidrug efflux syst 98.9 6.8E-08 1.5E-12 97.2 18.2 186 49-329 103-288 (392)
23 PRK11010 ampG muropeptide tran 98.9 2.9E-08 6.3E-13 104.1 16.0 80 49-143 119-198 (491)
24 TIGR00886 2A0108 nitrite extru 98.9 4.3E-08 9.4E-13 96.9 15.8 259 52-402 105-364 (366)
25 TIGR00883 2A0106 metabolite-pr 98.9 6.4E-08 1.4E-12 95.6 16.4 252 49-402 108-360 (394)
26 PRK08633 2-acyl-glycerophospho 98.9 4.2E-08 9E-13 112.0 16.9 255 51-404 117-371 (1146)
27 PRK06814 acylglycerophosphoeth 98.9 3.5E-08 7.5E-13 113.1 16.3 259 52-404 123-383 (1140)
28 PRK03545 putative arabinose tr 98.9 6.7E-08 1.5E-12 97.4 15.9 227 55-403 115-341 (390)
29 PRK11102 bicyclomycin/multidru 98.8 2.1E-07 4.5E-12 92.7 18.9 183 48-322 90-272 (377)
30 PRK09874 drug efflux system pr 98.8 1.6E-07 3.5E-12 94.4 18.3 239 53-404 122-360 (408)
31 PRK10489 enterobactin exporter 98.8 1.2E-07 2.5E-12 96.5 16.5 236 54-405 127-362 (417)
32 PRK14995 methyl viologen resis 98.8 5.6E-08 1.2E-12 101.7 14.5 275 57-404 114-400 (495)
33 TIGR00890 2A0111 Oxalate/Forma 98.8 6.2E-08 1.3E-12 95.1 13.8 101 285-405 245-345 (377)
34 TIGR00891 2A0112 putative sial 98.8 5E-08 1.1E-12 97.2 13.2 81 49-143 112-192 (405)
35 TIGR00898 2A0119 cation transp 98.8 1.2E-07 2.6E-12 98.7 15.3 267 48-404 191-459 (505)
36 PRK11646 multidrug resistance 98.8 3.5E-07 7.5E-12 93.1 18.0 78 48-141 110-187 (400)
37 TIGR00879 SP MFS transporter, 98.8 9.1E-08 2E-12 96.8 13.6 80 48-143 138-220 (481)
38 PRK11902 ampG muropeptide tran 98.8 2.5E-07 5.4E-12 93.8 16.3 74 54-142 111-184 (402)
39 TIGR00711 efflux_EmrB drug res 98.7 1.5E-07 3.2E-12 97.0 13.7 283 48-404 101-397 (485)
40 PF05977 MFS_3: Transmembrane 98.7 1.7E-07 3.7E-12 99.2 13.8 233 52-398 117-350 (524)
41 PF03209 PUCC: PUCC protein; 98.7 1E-06 2.2E-11 89.4 17.7 255 41-401 93-347 (403)
42 PRK10213 nepI ribonucleoside t 98.6 7.5E-07 1.6E-11 90.5 15.2 80 48-142 119-198 (394)
43 PRK15011 sugar efflux transpor 98.6 1.3E-06 2.9E-11 88.3 16.5 69 60-143 128-198 (393)
44 TIGR00902 2A0127 phenyl propri 98.6 1.4E-06 3.1E-11 87.7 16.4 131 229-398 205-335 (382)
45 PRK11128 putative 3-phenylprop 98.6 1.1E-06 2.3E-11 88.5 15.3 228 50-397 107-334 (382)
46 PRK11663 regulatory protein Uh 98.6 1.6E-06 3.6E-11 89.0 16.7 75 54-143 128-202 (434)
47 PRK12382 putative transporter; 98.5 1.2E-06 2.7E-11 88.0 14.2 97 286-404 255-351 (392)
48 PRK05122 major facilitator sup 98.5 1.8E-06 3.9E-11 87.0 15.3 98 285-404 254-351 (399)
49 TIGR00712 glpT glycerol-3-phos 98.5 4.8E-06 1E-10 85.5 18.4 181 54-310 135-317 (438)
50 PRK10077 xylE D-xylose transpo 98.5 8.9E-07 1.9E-11 91.3 13.0 86 50-143 133-218 (479)
51 PRK10091 MFS transport protein 98.5 3.5E-06 7.7E-11 84.8 15.7 178 51-327 105-282 (382)
52 TIGR00897 2A0118 polyol permea 98.5 7.6E-06 1.6E-10 83.0 18.1 142 229-405 222-364 (402)
53 TIGR02332 HpaX 4-hydroxyphenyl 98.5 3.2E-06 6.9E-11 86.4 15.4 198 54-313 113-312 (412)
54 PRK10504 putative transporter; 98.5 3.7E-06 8E-11 86.8 15.5 284 49-403 110-401 (471)
55 PRK10642 proline/glycine betai 98.4 6.7E-06 1.5E-10 85.9 16.7 87 49-143 130-216 (490)
56 PRK11273 glpT sn-glycerol-3-ph 98.4 1E-05 2.2E-10 83.6 17.8 179 54-308 137-317 (452)
57 PRK09952 shikimate transporter 98.4 4.8E-06 1E-10 85.8 15.2 242 48-387 136-377 (438)
58 PRK10054 putative transporter; 98.4 3.3E-06 7.1E-11 85.8 13.1 70 57-142 116-185 (395)
59 TIGR01299 synapt_SV2 synaptic 98.4 3.4E-06 7.4E-11 92.7 14.0 95 286-402 601-695 (742)
60 PRK15402 multidrug efflux syst 98.4 1.6E-05 3.5E-10 80.4 17.7 239 55-404 119-357 (406)
61 TIGR00882 2A0105 oligosacchari 98.4 8.8E-06 1.9E-10 82.2 15.7 139 229-401 215-354 (396)
62 PRK12307 putative sialic acid 98.4 7.6E-06 1.7E-10 83.0 15.0 46 49-94 118-163 (426)
63 PRK10406 alpha-ketoglutarate t 98.4 2.5E-05 5.5E-10 80.0 18.9 77 50-133 137-213 (432)
64 TIGR00903 2A0129 major facilit 98.3 1.5E-05 3.2E-10 80.7 16.2 123 57-257 98-220 (368)
65 TIGR00894 2A0114euk Na(+)-depe 98.3 5.4E-06 1.2E-10 85.6 13.2 182 50-308 144-325 (465)
66 PRK15075 citrate-proton sympor 98.3 2.2E-05 4.9E-10 80.5 17.5 40 55-94 135-174 (434)
67 TIGR02718 sider_RhtX_FptX side 98.3 1.9E-05 4.1E-10 79.6 16.3 145 229-404 208-353 (390)
68 PRK11043 putative transporter; 98.3 3.5E-05 7.5E-10 77.7 18.2 96 286-399 244-339 (401)
69 PRK11652 emrD multidrug resist 98.3 1.7E-05 3.6E-10 79.9 15.8 73 55-142 114-186 (394)
70 PRK10133 L-fucose transporter; 98.3 3E-05 6.6E-10 80.1 18.0 132 231-400 260-391 (438)
71 PRK03699 putative transporter; 98.3 2.7E-05 5.9E-10 78.7 16.0 136 229-402 205-340 (394)
72 TIGR00892 2A0113 monocarboxyla 98.3 1.4E-05 3.1E-10 82.8 14.1 256 52-406 123-384 (455)
73 PRK09556 uhpT sugar phosphate 98.2 1.2E-05 2.6E-10 83.4 13.0 257 54-402 139-396 (467)
74 PRK15403 multidrug efflux syst 98.2 7.2E-05 1.6E-09 76.5 17.7 73 55-142 122-194 (413)
75 PRK09528 lacY galactoside perm 98.2 2.2E-05 4.8E-10 79.9 13.4 92 286-399 268-360 (420)
76 COG2814 AraJ Arabinose efflux 98.2 3.6E-05 7.8E-10 78.4 14.5 184 48-329 112-295 (394)
77 COG2270 Permeases of the major 98.2 2.2E-05 4.7E-10 80.0 12.7 258 41-399 119-385 (438)
78 PRK09705 cynX putative cyanate 98.1 2.1E-05 4.5E-10 79.7 12.0 136 230-403 206-341 (393)
79 TIGR01272 gluP glucose/galacto 98.1 0.00017 3.7E-09 71.2 18.0 247 38-383 11-260 (310)
80 PRK03893 putative sialic acid 98.1 4.5E-05 9.7E-10 79.1 14.4 47 49-95 120-166 (496)
81 TIGR00896 CynX cyanate transpo 98.1 5.4E-05 1.2E-09 75.1 14.0 135 229-401 197-332 (355)
82 TIGR00887 2A0109 phosphate:H+ 98.1 5.2E-05 1.1E-09 79.5 14.5 97 47-144 125-229 (502)
83 TIGR00788 fbt folate/biopterin 98.0 1.5E-05 3.3E-10 83.2 8.9 268 45-404 128-400 (468)
84 PLN00028 nitrate transmembrane 98.0 7.2E-05 1.6E-09 78.1 13.6 79 56-141 142-221 (476)
85 PRK03633 putative MFS family t 97.9 0.00029 6.3E-09 70.8 15.7 47 49-95 106-152 (381)
86 PRK10054 putative transporter; 97.9 6.5E-05 1.4E-09 76.3 9.9 140 226-402 4-143 (395)
87 TIGR00889 2A0110 nucleoside tr 97.8 0.00015 3.3E-09 74.4 11.3 143 230-398 209-351 (418)
88 TIGR00885 fucP L-fucose:H+ sym 97.7 0.001 2.2E-08 68.1 16.1 47 49-95 106-152 (410)
89 KOG2615 Permease of the major 97.7 0.0003 6.4E-09 71.0 11.3 42 54-95 137-178 (451)
90 KOG0569 Permease of the major 97.7 0.00059 1.3E-08 71.5 13.6 270 48-387 127-402 (485)
91 TIGR00805 oat sodium-independe 97.6 0.0011 2.5E-08 71.9 15.0 59 37-95 172-230 (633)
92 KOG2532 Permease of the major 97.6 0.00036 7.9E-09 73.0 10.4 254 57-405 148-407 (466)
93 PRK11646 multidrug resistance 97.6 0.00026 5.6E-09 72.1 9.0 142 224-404 7-148 (400)
94 PRK03633 putative MFS family t 97.4 0.0006 1.3E-08 68.5 8.3 138 227-402 4-141 (381)
95 PRK10091 MFS transport protein 97.3 0.00093 2E-08 67.2 9.4 139 227-403 1-139 (382)
96 PF07690 MFS_1: Major Facilita 97.3 0.001 2.2E-08 64.8 9.2 134 234-404 1-134 (352)
97 TIGR00891 2A0112 putative sial 97.3 0.0012 2.7E-08 65.5 10.1 136 231-404 14-149 (405)
98 TIGR00924 yjdL_sub1_fam amino 97.3 0.0011 2.3E-08 69.5 9.8 144 226-403 7-153 (475)
99 TIGR00924 yjdL_sub1_fam amino 97.3 0.0036 7.8E-08 65.5 13.4 105 286-403 318-429 (475)
100 KOG0254 Predicted transporter 97.3 0.0041 8.9E-08 65.5 13.8 273 47-384 152-426 (513)
101 PF00083 Sugar_tr: Sugar (and 97.3 1.9E-06 4.1E-11 88.2 -11.2 84 49-145 114-197 (451)
102 PRK10207 dipeptide/tripeptide 97.3 0.0017 3.7E-08 68.3 10.6 142 226-401 11-153 (489)
103 KOG2816 Predicted transporter 97.2 0.0084 1.8E-07 62.8 15.2 77 53-144 128-204 (463)
104 cd06174 MFS The Major Facilita 97.2 0.0013 2.7E-08 63.6 8.2 135 232-404 2-136 (352)
105 TIGR00880 2_A_01_02 Multidrug 97.2 0.00078 1.7E-08 56.0 5.7 96 287-404 5-100 (141)
106 PRK11195 lysophospholipid tran 97.1 0.0014 3E-08 66.6 8.2 137 227-404 1-137 (393)
107 PRK09584 tppB putative tripept 97.1 0.0028 6.2E-08 66.7 10.6 143 226-402 18-161 (500)
108 PRK09584 tppB putative tripept 97.1 0.0061 1.3E-07 64.3 12.6 92 298-402 338-429 (500)
109 TIGR00900 2A0121 H+ Antiporter 97.1 0.0018 3.8E-08 63.3 7.9 140 232-404 2-141 (365)
110 PRK09556 uhpT sugar phosphate 97.0 0.0028 6.2E-08 65.7 9.6 104 284-404 68-171 (467)
111 PRK15403 multidrug efflux syst 97.0 0.0019 4.1E-08 66.1 8.1 99 282-402 53-151 (413)
112 PRK10207 dipeptide/tripeptide 97.0 0.017 3.6E-07 60.8 15.0 105 288-404 317-428 (489)
113 PRK15034 nitrate/nitrite trans 97.0 0.011 2.4E-07 61.9 13.4 183 54-324 144-330 (462)
114 KOG1330 Sugar transporter/spin 97.0 0.0031 6.8E-08 65.1 8.9 73 57-143 141-213 (493)
115 TIGR00881 2A0104 phosphoglycer 96.9 0.0018 3.9E-08 63.4 6.8 99 284-404 34-132 (379)
116 TIGR00897 2A0118 polyol permea 96.9 0.0044 9.5E-08 62.8 9.5 144 226-403 10-153 (402)
117 TIGR00895 2A0115 benzoate tran 96.9 0.0046 1E-07 61.1 9.0 96 286-403 58-153 (398)
118 TIGR00711 efflux_EmrB drug res 96.8 0.0048 1E-07 63.5 9.2 100 283-404 40-139 (485)
119 PRK10504 putative transporter; 96.8 0.0041 8.9E-08 64.1 8.5 135 230-402 11-145 (471)
120 PRK11663 regulatory protein Uh 96.8 0.0048 1E-07 63.3 8.8 98 284-403 62-159 (434)
121 PRK12307 putative sialic acid 96.8 0.0088 1.9E-07 60.6 10.5 98 284-403 57-154 (426)
122 PRK05122 major facilitator sup 96.7 0.01 2.3E-07 59.6 10.7 144 229-401 15-158 (399)
123 PRK10077 xylE D-xylose transpo 96.7 0.0042 9.2E-08 63.9 8.0 111 284-404 59-169 (479)
124 PRK03545 putative arabinose tr 96.7 0.0043 9.3E-08 62.4 7.8 98 284-403 48-145 (390)
125 PRK12382 putative transporter; 96.7 0.013 2.7E-07 58.9 10.9 144 229-401 15-158 (392)
126 TIGR00882 2A0105 oligosacchari 96.7 0.01 2.2E-07 59.9 10.2 81 229-324 2-82 (396)
127 PRK09874 drug efflux system pr 96.6 0.015 3.2E-07 58.3 10.9 140 230-403 15-154 (408)
128 PRK03893 putative sialic acid 96.6 0.0086 1.9E-07 62.0 9.3 98 284-403 59-156 (496)
129 PRK08633 2-acyl-glycerophospho 96.6 0.0089 1.9E-07 68.6 10.2 143 229-403 9-151 (1146)
130 TIGR00890 2A0111 Oxalate/Forma 96.6 0.0074 1.6E-07 59.0 8.1 97 284-403 42-138 (377)
131 TIGR00886 2A0108 nitrite extru 96.6 0.0099 2.1E-07 58.6 9.0 130 231-397 3-132 (366)
132 TIGR00710 efflux_Bcr_CflA drug 96.6 0.0089 1.9E-07 59.2 8.7 98 284-403 44-141 (385)
133 PRK09705 cynX putative cyanate 96.6 0.0099 2.2E-07 60.2 9.2 97 282-401 46-142 (393)
134 TIGR02332 HpaX 4-hydroxyphenyl 96.6 0.0081 1.8E-07 61.3 8.5 98 284-403 47-144 (412)
135 PRK11551 putative 3-hydroxyphe 96.5 0.013 2.7E-07 59.1 9.5 98 284-403 54-151 (406)
136 KOG0637 Sucrose transporter an 96.5 0.0069 1.5E-07 62.6 7.4 119 19-150 87-239 (498)
137 TIGR00898 2A0119 cation transp 96.5 0.0059 1.3E-07 63.6 6.8 98 283-402 130-227 (505)
138 PRK10213 nepI ribonucleoside t 96.4 0.0077 1.7E-07 61.1 7.2 97 284-402 59-155 (394)
139 PF05978 UNC-93: Ion channel r 96.4 0.012 2.7E-07 52.5 7.6 100 280-400 37-138 (156)
140 TIGR01299 synapt_SV2 synaptic 96.4 0.007 1.5E-07 66.9 7.1 96 286-403 208-303 (742)
141 TIGR00893 2A0114 d-galactonate 96.3 0.0049 1.1E-07 60.3 5.2 99 284-404 33-131 (399)
142 PRK03699 putative transporter; 96.3 0.022 4.7E-07 57.5 9.8 92 286-399 48-139 (394)
143 TIGR00879 SP MFS transporter, 96.3 0.0099 2.1E-07 60.0 7.2 104 283-405 74-177 (481)
144 COG2223 NarK Nitrate/nitrite t 96.3 0.021 4.6E-07 58.4 9.4 223 55-383 122-344 (417)
145 PF06609 TRI12: Fungal trichot 96.3 0.27 5.8E-06 53.1 18.1 141 228-400 309-450 (599)
146 PRK15462 dipeptide/tripeptide 96.3 0.038 8.3E-07 58.3 11.5 84 227-325 7-91 (493)
147 TIGR00899 2A0120 sugar efflux 96.3 0.019 4.1E-07 56.7 8.8 128 236-398 4-132 (375)
148 PRK10642 proline/glycine betai 96.2 0.022 4.7E-07 59.6 9.7 95 291-399 68-162 (490)
149 PRK09952 shikimate transporter 96.2 0.027 5.9E-07 58.0 10.1 95 293-402 77-172 (438)
150 PRK11652 emrD multidrug resist 96.2 0.028 6E-07 56.5 9.8 98 283-402 46-143 (394)
151 PLN00028 nitrate transmembrane 96.2 0.036 7.8E-07 57.8 10.9 90 286-398 77-166 (476)
152 KOG0255 Synaptic vesicle trans 96.2 0.017 3.7E-07 60.7 8.5 76 49-143 183-258 (521)
153 PRK09528 lacY galactoside perm 96.2 0.025 5.3E-07 57.6 9.3 80 229-323 10-89 (420)
154 TIGR00883 2A0106 metabolite-pr 96.1 0.016 3.5E-07 57.0 7.5 96 294-403 49-144 (394)
155 PRK15402 multidrug efflux syst 96.1 0.024 5.2E-07 57.2 8.6 82 283-384 51-132 (406)
156 PRK11043 putative transporter; 96.1 0.04 8.7E-07 55.4 10.2 130 231-397 5-136 (401)
157 PRK11273 glpT sn-glycerol-3-ph 96.0 0.039 8.6E-07 56.9 10.3 101 284-402 67-167 (452)
158 PRK10489 enterobactin exporter 96.0 0.014 3.1E-07 59.2 6.8 143 229-404 17-159 (417)
159 PRK06814 acylglycerophosphoeth 96.0 0.035 7.6E-07 64.1 10.5 107 280-405 52-158 (1140)
160 TIGR00887 2A0109 phosphate:H+ 96.0 0.016 3.5E-07 60.7 7.1 105 284-404 60-164 (502)
161 PRK15034 nitrate/nitrite trans 95.8 0.05 1.1E-06 57.0 9.6 134 235-404 43-180 (462)
162 PRK10473 multidrug efflux syst 95.7 0.054 1.2E-06 54.3 9.3 94 284-399 42-135 (392)
163 PRK15011 sugar efflux transpor 95.7 0.067 1.4E-06 54.0 9.8 141 228-403 14-155 (393)
164 TIGR00880 2_A_01_02 Multidrug 95.6 0.024 5.2E-07 46.8 5.4 82 45-141 59-140 (141)
165 PRK11102 bicyclomycin/multidru 95.6 0.037 8E-07 54.9 7.6 97 284-402 30-126 (377)
166 PRK10406 alpha-ketoglutarate t 95.5 0.06 1.3E-06 55.2 8.8 94 293-400 76-169 (432)
167 TIGR00712 glpT glycerol-3-phos 95.5 0.043 9.4E-07 56.3 7.8 103 284-404 65-167 (438)
168 COG0738 FucP Fucose permease [ 95.4 1.4 3E-05 45.3 18.0 53 43-95 110-162 (422)
169 KOG0255 Synaptic vesicle trans 95.3 0.033 7.1E-07 58.5 6.6 97 273-389 111-207 (521)
170 PRK14995 methyl viologen resis 95.3 0.035 7.6E-07 58.1 6.5 99 283-402 44-142 (495)
171 KOG1330 Sugar transporter/spin 95.3 0.027 6E-07 58.4 5.4 96 286-403 74-169 (493)
172 TIGR00896 CynX cyanate transpo 95.2 0.071 1.5E-06 52.7 8.3 97 283-403 38-134 (355)
173 KOG2325 Predicted transporter/ 95.2 0.13 2.8E-06 54.1 10.2 86 53-144 145-234 (488)
174 PRK15075 citrate-proton sympor 95.2 0.14 3E-06 52.5 10.4 135 231-398 17-160 (434)
175 PF01306 LacY_symp: LacY proto 95.1 1.9 4E-05 44.7 18.2 70 293-382 272-341 (412)
176 TIGR00892 2A0113 monocarboxyla 95.1 0.064 1.4E-06 55.6 7.6 94 286-402 60-154 (455)
177 PF03092 BT1: BT1 family; Int 94.9 0.2 4.3E-06 52.0 10.8 83 45-142 94-178 (433)
178 PF13000 Acatn: Acetyl-coenzym 94.8 1.3 2.8E-05 46.8 16.0 46 356-401 404-451 (544)
179 TIGR00903 2A0129 major facilit 94.6 0.071 1.5E-06 53.9 6.5 96 286-404 32-127 (368)
180 PRK10133 L-fucose transporter; 94.6 0.13 2.8E-06 53.1 8.5 99 284-401 65-163 (438)
181 KOG2533 Permease of the major 94.5 0.93 2E-05 48.0 14.5 149 56-258 153-302 (495)
182 KOG3764 Vesicular amine transp 94.4 0.11 2.4E-06 53.1 7.0 109 275-405 102-210 (464)
183 TIGR00885 fucP L-fucose:H+ sym 94.3 0.15 3.4E-06 52.1 8.2 99 284-401 42-140 (410)
184 KOG2504 Monocarboxylate transp 94.2 0.76 1.6E-05 48.8 13.3 138 229-404 298-437 (509)
185 KOG3764 Vesicular amine transp 94.1 0.22 4.8E-06 51.0 8.6 74 52-140 174-248 (464)
186 TIGR00806 rfc RFC reduced fola 94.0 1.3 2.8E-05 46.8 14.2 68 57-137 134-201 (511)
187 TIGR01301 GPH_sucrose GPH fami 94.0 0.19 4.2E-06 52.9 8.2 148 229-404 4-165 (477)
188 TIGR00889 2A0110 nucleoside tr 94.0 0.37 8E-06 49.4 10.2 83 231-328 4-87 (418)
189 PRK11010 ampG muropeptide tran 93.7 0.18 3.9E-06 53.0 7.4 89 295-402 60-154 (491)
190 PF01770 Folate_carrier: Reduc 93.6 2.8 6E-05 43.3 15.6 72 53-137 109-180 (412)
191 PF03825 Nuc_H_symport: Nucleo 93.6 1.5 3.3E-05 45.0 13.9 122 229-384 207-332 (400)
192 TIGR00894 2A0114euk Na(+)-depe 93.5 0.11 2.4E-06 53.5 5.5 99 286-404 82-180 (465)
193 KOG4686 Predicted sugar transp 93.5 0.23 5E-06 48.9 7.2 140 226-401 261-402 (459)
194 KOG2563 Permease of the major 93.1 1.2 2.6E-05 46.4 11.9 76 66-148 169-244 (480)
195 PF05977 MFS_3: Transmembrane 93.0 0.81 1.7E-05 48.8 11.0 125 229-384 10-134 (524)
196 KOG0254 Predicted transporter 92.7 0.29 6.2E-06 51.6 7.1 101 283-405 92-192 (513)
197 COG2271 UhpC Sugar phosphate p 92.5 2.9 6.3E-05 43.3 13.7 253 56-402 136-393 (448)
198 TIGR00901 2A0125 AmpG-related 92.5 0.36 7.7E-06 47.6 7.2 88 297-403 38-131 (356)
199 KOG3626 Organic anion transpor 92.5 1.3 2.7E-05 49.0 11.7 102 35-143 235-347 (735)
200 PF03825 Nuc_H_symport: Nucleo 92.4 1 2.3E-05 46.2 10.6 81 232-328 5-86 (400)
201 COG2814 AraJ Arabinose efflux 92.2 0.55 1.2E-05 48.2 8.1 99 284-404 52-150 (394)
202 PF03137 OATP: Organic Anion T 92.1 0.041 9E-07 58.7 -0.1 63 33-95 137-199 (539)
203 PRK11902 ampG muropeptide tran 91.1 0.64 1.4E-05 47.0 7.4 108 276-402 28-141 (402)
204 KOG3574 Acetyl-CoA transporter 90.5 4 8.7E-05 42.0 12.0 54 38-91 134-187 (510)
205 PTZ00207 hypothetical protein; 90.1 1.6 3.4E-05 47.3 9.5 91 296-403 77-167 (591)
206 TIGR00769 AAA ADP/ATP carrier 89.2 7.3 0.00016 41.0 13.4 47 46-92 137-184 (472)
207 TIGR00788 fbt folate/biopterin 87.2 0.54 1.2E-05 49.1 3.6 46 50-95 364-409 (468)
208 TIGR00806 rfc RFC reduced fola 86.9 1.4 3E-05 46.6 6.3 89 292-403 74-162 (511)
209 COG2807 CynX Cyanate permease 86.8 1.9 4.1E-05 43.8 6.9 88 293-404 60-147 (395)
210 TIGR00902 2A0127 phenyl propri 86.1 4.7 0.0001 40.3 9.6 90 287-402 46-139 (382)
211 PF06609 TRI12: Fungal trichot 85.6 5.8 0.00013 43.0 10.4 83 286-389 84-166 (599)
212 COG2271 UhpC Sugar phosphate p 85.1 4.6 0.0001 41.8 8.8 100 280-402 65-164 (448)
213 PF00083 Sugar_tr: Sugar (and 83.8 0.11 2.4E-06 53.0 -3.5 101 286-405 52-152 (451)
214 KOG0253 Synaptic vesicle trans 83.4 8.7 0.00019 39.6 9.7 30 297-326 398-427 (528)
215 PRK11128 putative 3-phenylprop 81.8 7.5 0.00016 38.8 8.9 75 286-382 45-123 (382)
216 KOG0569 Permease of the major 80.7 11 0.00024 39.8 9.9 88 284-388 64-151 (485)
217 KOG3762 Predicted transporter 80.2 6 0.00013 42.3 7.6 82 51-143 473-555 (618)
218 COG2223 NarK Nitrate/nitrite t 78.1 9.3 0.0002 39.5 8.1 123 235-396 23-145 (417)
219 KOG2615 Permease of the major 77.7 9.7 0.00021 39.2 7.9 124 245-403 44-168 (451)
220 TIGR02718 sider_RhtX_FptX side 77.4 4.8 0.0001 40.3 5.9 45 280-324 37-84 (390)
221 PRK15462 dipeptide/tripeptide 77.1 41 0.0009 35.6 13.0 65 56-135 119-185 (493)
222 TIGR00792 gph sugar (Glycoside 76.6 2.9 6.2E-05 42.3 4.0 83 285-382 40-128 (437)
223 KOG3098 Uncharacterized conser 75.6 1E+02 0.0022 32.5 15.1 80 299-384 301-384 (461)
224 TIGR00805 oat sodium-independe 74.3 2 4.3E-05 46.9 2.2 115 287-404 75-221 (633)
225 KOG2504 Monocarboxylate transp 72.1 9.3 0.0002 40.6 6.6 75 289-383 90-165 (509)
226 PF02487 CLN3: CLN3 protein; 72.1 79 0.0017 32.7 13.1 45 352-398 334-378 (402)
227 KOG4112 Signal peptidase subun 69.5 8.5 0.00018 31.3 4.2 42 53-95 4-45 (101)
228 PF03219 TLC: TLC ATP/ADP tran 67.3 1.8E+02 0.0038 31.0 15.2 34 58-91 165-198 (491)
229 PRK11462 putative transporter; 64.9 14 0.00031 38.3 6.2 74 294-382 59-137 (460)
230 PF05631 DUF791: Protein of un 63.2 49 0.0011 33.6 9.3 81 281-383 71-151 (354)
231 PRK10429 melibiose:sodium symp 62.1 26 0.00056 36.4 7.5 38 286-323 48-90 (473)
232 KOG2532 Permease of the major 61.3 18 0.00038 38.1 6.1 92 289-400 82-173 (466)
233 TIGR00926 2A1704 Peptide:H+ sy 61.2 2.2E+02 0.0048 31.3 14.7 93 37-137 85-180 (654)
234 COG0477 ProP Permeases of the 60.9 20 0.00044 32.4 5.8 97 283-398 42-138 (338)
235 KOG2601 Iron transporter [Inor 60.1 6.1 0.00013 40.5 2.3 60 37-103 393-452 (503)
236 COG2270 Permeases of the major 59.5 67 0.0015 33.5 9.7 78 289-383 67-145 (438)
237 PF11700 ATG22: Vacuole efflux 58.8 9.3 0.0002 40.3 3.5 78 49-142 392-470 (477)
238 PF06645 SPC12: Microsomal sig 58.3 15 0.00033 28.6 3.8 55 70-145 5-59 (76)
239 PRK09669 putative symporter Ya 57.3 7.5 0.00016 39.8 2.5 81 285-380 50-135 (444)
240 KOG3098 Uncharacterized conser 55.9 25 0.00055 36.9 6.1 90 292-402 62-153 (461)
241 PRK09848 glucuronide transport 54.7 36 0.00077 34.8 7.0 81 286-380 50-135 (448)
242 KOG2533 Permease of the major 52.2 52 0.0011 34.9 7.8 52 352-405 133-184 (495)
243 COG2807 CynX Cyanate permease 51.3 98 0.0021 31.8 9.1 77 286-383 249-326 (395)
244 PF03092 BT1: BT1 family; Int 48.9 19 0.00042 37.2 3.9 88 48-142 329-416 (433)
245 COG3104 PTR2 Dipeptide/tripept 47.5 1.1E+02 0.0024 32.5 9.2 125 227-383 19-147 (498)
246 PF05631 DUF791: Protein of un 45.6 3.4E+02 0.0075 27.6 12.3 41 216-257 232-272 (354)
247 PF00854 PTR2: POT family; In 44.1 61 0.0013 32.4 6.6 89 34-137 30-121 (372)
248 PF12832 MFS_1_like: MFS_1 lik 38.0 1.7E+02 0.0036 22.6 6.8 27 288-314 43-69 (77)
249 PF13347 MFS_2: MFS/sugar tran 37.7 16 0.00034 37.3 1.2 83 289-384 46-134 (428)
250 KOG4812 Golgi-associated prote 35.5 70 0.0015 30.6 4.9 29 230-258 163-191 (262)
251 PF06963 FPN1: Ferroportin1 (F 32.3 40 0.00088 35.1 3.2 47 41-95 367-414 (432)
252 PF01306 LacY_symp: LacY proto 29.8 1.9E+02 0.0042 29.9 7.6 74 229-317 7-82 (412)
253 TIGR00939 2a57 Equilibrative N 28.8 2.9E+02 0.0063 28.7 8.9 84 286-382 51-135 (437)
254 KOG2816 Predicted transporter 26.1 2.5E+02 0.0054 29.5 7.8 124 229-385 21-144 (463)
255 PTZ00207 hypothetical protein; 25.6 1.1E+02 0.0024 33.3 5.1 32 56-88 139-170 (591)
256 PF08229 SHR3_chaperone: ER me 24.8 5.6E+02 0.012 23.8 8.9 92 218-330 48-150 (196)
257 KOG2563 Permease of the major 23.5 2.8E+02 0.006 29.4 7.3 65 236-320 55-119 (480)
258 KOG0252 Inorganic phosphate tr 23.1 83 0.0018 33.4 3.4 73 298-383 102-174 (538)
259 PF13630 SdpI: SdpI/YhfL prote 21.7 3.5E+02 0.0075 20.2 6.9 35 271-305 19-53 (76)
260 COG5487 Small integral membran 20.5 1.4E+02 0.003 21.6 3.1 20 116-135 30-49 (54)
261 PF11628 TCR_zetazeta: T-cell 20.4 40 0.00088 22.0 0.4 26 118-143 3-28 (33)
No 1
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=100.00 E-value=1e-66 Score=539.44 Aligned_cols=345 Identities=46% Similarity=0.854 Sum_probs=297.0
Q ss_pred eEehhhhhchhhHhhhccCCccccccCCCCccchhhhhHHHHHHhhhccccchhhHHHHHhcCCCchhh--hhHHHHHHH
Q 015467 3 SVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQR--NSANAIFCS 80 (406)
Q Consensus 3 ~i~l~li~~~~~ig~~lgd~~~~~~~~~g~~~~~I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq--~~a~a~~s~ 80 (406)
+++++++++++++++.++|..+ .+.+.+++++++++++++|++.|++|.|+||++.|++|++|| +.|++|+++
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~-----~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHhCchhhhhcccccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 3577899999999988887543 234678889999999999999999999999999999999876 479999999
Q ss_pred HHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCC
Q 015467 81 WMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLD 160 (406)
Q Consensus 81 ~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~ 160 (406)
+.++|+++||++|++.+|.+++|+.++++++++|+++|.+|.++++++++|+++|++++||+|+.++++... ++
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~-~~----- 233 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN-SE----- 233 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-hh-----
Confidence 999999999999998556777898888889999999999999999999999999999999998643321100 00
Q ss_pred CcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHH
Q 015467 161 DPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL 240 (406)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ff 240 (406)
.+++ ++ .+..+.++++++++++|||+||++|++|||
T Consensus 234 ----------------------------------------~~~~--~~--~~~~~~~~~i~~~~~~mP~~m~~l~~vqff 269 (477)
T TIGR01301 234 ----------------------------------------AAPP--SK--HGEEAFFGELFGAFKYLPRPVWILLLVTCL 269 (477)
T ss_pred ----------------------------------------cccc--cc--cchhhhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 0000 00 112356899999999999999999999999
Q ss_pred HHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC-chHHHHHHHHH
Q 015467 241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAISNFI 319 (406)
Q Consensus 241 sW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig-~k~~~~~s~~~ 319 (406)
+|+|||||++|+||||||+||+++|++ .++||||||+|+|++++|++++.++|+++|+++|++| +|++|.+||++
T Consensus 270 sW~a~f~~~~y~T~~vg~~v~~~~~~~----~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~ 345 (477)
T TIGR01301 270 NWIAWFPFILFDTDWMGREVYGGSVNQ----GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNII 345 (477)
T ss_pred HHHHHHHHHHhccHHHHHHHcCCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 999999999999999999999998764 3689999999999999999999999999999999998 58999999999
Q ss_pred HHHHHHHHHHHHhhhhcc-cCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhh
Q 015467 320 VFACMATTAIISVISVRE-YSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNL 398 (406)
Q Consensus 320 fai~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~ 398 (406)
+++||+++.+++.++.+. +.++....++|+.+.++.++++++++||+||+++|+||+|++++++++++++|+|||+||+
T Consensus 346 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~ 425 (477)
T TIGR01301 346 LAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNL 425 (477)
T ss_pred HHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHH
Confidence 999999999988543322 2344445566777778999999999999999999999999999999778999999999999
Q ss_pred hhhccccC
Q 015467 399 AIVIPQVS 406 (406)
Q Consensus 399 ~i~lpQi~ 406 (406)
+||+||++
T Consensus 426 ~I~lpQii 433 (477)
T TIGR01301 426 AIVIPQII 433 (477)
T ss_pred HHHHHHHH
Confidence 99999985
No 2
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-63 Score=498.81 Aligned_cols=344 Identities=42% Similarity=0.771 Sum_probs=299.4
Q ss_pred CEeEehhhhhchhhHhhhccCCccccccCCCCccchhhhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhh-HHHHHH
Q 015467 1 MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNS-ANAIFC 79 (406)
Q Consensus 1 ~~~i~l~li~~~~~ig~~lgd~~~~~~~~~g~~~~~I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~-a~a~~s 79 (406)
++++++++|+|++|||..+||..++ ..|+++|+++++|+|+||+++|++|+|+|||+.|++.++||.+ ||++++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~-----~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERK-----PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCccc-----ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 3678999999999999999998773 3578999999999999999999999999999999999988888 999999
Q ss_pred HHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCC
Q 015467 80 SWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLL 159 (406)
Q Consensus 80 ~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~ 159 (406)
+|+++||++||++|+..+|++.++|.++++|+..|.++|.+|+..+.+..++....+...+|+|..+++.+.
T Consensus 186 ~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~-------- 257 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA-------- 257 (498)
T ss_pred HHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc--------
Confidence 999999999999998889999999999999999999999999999999999999998888888776553110
Q ss_pred CCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHH
Q 015467 160 DDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMA 239 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~f 239 (406)
+.+.+ + ...+.|++.++++||++||++|++++
T Consensus 258 -------------------------------------------~~~~~---~--~~~~~e~fG~~~~mpr~m~~L~i~~l 289 (498)
T KOG0637|consen 258 -------------------------------------------RSKSS---K--LPFLLEIFGALKVMPRPMRMLLIVTL 289 (498)
T ss_pred -------------------------------------------ccccc---C--cchHHHHhchHhhCChhHHHHHHHHH
Confidence 00000 0 12345888899999999999999999
Q ss_pred HHHHHhhhhhhhcccccceeeecCCCCCCc--hhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC-chHHHHHH
Q 015467 240 LTWLSWFPFFLFDTDWMGREVYHGDPKGND--HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAIS 316 (406)
Q Consensus 240 fsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~--~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig-~k~~~~~s 316 (406)
++|+|||+|++|+||||||+||+|||++++ ++.+.||+|||+|||||++|++++.++|+.++++.+|+| +|+.|..+
T Consensus 290 ltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~ 369 (498)
T KOG0637|consen 290 LTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGV 369 (498)
T ss_pred HHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehh
Confidence 999999999999999999999999999864 779999999999999999999999999999999999999 66677777
Q ss_pred H-HHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehh
Q 015467 317 N-FIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGV 395 (406)
Q Consensus 317 ~-~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgl 395 (406)
+ +..++|+.++...+++.....+... ...+|.+..++.++.+....|++||+++|+||++-+....++++++|+++|+
T Consensus 370 ~~f~~~~~~~gl~~~~~~~~~~~~~~G-~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gv 448 (498)
T KOG0637|consen 370 NAFGLATGLAGLVLNTYVVLSHRSTAG-ILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGV 448 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhcc-eeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeee
Confidence 7 6777777776666554333222111 3345777788999999999999999999999999998888889999999999
Q ss_pred hhhhhhccccC
Q 015467 396 LNLAIVIPQVS 406 (406)
Q Consensus 396 lN~~i~lpQi~ 406 (406)
+|++|++||+|
T Consensus 449 ln~~I~ipQvi 459 (498)
T KOG0637|consen 449 LNCAIVIPQVL 459 (498)
T ss_pred eeeeeeehhhe
Confidence 99999999986
No 3
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=2e-19 Score=183.95 Aligned_cols=281 Identities=20% Similarity=0.261 Sum_probs=205.2
Q ss_pred ccCCccccccCCCCccchhhhh----------------------------HHHHHHhhhccccchhhHHHHHhcCCCc-h
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVF----------------------------VIGFWLLDLANNTVQGPARALLADLSGP-D 69 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~----------------------------v~g~~llD~s~n~~q~P~RAli~D~~p~-~ 69 (406)
+|..+|++++++||||+.++++ .+...++|++-+..+.|.+|++.|++++ +
T Consensus 57 ~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~ 136 (428)
T PF13347_consen 57 IGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD 136 (428)
T ss_pred EEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh
Confidence 4677899999999999887654 3344457999999999999999999986 7
Q ss_pred hhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCC
Q 015467 70 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQP 149 (406)
Q Consensus 70 qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~ 149 (406)
||.+..++.+.+..+|+.+.+.+... -+ +.++ +.. ....++..+.+.+++.+++.+++++.+||++-++.++
T Consensus 137 ~R~~l~~~~~~~~~~g~~l~~~~~~~-l~-~~~g---~~~---~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~ 208 (428)
T PF13347_consen 137 ERTRLSSWRMIFSMIGSLLASFLAPI-LV-SWFG---GGD---TSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ 208 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhh-hh-hhhc---cCc---cchHHHHHHHHHHHHHHHHhhhhhheeeecccccccc
Confidence 99999999999999999766665543 12 1221 110 0015889999999999999999999999921110000
Q ss_pred CCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCH
Q 015467 150 NHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPP 229 (406)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~ 229 (406)
.+...+++.++++.+- |
T Consensus 209 --------------------------------------------------------------~~~~~~~~~~~~~~~n-r 225 (428)
T PF13347_consen 209 --------------------------------------------------------------EKKISLRDSLRSLFRN-R 225 (428)
T ss_pred --------------------------------------------------------------ccccccccchhhhccc-c
Confidence 0011234444555543 6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
++++++..+++.|.++.....+..-|... +.+.+ + .. +.-+.+..+.+.+.+.+.+++.||+|+
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~-vl~~~-~-------------~~-~~~~~~~~~~~~v~~~~~~~l~~r~gk 289 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTY-VLGNE-G-------------LI-SIFMLIFFVASIVGSPLWGRLSKRFGK 289 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhcCc-h-------------hh-HHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 78999999999999888655443322222 22221 1 11 222346667788888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc-----
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD----- 384 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~----- 384 (406)
|+++..+.++.+++++...++.. ++.+..++...+.|+.++..+.+|++++++..+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~t 351 (428)
T PF13347_consen 290 KKVYIIGLLLAALGFLLLFFLGP------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKT 351 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHh------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhc
Confidence 99999999999888776655531 2778899999999999999999999999988753
Q ss_pred CCCCcceeehhhhhhhhccc
Q 015467 385 SGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 385 ~~~~~G~~mgllN~~i~lpQ 404 (406)
.+|+.|+++|+.+.+.-++|
T Consensus 352 g~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 352 GRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred CCCchHHHHHhhhhhhHHHH
Confidence 25778999999999887766
No 4
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.63 E-value=1.4e-14 Score=147.26 Aligned_cols=281 Identities=14% Similarity=0.106 Sum_probs=184.5
Q ss_pred ccCCccccccCCCCccchhhhhH----HHHH----------------------HhhhccccchhhHHHHHhcCCC-chhh
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVFV----IGFW----------------------LLDLANNTVQGPARALLADLSG-PDQR 71 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~v----~g~~----------------------llD~s~n~~q~P~RAli~D~~p-~~qq 71 (406)
+|..+|++++++||||+.++++. ++.. +++.+....+.|..|+..|+.+ ++||
T Consensus 55 ~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R 134 (437)
T TIGR00792 55 MGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRER 134 (437)
T ss_pred heEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHH
Confidence 36678999999999888776541 1111 1244444556799999999985 5889
Q ss_pred hhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 015467 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (406)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~ 151 (406)
.+++++...+..+|+.++..+... ....++-. +. ....|..|.+.+++.+++.++....+||++.. ++.+
T Consensus 135 ~~~~~~~~~~~~~g~~l~~~~~~~--l~~~~~~~-~~-----~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~--~~~~ 204 (437)
T TIGR00792 135 ESLSTFRRFGATLGGLLVAVIVLP--LVSYFGGG-DD-----KFGWFMFALVLALIGVVSLIICFFGTKERYSE--IPKN 204 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCC-cc-----cccHHHHHHHHHHHHHHHHHHHHcCCEecCCC--CCcc
Confidence 999999999999988887665432 11111100 00 12467888888888888888878888987411 0000
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 015467 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~ 231 (406)
++ + + ..+++.++.+.+ .|++
T Consensus 205 ---------------------------------------------------~~--~---~---~~~~~~~~~l~~-~~~~ 224 (437)
T TIGR00792 205 ---------------------------------------------------IE--K---K---LSLKQIFKALFK-NDQL 224 (437)
T ss_pred ---------------------------------------------------cc--c---C---CCHHHHHHHHhC-CHHH
Confidence 00 0 0 123344444433 3677
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 015467 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~ 311 (406)
+.+++..++.|.++..+..+...|. +.+++ ++. ..+ +-+.+..+...+.+++.+++.+|+|+|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-------------~~~-~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 225 LILCLAYLFYNLAFNIKNGVQVYYF-TYVLG-DPE-------------LFS-YMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred HHHHHHHHHHHHHHHHHcchhheeE-eeecC-ChH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 8899999999998887655433333 32332 211 112 2234456777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc-----CC
Q 015467 312 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD-----SG 386 (406)
Q Consensus 312 ~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~-----~~ 386 (406)
++.++.++.+++++...+.. ++.+...+.+.+.|+.++..+.++++++++..+. .+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (437)
T TIGR00792 289 LFAGGILLMVLGYLIFFFAG-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGV 349 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Confidence 99999887776655433321 1445566777888999999999999999876531 24
Q ss_pred CCcceeehhhhhhhhccc
Q 015467 387 GGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 387 ~~~G~~mgllN~~i~lpQ 404 (406)
|..|..+|+.|.+..+++
T Consensus 350 ~~~G~~~~~~~~~~~~g~ 367 (437)
T TIGR00792 350 RAEGLVYSVRTFVRKLGQ 367 (437)
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 668999999998877665
No 5
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.58 E-value=1.5e-13 Score=142.85 Aligned_cols=285 Identities=12% Similarity=0.105 Sum_probs=182.8
Q ss_pred ccCCccccccCCCCccchhhhh----HHH----------------------HHHhhhccccchhhHHHHHhcCCC-chhh
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVF----VIG----------------------FWLLDLANNTVQGPARALLADLSG-PDQR 71 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~----v~g----------------------~~llD~s~n~~q~P~RAli~D~~p-~~qq 71 (406)
+|..+|++++++||||+.++++ +++ ..+++++-.....|..|++.|+++ ++||
T Consensus 62 ~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR 141 (473)
T PRK10429 62 MGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRER 141 (473)
T ss_pred heeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHH
Confidence 4677899999999988766543 111 112345556678899999999995 6899
Q ss_pred hhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 015467 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (406)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~ 151 (406)
.+.+++...+..+|+.++..+... .-..++.... ...++....+.+++.+++.++++..+||++.++....
T Consensus 142 ~~l~~~~~~~~~ig~~~~~~~~~~--~~~~~g~~~~------~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~- 212 (473)
T PRK10429 142 EQLVPYPRFFASLAGFVTAGFTLP--FVNYVGGGDR------GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVS- 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCCch------hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccc-
Confidence 999999888888887776544321 0011111000 0125677777777888888888888899742211100
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 015467 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~ 231 (406)
++ + ....+++.++.+++- |++
T Consensus 213 ---------------------------------------------------~~--~-----~~~~~~~~~~~~~~n-~~~ 233 (473)
T PRK10429 213 ---------------------------------------------------AE--G-----SHLTLKDIVALIYKN-DQL 233 (473)
T ss_pred ---------------------------------------------------cc--c-----cCCCHHHHHHHHhcC-HHH
Confidence 00 0 012366777766554 889
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 015467 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~ 311 (406)
++++...++.|++......+...|+.. + .++++ ..+ +.+.+.++...+..++.+++.||+|+|+
T Consensus 234 ~~ll~~~~~~~~~~~~~~~~~~y~~~y-~-~~~~~-------------~~~-~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 234 SCLLGMALAYNIASNIINGFAIYYFTY-V-IGDAD-------------LFP-YYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeEEEE-E-CCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 999999999998887766665533322 2 22321 112 3334455666777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc-----CC
Q 015467 312 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD-----SG 386 (406)
Q Consensus 312 ~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~-----~~ 386 (406)
++.++.++..++.....+..+.. + .+.+..++...+.|+..+..+..|++++++..+. ..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~-------------~--~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~ 362 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAA-------------P--HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGI 362 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-------------c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCc
Confidence 99988876655544333221110 1 1445556666778999999999999999987542 35
Q ss_pred CCcceeehhhhhhhhc
Q 015467 387 GGQGLAIGVLNLAIVI 402 (406)
Q Consensus 387 ~~~G~~mgllN~~i~l 402 (406)
|..|++.|..+.+.-+
T Consensus 363 R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 363 RCESIAYSVQTMVVKG 378 (473)
T ss_pred cchhHHHHHHHHHHHH
Confidence 6678888887765443
No 6
>PRK09669 putative symporter YagG; Provisional
Probab=99.47 E-value=1.8e-12 Score=133.29 Aligned_cols=275 Identities=13% Similarity=0.097 Sum_probs=167.6
Q ss_pred ccCCccccccCCCCccchhhhh----H----HHH------------------HHhhhccccchhhHHHHHhcCCC-chhh
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVF----V----IGF------------------WLLDLANNTVQGPARALLADLSG-PDQR 71 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~----v----~g~------------------~llD~s~n~~q~P~RAli~D~~p-~~qq 71 (406)
+|..+|++++++||||+.++.+ . +.+ .+++.+-.....|..|+..|+.+ ++||
T Consensus 65 ~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR 144 (444)
T PRK09669 65 MGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRER 144 (444)
T ss_pred eeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHH
Confidence 4667889999999988776432 1 111 12233455688899999999985 4788
Q ss_pred hhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 015467 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (406)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~ 151 (406)
.+.+++......+|+.++..++.. +-..++.- +. ....+..+.+.+++.+++.++++...||++.++ + +
T Consensus 145 ~~l~~~r~~~~~~G~~i~~~~~~p--l~~~~~~~-~~-----~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~--~ 213 (444)
T PRK09669 145 HSLQSWRFALSFIGGLIVSVIALP--LVDILGKG-DE-----QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE-V--D 213 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCC-ch-----hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC-C--c
Confidence 889999999999998888765421 11111100 00 013455666666666666666677788863211 0 0
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 015467 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~ 231 (406)
++ ......++++++ .|++
T Consensus 214 -------------------------------------------------------~~--~~~~~~~~~~~~-----n~~~ 231 (444)
T PRK09669 214 -------------------------------------------------------NS--SSVWKDLKLLLG-----NSQW 231 (444)
T ss_pred -------------------------------------------------------CC--CCHHHHHHHHhC-----CchH
Confidence 00 001122333332 2568
Q ss_pred HHHHHHHHHHHHHhhhh---hhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 232 HVVLIVMALTWLSWFPF---FLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~---~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.+++..++.+.+.... ..|+..|+ . ++++ .+..-+....+.+.+...+.+++.+|+|
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~y~~~~~----~-~~~~--------------~~~~~~~~~~i~~ii~~~~~~~l~~r~g 292 (444)
T PRK09669 232 RIMFIFNVVLLTAVVTRGGATLYYVNYV----L-LRPD--------------LATLFLVTGMIAGLFGALLSERLLGKFD 292 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeee----c-CCHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88899998888887433 33333222 2 1211 1122233444555566667789999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc----
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD---- 384 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~---- 384 (406)
+|+.+.++.++.+++.....+.. + ++.+..++.+.+.|+..+....+|.+++++..+.
T Consensus 293 k~~~~~~~~~~~~~~~~~~~~~~----------------~--~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~ 354 (444)
T PRK09669 293 RVRAFKWTIVAFVILSALIFFIP----------------P--SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKR 354 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC----------------c--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 99999988776654332222211 1 1556667777889999999999999999977542
Q ss_pred -CCCCcceeehhhhhhhhcc
Q 015467 385 -SGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 385 -~~~~~G~~mgllN~~i~lp 403 (406)
.+|..|+..|+.+.+.-++
T Consensus 355 ~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 355 SGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred cCcCcchHHHHHHHHHHHHH
Confidence 2445677778776655443
No 7
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.44 E-value=4.3e-12 Score=130.82 Aligned_cols=275 Identities=14% Similarity=0.165 Sum_probs=182.0
Q ss_pred cCCccccccCCCCccchhhhh--------------------------HHHHHHhhhccccchhhHHHHHhcCCCc-hhhh
Q 015467 20 GDTKEHCSKFRGTRTRAAFVF--------------------------VIGFWLLDLANNTVQGPARALLADLSGP-DQRN 72 (406)
Q Consensus 20 gd~~~~~~~~~g~~~~~I~~~--------------------------v~g~~llD~s~n~~q~P~RAli~D~~p~-~qq~ 72 (406)
|--.|+.+.+|||+||.++.+ -+-..+++++-..+..|.-|+..-++++ +||.
T Consensus 69 G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~ 148 (467)
T COG2211 69 GFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERA 148 (467)
T ss_pred eeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHH
Confidence 444678888899999887765 1223334556667888999999999986 7899
Q ss_pred hHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCC
Q 015467 73 SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHL 152 (406)
Q Consensus 73 ~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~ 152 (406)
+-++|...+.++|+.+...+-.. +-+.++ .+.. ...++..-.+-.++.++..+++...+||++.+..+.+.
T Consensus 149 ~l~s~R~~~~~~g~~l~~~~~~p--lv~~~g--~~~~----~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~- 219 (467)
T COG2211 149 SLTSWRMVFASLGGLLVAVLFPP--LVKLFG--GGDK----ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT- 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHhC--CCcc----hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc-
Confidence 99999999999998886655321 112211 1100 11345555555556666677777789998653221110
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHHH
Q 015467 153 TDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMH 232 (406)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~ 232 (406)
+.+......+..+++. |+++
T Consensus 220 -------------------------------------------------------~~~~~~~~~~~~~~~N-----rp~~ 239 (467)
T COG2211 220 -------------------------------------------------------GVKLKLKDSFLLIFKN-----RPLL 239 (467)
T ss_pred -------------------------------------------------------cccccHHHHHHHHHcc-----chHH
Confidence 0001111223344444 7888
Q ss_pred HHHHHHHHHHHHhhhh---hhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 233 VVLIVMALTWLSWFPF---FLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 233 ~l~~v~ffsW~g~f~~---~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
.+|+..+|.|.+..-. ..|+.+|+ -|+++ ....+.+.......++...+.|++.+|+|+
T Consensus 240 ~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~-------------l~~~~~~~~~~~~~l~~~~~~p~L~~~~gk 301 (467)
T COG2211 240 LLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPE-------------LFAYLLLLASGAGLLIGLILWPRLVKKFGK 301 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChH-------------HHHHHHHHHHHHHHHHHHHhHHHHHHHhch
Confidence 8999999999998744 34444332 12332 333455666666666667889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccc-----c
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA-----D 384 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~-----~ 384 (406)
|++|.++.++.+++.++..+.. .++.+..++...+.|+..+..+.+|++++++..+ .
T Consensus 302 k~~~~~~~~~~~i~~~~~~f~~------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~T 363 (467)
T COG2211 302 KKLFLIGLLLLAVGYLLLYFTP------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKT 363 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHh
Confidence 9999999998887766555543 1256777777788899999999999999997653 2
Q ss_pred CCCCcceeehhhhhh
Q 015467 385 SGGGQGLAIGVLNLA 399 (406)
Q Consensus 385 ~~~~~G~~mgllN~~ 399 (406)
..|..|+.-|+.+.+
T Consensus 364 G~R~eGi~~s~~tF~ 378 (467)
T COG2211 364 GVRREGIVYSGMTFF 378 (467)
T ss_pred CCCchhhHHHHHHHH
Confidence 366778777765543
No 8
>PRK11462 putative transporter; Provisional
Probab=99.39 E-value=2.5e-11 Score=126.13 Aligned_cols=270 Identities=13% Similarity=0.107 Sum_probs=161.8
Q ss_pred ccCCccccccCCCCccchhhhh--------------------------HHHHHHhhhccccchhhHHHHHhcCCCc-hhh
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVF--------------------------VIGFWLLDLANNTVQGPARALLADLSGP-DQR 71 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~--------------------------v~g~~llD~s~n~~q~P~RAli~D~~p~-~qq 71 (406)
+|..+|++++++|||||.|+++ .+...+++.+--....|..|+..+++++ +||
T Consensus 65 ~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eR 144 (460)
T PRK11462 65 MGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQR 144 (460)
T ss_pred heehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHH
Confidence 4677899999999998887654 1122224566667788999999999985 889
Q ss_pred hhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 015467 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (406)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~ 151 (406)
.+..++.+....+|+.++.++... +-+.++ +.. -....+....+.+++.+++..+.....||++..+++
T Consensus 145 t~l~s~r~~~~~iG~~~~~~~~~p--lv~~~g---~~~---~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~--- 213 (460)
T PRK11462 145 ISLQSWRFVLATAGGMLSTVLMMP--LVNLIG---GDN---KPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT--- 213 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CCc---hhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc---
Confidence 999999999999888887666432 111111 100 001234455555556666666666667886321100
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 015467 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~ 231 (406)
+ ..+++.++...+ .|++
T Consensus 214 -----------------------------------------------------------~---~~~~~~l~~~~~-Nk~~ 230 (460)
T PRK11462 214 -----------------------------------------------------------T---TSMREDLRDIWQ-NDQW 230 (460)
T ss_pred -----------------------------------------------------------C---CCHHHHHHHHhC-ChHH
Confidence 0 013333444332 4678
Q ss_pred HHHHHHHHHHHHHhh---hhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 232 HVVLIVMALTWLSWF---PFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f---~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.++...++.+++.. ....|+..|+. ++++ ..+.-+..+.+.+++...+.+++.+|++
T Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~y~~~y~~-----g~~~--------------~~~~~l~~~~i~~iig~~l~~~l~~r~g 291 (460)
T PRK11462 231 RIVGLLTIFNILAVCVRGGAMMYYVTWIL-----GTPE--------------VFVAFLTTYCVGNLIGSALAKPLTDWKC 291 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhhhhhhc-----CChH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888777776666643 44444444432 2221 1123355666667777788899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc----
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD---- 384 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~---- 384 (406)
+|+++..+.++.++......+.. . .+....+++..+.|+..+....+|++++++..+.
T Consensus 292 kk~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~ 353 (460)
T PRK11462 292 KVTIFWWTNALLAVISLAMFFVP-----------------M-QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC 353 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc-----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh
Confidence 99987655443332222211111 0 0223334455667888888889999999876542
Q ss_pred -CCCCcceeehhhhhh
Q 015467 385 -SGGGQGLAIGVLNLA 399 (406)
Q Consensus 385 -~~~~~G~~mgllN~~ 399 (406)
..|+.|+..+..+.+
T Consensus 354 tG~r~~g~~~a~~~f~ 369 (460)
T PRK11462 354 NGKRLTGISFAGTLFV 369 (460)
T ss_pred cCCCchHHHHHHHHHH
Confidence 255667766665443
No 9
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.35 E-value=2.8e-11 Score=120.05 Aligned_cols=259 Identities=9% Similarity=-0.012 Sum_probs=152.0
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
.......+..|++.|..|+++|.+++++.+....+|.++|..++.. +...++ .... ...--|..|.+.++..+
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~--l~~~~g---~~~~--~~~~wr~~f~i~ai~~l 168 (356)
T TIGR00901 96 FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV--LASPEF---ANTG--LITLWGYIFFWTALLIL 168 (356)
T ss_pred HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH--Hhhhcc---cccc--cccccHHHHHHHHHHHH
Confidence 3334456788999999999999999999999999999998887753 111111 0000 00116889999988888
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCC
Q 015467 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (406)
++.++.++..||++-.++++ ++ + .
T Consensus 169 ~~~~~~~~~~~e~~~~~~~~-----------------------------------------------------~~--~-~ 192 (356)
T TIGR00901 169 PGLLVTLFLAKEPQEDASVP-----------------------------------------------------KP--L-T 192 (356)
T ss_pred HHHHHHHHhccCCCcccccc-----------------------------------------------------hh--H-H
Confidence 87777665667742100000 00 0 0
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHH
Q 015467 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (406)
Q Consensus 210 ~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~ 289 (406)
+.....++++++. +.+ +.++.+.+..++.+.++.....+.+.|+-+ ++-+++ +.|......-
T Consensus 193 -~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~~-------------~~g~~~~~~~ 254 (356)
T TIGR00901 193 -QAVLKPIREFFQR-KNM-IQALLLLLLIVLYKLGDSAATVLTTLFLLD--MGFSKE-------------EIALVAKING 254 (356)
T ss_pred -HHHHHHHHHHHHh-cCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH-------------HHHHHhHHHH
Confidence 0001123333332 111 246666666666777777777677766644 332321 2333322222
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHH
Q 015467 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 369 (406)
Q Consensus 290 siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~ 369 (406)
.+...+..++.+++.+|+|+|+...++.++.+++.....+... +.... + .++ .+.+.......+.|+..+.
T Consensus 255 ~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~---~-~~~--~~~~~~~~~~~l~~~~~~~ 325 (356)
T TIGR00901 255 LLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS---NGHHD---G-ITF--PHLLMLFLTITLEAVTGGL 325 (356)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh---cCccc---c-ccc--chHHHHHHHHHHHHHHhHH
Confidence 2344566677789999999988877776666554443332210 00000 0 001 1345555566667888888
Q ss_pred HhhchhhhhhcccccCCCCcceeehhhhhhh
Q 015467 370 TYSVPFAITAELTADSGGGQGLAIGVLNLAI 400 (406)
Q Consensus 370 ~~siPfaLl~~~~~~~~~~~G~~mgllN~~i 400 (406)
.+..-.+++.+..+ ++..|.++|+.++..
T Consensus 326 ~~~~~~~~~~~~~p--~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 326 GTVAFVAFLSKLSN--PKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHhcC--CCccHHHHHHHHHHH
Confidence 88888888888766 467899999988764
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=6.9e-11 Score=115.81 Aligned_cols=247 Identities=13% Similarity=0.067 Sum_probs=154.7
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
.++......+..+++.|..|+++|.+++++.+...++|.++|..+++. +.+.. ..|..|.+.++.
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~--l~~~~-------------g~~~~~~~~~~~ 167 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL--MYATL-------------GIKWAIWVDAVG 167 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HHHHh-------------hHHHHHHHHHHH
Confidence 345555667788999999999999999999999999999999988765 11111 246677766655
Q ss_pred HHHHhhhee-eEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccC
Q 015467 128 LTLCALVTI-YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (406)
Q Consensus 128 l~~~~~~Tl-~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
.+++.+... +..||++. ++..+ .+
T Consensus 168 ~~~~~~~~~~~~~~~~~~--~~~~~---------------------------------------------------~~-- 192 (365)
T TIGR00900 168 FAISALLIVSVRIPELAA--SEIQA---------------------------------------------------LS-- 192 (365)
T ss_pred HHHHHHHHHhcccccCCC--ccccc---------------------------------------------------cc--
Confidence 555443322 22222210 00000 00
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhh-hhcccccceeeecCCCCCCchhhHhHHhhhHHHHHH
Q 015467 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFF-LFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (406)
Q Consensus 207 ~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~-~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~g 285 (406)
+ ......++-++.+++ .+.++.+++..++.+..+..+. .+.+.|..+ +++.++. ..| +-
T Consensus 193 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~-~~ 252 (365)
T TIGR00900 193 N----AVLRDTREGIKFVLK-NPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-YLGRGST-------------HYG-WV 252 (365)
T ss_pred h----hHHHHHHhHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCchH-------------HHH-HH
Confidence 0 000111122222222 3567788888887777776666 344443332 3332221 222 33
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
+..+++...+.+++.+++.||+++|++..++.++.+++++...+.. + +.+..++...+.|+
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~~~~~g~ 313 (365)
T TIGR00900 253 LAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP----------------P---NFPLFLVLWFAIGV 313 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc----------------h---hHHHHHHHHHHHHH
Confidence 5556667777888889999999999998888776666554333321 0 24566777888899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
.++.......+++.+..++ +..|..+|+.|....+++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 314 GYGPINVPQGTLLQRRVPA--ELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred HHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHH
Confidence 9999888888998887763 5678889999888776653
No 11
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=5e-10 Score=115.27 Aligned_cols=143 Identities=17% Similarity=0.108 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|.++.++++.++.+.++..+......|. +++++. ++ ..+.+.+....+...+.+.+.+++.+|+|
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~~-------------~~~~~~~~~~~~~~~~~~~l~~~l~~r~g 292 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYV-RYVLND-TG-------------LFTVLVLVQNLVGTVASAPLVPGMVARIG 292 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeE-eeecCC-hH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5678889999999988888766544444 445542 21 12233333334445667778899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc----
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD---- 384 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~---- 384 (406)
.|+++.++.++.++++....+.. ..+.+..++...+.|+..+..+..+.+++++..+.
T Consensus 293 ~~~~~~~g~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 293 KKNTFLIGALLGTCGYLLFFWVS------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 99999999887776554333211 01445555566778888888899999998876542
Q ss_pred -CCCCcceeehhhhhhhhccc
Q 015467 385 -SGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 385 -~~~~~G~~mgllN~~i~lpQ 404 (406)
..|..|.++|+.|.+.-+++
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred hCccchhHHHHHHHHHHHHHH
Confidence 13567999999998766554
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.14 E-value=1.1e-09 Score=110.45 Aligned_cols=245 Identities=14% Similarity=0.075 Sum_probs=149.8
Q ss_pred hhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHH
Q 015467 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai 126 (406)
.-++......+..+++.|..|+++|.+++++......+|+.++..++.. +.+. .+.+..|.+.++
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~ 177 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL--AAGD-------------AAWRHIFYVGGV 177 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hccc-------------cCHHHHHHHHHH
Confidence 3456666677889999999999999999999999999999999888753 1111 135677777666
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccC
Q 015467 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (406)
Q Consensus 127 ~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
+.++...+.....||+|....+... ++
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~~~---------------------------------------------------~~-- 204 (406)
T PRK11551 178 GPLLLVPLLMRWLPESRAFAQAAGA---------------------------------------------------GK-- 204 (406)
T ss_pred HHHHHHHHHHHhCCCChhHHhccCc---------------------------------------------------ch--
Confidence 6555555555667886422111000 00
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHH
Q 015467 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL 286 (406)
+ .....+.+++.. + .+..+.+++..++....++.+..|...|+.+ ++-++. .. .+..
T Consensus 205 ~-----~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~~-~~~~ 261 (406)
T PRK11551 205 Q-----RAPVLRALFGEG-R-ATATLLLWISYFFTLIVLYFLLNWLPSLLVG--QGLSRS-------------QA-GLVQ 261 (406)
T ss_pred h-----hhhhHHHHhhhh-h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCChh-------------hh-hHHH
Confidence 0 000111222110 0 1223455556666666666665555555543 222221 11 2334
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhH
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 366 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~ 366 (406)
..+++...+.+++..++.+|+|+|++..++.+..++++....+.. +.+...+...+.|+.
T Consensus 262 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 262 IAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--------------------SFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--------------------cHHHHHHHHHHHHHH
Confidence 556667778888899999999999988776555444433222111 345555667778888
Q ss_pred HHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 367 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 367 wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
++..+.+.++++.+..++ +..|..+|+.|....+++
T Consensus 322 ~~~~~~~~~~~~~~~~p~--~~~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPT--QVRGTGVGAAVAVGRLGS 357 (406)
T ss_pred HHhHHHHHHHHHHHHcch--hhhhhhhhHHHHhhhHHH
Confidence 888888888988888763 456777787777665543
No 13
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.09 E-value=3.3e-09 Score=105.38 Aligned_cols=241 Identities=12% Similarity=0.107 Sum_probs=149.0
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++......+..+++.|..|+++|.+++++.+....+|..+|..+++. +.+.. ..|..|.+.+++
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~-------------~~~~~~~~~~~~ 168 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY--ILVWL-------------SWHAIFAFLSLA 168 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHc-------------CHHHHHHHHHHH
Confidence 355556677888999999999999999999999999999999888764 11111 246777776666
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCC
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (406)
.+++.+......||.+..+++ . + .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~--~---------------------------------------------------~---~ 192 (385)
T TIGR00710 169 GILLSALIFFILPETLPYEAR--I---------------------------------------------------Q---I 192 (385)
T ss_pred HHHHHHHHHHhCCCCCCCccc--C---------------------------------------------------C---H
Confidence 666655555566765311100 0 0 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHH
Q 015467 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (406)
Q Consensus 208 ~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~ 287 (406)
+.....++++++ .+.++.+.+..++.+.+++.+..+...+..+ .++.++. ..| +-+.
T Consensus 193 ---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~g-~~~~ 249 (385)
T TIGR00710 193 ---STYFETFLLLLK-----SKMFWGYALIYGASFGGFFAFFSGAPFVYID-IMGVSPS-------------VFG-LLFA 249 (385)
T ss_pred ---HHHHHHHHHHHc-----CchhHHHHHHHHHHHHHHHHHHHcChHHHHH-HcCCCHH-------------HHH-HHHH
Confidence 000112222222 2456667777777888887777666555433 3333321 122 2234
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 367 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~w 367 (406)
.+.+...+..++..++.+|+++|+....+.++.+++.....+.... .............+.|+.+
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~~~ 314 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL---------------GLGSWAMIIGPMMFVGIGN 314 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh---------------ccchHHHHHHHHHHHHHHH
Confidence 4566677778888999999999998888877666554433332210 0002334455566788888
Q ss_pred HHHhhchhhhhhcccccCCCCcceeehhhhhhh
Q 015467 368 AITYSVPFAITAELTADSGGGQGLAIGVLNLAI 400 (406)
Q Consensus 368 A~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i 400 (406)
+.......+...+..+ +..|..+|+.|...
T Consensus 315 ~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~ 344 (385)
T TIGR00710 315 SMISSIAMAYALEDFP---HVAGTASALFGTLR 344 (385)
T ss_pred HHHHHHHHHHHhccCc---ccchHHHHHHHHHH
Confidence 8877777776665443 45688888888654
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.08 E-value=2.2e-09 Score=105.48 Aligned_cols=268 Identities=14% Similarity=0.071 Sum_probs=150.0
Q ss_pred hhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHH
Q 015467 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai 126 (406)
.-++......+..+++.|..|+++|.+++++.....++|.++|..+++. ..+. ...|..|.+.++
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~~~~ 156 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGW--ILIH-------------FSWQWAFIIEGV 156 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHH--HHHh-------------CCchHHHHHHHH
Confidence 3455566677888999999999999999999999999999999887753 1111 125778887777
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccC
Q 015467 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (406)
Q Consensus 127 ~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
+.++..++.....||+|.++....+.++ + ..+.+.. .+ ...+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~----------------~~--------~~~~~~- 200 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPPQKAKWLTEEEK----------Y-IVVGGLL----------------AE--------QQGKGP- 200 (399)
T ss_pred HHHHHHHHhhheecCCCCccccCCHHHH----------h-hcchhhc----------------cc--------cccccc-
Confidence 7666666666677776532221110000 0 0000000 00 000000
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHH
Q 015467 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL 286 (406)
+ +.....++++++. +.++.+++..++.+.++..+..|.+.|+.+ .++.++. .. .+-.
T Consensus 201 ~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~-~~~~ 257 (399)
T TIGR00893 201 S---TPKKYQIKELLKD-----RRVWGLALGQFLVNIGLGFFLTWFPTYLVQ-ERGLSIL-------------EA-GFMA 257 (399)
T ss_pred c---CCCccchHHHhcC-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcccHH-------------Hh-hHHH
Confidence 0 0011223343332 568888999999999999988888887765 2332221 11 2334
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchH--HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRL--VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~--~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
....+...+.+++..++.+|+++|+ +.... ....+++....+.... .+ ...+.+....+..+.+
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~ 323 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFA-TN------------YVNIPYAALALVALGF 323 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHH-hc------------cchhHHHHHHHHHHHH
Confidence 4455666777778888889988885 22111 1111111111111100 00 0013333333333333
Q ss_pred hHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 365 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
...+ .....++++++..+ ++..|..+|+.|....+++.
T Consensus 324 ~~~~-~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~g~~ 361 (399)
T TIGR00893 324 FGLG-AGAIGWALISDNAP--GNIAGLTGGLINSLGNLGGI 361 (399)
T ss_pred hchh-hhhHHHHHHHhhcC--hhHHHHHHHHHHHHHHHhhh
Confidence 3333 67778888888765 35668888888887766543
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.07 E-value=8.2e-10 Score=107.82 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=154.6
Q ss_pred hhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHH
Q 015467 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai 126 (406)
.-++.........+++.|..|+++|.+++++.+...++|.++|..+++.. .+.. ..|..|.+.++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~-------------~~~~~~~~~~~ 159 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFL--ISYF-------------GWRWAFLISAI 159 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHC-------------HHCCHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhh--hhcc-------------ccccccccccc
Confidence 34566677888999999999999999999999999999999998888652 1111 25667788777
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccC
Q 015467 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (406)
Q Consensus 127 ~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
+.+++.++.....+|+|.++.++++.+++ .+.
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~-- 191 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE----------------------------------------------SKK-- 191 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT------------------------------------------------H--
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc----------------------------------------------ccc--
Confidence 77777665445555543322221110000 000
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHH
Q 015467 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL 286 (406)
++...+.++.+.+. +.++.+.+..+...+.+..+..+...|+.+ .++.+ |.....+-+
T Consensus 192 ---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-------------~~~~~~~~~ 249 (352)
T PF07690_consen 192 ---PKPLKPGFKSLFKN-----PVLWILLIAFFLFFFVFSGFSFFLPLYLQE-VLGFS-------------GPSQAGLLF 249 (352)
T ss_dssp ---HHCCCH-CTHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHCC-------------THHHHHHHH
T ss_pred ---cccccccccccccc-----chhhhhhhhhhHHHHHHHHhhcccchhhhh-ccCCC-------------HHHHHHHHH
Confidence 00000112333333 223334444444445666666666666444 34433 112222335
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhH
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 366 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~ 366 (406)
.+..+...+.+++.+++.+|+++|+...+......++..+..+... ..+....++.+.+.|+.
T Consensus 250 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 250 SIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF-----------------SSSPVWLIIALFLIGFG 312 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH-----------------HCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH-----------------hhhHHHHHHHHHHHHHH
Confidence 5556667777888899999999877766665555444333222221 01445666778889999
Q ss_pred HHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 367 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 367 wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
++..+..-.+++.+..+ ++..|..+|+.|....++.
T Consensus 313 ~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~~~ 348 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVP--PEYRGTAFGLFNSIGSLGG 348 (352)
T ss_dssp HHHHCHHHHHHHHCCCH--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHH
Confidence 99888888888888775 4678999999998776654
No 16
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.06 E-value=3.8e-09 Score=104.65 Aligned_cols=232 Identities=14% Similarity=0.107 Sum_probs=132.8
Q ss_pred cchhhHHHHHhcCCCchhhhhH--HHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 015467 53 TVQGPARALLADLSGPDQRNSA--NAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a--~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~ 130 (406)
.......+++.|..|+++|..+ +++.....++|.++|..+++. +.+.+ ..|..|.+.+++.++
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~--l~~~~-------------~~~~~f~~~~~~~~~ 167 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFW--LALGF-------------GFTVMFLTAALAFVL 167 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHH--HHHhc-------------ccHHHHHHHHHHHHH
Confidence 3333456777888877766644 566777778888888887764 11111 257888888877777
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCC
Q 015467 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (406)
Q Consensus 131 ~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
+.++.....||.|..++++. +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~--------------------------------------------------------~--- 188 (375)
T TIGR00899 168 CGVLVWLFLPSYPRGAPGAL--------------------------------------------------------T--- 188 (375)
T ss_pred HHHHHHHhCCCcccCccccc--------------------------------------------------------C---
Confidence 76666666788642111000 0
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHH
Q 015467 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (406)
Q Consensus 211 ~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~s 290 (406)
+ ..+++.+ ..+..+.+.+..++.|.+...+..+...|+-+ .++.++. ..| +.+...+
T Consensus 189 ~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~g-~~~~~~~ 245 (375)
T TIGR00899 189 R---LEVRGLL-----ASRDTRLLFVACTLMWGCNILYIINMPLLIIH-ELGLPDK-------------LAG-LMMGTAA 245 (375)
T ss_pred c---chhhhhh-----cCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHH-------------HHH-HHHHHHH
Confidence 0 0011111 12456666666777777655554444444432 2332221 112 2223334
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
+...+..++..++.+|+|+|++..++.++.++++....+.. +.+....+..+.|+..+..
T Consensus 246 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 246 GLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--------------------SLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHH
Confidence 44555667778999999999988877665544433222211 4455555666777777776
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.....+.+.+..+ ++.|..+|+.|....+++
T Consensus 306 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~ 336 (375)
T TIGR00899 306 AGIGMLYFQDLMP---GRAGAATTLYTNTGRVGW 336 (375)
T ss_pred HHHHHHHHHHhCc---chhhHHHHHHHHHHHHHH
Confidence 6666666666554 244677888887665544
No 17
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.01 E-value=8.1e-09 Score=100.06 Aligned_cols=219 Identities=20% Similarity=0.268 Sum_probs=163.9
Q ss_pred HHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHH
Q 015467 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (406)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ 124 (406)
.+.-++....+.+..+++.|..|+++|.+++++.....++|+.+|..+++. ..+. .+.|..|.+.
T Consensus 95 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-------------~~~~~~~~~~ 159 (352)
T cd06174 95 FLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGL--LAES-------------LGWRWLFLIL 159 (352)
T ss_pred HHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH-------------hhHHHHHHHH
Confidence 344677788899999999999999999999999999999999999988764 1111 1256777776
Q ss_pred HHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccc
Q 015467 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (406)
Q Consensus 125 ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (406)
+++.+++.+..+
T Consensus 160 ~~~~~~~~~~~~-------------------------------------------------------------------- 171 (352)
T cd06174 160 AILGLLLALLLL-------------------------------------------------------------------- 171 (352)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 666665554311
Q ss_pred cCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHH
Q 015467 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (406)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~ 284 (406)
.++ |.++.+++..++.+.++..+..+.+.+..+ .++.++. .. .+
T Consensus 172 -----------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~-~~ 215 (352)
T cd06174 172 -----------FLL----------RLLLLLALAFFLLSFGYYGLLTYLPLYLQE-VLGLSAA-------------EA-GL 215 (352)
T ss_pred -----------HHH----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCHH-------------HH-HH
Confidence 011 778889999999999999999999888765 3332211 12 23
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchH-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRWIGSRL-VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~ig~k~-~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
-...+.+...+.+++..++.+|+|+|+ +..++.++..+++....+.. +.+...+...+.
T Consensus 216 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~~~ 275 (352)
T cd06174 216 LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--------------------SLALLLVALLLL 275 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 345566677888888899999999999 99889888877766444332 456778888899
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+.......+++.+..++ +..|..+|+.+....+++
T Consensus 276 g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 314 (352)
T cd06174 276 GFGLGFAFPALLTLASELAPP--EARGTASGLFNTFGSLGG 314 (352)
T ss_pred HHHHhccchhHHHHHHhhcCH--HHHHHHHHHHHHHHHHHH
Confidence 999999999999999998763 566778888887766554
No 18
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.98 E-value=1.2e-08 Score=103.61 Aligned_cols=242 Identities=13% Similarity=0.046 Sum_probs=136.0
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccccc-ccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~-d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
+.........+++.|.+|++||.++|++.+....+|.++|-.+|+.. ++. .+..+.+.+.++
T Consensus 101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-----------------~~~~~~i~~~~~ 163 (393)
T PRK11195 101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-----------------AEAALAVCALIY 163 (393)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 33344455588999999999999999999999999999999988751 210 234444544444
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCC
Q 015467 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (406)
+++.+ ....+||.|.++++.+ ++
T Consensus 164 ~~~~~-~~~~l~~~~~~~~~~~--------------------------------------------------------~~ 186 (393)
T PRK11195 164 LLAAL-FNLFIPRLGARRPGQS--------------------------------------------------------WN 186 (393)
T ss_pred HHHHH-HHhcCCCCcccccccC--------------------------------------------------------CC
Confidence 43332 2345677542110000 00
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHH
Q 015467 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (406)
Q Consensus 209 ~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~ 288 (406)
. ......+++-++.+.+- +.++...+..++.|.....+.+....|+.+ .++.++. ..| +-+..
T Consensus 187 ~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lg~s~~-------------~~G-~~~~~ 249 (393)
T PRK11195 187 P-IALLRDFFHACRVLWRD-KLGRFSLAGTTLFWGAGATLRFLVLAWAPV-ALGITLN-------------QPA-YLQAV 249 (393)
T ss_pred H-HHHHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChh-------------HHH-HHHHH
Confidence 0 00000111112222222 334444455556677766665555566633 5554443 223 33556
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA 368 (406)
+++...+.+++..++.+|.++|++..++.+ .++++....+.. +.+...+...+.|+..+
T Consensus 250 ~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------------------~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 250 VAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--------------------SLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--------------------HHHHHHHHHHHHHHhhh
Confidence 666777788888999988888887777743 333222111111 44555566667788766
Q ss_pred HHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 369 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 369 ~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
..+ .|..-+.+..++++.+.|...|+.|+...+.+
T Consensus 309 ~~~-~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 309 FFV-VPMNALLQHRGHVLVGAGHSIAVQNFNENLAM 343 (393)
T ss_pred hhh-hhHHHHHHhhCcccccchhHHHHHhHHHHHHH
Confidence 655 55444444333322346888999988766543
No 19
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.97 E-value=1.3e-08 Score=106.36 Aligned_cols=258 Identities=14% Similarity=0.132 Sum_probs=165.1
Q ss_pred hhhccccchhhHHHHHhcCCCchhh--------------------------hhHHHHHHHHHHhhhhhhccccccccccc
Q 015467 47 LDLANNTVQGPARALLADLSGPDQR--------------------------NSANAIFCSWMAVGNILGFSAGASGSWHR 100 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq--------------------------~~a~a~~s~~~glG~ilGy~~g~i~d~~~ 100 (406)
-.++-+..+...-|++.|+.+++.+ .+-.++.-.+.-+|+++..+++... ...
T Consensus 136 a~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~-~~~ 214 (477)
T PF11700_consen 136 ANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL-VIS 214 (477)
T ss_pred HHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH-HHc
Confidence 3567788999999999999999877 4444444444445555544443220 000
Q ss_pred ccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCC
Q 015467 101 WFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNA 180 (406)
Q Consensus 101 ~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (406)
.+.. ..-....|+.+.++++-.++..+.+.+..||+|-++..+..
T Consensus 215 -~~~~-----~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~----------------------------- 259 (477)
T PF11700_consen 215 -PGST-----ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG----------------------------- 259 (477)
T ss_pred -CCCc-----cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-----------------------------
Confidence 0000 00013579999999999999999999999998642111100
Q ss_pred CCCCcccCccccchhhhccccccccCCCCCCCchhhHHHH---HHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccc
Q 015467 181 NGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNL---LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMG 257 (406)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg 257 (406)
+ ......++++ +|.+++.| ++.+.++..||-=-|..+...+.+.|..
T Consensus 260 --------------------------~---~~~~~g~~~l~~t~k~~~~~~-~~~~fLia~~l~~dg~~ti~~~~~i~a~ 309 (477)
T PF11700_consen 260 --------------------------S---SYLRFGFKRLWRTFKEIRKLR-QLFLFLIAYFLYSDGVNTIISFAGIYAT 309 (477)
T ss_pred --------------------------h---hHHHHHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0112334444 45555554 4555666666666688888888887776
Q ss_pred eeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch--HHHHHHHHHHHHHHHHHHHHHhhhh
Q 015467 258 REVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR--LVWAISNFIVFACMATTAIISVISV 335 (406)
Q Consensus 258 ~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k--~~~~~s~~~fai~~~~~~~i~~~~~ 335 (406)
+ +++=++. ....++++.+ +++.+.+++.+++.||+|.| ++..++.++..+.-+...+ .+..
T Consensus 310 ~-~lg~s~~-------------~l~~~~l~~~-i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~-G~~~- 372 (477)
T PF11700_consen 310 E-VLGMSTT-------------QLIVFGLVVQ-IVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF-GFWP- 372 (477)
T ss_pred H-hcCcCHH-------------HHHHHHHHHH-HHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH-Hhhh-
Confidence 5 4443322 3444555444 57888899999999999999 7777776655322222222 1110
Q ss_pred cccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 336 REYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
+ .+|+ .+++...++-.+.|+..+..++.-=+++++..|. ++.|.+.|++++.
T Consensus 373 ~--------~~g~--~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~--g~e~efFgly~i~ 424 (477)
T PF11700_consen 373 S--------FFGL--KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP--GREAEFFGLYAIT 424 (477)
T ss_pred c--------ccCc--ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC--chhhHHHHHHHHH
Confidence 0 0111 2678888899999999999999999999999984 4568889988864
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.95 E-value=1.5e-08 Score=99.57 Aligned_cols=266 Identities=10% Similarity=0.090 Sum_probs=144.0
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhc-ccccccccccccccccchhhhcccchhHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF-SAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy-~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai 126 (406)
-++......+..+++.|..|+++|.+++++.+....+|+++|. +++... ... ...|..|.+.++
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~ 158 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGI--AEL-------------YSWHWVFIVPGI 158 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHH--Hhc-------------CCchhHHHHHHH
Confidence 4556667778889999999999999999999999999999988 454321 111 123566777666
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccC
Q 015467 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (406)
Q Consensus 127 ~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (406)
+.++..++.++..||+|..+..+.. ++. +.++ .++ .+ ..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------------~~~~----------~~~--~~---------~~~~-- 199 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSPQSCGLPPA--EEM--------------PNEE----------PDG--DA---------EKKE-- 199 (379)
T ss_pred HHHHHHHHHheeeCCCccccccCcc--ccC--------------cccc----------ccc--cc---------cccc--
Confidence 6666666666777886532211100 000 0000 000 00 0000
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHH
Q 015467 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (406)
Q Consensus 207 ~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL 286 (406)
++ .+......+++++. +.++.+++..++.+.+...+..|...|+.+ .++.++. . ..+.+
T Consensus 200 ~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~-~~~~~ 258 (379)
T TIGR00881 200 EE-LTKKQIFLQYVLLN-----KVLWYISLGYVFVYVVRTGILDWSPLYLTQ-EKGFSKE-------------K-ASWAF 258 (379)
T ss_pred cc-ccchHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHH-------------H-HHHHH
Confidence 00 00011122333332 567888899999998888888888777654 3332321 1 12334
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhH
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 366 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~ 366 (406)
..+++...+..++..++.+|...|+.........+.+..+....... + ..+.+...+...+.|+.
T Consensus 259 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~g~~ 323 (379)
T TIGR00881 259 TLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN--------------P-AANPLMDLICLFALGFL 323 (379)
T ss_pred HHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC--------------c-chhHHHHHHHHHHHHHH
Confidence 45566666777777888887543332222222222221221111100 0 01334444555556655
Q ss_pred HHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 367 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 367 wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
..........++.+..+ ++..|..+|+.|....+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~ 360 (379)
T TIGR00881 324 VYGPQMLIGVIASELAP--KKAAGTAAGFVGFFAYLGGI 360 (379)
T ss_pred HhhhhHHHHHHHHHhcC--cchhHHHHHHHHHhhhhhhh
Confidence 44444444556666655 35678889999887776653
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=98.93 E-value=7.3e-09 Score=102.66 Aligned_cols=274 Identities=12% Similarity=0.028 Sum_probs=144.4
Q ss_pred HHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHH
Q 015467 44 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 123 (406)
Q Consensus 44 ~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i 123 (406)
..+.-++......+..+++.|..|+++|.+++++......+|+++|..+++.. .+.. ..+..|.+
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l--~~~~-------------g~~~~~~~ 176 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL--IPVF-------------GWRSLFYV 176 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH--hhcc-------------cceeehhh
Confidence 33445667778889999999999999999999999999999999998876531 1111 12444555
Q ss_pred HHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhcccccc
Q 015467 124 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 203 (406)
Q Consensus 124 ~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (406)
.+++.++...+.....||.|....+.++ +...+...+...... .+.++ ...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-------~~~~~------------~~~~ 228 (398)
T TIGR00895 177 GGIAPLLLLLLLMRFLPESIDFLVSKRP---------ETVRRIVNAIAPQMQ-------AEAQS------------ALPE 228 (398)
T ss_pred hhhHHHHHHHHHHHhCCCCChHHHhcCH---------HHHHHHHHHHHHhcc-------ccccc------------cccc
Confidence 5444444444445566775421111100 000000000000000 00000 0000
Q ss_pred ccCCCCCCCchhhHHHHHHHhccCC--HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHH
Q 015467 204 DTNGSFNDGPGAVLVNLLTSLRHLP--PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (406)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~si~~mP--~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~ 281 (406)
+ +......++.++.+++.+ +....+++..++...+++....|.. +..+ .++.++. ..
T Consensus 229 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~~~-------------~~ 287 (398)
T TIGR00895 229 Q------KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMV-ELGFSLS-------------LA 287 (398)
T ss_pred c------ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HcCCCHH-------------HH
Confidence 0 000011233333333322 2333444455555555555544444 2222 1222221 11
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHH
Q 015467 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 361 (406)
Q Consensus 282 Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (406)
.+.+...++...+..++..++.+|+++|.+.....+ .+++........ .+.+..++...
T Consensus 288 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------------------~~~~~~~~~~~ 346 (398)
T TIGR00895 288 -ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLL-GAVFAVLVGSTL-------------------FSPTLLLLLGA 346 (398)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH-HHHHHHHHHHHh-------------------hCHHHHHHHHH
Confidence 233455566677788888999999998854443332 222222111111 04455677778
Q ss_pred HhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 362 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 362 ~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
+.|+.++..+...++++++..++ +..|..+|+.+....+++
T Consensus 347 ~~g~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 347 IAGFFVNGGQSGLYALMALFYPT--AIRATGVGWAIGIGRLGA 387 (398)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCH--HHHHHHHHHHHHHHHHHH
Confidence 89999999999999999998764 455666777776655443
No 22
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.91 E-value=6.8e-08 Score=97.17 Aligned_cols=186 Identities=14% Similarity=0.052 Sum_probs=112.4
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++......+..+++.|..|+++|.+++++......+|.++|..+++. ..... ..+..|.+.+++.
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~--l~~~~-------------g~~~~~~~~~~~~ 167 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHL--IMLKF-------------PWQSLFYTMAAMG 167 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhCc-------------ChHHHHHHHHHHH
Confidence 44445667788999999999999999999998888888888777653 11111 2466777766666
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCC
Q 015467 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (406)
+++.+++....||++..+++ + + .
T Consensus 168 ~i~~~~~~~~~~~~~~~~~~--~----------------------------------------------------~--~- 190 (392)
T PRK10473 168 ILVLLLSLFILKETRPARAP--A----------------------------------------------------A--S- 190 (392)
T ss_pred HHHHHHHHHHcCCCCCcccC--C----------------------------------------------------c--c-
Confidence 66666666667876321100 0 0 0
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHH
Q 015467 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (406)
Q Consensus 209 ~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~ 288 (406)
. .....++.++. +..+..++..++.+.+...+..+...+.-+ .++-++. .. ..-+..
T Consensus 191 --~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~-~~~~~~ 247 (392)
T PRK10473 191 --S-KPRENSESLLN-----RFFLSRLVITTLSVTVILTFVNTSPVLLME-QMGFSRG-------------EY-AIIMAL 247 (392)
T ss_pred --c-hHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HcCCCHH-------------HH-HHHHHH
Confidence 0 00111222221 345555556666666666554443333322 2221211 12 233455
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~ 329 (406)
+++...+..++.+++.||+|+|+++.++.++..+++....+
T Consensus 248 ~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 248 TAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 66677788888999999999999999998877766554443
No 23
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.91 E-value=2.9e-08 Score=104.06 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=57.3
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++......+..|++.|..|+++|.+++++......+|.++|..++.. +.+. +. .-|..|.+.+++.
T Consensus 119 ~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~--l~~~--~~----------GWr~~f~i~a~l~ 184 (491)
T PRK11010 119 FCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALW--LADR--YL----------GWQGMYWLMAALL 184 (491)
T ss_pred HHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHhc--cc----------CHHHHHHHHHHHH
Confidence 45556777888999999999999999999999888898888766543 1110 00 2577888877666
Q ss_pred HHHhhheeeEeeccC
Q 015467 129 TLCALVTIYFADEVP 143 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p 143 (406)
+++.+.++. +||++
T Consensus 185 ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 185 IPCIIATLL-APEPT 198 (491)
T ss_pred HHHHHHHHh-cCCCc
Confidence 666555543 68853
No 24
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.89 E-value=4.3e-08 Score=96.92 Aligned_cols=259 Identities=13% Similarity=0.068 Sum_probs=140.7
Q ss_pred ccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHH-HHHHHHHHH
Q 015467 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF-LVAVVFLTL 130 (406)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f-~i~ai~l~~ 130 (406)
+....+.-+++.|..|+++|.+++++...+..+|..+|..++... .........+. -....|..| ++.+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l-~~~~~~~~~~~----~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 105 GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI-IGSLIFGAGLP----AHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHhccccc----ccccccchhHHHHHHHHHH
Confidence 345567889999999999999999999988888888887776431 11000000000 001245666 433444444
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCC
Q 015467 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (406)
Q Consensus 131 ~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
..++.....+|.|..++++.+.++ +. ..+.. +
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~----------------------------~~~~~-~--- 211 (366)
T TIGR00886 180 PALLIFFVGADTPPGKPATGKLSF----------------KG----------------------------ARWSV-G--- 211 (366)
T ss_pred HHHHHHHhcccCCcccccchhccc----------------cc----------------------------ccccc-c---
Confidence 444445566776532111000000 00 00000 0
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHH
Q 015467 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (406)
Q Consensus 211 ~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~s 290 (406)
+ ...++..+.+++ +..+.+++..++.+..+..+..+.+.|..+ .++-++. ..| +-+.++.
T Consensus 212 ~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~~-~~~~~~~ 271 (366)
T TIGR00886 212 T---GALGDQLKVFRD--RHTWILALLYSVTFGSFLGVSSIFAMFFKD-QFGLSKV-------------TAG-AYASLGG 271 (366)
T ss_pred c---hhHHHHHHHHhc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHH-------------HHH-HHHHHHH
Confidence 0 011122222221 346677777888887777777777777654 4443332 222 2233455
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
+...+..++.+.+.+|+|+|+.+..+..+.+.++....+.. . + ..+.+...+...+.++..+..
T Consensus 272 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~--------------~-~~~~~~~~~~~~~~~~~~g~~ 335 (366)
T TIGR00886 272 LLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGL-V--------------S-PLSLAVFIVLFVALFFFSGAG 335 (366)
T ss_pred HHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcC-C--------------C-cchHHHHHHHHHHHHHHhccc
Confidence 56666777788999999999888777666554443222211 0 0 002333334444445555555
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
+..-++++++..+ +..|..+|+.|..-.+
T Consensus 336 ~~~~~~~~~~~~~---~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 336 NGSTFALVPHIFR---RATGAVSGLVGAIGNL 364 (366)
T ss_pred cchhhhcchhhch---hhcccHHHHHHHhccC
Confidence 5666677776654 5788889988876543
No 25
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.87 E-value=6.4e-08 Score=95.63 Aligned_cols=252 Identities=14% Similarity=0.080 Sum_probs=142.9
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++......+..+++.|..|+++|.++.++.+....+|.++|..++.... ..++ +.. ......|..|.+.+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~--~~~~---~~~--~~~~~w~~~~~~~~~~~ 180 (394)
T TIGR00883 108 FSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS--YLLG---DDA--LLEWGWRIPFLVSAVLV 180 (394)
T ss_pred hhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH--HhcC---HHH--hhccchHHHHHHHHHHH
Confidence 3444556678899999999999999999999999999998887764311 1110 000 00113577787777666
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCC
Q 015467 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (406)
+++..+ ....||.|..+.+++ ++ ++
T Consensus 181 ~~~~~~-~~~~~~~~~~~~~~~----------------------------------------------------~~--~~ 205 (394)
T TIGR00883 181 LIGLYL-RRNLEETPVFEKAQE----------------------------------------------------KH--KK 205 (394)
T ss_pred HHHHHH-HHhcCCChhHHHHHh----------------------------------------------------cc--cc
Confidence 555443 233455421110000 00 00
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHH
Q 015467 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (406)
Q Consensus 209 ~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~ 288 (406)
....++++++ +-++.++.++...++.+.++..+..|...|+-+ .++-++. ..| +-+..
T Consensus 206 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~~-~~~~~ 263 (394)
T TIGR00883 206 ----KRGPIRETLT---KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQ-TLGLSAN-------------SAL-LVLML 263 (394)
T ss_pred ----ccCCHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh-------------HHH-HHHHH
Confidence 0112333333 334567777888888888887777777766643 2332221 111 22344
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA 368 (406)
..+...+...+..++.+|+|+|++...+.++..++.... +.... . ..+.+.......+.|+..+
T Consensus 264 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~-~--------------~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 264 SLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL-LMALL-D--------------SGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH-HHHHh-c--------------CCchHHHHHHHHHHHHHHH
Confidence 555667777788899999999998775544333222111 11110 0 0134555566677788887
Q ss_pred HHhhchhhhhhcccccCCCCcceeehh-hhhhhhc
Q 015467 369 ITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVI 402 (406)
Q Consensus 369 ~~~siPfaLl~~~~~~~~~~~G~~mgl-lN~~i~l 402 (406)
.....-.+++.+..++ +..|..+|+ .++...+
T Consensus 328 ~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 328 MYTGPMGSFLPELFPT--EVRYTGASLAYNLAGAI 360 (394)
T ss_pred HHhhhHHHHHHHhCCc--cceeeEeeehhHhHHHH
Confidence 7777778888887764 344566666 3444333
No 26
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.87 E-value=4.2e-08 Score=112.03 Aligned_cols=255 Identities=14% Similarity=0.094 Sum_probs=145.4
Q ss_pred cccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 015467 51 NNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (406)
Q Consensus 51 ~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~ 130 (406)
.-....+..+++.|..|+++|++++++.+....+|.++|..+++.+ ...+... .. ..........+++.+.+.++
T Consensus 117 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l--~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 191 (1146)
T PRK08633 117 SAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL--FESVNGN-TP--SEILGRIAPAGLVLLAVAVL 191 (1146)
T ss_pred HHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH--HHhhccc-cc--cccccchHHHHHHHHHHHHH
Confidence 3344556678999999999999999999999999999999998751 1110000 00 00011222333333322222
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCC
Q 015467 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (406)
Q Consensus 131 ~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
. ++.++..||.|....+..+ +. .
T Consensus 192 ~-~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~--~--- 214 (1146)
T PRK08633 192 G-LIFAYRLPKVPAAAPEVFD---------------------------------------------------KK--K--- 214 (1146)
T ss_pred H-HHHHhcCcCCCCCCccccc---------------------------------------------------cc--c---
Confidence 2 2333455775422111000 00 0
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHH
Q 015467 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (406)
Q Consensus 211 ~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~s 290 (406)
......+++-++.+.+ .+.++.+.+..++.|...+.+..+...|+.+ .++.++. ... .+-+..+.
T Consensus 215 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~------------~~~-g~~~~~~~ 279 (1146)
T PRK08633 215 YLFPKLLWRNLKLLRS-DRVLWLAIIGLSYFWFISQLAQANFPAYAKE-VLGLDNT------------FQV-QYLLAASA 279 (1146)
T ss_pred cccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCCCcH------------HHH-HHHHHHHH
Confidence 0001112222333332 2456666666777777666666666555544 2332211 011 23355566
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
+.+++.+++..++.+|++++++..++.++++++++...+.. +.+..++.+.+.|+..+..
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~ 339 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--------------------SLASVLVLFFLFGFSAGLF 339 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHHHHHHHHh
Confidence 66777888899999999988888777777665554333322 4556667777888888777
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
...-.+++.+..+ ++..|..+|+.|+...++.
T Consensus 340 ~~~~~~~~~~~~p--~~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 340 IVPLNALIQFRAP--EKELGKVLAANNFLQNVGM 371 (1146)
T ss_pred hHHHHHHHhhcCC--ccchhhhhHHHHHHHHHHH
Confidence 6666777776655 3567888888887765543
No 27
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=3.5e-08 Score=113.08 Aligned_cols=259 Identities=14% Similarity=0.007 Sum_probs=150.8
Q ss_pred ccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 015467 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (406)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~ 131 (406)
-.......|++.|..|++++.+||++.+...++|.++|..+|+.+ -... ..+..|.+++ ++.+.
T Consensus 123 a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l--~~~~-------------~~~~~~~~~~-~~~~~ 186 (1140)
T PRK06814 123 ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA--TISG-------------NFVILVALLM-GIAVL 186 (1140)
T ss_pred HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH--Hhcc-------------ccHHHHHHHH-HHHHH
Confidence 344456889999999999999999999999999999999998751 1111 1345553333 33333
Q ss_pred hhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCC
Q 015467 132 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (406)
Q Consensus 132 ~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (406)
.++..+.++|.+..+.+.. .+ .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~--------------------------------------------------------~~--~ 208 (1140)
T PRK06814 187 GWLASLFIPKTGNAAPDLK--------------------------------------------------------ID--R 208 (1140)
T ss_pred HHHHHhhCCCCCCCCCCCe--------------------------------------------------------ec--c
Confidence 3344455666532111000 00 0
Q ss_pred CchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHH
Q 015467 212 GPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (406)
Q Consensus 212 ~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~si 291 (406)
.......+-++.+++ .+.++.+.+..++.|+.+..++.+...|+.+ .++.++. .. .+.+..+++
T Consensus 209 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~~-------------~~-g~~~~~~~~ 272 (1140)
T PRK06814 209 NIIRSTITLLKYAKA-DKRIWLAILGISWFWLVGAVVLSQLPLLAKE-TLGGDEN-------------VA-TLFLAVFSV 272 (1140)
T ss_pred chHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HcCCchH-------------HH-HHHHHHHHH
Confidence 001112233333333 3678888888888888888877777777654 5554432 22 233556667
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhc--ccCCCccccCCCcchhhHHHHHHHHHhhhHHHH
Q 015467 292 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVR--EYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 369 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~ 369 (406)
..++.+++..++.++.+.++....+.++.+++.+...+....... .+.-.+...+.+ .+.+...+...+.|+..+.
T Consensus 273 g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~ 350 (1140)
T PRK06814 273 GVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK--RHGWRILIDLFGLAAAGGL 350 (1140)
T ss_pred HHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc--cccHHHHHHHHHHHHHHHH
Confidence 777888888999877666555444444444433322221000000 000000000000 1445566677778888888
Q ss_pred HhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 370 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 370 ~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.+..-.+++.+..+ ++..|..+|+.|++..+.+
T Consensus 351 ~~~~~~~~~~~~~p--~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 351 YIVPLFAALQAWAN--PAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred hHHHHHHHHHhhCC--cccceeeeHHHHHHHHHHH
Confidence 77777788777665 4678899999998776543
No 28
>PRK03545 putative arabinose transporter; Provisional
Probab=98.85 E-value=6.7e-08 Score=97.38 Aligned_cols=227 Identities=13% Similarity=0.135 Sum_probs=126.6
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
..+..+++.|..|+++|++++++.+...++|.++|..+++. +.+.+ ..|..|.+.+++.++..++
T Consensus 115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~~-------------gw~~~f~~~~~~~~l~~~~ 179 (390)
T PRK03545 115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQYL-------------GWRTTFLAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHHh-------------cHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999998887754 11111 2477777777666555554
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCch
Q 015467 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (406)
Q Consensus 135 Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (406)
.....||.|. +++ + ..
T Consensus 180 ~~~~~~~~~~---~~~--------------------------------------------------------~-----~~ 195 (390)
T PRK03545 180 LIKLLPLLPS---EHS--------------------------------------------------------G-----SL 195 (390)
T ss_pred HHHhCCCCCC---CCc--------------------------------------------------------c-----hH
Confidence 4444455320 000 0 01
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHH
Q 015467 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (406)
Q Consensus 215 ~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~ 294 (406)
+.++++++. +.++.++...++...+.+....|...|..+ .++.+++ . ..+.+..+++...
T Consensus 196 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~-------------~-~~~~~~~~~~~~~ 255 (390)
T PRK03545 196 KSLPLLFRR-----PALVSLYLLTVVVVTAHFTAYSYIEPFVQQ-VAGLSEN-------------F-ATLLLLLFGGAGI 255 (390)
T ss_pred HHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCcc-------------H-HHHHHHHHHHHHH
Confidence 112232222 345555555555555555444455555433 3333322 1 2334556667778
Q ss_pred HHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhch
Q 015467 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 374 (406)
Q Consensus 295 v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siP 374 (406)
+.+++..++.+|+++|.+.... .+.++++....... .+.+...+...+.|+..+......
T Consensus 256 ~g~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~l~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~ 315 (390)
T PRK03545 256 IGSVLFSRLGNRHPSGFLLIAI-ALLLVCLLLLLPAA-------------------NSEWHLSVLSIFWGIAIMCIGLAM 315 (390)
T ss_pred HHHHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHHh-------------------chHHHHHHHHHHHHHHHhcchHHH
Confidence 8888899999999988765433 33333322111111 034555556666677655443333
Q ss_pred hhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 375 FAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 375 faLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.+.+.+..+ +..|..+|+.+....++
T Consensus 316 ~~~~~~~~~---~~~~~~~g~~~~~~~~g 341 (390)
T PRK03545 316 QVKVLKLAP---DATDVAMALFSGIFNIG 341 (390)
T ss_pred HHHHHHhCC---CcHHHHHHHHHHHHHHH
Confidence 344444333 24455666666554443
No 29
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.84 E-value=2.1e-07 Score=92.69 Aligned_cols=183 Identities=17% Similarity=0.203 Sum_probs=114.1
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++......+..+++.|..|+++|.++.++.....++|+++|..+++. ..+.. ..|..|.+.+++
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~-------------~~~~~~~~~~~~ 154 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW--LLVWF-------------SWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHc-------------ChHHHHHHHHHH
Confidence 455556667788999999999999999999999999999998887753 11111 246777777766
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCC
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (406)
.++..++.....||++.++++ + + .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~--~---------------------------------------------------~---~ 178 (377)
T PRK11102 155 AILAAALVFFFIPETLPKERR--Q---------------------------------------------------P---F 178 (377)
T ss_pred HHHHHHHHHHhCCccCccccc--C---------------------------------------------------C---C
Confidence 666666666667775321100 0 0 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHH
Q 015467 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (406)
Q Consensus 208 ~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~ 287 (406)
+. +.....++++++. +.++..++..++.+.+++.+..+...+.-+ .++-++. ..| +-+.
T Consensus 179 ~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-------------~~g-~~~~ 237 (377)
T PRK11102 179 HL-RTTIRNFASLFRH-----KRVLGYMLASGFSFAGMFSFLTAGPFVYIE-LNGVSPQ-------------NFG-YYFA 237 (377)
T ss_pred Ch-HHHHHHHHHHHcC-----hHHHHHHHHHHHHHHHHHHHHHcCHHHHHH-HhCCCHH-------------HHH-HHHH
Confidence 00 0001122233222 445667777888888887776654443322 2322221 122 3345
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFA 322 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai 322 (406)
.+.+...+..++..++.+|+|+|+++.++.++..+
T Consensus 238 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 56667777788889999999999998888765443
No 30
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.84 E-value=1.6e-07 Score=94.38 Aligned_cols=239 Identities=15% Similarity=0.098 Sum_probs=135.9
Q ss_pred cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
....+..+++.|..|+++|.+++++......+|.++|..+++. ..+. ...|..|.+.+++.+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~~~~~~~~~~ 186 (408)
T PRK09874 122 GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL--LADS-------------YGLRPVFFITASVLFLCF 186 (408)
T ss_pred hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHH-------------hCHHHHHHHHHHHHHHHH
Confidence 3456678899999999999999999999889999998887764 1111 125677777777766666
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCC
Q 015467 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (406)
Q Consensus 133 ~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (406)
+...+..||++.+.++ . +
T Consensus 187 ~~~~~~~~~~~~~~~~-~--------------------------------------------------------~----- 204 (408)
T PRK09874 187 LVTLFCIRENFQPVSK-K--------------------------------------------------------E----- 204 (408)
T ss_pred HHHHHHhccCcccccc-h--------------------------------------------------------h-----
Confidence 6666667775311100 0 0
Q ss_pred chhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHH
Q 015467 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (406)
Q Consensus 213 ~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv 292 (406)
....++.++.++ -|+.++.++...++..++...+..+...|+.+ .. ++.. ...+. .|. -..++.+.
T Consensus 205 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~----~g~-~~~~~~l~ 270 (408)
T PRK09874 205 -MLHMREVVTSLK-NPKLVLSLFVTTLIIQVATGSIAPILTLYVRE-LA-GNVS-----NIAFI----SGM-IASVPGVA 270 (408)
T ss_pred -hhHHHHHHHhCc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-ccch-----HHHHH----HHH-HHHHHHHH
Confidence 001223333332 34444444444444444433333333333332 11 1111 00111 111 12234445
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
..+...+..++.+|+|+|++..++.++.+++++...+.. +.+...+...+.|+..+....
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--------------------TPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHhhhHhhHH
Confidence 556666778899999999998888776655443322221 445556666677887777655
Q ss_pred chhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 373 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 373 iPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.-.+++.+..+ ++..|..+|+.+....+++
T Consensus 331 ~~~~~~~~~~~--~~~~g~~~~~~~~~~~~g~ 360 (408)
T PRK09874 331 AVQTLLVYNSS--NQIAGRIFSYNQSFRDIGN 360 (408)
T ss_pred HHHHHHHHhCC--cccceeeehHHHHHHHHHH
Confidence 54445544333 4567888888877665554
No 31
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.82 E-value=1.2e-07 Score=96.48 Aligned_cols=236 Identities=12% Similarity=0.068 Sum_probs=133.3
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~ 133 (406)
...+.-+++.|.+|++++++++++.....++|.++|..+++.. .. .. ..+..|.+.++..+++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l-~~-~~-------------~~~~~~~~~~~~~~~~~~ 191 (417)
T PRK10489 127 GVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL-IA-AG-------------GVAWNYGLAAAGTFITLL 191 (417)
T ss_pred HHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH-HH-HH-------------hhHHHHHHHHHHHHHHHH
Confidence 3455678899999999999999999999999999999988641 11 10 235566666655555544
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCc
Q 015467 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (406)
Q Consensus 134 ~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (406)
. ++..||.+.+ +..+ + ++
T Consensus 192 ~-~~~l~~~~~~--~~~~-------------------------------------------------------~----~~ 209 (417)
T PRK10489 192 P-LLRLPALPPP--PQPR-------------------------------------------------------E----HP 209 (417)
T ss_pred H-HHhCCCCCCC--Cccc-------------------------------------------------------c----cc
Confidence 3 3445654211 0000 0 00
Q ss_pred hhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHH
Q 015467 214 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 293 (406)
Q Consensus 214 ~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~ 293 (406)
.+.+++-++.+.+-| .++.+.+..++ +.....+..+...|+.+ +++.++. . ..+-+..+++..
T Consensus 210 ~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~p~~~~~-~~g~~~~-------------~-~g~~~~~~~~g~ 272 (417)
T PRK10489 210 LRSLLAGFRFLLASP-VVGGIALLGGL-LTMASAVRVLYPALADE-VWQMGAA-------------Q-IGLLYAAVPLGA 272 (417)
T ss_pred hHHHHHHHHHHHcCh-HHHHHHHHHHH-HHHHHhHHHhhHHHHHh-ccCCChh-------------H-hHHHHHHHHHHH
Confidence 111222233333323 34444444433 22223333344444433 4443332 1 123344556666
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhc
Q 015467 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 373 (406)
Q Consensus 294 ~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~si 373 (406)
.+.+++.+++.+|.+++++...+.++.+++++...+. | +.+...+...+.|+..+....+
T Consensus 273 ~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------------~---~~~~~~~~~~~~g~~~~~~~~~ 332 (417)
T PRK10489 273 ALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-----------------P---MWILAVLCLALFGYLSAISSLL 332 (417)
T ss_pred HHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-----------------c---hHHHHHHHHHHHHHHHHHHHHH
Confidence 7777788888888777766666666555444322111 1 4455566677778877776667
Q ss_pred hhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 374 PFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 374 PfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
.++++.++.++ +..|..+|+.+....++|.
T Consensus 333 ~~~~~~~~~p~--~~~g~~~g~~~~~~~~g~~ 362 (417)
T PRK10489 333 QYTLLQTQTPD--EMLGRINGLWTAQNVTGDA 362 (417)
T ss_pred HHHHHHhhCCH--HHHHHHHHHHHHHHhhhHh
Confidence 77888777653 3457778888776666553
No 32
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.82 E-value=5.6e-08 Score=101.74 Aligned_cols=275 Identities=15% Similarity=0.065 Sum_probs=154.3
Q ss_pred hHHHHHhcC-CCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 015467 57 PARALLADL-SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (406)
Q Consensus 57 P~RAli~D~-~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~T 135 (406)
..-+.+.|. .|+++|.+++++.+...++|.++|-.+++. +.+.+ ..|++|.+...+.+++.+++
T Consensus 114 ~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~--l~~~~-------------gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 114 ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI--LLEHF-------------YWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC-------------ChHHHHHHHHHHHHHHHHHH
Confidence 345556565 477999999999999999999999998875 21111 25788998888888887777
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCccccc---------ccccCCCCCCCCCCCCCCcccCcc-ccchhhhc-cccccc
Q 015467 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNA---------ISKSKHDMPAAPNANGNKVESGHE-SDANLKHI-SKKAED 204 (406)
Q Consensus 136 l~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~ 204 (406)
....||+|-++.++ .|...... ........ +..++..... ........ ....++
T Consensus 179 ~~~l~~~~~~~~~~---------~d~~g~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~f~~~e 243 (495)
T PRK14995 179 ARYVPRQAGRRDQP---------LNLGHALMLIVAILLLVYSAKTALK------GFLSLWVTSLTLLTGALLLGLFIRTQ 243 (495)
T ss_pred HHhCCCCCCCCCCC---------CChHhHHHHHHHHHHHHHHHHhccc------cCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 77778754211000 00000000 00000000 0000000000 00000000 000000
Q ss_pred cCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHH
Q 015467 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (406)
Q Consensus 205 ~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~ 284 (406)
. ..+.+.-. .++++ .+.++..++..++..++++++.+|...|+.+ +++.+|. +.| .
T Consensus 244 ~---~~~~p~~~-~~lf~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~-v~g~s~~-------------~ag-~ 299 (495)
T PRK14995 244 L---AASRPMID-MRLFT-----HRIILSGVVMAMTAMITLVGFELLMAQELQF-VHGLSPL-------------EAG-M 299 (495)
T ss_pred h---cCCCCCcC-HHHhC-----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH-------------HHH-H
Confidence 0 00011100 12222 2456677788888888888888888887765 5554442 222 3
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
-++.+++...+.+.+.+++.+|+|+|++...+.++.+++++...+... + .+.+.......+.|
T Consensus 300 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~---~--------------~~~~~~~~~~~l~G 362 (495)
T PRK14995 300 FMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF---S--------------TQQWQAWGLMALLG 362 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC---C--------------CchHHHHHHHHHHH
Confidence 355566777788888899999999999888888777666554333220 0 03344556677888
Q ss_pred hHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 365 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
+..+.........+.+..+ +++.|...|+.|.+..+++
T Consensus 363 ~g~g~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 363 FSAASALLASTSAIMAAAP--PEKAAAAGAIETMAYELGA 400 (495)
T ss_pred HhHHHHHHHHHHHHHhcCC--HHhcchHHHHHHHHHHHHH
Confidence 8888776655555555444 3567777888887766543
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.81 E-value=6.2e-08 Score=95.12 Aligned_cols=101 Identities=18% Similarity=0.149 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
-...+++...+.+++.+++.+|+|+|+...++.++.++++....+.. + .+....+....+.|
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~~~~~~~~g 306 (377)
T TIGR00890 245 AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP----M--------------LNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc----c--------------chhHHHHHHHHHHH
Confidence 34556677778888889999999999998888877776654333221 0 01222334456677
Q ss_pred hHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 365 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
+.++....+-.+++.+..+ +++.|..+|+.|....+++.
T Consensus 307 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~ 345 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFG--PANSAANYGFLYTAKAVAGI 345 (377)
T ss_pred HHhccchhccHHHHHHHhh--hhhhhhHhHHHHHHHHHHHH
Confidence 8887777666677777765 35678889999888776653
No 34
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.81 E-value=5e-08 Score=97.23 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=56.1
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++.........+++.|..|+++|.+++++.....++|.++|..++.. ..+.. +...|..|.++++..
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~--l~~~~-----------~~~w~~~f~~~~~~~ 178 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL--VVPVW-----------GDGWRALFFISILPI 178 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHhc-----------CccHHHHHHHHHHHH
Confidence 34455667788999999999999999999999999999998877654 11111 113577787776655
Q ss_pred HHHhhheeeEeeccC
Q 015467 129 TLCALVTIYFADEVP 143 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p 143 (406)
+++.. .....||++
T Consensus 179 ~~~~~-~~~~~~~~~ 192 (405)
T TIGR00891 179 IFALW-LRKNIPEAE 192 (405)
T ss_pred HHHHH-HHHhCCCCh
Confidence 55543 234556653
No 35
>TIGR00898 2A0119 cation transport protein.
Probab=98.78 E-value=1.2e-07 Score=98.73 Aligned_cols=267 Identities=13% Similarity=0.186 Sum_probs=139.0
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
=++........-+++.|..|+++|..+.++.....++|.+++..++... . +.|..|.+.++.
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~----------------~wr~~~~~~~i~ 252 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--P----------------DWRWLQLAVSLP 252 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--h----------------HHHHHHHHHHHH
Confidence 4566667888999999999999999999998888888888877766431 0 145666666655
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccc--cCCCCCCCCCCCCCCcccCccccchhhhcccccccc
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISK--SKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (406)
.++..+.. +.+||.|-.....++.+ + ..+...+ .++. .+... +.... ...++.
T Consensus 253 ~~~~~~~~-~~~~esp~~l~~~~~~~-------~-a~~~l~~~~~~~~---------~~~~~------~~~~~-~~~~~~ 307 (505)
T TIGR00898 253 TFLFFLLS-WFVPESPRWLISQGRIE-------E-ALKILQRIAKING---------KKLPA------EVLSL-SLEKDL 307 (505)
T ss_pred HHHHHHHH-HhcCCChHHHHHCCCHH-------H-HHHHHHHHHHHcC---------CCCCH------HHHhh-hhhhhh
Confidence 55554443 56788652111000000 0 0000000 0000 00000 00000 000000
Q ss_pred CCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHH
Q 015467 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (406)
Q Consensus 206 ~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~g 285 (406)
.++ + ....++++++. +.+++..+..++.|+......+....+... ++++ .| +.
T Consensus 308 ~~~--~-~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~--------~~ 360 (505)
T TIGR00898 308 SSS--K-KQYSFLDLFRT-----PNLRKTTLCLMMLWFTTAFSYYGLVLDLGN--LGGN---------IY--------LD 360 (505)
T ss_pred hhc--c-CCCcHHHHhCC-----hHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCC---------hH--------HH
Confidence 000 0 01234455443 556666666666666543222112222211 1111 12 22
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
.++.+++.....++...+.+|+|+|++..++.++.+++++...+.. +. ..+...++..+.++
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~----~~--------------~~~~~~~~~~~~~~ 422 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP----VD--------------LYFLRTALAVLGKF 422 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC----CC--------------chHHHHHHHHHHHH
Confidence 2344555556666777889999999999998888776655443322 00 12333444445555
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
..+....+.+++.+|..+.+ ..|..+|+.+....+++
T Consensus 423 ~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~ig~ 459 (505)
T TIGR00898 423 GITSAFQMVYLYTAELYPTV--VRNLGVGVCSTMARVGS 459 (505)
T ss_pred HHHHHHHHHHHHhcccccHH--HHhhhHhHHHHHHHHHH
Confidence 55566667778888876643 33445777777665554
No 36
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.77 E-value=3.5e-07 Score=93.09 Aligned_cols=78 Identities=18% Similarity=0.294 Sum_probs=56.3
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++....+.+..+++.|..|+++|++++++......+|..+|-.+++.. . .+ ..+..|.+.+++
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l-~-~~--------------g~~~~f~~~~~~ 173 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL-L-QY--------------DFRLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-Hh--------------hHHHHHHHHHHH
Confidence 3343344556789999999999999999999999999999998888752 1 10 257788887766
Q ss_pred HHHHhhheeeEeec
Q 015467 128 LTLCALVTIYFADE 141 (406)
Q Consensus 128 l~~~~~~Tl~~v~E 141 (406)
.+++.++.....||
T Consensus 174 ~~~~~i~~~~~~~~ 187 (400)
T PRK11646 174 FVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHhCCc
Confidence 66655444444555
No 37
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.77 E-value=9.1e-08 Score=96.80 Aligned_cols=80 Identities=13% Similarity=0.232 Sum_probs=58.6
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccc---cccccccccccccchhhhcccchhHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG---ASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g---~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ 124 (406)
-++.........+++.|..|+++|.++.++.....++|.++|+.++ .. +... ...|..|.+.
T Consensus 138 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~~-------------~~w~~~f~~~ 202 (481)
T TIGR00879 138 GIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS--LNNT-------------LGWRIPLGLQ 202 (481)
T ss_pred HhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--CCCC-------------ccHHHHHHHH
Confidence 4455566777899999999999999999999999999999999988 32 1110 1357888886
Q ss_pred HHHHHHHhhheeeEeeccC
Q 015467 125 VVFLTLCALVTIYFADEVP 143 (406)
Q Consensus 125 ai~l~~~~~~Tl~~v~E~p 143 (406)
++..++..+ ..+..||.|
T Consensus 203 ~~~~~~~~~-~~~~l~~~~ 220 (481)
T TIGR00879 203 LIPAGLLFL-GLFFLPESP 220 (481)
T ss_pred HHHHHHHHH-HHhcCCCCh
Confidence 655544443 345678865
No 38
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.75 E-value=2.5e-07 Score=93.79 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=51.0
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~ 133 (406)
..-+..|++.|..|+++|.+++++...-.++|.++|..++.. +.+.. . .-|..|.+.+++.+++.+
T Consensus 111 ~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~--l~~~~--~----------gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 111 QDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW--LADRV--L----------GWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH--HHhcc--c----------CHHHHHHHHHHHHHHHHH
Confidence 334778999999999999999999998778888888666542 11100 0 246778776666665555
Q ss_pred heeeEeecc
Q 015467 134 VTIYFADEV 142 (406)
Q Consensus 134 ~Tl~~v~E~ 142 (406)
. .+..||+
T Consensus 177 ~-~~~~~e~ 184 (402)
T PRK11902 177 T-TLWAPEP 184 (402)
T ss_pred H-HHhcCCC
Confidence 3 3456775
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.72 E-value=1.5e-07 Score=96.98 Aligned_cols=283 Identities=14% Similarity=0.094 Sum_probs=149.9
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++....+.+..+++.|..|+++|.+++++......+|..+|..+++. +.+.. ..|.+|.+.+++
T Consensus 101 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~-------------~w~~~f~~~~~~ 165 (485)
T TIGR00711 101 GFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGW--IIENY-------------HWRWIFLINVPI 165 (485)
T ss_pred HhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhH--hccCc-------------CceehhhhhhHH
Confidence 455566777889999999999999999999999999999999888764 11111 235666666655
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccc----cccccCCCCCCCCCCCCCCcccCccccchhhh------
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRN----AISKSKHDMPAAPNANGNKVESGHESDANLKH------ 197 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 197 (406)
.+++.++.....||++....+. .|..... +....... ..++.+ ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~---------~d~~g~~l~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~ 229 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPAASEN---------FDFLGLLLLSVGLGSLLYG-----LSEGPE--RGWFDSNEILILSITGL 229 (485)
T ss_pred HHHHHHHHHHHcCCccccccCC---------CcHHHHHHHHHHHHHHHHH-----HhhCCC--CCCCCchHHHHHHHHHH
Confidence 5555555555567643111100 0000000 00000000 000000 00000000000
Q ss_pred ----ccccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhH
Q 015467 198 ----ISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVK 273 (406)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~ 273 (406)
.....+.+ + +++... .++++. +.++..++..++..++++....|...|..+ +++.++.
T Consensus 230 ~~~~~~~~~~~~-~---~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~s~~------- 291 (485)
T TIGR00711 230 VAIIAFVVWELT-D---DNPLVD-LRLFKY-----RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQ-VLGYTAL------- 291 (485)
T ss_pred HHHHHHHHHHHc-C---CCCccC-HHHHcC-----CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------
Confidence 00000000 0 000000 112221 345666788888888888887777777654 4443332
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhh
Q 015467 274 FYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIK 353 (406)
Q Consensus 274 ~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 353 (406)
..| +-+..+.+...+.+.+..++.+|+|+|++..++.++.++++....+.. . |+ .+.
T Consensus 292 ------~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~--~-------------~~-~~~ 348 (485)
T TIGR00711 292 ------QAG-LHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF--T-------------PD-TPF 348 (485)
T ss_pred ------HHH-HHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC--C-------------CC-CCH
Confidence 122 334556667777888888999999999998888777665544322110 0 10 123
Q ss_pred HHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 354 VASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 354 ~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
+.......+.|+..+.....-...+.+..+ ++..|..+|+.|....+++
T Consensus 349 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~g~ 397 (485)
T TIGR00711 349 LAIALPQFIRGFGMGCFFMPLTTIALSGLP--PHKIARGSSLSNFTRQLGG 397 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHhHHHHHHHHHHHHHH
Confidence 344455666777776655433333333333 4567888998888766544
No 40
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.71 E-value=1.7e-07 Score=99.22 Aligned_cols=233 Identities=19% Similarity=0.207 Sum_probs=141.7
Q ss_pred ccchhhH-HHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 015467 52 NTVQGPA-RALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (406)
Q Consensus 52 n~~q~P~-RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~ 130 (406)
+....|. .|++.|++|++|...||++.+....+..++|-.+|++ ..... ....+|.+.++.+++
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~-----Lva~~----------G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI-----LVAFF----------GAAAAFLINALSFLI 181 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH-----HHHHH----------HHHHHHHHHHHHHHH
Confidence 4444454 6899999999999999999999999999999999886 12211 135677887776666
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCC
Q 015467 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (406)
Q Consensus 131 ~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
++.. +...|.++ ++++.. + |
T Consensus 182 ~i~~-l~~~~~~~--~~~~~~---------------------------------------------------~---e--- 201 (524)
T PF05977_consen 182 SILA-LLRWKPPP--PPSSLP---------------------------------------------------R---E--- 201 (524)
T ss_pred HHHH-HHHccccc--cccccc---------------------------------------------------h---h---
Confidence 5443 33444321 000000 0 1
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHH
Q 015467 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (406)
Q Consensus 211 ~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~s 290 (406)
.....+++=++-+++= |.++.+.+..++..+...+++.-. ..+.++.+++++. .| |.- +..++
T Consensus 202 -~~~~~l~~G~ryv~~~-~~l~~~l~~~~~~~l~~~a~~aLl-Pl~a~~~l~~~a~-------~y--Gll-----~a~~g 264 (524)
T PF05977_consen 202 -RFFSALREGLRYVRSS-PPLRSVLLRSFLFNLFASAVWALL-PLFARDVLGGGAS-------GY--GLL-----LAAFG 264 (524)
T ss_pred -hhhhhHHHHHHHHhcc-hHHHHHHHHHHHHHHhhhHHHHhh-hHHHHHHhCCcHH-------HH--HHH-----HHHHH
Confidence 1123355555555543 456666555544333333333222 2334445665543 12 333 33344
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
+-+.+.+++++++.++++.+++...+.++++++++...+.. +.+.+.+...+.|++|...
T Consensus 265 vGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--------------------~~~~~~~~l~l~G~~~~~~ 324 (524)
T PF05977_consen 265 VGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--------------------SFWLALIALFLAGAAWIIA 324 (524)
T ss_pred HHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--------------------HHHHHHHHHHHHHHHHHHH
Confidence 56677888999999999999998888888887766544433 6788888889999999988
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhh
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNL 398 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~ 398 (406)
++.=.+++-+..+++ -.|--++++++
T Consensus 325 ~~~~~t~~Q~~~P~~--~~GRv~si~~~ 350 (524)
T PF05977_consen 325 NSSLNTLVQLSVPDW--VRGRVFSIYQM 350 (524)
T ss_pred HHHHHHHHHHhCCHH--HHhHHHHHHHH
Confidence 765445544444432 33444444443
No 41
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.68 E-value=1e-06 Score=89.43 Aligned_cols=255 Identities=18% Similarity=0.216 Sum_probs=144.8
Q ss_pred HHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHH
Q 015467 41 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 120 (406)
Q Consensus 41 v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~ 120 (406)
++.|.+.-+++++.+.|.-||+.|.+|||+|.++-++.=.|.=+|-+++..+.+. -++. |+. ..++.+
T Consensus 93 ~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~-lL~~---~s~--------~rL~~v 160 (403)
T PF03209_consen 93 ALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGR-LLDP---FSP--------ERLIQV 160 (403)
T ss_pred HHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHH-Hccc---cCH--------HHHHHH
Confidence 5566666789999999999999999999999999999999988888888776553 1222 221 133334
Q ss_pred HHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccc
Q 015467 121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 200 (406)
Q Consensus 121 f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (406)
+...+++.++-.++.++ =.|++.++....
T Consensus 161 ~~~~a~i~~~l~~ia~w-g~E~r~~~~~~~-------------------------------------------------- 189 (403)
T PF03209_consen 161 IQGVALIALLLNLIALW-GQEPRRSRRAAA-------------------------------------------------- 189 (403)
T ss_pred HHHHHHHHHHHHHHHHH-hcccCCcccccC--------------------------------------------------
Confidence 33333322222222222 223321111100
Q ss_pred cccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhH
Q 015467 201 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (406)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr 280 (406)
+ +++...+++.++.+..= +.-|+..+.-+++=++++--=.---.|=|| ||+-.+.++..=...+.-
T Consensus 190 --~-------~~~~~~f~~a~~~~~~~-~~a~~f~~fl~l~t~a~~~QD~iLEPygg~-Vfgmsv~eTT~Lta~~~~--- 255 (403)
T PF03209_consen 190 --A-------ERPRPPFREAWRQVWAS-PQARRFFVFLFLGTLAFFMQDVILEPYGGE-VFGMSVGETTRLTAFWGG--- 255 (403)
T ss_pred --C-------CCCCccHHHHHHHHHhC-CChhHHHHHHHHHHHHHHhhHHHcCCchhH-HcCCCHHHHHHHHHHHHH---
Confidence 0 01123456666666633 455666666666666665554445556565 776555431110112222
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH
Q 015467 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360 (406)
Q Consensus 281 ~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (406)
|. |+... +.++. +.++.+.+++-.++....++|+....+.... ++.+....-.
T Consensus 256 -G~--L~G~~----~~g~~---l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~-----------------~~~~~~~~~~ 308 (403)
T PF03209_consen 256 -GT--LLGML----LAGFL---LSRRLGKKRTAALGCLLGALAFALIILAGPL-----------------GSPWLFRPGV 308 (403)
T ss_pred -HH--HHHHH----HHHHH---hcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-----------------ccchHHHHHH
Confidence 22 11111 12222 3367777877777777777666544433311 1455566666
Q ss_pred HHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhh
Q 015467 361 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 361 ~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~ 401 (406)
.++|+.-+....--.+++-+... +++.|++||++..+-.
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~--~~~aG~~mG~WGaaQA 347 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTS--AGRAGLFMGAWGAAQA 347 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCC--CcchhHHHHHHHHHHH
Confidence 77788877777666666666554 3578999999876543
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.62 E-value=7.5e-07 Score=90.46 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=56.4
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++....+....+++.|..|+++|++++++.....++|.++|-.+++. ..+.+ ..|.+|.+.+++
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~--l~~~~-------------gw~~~f~~~~~l 183 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF--LGELI-------------GWRNVFNAAAVM 183 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhc-------------CHHHHHHHHHHH
Confidence 455556677888899999999999999999999899999998888764 11111 246777776665
Q ss_pred HHHHhhheeeEeecc
Q 015467 128 LTLCALVTIYFADEV 142 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~ 142 (406)
.+++.++.....||+
T Consensus 184 ~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 184 GVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHCCCC
Confidence 555554433344553
No 43
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.61 E-value=1.3e-06 Score=88.31 Aligned_cols=69 Identities=14% Similarity=0.260 Sum_probs=42.7
Q ss_pred HHHhcCCCchhhh--hHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheee
Q 015467 60 ALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIY 137 (406)
Q Consensus 60 Ali~D~~p~~qq~--~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~ 137 (406)
+++.|..++++|. ..+++.....++|.++|-.+++. ..+.+ ..|..|.+.+++.+++.++...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~--l~~~~-------------gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 128 ALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA--LAMGF-------------SFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH--HHHhc-------------ChHHHHHHHHHHHHHHHHHHHh
Confidence 4555655554443 23456666778888888887754 11111 2477888877766666666666
Q ss_pred EeeccC
Q 015467 138 FADEVP 143 (406)
Q Consensus 138 ~v~E~p 143 (406)
..||.|
T Consensus 193 ~~~~~~ 198 (393)
T PRK15011 193 FLPSMR 198 (393)
T ss_pred hcCccC
Confidence 778764
No 44
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.60 E-value=1.4e-06 Score=87.71 Aligned_cols=131 Identities=11% Similarity=0.004 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|.++.++++.++.+.++..+..|.+.|+.+ ++.++. ..|. .+.+..+...+..++.+++.||+|
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--~g~s~~-------------~~g~-l~~~~~~~~i~~~~~~~~l~~r~g 268 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--AGISAS-------------ATGL-LWGIGVLAEIIIFAFSNKLFQNCS 268 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHh-------------HHHH-HHHHHHHHHHHHHHHhHHHHhhCC
Confidence 678888899999999999998888888844 333322 2232 244556666667778889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
.|++..++.++.++......+.. +.+..+.+..+-|+.++.........+.+. + ++.
T Consensus 269 ~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~--~~~ 325 (382)
T TIGR00902 269 ARDLLLISAIACVGRWAIIGAIE--------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-P--GSE 325 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHh--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C--Hhh
Confidence 99999999888887766554433 667778888999999999998888888764 4 345
Q ss_pred cceeehhhhh
Q 015467 389 QGLAIGVLNL 398 (406)
Q Consensus 389 ~G~~mgllN~ 398 (406)
.+..+|++|.
T Consensus 326 ~~~~q~~~~~ 335 (382)
T TIGR00902 326 IAKLQALYNA 335 (382)
T ss_pred HHHHHHHHHH
Confidence 5677777763
No 45
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.59 E-value=1.1e-06 Score=88.54 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=131.1
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
+.+..+....+++.|. +++++++++....+..+|.++|-.+++. +...+ ..|..|.+.++..+
T Consensus 107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~--l~~~~-------------g~~~~f~~~~~~~~ 169 (382)
T PRK11128 107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGK--LVSWF-------------GEQAILWILTAGVA 169 (382)
T ss_pred HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHH--HHHHc-------------ChhHHHHHHHHHHH
Confidence 3445555677788876 4556777888888888888888887764 11111 13556666555544
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCC
Q 015467 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (406)
+..+... ..||++ ++++++ ++ .
T Consensus 170 ~~~~~~~-~~~~~~--~~~~~~---------------------------------------------------~~--~-- 191 (382)
T PRK11128 170 SMLLGQL-LRPTIM--PQGESR---------------------------------------------------QQ--E-- 191 (382)
T ss_pred HHHHHHH-ccCCCC--Cccccc---------------------------------------------------cc--c--
Confidence 4443322 334431 110000 00 0
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHH
Q 015467 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (406)
Q Consensus 210 ~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~ 289 (406)
+.....+++++|. |.++.+++..++.+.+...+..|...|..+ .+.+++ ..|.. +.+.
T Consensus 192 -~~~~~~~~~i~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~g~s~~-------------~~g~~-~~~~ 249 (382)
T PRK11128 192 -SAGWPAWKALLKE-----PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA--AGYSAS-------------TIGYL-WSLG 249 (382)
T ss_pred -ccccchHHHHHcC-----hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH--CCCCHh-------------HHHHH-HHHH
Confidence 0011234555544 677778888888888877777777776643 232221 22222 2244
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHH
Q 015467 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 369 (406)
Q Consensus 290 siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~ 369 (406)
.+...+..++.+++.||+++|++..++.++.+++++...+.. +.+..++...+.|+.++.
T Consensus 250 ~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 250 VVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--------------------ALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--------------------hHHHHHHHHHHHHHHHHH
Confidence 455566667888999999999998888777776654333222 566667777778888777
Q ss_pred HhhchhhhhhcccccCCCCcceeehhhh
Q 015467 370 TYSVPFAITAELTADSGGGQGLAIGVLN 397 (406)
Q Consensus 370 ~~siPfaLl~~~~~~~~~~~G~~mgllN 397 (406)
.+..=-..+.+. + +.+.|..+|+.+
T Consensus 310 ~~~~~~~~~~~~-~--~~~~~~~~~~~~ 334 (382)
T PRK11128 310 CHLAAMRYIAAR-P--GSEVIRLQALYS 334 (382)
T ss_pred HHHHHHHHHHHC-C--HhhhHHHHHHHH
Confidence 543322222332 2 234577777776
No 46
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.59 E-value=1.6e-06 Score=88.96 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=52.9
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~ 133 (406)
...+.-+++.|..|+++|.++.++.....++|+++|..+++. ....+ ..|..|.+.+++.++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~--l~~~~-------------gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 128 GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGA--IALHY-------------GWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcc-------------cHHHHHHHHHHHHHHHHH
Confidence 345677899999999999999999999999999998776543 11111 257777776655444444
Q ss_pred heeeEeeccC
Q 015467 134 VTIYFADEVP 143 (406)
Q Consensus 134 ~Tl~~v~E~p 143 (406)
+..+..||+|
T Consensus 193 ~~~~~~~~~p 202 (434)
T PRK11663 193 FLCWRLRDKP 202 (434)
T ss_pred HHHHHcCCCH
Confidence 4445668865
No 47
>PRK12382 putative transporter; Provisional
Probab=98.54 E-value=1.2e-06 Score=88.02 Aligned_cols=97 Identities=13% Similarity=0.000 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
+..+++...+.+++..++.+|+|+|+...++.++.++++....+.. +.+..++...+.|+
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~ 314 (392)
T PRK12382 255 LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--------------------TAWVALAGAALTGA 314 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--------------------cHHHHHHHHHHHHH
Confidence 4455655667778889999999999888888777766554332221 44555666677788
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
..+.....=.+.+.+..+ ++..|..+|+.|....+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 315 GCSLIFPALGVEVVKRVP--SQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred HHHhHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHH
Confidence 777654332234444433 4567888999988776654
No 48
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.54 E-value=1.8e-06 Score=86.98 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
.+..+.+...+..++..++.+|+++|++..++.++.++++....+.. +.+..++...+.|
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~G 313 (399)
T PRK05122 254 ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--------------------SPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHH
Confidence 34455555666677888999999999988888777766654433322 4455566667788
Q ss_pred hHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 365 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
+..+..+..-.+.+.+..+ ++..|..+|+.|....+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVP--PQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HhHHHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHH
Confidence 8777655333344455444 3567888888887766543
No 49
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.53 E-value=4.8e-06 Score=85.54 Aligned_cols=181 Identities=12% Similarity=0.145 Sum_probs=104.5
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccc-ccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA-SGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~-i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
.+.+.-+++.|..|+++|.+++++.....++|+.++..+.+ ..+.. ...|..|.+.+++.++..
T Consensus 135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------------~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF---------------NDWHAALYFPAICAIIVA 199 (438)
T ss_pred chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh---------------hhhHHHHHHHHHHHHHHH
Confidence 34567788999999999999999999999998888755432 11110 125778888777766666
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCC
Q 015467 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (406)
Q Consensus 133 ~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (406)
++..+.+||+|..+..+... +.+.+.+ ++ ..+++ ++ .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~---------------~~--------~~~~~-~~---~ 236 (438)
T TIGR00712 200 LFAFAMMRDTPQSCGLPPIE----------------EYRNDYP---------------DD--------YNEKA-EQ---E 236 (438)
T ss_pred HHHHHhccCCHHhcCCCCch----------------hcccccc---------------cc--------ccccc-cc---c
Confidence 66667778865321100000 0000000 00 00000 00 0
Q ss_pred chhhHHHHH-HHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHH
Q 015467 213 PGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (406)
Q Consensus 213 ~~~~~~~i~-~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~si 291 (406)
. ..++.+ +.+. -.+.++.+++..++...+++.+..|.+.|.-+ +++-++. .. .+.+..+++
T Consensus 237 -~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~-------------~~-~~~~~~~~~ 298 (438)
T TIGR00712 237 -L-TAKEIFMQYVL-PNKLLWYIAIANVFVYLLRYGVLDWSPTYLKE-VKHFALD-------------KS-SWAYFLYEY 298 (438)
T ss_pred -c-chHHHHHHHHc-cCchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-ccCCChh-------------hH-HHHHHHHHH
Confidence 0 122322 2222 23577888888888888888887788777765 3332332 11 233455666
Q ss_pred HHHHHHHhHHHhhhhcCch
Q 015467 292 VLGVSSFLIEPMCRWIGSR 310 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig~k 310 (406)
...+..++...+.+|++++
T Consensus 299 ~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 299 AGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 7777788888888888643
No 50
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.53 E-value=8.9e-07 Score=91.28 Aligned_cols=86 Identities=10% Similarity=0.066 Sum_probs=58.4
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
+......+..+++.|..|+++|.++.++.+....+|.+++++++... .....+.... ...-|.+|.+.++..+
T Consensus 133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~------~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFI-ARSGDASWLN------TDGWRYMFASEAIPAL 205 (479)
T ss_pred hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccccc------cCChHHHHHHHHHHHH
Confidence 33445567899999999999999999999999999999988876531 1100000000 0136888888776666
Q ss_pred HHhhheeeEeeccC
Q 015467 130 LCALVTIYFADEVP 143 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p 143 (406)
+..++ .+..||.|
T Consensus 206 ~~~~~-~~~l~~s~ 218 (479)
T PRK10077 206 LFLML-LYFVPETP 218 (479)
T ss_pred HHHHH-HHcCCCCc
Confidence 65544 56788875
No 51
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.49 E-value=3.5e-06 Score=84.78 Aligned_cols=178 Identities=17% Similarity=0.253 Sum_probs=103.7
Q ss_pred cccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 015467 51 NNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (406)
Q Consensus 51 ~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~ 130 (406)
.........+++.|..|+++|.+++++......+|..+|..+++. ..+. ...|.+|.+.+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~--l~~~-------------~gwr~~f~~~~~~~~~ 169 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY--LSQE-------------FSWRYTFLLIAVFNIA 169 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH--Hhhh-------------ccHHHHHHHHHHHHHH
Confidence 334445567788999999999999999888888888888877653 1111 1357788887766555
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCC
Q 015467 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (406)
Q Consensus 131 ~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
..+......||.+ ++++.
T Consensus 170 ~~~~~~~~lp~~~---~~~~~----------------------------------------------------------- 187 (382)
T PRK10091 170 VLASIYFWVPDIR---DEAKG----------------------------------------------------------- 187 (382)
T ss_pred HHHHHHHhCCCCC---ccccc-----------------------------------------------------------
Confidence 5554444556642 00000
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHH
Q 015467 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (406)
Q Consensus 211 ~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~s 290 (406)
+ .++-++.+++ +..+.+....+++..+.+.+..|...|..+ .++.+++ ...+-+..++
T Consensus 188 -~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~--------------~~~~~~~~~~ 245 (382)
T PRK10091 188 -G----LREQFHFLRS--PAPWLIFAATMFGNAGVFAWFSYIKPYMMF-ISGFSET--------------SMTFIMMLVG 245 (382)
T ss_pred -C----HHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH--------------HHHHHHHHHH
Confidence 0 0011122222 123334444445444444443344444332 3333321 1234455666
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATT 327 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~ 327 (406)
+...+..++.+++.+|+|+|++...+.++.++++...
T Consensus 246 ~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 246 LGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH
Confidence 7778888889999999999999888877777665433
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.48 E-value=7.6e-06 Score=83.05 Aligned_cols=142 Identities=15% Similarity=0.006 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|.++.+++..++.-.+.+.+..|...|+.+ ++-++. ..| +-+....+...+.+.+..++.+|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~~~-~~~~~~~~~~~ig~~~~g~l~dr~~ 285 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAE--LGFSTS-------------EWL-QIWGTFFFTNIVFNVIFGIVGDKLG 285 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh-------------HHH-HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456677777777777777777777777743 433332 111 2233455667777888899999999
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCC
Q 015467 309 SRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 387 (406)
Q Consensus 309 ~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~ 387 (406)
+|+... ++.+..+++.....+..... ..+.+...+...+.|+..+..... .+++.+.. ++
T Consensus 286 ~~~~~~~~~~l~~~~~~~~l~~~~~~~---------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~---~~ 346 (402)
T TIGR00897 286 WMNTVRWFGGVGCGIFTLALYYIPQHF---------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA---PK 346 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHcc---------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC---cc
Confidence 887653 23232222222111111000 013445556666777766654322 23334432 34
Q ss_pred Ccceeehhhhhhhhcccc
Q 015467 388 GQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 388 ~~G~~mgllN~~i~lpQi 405 (406)
+.|..+|+.|....+++.
T Consensus 347 ~~g~~~g~~~~~~~lg~~ 364 (402)
T TIGR00897 347 HKGAAMSVLNLSAGLSAF 364 (402)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 678999999998877653
No 53
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.48 E-value=3.2e-06 Score=86.38 Aligned_cols=198 Identities=13% Similarity=0.112 Sum_probs=107.9
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccccc-ccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~-d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
.....-+++.|..|+++|.++.++.+...++|.++|..+++.. +...... ...-|.+|.+.++..++..
T Consensus 113 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~----------~~gwr~~f~~~~~~~l~~~ 182 (412)
T TIGR02332 113 FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA----------LKGWQWLFLLEGFPSVILG 182 (412)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC----------ccchhHHHHHHHHHHHHHH
Confidence 3334457789999999999999999999999999998887531 1000000 0135788888766655555
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCccccccccc-CCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCC
Q 015467 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKS-KHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (406)
Q Consensus 133 ~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (406)
.+..+..||.|.....-.+ ..++...+. +.+.. + . ...++ + . +
T Consensus 183 ~~~~~~~~~~p~~~~~l~~----------~~~~~~~~~~~~~~~----------------~--~----~~~~~--~-~-~ 226 (412)
T TIGR02332 183 VMTWFWLDDSPDKAKWLDE----------EDKKALKEMIDNDQL----------------T--L----EQPEG--A-F-A 226 (412)
T ss_pred HHHhhccCCCcccCCCCCH----------HHHHHHHHHHHhccc----------------c--c----ccccc--c-c-c
Confidence 5556677887632110000 000000000 00000 0 0 00000 0 0 0
Q ss_pred CchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHH
Q 015467 212 GPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (406)
Q Consensus 212 ~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~si 291 (406)
......+..++.+++ +.++..+++.++...+++.+..|...|..+ ...+... ...|.. .....+
T Consensus 227 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~s~------------~~~~~~-~~~~~l 290 (412)
T TIGR02332 227 HAAMPQRSMLREIFT--PAIMLYTLAYFCLTNTLSAINIWTPQILQS-FNQGSSN------------IMIGLL-AAIPQF 290 (412)
T ss_pred cccccHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcH------------HHhHHH-hhHHHH
Confidence 000112334555553 447778888888888888888888887754 1111110 122322 445555
Q ss_pred HHHHHHHhHHHhhhhcCchHHH
Q 015467 292 VLGVSSFLIEPMCRWIGSRLVW 313 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig~k~~~ 313 (406)
...+..++..++.+|+++|+..
T Consensus 291 ~~~~g~l~~g~l~dr~~~r~~~ 312 (412)
T TIGR02332 291 CTIFGMIWWSRHSDRLKERKHH 312 (412)
T ss_pred HHHHHHHHHHHHhcccCccHHH
Confidence 6666777888999999877653
No 54
>PRK10504 putative transporter; Provisional
Probab=98.46 E-value=3.7e-06 Score=86.79 Aligned_cols=284 Identities=11% Similarity=0.037 Sum_probs=140.2
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++.........+++.|..|+++|.+++++......+|..+|..+++. ..+. ...|..|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~--l~~~-------------~gw~~~f~~~~~~~ 174 (471)
T PRK10504 110 VGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL--LVEY-------------ASWHWIFLINIPVG 174 (471)
T ss_pred hhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhh-------------ccHHHHHHHHHHHH
Confidence 33344455677889999999999999999998889999998887754 1111 13577888877766
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccch--------hhhccc
Q 015467 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN--------LKHISK 200 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 200 (406)
.++.+++....||.+..+.+. +............-.+. ..++++ +........ ..-+..
T Consensus 175 ~l~~~~~~~~~~~~~~~~~r~----------~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (471)
T PRK10504 175 IIGAIATLMLMPNYTMQTRRF----------DLSGFLLLAVGMATLTL--ALDGSK-GLGLSPLAIAGLVAVGVVALLLY 241 (471)
T ss_pred HHHHHHHHHhCCCccccCCCC----------ChHHHHHHHHHHHHHHH--HHhcCC-cCCcchHHHHHHHHHHHHHHHHH
Confidence 666666665555543221110 00000000000000000 000000 000000000 000000
Q ss_pred cccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhH
Q 015467 201 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (406)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr 280 (406)
..+++.. .++...+ ++++ .|.++.++...++.+++......+.+.|..+ +++.++. .
T Consensus 242 ~~~~~~~---~~~~~~~-~l~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~ 298 (471)
T PRK10504 242 LLHARNN---NRALFSL-KLFR-----TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-GLGFSPF-------------H 298 (471)
T ss_pred HHHHhcC---CCCccCH-HHhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH-------------H
Confidence 0000000 0111111 2222 2567788888888888866554444444432 3332221 1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH
Q 015467 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360 (406)
Q Consensus 281 ~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (406)
. .+-+..+.+...+...+.+++.+|+|+|+++.++.++.+++.....+.. + ..+.+......
T Consensus 299 ~-g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~~~~~~ 360 (471)
T PRK10504 299 A-GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA----------------L-LGWYYLLPFVL 360 (471)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc----------------c-cccHHHHHHHH
Confidence 1 2334555555666667889999999999999888776665433222211 0 00222223334
Q ss_pred HHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 361 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 361 ~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.+.|+..+..+..-.+++.+..+ ++..|..+|+.|...-++
T Consensus 361 ~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~g 401 (471)
T PRK10504 361 FLQGMVNSTRFSSMNTLTLKDLP--DNLASSGNSLLSMIMQLS 401 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--HHhccchHHHHHHHHHHH
Confidence 44555444444433344444333 245666677777665443
No 55
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.43 E-value=6.7e-06 Score=85.93 Aligned_cols=87 Identities=13% Similarity=0.037 Sum_probs=53.4
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++.-....+.-+++.|..|+++|.++.++.+....+|.++|..+.... ...++ .... ....-|..|.++++..
T Consensus 130 ~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~--~~~~~---~~~~--~~~gWR~~f~i~~~~~ 202 (490)
T PRK10642 130 FSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLI--STIVG---EANF--LDWGWRIPFFIALPLG 202 (490)
T ss_pred hHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH--HHhcC---HHHh--cCccHHHHHHHHHHHH
Confidence 344445567788999999999999998888877777777776554320 00000 0000 0012588999987655
Q ss_pred HHHhhheeeEeeccC
Q 015467 129 TLCALVTIYFADEVP 143 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p 143 (406)
+++..+ ....||.|
T Consensus 203 l~~~~~-~~~~~esp 216 (490)
T PRK10642 203 IIGLYL-RHALEETP 216 (490)
T ss_pred HHHHHH-HHcCCCCh
Confidence 544443 44678864
No 56
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.43 E-value=1e-05 Score=83.58 Aligned_cols=179 Identities=12% Similarity=0.154 Sum_probs=98.6
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhh-hhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGN-ILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~-ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
...+.-+.+.|..|+++|+++.++.+...++|+ +.+.+++....+. ...|..|.+.+++.++..
T Consensus 137 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------------~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 137 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF---------------NDWHAALYMPAFAAILVA 201 (452)
T ss_pred cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHH
Confidence 334567788999999999999999888888876 4455543221111 024677777666666655
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCC
Q 015467 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (406)
Q Consensus 133 ~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (406)
++..+..||.|-....++.. + .+.+.+ . ..+++ ++ +
T Consensus 202 ~l~~~~~~~~~~~~~~~~~~-~---------------~~~~~~---------------~---------~~~~~-~~--~- 237 (452)
T PRK11273 202 LFAFAMMRDTPQSCGLPPIE-E---------------YKNDYP---------------D---------DYNEK-HE--Q- 237 (452)
T ss_pred HHHHHHccCCHhhcCCCChh-h---------------hhhccc---------------c---------ccccc-cC--C-
Confidence 66666778865221000000 0 000000 0 00000 00 0
Q ss_pred chhhHHHHHH-HhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHH
Q 015467 213 PGAVLVNLLT-SLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (406)
Q Consensus 213 ~~~~~~~i~~-si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~si 291 (406)
....++.++ .+. -.+.++.+++..++....+..+..|.+.|.-+ .++-++. .. .+...++++
T Consensus 238 -~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-~~g~s~~-------------~~-~~~~~~~~~ 300 (452)
T PRK11273 238 -ELTAKQIFMQYVL-PNKLLWYIAIANVFVYLLRYGILDWSPTYLKE-VKHFALD-------------KS-SWAYFLYEY 300 (452)
T ss_pred -CccHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HH-HHHHHHHHH
Confidence 011233322 122 23667888888888888888888888888765 2332221 11 233445565
Q ss_pred HHHHHHHhHHHhhhhcC
Q 015467 292 VLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig 308 (406)
...+..++...+.+|++
T Consensus 301 ~~~~g~~~~G~l~dr~~ 317 (452)
T PRK11273 301 AGIPGTLLCGWMSDKVF 317 (452)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 66667777888888883
No 57
>PRK09952 shikimate transporter; Provisional
Probab=98.43 E-value=4.8e-06 Score=85.80 Aligned_cols=242 Identities=14% Similarity=0.062 Sum_probs=124.3
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
.++........-+++.|..|+++|.+..+.......+|.+++..+... +...++ .... ....-|..|.++++.
T Consensus 136 G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~--l~~~~~---~~~~--~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 136 GFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL--ISMMTT---DEQF--LSWGWRIPFLFSIVL 208 (438)
T ss_pred HhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HHHh--hccChHHHHHHHHHH
Confidence 445555556677899999999999888888888888888887554432 111110 0000 001357888887765
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCC
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (406)
.++...+ -...||.|-...+ .. +++ +
T Consensus 209 ~l~~~~l-~~~~~es~~~~~~-~~--------------------------------------------------~~~--~ 234 (438)
T PRK09952 209 VLIALWV-RNGMEESAEFEQQ-QH--------------------------------------------------EQA--A 234 (438)
T ss_pred HHHHHHH-HHhCCCChhHHHH-Hh--------------------------------------------------hcc--c
Confidence 5443322 1233443210000 00 000 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHH
Q 015467 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (406)
Q Consensus 208 ~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~ 287 (406)
. +..... .+.+++-|+..+.+....++.+.+++.+..|...|..+ .++-+++ .....++
T Consensus 235 ~--~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~g~s~~-------------~~~~~~~- 293 (438)
T PRK09952 235 A--KKRIPV----IEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ-NLGLPRE-------------LFLNIGL- 293 (438)
T ss_pred c--cccCCH----HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HHHHHHH-
Confidence 0 000111 12233345555554445565566666665566556544 2332211 1112222
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 367 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~w 367 (406)
+..+...+...+..++.+|+|+|++...+.++.++++....+.. .. .++.+.+++...+.|+..
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL-EA---------------QSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-Hc---------------CChHHHHHHHHHHHHHHH
Confidence 23445566667788999999999998877665544332222111 00 002333344445557777
Q ss_pred HHHhhchhhhhhcccccCCC
Q 015467 368 AITYSVPFAITAELTADSGG 387 (406)
Q Consensus 368 A~~~siPfaLl~~~~~~~~~ 387 (406)
+....+-+++++|..+.+.|
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r 377 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYR 377 (438)
T ss_pred HHHHHHHHHHHHHHCCcchh
Confidence 77666677888887664334
No 58
>PRK10054 putative transporter; Provisional
Probab=98.40 E-value=3.3e-06 Score=85.81 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=50.0
Q ss_pred hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 015467 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (406)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl 136 (406)
..++++.|..|+++|.+++++......+|.++|..+++.. .+ . ..+..|.+.+++.+++.+...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l--~~-~-------------g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 116 VLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL--VM-Q-------------SINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-h-------------ccCcHHHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999999999998887641 11 1 134566666666666555444
Q ss_pred eEeecc
Q 015467 137 YFADEV 142 (406)
Q Consensus 137 ~~v~E~ 142 (406)
+..||.
T Consensus 180 ~~~~~~ 185 (395)
T PRK10054 180 IWVQRS 185 (395)
T ss_pred HHHhcc
Confidence 445553
No 59
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.40 E-value=3.4e-06 Score=92.72 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
.++.++..++..++...+.+|+|||++.+++.++.+++++...+.. +....+++..+.|+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--------------------s~~~ll~~~~l~g~ 660 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--------------------SESAMIALLCLFGG 660 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHHHH
Confidence 3445566677778888999999999999999888887766544432 33344455556677
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
..+....+.++++++..+.+. .|+.+|+.+...-+
T Consensus 661 ~~~~~~~~~~a~~aEl~Pt~~--Rgta~Gi~~~~~rl 695 (742)
T TIGR01299 661 LSIAAWNALDVLTVELYPSDK--RATAFGFLNALCKA 695 (742)
T ss_pred HHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHH
Confidence 666666777888888876533 34446666655433
No 60
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.38 E-value=1.6e-05 Score=80.40 Aligned_cols=239 Identities=11% Similarity=0.083 Sum_probs=123.7
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
....-+++.|..|++++.+++++......+|..+|-.+++. +.+.. ..|..|.+.+++.+++.+.
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~~-------------~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 119 GAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA--LIHVL-------------PWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcc-------------CccHHHHHHHHHHHHHHHH
Confidence 34567888999999999888888877777788887776543 11111 1356666655555555554
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCch
Q 015467 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (406)
Q Consensus 135 Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (406)
.....||++....+ + .+. ++..
T Consensus 184 ~~~~~~~~~~~~~~------------------------------------------------------~---~~~-~~~~ 205 (406)
T PRK15402 184 LWRAMPETAGRVGE------------------------------------------------------K---LSL-KELG 205 (406)
T ss_pred HHHhCCCCCccccc------------------------------------------------------c---ccH-HHHH
Confidence 44445664210000 0 000 0001
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHH
Q 015467 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (406)
Q Consensus 215 ~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~ 294 (406)
..++++++ = +.++.+++..++...+...+..+...|.-+ .++.++ . ..|.. .....+...
T Consensus 206 ~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~---------~----~~g~~-~~~~~~~~~ 265 (406)
T PRK15402 206 RDYKLVLK----N-RRFVAGALALGLVSLPLLAWIALSPVILIS-GEQLSS---------Y----EYGLL-QVPVFGALI 265 (406)
T ss_pred HHHHHHHc----C-cHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCCH---------H----HHHHH-HHHHHHHHH
Confidence 12222222 2 345666666555544444333333333222 232221 1 22222 122233455
Q ss_pred HHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhch
Q 015467 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 374 (406)
Q Consensus 295 v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siP 374 (406)
+.+++..++.+|+++|++..++.++.++++....+.... ...+.+..++...+.|+..+......
T Consensus 266 ~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~g~~~~~~~~ 330 (406)
T PRK15402 266 AGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI---------------SSHAYLWLTAGLSLYAFGIGLANAGL 330 (406)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc---------------ccccHHHHHHHHHHHHHHHHHHhhhH
Confidence 667788999999999998888877666555433322100 00133444555666777666654433
Q ss_pred hhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 375 FAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 375 faLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.+.. .... +++.|...|+.|+...+.|
T Consensus 331 ~~~~-~~~~--~~~~g~~~~~~~~~~~~~~ 357 (406)
T PRK15402 331 YRLT-LFSS--DVSKGTVSAAMGMLSMLIF 357 (406)
T ss_pred HHHH-hhhc--cccccHHHHHHHHHHHHHH
Confidence 3332 2222 2567888888877665543
No 61
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.38 E-value=8.8e-06 Score=82.16 Aligned_cols=139 Identities=9% Similarity=0.065 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|.++.+++..++.+..+..+..+...|..+ .++ +++.+ .. ..| +...+.+++..+..+..+++.||+|
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~-~~~-~~~~~-----~~----~~g-~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTS-FFA-TPQQG-----TR----VFG-YVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-ccccc-----hH----HHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456667777776666555443333444433 121 11100 00 112 2233445566667778899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|++..++.+++++.+....+.. +++..++...+.|+.....+..-...+.+..+ +|.
T Consensus 283 ~~~~l~~~~~l~~l~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--~~~ 340 (396)
T TIGR00882 283 AKNALLIAGTIMSVRIIGSSFAT--------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFD--VRL 340 (396)
T ss_pred cchhHHHHHHHHHHHHHHHHhcC--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--cce
Confidence 99998888777765544322211 55555666666677665554444444443322 455
Q ss_pred cceeehh-hhhhhh
Q 015467 389 QGLAIGV-LNLAIV 401 (406)
Q Consensus 389 ~G~~mgl-lN~~i~ 401 (406)
.++..+. .|....
T Consensus 341 ~at~~~~~~~~~~~ 354 (396)
T TIGR00882 341 SATIYLIGFQFAKQ 354 (396)
T ss_pred EEEeehHHHHHHHH
Confidence 5665555 555433
No 62
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.37 E-value=7.6e-06 Score=83.04 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=37.9
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccc
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 94 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~ 94 (406)
++.........+++.|..|+++|.+++++.....++|.+++..++.
T Consensus 118 ~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~ 163 (426)
T PRK12307 118 MGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMP 163 (426)
T ss_pred HHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHH
Confidence 4445566678899999999999999999999989999998866543
No 63
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.37 E-value=2.5e-05 Score=80.05 Aligned_cols=77 Identities=6% Similarity=0.074 Sum_probs=47.2
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
+.-.......+++.|..|+++|.++.++.......|.+++.+++.+ ....++ +... ....-|..|.++++..+
T Consensus 137 g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~---~~~~--~~~gWr~~F~i~~~~~l 209 (432)
T PRK10406 137 SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV--LQQTLE---DAEL--REWGWRIPFALGAVLAV 209 (432)
T ss_pred hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HHHH--hccchHHHHHHHHHHHH
Confidence 3344556678999999999999998888777667777777655432 111110 0000 00135888988777655
Q ss_pred HHhh
Q 015467 130 LCAL 133 (406)
Q Consensus 130 ~~~~ 133 (406)
+...
T Consensus 210 l~~~ 213 (432)
T PRK10406 210 VALW 213 (432)
T ss_pred HHHH
Confidence 5443
No 64
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.34 E-value=1.5e-05 Score=80.66 Aligned_cols=123 Identities=10% Similarity=0.033 Sum_probs=81.7
Q ss_pred hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 015467 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (406)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl 136 (406)
+.-+.+.|..|+++|.++.++......+|++++..++... .... .-|..|.+.+++-++..++..
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l--~~~~-------------gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI--YTAG-------------GLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHcc-------------chHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999999999999999999999888652 1111 247778775555444455555
Q ss_pred eEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchhh
Q 015467 137 YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAV 216 (406)
Q Consensus 137 ~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (406)
..+||.|....+ . .+ . ++..+.
T Consensus 163 ~~lp~~p~~~~~--~---------------------------------------------------~~--~---~~~~~~ 184 (368)
T TIGR00903 163 AALPALPFQAAE--G---------------------------------------------------FG--F---KDAVKE 184 (368)
T ss_pred HHcCCCCCCCCC--C---------------------------------------------------cc--h---HHHHHH
Confidence 577886421100 0 00 0 000112
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccc
Q 015467 217 LVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMG 257 (406)
Q Consensus 217 ~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg 257 (406)
++++++. +.++.+++..++...+++.+..+..+|.-
T Consensus 185 ~~~ll~~-----~~~~~~~~~~~~~~~~~~~~~~wlp~~L~ 220 (368)
T TIGR00903 185 FGALAGR-----KDLWIIGAILGFGVALFDNLAIWLEAALR 220 (368)
T ss_pred HHHHHcC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 77899999999999999999888777773
No 65
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.34 E-value=5.4e-06 Score=85.61 Aligned_cols=182 Identities=12% Similarity=0.128 Sum_probs=100.6
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
+.-.......+++.|..|+++|.+++++......+|.++|..+++..-+. .. ..|..|.+.+++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~-~~-------------gw~~~f~i~~~~~~ 209 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES-WG-------------GWPMIFYVFGIVGC 209 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cC-------------CCCeehhhhhHHHH
Confidence 33344456778999999999999999999999999999998886541111 00 13556666555544
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCC
Q 015467 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (406)
+..++.....+|.|-..++.++ .+++.. + +..+++.++
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~~----------~~~~~i----------------------------~---~~~~~~~~~- 247 (465)
T TIGR00894 210 AWSLLWFVFPADDPSIHPCISK----------FEKKYI----------------------------N---SSLQGQKGS- 247 (465)
T ss_pred HHHHHHHHHhcCCcccCCCCCH----------HHHHHH----------------------------H---hhcccccCC-
Confidence 4444444455665421111000 000000 0 000000000
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHH
Q 015467 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (406)
Q Consensus 210 ~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~ 289 (406)
......++++++. +.++.+++.+++...+++.+..|...|..+ .++-++. ..|-. ..+.
T Consensus 248 -~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~~-------------~~g~~-~~~~ 306 (465)
T TIGR00894 248 -TRQSLPIKAIPKS-----LPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVSGK-------------ENGLL-SSLP 306 (465)
T ss_pred -CCCCCCHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcChH-------------HhHHH-HHHH
Confidence 0011235555544 678899999999988988888888888866 5544432 12222 2233
Q ss_pred HHHHHHHHHhHHHhhhhcC
Q 015467 290 SVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 290 siv~~v~s~~l~~l~~~ig 308 (406)
.+...+.+++..++.+|++
T Consensus 307 ~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555566665543
No 66
>PRK15075 citrate-proton symporter; Provisional
Probab=98.33 E-value=2.2e-05 Score=80.51 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=32.4
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccc
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 94 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~ 94 (406)
..+..+++.|..|+++|.++.++.+....+|..+|..+|.
T Consensus 135 ~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 135 LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999999988877777776666654
No 67
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.32 E-value=1.9e-05 Score=79.56 Aligned_cols=145 Identities=8% Similarity=-0.024 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHH-HHHHHHHhHHHhhhhc
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV-VLGVSSFLIEPMCRWI 307 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~si-v~~v~s~~l~~l~~~i 307 (406)
|.++.++...++...+...+..+.+.|.-+ . +-+++ ..|.. +....+ ...+..++.+++.||+
T Consensus 208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~-G~s~~-------------~ig~~-~~~~~~~~~~~g~~~~g~l~~r~ 271 (390)
T TIGR02718 208 PLAWSLLALALLSAMTAVSGFGLSKLYLVD-A-GWPLE-------------WIGRL-GMAGGAVTVLLGCGGGAWLVRRA 271 (390)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-c-CCCHH-------------HHHHH-HhHHHHHHHHHHHHHHHHHHHHh
Confidence 346777777777777777776666666644 2 22221 22222 222222 3334467789999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCC
Q 015467 308 GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 387 (406)
Q Consensus 308 g~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~ 387 (406)
|+|++..++.++.++........... ...+ +.........+.|+..+.....-++.+.++.++ ++
T Consensus 272 g~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 336 (390)
T TIGR02718 272 GLWRTFILGVGLAGSLALLWFAQAAF-----------WLAP---GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGD-GD 336 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-----------ccCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-cc
Confidence 99998887766553322211111100 0001 222333333444555666655555565565432 35
Q ss_pred Ccceeehhhhhhhhccc
Q 015467 388 GQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 388 ~~G~~mgllN~~i~lpQ 404 (406)
..|+++|+.|....++.
T Consensus 337 ~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 337 QAGTDVTAVQSTRDLGE 353 (390)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 67888898888766543
No 68
>PRK11043 putative transporter; Provisional
Probab=98.32 E-value=3.5e-05 Score=77.75 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
+..+.+...+.+++..++.+|+++|++.....+..+++.+...+..... . + +.+..++...+.|+
T Consensus 244 ~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~---~~~~~~~~~~~~~~ 308 (401)
T PRK11043 244 YVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--H----------P---SLVPLLIPFCVMAA 308 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc--c----------C---cHHHHHHHHHHHHH
Confidence 3445555556666777888999988876666555555544333322110 0 1 33444555667777
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
..+..+.+-.+...+.. ++..|..+|+.|..
T Consensus 309 ~~~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~ 339 (401)
T PRK11043 309 ANGAIYPIVVAQALRPF---PQATGKAAALQNTL 339 (401)
T ss_pred HHHHHHHHHHHHHhhhC---cccChHHHHHHHHH
Confidence 77776666555544433 24567788888864
No 69
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.31 E-value=1.7e-05 Score=79.86 Aligned_cols=73 Identities=21% Similarity=0.193 Sum_probs=47.4
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
..-.++++.|..+++++..++++.+....+|..+|..+++. ..+.. ..|..|.+.++..++..++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~~-------------g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 114 GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL--LTTLF-------------GWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcc-------------ChHHHHHHHHHHHHHHHHH
Confidence 34456788899999999999999888888888888777653 11111 1456666655444443333
Q ss_pred eeeEeecc
Q 015467 135 TIYFADEV 142 (406)
Q Consensus 135 Tl~~v~E~ 142 (406)
..+..||.
T Consensus 179 ~~~~~~~~ 186 (394)
T PRK11652 179 MARWMPET 186 (394)
T ss_pred HHHhCCcc
Confidence 34456775
No 70
>PRK10133 L-fucose transporter; Provisional
Probab=98.31 E-value=3e-05 Score=80.10 Aligned_cols=132 Identities=13% Similarity=0.047 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k 310 (406)
++...+..++.-.+......|...|+-+++++-+|. ...+.+..+.+...+.+++..++.+|+|+|
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~--------------~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~ 325 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAG--------------FAANYLTGTMVCFFIGRFTGTWLISRFAPH 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 344445555555555555555555643334443332 234567777777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcc
Q 015467 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 390 (406)
Q Consensus 311 ~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G 390 (406)
++...+.++.++++....+ . + +. ..+..+.++|+..+.+.-.=|++..+..+ +..|
T Consensus 326 ~~l~~~~~~~~~~~~~~~~-~----------------~---~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~---~~~~ 381 (438)
T PRK10133 326 KVLAAYALIAMALCLISAF-A----------------G---GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLG---QDTK 381 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH-c----------------C---Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccc---hhhc
Confidence 9988776665544332221 1 1 11 23556777888888888888888777643 3345
Q ss_pred eeehhhhhhh
Q 015467 391 LAIGVLNLAI 400 (406)
Q Consensus 391 ~~mgllN~~i 400 (406)
...|+.+++.
T Consensus 382 ~as~l~~~~~ 391 (438)
T PRK10133 382 YGSSFIVMTI 391 (438)
T ss_pred cchhHHhHHh
Confidence 6666665543
No 71
>PRK03699 putative transporter; Provisional
Probab=98.26 E-value=2.7e-05 Score=78.70 Aligned_cols=136 Identities=11% Similarity=0.068 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.++.+++..++.-.+.+.+..|...|+.+ .++-++. +.| +-...+.+...+..++..++.||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~-------------~~~-~~~~~~~~~~~ig~~~~g~l~dr~~ 269 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQK-KFGMSLE-------------DAG-NLVSNFWMAYMVGMWIFSFIVRFFD 269 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChH-------------Hhh-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455666666666666666676777777654 4554443 111 2233444456667777888999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|++......+.++++....+. + +.....+.+.+.|+..+.......+...+..++ .
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~-----------------~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~---~ 326 (394)
T PRK03699 270 LQRILTVLAGLALVLMYLFVNT-----------------D---DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV---A 326 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHc-----------------C---CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---C
Confidence 9988776655444332211111 1 334445556667777766666555555554332 1
Q ss_pred cceeehhhhhhhhc
Q 015467 389 QGLAIGVLNLAIVI 402 (406)
Q Consensus 389 ~G~~mgllN~~i~l 402 (406)
.+...|..+.+..+
T Consensus 327 ~~~~~g~~~~~~~~ 340 (394)
T PRK03699 327 SPKLVNFILTCGTI 340 (394)
T ss_pred CHHHHHHHHHhhhH
Confidence 23334555544433
No 72
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.26 E-value=1.4e-05 Score=82.79 Aligned_cols=256 Identities=13% Similarity=0.097 Sum_probs=136.5
Q ss_pred ccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 015467 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (406)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~ 131 (406)
.....|.-+++.|..| ++|.++.++.....++|+.++-.+++. .... ...|..|.+.+++.+++
T Consensus 123 ~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~--l~~~-------------~gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 123 AFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY--LFES-------------FGWRGSFLILGGLLLHC 186 (455)
T ss_pred hhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH--HHHH-------------hChHHHHHHHHHHHHHH
Confidence 3334566788888885 788999999998888888777655542 1111 12678888877766665
Q ss_pred hhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCC
Q 015467 132 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (406)
Q Consensus 132 ~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (406)
.+..++..++++....++.+ ++ +...++ +.. .+.+.+..
T Consensus 187 ~v~~~~~~~~~~~~~~~~~~-~~-~~~~~~---------------------~~~----------------~~~~~~~~-- 225 (455)
T TIGR00892 187 CVCGALMRPVGPSQRVSKSK-SK-EGLPPD---------------------GST----------------KKLSKKST-- 225 (455)
T ss_pred HHHHHHhCCCCccccccccc-cc-ccCCCC---------------------Ccc----------------ccccccch--
Confidence 55444343332211000000 00 000000 000 00000000
Q ss_pred CchhhHHHH--HHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHH
Q 015467 212 GPGAVLVNL--LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (406)
Q Consensus 212 ~~~~~~~~i--~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~ 289 (406)
....++. ++.+++ +.++..+...++..++++....|...|..+ ++.++ .+. .+.+.+.
T Consensus 226 --~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~g~s~---------~~~-----g~~~~~~ 285 (455)
T TIGR00892 226 --AEKINRFLDFSLFTH--RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD--KGVDE---------YEA-----AFLLSII 285 (455)
T ss_pred --hhhhhhhcchHHhcC--chHHHHHHHHHHHHHHccchHHHHHHHHHH--cCCCH---------HHH-----HHHHHHH
Confidence 0001111 122222 457777777888888877777777766533 22221 111 2334445
Q ss_pred HHHHHHHHHhHHHhhhh--cCchHHHHH--HHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 290 SVVLGVSSFLIEPMCRW--IGSRLVWAI--SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 290 siv~~v~s~~l~~l~~~--ig~k~~~~~--s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
++...+...+...+.+| ++.|+...+ +.++.+++++...+.. +.+..++...+.|+
T Consensus 286 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--------------------~~~~~~i~~~~~G~ 345 (455)
T TIGR00892 286 GFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--------------------DYTGLVIYCIFFGL 345 (455)
T ss_pred HHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--------------------hHHHHHHHHHHHHH
Confidence 55566666666677665 334443333 2233332222111111 45566677888899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccccC
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQVS 406 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi~ 406 (406)
.++......++++.+..+ ++..|..+|+.|....++|++
T Consensus 346 ~~g~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~lg~~i 384 (455)
T TIGR00892 346 SFGSVGALLFEVLMDLVG--AQRFSSAVGLVTIVECCAVLI 384 (455)
T ss_pred HhchHHHHHHHHHHHHhh--HHHHhhHHhHHHHHHHHHHHc
Confidence 998888888999888765 356788888888887777653
No 73
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.23 E-value=1.2e-05 Score=83.38 Aligned_cols=257 Identities=8% Similarity=0.064 Sum_probs=131.8
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~ 133 (406)
...+.-+++.|..|+++|.++.++.....++|+++|..+... -+...++ ...+..|.+.+++.++..+
T Consensus 139 ~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~-~~~~~~~-----------~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 139 GGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALW-GANYFFD-----------GHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred cchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHH-HHHhhcc-----------CcchhHHHHHHHHHHHHHH
Confidence 344556899999999999999999999889999998766532 1211110 1234455554433333333
Q ss_pred heeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCc
Q 015467 134 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 213 (406)
Q Consensus 134 ~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (406)
+..+.+|+.|-.....+. ++ ..+++ . .. ..+++ + +.+
T Consensus 207 ~~~~~~~~~p~~~~~~~~--~~--~~~~~------------------------------~--~~---~~~~~-~---~~~ 243 (467)
T PRK09556 207 IGLRYGSDSPEELGWGKA--EE--IFGEP------------------------------I--SE---EDKET-E---STD 243 (467)
T ss_pred HHHHhCCCChhhcCCCCh--hh--cccCc------------------------------c--ch---hhhcc-c---ccc
Confidence 334455654321100000 00 00000 0 00 00000 0 000
Q ss_pred hhhHHHHH-HHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHH
Q 015467 214 GAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (406)
Q Consensus 214 ~~~~~~i~-~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv 292 (406)
. ..++.+ +...+ .+.++.+++..++.-.++..+..+...|.-+ .++-++. .. .+.+....+.
T Consensus 244 ~-~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-~~g~s~~-------------~a-~~~~~~~~~~ 306 (467)
T PRK09556 244 M-TKWQIFVEYVLK-NPVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-ELGFSKE-------------DA-INTFTLFEIG 306 (467)
T ss_pred C-cHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH-------------HH-HHHHHHHHHH
Confidence 0 112221 11111 2567888888888777777777777777654 4554432 11 2334455566
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
..+.+++...+.+|+++|+....+..+..++.....+ . . . .+.+.+.+...+.|+.......
T Consensus 307 ~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~-~-~--~--------------~~~~~~~~~~~~~G~~~~~~~~ 368 (467)
T PRK09556 307 ALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY-Q-H--A--------------TSEYMYLASLFALGFLVFGPQL 368 (467)
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH-H-h--c--------------CcHHHHHHHHHHHHHHHhhHHH
Confidence 7778888899999999887765544333322111111 1 0 0 0334444555566653322222
Q ss_pred chhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 373 VPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 373 iPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
..++.+.+..+ ++..|+.+|+.|....+
T Consensus 369 ~~~~~~~~~~p--~~~~g~a~gi~~~~g~l 396 (467)
T PRK09556 369 LIGVAAVGFVP--KKAIGVANGIKGTFAYL 396 (467)
T ss_pred HHHHHHHhhcc--hhhHHHHHHHHHHHHHH
Confidence 22344445544 35678889999877654
No 74
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.20 E-value=7.2e-05 Score=76.52 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=53.8
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
.....+++.|..|++++.++.++.+...++|.++|-.+|+.. .+.. ..|..|.+.+++.+++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l--~~~~-------------gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 122 ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL--MHFV-------------HWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------------CHHHHHHHHHHHHHHHHHH
Confidence 445678899999999999999999999999999998888641 1111 2577888777666666655
Q ss_pred eeeEeecc
Q 015467 135 TIYFADEV 142 (406)
Q Consensus 135 Tl~~v~E~ 142 (406)
.....||.
T Consensus 187 ~~~~lp~~ 194 (413)
T PRK15403 187 LLLAMPET 194 (413)
T ss_pred HHHhCCCC
Confidence 55566775
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.18 E-value=2.2e-05 Score=79.92 Aligned_cols=92 Identities=10% Similarity=0.031 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
+.++.+...+..++.+++.+|+|+|+...++.++.+++++...+.. +++.......+.|+
T Consensus 268 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--------------------~~~~~~~~~~l~g~ 327 (420)
T PRK09528 268 NSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--------------------GPLEVSILKLLHAF 327 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--------------------cHHHHHHHHHHHHH
Confidence 3444555566777889999999999998888777776555433322 55666666677777
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehh-hhhh
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGV-LNLA 399 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgl-lN~~ 399 (406)
..+......+..+.++.++ +..++..++ .|..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~ 360 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDV--RLSATIYLVGFQFA 360 (420)
T ss_pred HHHHHHHHHHHHHHHHcCc--cceeeeeeehHHHH
Confidence 7777666666676766553 344544443 4543
No 76
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.17 E-value=3.6e-05 Score=78.38 Aligned_cols=184 Identities=20% Similarity=0.238 Sum_probs=125.3
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
-++.-....-.-++..|++||+||.+|-++...=..++.++|-=+|.. ..++++ -|..|.+.+.+
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~--ig~~~G-------------WR~~F~~ia~l 176 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF--LGQLFG-------------WRATFLAIAVL 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH--HHHHhh-------------HHHHHHHHHHH
Confidence 345555666777889999999999999888766555555555444432 111111 26777777777
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCC
Q 015467 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (406)
-+++.+.-....| | .+..+
T Consensus 177 ~ll~~~~~~~~lP--~---~~~~~-------------------------------------------------------- 195 (394)
T COG2814 177 ALLALLLLWKLLP--P---SEISG-------------------------------------------------------- 195 (394)
T ss_pred HHHHHHHHHHhCC--C---ccCCC--------------------------------------------------------
Confidence 6667666665666 1 11100
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHH
Q 015467 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (406)
Q Consensus 208 ~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~ 287 (406)
.+...+++.++.++ .+.++...++.++.-.|.|....|..+|..+ +.+-+++ .-+|.|+
T Consensus 196 ----~~~~~~~~~~~~l~--~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-v~g~s~~--------------~vs~~Ll 254 (394)
T COG2814 196 ----SLPGPLRTLLRLLR--RPGVLLGLLATFLFMTGHFALYTYIRPFLES-VAGFSVS--------------AVSLVLL 254 (394)
T ss_pred ----CCCcchhHHHHHhc--CchHHHHHHHHHHHHcchhhhHHhHHHHHHH-ccCCCHh--------------HHHHHHH
Confidence 00112333344433 2677888889999999999999999999987 6654432 2378999
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~ 329 (406)
.|.+...+-+.+-.++.+| +.|+......++.++.+....+
T Consensus 255 ~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 255 AFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF 295 (394)
T ss_pred HHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999 8888888887887776665333
No 77
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.17 E-value=2.2e-05 Score=80.00 Aligned_cols=258 Identities=13% Similarity=0.078 Sum_probs=150.9
Q ss_pred HHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccc------c-ccccccccccccchhhhcc
Q 015467 41 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG------A-SGSWHRWFPFLTSRACCAA 113 (406)
Q Consensus 41 v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g------~-i~d~~~~~~~~~~~~~~~~ 113 (406)
++.+.+.+.+.+..+.+.-|++.|+.++++-.+..+..=-+.-+|+++-.+++ + -.-+... .+.- .+.-
T Consensus 119 l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~--l~~l--~~~~ 194 (438)
T COG2270 119 LLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITII--LLGL--PPAD 194 (438)
T ss_pred HHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEE--eecc--Cccc
Confidence 44445568899999999999999999997655443222222223333222221 0 0001111 0000 0123
Q ss_pred cchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccc
Q 015467 114 CGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDA 193 (406)
Q Consensus 114 ~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
+...|..+.++++-.++-.+..+..+|+.+.....
T Consensus 195 ~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~--------------------------------------------- 229 (438)
T COG2270 195 GEDVRITGLLAALWWLLFALPMILNVHDAEKISSP--------------------------------------------- 229 (438)
T ss_pred cccchhHHHHHHHHHHHHHhHHHhccccccccccc---------------------------------------------
Confidence 45789999999999999999999999886421100
Q ss_pred hhhhccccccccCCCCCCCchhhHHHHHHHhccCC--HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchh
Q 015467 194 NLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLP--PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHE 271 (406)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP--~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~ 271 (406)
..+...+.+++++.++++.- +.+.+-.+.-|+=-=|..+.+.+.+.|-.. .||=.
T Consensus 230 ---------------~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~-~~gls------- 286 (438)
T COG2270 230 ---------------PPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA-DLGLS------- 286 (438)
T ss_pred ---------------chHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH-HcCcc-------
Confidence 00111234455544444332 356665555555555555555555543221 23211
Q ss_pred hHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcch
Q 015467 272 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA 351 (406)
Q Consensus 272 ~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 351 (406)
-..++-+|+..+ +++++.+++.|++.+|+|.|++..++.++..+..+...+..
T Consensus 287 ------~~~lll~g~~~~-vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~-------------------- 339 (438)
T COG2270 287 ------STELLLIGIALS-VVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE-------------------- 339 (438)
T ss_pred ------HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--------------------
Confidence 125556666554 47888999999999999999998888776543322222221
Q ss_pred hhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 352 IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 352 ~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
......++--++|...+-.++.-=+.+++..+ +++.|.+.|++|+.
T Consensus 340 ~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp--~~k~~~fFglyalt 385 (438)
T COG2270 340 GELDFWILGLLVGTSLGGAQASSRSYLARLVP--KGKEGRFFGLYALT 385 (438)
T ss_pred ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCC--Cccccceeehhhhh
Confidence 12333344456677777777777777888776 57889999999875
No 78
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.13 E-value=2.1e-05 Score=79.72 Aligned_cols=136 Identities=9% Similarity=0.060 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
..+.+++..++...+++.+..|...|..+ ++-++. ..| .-+.++++...+.+++..++.||+++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~s~~-------------~ag-~~~~~~~i~~i~g~~~~g~l~~r~~~ 269 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE--IGASAQ-------------YSG-SLLALMTLGQAAGALLMPAMARHQDR 269 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh-------------hhh-HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34556666666667777777777777644 332322 112 23556777777888888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCc
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
|++..++.++.++++....+.. + +..... ..+.|+..+.......+...++.++ ++..
T Consensus 270 ~~~~~~~~~l~~~~~~~~~~~~----------------~---~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~ 327 (393)
T PRK09705 270 RKLLMLALVLQLVGFCGFIWLP----------------L---QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQ-PAIA 327 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHcc----------------c---hHHHHH--HHHHHHhccchHHHHHHHHHhhcCC-HHHH
Confidence 9988887666555443222111 0 111122 2344665555544444444444321 2345
Q ss_pred ceeehhhhhhhhcc
Q 015467 390 GLAIGVLNLAIVIP 403 (406)
Q Consensus 390 G~~mgllN~~i~lp 403 (406)
|..+|+.|....+.
T Consensus 328 g~~~g~~~~~~~~~ 341 (393)
T PRK09705 328 GKLVAFMQGIGFII 341 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777665543
No 79
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.12 E-value=0.00017 Score=71.16 Aligned_cols=247 Identities=11% Similarity=0.044 Sum_probs=135.4
Q ss_pred hhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccc-hhhhcccch
Q 015467 38 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTS-RACCAACGN 116 (406)
Q Consensus 38 ~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~-~~~~~~~~q 116 (406)
...++++.++-.++-.+|.-.-+|+.|+-|+|++.+..++...+.++|.++|-++++..-.......... ......-.+
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAK 90 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHH
Confidence 3456677777778888888888999999999989999999999999999999888764110000000000 000000124
Q ss_pred hHHHHH-HHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchh
Q 015467 117 LKAAFL-VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANL 195 (406)
Q Consensus 117 ~~~~f~-i~ai~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (406)
.|..|+ +++++.++.+++.....||.. ++++++
T Consensus 91 ~~~~yl~ia~~~~~~~i~~~~~~~p~~~--~~~~~~-------------------------------------------- 124 (310)
T TIGR01272 91 VHTPYLLLAGALAVLAIIFAFLPLPELQ--EADVAR-------------------------------------------- 124 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCC--cccccc--------------------------------------------
Confidence 677777 455555555555444445531 101000
Q ss_pred hhccccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccee-eecCCCCCCchhhHh
Q 015467 196 KHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKF 274 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~-Vy~gdp~a~~~~~~~ 274 (406)
..++ +. .+ .+++++ - +.++...+.+|+-=-+..++.-+...|+.+. .++-++
T Consensus 125 -----~~~~--~~--~~----~~~~~~----~-~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~--------- 177 (310)
T TIGR01272 125 -----VSSG--DT--TQ----KTSAFQ----F-THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPE--------- 177 (310)
T ss_pred -----cccc--cc--cc----hhhHHh----h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCH---------
Confidence 0000 00 00 011222 1 2333334444443335667777777777542 233232
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhH
Q 015467 275 YDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKV 354 (406)
Q Consensus 275 y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
....+....+.....+-.++..++.+|+|.|++..++.++..+++. +.... + . .
T Consensus 178 -----~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~---l~~~~--------------~---~-~ 231 (310)
T TIGR01272 178 -----DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI---GAALT--------------H---G-Y 231 (310)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH---HHHHc--------------C---C-H
Confidence 2234446667767777788889999999988876666555443332 11110 0 1 1
Q ss_pred HHHHHHHHhhhHHHHHhhchhhhhhcccc
Q 015467 355 ASLVVFTLLGFPLAITYSVPFAITAELTA 383 (406)
Q Consensus 355 ~~~~l~~~~Gi~wA~~~siPfaLl~~~~~ 383 (406)
.....+.++|+..+.++-.=+++..+..+
T Consensus 232 ~~~~~~~l~g~~~s~i~P~~~s~a~~~~~ 260 (310)
T TIGR01272 232 VAMWFVLALGLFNSIMFPTIFSLALNALG 260 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22334556777777777666777666543
No 80
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.12 E-value=4.5e-05 Score=79.09 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=39.3
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
++.........+++.|..|+++|.+++++......+|+++|..+++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 120 MGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567778899999999999999999999999999999887754
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.10 E-value=5.4e-05 Score=75.08 Aligned_cols=135 Identities=10% Similarity=0.083 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhc-
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI- 307 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~i- 307 (406)
+.++.+++..++.+.+++.+..|...|+.+ ++.++. ....-+..+.+...+..++..++.+|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~~~--------------~~g~~~~~~~~~~i~~~~~~g~l~dr~~ 260 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGASAA--------------TAGSLLALMQLAQAASALLIPALARRVK 260 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH--------------HHHHHHHHHHHHHHHHHHhHHHHHhhhc
Confidence 455666667777777777776666666643 233322 122334556667777888889999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCC
Q 015467 308 GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 387 (406)
Q Consensus 308 g~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~ 387 (406)
++|++..++.++.++++....+.. +... .....+.|+..+.....-.+.+.+..++ ++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~l~g~~~g~~~~~~~~~~~~~~~~-~~ 318 (355)
T TIGR00896 261 DQRGIVAVLAVLQLVGLCGLLFAP--------------------MHGL-WAWALVLGLGQGGAFPLALTLIGLRSRQ-AA 318 (355)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhh--------------------hhHH-HHHHHHHHHhhhhHhHHHHHHHHHhccC-HH
Confidence 556666666666665544333221 1111 1234567887777665544555443322 34
Q ss_pred Ccceeehhhhhhhh
Q 015467 388 GQGLAIGVLNLAIV 401 (406)
Q Consensus 388 ~~G~~mgllN~~i~ 401 (406)
..|..+|+.+....
T Consensus 319 ~~g~~~~~~~~~~~ 332 (355)
T TIGR00896 319 QAAALSAMAQSIGY 332 (355)
T ss_pred HHHHHHHHHHHHHH
Confidence 56777888776544
No 82
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.10 E-value=5.2e-05 Score=79.45 Aligned_cols=97 Identities=10% Similarity=-0.043 Sum_probs=61.1
Q ss_pred hhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccccccc--ccccccccch---hhh---cccchhH
Q 015467 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSW--HRWFPFLTSR---ACC---AACGNLK 118 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~--~~~~~~~~~~---~~~---~~~~q~~ 118 (406)
.-++......+.-+|+.+..|+++|.++.++...+..+|.++|..++..... .+.+...... .++ .....-|
T Consensus 125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence 3455666677888999999999999999999999999999998887653110 0000000000 000 0011478
Q ss_pred HHHHHHHHHHHHHhhheeeEeeccCC
Q 015467 119 AAFLVAVVFLTLCALVTIYFADEVPL 144 (406)
Q Consensus 119 ~~f~i~ai~l~~~~~~Tl~~v~E~p~ 144 (406)
.+|.++++..++..+ ....+||.|-
T Consensus 205 ~~~~~~~ip~~i~~~-~~~~lpESpr 229 (502)
T TIGR00887 205 ILIGFGAVPALLALY-FRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHH-HHHhCCCCHH
Confidence 888877655444433 3467899864
No 83
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.04 E-value=1.5e-05 Score=83.21 Aligned_cols=268 Identities=12% Similarity=0.057 Sum_probs=133.5
Q ss_pred HHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHH---hhhhhhcccccccccccccccccchhhhcccchhHHHH
Q 015467 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMA---VGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (406)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~g---lG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f 121 (406)
++.-++.-....++.|+++|..+ ++|+.+++.++..-+ +|.++|..+++. +.+.+ .-+.+|
T Consensus 128 ~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~--l~~~~-------------~~~~~f 191 (468)
T TIGR00788 128 FLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP--LLDKT-------------LTRILF 191 (468)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH--HHHhc-------------CcchHH
Confidence 33445555666788999999999 777777777754433 788888777764 11111 135677
Q ss_pred HHHHHHHHHHhhheeeEeeccCC-CCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccc
Q 015467 122 LVAVVFLTLCALVTIYFADEVPL-TVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 200 (406)
Q Consensus 122 ~i~ai~l~~~~~~Tl~~v~E~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (406)
.+.+++.++. .+.....||++- ..++..+ + . +..
T Consensus 192 ~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~--~-----------------~-------------------------~~~ 226 (468)
T TIGR00788 192 LITAALLLLQ-LFVSNLSKERRAFVRPRIGT--Y-----------------L-------------------------EMN 226 (468)
T ss_pred HHHHHHHHHH-HHHHHhcccccccccccccc--c-----------------c-------------------------hhh
Confidence 7777666666 344566788631 0000000 0 0 000
Q ss_pred cccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhH
Q 015467 201 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 280 (406)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr 280 (406)
..+.. .+......+.++++++.+++ |.+++..+..|++|..-... ....-+..+...+.+|+ +.|+-
T Consensus 227 ~~~~~-~~~~~~~~~~~~~l~~~l~~--~~i~~~l~fifl~~~~~~~~-~~~~f~~~~~~lG~s~~---------~~G~~ 293 (468)
T TIGR00788 227 MALLT-LGVLANVKVQILGLRGAIQL--LEIAKPLIFIFLSYANLPGA-SGSVFCATTQCLPGGPS---------FSGMS 293 (468)
T ss_pred hhhhh-hhHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHHHHhhcCCC-CceeEEEEcccCCCCcc---------hhhhH
Confidence 00000 00000011235566666543 55666555555543321111 10000111112222333 22322
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHH-HhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII-SVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 281 ~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
.+ ..++...+...+..++.+|++.|++..++.++.+++.....+. +.+ +.+ -++ | +.+.++..
T Consensus 294 ~~-----~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~--~~~-~gi-----~---~~~~~~~~ 357 (468)
T TIGR00788 294 KV-----VGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRW--NLA-FGI-----S---DEVFVLGD 357 (468)
T ss_pred HH-----HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecc--ccc-cCC-----C---Ceeeeeeh
Confidence 22 2335566666777888899999999999998887665432211 111 000 000 1 22333444
Q ss_pred HHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 360 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
..+.++..+.....-..++++..+ ++..|++.|++++...+++
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p--~~~egt~~al~~s~~~lg~ 400 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCP--SGCESSVFALLASILHLGS 400 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCC--CCceehHHHHHHHHHHHHH
Confidence 455666666444433445555444 4566777777777665544
No 84
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.02 E-value=7.2e-05 Score=78.08 Aligned_cols=79 Identities=10% Similarity=0.114 Sum_probs=48.2
Q ss_pred hhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccc-cccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFP-FLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~-~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
.|..+++.|..|+++|.+++++...+..+|+.++..+.... ...+. ..... ....|..|.+.+++.++..++
T Consensus 142 ~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i--~~~~~~~~~~~-----~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 142 VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV--FPLIKDAGAPS-----FTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCcc-----hhhhHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999887788887775544220 00000 00000 013688888877666655555
Q ss_pred eeeEeec
Q 015467 135 TIYFADE 141 (406)
Q Consensus 135 Tl~~v~E 141 (406)
..+..++
T Consensus 215 ~~~~~~~ 221 (476)
T PLN00028 215 VLTLGQD 221 (476)
T ss_pred HHHHcCc
Confidence 4444333
No 85
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.93 E-value=0.00029 Score=70.76 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=37.1
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
++......+..+.+.|..++++|.++.++.+....+|..+|-.++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 106 IGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33334444556778899999999999999999999999999888764
No 86
>PRK10054 putative transporter; Provisional
Probab=97.87 E-value=6.5e-05 Score=76.33 Aligned_cols=140 Identities=11% Similarity=0.049 Sum_probs=94.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
+|||+.+-+.++.|+.+.++....-+.+.|+.+ .++-++. .. .+.+..+.+...+.+.+..++.+
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-~~g~s~~-------------~~-g~~~s~~~~~~~~~~~~~G~l~D 68 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSR-QYSLSVD-------------LI-GYAMTIALTIGVVFSLGFGILAD 68 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 488999999999999999999988888888865 2333321 22 34455666777888888999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccC
Q 015467 306 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 385 (406)
Q Consensus 306 ~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~ 385 (406)
|+|+|++..++.++.+++++...+.. +.+..++...+.|..++.....-.++.++..+
T Consensus 69 r~g~k~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 126 (395)
T PRK10054 69 KFDKKRYMLLAITAFASGFIAIPLVN--------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLS-- 126 (395)
T ss_pred hcCcchhHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 99999999988887776655444332 44555555556676666554444455555544
Q ss_pred CCCcceeehhhhhhhhc
Q 015467 386 GGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 386 ~~~~G~~mgllN~~i~l 402 (406)
+++.|..+|+.+....+
T Consensus 127 ~~~~~~~~g~~~~~~~l 143 (395)
T PRK10054 127 STSKTKIFSLNYTMLNI 143 (395)
T ss_pred HhHHHHHHHHHHHHHHH
Confidence 23455556666555443
No 87
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.80 E-value=0.00015 Score=74.40 Aligned_cols=143 Identities=10% Similarity=0.034 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
.++.+.+..++...+......|...|+.+ ++.++... ++ + +...-...+.+..+...+..++.+++.+|+|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~-~~---~--~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHE--FGRNPEFA-DS---F--VVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHH--hccccccc-ch---h--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34556666666666554454555555543 22233210 00 0 11222344556666667777888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCc
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
|++..++.++.++++....... ++..+.+..++...+.|+.++..+.....++++..+ ++..
T Consensus 281 r~~l~~~~~~~~v~~~l~~~~~----------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p--~~~~ 342 (418)
T TIGR00889 281 KKVMLLSLVAWALRFGFFAYGD----------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP--VHIR 342 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--HHHH
Confidence 9999999887776543222211 000023444556777888888777666677777665 3567
Q ss_pred ceeehhhhh
Q 015467 390 GLAIGVLNL 398 (406)
Q Consensus 390 G~~mgllN~ 398 (406)
|..+|+.|.
T Consensus 343 g~~~g~~~~ 351 (418)
T TIGR00889 343 ASAQGLFTL 351 (418)
T ss_pred HHHHHHHHH
Confidence 888888873
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.73 E-value=0.001 Score=68.13 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=39.1
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
++.-..+.+.-+++.+..|++++.+..++.....++|+.+|..++..
T Consensus 106 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 106 AGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred hhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777889999999999999999999999999999888653
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.71 E-value=0.0003 Score=71.03 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=39.4
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
.-+++||+++|+.+++.|.+|.+..+...++|-++|=.+|+.
T Consensus 137 nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 137 NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhH
Confidence 357899999999999999999999999999999999999986
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00059 Score=71.47 Aligned_cols=270 Identities=17% Similarity=0.199 Sum_probs=139.3
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhH--HHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK--AAFLVAV 125 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~--~~f~i~a 125 (406)
=.+.-..++-.=-|+....|++.|+...........+|-++|..+|. ++.+| ++.. .++.+..
T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l----~~ilG-----------t~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGL----PSLLG-----------TEDLWPYLLAFPL 191 (485)
T ss_pred HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHcc----HHhcC-----------CCcchHHHHHHHH
Confidence 34444555556678999999999999988888888888888877763 22222 1222 3333333
Q ss_pred HHHHHHhhheeeEeeccCCCCCC-CCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCc-ccCccccchhhhcccccc
Q 015467 126 VFLTLCALVTIYFADEVPLTVNQ-PNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKV-ESGHESDANLKHISKKAE 203 (406)
Q Consensus 126 i~l~~~~~~Tl~~v~E~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 203 (406)
+..+..+..+...||.|---.. .++ ..++.+..|. -.|.++ ++.. +...++ .+
T Consensus 192 -i~~~~~l~~l~~~PESPk~Ll~~k~~-----------~~~A~~sl~~-------y~G~~~~~~~~--e~~~~e----~~ 246 (485)
T KOG0569|consen 192 -IPALLQLALLPFLPESPKYLLIKKGD-----------EEEARKALKF-------YRGKEDVEAEI--EEMLRE----IE 246 (485)
T ss_pred -HHHHHHHHHHhcCCCCcchHHHHcCC-----------HHHHHHHHHH-------HhCCCcchhHH--HHHHHH----HH
Confidence 3333344456688997521100 000 0000000000 000000 0000 000000 00
Q ss_pred ccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHH-HhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHH
Q 015467 204 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWL-SWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 282 (406)
Q Consensus 204 ~~~~~~~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~-g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~G 282 (406)
++ +. .+....+++++++. +++-+++...+.+++.--+ |..+..+|.|+...+. |=+ +++ .
T Consensus 247 ~~-~~-~~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a---G~~---------~~~----a 307 (485)
T KOG0569|consen 247 EE-EL-EKKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA---GFT---------PEE----A 307 (485)
T ss_pred Hh-cc-ccccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc---CCC---------HHH----H
Confidence 00 10 11123567888875 3344557777777776544 5555666666544331 100 111 1
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.++-..-+++..+++++-+.+++|+|||.+.+++..+.+++...+.+.... .+.. . ..-.|..++.+.+
T Consensus 308 ~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l-~~~~-~---------~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 308 QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFL-SNSF-G---------SWLSYLCIAAIFL 376 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH-HHHh-h---------hHHHHHHHHHHHH
Confidence 233334455677777778899999999999999887766555433222211 0000 0 0011233455555
Q ss_pred hhhHHHHH-hhchhhhhhcccccCCC
Q 015467 363 LGFPLAIT-YSVPFAITAELTADSGG 387 (406)
Q Consensus 363 ~Gi~wA~~-~siPfaLl~~~~~~~~~ 387 (406)
..+.+++- --+||-+.+|..+.+.|
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R 402 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSAR 402 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccch
Confidence 56666665 67999999998765433
No 91
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.61 E-value=0.0011 Score=71.92 Aligned_cols=59 Identities=14% Similarity=0.209 Sum_probs=51.0
Q ss_pred hhhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 37 I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
..+.+++=.+.=++.-..+....+|+.|..|++++.++.++......+|..+|+++|+.
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34445566677778888888899999999999999999999999999999999999875
No 92
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.00036 Score=73.00 Aligned_cols=254 Identities=16% Similarity=0.194 Sum_probs=143.6
Q ss_pred hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccc-cccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 015467 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRW-FPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (406)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~-~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~T 135 (406)
..-.+..--.|+++|.+..++.+...-+|++++.-+++. +-+. +++ +.+|.+.+++-++..++=
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~--lc~s~~GW-------------~sifY~~g~~g~i~~~~w 212 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGL--LCESSLGW-------------PSIFYVFGIVGLIWFILW 212 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HhccCCCC-------------chHHHHHHHHHHHHHHHH
Confidence 344455667899999999999999999999998866553 1111 221 345555444444443433
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchh
Q 015467 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (406)
Q Consensus 136 l~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
.+...|.|-+.+ . .++.+.+-+.+.|.+ + +. ++++.-
T Consensus 213 ~~~~~d~P~~h~--~--------is~~El~~I~~~k~~-----------------------------~---~~-~~~~~v 249 (466)
T KOG2532|consen 213 FLFYSDSPSKHP--N--------ISEKELKYIEKGKSE-----------------------------A---HV-KKKPPV 249 (466)
T ss_pred HHHhcCCcccCC--C--------CCHHHHHHHHhcccc-----------------------------c---cc-CCCCCC
Confidence 445566543211 1 111100000000000 0 00 011234
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHH
Q 015467 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 295 (406)
Q Consensus 216 ~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v 295 (406)
.+++++++ ++++-+++.+|..-.+++.++.|..+|+-+ |.|=|-+. .| -..++=.+...++..+
T Consensus 250 P~~~i~ts-----~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~~---------~G-~~salP~l~~~~~k~~ 313 (466)
T KOG2532|consen 250 PYKAILTS-----PPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFDVRE---------TG-FLSALPFLAMAIVKFV 313 (466)
T ss_pred CHHHHHcC-----HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCChhh---------hh-HHHHHHHHHHHHHHHH
Confidence 68889988 899999999999999999999999999987 77766542 11 2223444444555666
Q ss_pred HHHhHHHhhhh-c----CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 296 SSFLIEPMCRW-I----GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 296 ~s~~l~~l~~~-i----g~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
++.+..++.+| + -+|-.-.+++..-+++++...++. ++ +.+.+++++.+ .++....
T Consensus 314 ~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~----~~--------------~~~~a~~~l~~-~~~~~g~ 374 (466)
T KOG2532|consen 314 AGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS----DE--------------HRLLAVILLTI-AIGLSGF 374 (466)
T ss_pred HHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC----CC--------------cchHHHHHHHH-HHHHccc
Confidence 66666766664 2 234556667777766666544443 00 22222222222 2222222
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
+..=|..-...+ .++-.|.-||+-|...+++++
T Consensus 375 ~~~Gf~~~~~~~--apq~a~~l~g~~~~~~~~~~~ 407 (466)
T KOG2532|consen 375 NISGFYKNHQDI--APQHAGFVMGIINFVGALAGF 407 (466)
T ss_pred chhhhHhhhhhc--cchHHHHHHHHHHHHHHHHHH
Confidence 222222222211 367789999999999888765
No 93
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.58 E-value=0.00026 Score=72.09 Aligned_cols=142 Identities=16% Similarity=0.073 Sum_probs=97.4
Q ss_pred hccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHh
Q 015467 224 LRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPM 303 (406)
Q Consensus 224 i~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l 303 (406)
.+++|| +.+...+++.+.+++.++-+...|+.+ ..+.++. ..| +.+..+.+...+.+.+..++
T Consensus 7 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-------------~~g-l~~~~~~l~~~~~~~~~G~l 69 (400)
T PRK11646 7 ARNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVD-QLGWAAV-------------MVG-IALGLRQFIQQGLGIFGGAI 69 (400)
T ss_pred cccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCcHH-------------HHH-HHHHHHHHHHHHHHhhhhHH
Confidence 356888 778899999999999998888877654 2332211 222 44555666677778888999
Q ss_pred hhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccc
Q 015467 304 CRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA 383 (406)
Q Consensus 304 ~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~ 383 (406)
.+|+|+|++..++.++.++++....+.. +.+..++...+.|+..+.....=.+++.+..+
T Consensus 70 ~dr~g~k~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~ 129 (400)
T PRK11646 70 ADRFGAKPMIVTGMLMRAAGFATMAIAH--------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIR 129 (400)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999998887766544322 55666777777888765443333566666655
Q ss_pred cCCCCcceeehhhhhhhhccc
Q 015467 384 DSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 384 ~~~~~~G~~mgllN~~i~lpQ 404 (406)
+ ++.|..+|+.+....+++
T Consensus 130 ~--~~~~~a~~~~~~~~~~g~ 148 (400)
T PRK11646 130 P--HQRGRFFSLLMMQDSAGA 148 (400)
T ss_pred H--HHHHHHHHHHHHHHHHHH
Confidence 3 456667777766655443
No 94
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.36 E-value=0.0006 Score=68.50 Aligned_cols=138 Identities=12% Similarity=0.023 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 015467 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (406)
Q Consensus 227 mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ 306 (406)
.+|++..++..+++.+++......+...|..+ +|.++. .. .+.+..+.+...+...+..++.+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~s~~-------------~~-G~~~s~~~l~~~~~~~~~g~l~dr 67 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--EHLPTW-------------QV-GVVSSSYFTGNLVGTLLAGYVIKR 67 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--cCCCHH-------------HH-HHHHHHHHHHHHHHHHhHHHHHHH
Confidence 45789999999999999988888888877765 333211 12 345666777778888889999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 307 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 307 ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
+|+|++..++.++.++++....+.. +.+..++.-.+.|+..+.....-.+.+.+..++
T Consensus 68 ~g~k~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-- 125 (381)
T PRK03633 68 IGFNRSYYLASLIFAAGCAGLGLMV--------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS-- 125 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--
Confidence 9999999999988887665444332 556667777888888877654434444444332
Q ss_pred CCcceeehhhhhhhhc
Q 015467 387 GGQGLAIGVLNLAIVI 402 (406)
Q Consensus 387 ~~~G~~mgllN~~i~l 402 (406)
++.|..+|+.+....+
T Consensus 126 ~~~~~~~~~~~~~~~~ 141 (381)
T PRK03633 126 RNRGRLLAAYMMVYYL 141 (381)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445556665554433
No 95
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.34 E-value=0.00093 Score=67.21 Aligned_cols=139 Identities=9% Similarity=0.004 Sum_probs=97.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 015467 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (406)
Q Consensus 227 mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ 306 (406)
|++.++.++..+|..+++-+.+.-..+.+..+ |+-++. ...+....+.+...+...+..++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~s~~--------------~~g~~~s~~~~~~~~~~~~~g~l~dr 64 (382)
T PRK10091 1 MKKVILSLALGTFGLGMAEFGIMGVLTELAHD--VGISIP--------------AAGHMISYYALGVVVGAPIIALFSSR 64 (382)
T ss_pred CcchHHHHHHHHHHHHhhHHHHHhChHHHHHH--cCCCHH--------------HHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 78889999999998888877666655554433 332211 12345666777788888899999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 307 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 307 ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
+|+|++..++.++.+++.+...+.. +.+..++.-.+.|+..+.......+++.+..++
T Consensus 65 ~g~r~~~~~~~~~~~~~~~l~~~~~--------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-- 122 (382)
T PRK10091 65 YSLKHILLFLVALCVIGNAMFTLSS--------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP-- 122 (382)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh--
Confidence 9999999999988887665444332 667777888899999888776667777776553
Q ss_pred CCcceeehhhhhhhhcc
Q 015467 387 GGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 387 ~~~G~~mgllN~~i~lp 403 (406)
++.|..+|+......++
T Consensus 123 ~~~~~~~~~~~~~~~~g 139 (382)
T PRK10091 123 GKVTAAVAGMVSGMTVA 139 (382)
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 34555666666554443
No 96
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.33 E-value=0.001 Score=64.78 Aligned_cols=134 Identities=14% Similarity=0.059 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHH
Q 015467 234 VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVW 313 (406)
Q Consensus 234 l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~ 313 (406)
|++..|+..+++..+....+.++.+ -++-++. .. .+....+.+...+.+++..++.+|+|+|++.
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~-------------~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l 65 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAE-ELGLSPS-------------QI-GLLFSAFFLGSALFSPFAGYLSDRFGRRRVL 65 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHC-CSTTTSH-------------CH-HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE
Confidence 4667777777777766666644444 2333332 12 2345567777888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceee
Q 015467 314 AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAI 393 (406)
Q Consensus 314 ~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~m 393 (406)
.++.++.+++.....+.. +.+..++...+.|+..+.....-.+++.++.++ ++.+..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--~~~~~~~ 123 (352)
T PF07690_consen 66 IIGLLLFALGSLLLAFAS--------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPP--EERGRAF 123 (352)
T ss_dssp HHHHHHHHHHHHHHHHHC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT--CCHHHHH
T ss_pred eehhhhhhhHHHHhhhhh--------------------hHHHHhhhccccccccccccccccccccccchh--hhhhhcc
Confidence 999998887733222221 445778888899999999999999999998774 5677778
Q ss_pred hhhhhhhhccc
Q 015467 394 GVLNLAIVIPQ 404 (406)
Q Consensus 394 gllN~~i~lpQ 404 (406)
|+.+....++.
T Consensus 124 ~~~~~~~~~g~ 134 (352)
T PF07690_consen 124 GILSAGFSLGS 134 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred ccccchhhhhh
Confidence 88887766543
No 97
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.33 E-value=0.0012 Score=65.54 Aligned_cols=136 Identities=13% Similarity=0.061 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k 310 (406)
+..+++.++...+.+..+....+.+..+ |+-++. +. .+....+.+...+.+++...+.+|+|+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~s~~-------------~~-g~~~~~~~~~~~~~~~~~G~l~Dr~g~r 77 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE--FGLTTV-------------DA-ASLISAALISRWFGALMFGLWGDRYGRR 77 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChh-------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 4455555566666666655555544332 333222 22 2334456667777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcc
Q 015467 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 390 (406)
Q Consensus 311 ~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G 390 (406)
+++.++.++.+++.+...+.. +.+..++.-.+.|+..+.......+++.+..++ ++.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--~~~~ 135 (405)
T TIGR00891 78 LPMVTSIVLFSAGTLACGFAP--------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK--HLRN 135 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh--hhhh
Confidence 999999888876655444332 556677778889999998888888888887764 4566
Q ss_pred eeehhhhhhhhccc
Q 015467 391 LAIGVLNLAIVIPQ 404 (406)
Q Consensus 391 ~~mgllN~~i~lpQ 404 (406)
..+|+++....+++
T Consensus 136 ~~~~~~~~~~~~g~ 149 (405)
T TIGR00891 136 KASGLLISGYAVGA 149 (405)
T ss_pred HHHHHHHHHHHHHH
Confidence 77787777655543
No 98
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.32 E-value=0.0011 Score=69.49 Aligned_cols=144 Identities=7% Similarity=-0.005 Sum_probs=95.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccee-eecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~-Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~ 304 (406)
+.|+.++.++.++++.=++++....+.+.|+-+. -++-++ - .. .+-+..+++...+.+++...+.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~---------~----~a-g~~~~~~~~~~~~~~~~~G~la 72 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQ---------E----QA-FIIFGAYSALVYLLTSVGWWFG 72 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCH---------H----HH-HHHHHHHHHHHHHHHhhHHHHH
Confidence 4799999999999887777776666666665431 011111 1 12 2445666777888888889999
Q ss_pred hh-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccc
Q 015467 305 RW-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA 383 (406)
Q Consensus 305 ~~-ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~ 383 (406)
+| +|+|++..++.++.+++++...+.. +.+..++...+.|+..+.......+++++..+
T Consensus 73 Dr~~G~~~~l~~~~~~~~~g~~~~~~~~--------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~ 132 (475)
T TIGR00924 73 DRVWGTKKTMVLGGIVLMLGHFMLAMSI--------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYE 132 (475)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHhcc--------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcC
Confidence 98 8999999999888876655433321 33445555667788888777777888887765
Q ss_pred cCC-CCcceeehhhhhhhhcc
Q 015467 384 DSG-GGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 384 ~~~-~~~G~~mgllN~~i~lp 403 (406)
+++ ++.+...++++..+.++
T Consensus 133 ~~~~~~r~~~~~~~~~~~niG 153 (475)
T TIGR00924 133 RGDMPRRDGGFTLFYMSINIG 153 (475)
T ss_pred CCCcccccceehhHHHHHHHH
Confidence 322 23455567666665544
No 99
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.28 E-value=0.0036 Score=65.49 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhH----HHhhhh-cCchHH--HHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHH
Q 015467 286 LLLNSVVLGVSSFLI----EPMCRW-IGSRLV--WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 358 (406)
Q Consensus 286 L~~~siv~~v~s~~l----~~l~~~-ig~k~~--~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (406)
..++++...+...++ +++.|| .+.+.. ..+|.++.+++++.+.+..... ++ +...+.+..+.
T Consensus 318 ~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~-~~----------~~~~s~~~~i~ 386 (475)
T TIGR00924 318 QSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA-DA----------GGLTSPWFMVL 386 (475)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc-CC----------CCccCHHHHHH
Confidence 344555555554343 344444 233333 3778888888877665542110 00 00126777888
Q ss_pred HHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 359 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 359 l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
...+.|+.-......-.+++++..+ ++..|.++|+++++..++
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP--~~~~g~~~g~~~l~~~~g 429 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAP--QRLMGQMLGMWFLAQAMG 429 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999876 357899999998877654
No 100
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.28 E-value=0.0041 Score=65.54 Aligned_cols=273 Identities=13% Similarity=0.154 Sum_probs=137.3
Q ss_pred hhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHH
Q 015467 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (406)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai 126 (406)
.-++.-..+...=-|+.|+.|++.|..-.+..+.+..+|-.+||+++... .+. + .+-|..+.++.+
T Consensus 152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~--~~~-~-----------~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT--SKV-Y-----------AGWRIPLGLALI 217 (513)
T ss_pred hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh--ccC-C-----------ccHHHHHHHHHH
Confidence 34555666677778999999999999999999999999999999998752 111 1 124566666555
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhcc-cccccc
Q 015467 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHIS-KKAEDT 205 (406)
Q Consensus 127 ~l~~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 205 (406)
--++-.+. +++.||.|---.+..+..+ ......+.+.. + +.+. ..+..... ...++.
T Consensus 218 ~~~~~~~~-~~~~pesp~~L~~~g~~~~--------a~~~l~~l~g~----------~-~~~~--~~~~~~~~~~~~~~~ 275 (513)
T KOG0254|consen 218 PAVILALG-MLFLPESPRWLIEKGRLEE--------AKRSLKRLRGL----------S-PEDV--EVELELLKIKLLVEA 275 (513)
T ss_pred HHHHHHHH-HHhCCCChHHHHHcCChHH--------HHHHHHHHhCC----------C-Ccch--HHHHHHHHHHHHHhh
Confidence 55555555 6788887642211110000 00000000000 0 0000 00000000 000000
Q ss_pred CCCCCCCchhhHHHHHHHhccCCHHHHH-HHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHH
Q 015467 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHV-VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (406)
Q Consensus 206 ~~~~~~~~~~~~~~i~~si~~mP~~~~~-l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~ 284 (406)
.. ......++++++ +++.+.... +++.-|..+.|+....+|.++.... .-..++. .+
T Consensus 276 ~~---~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~----------------~~ 333 (513)
T KOG0254|consen 276 EV---AEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT----------------FL 333 (513)
T ss_pred hc---ccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch----------------HH
Confidence 00 000012344444 445555543 4444555566666666666665433 2111110 22
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
+-.+.+++..+..++.-.+++|+|||.+.+.|.+.+++|++......... .+..+.... .....+..++..+.
T Consensus 334 ~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~v~ 406 (513)
T KOG0254|consen 334 ASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFA--LYYPNSSKG-----AGWLAIVFLCLFIF 406 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHh--ccCCCcccc-----hhHHHHHHHHHHHH
Confidence 23333344444444446788889999999999999998888655543221 110000000 01223333334444
Q ss_pred hHHHHHhhchhhhhhccccc
Q 015467 365 FPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~ 384 (406)
......-.+|+.+.+|..+.
T Consensus 407 ~f~~g~g~v~w~~~sEifp~ 426 (513)
T KOG0254|consen 407 SFAIGWGPVPWVIVSEIFPL 426 (513)
T ss_pred HHhcccccchhhhhhccCcH
Confidence 44445566777777776553
No 101
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.27 E-value=1.9e-06 Score=88.23 Aligned_cols=84 Identities=14% Similarity=0.184 Sum_probs=58.7
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
+++...+...-.|+.+.+|++.|....++.+....+|.+++++++.. +....+ ..+-|..+.++++..
T Consensus 114 ~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~----------~~~Wr~~~~~~~~~~ 181 (451)
T PF00083_consen 114 FGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYI--VSYYSD----------NWGWRILLIFGAIPS 181 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc--cccccc----------ccccccccccccccc
Confidence 45566777888999999999999999889988889998888888754 211111 123566666666544
Q ss_pred HHHhhheeeEeeccCCC
Q 015467 129 TLCALVTIYFADEVPLT 145 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~~ 145 (406)
++ +++.....||.|.-
T Consensus 182 l~-~~~~~~~~pESP~w 197 (451)
T PF00083_consen 182 LL-VLLLRFFLPESPRW 197 (451)
T ss_pred cc-ccccccccccccce
Confidence 44 34455788998753
No 102
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.25 E-value=0.0017 Score=68.31 Aligned_cols=142 Identities=5% Similarity=0.002 Sum_probs=91.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
+.||.++.++.++++.=++++.+..+...|+-++ ++-+. ....|....|.....+...+-.++.+
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-lg~~~--------------~~a~~i~~~~~~~~~~~~~~~G~laD 75 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-LGFSQ--------------EQAFITFGAFAALVYGLISIGGYVGD 75 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH--------------HHHHHHHHHHHHHHHHHHhhHHHhhh
Confidence 4799999999999866666666666666666542 22111 11234444455555555667789999
Q ss_pred h-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc
Q 015467 306 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 306 ~-ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~ 384 (406)
| +|+|+++.++.++++++.+.+.+.. + .....++...+.|+..+.....+.+++++..++
T Consensus 76 r~~G~r~~~~~g~~~~~~g~~~~~~~~----~---------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~ 136 (489)
T PRK10207 76 HLLGTKRTIVLGAIVLAIGYFMTGMSL----L---------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPP 136 (489)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc----c---------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCC
Confidence 8 9999999999999987665444322 0 112233456677898888888889999987654
Q ss_pred CCCCcceeehhhhhhhh
Q 015467 385 SGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 385 ~~~~~G~~mgllN~~i~ 401 (406)
++++.+..++++.+.+.
T Consensus 137 ~~~~~~~~~~~~~~~~n 153 (489)
T PRK10207 137 KDPRLDGAFTLFYMSIN 153 (489)
T ss_pred CchhhhcchhHHHHHHH
Confidence 43333334555554443
No 103
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.22 E-value=0.0084 Score=62.75 Aligned_cols=77 Identities=21% Similarity=0.320 Sum_probs=62.7
Q ss_pred cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
++..-.=||++|++..+.|....++.+...+.|..+|-++|+. +.+.. ..-.+|.++++..++..
T Consensus 128 ~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~--~~~~~-------------~~a~~f~ia~~~~~~~~ 192 (463)
T KOG2816|consen 128 AIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY--LVKFL-------------GIALVFLIAAASGILSL 192 (463)
T ss_pred hhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHhc-------------CchHHHHHHHHHHHHHH
Confidence 3445566889999999999999999999889999999888875 33332 24578899999999999
Q ss_pred hheeeEeeccCC
Q 015467 133 LVTIYFADEVPL 144 (406)
Q Consensus 133 ~~Tl~~v~E~p~ 144 (406)
+...+++||.-.
T Consensus 193 ~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 193 LYMLLFLPESLQ 204 (463)
T ss_pred HHHhhccccccC
Confidence 999999999643
No 104
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.19 E-value=0.0013 Score=63.60 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 015467 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~ 311 (406)
..++..+++..+++..+..+.+.+..+ ++.++ ....+....+.+...+.+.+..++.+|+|+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~ 65 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAED--LGLSA--------------SQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR 65 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHH--cCCCH--------------HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch
Confidence 345667777777777776666666544 22221 11234456677778888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcce
Q 015467 312 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGL 391 (406)
Q Consensus 312 ~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~ 391 (406)
+..++.++.+++.....+.. +.+..++...+.|+..+.....-.+++.+..++ ++.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~ 123 (352)
T cd06174 66 VLLLGLLLFALGSLLLAFAS--------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP--KERGR 123 (352)
T ss_pred hhHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCc--cchhh
Confidence 99999888887766544432 556777788888999988888888888888764 45667
Q ss_pred eehhhhhhhhccc
Q 015467 392 AIGVLNLAIVIPQ 404 (406)
Q Consensus 392 ~mgllN~~i~lpQ 404 (406)
.+|+.+....+++
T Consensus 124 ~~~~~~~~~~~g~ 136 (352)
T cd06174 124 ALGLFSAGFGLGA 136 (352)
T ss_pred hhhHHHHHHHHHH
Confidence 7888877766554
No 105
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.17 E-value=0.00078 Score=55.98 Aligned_cols=96 Identities=20% Similarity=0.198 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhH
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 366 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~ 366 (406)
..+++...+.+.+.+++.+|+|+|++...+.++.++++....+.. +.+...+...+.|+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~ 64 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--------------------NITVLIIARFLQGFG 64 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHH
Confidence 345566777888889999999999999988887776655433322 556677778889999
Q ss_pred HHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 367 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 367 wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.+.......+++.+..++ ++.|..+|+.+....+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 100 (141)
T TIGR00880 65 AAFALVAGAALIADIYPP--EERGVALGLMSAGIALGP 100 (141)
T ss_pred HHHHHHhHHHHHHHHCCh--hhhhHHHHHHHHhHHHHH
Confidence 998888888888887763 456667777777665544
No 106
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.14 E-value=0.0014 Score=66.56 Aligned_cols=137 Identities=12% Similarity=0.043 Sum_probs=93.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 015467 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (406)
Q Consensus 227 mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ 306 (406)
|+|..+.+++.+|++-++-..+......++.+ ++.++ ..-.|....|.+...+.+.+..++.+|
T Consensus 1 ~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~--------------~~~~~~~~~~~l~~~l~~~~~G~laDr 64 (393)
T PRK11195 1 MSKGFYAIMAAQFFSALADNALLFAAIALLKE--LHYPD--------------WSQPLLQMFFVLAYIVLAPFVGAFADS 64 (393)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcH--------------HHHHHHHHHHHHHHHHHHhhhhHhhhc
Confidence 67788999999999887644333333333222 22211 112455667777778888888999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 307 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 307 ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
+|+|++..++.++++++.+...+.. +. ++.-.+.|+.-+.......+++.++.++
T Consensus 65 ~grr~vl~~~~~~~~~~~~~~~~~~--------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~-- 119 (393)
T PRK11195 65 FPKGRVMFIANGIKLLGCLLMLFGI--------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPG-- 119 (393)
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHH--------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCH--
Confidence 9999999999999876554333221 22 3444578999999999999999999874
Q ss_pred CCcceeehhhhhhhhccc
Q 015467 387 GGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 387 ~~~G~~mgllN~~i~lpQ 404 (406)
++.+..+|+.+....+++
T Consensus 120 ~~~~~a~~~~~~~~~~~~ 137 (393)
T PRK11195 120 EKLVKANGWMEGSTIAAI 137 (393)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456667777766655443
No 107
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.12 E-value=0.0028 Score=66.73 Aligned_cols=143 Identities=8% Similarity=-0.000 Sum_probs=91.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
+.|+.++.++.+.++..++++.+..+.+.|+-+ .++-++. + ..+....+.........+..++.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-~lg~s~~---------~-----a~~~~~~~~~~~~~~~~~~G~LaD 82 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVK-QLGMSEA---------D-----SITLFSSFSALVYGLVAIGGWLGD 82 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH---------H-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999999988888888765 2332221 0 112222233333444456789999
Q ss_pred h-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc
Q 015467 306 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 306 ~-ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~ 384 (406)
| +|+|++..++.++++++.....+.. + +.....+...+.|+..+.....+.+++++..++
T Consensus 83 r~~G~r~~~~~g~~~~~ig~~l~~~~~----~---------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~ 143 (500)
T PRK09584 83 KVLGTKRVIMLGAIVLAIGYALVAWSG----H---------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK 143 (500)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc----c---------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC
Confidence 9 5999999999988887655433321 0 223333445667888887777888888887654
Q ss_pred CCCCcceeehhhhhhhhc
Q 015467 385 SGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 385 ~~~~~G~~mgllN~~i~l 402 (406)
++++.+..+++++.++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~i 161 (500)
T PRK09584 144 DDPRLDGAFTMYYMSINI 161 (500)
T ss_pred CchhhhhcchHHHHHHHH
Confidence 333333345555555443
No 108
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.07 E-value=0.0061 Score=64.26 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=62.7
Q ss_pred HhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhh
Q 015467 298 FLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAI 377 (406)
Q Consensus 298 ~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaL 377 (406)
.+.+++.+|++.++...+|.++.++++....+... |.+.- +.-+.+..+....+.|+.-....-+=+++
T Consensus 338 ~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~-----~~~~~------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~ 406 (500)
T PRK09584 338 AIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAK-----FANDA------GIVSVNWLIASYGLQSIGELMISGLGLAM 406 (500)
T ss_pred HHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHH-----hcCCC------CccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34477777778888899999999988876554431 10000 01145567777888888888888888888
Q ss_pred hhcccccCCCCcceeehhhhhhhhc
Q 015467 378 TAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 378 l~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
+.+..+ ++..|..||++.+...+
T Consensus 407 ~~~~aP--~~~rg~~~g~~~l~~a~ 429 (500)
T PRK09584 407 VAQLVP--QRLMGFIMGSWFLTTAG 429 (500)
T ss_pred HHHhCc--HHHHHHHHHHHHHHHHH
Confidence 888766 45678888888654443
No 109
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.07 E-value=0.0018 Score=63.28 Aligned_cols=140 Identities=9% Similarity=-0.007 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 015467 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~ 311 (406)
|.++..++++.++..........|+.+ ++.++. .. .+....+.+...+.+.+..++.+|+|+|+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~-------------~~-g~~~~~~~~~~~i~~~~~G~l~dr~g~r~ 65 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLA--GTGSAS-------------VL-SLAALAGMLPYVVLSPIAGALADRYDRKK 65 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHH--hhccHH-------------HH-HHHHHHHHHHHHHHHHhhhHHHHhhchhH
Confidence 457778888888877776666655544 222211 22 34456677778888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcce
Q 015467 312 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGL 391 (406)
Q Consensus 312 ~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~ 391 (406)
++.++.++.+++.+...+.... + ..+.+..++...+.|+..+.....-.+++.+..++ ++.|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~ 128 (365)
T TIGR00900 66 VMIGADLIRAVLVAVLPFVALL--G-------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE--EQLTQ 128 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc--C-------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--HHHHH
Confidence 9999988877665544443311 0 01456677778888999988888888898888764 35566
Q ss_pred eehhhhhhhhccc
Q 015467 392 AIGVLNLAIVIPQ 404 (406)
Q Consensus 392 ~mgllN~~i~lpQ 404 (406)
.+|+.+.+..+++
T Consensus 129 ~~~~~~~~~~~g~ 141 (365)
T TIGR00900 129 ANSLSQAVRSLFY 141 (365)
T ss_pred HHhHHHHHHHHHH
Confidence 6777777665543
No 110
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.04 E-value=0.0028 Score=65.67 Aligned_cols=104 Identities=14% Similarity=0.087 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+..++...+.+|+|+|++..++.++.+++.+.+.+.. ... ..+.+..+++-.+.
T Consensus 68 ~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~l~~~r~l~ 132 (467)
T PRK09556 68 MIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASL-GSG--------------SVSLGLMIALWALS 132 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHH-hcc--------------cchHHHHHHHHHHH
Confidence 334456667777788889999999999999988888776655444321 000 01566777777888
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+.......+++++..+ +++.|..+|+++....++.
T Consensus 133 G~~~~~~~~~~~~~i~~~~~--~~~rg~a~gi~~~~~~lG~ 171 (467)
T PRK09556 133 GFFQSTGGPCSYSTITRWTP--RRKRGRFLGFWNISHNLGG 171 (467)
T ss_pred HHHHhccchHHHHHHHHHcC--ccceeeeEEeeecccchhh
Confidence 99888888888888888876 3567788888877665543
No 111
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.04 E-value=0.0019 Score=66.06 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHH
Q 015467 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 361 (406)
Q Consensus 282 Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (406)
..+.+.+|.+..++..++..++.+|+|+|++...+.++++++.....+.. +.+..++.-.
T Consensus 53 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--------------------~~~~l~~~r~ 112 (413)
T PRK15403 53 APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--------------------SMTQFLIARF 112 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--------------------CHHHHHHHHH
Confidence 34556666777777788889999999999999999888887665444332 5566677777
Q ss_pred HhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 362 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 362 ~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
+.|+.-+....+.++++.+..++ ++.+..+|+++....+
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 151 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQ--TKGIKLMAIITSIVLV 151 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHH
Confidence 78887776666677777776543 3344456666555433
No 112
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.99 E-value=0.017 Score=60.83 Aligned_cols=105 Identities=16% Similarity=0.173 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchH-------HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRL-------VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~-------~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (406)
++.+...+.+.++.++-+|+++|+ -..+|.++.+++++...+......+. ++ ..+.+......
T Consensus 317 ~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~--~~--------~~s~~~~i~~~ 386 (489)
T PRK10207 317 LNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADA--QG--------LTSPWFIVLVY 386 (489)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CC--------ccCHHHHHHHH
Confidence 344555566666778888887775 36777777776665433221100000 00 01456666778
Q ss_pred HHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 361 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 361 ~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.+.|+........-.+++.+..+ ++..|..||++++...+++
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP--~~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVP--QHLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHH
Confidence 88899888888888888888765 4678999999998776554
No 113
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.99 E-value=0.011 Score=61.88 Aligned_cols=183 Identities=12% Similarity=0.023 Sum_probs=102.1
Q ss_pred chhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccccccc-ccccccccccchh-hhc--ccchhHHHHHHHHHHHH
Q 015467 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRA-CCA--ACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~-d~~~~~~~~~~~~-~~~--~~~q~~~~f~i~ai~l~ 129 (406)
...+.-..+....|+++|.+++++..-..++|..++..+.... ... .+...+... ... -..-.|.++.+-+++++
T Consensus 144 ~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~-l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~i 222 (462)
T PRK15034 144 NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP-VFAFLGVNGVPQADGSVMSLANAAWIWVPLLA 222 (462)
T ss_pred hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHhccccccccccchHHHHHHHHHHHHHHH
Confidence 3346777788999999999999999877888888776654210 000 000000000 000 00125566656555555
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCC
Q 015467 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (406)
+..++..+..++.|- +
T Consensus 223 v~~i~~~~~~~~~~~---~------------------------------------------------------------- 238 (462)
T PRK15034 223 IATIAAWSGMNDIAS---S------------------------------------------------------------- 238 (462)
T ss_pred HHHHHHHHhCCCccc---c-------------------------------------------------------------
Confidence 555444444343210 0
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHH
Q 015467 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (406)
Q Consensus 210 ~~~~~~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~ 289 (406)
...+++..+ +.++|+ .|.+|+.-+.+.-++..+..|+..|.-+ .|. . . ...+...+ .
T Consensus 239 ----~~~~~~~~~-vlk~~~-~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~---~--------~-~~l~~~~l----~ 295 (462)
T PRK15034 239 ----RASIADQLP-VLQRLH-LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFP---D--------V-NILRLAFF----G 295 (462)
T ss_pred ----ccCHHHHHH-HhCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcC---h--------H-HHHHHHHH----H
Confidence 012344443 444564 6899999988888888887776665422 221 0 0 01122222 3
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHH
Q 015467 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM 324 (406)
Q Consensus 290 siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~ 324 (406)
.++..+...+-..+.+|+|+|++..++.++..++.
T Consensus 296 ~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 296 PFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred HHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 34455555566788999999999888776665544
No 114
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.97 E-value=0.0031 Score=65.15 Aligned_cols=73 Identities=26% Similarity=0.273 Sum_probs=59.1
Q ss_pred hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 015467 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (406)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl 136 (406)
-+-.+|.|..|++||+++++|..+-.-+|..+||.+|.. -.+..+ .=|+.|...+++-+++.+++.
T Consensus 141 ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~--va~~~~------------~Wr~af~~~avl~vi~~~L~~ 206 (493)
T KOG1330|consen 141 IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV--VASLTF------------WWRWAFRGSAVLGVIVGLLVF 206 (493)
T ss_pred cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee--eccCcc------------ceEEEEEeehHHHHHHHHHHH
Confidence 345789999999999999999999999999999999975 222111 136677788888888999999
Q ss_pred eEeeccC
Q 015467 137 YFADEVP 143 (406)
Q Consensus 137 ~~v~E~p 143 (406)
++++|+.
T Consensus 207 ~f~~eP~ 213 (493)
T KOG1330|consen 207 LFVREPE 213 (493)
T ss_pred hhccCcc
Confidence 9999964
No 115
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.94 E-value=0.0018 Score=63.43 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+-...+.+...+.+++..++.+|+|+|++..++.++.+++.+...+.. +.+..++...+.
T Consensus 34 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 93 (379)
T TIGR00881 34 LLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--------------------SLWVMAALWALN 93 (379)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHH
Confidence 345566667778888889999999999999999888877766544433 556777788888
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+.....-.+++++..++ ++.|..+|+.+....+++
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~ 132 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSR--SERGTWVSFWNCSHNVGG 132 (379)
T ss_pred HhhccccCCchHHHHHHhcCH--hhheeeEeehhccchhHH
Confidence 999888888888888887763 456677777776655543
No 116
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=96.91 E-value=0.0044 Score=62.83 Aligned_cols=144 Identities=12% Similarity=0.032 Sum_probs=91.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
..|+.+....+.+++.-++......|.+.+..+ ++.++. +. .+.+..+.+...+.+++..++.+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~~-------------~~-g~~~~~~~~~~~i~~~~~g~l~d 73 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--LGLSPQ-------------QS-ASAFTLYGIAAAISAWISGVVAE 73 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--hCCCHH-------------Hh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888888777766555556665532 333321 22 34466777778888899999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccC
Q 015467 306 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 385 (406)
Q Consensus 306 ~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~ 385 (406)
|+|+|++...+.++.++++....+..... + +.+..++...+.|+..+.......+.+.+..+
T Consensus 74 r~g~k~~l~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~-- 135 (402)
T TIGR00897 74 IIGPLKTMMIGLLLWCVGHAAFIVFGLGH-------------A---NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTK-- 135 (402)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHhccC-------------c---cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCC--
Confidence 99999999999888877654332221100 0 44555566666787776554433444444433
Q ss_pred CCCcceeehhhhhhhhcc
Q 015467 386 GGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 386 ~~~~G~~mgllN~~i~lp 403 (406)
+++.|..+|+.+....++
T Consensus 136 ~~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 136 QDNLSSAVGWFWAVYSIG 153 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345677777777655443
No 117
>TIGR00895 2A0115 benzoate transport.
Probab=96.87 E-value=0.0046 Score=61.09 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
...+.+...+.+++..++.+|+|+|++..++.++.+++.....+.. +.+..++...+.|+
T Consensus 58 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~ 117 (398)
T TIGR00895 58 FSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT--------------------NVTQLLILRFLAGL 117 (398)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc--------------------chHHHHHHHHHHhc
Confidence 4455566777788889999999999999999888776655443322 45666777788899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.++.....-.+++++..++ +..|..+|+.+....++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g 153 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPK--RFRGTAVGLMFCGYPIG 153 (398)
T ss_pred ccccchhhHHHHHHHHcCH--HhhchhHhhHhhHHHHH
Confidence 9998888888999988763 34566677766665544
No 118
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.84 E-value=0.0048 Score=63.52 Aligned_cols=100 Identities=13% Similarity=0.175 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.|....+.+...+...+..++.+|+|+|+++.++.++++++.....+.. +.+..++...+
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~ 99 (485)
T TIGR00711 40 QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP--------------------NLELMIIFRVI 99 (485)
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC--------------------CHHHHHHHHHH
Confidence 3556677778888888899999999999999999888876654333221 55667778888
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.|+..+.....-.+++.+..+. ++.|..+|+.++...+++
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~ 139 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPP--EKRGRAMAIWGLTVLVAP 139 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHh
Confidence 8999998888888999888753 455777888777766554
No 119
>PRK10504 putative transporter; Provisional
Probab=96.82 E-value=0.0041 Score=64.14 Aligned_cols=135 Identities=10% Similarity=-0.025 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
..+.++...|+..+....+......+..+ ++.++. . ..+....+.+...+...+..++.+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 74 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS--LGESPL-------------H-MHMVIVSYVLTVAVMLPASGWLADRVGV 74 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH--hCcCHH-------------H-HHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 45666777777666655555444444332 333321 1 2244556666667778888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCc
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
|++...+.++++++.+...+.. +.+..++.-.+.|+..+.....-.+++.++.++ ++.
T Consensus 75 r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~ 132 (471)
T PRK10504 75 RNIFFTAIVLFTLGSLFCALSG--------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR--EQY 132 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH--HHH
Confidence 9999999888876665433321 456667778888999888877777777777653 345
Q ss_pred ceeehhhhhhhhc
Q 015467 390 GLAIGVLNLAIVI 402 (406)
Q Consensus 390 G~~mgllN~~i~l 402 (406)
|..+|+.+....+
T Consensus 133 ~~~~~~~~~~~~~ 145 (471)
T PRK10504 133 MAAMTFVTLPGQV 145 (471)
T ss_pred HHHHHHHHHHHHH
Confidence 6667776654433
No 120
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.80 E-value=0.0048 Score=63.34 Aligned_cols=98 Identities=15% Similarity=0.035 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+++..++.+|+|+|++..++.++.+++.+...+.. +.+..+++..+.
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~ 121 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS--------------------SLWAFALLWVLN 121 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHH
Confidence 345567777788888999999999999999999988887766544433 455555555567
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++.+..+ +++.|..+|+.+....++
T Consensus 122 g~~~g~~~~~~~~~~~~~~~--~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYS--RTERGGWWAIWNTAHNVG 159 (434)
T ss_pred HHHHHccchHHHHHHHHhCC--HHHHHHHHHHHHHHHHHH
Confidence 77777655555677777665 345677788887665443
No 121
>PRK12307 putative sialic acid transporter; Provisional
Probab=96.78 E-value=0.0088 Score=60.60 Aligned_cols=98 Identities=12% Similarity=-0.008 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+.+..++.+|+|+|++..++.++.+++.+...+.. +.+..++.-.+.
T Consensus 57 ~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 116 (426)
T PRK12307 57 FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--------------------GVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHH
Confidence 334456666777788889999999999999999999887776555543 566777778899
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++.+..++ ++.|..+|+.+....++
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPK--HLKSKASAFLVSGFGIG 154 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCH--hHhhHhhhHHHHHHhHH
Confidence 999999888888888887663 34566677766654443
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.75 E-value=0.01 Score=59.58 Aligned_cols=144 Identities=8% Similarity=-0.070 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.+..+++.++++-++..-...+.+.++.+ .++.++. .. .+.+..+.+..++.+.+..++.+|+|
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-~~g~s~~-------------~~-g~~~~~~~~~~~i~~~~~G~l~Dr~g 79 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHD-QLGFSAF-------------LA-GLVISLQYLATLLSRPHAGRYADTLG 79 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCccHH-------------HH-HHHHHHHHHHHHHhchhhHhHHhccC
Confidence 467778888888888876666666666654 2332221 22 35566777788888899999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|++..++.++.+++.....+.... ++ . ...+.+..++.-.+.|+..+.......+++.+..++ ++
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~--~~----~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--~~ 145 (399)
T PRK05122 80 PKKAVVFGLCGCALSGLLYLLAGLL--AA----W------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGA--LH 145 (399)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhh--hc----c------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcCh--hh
Confidence 9999999988776554433332211 00 0 000334556666788998888877777777776553 34
Q ss_pred cceeehhhhhhhh
Q 015467 389 QGLAIGVLNLAIV 401 (406)
Q Consensus 389 ~G~~mgllN~~i~ 401 (406)
.|..+|+.+.+..
T Consensus 146 r~~~~~~~~~~~~ 158 (399)
T PRK05122 146 TGRVISWNGIATY 158 (399)
T ss_pred hccchhhhhhhhh
Confidence 4566666655443
No 123
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=96.75 E-value=0.0042 Score=63.95 Aligned_cols=111 Identities=14% Similarity=0.039 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+..++.+++..++.+|+|||+++.++.++++++.+...+..+.... ...++.......++.=.+.
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS--------IGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc--------ccccchhHHHHHHHHHHHH
Confidence 55667778888899999999999999999999999988776654442110000 0001111233445566888
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+..+....++++|+.++ ++.|..+|+.+....+++
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~--~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPA--HIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCCh--hhhhHHHHHHHHHHHHHH
Confidence 999999999999999999874 456778898887766654
No 124
>PRK03545 putative arabinose transporter; Provisional
Probab=96.74 E-value=0.0043 Score=62.42 Aligned_cols=98 Identities=14% Similarity=0.149 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+++...+.+|+|+|+++.++.++++++...+.+.. +.+..++.-.+.
T Consensus 48 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~~~ 107 (390)
T PRK03545 48 LMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--------------------NFTVLLISRIGI 107 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 444566666677778888999999999999999988887766555443 667777777788
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++.+..++ ++.|..+|+++....++
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~--~~r~~~~g~~~~~~~~g 145 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPA--GKKAQALSLLATGTALA 145 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCh--hhhhhHHHHHHHHHHHH
Confidence 988888877778888887664 34566677776655443
No 125
>PRK12382 putative transporter; Provisional
Probab=96.70 E-value=0.013 Score=58.90 Aligned_cols=144 Identities=8% Similarity=-0.041 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.+..+...+++..++.--..-....++.+ -++-|+. ..| +.+..+.+...+.+.+..++.+|+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~lg~s~~-------------~~g-~~~s~~~~~~~i~~~~~G~l~Dr~g 79 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHH-DLGFGNT-------------MVG-IAVGIQFLATVLTRGYAGRLADQYG 79 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHH-hcCCcHH-------------HHH-HHHHHHHHHHHHHhhhhhHHHHhhc
Confidence 455666667777766644333334444443 1232322 233 3355677778888889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|+++.++.++.+++.+...+.... ... ...+.+..++.-.+.|+..+.......+++.+..++ ++
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~--~~ 145 (392)
T PRK12382 80 AKRSALQGMLACGLAGLAYLLAAIL-PVS-----------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP--KH 145 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcc-ccc-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc--cc
Confidence 9999999988776654332222110 000 001455666777788988887776667777776653 45
Q ss_pred cceeehhhhhhhh
Q 015467 389 QGLAIGVLNLAIV 401 (406)
Q Consensus 389 ~G~~mgllN~~i~ 401 (406)
.|..+|++.....
T Consensus 146 r~~a~~~~~~~~~ 158 (392)
T PRK12382 146 SGKVMSWNGMAMY 158 (392)
T ss_pred cchhhhHHHHHHH
Confidence 5666776655443
No 126
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.70 E-value=0.01 Score=59.89 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|..+.++...|+-+.+|..++-+.+.|+.+ .++.++. ..| +.+.++++...+.+.+..++.+|+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-------------~~g-~~~~~~~l~~~i~~~~~G~l~Dr~g 66 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-VNGLSKT-------------DTG-IVFSCISLFSILFQPLFGLISDKLG 66 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 567788888888888888888888888766 3443332 222 4577788888889999999999999
Q ss_pred chHHHHHHHHHHHHHH
Q 015467 309 SRLVWAISNFIVFACM 324 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~ 324 (406)
+|+....+.+..+++.
T Consensus 67 rr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 67 LKKHLLWIISGLLVLF 82 (396)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9999988877665443
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.64 E-value=0.015 Score=58.29 Aligned_cols=140 Identities=14% Similarity=0.061 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~ 309 (406)
....+++.+|+.-+++..+..+...|..+ ++-++.. ..+ .+-.+.+.++.+...+.+.+..++.+|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~~------~~~---~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ--LGVTGHS------ALN---MWSGLVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH--hCCccch------hHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 45667778888877777777677766654 3323210 011 111244566677778888888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCc
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
|+++.++.++.+++++...+.. +.+..++...+.|+.-+ ....-.+++.+..+ +++.
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~--~~~~ 140 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQ--------------------NIWQFLILRALLGLLGG-FVPNANALIATQVP--RNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcC--Hhhh
Confidence 9999998887776655433322 45555666666776543 22222344455444 3445
Q ss_pred ceeehhhhhhhhcc
Q 015467 390 GLAIGVLNLAIVIP 403 (406)
Q Consensus 390 G~~mgllN~~i~lp 403 (406)
|..+|+.+....++
T Consensus 141 ~~~~~~~~~~~~~g 154 (408)
T PRK09874 141 GWALGTLSTGGVSG 154 (408)
T ss_pred hHHHHHHHHHHHHH
Confidence 66677776654443
No 128
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.63 E-value=0.0086 Score=62.04 Aligned_cols=98 Identities=15% Similarity=0.063 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+.+..+.+...+..++..++.+|+|+|++..++.++.+++.+...+.. +.+..++...+.
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~ 118 (496)
T PRK03893 59 SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP--------------------GYWTLFIARLVI 118 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHH
Confidence 445556667777788889999999999999999988877665544432 556777888899
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++.++.+. ++.|..+|+.+....++
T Consensus 119 G~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 119 GMGMAGEYGSSATYVIESWPK--HLRNKASGFLISGFSIG 156 (496)
T ss_pred HHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHH
Confidence 999998888888888887653 34455566666654443
No 129
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.61 E-value=0.0089 Score=68.61 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.++.++++++++-++-..+..-...++-+ .|+.+. .+ ....+...++.+..++.+++...+.+|+|
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~-~~~~~~~~~~~l~~~l~~~~~G~l~Dr~g 75 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIK-AYDGSE-----------QV-ILTAIVNALFLLPFLLLSSPAGFLADKFS 75 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHH-HcCccc-----------HH-HHHHHHHHHHHHHHHHHhhhHhhhccccc
Confidence 466777888888766554443333333322 122110 11 22345566777777888889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|+++.++.++.++..+.+.+.... .+.+..+++..+.|+..+.....-++++++..++ ++
T Consensus 76 rk~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~ 136 (1146)
T PRK08633 76 KNRVIRIVKLFEVGLTLLIVLAYYL-----------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK--EN 136 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc--cc
Confidence 9999998877655444433332211 1456778888889999998888888999998764 45
Q ss_pred cceeehhhhhhhhcc
Q 015467 389 QGLAIGVLNLAIVIP 403 (406)
Q Consensus 389 ~G~~mgllN~~i~lp 403 (406)
.|..+|+++....++
T Consensus 137 r~~~~~~~~~~~~ig 151 (1146)
T PRK08633 137 LSRANGLLEAFTIVA 151 (1146)
T ss_pred chhhhhHHHHHHHHH
Confidence 566677776665544
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.59 E-value=0.0074 Score=59.00 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+++..++.+|+|+|+++.++.++.+++.....+.. +.+..++...+.
T Consensus 42 ~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 101 (377)
T TIGR00890 42 IWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--------------------SLAALYLTYGLA 101 (377)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHH
Confidence 445667777788888899999999999999999988887766555443 556666777788
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.........+.++.+ ++.|..+|+.+....++
T Consensus 102 g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFP---DKRGLASGIIIGGYGLG 138 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcC---cccHHHHHHHHHhcchh
Confidence 99888877766666666554 34567777777665443
No 131
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.58 E-value=0.0099 Score=58.58 Aligned_cols=130 Identities=11% Similarity=0.100 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k 310 (406)
.+..|+..+.+-..|+.+..+...++.+ .++-++. . -.+....+.+...+.+++..++.+|+|+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~-------------~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~r 67 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKD-DLGLSTA-------------Q-LGNLVAVPVLAGAVLRIILGFLVDKFGPR 67 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHH-HhCCCHH-------------H-hhHhhHHHHHHHHHHHHHHHHHHHHhCch
Confidence 3445556655555555555555544444 3443322 1 13445667777888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcc
Q 015467 311 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 390 (406)
Q Consensus 311 ~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G 390 (406)
++..++.++.+++.+...+.. + +.+..++...+.|+..+. ...-.+++++..++ ++.|
T Consensus 68 ~~~~~~~~~~~i~~~~~~~~~----------------~---~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~--~~r~ 125 (366)
T TIGR00886 68 YTTTLSLLLLAIPCLWAGLAV----------------Q---SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK--KIQG 125 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----------------h---hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH--hhhh
Confidence 999999888877665444332 0 234445555666776443 33345667766553 3445
Q ss_pred eeehhhh
Q 015467 391 LAIGVLN 397 (406)
Q Consensus 391 ~~mgllN 397 (406)
..+|+.+
T Consensus 126 ~~~~~~~ 132 (366)
T TIGR00886 126 TALGLAA 132 (366)
T ss_pred HHHHHHH
Confidence 5566655
No 132
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.58 E-value=0.0089 Score=59.15 Aligned_cols=98 Identities=15% Similarity=0.148 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+++..++.+|+|+|++..++.++.+++.+...+.. +.+...+...+.
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 103 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--------------------NIETLLVLRFVQ 103 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 445566667777888889999999999999999888876665444332 556667778889
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.....-.+++.++.++ ++.|..+|+.+....++
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 141 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPG--EELSRIYSILMPVLALA 141 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHH
Confidence 999998888888999988763 45667777777665544
No 133
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.58 E-value=0.0099 Score=60.17 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHH
Q 015467 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 361 (406)
Q Consensus 282 Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (406)
..+....+.+...+.+.+.+++.+|+|+|++...+.++++++++...+.. +.+..++.-.
T Consensus 46 ~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--------------------~~~~ll~~r~ 105 (393)
T PRK09705 46 AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--------------------QSALLLSSAL 105 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--------------------chHHHHHHHH
Confidence 34556666777778888889999999999999999999998877655543 5567777888
Q ss_pred HhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhh
Q 015467 362 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 362 ~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~ 401 (406)
+.|+.-+.......+++.++.+ ++.|..+|+++.+..
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~ 142 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ---QRTPLVMGLWSAALM 142 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc---ccchhHHHHHHHHHH
Confidence 8899999888888888877654 345777888776543
No 134
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=96.57 E-value=0.0081 Score=61.32 Aligned_cols=98 Identities=12% Similarity=-0.052 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+..++..++..++.+|+|+|++..++.++++++...+.+.. +.+..++.-.+.
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 106 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--------------------GPESLYLLRILV 106 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHH
Confidence 334455666677778888999999999999999999887776555543 556677777889
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++++..+. ++.|..+|+++....++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~--~~rg~~~~~~~~~~~~g 144 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPA--YFRARANALFMIAMPVT 144 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHH
Confidence 999998876666777777653 34566778777665443
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=96.53 E-value=0.013 Score=59.06 Aligned_cols=98 Identities=17% Similarity=0.090 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+-...+.+...+..++..++.+|+|+|++..++.++.+++.+...+.. +.+..++...+.
T Consensus 54 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 113 (406)
T PRK11551 54 WAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--------------------DFPSLLVARLLT 113 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 445556666777788889999999999999999888776654433332 567777888889
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
|+..+.......+++.+..++ ++.|..+|+++....++
T Consensus 114 G~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 114 GVGLGGALPNLIALTSEAVGP--RLRGTAVSLMYCGVPFG 151 (406)
T ss_pred HhhHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHH
Confidence 999988888888888887653 45567777777765543
No 136
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.50 E-value=0.0069 Score=62.57 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=72.2
Q ss_pred ccCCccccccCCCCccchhhhhH----HHHHHhhhcccc----chhhHH-----H--------HHhcCCCchhhhhHHHH
Q 015467 19 LGDTKEHCSKFRGTRTRAAFVFV----IGFWLLDLANNT----VQGPAR-----A--------LLADLSGPDQRNSANAI 77 (406)
Q Consensus 19 lgd~~~~~~~~~g~~~~~I~~~v----~g~~llD~s~n~----~q~P~R-----A--------li~D~~p~~qq~~a~a~ 77 (406)
+|..||||++++|||||+|+... +++.++=++.|+ ...|.+ | .+.|++..--|.-+=+.
T Consensus 87 vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~ 166 (498)
T KOG0637|consen 87 VGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRAL 166 (498)
T ss_pred ccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHH
Confidence 57899999999999999999874 344444333332 222222 2 23444443322211111
Q ss_pred -------------HHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCC
Q 015467 78 -------------FCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 144 (406)
Q Consensus 78 -------------~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~ 144 (406)
+..+.++-..+|+.+|.. .+ .-.+.+.+..|.....+.+.|+..+..++.|.++
T Consensus 167 L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~----------~g---~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L 233 (498)
T KOG0637|consen 167 LADLARGDAKKTRANSVFSFFMAVGNVLGYA----------LG---SYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTL 233 (498)
T ss_pred HHHhccChhhhhccchhHHHHHHhcceeeee----------cc---cccCceEEeehHHHHHHHHHHHHHHHHHHHhhhh
Confidence 122333333444444432 11 1234578899999999999999999999999988
Q ss_pred CCCCCC
Q 015467 145 TVNQPN 150 (406)
Q Consensus 145 ~~~~~~ 150 (406)
....+.
T Consensus 234 ~~i~~~ 239 (498)
T KOG0637|consen 234 LLIETS 239 (498)
T ss_pred hheecc
Confidence 776543
No 137
>TIGR00898 2A0119 cation transport protein.
Probab=96.45 E-value=0.0059 Score=63.55 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+...++.+...+.+++..++.+|+|+|+++.++.++.+++.+.+.+.. +.+..++.-.+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~r~l 189 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--------------------NYTVFLVFRLL 189 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--------------------cHHHHHHHHHH
Confidence 4556667777788888899999999999999999888876655444332 56777888889
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
.|+..+....+.+++++++.+.+ +.|..+++.+.+..+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~ 227 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKK--QRAIVGTLIQVFFSL 227 (505)
T ss_pred HHhhccchHHHHHHHhheecChh--hhHHHHHHHHHHHHH
Confidence 99999999999999999988743 345555665554443
No 138
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=96.42 E-value=0.0077 Score=61.13 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+...+..++.+|+|+|+++.++.++++++.....+.. +.+..++.-.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 118 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--------------------SFSLLLIGRACL 118 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--------------------hHHHHHHHHHHH
Confidence 334556677777888889999999999999999999987665443322 667777888899
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
|+..+.......+++.++.++ ++.|..+|+++....+
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~--~~~~~a~~~~~~~~~~ 155 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPP--RTVPKALSVIFGAVSI 155 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCH--hHHHHHHHHHHHHHHH
Confidence 999999888888888887753 4556666666654433
No 139
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.41 E-value=0.012 Score=52.49 Aligned_cols=100 Identities=11% Similarity=0.184 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 280 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 280 r~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
+.|..++.+.-.+..+.+++.|.+++++|.|+..++|.+.+++- ....+ . | +.+..+..
T Consensus 37 ~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y-~~~~~-~----------------~---~~~~l~~~ 95 (156)
T PF05978_consen 37 GLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY-IASFF-Y----------------P---NSYTLYPA 95 (156)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH-HHHHH-h----------------h---hHHHHHHH
Confidence 34667777777778888899999999999999999998887632 22222 1 2 55777788
Q ss_pred HHHhhhHHHHHhhchhhhhhcccccC--CCCcceeehhhhhhh
Q 015467 360 FTLLGFPLAITYSVPFAITAELTADS--GGGQGLAIGVLNLAI 400 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl~~~~~~~--~~~~G~~mgllN~~i 400 (406)
.++.|++-+.+-...=..+.++.+++ +|..|+.-++.++..
T Consensus 96 s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~ 138 (156)
T PF05978_consen 96 SALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSL 138 (156)
T ss_pred HHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHH
Confidence 88999998887777777777765432 334455555555443
No 140
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=96.38 E-value=0.007 Score=66.95 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
...+.+..++.+++...+.+|+|||++.+++.++++++.+.+.+.. +.+..++.-.+.|+
T Consensus 208 ~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--------------------s~~~llv~R~l~G~ 267 (742)
T TIGR01299 208 GLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--------------------GYGFFLFCRLLSGF 267 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHHH
Confidence 4445566777888889999999999999999888876655444432 55667778889999
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
..+....+.++++++..+. +..|..+|+++.+..++
T Consensus 268 g~g~~~p~~~~~isE~~p~--~~Rg~~~g~~~~~~~iG 303 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQ--EKRGEHLSWLCMFWMIG 303 (742)
T ss_pred HHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHH
Confidence 9999999999999998763 45566777777665443
No 141
>TIGR00893 2A0114 d-galactonate transporter.
Probab=96.35 E-value=0.0049 Score=60.31 Aligned_cols=99 Identities=18% Similarity=0.063 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+++...+.+|+|+|++..++.++.+++.....+.. +.+..++...+.
T Consensus 33 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 92 (399)
T TIGR00893 33 YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--------------------AYVSLYILRVLL 92 (399)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--------------------CHHHHHHHHHHH
Confidence 456667777788888899999999999999999888776655444332 567777888899
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+.......+++++..++ ++.|..+|+.+....+++
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~g~ 131 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPA--SERATAVSIFNSAQGLGG 131 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCH--HHHHHHHHHHHHhchHHH
Confidence 999998888888888888763 345666777766655443
No 142
>PRK03699 putative transporter; Provisional
Probab=96.31 E-value=0.022 Score=57.50 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
...+.+...+.+++.+++.+|+|+|++...+.++.+++.+.+.+.. +.+..++...+.|+
T Consensus 48 ~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--------------------~~~~~~~~~~l~G~ 107 (394)
T PRK03699 48 FTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--------------------SLALFSIAMFVLGV 107 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--------------------hHHHHHHHHHHHHH
Confidence 4445566677778889999999999999988888776655444322 55666777788899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
..+.....-.+++.+..++ ++.|..+++.+.+
T Consensus 108 ~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~ 139 (394)
T PRK03699 108 VSGITMSIGTFLITHVYEG--KQRGSRLLFTDSF 139 (394)
T ss_pred hhHhhccchhHHhhhhccc--chHHHHHHHHHHH
Confidence 9888887777888877653 3455556655543
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.29 E-value=0.0099 Score=60.00 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+....+.+...+.+.+..++.+|+|+|++..++.++++++.....+... ..+.+..++.-.+
T Consensus 74 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~r~l 136 (481)
T TIGR00879 74 GLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF-----------------ALSVEMLIVGRVL 136 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc-----------------ccchHHHHHHHHH
Confidence 34456677788888899999999999999999998888766554433220 0133466777888
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
.|+..+.......+++++..++ ++.|..+|+++.+..++++
T Consensus 137 ~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~ 177 (481)
T TIGR00879 137 LGIGVGIASALVPMYLSEIAPK--ALRGALTSLYQLAITFGIL 177 (481)
T ss_pred HHhhhhHHHhHHHHHHHccCCh--hhhhhhhhHHHHHHHHHHH
Confidence 9999999988889999988764 4567778888877666543
No 144
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.28 E-value=0.021 Score=58.38 Aligned_cols=223 Identities=15% Similarity=0.081 Sum_probs=128.0
Q ss_pred hhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
.+..-+++.-..|+++|..|++++. +.++|..+.-+++-. .-..+++ ...+.+..+-.+.++++.+.
T Consensus 122 Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~--v~~~~g~----------~~w~~~~~i~~~~l~v~~v~ 188 (417)
T COG2223 122 FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL--VAVAFGF----------LAWRNVAGIYVVALAIAAVL 188 (417)
T ss_pred ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH--HHHHHhh----------HHHHHHHHHHHHHHHHHHHH
Confidence 3445566778899999999999999 888888887666421 1111110 01344445555555555555
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCch
Q 015467 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (406)
Q Consensus 135 Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (406)
..+..++.|-..+..+. ..+
T Consensus 189 ~~~~~~d~p~~r~~~~~-----------------------------------------------------------~~~- 208 (417)
T COG2223 189 AWLGMNDVPEHRASVKP-----------------------------------------------------------QLP- 208 (417)
T ss_pred HHHHhCCChhhhccccc-----------------------------------------------------------cch-
Confidence 55555654421111000 000
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHH
Q 015467 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (406)
Q Consensus 215 ~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~ 294 (406)
..++.+++. +..|++|+..+.+.=++..+..+...|.-. .|+-|+. ..|-++. .+.+...
T Consensus 209 ~~~~~v~~~-----~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~-~fg~~~~-------------~Ag~~a~-~f~~~g~ 268 (417)
T COG2223 209 AQLKAVFSN-----KDTWLLSLLYFATFGGFVGFSAYLPMYLVT-QFGLSPV-------------TAGLIAF-LFPLIGA 268 (417)
T ss_pred hHHHHHhcC-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh-------------hHHHHHH-HHHHHHH
Confidence 123334433 678999999999999999999888877654 6776554 1121211 1112222
Q ss_pred HHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhch
Q 015467 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 374 (406)
Q Consensus 295 v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siP 374 (406)
+.=-+=..+.+|+|.+|+-.+.....++|++ ...+....+ .+ ++ +....+..+-.+++..+.-+--=
T Consensus 269 l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~---~l~~~~~~~-----~~--~~---~~~~~~~~~l~l~~~~G~GnGsv 335 (417)
T COG2223 269 LARPLGGWLSDRIGGRRVTLAVFVGMALAAA---LLSLFLTGF-----GH--GG---SFVVFVAVFLALFVFAGLGNGSV 335 (417)
T ss_pred HHHhccchhhhhccchhHHHHHHHHHHHHHH---HHHcccccc-----cc--Cc---chHHHHHHHHHHHHHhccCcchh
Confidence 2212224678999988887766555554443 333221110 00 11 45566666677777777777777
Q ss_pred hhhhhcccc
Q 015467 375 FAITAELTA 383 (406)
Q Consensus 375 faLl~~~~~ 383 (406)
|.++..+-+
T Consensus 336 fk~Ip~if~ 344 (417)
T COG2223 336 FKMIPVIFP 344 (417)
T ss_pred eeechHHHH
Confidence 888888764
No 145
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.26 E-value=0.27 Score=53.13 Aligned_cols=141 Identities=11% Similarity=0.141 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Q 015467 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (406)
Q Consensus 228 P~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~i 307 (406)
++.+...+++.|+.=+-|+++..+++..+.. +|+.|+... .+.| +-...+++...+.+.++..+.+++
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~-vf~~d~~~~------~~~~-----~~s~~~~fg~~~g~~i~g~l~~~i 376 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVN-VFGSDPISI------TEIG-----WISSPVGFGSCAGAVILGLLFSKI 376 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccCCCccc------ceee-----hhhhhHHHHHHHHHHHHHHHHHHc
Confidence 4556666677776666677777777776665 887777521 0111 112223444445556677777766
Q ss_pred Cc-hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 308 GS-RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 308 g~-k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
++ |...+++.+++.++..+++.+. |+..+...++..++.+|+.|+....+. +.+..-. +
T Consensus 377 r~~Kw~li~~~~~~ta~~Gama~~~----------------~~n~~~~i~~~~l~g~giG~~~~~~~~---~~ql~~p-~ 436 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAMAAVR----------------PDNKNAAIAFLVLAGFGIGGILVPAIV---IAQLIVP-D 436 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHcc----------------CCCcchHHHHHHHHHHhHHHHHHHHHH---eeEeeeC-c
Confidence 54 5554556555544333333322 222233445555666677776554432 3333221 3
Q ss_pred CCcceeehhhhhhh
Q 015467 387 GGQGLAIGVLNLAI 400 (406)
Q Consensus 387 ~~~G~~mgllN~~i 400 (406)
+..|+..|+.-+.-
T Consensus 437 ~~ig~a~gL~~s~R 450 (599)
T PF06609_consen 437 EDIGTATGLTGSIR 450 (599)
T ss_pred hHHHHHHHHHHHHH
Confidence 56777666654443
No 146
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.26 E-value=0.038 Score=58.34 Aligned_cols=84 Identities=11% Similarity=0.115 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 015467 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (406)
Q Consensus 227 mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ 306 (406)
.|+.+..++.++++..++++.+..+.+.|+-+. ++-++. ..+ ..+..+.+...+.+++-..+.+|
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-lgls~~-------------~a~-~i~~~~~~~~~l~~ligG~LaDR 71 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-LKYDDN-------------HAY-ELFSAYCSLVYVTPILGGFLADK 71 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999998888888877652 221211 122 23555666667777888899999
Q ss_pred c-CchHHHHHHHHHHHHHHH
Q 015467 307 I-GSRLVWAISNFIVFACMA 325 (406)
Q Consensus 307 i-g~k~~~~~s~~~fai~~~ 325 (406)
+ |+|++..++.++.+++.+
T Consensus 72 ilGrrr~iliG~il~~lg~l 91 (493)
T PRK15462 72 VLGNRMAVMLGALLMAIGHV 91 (493)
T ss_pred ccCcHHHHHHHHHHHHHHHH
Confidence 8 999999988888776543
No 147
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.26 E-value=0.019 Score=56.70 Aligned_cols=128 Identities=16% Similarity=0.045 Sum_probs=67.3
Q ss_pred HHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHH
Q 015467 236 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 315 (406)
Q Consensus 236 ~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~ 315 (406)
+..|+..+++--+.-+.+.|+.+ -++.++. ..| +.+..+.+...+.+.+..++.+|+|+|+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~~-------------~~g-~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 68 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSE-EVRARPA-------------MIG-LFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL 68 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHc-ccCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence 44566666666666666666544 2332221 222 33456666777778888999999999988765
Q ss_pred H-HHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeeh
Q 015467 316 S-NFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 394 (406)
Q Consensus 316 s-~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mg 394 (406)
. .++.+++.....+.. +.+..++.-.+.|...+.....-.++..++.++++|..+...|
T Consensus 69 ~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 128 (375)
T TIGR00899 69 FCCLLAALACLLFAWNR--------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSS 128 (375)
T ss_pred HHHHHHHHHHHHHHhcc--------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHH
Confidence 4 334333322222211 4444444444556555554433345555654443344333345
Q ss_pred hhhh
Q 015467 395 VLNL 398 (406)
Q Consensus 395 llN~ 398 (406)
+.+.
T Consensus 129 ~~~~ 132 (375)
T TIGR00899 129 VMRA 132 (375)
T ss_pred HHHH
Confidence 4443
No 148
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.25 E-value=0.022 Score=59.55 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=63.8
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 291 iv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
+...+.+++..++.+|+|||++..++.++++++.+.+.+.. +|. . +| ...+...++.=.+.|+..+..
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~-----~~~----~-~g--~~a~~~l~~~R~l~G~g~g~~ 135 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP-----SYA----T-IG--IWAPILLLLCKMAQGFSVGGE 135 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc-----cHH----H-HH--HHHHHHHHHHHHHHHhHhHhh
Confidence 44556677888999999999999999999987766555432 000 0 00 000112455666889999999
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
...-.+++++..++ ++.|..+|+.+..
T Consensus 136 ~~~~~~~~~e~~p~--~~Rg~~~~~~~~~ 162 (490)
T PRK10642 136 YTGASIFVAEYSPD--RKRGFMGSWLDFG 162 (490)
T ss_pred HHHHHHHHHHhCCC--CCCcHHHHHHHHH
Confidence 88889999998764 3445566666543
No 149
>PRK09952 shikimate transporter; Provisional
Probab=96.23 E-value=0.027 Score=57.95 Aligned_cols=95 Identities=8% Similarity=0.141 Sum_probs=61.4
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCccccCCCcchhhHHHHHHHHHhhhHHHHHh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYS-GGIEHGIGANQAIKVASLVVFTLLGFPLAITY 371 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~ 371 (406)
..+.+++..++.+|+|||++..++.++++++.+.+.+.. +|. .++ -..+..+++=.+.|+..+...
T Consensus 77 ~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~~l~~~R~l~G~~~g~~~ 143 (438)
T PRK09952 77 RPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP-----SFSTIGW--------WAPVLLVTLRAIQGFAVGGEW 143 (438)
T ss_pred HhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC-----cHHHHHH--------HHHHHHHHHHHHHHhhhcccH
Confidence 446667788999999999999999999887665554432 000 000 001134445567888888776
Q ss_pred hchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 372 SVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 372 siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
..-.++++|..++ ++.|..++..+....+
T Consensus 144 ~~~~~~~~e~~p~--~~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 144 GGAALLAVESAPK--NKKAFYSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHhCCC--CCCcHHHHHHHHHHHH
Confidence 6667788887664 3446777777665544
No 150
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.20 E-value=0.028 Score=56.46 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+.+..+.+...+.+.+..++.+|+|+|++..++.++.+++.+...+.. +.+..++...+
T Consensus 46 ~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~ 105 (394)
T PRK11652 46 QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--------------------SLTVLIAASAI 105 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHH
Confidence 3445567777778888889999999999999999888776655433321 45666677778
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
.|+.++.......+++.+..+ +++.+..+++.+....+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 143 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYE--GTQLRHANSLLNMGILV 143 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHH
Confidence 888888777777777766544 24556666666666544
No 151
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.19 E-value=0.036 Score=57.83 Aligned_cols=90 Identities=18% Similarity=0.148 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
...+.+...+..++..++.+|+|+|++..++.++.+++++.+.+.. +.+..++...+.|+
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------------------s~~~l~~~r~l~G~ 136 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS--------------------SATGFIAVRFFIGF 136 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHHHH
Confidence 3445555666778889999999999999988888777665444432 44555555667787
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhh
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNL 398 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~ 398 (406)
..+... .....++++.+ +++.|..+|+.|.
T Consensus 137 ~~~~~~-~~~~~i~~~~~--~~~rg~a~g~~~~ 166 (476)
T PLN00028 137 SLATFV-SCQYWMSTMFN--GKIVGTANGIAAG 166 (476)
T ss_pred HHHhhH-HHHHHHHHhcC--hhheeHHHHHHHH
Confidence 766532 23345666655 3466777777764
No 152
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.18 E-value=0.017 Score=60.67 Aligned_cols=76 Identities=18% Similarity=0.227 Sum_probs=49.1
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l 128 (406)
++......-.=.+++|++++++|..+-.+ ..+.-.|+.++...++.. .. +-|..+.+.++..
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~-~~----------------~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYI-TR----------------DWRWLFWIISIPS 244 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHH-Hh----------------hHHHHHHHHHHHH
Confidence 56666777777889999999999999988 666666666665555430 11 2355556655555
Q ss_pred HHHhhheeeEeeccC
Q 015467 129 TLCALVTIYFADEVP 143 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p 143 (406)
++.++. .+..+|.|
T Consensus 245 ~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 245 GLFLLL-WFLPPESP 258 (521)
T ss_pred HHHHHH-HHccCcCh
Confidence 555444 33445754
No 153
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.16 E-value=0.025 Score=57.57 Aligned_cols=80 Identities=11% Similarity=0.115 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+..+.+.+..|+.+.+|-.+.-|...|..+ .++-++. .. .+....+.+...+.+.+..++.+|+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~-------------~~-g~~~s~~~l~~~i~~~~~G~l~Dr~g 74 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-INGLSGT-------------DT-GIIFSANSLFALLFQPLYGLISDKLG 74 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456666677777777776666666666655 2332321 22 23466677788888999999999999
Q ss_pred chHHHHHHHHHHHHH
Q 015467 309 SRLVWAISNFIVFAC 323 (406)
Q Consensus 309 ~k~~~~~s~~~fai~ 323 (406)
+|++..++..+.+++
T Consensus 75 ~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 75 LKKHLLWIISGLLVL 89 (420)
T ss_pred chHHHHHHHHHHHHH
Confidence 999988776665544
No 154
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.12 E-value=0.016 Score=57.02 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=61.9
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhc
Q 015467 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 373 (406)
Q Consensus 294 ~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~si 373 (406)
.+.+++..++.+|+|+|+++.++.++.+++.+...+.. ++.. . + ....+..++.-.+.|+..+.....
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----~~~~----~-~--~~~~~~~~~~r~l~G~~~~~~~~~ 116 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP-----SYAT----I-G--IWAPILLLLARLIQGFSLGGEWGG 116 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC-----Chhh----h-H--HHHHHHHHHHHHHHHhhccccccc
Confidence 45677889999999999999999988876655444322 1000 0 0 000123455557788888877777
Q ss_pred hhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 374 PFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 374 PfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
..+++++..++ ++.|..+++.+....++
T Consensus 117 ~~~~~~~~~~~--~~r~~~~~~~~~~~~~G 144 (394)
T TIGR00883 117 AALYLAEYAPP--GKRGFYGSFQQVGAPVG 144 (394)
T ss_pred cHHHhhhcCCc--ccchHHHHHHHHHHHHH
Confidence 77888887653 45567777776655443
No 155
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.06 E-value=0.024 Score=57.23 Aligned_cols=82 Identities=15% Similarity=0.072 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+.+..+.+...+.+++..++.+|+|+|++..++.++.+++.....+.. +.+..++.-.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l 110 (406)
T PRK15402 51 PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--------------------SIEQFTLLRFL 110 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHH
Confidence 3456667777788888899999999999999999888877655443322 45566666777
Q ss_pred hhhHHHHHhhchhhhhhccccc
Q 015467 363 LGFPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~ 384 (406)
.|+..+....+.++++.++.++
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~ 132 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEE 132 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhCh
Confidence 7888887777788888877653
No 156
>PRK11043 putative transporter; Provisional
Probab=96.05 E-value=0.04 Score=55.44 Aligned_cols=130 Identities=8% Similarity=0.039 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccc--cceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDW--MGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~--vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
++.+++....++.++++.-.|...+ +.+ -++-++ ..-.+.+.++.+...+.+++..++.+|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~-~~~~s~--------------~~~g~~~s~~~~~~~~~~~~~g~l~dr~g 69 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQA-DLQTSA--------------SAVSASLSLFLAGFALGQLLWGPLSDRYG 69 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHCCCH--------------HHHHHHHHHHHHHHHHHHHhhhhHHhhcC
Confidence 4555666666666666655555433 222 122111 11234455666677788888899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|++..++.++.+++.+...+.. +.+..++...+.|+..+......-+++.+..++ ++
T Consensus 70 ~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~--~~ 127 (401)
T PRK11043 70 RKPVLLAGLSLFALGSLGMLWVE--------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA--QK 127 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc--HH
Confidence 99999998888776655444322 455566666777777666655555677776553 23
Q ss_pred cceeehhhh
Q 015467 389 QGLAIGVLN 397 (406)
Q Consensus 389 ~G~~mgllN 397 (406)
.+...+..+
T Consensus 128 ~~~~~~~~~ 136 (401)
T PRK11043 128 ANRVFATIM 136 (401)
T ss_pred HHHHHHHHH
Confidence 333344444
No 157
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=96.05 E-value=0.039 Score=56.90 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+.+..+.+...+.+.+..++.+|+|+|++..++.++++++++...+.... ..+.+..+++..+.
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~----------------~~~~~~~~~~~~l~ 130 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA----------------TSSIAVMFVLLFLC 130 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc----------------cccHHHHHHHHHHH
Confidence 34556667777888889999999999999999998888766544443200 01344556666777
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
|+..+.....--+++.++.+ +++.|..+|++|....+
T Consensus 131 gi~~g~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~ 167 (452)
T PRK11273 131 GWFQGMGWPPCGRTMVHWWS--QKERGGIVSVWNCAHNV 167 (452)
T ss_pred HHHHhccchHHHHHHHHhCC--hHHHHHHHHHHHHHHHh
Confidence 88766543222345555544 34567777887766543
No 158
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.02 E-value=0.014 Score=59.16 Aligned_cols=143 Identities=10% Similarity=0.022 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+..+.+.+.++++.++......+...++.+ +++++. .. .+....+.+...+.+.+..++.+|+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~-------------~~-g~~~~~~~l~~~~~~~~~G~l~dr~g 80 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQIQM--MTGSTL-------------QV-GLSVTLTGGAMFIGLMVGGVLADRYD 80 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCHH-------------HH-HHHHHHHHHHHHHHHHhhHHHhhhcC
Confidence 567788889999999887777776666544 222211 22 34455666777788888899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
+|++..++.++.++++....+..+.. . + +.+..++...+.|+..+.....-.+++.+..++ ++
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~-----------~---~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~ 143 (417)
T PRK10489 81 RKKLILLARGTCGLGFIGLALNAFLP-E-----------P---SLLAIYLLGLWDGFFGSLGVTALLAATPALVGR--EN 143 (417)
T ss_pred CceEEEehHHHHHHHHHHHHHHHHcC-C-----------C---cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH--HH
Confidence 99999888887776655433322110 0 0 345555666667777666555555666666553 34
Q ss_pred cceeehhhhhhhhccc
Q 015467 389 QGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 389 ~G~~mgllN~~i~lpQ 404 (406)
.|..+|+.+....+++
T Consensus 144 ~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 144 LMQAGAITMLTVRLGS 159 (417)
T ss_pred HHHHHHHHHHHHhHHH
Confidence 5666777666555443
No 159
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=95.98 E-value=0.035 Score=64.05 Aligned_cols=107 Identities=10% Similarity=-0.011 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 280 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 280 r~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
....+...++.+..++.+.+...+++|+|+|++......+..+.+....+ .... .+.+..+++
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~-~~~~----------------~s~~~l~~~ 114 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIY-GFHL----------------NSVPLLFAA 114 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHH-HHHH----------------hhHHHHHHH
Confidence 34566677788888889999999999999999754322222111111111 1110 166888899
Q ss_pred HHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 360 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
..+.|+..|.......+++.+..++ ++.+..+|+.++...++++
T Consensus 115 ~~l~gi~~a~~~p~~~a~l~~~~~~--~~~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 115 LFLMGIHSALFGPIKYSILPDHLNK--DELLGANALVEAGTFIAIL 158 (1140)
T ss_pred HHHHHHHHHhhchHHHHhhHhhcCc--cccchhhHHHHHHHHHHHH
Confidence 9999999999999999999998874 5667778888887776654
No 160
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=95.97 E-value=0.016 Score=60.71 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+-...+.+...+.+++..++.+|+|||++..++.++++++.+.+.+.. +. .+..+.+..++.-.+.
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~----~~----------~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSP----GS----------SPKSVMATLCFWRFWL 125 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcc----Cc----------ccchHHHHHHHHHHHH
Confidence 334455666778888889999999999999998888876654433321 00 0000245677788889
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+..+....++++|..+. +..|..+++++.+..+++
T Consensus 126 G~~~g~~~~~~~~~~~e~~p~--~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 126 GVGIGGDYPLSAIITSEFATK--KWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred HHHHhhhhHHHHHHHHHhcCh--hhHHHHHHHHHHHHHHHH
Confidence 999999999999999998774 455777888877766543
No 161
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=95.77 E-value=0.05 Score=57.00 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHH
Q 015467 235 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 314 (406)
Q Consensus 235 ~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~ 314 (406)
..+.|..|+.|-+...+... .=|+=++. +.| +...++.++..+.-+...++.+|+|.|++..
T Consensus 43 f~~~F~~w~~~~~l~~~~~~----~~~~ls~~-------------q~g-~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~ 104 (462)
T PRK15034 43 LLLAFCVWMLFSAVTVNLNK----IGFNFTTD-------------QLF-LLTALPSVSGALLRVPYSFMVPIFGGRRWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhh----hhcCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 45567777777776544321 11322221 222 2234455555666667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeeh
Q 015467 315 ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 394 (406)
Q Consensus 315 ~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mg 394 (406)
++.++.++.++.+.+.. .+. ..+.+..+++-.+.|+. +.........++..-+ +++.|..+|
T Consensus 105 ~~~ll~~i~~~~~~~a~----~~~-----------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp--~~~rG~A~G 166 (462)
T PRK15034 105 FSTAILIIPCVWLGIAV----QNP-----------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFP--KAKQGSALG 166 (462)
T ss_pred HHHHHHHHHHHHHHHHH----ccc-----------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCC--HhHhHHHHH
Confidence 99888877666555431 000 01567778888888887 6666666777777655 356787777
Q ss_pred hh----hhhhhccc
Q 015467 395 VL----NLAIVIPQ 404 (406)
Q Consensus 395 ll----N~~i~lpQ 404 (406)
+. |....+.|
T Consensus 167 i~~g~G~~G~~l~~ 180 (462)
T PRK15034 167 INGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHhhHHHHHH
Confidence 77 66655444
No 162
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=95.68 E-value=0.054 Score=54.33 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+...+..++.+|+|+|++..++.++++++.....+.. +.+..++...+.
T Consensus 42 ~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~l~ 101 (392)
T PRK10473 42 IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE--------------------TSSLFLAGRFLQ 101 (392)
T ss_pred HHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHH
Confidence 345556666667778889999999999999998888876655433321 445555666778
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhh
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 399 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~ 399 (406)
|+..+......++++.+..++ ++.+..+|+.+..
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~ 135 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDD--RRRAKVLSLLNGI 135 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCH--HHHHHHHHHHHHH
Confidence 888888888888898887653 3344445555543
No 163
>PRK15011 sugar efflux transporter B; Provisional
Probab=95.65 E-value=0.067 Score=54.01 Aligned_cols=141 Identities=16% Similarity=0.037 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Q 015467 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (406)
Q Consensus 228 P~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~i 307 (406)
.++-..+.+..|++.++..-+.-+...|+.+ -++-++. ..|.. ...+.+...+.+.+...+.+|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~s~~-------------~~g~~-~~~~~~~~~~~~~~~~~~~dr~ 78 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTD-EVHARPA-------------MVGFF-FTGSAVIGILVSQFLAGRSDKR 78 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCHH-------------HHHHH-HHHHHHHHHHHHHHHHHHHhcc
Confidence 3556667777888888877777666666644 2332221 22221 2234444555555666668899
Q ss_pred CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 308 GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 308 g~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
|+|+.++ .+.++.+++.+...+.. +.+..+++..+.|...+...-.--+++.++.+.++
T Consensus 79 g~r~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (393)
T PRK15011 79 GDRKSLIVFCCLLGVLACTLFAWNR--------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG 138 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc
Confidence 9988754 45555444433222221 33433333334454444333333344444433333
Q ss_pred CCcceeehhhhhhhhcc
Q 015467 387 GGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 387 ~~~G~~mgllN~~i~lp 403 (406)
|..|.+.|+.+....++
T Consensus 139 ~~~~~~~~~~~~~~~lg 155 (393)
T PRK15011 139 REAVMFSSFLRAQVSLA 155 (393)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 44566667766554443
No 164
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.61 E-value=0.024 Score=46.81 Aligned_cols=82 Identities=21% Similarity=0.340 Sum_probs=60.0
Q ss_pred HHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHH
Q 015467 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (406)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ 124 (406)
.+..++....+....+++.|..|+++|.+++++......+|+.+|..+++.. .+. ...+..|.+.
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~-------------~~~~~~~~~~ 123 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVL--AQF-------------LGWRAPFLFL 123 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH--hcc-------------cchHHHHHHH
Confidence 4445666677788889999999999999999999999999999998887641 111 1245667776
Q ss_pred HHHHHHHhhheeeEeec
Q 015467 125 VVFLTLCALVTIYFADE 141 (406)
Q Consensus 125 ai~l~~~~~~Tl~~v~E 141 (406)
.++.+++.+......||
T Consensus 124 ~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 124 AILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHHHHhhcCCC
Confidence 66666666655555555
No 165
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=95.59 E-value=0.037 Score=54.91 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+..++..++.+|+|+|++..++.++.+++.....+.. +.+..++...+.
T Consensus 30 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~l~ 89 (377)
T PRK11102 30 MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--------------------TIDQLIYMRFLH 89 (377)
T ss_pred HHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 334556666777788888999999999999999888877665444332 456667777888
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
|+..+.......+++.+..++ ++.|..+|+.+....+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 126 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPK--EEFSRMMSFVTLVMTI 126 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHH
Confidence 988888777777888887553 4556667777665443
No 166
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=95.47 E-value=0.06 Score=55.15 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=63.6
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
..+.+++..++.+|+|||++..++.++++++.+.+.+.. +|. .++ .......+++=.+.|+.-+....
T Consensus 76 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~-----~~~--~~~~~~l~~~R~l~G~g~g~~~~ 143 (432)
T PRK10406 76 RPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP-----GYE-----TIG--TWAPALLLLARLFQGLSVGGEYG 143 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC-----Cch-----hHH--HHHHHHHHHHHHHHHhhhhhhHh
Confidence 346778889999999999999999999887665544432 000 000 00223455666788999888888
Q ss_pred chhhhhhcccccCCCCcceeehhhhhhh
Q 015467 373 VPFAITAELTADSGGGQGLAIGVLNLAI 400 (406)
Q Consensus 373 iPfaLl~~~~~~~~~~~G~~mgllN~~i 400 (406)
...++++|..++ ++.|..+++.+...
T Consensus 144 ~~~~~i~e~~p~--~~rg~~~~~~~~~~ 169 (432)
T PRK10406 144 TSATYMSEVAVE--GRKGFYASFQYVTL 169 (432)
T ss_pred hHHHHHHHhCCC--CcccHHHHHHHHHH
Confidence 889999998764 44566666655443
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=95.46 E-value=0.043 Score=56.31 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....+.+...+.+.+..++.+|+|+|++..++.++.+++.+...+..... .+.+...+...+.
T Consensus 65 ~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~l~~~~~l~ 128 (438)
T TIGR00712 65 FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWAT----------------SSIAIMFVLLFLN 128 (438)
T ss_pred HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccccc----------------chHHHHHHHHHHH
Confidence 445566667777888889999999999999988888877655433321000 0334444555667
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|+..+.........+.++.+ +++.|..+|+.|+...+..
T Consensus 129 g~~~g~~~~~~~~~i~~~~~--~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWS--QSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred HHHhhcchHHHHHHHHHhcC--cccchhHHHHHHHHHHhHh
Confidence 77777666656667777665 3567888888887765543
No 168
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.41 E-value=1.4 Score=45.34 Aligned_cols=53 Identities=19% Similarity=0.280 Sum_probs=38.9
Q ss_pred HHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 43 g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
+++++-.++-.+|...-.|+.++-|++....=.+....+.++|+++|=++|..
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34445555556666666788899988766666667788899999999888864
No 169
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.34 E-value=0.033 Score=58.53 Aligned_cols=97 Identities=21% Similarity=0.173 Sum_probs=76.8
Q ss_pred HhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchh
Q 015467 273 KFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAI 352 (406)
Q Consensus 273 ~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 352 (406)
+.+.+....-.++..+|-+-..+.+++...+.+++|||.++.+++++++++-+.+++.. +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--------------------~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--------------------N 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--------------------c
Confidence 33443444445666667777778888889999999999999999999987766666554 7
Q ss_pred hHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCc
Q 015467 353 KVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 353 ~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
....+++=.+.|+.-+....+.+.+++|......|+.
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~ 207 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGL 207 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhH
Confidence 7888899999999999999999999999987544443
No 170
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=95.27 E-value=0.035 Score=58.13 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.|....|.+...+...+..++.+|+|+|+++.++.++++++.+...+.. +.+..++.-.+
T Consensus 44 ~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~--------------------~~~~li~~r~l 103 (495)
T PRK14995 44 LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP--------------------TASWLIATRAL 103 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC--------------------CHHHHHHHHHH
Confidence 5666677777777777888999999999999999999887665444332 55666777788
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
.|+..+.....-.+++.+...+ +++.|..+|++.....+
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~-~~~r~~~~g~~~~~~~~ 142 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTE-EKQRNMALGVWAAVGSG 142 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHH
Confidence 8998888777667777554321 23455556666555443
No 171
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.25 E-value=0.027 Score=58.36 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
-..+.++..+.|-+...+.+|+.||++..+|..+.++++++..+.. .-|.++++=++.|+
T Consensus 74 ~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--------------------~Fwq~~l~R~~vGi 133 (493)
T KOG1330|consen 74 QTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--------------------HFWQVLLCRGFVGI 133 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHhcc
Confidence 3467778888888899999999999999999999998888777765 56899999999999
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.-|+...+-=+++++.-++. +.|.-+|++|.++..+
T Consensus 134 GeAs~~~ia~s~IaD~f~~~--~Rs~~~~ify~~ipvG 169 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDD--KRSRVLGIFYFAIPVG 169 (493)
T ss_pred chhhhcccchhHhhhcCcch--hhhHHHHHhhhhcccc
Confidence 99999999999999887653 4566699999988665
No 172
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=95.24 E-value=0.071 Score=52.68 Aligned_cols=97 Identities=15% Similarity=0.105 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+....+.+...+.+++..++.+|+|+|++..++.++.+++.+.. ... +.+..++...+
T Consensus 38 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--------------------~~~~l~~~~~~ 96 (355)
T TIGR00896 38 GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--------------------GTALLFAGTAL 96 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--------------------cHHHHHHHHHH
Confidence 455667777888888999999999999999999887766544322 111 44555666667
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.|+..+.....-.+++.++.+ ++.|..+|+.+....++
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g 134 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP---QRVGLMTGLYSMALMGG 134 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc---chhhHHHHHHHHHHHHH
Confidence 787777766555566666543 34577777777655443
No 173
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.20 E-value=0.13 Score=54.12 Aligned_cols=86 Identities=21% Similarity=0.217 Sum_probs=57.0
Q ss_pred cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcc----cchhHHHHHHHHHHH
Q 015467 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAA----CGNLKAAFLVAVVFL 128 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~----~~q~~~~f~i~ai~l 128 (406)
.-.+..|+|+.|..-.+||.+|.+..+.-..+|.++|-.++.. |..++.+..... -.++-..-++.+++-
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~------f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~ 218 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA------FTPLGEKGFMILPGLIFNMYTAPAWLMAILW 218 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH------HhhhcCCceEEcCcceEEecchHHHHHHHHH
Confidence 5568899999999999999999987776555666666555432 111111111111 135566667788888
Q ss_pred HHHhhheeeEeeccCC
Q 015467 129 TLCALVTIYFADEVPL 144 (406)
Q Consensus 129 ~~~~~~Tl~~v~E~p~ 144 (406)
++..++..++.||.+-
T Consensus 219 i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 219 IIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHhheeeccc
Confidence 8888888899999753
No 174
>PRK15075 citrate-proton symporter; Provisional
Probab=95.16 E-value=0.14 Score=52.45 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHH-HHHHHHHHHHhHHHhhhhcCc
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL-NSVVLGVSSFLIEPMCRWIGS 309 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~-~siv~~v~s~~l~~l~~~ig~ 309 (406)
+-.+++..|+.++-...+-++.+. +.++ |+.++. +++.-..+..... ..+...+.+++...+.+|+||
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~-i~~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr 85 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATA-IAKT-FFPAGN---------EFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGR 85 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHH-hCCCCC---------chHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhch
Confidence 445566666666666666655553 3332 333322 1111111111111 111223456778999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhH--------HHHHHHHHhhhHHHHHhhchhhhhhcc
Q 015467 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKV--------ASLVVFTLLGFPLAITYSVPFAITAEL 381 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~Gi~wA~~~siPfaLl~~~ 381 (406)
|++++.+.++++++.+.+.+.. +.. ..++.-.+.|+..+.....-.+++++.
T Consensus 86 r~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~ 145 (434)
T PRK15075 86 RKGLIVTLSIMASGTLLIAFVP--------------------GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEI 145 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--------------------cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhh
Confidence 9999999998887665544432 211 234445677877766555445678887
Q ss_pred cccCCCCcceeehhhhh
Q 015467 382 TADSGGGQGLAIGVLNL 398 (406)
Q Consensus 382 ~~~~~~~~G~~mgllN~ 398 (406)
.+. ++.|..+|+.+.
T Consensus 146 ~p~--~~rg~~~~~~~~ 160 (434)
T PRK15075 146 ATP--GRKGFYTSWQSA 160 (434)
T ss_pred CCc--ccchHHHHHHHH
Confidence 764 455666666554
No 175
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=95.08 E-value=1.9 Score=44.66 Aligned_cols=70 Identities=9% Similarity=0.091 Sum_probs=43.5
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
=++.-++.|++.+|+|.|+...++-++.++=..+..+.+ +++.+..+=.+=|+-.+...-
T Consensus 272 E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--------------------~~~~i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 272 EALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--------------------NPWVISLIKLLHALEFPLLLV 331 (412)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--------------------chHHHHHHHHHHHHHHHHHHH
Confidence 344556779999999999998877555544433333333 666666666666776666666
Q ss_pred chhhhhhccc
Q 015467 373 VPFAITAELT 382 (406)
Q Consensus 373 iPfaLl~~~~ 382 (406)
..+-.+.+..
T Consensus 332 a~fkYI~~~f 341 (412)
T PF01306_consen 332 AAFKYITAHF 341 (412)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 5555555543
No 176
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=95.05 E-value=0.064 Score=55.62 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH-HHhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF-TLLG 364 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~G 364 (406)
+..+.+...+...+..++.+|+|+|++.+++.++++++.+...+.. +.+..++.. .+.|
T Consensus 60 ~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~l~G 119 (455)
T TIGR00892 60 SSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS--------------------NVIELYLTAGFITG 119 (455)
T ss_pred HHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHHHH
Confidence 3344444555666788999999999999999888876655443332 333333333 4568
Q ss_pred hHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 365 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
+..+......++++.++.+ ++.|..+|+.+....+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~---~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 120 LGLAFNFQPSLTMLGKYFY---RRRPLANGLAMAGSPV 154 (455)
T ss_pred hcchhhhhHHHHHHHHHHH---hhHHHHHHHHHhcccH
Confidence 8777655555677676653 3457777777766554
No 177
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.95 E-value=0.2 Score=51.98 Aligned_cols=83 Identities=16% Similarity=0.262 Sum_probs=51.6
Q ss_pred HHhhhccccchhhHHHHHhcCCCchhhh--hHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHH
Q 015467 45 WLLDLANNTVQGPARALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (406)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~--~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~ 122 (406)
.+..++.=.+...+-|++++....+.+. .-.++.-....+|+++|..+++.. .++ ...|..|.
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l-~~~--------------~~~~~~f~ 158 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPL-LDS--------------FGPQGVFL 158 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhh-hhc--------------CCCeEEeh
Confidence 3345555566777788888888655444 333444456678899988887641 111 12456677
Q ss_pred HHHHHHHHHhhheeeEeecc
Q 015467 123 VAVVFLTLCALVTIYFADEV 142 (406)
Q Consensus 123 i~ai~l~~~~~~Tl~~v~E~ 142 (406)
+++++..+..+.+++..+|+
T Consensus 159 i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 159 ISAALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHHHHHHHHHHHhhhhc
Confidence 77777666666666666664
No 178
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.78 E-value=1.3 Score=46.78 Aligned_cols=46 Identities=13% Similarity=0.098 Sum_probs=30.6
Q ss_pred HHHHHHHhhhHHHHHhhchhhhhhcccc--cCCCCcceeehhhhhhhh
Q 015467 356 SLVVFTLLGFPLAITYSVPFAITAELTA--DSGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 356 ~~~l~~~~Gi~wA~~~siPfaLl~~~~~--~~~~~~G~~mgllN~~i~ 401 (406)
.++++...-+....+.++-|-=++.+|+ +++.--|+||-+||.---
T Consensus 404 Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSN 451 (544)
T PF13000_consen 404 YFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSN 451 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHh
Confidence 3444555566666677777766666653 136778999999997543
No 179
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=94.64 E-value=0.071 Score=53.85 Aligned_cols=96 Identities=13% Similarity=-0.044 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
...+.+...+..+....+.+|+|||++...+.+.+..++.. .... + +.+..++.-.+.|+
T Consensus 32 ~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~-~~~~----------------~---~~~~l~~~R~l~G~ 91 (368)
T TIGR00903 32 AITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGR-LLDP----------------F---NYEWLLACQLLAAL 91 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHHh----------------c---cHHHHHHHHHHHHh
Confidence 34455556667778899999999998866554444332211 1110 0 44566666777788
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.-+. .....+.++++.+ +++.|..+|+.+....++.
T Consensus 92 g~~~-~~~~~~~~~~~~~--~~~r~~a~~~~~~~~~lG~ 127 (368)
T TIGR00903 92 GQPF-LLNAFAPAASQIR--EERRDLVISLLSFAMYLGI 127 (368)
T ss_pred HhHH-HHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHH
Confidence 8774 4556666677766 3567888888887766543
No 180
>PRK10133 L-fucose transporter; Provisional
Probab=94.62 E-value=0.13 Score=53.13 Aligned_cols=99 Identities=7% Similarity=-0.127 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+-+..+.+...+.+.+..++.+|+|+|++..++.++++++.+....... + + +.+..++.-.+.
T Consensus 65 l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-a-------------~---~~~~ll~~r~l~ 127 (438)
T PRK10133 65 LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-I-------------M---NYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-c-------------C---CHHHHHHHHHHH
Confidence 3456677788888999999999999999999999999877653221111 0 1 556667777888
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhh
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~ 401 (406)
|+..+.......+++.+..+++ +.+..+++++.+..
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~--~~~~~~s~~~~~~~ 163 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPES--SGHFRLNLAQTFNS 163 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChh--hHHHHHHHHHHHHH
Confidence 9999888888888887653322 22223555555443
No 181
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.46 E-value=0.93 Score=48.01 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=93.5
Q ss_pred hhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc-cccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 015467 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS-GSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (406)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i-~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~ 134 (406)
-+.-+++.--..+++|..-.++....+++|+++|.++... ...+..-+ -..-|+.|++..++.++..++
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~----------~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG----------LAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC----------cCCceeehhHHHHHHHHHHhe
Confidence 3456677777899999999999999999999999888653 11111000 123689999999899988889
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCch
Q 015467 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (406)
Q Consensus 135 Tl~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (406)
..+..|+.|-... - +.+ .|+... .++.....++..+ ++..+
T Consensus 223 ~f~~lp~~P~~~~---f-------l~~-----------------------~ek~~~----~~~~~~~~~~~~~--~~~~~ 263 (495)
T KOG2533|consen 223 VFFFLPDNPSKAW---F-------LTD-----------------------EEKELV----VERLRESPSGGIE--NKFKW 263 (495)
T ss_pred EEEEecCChhhcc---c-------cch-----------------------HHHHHH----HHHHHhccCCCcc--cccCH
Confidence 9999999864220 0 000 000000 0000000000000 01123
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccce
Q 015467 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (406)
Q Consensus 215 ~~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~ 258 (406)
..+++.++. +-++..++.+|+++.--.++..+.+-|+.+
T Consensus 264 ~~~~~a~~d-----p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~ 302 (495)
T KOG2533|consen 264 KGFKEALKD-----PGVWPFSLCYFFLKLVNYGFSYWLPLYLKS 302 (495)
T ss_pred HHHHHHHhc-----hhHHHHHHHHHHHhhccccHHHHHHHHHHc
Confidence 345555544 678999999999999999998888888776
No 182
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.35 E-value=0.11 Score=53.11 Aligned_cols=109 Identities=15% Similarity=0.186 Sum_probs=82.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhH
Q 015467 275 YDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKV 354 (406)
Q Consensus 275 y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 354 (406)
-+|-+++|.+ ++.++++.++.+-+...+.+|+|.|.-.++|.++.. .+|.+..+- + +..
T Consensus 102 ~~e~~~iG~L-FaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf---~sTilFafg---~--------------sy~ 160 (464)
T KOG3764|consen 102 DRENTQIGLL-FASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMF---LSTILFAFG---N--------------SYP 160 (464)
T ss_pred cccccchhHH-HHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHH---HHHHHHHHc---c--------------hhH
Confidence 3444566665 778889999999999999999999999999977664 344444421 1 556
Q ss_pred HHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 355 ASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 355 ~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
..++.=++.|+..|...+.=.+|+++..+++ .+.|..||+.--++.++-+
T Consensus 161 ~l~vAR~LQgvgsA~~~tsglamlAd~f~~d-~er~~vmGialgfislG~l 210 (464)
T KOG3764|consen 161 MLFVARSLQGVGSAFADTSGLAMLADVFPED-NERGSVMGIALGFISLGVL 210 (464)
T ss_pred HHHHHHHHhhhhHHHHHhhhHHHHHHHcccc-hhhhHHHHHHHHHHhccce
Confidence 7778889999999999999999999877653 3346678887777766543
No 183
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=94.30 E-value=0.15 Score=52.12 Aligned_cols=99 Identities=6% Similarity=-0.158 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+-...+.+...+.+++..++.+|+|+|++..++.++++++.+........ .+.+..++...+.
T Consensus 42 ~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~-----------------~~~~~~l~~~~l~ 104 (410)
T TIGR00885 42 LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI-----------------MNYTLFLVGLFIL 104 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-----------------ccHHHHHHHHHHH
Confidence 44556667788888999999999999999999999988765532222100 1345555566667
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhh
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIV 401 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~ 401 (406)
|+..+.....=-+.+.+..++ ++.+..+++.+.+..
T Consensus 105 G~g~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 140 (410)
T TIGR00885 105 TAGLGFLETAANPYILVMGPE--STATRRLNLAQSFNP 140 (410)
T ss_pred HhhHHHHHhhhhHHHHHHCCH--hHHHHHHHHHHHHHH
Confidence 777776665322233333232 233444555554443
No 184
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=94.23 E-value=0.76 Score=48.82 Aligned_cols=138 Identities=17% Similarity=0.179 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
+.+..+++-..|.-+|++...+|..+|.-. .|..+ ...+.-+.+.+++..+.=++.+.+.++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~---~g~~~-------------~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKS---LGLSS-------------NDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCh-------------hhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 778888888999999999999999988864 22111 11233344455555555577778888766
Q ss_pred chHH--HHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCC
Q 015467 309 SRLV--WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 386 (406)
Q Consensus 309 ~k~~--~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~ 386 (406)
.++. +.++++..+++. .++. ...+.+.....+.++|+..+....++.-++.++...
T Consensus 362 ~~~~~~~~~~ll~~gl~~---~~~p-----------------~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~-- 419 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLAR---LFLP-----------------FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL-- 419 (509)
T ss_pred cchHHHHHHHHHHHHHHH---HHHH-----------------HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh--
Confidence 4444 444444444332 2221 112667889999999999999999999888888653
Q ss_pred CCcceeehhhhhhhhccc
Q 015467 387 GGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 387 ~~~G~~mgllN~~i~lpQ 404 (406)
++..-..|++.++..++.
T Consensus 420 ~~l~~a~Gl~l~~~gi~~ 437 (509)
T KOG2504|consen 420 EKLSNAYGLLLLFQGIGA 437 (509)
T ss_pred hhcchHHHHHHHHhHHHH
Confidence 344445566666555544
No 185
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.14 E-value=0.22 Score=51.02 Aligned_cols=74 Identities=23% Similarity=0.317 Sum_probs=57.4
Q ss_pred ccchhhHHHHHhcCCCch-hhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 015467 52 NTVQGPARALLADLSGPD-QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (406)
Q Consensus 52 n~~q~P~RAli~D~~p~~-qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~ 130 (406)
-......-|+++|..|+| +|+.+.+++--+.++|-++|.-.|++ +.+..+ .++-|++.+++.++
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGi--lYe~~G-------------k~aPFlVL~~v~Ll 238 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGI--LYEFAG-------------KSAPFLVLAIVLLL 238 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccc--hHhhcC-------------CcCcHHHHHHHHHH
Confidence 344556678999999986 57899999999999999999999997 333222 35678888888888
Q ss_pred HhhheeeEee
Q 015467 131 CALVTIYFAD 140 (406)
Q Consensus 131 ~~~~Tl~~v~ 140 (406)
-..+-++.++
T Consensus 239 d~~L~l~vi~ 248 (464)
T KOG3764|consen 239 DGALQLLVIE 248 (464)
T ss_pred HHHHHHheeC
Confidence 8887766655
No 186
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.03 E-value=1.3 Score=46.84 Aligned_cols=68 Identities=15% Similarity=0.232 Sum_probs=52.5
Q ss_pred hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 015467 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (406)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl 136 (406)
++-.++....|+++|++++++...-..+|.+++..++.. .. .+++ ..++.+..|+....++++++++
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql--l~-s~gW----------r~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL--LV-TLGW----------ISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-hcCc----------hhHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999999999888764 11 1221 1467778888877777777766
Q ss_pred e
Q 015467 137 Y 137 (406)
Q Consensus 137 ~ 137 (406)
+
T Consensus 201 ~ 201 (511)
T TIGR00806 201 F 201 (511)
T ss_pred h
Confidence 5
No 187
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=93.99 E-value=0.19 Score=52.88 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=74.5
Q ss_pred HHHHHHHHHHH---HHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 229 PAMHVVLIVMA---LTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 229 ~~~~~l~~v~f---fsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
.++-++|.+.+ |+|.--.++..++++..|. ++ ..-.+.+++..++.++...+...+.+
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~-----~~--------------~~~~~i~~~~~l~~~i~~Pi~G~lSD 64 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQELGI-----PH--------------AWASIIWLCGPLSGLLVQPLVGYLSD 64 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----CH--------------HHHHHHHHHHHHHHHHHHhHeeehhc
Confidence 34566666666 4555555555554433221 21 11123344555666666666677777
Q ss_pred ----hcCchHHHHHH-HHHHHHHHHHHHHHHhhhhcccCCCccccCCCc--chh-h---HHHHHHHHHhhhHHHHHhhch
Q 015467 306 ----WIGSRLVWAIS-NFIVFACMATTAIISVISVREYSGGIEHGIGAN--QAI-K---VASLVVFTLLGFPLAITYSVP 374 (406)
Q Consensus 306 ----~ig~k~~~~~s-~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~-~---~~~~~l~~~~Gi~wA~~~siP 374 (406)
|+|||+.|+++ .+..++++..+.+.. + +...++++ ..+ . +..++...+..++..+.+.--
T Consensus 65 r~~sr~GRRrp~il~g~~~~~~~l~ll~~~~----~-----~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~ 135 (477)
T TIGR01301 65 RCTSRFGRRRPFIAAGAALVAFAVILIGFAA----D-----IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC 135 (477)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHhCc----h-----hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999875 334333333322221 0 00000000 001 1 122222333444555555544
Q ss_pred hhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 375 FAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 375 faLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
-|++++..++++|+.+...+..+.+..+++
T Consensus 136 rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 136 RAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 567788877655666666777666655544
No 188
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=93.99 E-value=0.37 Score=49.39 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc-
Q 015467 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS- 309 (406)
Q Consensus 231 ~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~- 309 (406)
-.++|...|+-|.+|-.+.-+.+.|+.++ ++-++ .+.| +-+..+++...+.+.+..++.+|+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~s~-------------~~iG-l~~a~~~~~~~i~~~~~g~l~dr~g~~ 68 (418)
T TIGR00889 4 TAKLKFMSFLQWFIWGSWLVTLGSYMSKT-LHFSG-------------AEIG-WVYSSTGIAAILMPILVGIIADKWLSA 68 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH-------------HHHH-HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34566666666665555555566666551 22121 1334 33566777888899999999999854
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 015467 310 RLVWAISNFIVFACMATTA 328 (406)
Q Consensus 310 k~~~~~s~~~fai~~~~~~ 328 (406)
|++..+++++.++++....
T Consensus 69 r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 69 QKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7788877777665544333
No 189
>PRK11010 ampG muropeptide transporter; Validated
Probab=93.67 E-value=0.18 Score=52.95 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.6
Q ss_pred HHHHhHHHhhhhc-----CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHH
Q 015467 295 VSSFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (406)
Q Consensus 295 v~s~~l~~l~~~i-----g~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA 368 (406)
+..++..++.+|+ |||+.|+ ++++..++++..+.+.. | ..+.+...+...+.|+..+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~----------------~-~~~l~~l~~~~~l~~~~~a 122 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE----------------P-GTQLRWLAALAVVIAFCSA 122 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC----------------C-cchHHHHHHHHHHHHHHHH
Confidence 4566777888888 9999877 56666666555444432 1 1144556666777788877
Q ss_pred HHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 369 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 369 ~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
.....--+++.+..+. ++.|...|+......+
T Consensus 123 ~~~i~~~a~~~~~~~~--~~rg~~~~i~~~g~~l 154 (491)
T PRK11010 123 SQDIVFDAWKTDVLPA--EERGAGAAISVLGYRL 154 (491)
T ss_pred HHHHHHHHHHHHhcCh--hhhHHHHHHHHHHHHH
Confidence 5555555777777663 3455556666654443
No 190
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.62 E-value=2.8 Score=43.34 Aligned_cols=72 Identities=8% Similarity=0.089 Sum_probs=48.8
Q ss_pred cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 015467 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~ 132 (406)
+.....-+||--.+|+++-+++-++.....-+|..+|+++|=+ +-. +- ..+++.++.++.....+++
T Consensus 109 a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQl--lvs---~~--------~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 109 AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQL--LVS---FG--------GVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH---hc--------CCCHHHHHHHHHHHHHHHH
Confidence 3455677889999999877787777766666777777777743 111 11 1357778788877777777
Q ss_pred hheee
Q 015467 133 LVTIY 137 (406)
Q Consensus 133 ~~Tl~ 137 (406)
+++++
T Consensus 176 ~~~~f 180 (412)
T PF01770_consen 176 LIALF 180 (412)
T ss_pred HHHHH
Confidence 76655
No 191
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=93.61 E-value=1.5 Score=44.99 Aligned_cols=122 Identities=13% Similarity=0.092 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|++....++.++-.++.-.+..|.+.|.-+ -+|.+. . ..|. .+.+..+.=.+.-+..+++.||+|
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~--~gg~~~-----------~-~~g~-~~~l~~~aEi~~f~~~~~~~~r~g 271 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQE--LGGYSG-----------S-TIGI-LWALGVVAEIPFFFFSGRFLKRFG 271 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cccchh-----------h-HHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 455566777788888888888888877655 111111 0 1121 122222222344467799999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH----HHHhhhHHHHHhhchhhhhhccccc
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV----FTLLGFPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~Gi~wA~~~siPfaLl~~~~~~ 384 (406)
.|++..++.+..++=.....+.. + +.+....+ ..+-|+.++.........+.+..++
T Consensus 272 ~~~ll~~a~~~~~vR~~l~a~~~----------------~---~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~ 332 (400)
T PF03825_consen 272 IKWLLLLALVAYAVRWLLYAYFS----------------D---PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP 332 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------------C---CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc
Confidence 99999988777654443333321 0 22222211 2467999999998888888887764
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=93.55 E-value=0.11 Score=53.49 Aligned_cols=99 Identities=6% Similarity=-0.054 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
+..+.+...+..++..++.+|+|+|++..++.++.+++.+.+.+... .+.+..++.-.+.|+
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG------------------GGIALVVFCRVIQGL 143 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH------------------cCchHHHHHHHHHHH
Confidence 44566677778888899999999999999888877655443332210 023455666778899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
..+.....-.+++++..+ +++.|..+|+.+....+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~ 180 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAP--PKERSRLLGMSTSGFQLGT 180 (465)
T ss_pred hcccchhhHHHHHHhcCC--HHHHHHHHHHHHHHHHHHH
Confidence 999888887888888776 3566788888887666554
No 193
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.53 E-value=0.23 Score=48.95 Aligned_cols=140 Identities=19% Similarity=0.290 Sum_probs=83.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 226 ~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
+--+++|.+.++.++=.++||||..-...|..+ -|+-.|. ..|..--.+|- ++++.|-+...+.+
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~-rfGlS~~-------------~a~~i~s~vy~-Isav~spvfg~i~D 325 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQK-RFGLSAV-------------SAGNILSTVYG-ISAVLSPVFGAISD 325 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhCCChh-------------hccchhhhhhh-hhhhhhhhHHHhHh
Confidence 344678888888888999999997654444433 3333332 11223233444 35556666678889
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccC
Q 015467 306 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 385 (406)
Q Consensus 306 ~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~ 385 (406)
+.|++..|..+-.+..+.-=+..+.+.. ++|...++.++-+-..|+.+|= +++..++++
T Consensus 326 k~G~n~~wv~~a~~~tl~~H~~l~Ft~l------------------sPy~~m~~lGLsysllAcslWP---~va~~vpE~ 384 (459)
T KOG4686|consen 326 KYGFNLWWVASACILTLLGHSGLFFTFL------------------SPYTSMTFLGLSYSLLACSLWP---CVASLVPEE 384 (459)
T ss_pred hhcceehhHHHHHHHHHHHhhhHHhhhc------------------cHHHHHHHHhhhHHHHHHHHhh---hhhhhCCHH
Confidence 9999999987755544332234444432 5677777766666666666663 444333321
Q ss_pred --CCCcceeehhhhhhhh
Q 015467 386 --GGGQGLAIGVLNLAIV 401 (406)
Q Consensus 386 --~~~~G~~mgllN~~i~ 401 (406)
+...|....+.|....
T Consensus 385 qLGTaygf~qsIqNLgla 402 (459)
T KOG4686|consen 385 QLGTAYGFIQSIQNLGLA 402 (459)
T ss_pred HhcchHHHHHHHHhhhhh
Confidence 3455666667776544
No 194
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.06 E-value=1.2 Score=46.36 Aligned_cols=76 Identities=18% Similarity=0.120 Sum_probs=45.8
Q ss_pred CCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCC
Q 015467 66 SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLT 145 (406)
Q Consensus 66 ~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~ 145 (406)
.|++||..|++....-+-+|..+|++++-++ .|-..+. .........+|+....+-++-+..+++..+|+|..
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppil-----V~~~~~~--~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPIL-----VPSSKDS--EDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhcccee-----cCCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 5789999999998887779999999998762 1111000 00111233344444444444446666777887765
Q ss_pred CCC
Q 015467 146 VNQ 148 (406)
Q Consensus 146 ~~~ 148 (406)
|+.
T Consensus 242 Pps 244 (480)
T KOG2563|consen 242 PPS 244 (480)
T ss_pred CCc
Confidence 544
No 195
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=92.98 E-value=0.81 Score=48.79 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
|.+|++++.|+++-+|-.-+.+=..-+|-+ . .++| ..+|.. .....+-.++.+++...+++|++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-l-t~S~-------------~~valv-~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQ-L-TGSP-------------LMVALV-QAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hCCH-------------HHHHHH-HHHHHHHHHHHHHHHHHHhhccc
Confidence 578888888888877766555544433332 1 1111 122222 22333445677778889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccccc
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 384 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~ 384 (406)
+|++.+.++++.+++.+...+.... + .-+++.++++..+.|+..+...-.=.+++.+..++
T Consensus 74 rrrili~~~~~~~~~~~~L~~l~~~--~-------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~ 134 (524)
T PF05977_consen 74 RRRILILSQLLRALVALLLAVLAFF--G-------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK 134 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh--C-------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 9999999999876654443333321 0 11678888899999999988888878888887663
No 196
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=92.70 E-value=0.29 Score=51.62 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
+|-...+++.+++.+++..++.+++|||+.+.++.+++.++-+...+.. ++...++-=.+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------------------~~~~l~~GR~l 151 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------------------SWYQLIVGRIL 151 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHH
Confidence 3445566778888999999999999999999999999987665444433 66777777778
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
.|+..+..+-+---.++|..+ .+--|...++..+++.++++
T Consensus 152 ~G~g~G~~~~~~piy~sEiap--~~~RG~l~~~~~l~~~~Gi~ 192 (513)
T KOG0254|consen 152 TGLGVGGASVLAPVYISEIAP--AHIRGTLVSLYQLFITIGIL 192 (513)
T ss_pred hccchhhhhhcchhhHhhcCC--hhhhHHHHHHHHHHHHHHHH
Confidence 888888877444444455443 34567777777777766543
No 197
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=92.51 E-value=2.9 Score=43.28 Aligned_cols=253 Identities=15% Similarity=0.191 Sum_probs=137.6
Q ss_pred hhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 015467 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (406)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~T 135 (406)
.||-..+.--.|.++|.+..++=+.--++|+.+.-.+-. | ++... -..-|..|++.+++-++--++.
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~---l----a~~~~------~~~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL---L----AFFAF------HGGWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH---H----HHHHh------ccchhHHHHHHHHHHHHHHHHH
Confidence 588889999999999988777766666777666544331 0 00000 0145788888777777777777
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCccccchhhhccccccccCCCCCCCchh
Q 015467 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (406)
Q Consensus 136 l~~v~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
+...|++|-.. - +++ ..+-++|+. +.+ ++ ++.++ ..
T Consensus 203 ~~~~rd~Pqs~---G--------LP~-----ie~~~~d~~-----------------------e~~-~~--~~~~~--~l 238 (448)
T COG2271 203 LFLLRDRPQSE---G--------LPP-----IEEYRGDPL-----------------------EIY-EE--EKENE--GL 238 (448)
T ss_pred HHHhCCCcccc---C--------CCC-----HHHhhcCch-----------------------hhh-hh--hccCC--Cc
Confidence 77888875211 0 000 000011100 000 01 10001 13
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHH
Q 015467 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 295 (406)
Q Consensus 216 ~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v 295 (406)
+.++++..-.=--|.+|.+|++++|-.+.=+...--...|..| +-|-+.. -..++..+|=+..+.
T Consensus 239 s~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e-~k~~s~~--------------~a~~a~~lfE~agl~ 303 (448)
T COG2271 239 TAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE-VKGFSLV--------------KANWAISLFEVAGLP 303 (448)
T ss_pred cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCHH--------------HHHHHHHHHHHHhhH
Confidence 4566665555556999999999999999888887777777776 3332221 123455555555555
Q ss_pred HHHhHHHhhhhc--CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 296 SSFLIEPMCRWI--GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 296 ~s~~l~~l~~~i--g~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
-+++...+.+|+ |+|..-. +..+...+|+ +.++. .|+ ++.+...++...+|+ +.-
T Consensus 304 G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~-----~~~w~------------~~~-~~~~l~~~~l~~iGf----~Iy 361 (448)
T COG2271 304 GTLLAGWLSDKLFKGRRGPMALIFMLLITASL-----VLYWL------------APN-GSYLLDAILLFIIGF----LIY 361 (448)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHH-----HHHHc------------CCC-ccHHHHHHHHHHHHH----HHh
Confidence 566666666654 5554432 2222222221 11110 121 244555666666665 344
Q ss_pred chhhhhhccccc--CCCCcceeehhhhhhhhc
Q 015467 373 VPFAITAELTAD--SGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 373 iPfaLl~~~~~~--~~~~~G~~mgllN~~i~l 402 (406)
-|=.|++....| ++.-.|+.-|..+.+-++
T Consensus 362 GPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 362 GPQMLIGLAAAEFVPKKAAGTATGFVGLFAYL 393 (448)
T ss_pred hHHHHHHHHHhccccHhhccchhchhhhHHHH
Confidence 566566543211 134578888888777665
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=92.50 E-value=0.36 Score=47.61 Aligned_cols=88 Identities=15% Similarity=0.169 Sum_probs=48.4
Q ss_pred HHhHHHhhhhc-----CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHH
Q 015467 297 SFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 370 (406)
Q Consensus 297 s~~l~~l~~~i-----g~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~ 370 (406)
.++..++.+|+ |||+.|+ .++++.++++....+.. +..+.+....+..+.|+..+..
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-----------------~~~~l~~l~~~~~~~~~~~~~~ 100 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-----------------PSTDLPLLAGLAFLIAFFSATQ 100 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-----------------cchhHHHHHHHHHHHHHHHHHH
Confidence 44555666664 8999875 57777776654443321 0113444444444555555544
Q ss_pred hhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 371 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 371 ~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.-.--+++.+..++ ++.|...|+...+..++
T Consensus 101 ~~~~~a~~~~~~~~--~~r~~~~~~~~~~~~~G 131 (356)
T TIGR00901 101 DIALDAWRLEILSD--EELGYGSTIYIVGYRAG 131 (356)
T ss_pred HHHHHHHHHHhCCH--hhhchHHHHHHHHHHHH
Confidence 44445667777654 34455566666555444
No 199
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.49 E-value=1.3 Score=48.96 Aligned_cols=102 Identities=19% Similarity=0.285 Sum_probs=75.2
Q ss_pred chhhhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc-----cccccccccccchh
Q 015467 35 RAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS-----GSWHRWFPFLTSRA 109 (406)
Q Consensus 35 ~~I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i-----~d~~~~~~~~~~~~ 109 (406)
...++.++|-.++=.+.-..+..--+||-|.+.+++-..-.++...+.-+|=++||++|++ .|+.. -+...+
T Consensus 235 ~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~-~~~~it-- 311 (735)
T KOG3626|consen 235 YPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGL-SPIGIT-- 311 (735)
T ss_pred hhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeecccc-CCCCCC--
Confidence 3566778888888889889999999999999999999999999999999999999999986 24410 010011
Q ss_pred hhcccchhHH------HHHHHHHHHHHHhhheeeEeeccC
Q 015467 110 CCAACGNLKA------AFLVAVVFLTLCALVTIYFADEVP 143 (406)
Q Consensus 110 ~~~~~~q~~~------~f~i~ai~l~~~~~~Tl~~v~E~p 143 (406)
+.+-|+ =|++..++.+++.+.-.++=||.|
T Consensus 312 ----~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 312 ----PTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred ----CCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 122233 477777777777777666666655
No 200
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=92.40 E-value=1 Score=46.17 Aligned_cols=81 Identities=11% Similarity=0.201 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhc-Cch
Q 015467 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSR 310 (406)
Q Consensus 232 ~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~i-g~k 310 (406)
.||+..+|+-|..|-.+.-|.+.|..+.=| + +.++|.. +.+-.+...+...+...+++|. .+|
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~--s-------------~~qIG~l-~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGF--S-------------GTQIGIL-LAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--C-------------HHHHHHH-HHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 356666665555555555556666654111 1 2255554 4455566677777778888886 468
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 015467 311 LVWAISNFIVFACMATTA 328 (406)
Q Consensus 311 ~~~~~s~~~fai~~~~~~ 328 (406)
++..+.+++.++.+....
T Consensus 69 ~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 69 RILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888887776655443
No 201
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=92.21 E-value=0.55 Score=48.19 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
+....|+.+.++.+.++..+.+|+.||++......+|.++=...++. | |.+..++.=.+.
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA-----------------p---~f~~Ll~aR~~~ 111 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA-----------------P---SFAVLLLARALA 111 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh-----------------c---cHHHHHHHHHHH
Confidence 44667899999999999999999999999998888887655433332 2 556667777788
Q ss_pred hhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 364 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
|++-+....+-.++.++..++ ++.|-.+|+.+....++.
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp--~~~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPP--GKRGRALALVFTGLTLAT 150 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCc--cchhhHHHHHHHHHHHHH
Confidence 999999999999999988874 566666888777665543
No 202
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.11 E-value=0.041 Score=58.73 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=2.8
Q ss_pred ccchhhhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 33 RTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 33 ~~~~I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
......+.++|-.+.=++...++.=--+||-|.+++++-..-.++...+..+|-.+||++|+.
T Consensus 137 ~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 137 LSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp ---------------SSS---------------------------------------------
T ss_pred chHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 345578888899999999999999999999999999999999999999999999999999985
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=91.14 E-value=0.64 Score=46.97 Aligned_cols=108 Identities=18% Similarity=0.112 Sum_probs=62.1
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhc-----CchH-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCc
Q 015467 276 DQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-----GSRL-VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 349 (406)
Q Consensus 276 ~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~i-----g~k~-~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~ 349 (406)
++|+.....|++.-...-.+..++..++++|+ |+|+ ...+++++.++++..+.+.. +
T Consensus 28 ~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~-----------------~ 90 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP-----------------P 90 (402)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC-----------------c
Confidence 66776666665522222245556777888998 7776 45556777777666544431 0
Q ss_pred chhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 350 QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 350 ~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
..+.+..+.+..+.|+..+...-.-=+++.++.++ ++.|.+.++......+
T Consensus 91 ~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~r~~~~~~~~~g~~~ 141 (402)
T PRK11902 91 HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP--EERGAGAAVKVLGYRL 141 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--hhhhHHHHHHHHHHHH
Confidence 11445555555566766666555555677777653 3455556665544433
No 204
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=90.53 E-value=4 Score=41.98 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=33.4
Q ss_pred hhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcc
Q 015467 38 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFS 91 (406)
Q Consensus 38 ~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~ 91 (406)
.+....+.+|+|-+-+-....-+.-.-++.+++-+-|+..++.=..+|-.+|+.
T Consensus 134 ~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 134 VALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 344455566666555555555566677888888888877776544444444443
No 205
>PTZ00207 hypothetical protein; Provisional
Probab=90.13 E-value=1.6 Score=47.31 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=64.2
Q ss_pred HHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchh
Q 015467 296 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPF 375 (406)
Q Consensus 296 ~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPf 375 (406)
..++...+.+|+|+|++++++.++++++.+.+.+.. + . .+.+ +.+...+...+.|+.-+..+....
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~----~---~----~i~~---s~~~l~l~r~l~G~G~~~~~~~~~ 142 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTF----Q---E----VIEG---SVVRLSVYNGLMTLGCMLFDLGAV 142 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh----c---c----cccC---cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344568889999999999999999998877666531 0 0 0001 567777777788888777777767
Q ss_pred hhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 376 AITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 376 aLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
..+.+.-+ ++.|..+|+.+.+.-++
T Consensus 143 ~~i~~~Fp---~~RG~a~Gi~~~~~gLG 167 (591)
T PTZ00207 143 VTVLSVFP---SNRGAVVAIMKTFTGLG 167 (591)
T ss_pred HHHHHhCh---hhhHHHHHHHHHHHHHH
Confidence 77776654 34488888888876554
No 206
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.21 E-value=7.3 Score=41.04 Aligned_cols=47 Identities=15% Similarity=0.093 Sum_probs=36.7
Q ss_pred Hhhhccccchh-hHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccc
Q 015467 46 LLDLANNTVQG-PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSA 92 (406)
Q Consensus 46 llD~s~n~~q~-P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~ 92 (406)
....=.+.+-. -+=+++-|++..+|-.+=+...+...++|.++|-.+
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555554 677889999999999999999999999988887544
No 207
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=87.23 E-value=0.54 Score=49.11 Aligned_cols=46 Identities=22% Similarity=0.145 Sum_probs=40.3
Q ss_pred ccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
.......|.-+++.+.||++++.+++++.+.+.++|+.+|..+|++
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL 409 (468)
T ss_pred HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334566778999999999999999999999999999999998876
No 208
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=86.90 E-value=1.4 Score=46.57 Aligned_cols=89 Identities=6% Similarity=-0.064 Sum_probs=68.9
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHh
Q 015467 292 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 371 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~ 371 (406)
.-++.-++...+.+|+|.|+++.++.+..+++.+.+.+.. +.....++=.+.|+.-|...
T Consensus 74 sYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--------------------Sl~~L~i~R~llGvaEA~~~ 133 (511)
T TIGR00806 74 SHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--------------------SVWHMQLMEVFYSVTMAARI 133 (511)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHH
Confidence 3444555667888999999999999999888877777765 56778888899999999988
Q ss_pred hchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 372 SVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 372 siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
.=+..+....+ +++.|...|+.|.+..++
T Consensus 134 -A~~syI~~WfP--~kER~ratsi~~sg~~vG 162 (511)
T TIGR00806 134 -AYSSYIFSLVP--PSRYQRAAAYSRAAVLLG 162 (511)
T ss_pred -HHHHHHHHHCC--HHHHHHHHHHHHHHHHHH
Confidence 77777777766 355667778888776654
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.83 E-value=1.9 Score=43.83 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=67.5
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhh
Q 015467 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 372 (406)
Q Consensus 293 ~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~s 372 (406)
..+.+++.|++.||+|..+...+++++.+++-. +... ...+..+.-..+.|..-|+.|.
T Consensus 60 fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~----iR~~-----------------~~~~~L~~gt~l~G~gIav~nV 118 (395)
T COG2807 60 FGLFAPAAPRLARRFGEERSLFLALLLIAAGIL----IRSL-----------------GGLPLLFLGTLLAGAGIAVINV 118 (395)
T ss_pred HHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH----HHhc-----------------ccHHHHHHHHHHHHhhHHHHHH
Confidence 345778889999999999999988887664322 3311 1456778888889999999998
Q ss_pred chhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 373 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 373 iPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
+==+++-++- +|+.|..||++...+++.+
T Consensus 119 LLPslIK~~F---pk~~~~mtglYs~sl~~~a 147 (395)
T COG2807 119 LLPSLIKRDF---PKRVGLMTGLYSTSLGAGA 147 (395)
T ss_pred hhhHHHHhhc---ccchhhHHhHHHHHHHHHH
Confidence 8778877765 5789999999998887643
No 210
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=86.12 E-value=4.7 Score=40.33 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCch----HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSR----LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k----~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
..+.+...+...+..++.+|+|++ ++..++.+++++.+. .+.. +.+..++...+
T Consensus 46 s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~--~~~~--------------------~~~~l~~~~~l 103 (382)
T TIGR00902 46 GAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS--AGAH--------------------NAWLLFIAIGL 103 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH--Hhhh--------------------hHHHHHHHHHH
Confidence 355666667777777888888763 333333222221100 0111 45666666666
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
.|..++....+..++..++. ++.|..+|..+....+
T Consensus 104 ~~~~~~~~~p~~~al~~~~~----~~~~~~~g~~~~~~sl 139 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTWQ----KQFGLDYGKVRLIGSA 139 (382)
T ss_pred HHHHHccchhHHHHHHHHHH----HHcCCCccHHHHHHHH
Confidence 78777776666666655442 3345566666655443
No 211
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=85.61 E-value=5.8 Score=43.04 Aligned_cols=83 Identities=13% Similarity=0.102 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
-..+.+.+++...+..++.+.+|||.+.++++++..++++...-.. +......-.++.|+
T Consensus 84 ~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--------------------~~~~~iag~~l~Gv 143 (599)
T PF06609_consen 84 STAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--------------------NMNTFIAGMVLYGV 143 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--------------------cHHHHHHHHHHHHH
Confidence 3345566666777889999999999999999998877665333221 44555666777788
Q ss_pred HHHHHhhchhhhhhcccccCCCCc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQ 389 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~ 389 (406)
..+...... ..++|..+...|..
T Consensus 144 gaG~~~~~~-~~isEl~p~k~R~~ 166 (599)
T PF06609_consen 144 GAGVQELAA-LAISELVPNKWRGL 166 (599)
T ss_pred hhHHHHHHH-HHHHHhcccchhhh
Confidence 766666554 34688776433433
No 212
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=85.11 E-value=4.6 Score=41.85 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 280 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 280 r~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
++|-.+. .+++.-.+.=+++..+.+|.+.|....+++++-+++++.+.+.. +.....++
T Consensus 65 ~lG~i~s-~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--------------------s~~~~~~l 123 (448)
T COG2271 65 QLGILGS-AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--------------------SLFLFAVL 123 (448)
T ss_pred HHHHHHH-HHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--------------------HHHHHHHH
Confidence 3444432 33444555568889999999999999999999998877655543 55666778
Q ss_pred HHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhc
Q 015467 360 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~l 402 (406)
..+-|+..+.--.--+.++++.-+ +++-|...|++|++--+
T Consensus 124 ~~lng~fQg~Gwpp~~~~i~~Wfs--r~eRG~~~siWn~shNi 164 (448)
T COG2271 124 WVLNGWFQGMGWPPCARTITHWFS--RKERGTWWSIWNTSHNI 164 (448)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHcC--ccccCceEEEehhhhhc
Confidence 888888777666666677777765 45678899999987544
No 213
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=83.76 E-value=0.11 Score=53.04 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi 365 (406)
.....+.+.+.+++.+.+.+|+|||+++.++.++..++.+...+.. ...+.+...+.-.+.|+
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~-----------------~~~~~~~~~~~R~~~G~ 114 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAP-----------------SYNNFWMLLIGRFLIGF 114 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccc-----------------ccccccccccccccccc
Confidence 3344556677788889999999999999998887765443222221 00144566667788899
Q ss_pred HHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 366 ~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
.-+.....=..++.|..++ +..|...++.+++..++++
T Consensus 115 ~~g~~~~~~~~~~~E~~~~--~~R~~~~~~~~~~~~~G~~ 152 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPP--KHRGFLSSLFQLFWALGIL 152 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccc
Confidence 9888888888888888764 3347777777777666554
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=83.41 E-value=8.7 Score=39.58 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=24.3
Q ss_pred HHhHHHhhhhcCchHHHHHHHHHHHHHHHH
Q 015467 297 SFLIEPMCRWIGSRLVWAISNFIVFACMAT 326 (406)
Q Consensus 297 s~~l~~l~~~ig~k~~~~~s~~~fai~~~~ 326 (406)
.++-..+++|+|||.+...++++|+++++.
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~iflfl 427 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIFLFL 427 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 344556778899999999999999987763
No 215
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=81.80 E-value=7.5 Score=38.83 Aligned_cols=75 Identities=13% Similarity=0.015 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCch----HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHH
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSR----LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 361 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k----~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (406)
+..+++...+.+.+..++.+|+|+| +...++..+.+ ....... .+.+..+++..
T Consensus 45 ~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~~~~~-------------------~~~~~l~i~~~ 102 (382)
T PRK11128 45 LGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA---VAFWFGA-------------------HSFWLLFVAIG 102 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH---HHHHHhc-------------------ccHHHHHHHHH
Confidence 5556666777777778888888873 33222211111 1111111 15566666666
Q ss_pred HhhhHHHHHhhchhhhhhccc
Q 015467 362 LLGFPLAITYSVPFAITAELT 382 (406)
Q Consensus 362 ~~Gi~wA~~~siPfaLl~~~~ 382 (406)
+.|+..+.......+++.+..
T Consensus 103 l~g~~~~~~~~~~~a~~~~~~ 123 (382)
T PRK11128 103 LFNLFFSPLVPLTDALANTWQ 123 (382)
T ss_pred HHHHHHcccccHHHHHHHHHH
Confidence 677776665555556666553
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=80.66 E-value=11 Score=39.79 Aligned_cols=88 Identities=9% Similarity=0.059 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 284 ~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
.-..++.+-.++.+++.+.+++++|||....++.++..++...+.+.... ......++-=.+.
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~-----------------~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA-----------------PSFEMLILGRLIV 126 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHH
Confidence 33556677778888999999999999999988888766555444443321 0334455555677
Q ss_pred hhHHHHHhhchhhhhhcccccCCCC
Q 015467 364 GFPLAITYSVPFAITAELTADSGGG 388 (406)
Q Consensus 364 Gi~wA~~~siPfaLl~~~~~~~~~~ 388 (406)
|+.-+....+==-.+.|..|++-||
T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG 151 (485)
T KOG0569|consen 127 GLACGLSTGLVPMYLTEISPKNLRG 151 (485)
T ss_pred HHHhHHHHHHHHHHHhhcChhhhcc
Confidence 7777776665555556666654444
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=80.16 E-value=6 Score=42.34 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=58.9
Q ss_pred cccchhhHHHHHhcCCCchhhhhHHHHH-HHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 015467 51 NNTVQGPARALLADLSGPDQRNSANAIF-CSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (406)
Q Consensus 51 ~n~~q~P~RAli~D~~p~~qq~~a~a~~-s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~ 129 (406)
.-.+...+-+|+.|+.||+-++.+.++. ..+-|+|--+|.++|+.. .+.++ + ++-+|...+.+.+.++
T Consensus 473 ~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~--v~~fg---~------~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 473 HALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV--VERFG---A------RTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh--heeeh---h------HHHHHHHHHHHHHHHH
Confidence 3346667789999999999888888765 467899999999999862 22222 1 2346666666777777
Q ss_pred HHhhheeeEeeccC
Q 015467 130 LCALVTIYFADEVP 143 (406)
Q Consensus 130 ~~~~~Tl~~v~E~p 143 (406)
.-..+..+..||.-
T Consensus 542 ~~~~iq~~l~~~~~ 555 (618)
T KOG3762|consen 542 LFISIQLLLKRRGF 555 (618)
T ss_pred HHHHhhhhhccccc
Confidence 77778888777753
No 218
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=78.12 E-value=9.3 Score=39.47 Aligned_cols=123 Identities=18% Similarity=0.164 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHH
Q 015467 235 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 314 (406)
Q Consensus 235 ~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~ 314 (406)
..+.|..|+-|-+...+..+ .|+=.+. +.+.+ -.+-.++.++.=+++..+.+|+|.|++++
T Consensus 23 f~v~F~VW~l~s~l~~~i~~-----~~~LS~~-------------q~~ll-~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKS-----DFGLSEG-------------QKGLL-VAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred HHHHHHHHHHHHHHHhhhcc-----ccCCCHH-------------HHHHH-HHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 35678889999998877761 2432221 22222 22233444445567778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeeh
Q 015467 315 ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 394 (406)
Q Consensus 315 ~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mg 394 (406)
+++++..+-.+.+.+.. .. | +.+..+++-.++|+.=|+. ++--+.++.+-+ ++++|+.+|
T Consensus 84 ~s~~l~~IP~~~~~~a~----~~----------~---~~~~ll~~gll~G~~GasF-av~m~~~s~~fP--~~~qG~AlG 143 (417)
T COG2223 84 LSMLLLLIPCLGLAFAV----TY----------P---STWQLLVIGLLLGLAGASF-AVGMPNASFFFP--KEKQGLALG 143 (417)
T ss_pred HHHHHHHHHHHHHHHHc----cC----------C---chHHHHHHHHHHhccccee-hcccccccccCC--hhhhhHHHH
Confidence 99998877666555543 10 1 3356666666777765543 222334566655 578888888
Q ss_pred hh
Q 015467 395 VL 396 (406)
Q Consensus 395 ll 396 (406)
+.
T Consensus 144 I~ 145 (417)
T COG2223 144 IA 145 (417)
T ss_pred Hh
Confidence 75
No 219
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=77.70 E-value=9.7 Score=39.23 Aligned_cols=124 Identities=21% Similarity=0.168 Sum_probs=74.7
Q ss_pred hhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHH
Q 015467 245 WFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM 324 (406)
Q Consensus 245 ~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~ 324 (406)
.++++++.-++.-+ -+++|+.+ ...|. .=.|| .|++..+++|.....+.+|+|||.+..++.+..++.+
T Consensus 44 L~~~~~~~V~~F~~--a~~~~~~~---~~~ya--GflGS----sF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ 112 (451)
T KOG2615|consen 44 LYPFVVFMVRDFNI--AIGEPDGA---SVFYA--GFLGS----SFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSY 112 (451)
T ss_pred hhHHHHHhhHHHHH--hhCCcccc---cchhh--hhHhh----HHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHH
Confidence 46677666666654 34555421 11221 12344 5778888899999999999999999988876655433
Q ss_pred HHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH-HHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcc
Q 015467 325 ATTAIISVISVREYSGGIEHGIGANQAIKVASLVV-FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP 403 (406)
Q Consensus 325 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lp 403 (406)
. .+.. + +.-+++++ =.+.|+.= -..++-=|++++..++ +..+.-|++.+++..++
T Consensus 113 l--l~~~----S---------------~~F~afv~aR~l~Gi~k-gnl~v~rAiisdV~se--k~r~l~ms~v~~a~~lG 168 (451)
T KOG2615|consen 113 L--LWAL----S---------------RNFAAFVLARFLGGIFK-GNLSVIRAIISDVVSE--KYRPLGMSLVGTAFGLG 168 (451)
T ss_pred H--HHHH----H---------------HHHHHHHHHHHhhhhcc-CchHHHHHHHHhhcCh--hhccceeeeeehhhhcc
Confidence 2 2211 1 11244444 23444443 3445666788887764 45566688888876654
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=77.40 E-value=4.8 Score=40.26 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=26.7
Q ss_pred HHHHHH-HHHHHHHHHHHHHhHHH-hhhhcCchHHHHHHH-HHHHHHH
Q 015467 280 REGAFG-LLLNSVVLGVSSFLIEP-MCRWIGSRLVWAISN-FIVFACM 324 (406)
Q Consensus 280 r~Gs~g-L~~~siv~~v~s~~l~~-l~~~ig~k~~~~~s~-~~fai~~ 324 (406)
.+|-++ +.+..+...+.+-+.++ ..+|.|+|+.|++.. ++.++++
T Consensus 37 ~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 37 ALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 445543 23445566667766655 467789999996554 3444333
No 221
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=77.10 E-value=41 Score=35.65 Aligned_cols=65 Identities=18% Similarity=0.163 Sum_probs=46.5
Q ss_pred hhHHHHHhcCCCch--hhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 015467 56 GPARALLADLSGPD--QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (406)
Q Consensus 56 ~P~RAli~D~~p~~--qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~ 133 (406)
...-+++.|..|++ +|..++++......+|+.++..+++. +.+. ...+..|.++++.++++++
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~--L~~~-------------~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY--AQEE-------------YSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH--HHhh-------------hChHHHHHHHHHHHHHHHH
Confidence 33568999999875 67889999999899999998777653 1111 1257788887776666665
Q ss_pred he
Q 015467 134 VT 135 (406)
Q Consensus 134 ~T 135 (406)
+-
T Consensus 184 ~~ 185 (493)
T PRK15462 184 IF 185 (493)
T ss_pred HH
Confidence 53
No 222
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=76.56 E-value=2.9 Score=42.30 Aligned_cols=83 Identities=12% Similarity=0.198 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhHHHhhhh----cCchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRW----IGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~----ig~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
.+.+..+..++...+...+.+| +|||+-|+ ++.++++++++..++.. +. +.....+..++.
T Consensus 40 i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~----~~----------~~~~~~~~~~~~ 105 (437)
T TIGR00792 40 LFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP----DF----------SATGKLVYAYIT 105 (437)
T ss_pred HHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC----CC----------CcchHHHHHHHH
Confidence 3555556666666666666665 67766655 46666665544332211 00 000012334445
Q ss_pred HHHhhhHHHHHhhchhhhh-hccc
Q 015467 360 FTLLGFPLAITYSVPFAIT-AELT 382 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl-~~~~ 382 (406)
..+.|+.++. ..+||.-+ ++..
T Consensus 106 ~~~~~~~~~~-~~~~~~al~~~~~ 128 (437)
T TIGR00792 106 YILLGLFYSF-VNIPYWSLVPAIT 128 (437)
T ss_pred HHHHHHHHHh-hcccHhhCccccc
Confidence 5566777775 45676444 4443
No 223
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.57 E-value=1e+02 Score=32.50 Aligned_cols=80 Identities=19% Similarity=0.134 Sum_probs=50.7
Q ss_pred hHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccC----CCccccCCCcchhhHHHHHHHHHhhhHHHHHhhch
Q 015467 299 LIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYS----GGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 374 (406)
Q Consensus 299 ~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siP 374 (406)
++.+=.|++|++.+..++-++--++.+ .+.+.-+...+ +.....++| +...++++..++|+.=++.++.=
T Consensus 301 ~l~~rir~fg~~~~~~~~~~~~~~~~~---li~l~~p~dap~~~t~~~~~~~~~---~~~~~~ii~~l~G~~D~~~~t~~ 374 (461)
T KOG3098|consen 301 ILSKRIRGFGRKPTVLIGIIIHLIGFL---LIHLSFPNDAPLRPTDSPPLLFTP---SYYLALIIGFLLGFGDACFNTQR 374 (461)
T ss_pred HHhhhhhhcccCcchhHHHHHHHHHHH---HHhccccccCCCCCCccccccccc---chhHHHHHHHHHhhHHHHHHHHH
Confidence 344555678888877666544332222 22221122221 222334455 66789999999999999999999
Q ss_pred hhhhhccccc
Q 015467 375 FAITAELTAD 384 (406)
Q Consensus 375 faLl~~~~~~ 384 (406)
|.+++...++
T Consensus 375 ~~ii~~~~~~ 384 (461)
T KOG3098|consen 375 YVIIALLYPD 384 (461)
T ss_pred HHHHHHHhcC
Confidence 9999988754
No 224
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=74.31 E-value=2 Score=46.91 Aligned_cols=115 Identities=13% Similarity=0.066 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc--------c---c-c--------C
Q 015467 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGI--------E---H-G--------I 346 (406)
Q Consensus 287 ~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~--------~---~-~--------~ 346 (406)
..|.+..++..++...+.+|+++|+...++.++++++.+...+-.+.. ..|..+- . . . .
T Consensus 75 s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~-~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 153 (633)
T TIGR00805 75 GSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLS-GRYSYSTTVSSTGNLSSANSFLCMENLTQAL 153 (633)
T ss_pred ehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhc-CCccccccccccccccccccccccCCCCCCc
Confidence 345666677777888899999999999999999887766544433211 1111000 0 0 0 0
Q ss_pred CCc---------c--h-hhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhccc
Q 015467 347 GAN---------Q--A-IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ 404 (406)
Q Consensus 347 ~~~---------~--~-~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQ 404 (406)
.|. + . .....++.-.+.|+.-+....+-.+++.+..+ +++.|.++|+++.+..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~--~~~~~~~~~i~~~~~~iG~ 221 (633)
T TIGR00805 154 RPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK--SKNSPLYIGILESIAVFGP 221 (633)
T ss_pred cccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC--ccccHHHHHHHHHHHHhhh
Confidence 000 0 0 12334456678888888888888888888765 4678999999998876653
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=72.15 E-value=9.3 Score=40.65 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHH-HhhhHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT-LLGFPL 367 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~Gi~w 367 (406)
...+..+..-+-..+.+|+|.|.+-+.|-++.+++++...|.+ +.+..++..+ +.|+..
T Consensus 90 ~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~--------------------~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 90 LLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT--------------------SLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHhhccc
Confidence 3334444455556778999999999999888888887777665 4555444333 445666
Q ss_pred HHHhhchhhhhhcccc
Q 015467 368 AITYSVPFAITAELTA 383 (406)
Q Consensus 368 A~~~siPfaLl~~~~~ 383 (406)
+..+.---.+++.|-+
T Consensus 150 ~~~~~paiviv~~YF~ 165 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE 165 (509)
T ss_pred hhhhcchhhhhhhHhH
Confidence 6666666667777753
No 226
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=72.13 E-value=79 Score=32.71 Aligned_cols=45 Identities=13% Similarity=0.128 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhh
Q 015467 352 IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNL 398 (406)
Q Consensus 352 ~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~ 398 (406)
+.|.+++++...|+.=+..+..=|..+++..++++|+. .||...+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REF--slg~vsv 378 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREF--SLGAVSV 378 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHH--HHHHHHH
Confidence 78999999999999999999999999998766444443 3444443
No 227
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.46 E-value=8.5 Score=31.27 Aligned_cols=42 Identities=24% Similarity=0.364 Sum_probs=30.2
Q ss_pred cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
+++.|.|-+..-+==+. |..|--|+....-+|+++|++.|+.
T Consensus 4 ~l~~~~~kL~~~iDf~g-QkkaEr~~q~ilti~aiVg~i~Gf~ 45 (101)
T KOG4112|consen 4 ILQDVQRKLVFPIDFPG-QKKAERFQQLILTIGAIVGFIYGFA 45 (101)
T ss_pred HHHHHHHhCCCcccCcc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666665544332233 4588889999999999999999964
No 228
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=67.33 E-value=1.8e+02 Score=30.97 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=27.5
Q ss_pred HHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcc
Q 015467 58 ARALLADLSGPDQRNSANAIFCSWMAVGNILGFS 91 (406)
Q Consensus 58 ~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~ 91 (406)
+=++.-|+++.+|-.+-+...+...++|.+++-.
T Consensus 165 FW~fAN~itt~~eAKRfYpl~g~ganigli~sG~ 198 (491)
T PF03219_consen 165 FWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQ 198 (491)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566679999999999999998888888887533
No 229
>PRK11462 putative transporter; Provisional
Probab=64.91 E-value=14 Score=38.32 Aligned_cols=74 Identities=9% Similarity=0.185 Sum_probs=38.1
Q ss_pred HHHHHhHHHhhh----hcCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHH
Q 015467 294 GVSSFLIEPMCR----WIGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (406)
Q Consensus 294 ~v~s~~l~~l~~----~ig~k~~~~~-s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA 368 (406)
++.-.++..+.+ |+||||-|++ +-+.+++++...+.. + . +++ .....-.++...+..+.++
T Consensus 59 ai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~----p-~--------~s~-~~~~~y~~~~~~~~~~~~t 124 (460)
T PRK11462 59 AISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST----P-D--------LSM-NGKMIYAAITYTLLTLLYT 124 (460)
T ss_pred HHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC----C-C--------CCc-chHHHHHHHHHHHHHHHHH
Confidence 344444444444 5799999985 445555443322111 1 0 001 0112234555556688887
Q ss_pred HHhhchhhhhhccc
Q 015467 369 ITYSVPFAITAELT 382 (406)
Q Consensus 369 ~~~siPfaLl~~~~ 382 (406)
..+ +||.-++.+.
T Consensus 125 ~~~-ipy~al~~~l 137 (460)
T PRK11462 125 VVN-IPYCALGGVI 137 (460)
T ss_pred HHh-ccHHHHHHHh
Confidence 776 7887665443
No 230
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=63.24 E-value=49 Score=33.57 Aligned_cols=81 Identities=6% Similarity=-0.054 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH
Q 015467 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360 (406)
Q Consensus 281 ~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (406)
++.+=.+.|. ++.++..++..+.+|+|||+.=++-.++.+++ .+.+.+ | +.+..++-=
T Consensus 71 Ia~Lf~~Gf~-Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s----cl~k~~--------------~---~~~~L~~GR 128 (354)
T PF05631_consen 71 IAILFVAGFA-SSAIFGTFVGSLADRYGRKKACLLFCILYSLS----CLTKHS--------------S---NYPVLLLGR 128 (354)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH----HHHHhc--------------c---ccHHHHHHH
Confidence 4444333333 67778888999999999999876555555433 334422 1 445555555
Q ss_pred HHhhhHHHHHhhchhhhhhcccc
Q 015467 361 TLLGFPLAITYSVPFAITAELTA 383 (406)
Q Consensus 361 ~~~Gi~wA~~~siPfaLl~~~~~ 383 (406)
.+-|++.+.+.+..=+=+-.+|+
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~ 151 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHN 151 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999888877766555543
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=62.10 E-value=26 Score=36.35 Aligned_cols=38 Identities=8% Similarity=0.150 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhHHHhhh----hcCchHHHHH-HHHHHHHH
Q 015467 286 LLLNSVVLGVSSFLIEPMCR----WIGSRLVWAI-SNFIVFAC 323 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~----~ig~k~~~~~-s~~~fai~ 323 (406)
+++.-+.-++...++..+.+ |+|+||-|++ +.+..+++
T Consensus 48 ~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 48 FLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVV 90 (473)
T ss_pred HHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHH
Confidence 44555566666666677777 5699888775 54555444
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=61.28 E-value=18 Score=38.10 Aligned_cols=92 Identities=17% Similarity=0.068 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA 368 (406)
++.-..+..+....+.+|+|.|++...+.++-+++-+.+.+.... ..+.++++=.+.|++.+
T Consensus 82 ~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------------------~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 82 FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------------------GFYLLLVLRFLQGLGQG 143 (466)
T ss_pred HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------------------cchhhHHHHHHhHHHHh
Confidence 334455566666789999999999999988877655555544321 23466778888999999
Q ss_pred HHhhchhhhhhcccccCCCCcceeehhhhhhh
Q 015467 369 ITYSVPFAITAELTADSGGGQGLAIGVLNLAI 400 (406)
Q Consensus 369 ~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i 400 (406)
+....=..++++-.+. .+.+...+++....
T Consensus 144 ~~~pa~~~i~~~W~P~--~Ers~~~ail~~g~ 173 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPP--NERSTFIAILTAGS 173 (466)
T ss_pred HHHhhhhceeeeECCH--HHHHHHHHHHHHHH
Confidence 8888888888877652 34455555554443
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=61.21 E-value=2.2e+02 Score=31.35 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=60.3
Q ss_pred hhhhHHHHHHhhhccccchhhHHHHHhcCCCchh---hhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcc
Q 015467 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ---RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAA 113 (406)
Q Consensus 37 I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~q---q~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~ 113 (406)
..+..+|+.+.-.++-.+-...-|+..|..+++| +..++.|.-...++|+.++..+-.. ..+..+-.+..
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~--l~~~~~~fg~~----- 157 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPI--LRGDVGCFGCQ----- 157 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcccccC-----
Confidence 3445677888888888888889999999987643 5577777777888888877554322 11100000000
Q ss_pred cchhHHHHHHHHHHHHHHhhheee
Q 015467 114 CGNLKAAFLVAVVFLTLCALVTIY 137 (406)
Q Consensus 114 ~~q~~~~f~i~ai~l~~~~~~Tl~ 137 (406)
.-....|.+.++++++++++-..
T Consensus 158 -~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 158 -DCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHH
Confidence 02567888888888887776433
No 234
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=60.92 E-value=20 Score=32.36 Aligned_cols=97 Identities=21% Similarity=0.207 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHH
Q 015467 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 362 (406)
Q Consensus 283 s~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (406)
.+....+.+...+.+.+...+.+|.|+|+.+..+...+.++.+...+.. + ...+..++....
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~~~~~~~ 103 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP----N--------------VGLALLLILRLL 103 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc----c--------------chHHHHHHHHHH
Confidence 3444455555555557778888888999888877765433322222211 0 023444445555
Q ss_pred hhhHHHHHhhchhhhhhcccccCCCCcceeehhhhh
Q 015467 363 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNL 398 (406)
Q Consensus 363 ~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~ 398 (406)
.|+..+.....-.+++++..++ .+..|...++...
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 138 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFPE-ATERGLAVGLVTL 138 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHH
Confidence 8899998888888888887653 1234444444443
No 235
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=60.12 E-value=6.1 Score=40.52 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=48.2
Q ss_pred hhhhHHHHHHhhhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccc
Q 015467 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFP 103 (406)
Q Consensus 37 I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~ 103 (406)
|+.+=+|+|++|.++--. +-|..|++||...++.|..+...-.++.++++-+...++.|+
T Consensus 393 VaaaR~GLW~fDlAVtqi-------mQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F~ 452 (503)
T KOG2601|consen 393 VAAARLGLWMFDLAVTQI-------MQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDFG 452 (503)
T ss_pred HHHHHhhHHhccHHHHHH-------HHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCcccee
Confidence 444458999999987433 349999999999999999999999999999997655555554
No 236
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=59.54 E-value=67 Score=33.47 Aligned_cols=78 Identities=9% Similarity=0.048 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHH-HHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHH
Q 015467 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFAC-MATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 367 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~w 367 (406)
..+..++.+-+|..++++-|.|+-|+......++. ++++.++ |+....+..+++.++..+.+
T Consensus 67 a~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i-----------------~~~s~~~~~l~~~il~~i~~ 129 (438)
T COG2270 67 AGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI-----------------PPGSYLLLLLLFLILASIGF 129 (438)
T ss_pred HHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh-----------------CCCchHHHHHHHHHHHHHhc
Confidence 33445556667778888889888887665544432 2223332 22236788888999999999
Q ss_pred HHHhhchhhhhhcccc
Q 015467 368 AITYSVPFAITAELTA 383 (406)
Q Consensus 368 A~~~siPfaLl~~~~~ 383 (406)
...+..=-+++.+..+
T Consensus 130 ~~s~Vfyds~L~~~~~ 145 (438)
T COG2270 130 EFSNVFYDSMLPRLTT 145 (438)
T ss_pred chhheehhhHhhhhcC
Confidence 9888888888887654
No 237
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=58.84 E-value=9.3 Score=40.27 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=57.6
Q ss_pred hccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhccc-ccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSA-GASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~-g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
++.-..|+-+|+++.+++|++|+..-++.+++..-..+++|-++ |.+.|+. ++.|..+....++
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t---------------g~~r~g~~~l~~l 456 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT---------------GSQRYGFLFLLVL 456 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------CCchhHHHHHHHH
Confidence 56667899999999999999999999999999988889998665 4432221 1456766666666
Q ss_pred HHHHhhheeeEeecc
Q 015467 128 LTLCALVTIYFADEV 142 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~ 142 (406)
+++..++ +..++++
T Consensus 457 f~~gl~l-l~~v~~~ 470 (477)
T PF11700_consen 457 FLIGLIL-LFFVDVE 470 (477)
T ss_pred HHHHHHH-Hhhccch
Confidence 6666665 3566664
No 238
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=58.28 E-value=15 Score=28.65 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=39.4
Q ss_pred hhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCC
Q 015467 70 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLT 145 (406)
Q Consensus 70 qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~l~~~~~~Tl~~v~E~p~~ 145 (406)
-|.++.-+......+++++++++|.+. .+++..+.+-++.++++.++ .+|.-|.-
T Consensus 5 gQ~~ae~l~~~il~~~~iisfi~Gy~~------------------q~~~~~~~~~~~g~~~~~lv---~vP~Wp~y 59 (76)
T PF06645_consen 5 GQRLAEKLMQYILIISAIISFIVGYIT------------------QSFSYTFYIYGAGVVLTLLV---VVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHhh---eeCCcHhh
Confidence 467888899999999999999999751 25666666666666666554 55776653
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=57.25 E-value=7.5 Score=39.80 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhHHHhhhh----cCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHH
Q 015467 285 GLLLNSVVLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 359 (406)
Q Consensus 285 gL~~~siv~~v~s~~l~~l~~~----ig~k~~~~~-s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (406)
.+++..+.-++...++..+.+| +||||-|++ +.+.+++++...+.. + .++ . ....+..++.
T Consensus 50 i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~----p-~~~--------~-~~~~~~~~~~ 115 (444)
T PRK09669 50 MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT----P-DFG--------A-TGKIIYACVT 115 (444)
T ss_pred HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC----C-CCC--------c-chHHHHHHHH
Confidence 3555555566666666666665 788888874 555555544322211 1 110 0 1123344555
Q ss_pred HHHhhhHHHHHhhchhhhhhc
Q 015467 360 FTLLGFPLAITYSVPFAITAE 380 (406)
Q Consensus 360 ~~~~Gi~wA~~~siPfaLl~~ 380 (406)
..+.++.++. ..+||.-+..
T Consensus 116 ~~l~~~~~t~-~~ip~~al~~ 135 (444)
T PRK09669 116 YILLSLVYTA-INVPYCAMPG 135 (444)
T ss_pred HHHHHHHHHh-hcchHHHhHH
Confidence 5666777774 6678876553
No 240
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.93 E-value=25 Score=36.93 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=56.6
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHh
Q 015467 292 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 371 (406)
Q Consensus 292 v~~v~s~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~ 371 (406)
.-.++.++-|.+++++|.|....++-..++....+.++ | |.+-.++.-++.|+..|.+.
T Consensus 62 ~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~------------------~---N~y~~yfssallG~Gaallw 120 (461)
T KOG3098|consen 62 FFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF------------------P---NSYYLYFSSALLGFGAALLW 120 (461)
T ss_pred HHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh------------------c---chHHHHHHHHHhhhhHHhee
Confidence 35567788899999999999999887777654443222 1 67888999999999998433
Q ss_pred hchhhhhhcccccC--CCCcceeehhhhhhhhc
Q 015467 372 SVPFAITAELTADS--GGGQGLAIGVLNLAIVI 402 (406)
Q Consensus 372 siPfaLl~~~~~~~--~~~~G~~mgllN~~i~l 402 (406)
.===.-++++..++ +|..++--++++++..+
T Consensus 121 ~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~ 153 (461)
T KOG3098|consen 121 TGQGGYLTSNSTRETIERNISIFWAIGQSSLII 153 (461)
T ss_pred cccceehhhcCChhhHHHHHHHHHHHHHHHHHh
Confidence 32223333332211 23344445555554443
No 241
>PRK09848 glucuronide transporter; Provisional
Probab=54.74 E-value=36 Score=34.79 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhh----cCchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHH
Q 015467 286 LLLNSVVLGVSSFLIEPMCRW----IGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~----ig~k~~~~-~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (406)
+++..+..++.+.+...+.+| .|||+.|+ ++.+..+++.... +.. +. .+.+ ....+..++..
T Consensus 50 ~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~~---~~--------~~~~-~~~~~~~~~~~ 116 (448)
T PRK09848 50 LLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FWV---PT--------DWSH-SSKVVYAYLTY 116 (448)
T ss_pred HHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-HhC---cC--------CCCc-chHHHHHHHHH
Confidence 455556666677777777666 48888874 3444333322211 111 00 0000 01223344555
Q ss_pred HHhhhHHHHHhhchhhhhhc
Q 015467 361 TLLGFPLAITYSVPFAITAE 380 (406)
Q Consensus 361 ~~~Gi~wA~~~siPfaLl~~ 380 (406)
.+.++.++..+ +||.-+..
T Consensus 117 ~~~~~~~~~~~-~~~~al~~ 135 (448)
T PRK09848 117 MGLGLCYSLVN-IPYGSLAT 135 (448)
T ss_pred HHHHHHHHHhc-ccHhhhhh
Confidence 67788887665 46655443
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=52.22 E-value=52 Score=34.92 Aligned_cols=52 Identities=15% Similarity=0.152 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHhhhHHHHHhhchhhhhhcccccCCCCcceeehhhhhhhhcccc
Q 015467 352 IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQV 405 (406)
Q Consensus 352 ~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~~~~~G~~mgllN~~i~lpQi 405 (406)
+.+..+++=.+.|+..++..-.=-++++..-. +++.|.-||+++.+..++++
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~--~~e~g~r~~~~~a~~~~g~i 184 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYG--KSERGLRMGIWYASASLGNI 184 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcC--hhhhhhhHHHHHHhcchhhH
Confidence 56777888888899888765555566677665 45789999999999888876
No 243
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=51.33 E-value=98 Score=31.77 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhc-CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~i-g~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
+.+..++....++..|.+.+|. ++|.......+++.+++++..+.. .++. +....++|
T Consensus 249 lsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P-----------------~~~~----~lw~~llG 307 (395)
T COG2807 249 LSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP-----------------GQLP----ILWALLLG 307 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh-----------------hhHH----HHHHHHHh
Confidence 5556678899999999999864 567777766666666666655432 1111 22247788
Q ss_pred hHHHHHhhchhhhhhcccc
Q 015467 365 FPLAITYSVPFAITAELTA 383 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~~ 383 (406)
+.++....+--.++....+
T Consensus 308 ~G~G~~F~laL~li~~rs~ 326 (395)
T COG2807 308 LGQGGAFPLALTLILLRSS 326 (395)
T ss_pred CccchHHHHHHHHHHhhcC
Confidence 8888877766666665543
No 244
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=48.92 E-value=19 Score=37.18 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=63.6
Q ss_pred hhccccchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhhhcccchhHHHHHHHHHH
Q 015467 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (406)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~~~~~~q~~~~f~i~ai~ 127 (406)
++...+-.-|.=.+++.+||+...++.++..+-+.++|..++..+|.. +.+.++...+. -+|+..+.+++.++
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~--l~~~~~vt~~~-----f~~l~~lili~~~~ 401 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAF--LMELFGVTRDD-----FSNLWLLILICSVI 401 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCCccc-----ccchHHHHHHHHHH
Confidence 344445566777889999999999999999999999999999999875 55555533322 35788888887777
Q ss_pred HHHHhhheeeEeecc
Q 015467 128 LTLCALVTIYFADEV 142 (406)
Q Consensus 128 l~~~~~~Tl~~v~E~ 142 (406)
-++.+....+-.|++
T Consensus 402 ~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 402 QLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHcCCCc
Confidence 766655543333433
No 245
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=47.53 E-value=1.1e+02 Score=32.48 Aligned_cols=125 Identities=11% Similarity=0.123 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHH---HHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHh
Q 015467 227 LPPAMHVVLIVMA---LTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPM 303 (406)
Q Consensus 227 mP~~~~~l~~v~f---fsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l 303 (406)
-|+.+..+..+++ |+.+|....+.+|..+- +-.| -+-+|.+++ .-+|.++-++| ++..+=..+
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~---~~~g---Lg~~~~~A~---~l~~~y~slVY-----~t~i~GG~l 84 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQ---LGDG---LGFDETHAT---GLFSAYGSLVY-----LTPIIGGWL 84 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHh---cccc---CCcChHhhH---HHHHHHHHHHH-----HHHHHHHHH
Confidence 6888888888888 78888888777775321 1111 110111111 13344433333 233344566
Q ss_pred hhh-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhccc
Q 015467 304 CRW-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELT 382 (406)
Q Consensus 304 ~~~-ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~ 382 (406)
++| +|.|++-++|-++.+++-+ ++...++ ......++-.+++++..+-.=+.|=+++++..
T Consensus 85 aDr~LG~~~tI~lGail~~iGh~---~L~~~~~---------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly 146 (498)
T COG3104 85 ADRVLGTRRTIVLGAILMAIGHL---VLAISSV---------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELY 146 (498)
T ss_pred HHHhcchhHHHHHHHHHHHHHHH---HHhcccc---------------ccccHHHHHHHHHHhccccccccHHHHHHHhc
Confidence 666 5889888888777776554 2221100 02355667777777889999999999999875
Q ss_pred c
Q 015467 383 A 383 (406)
Q Consensus 383 ~ 383 (406)
+
T Consensus 147 ~ 147 (498)
T COG3104 147 P 147 (498)
T ss_pred C
Confidence 4
No 246
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=45.65 E-value=3.4e+02 Score=27.58 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=29.7
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccc
Q 015467 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMG 257 (406)
Q Consensus 216 ~~~~i~~si~~mP~~~~~l~~v~ffsW~g~f~~~~y~T~~vg 257 (406)
.+++-++.+++ .+.+..++++|.+==.+.+.|.+.=|.-..
T Consensus 232 ~~~~a~~~i~~-d~ril~LG~~qslFE~smy~FVflWtPaL~ 272 (354)
T PF05631_consen 232 SFREAWRAILS-DPRILLLGLIQSLFEGSMYLFVFLWTPALD 272 (354)
T ss_pred HHHHHHHHHHc-CchhHHHHHHHHHHHHHHHHheeeeeceec
Confidence 45555666654 577889999999888888888777776443
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=44.15 E-value=61 Score=32.37 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=65.0
Q ss_pred cchhhhhHHHHHHhhhccccchhhHHHHHhcCCCch---hhhhHHHHHHHHHHhhhhhhcccccccccccccccccchhh
Q 015467 34 TRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPD---QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRAC 110 (406)
Q Consensus 34 ~~~I~~~v~g~~llD~s~n~~q~P~RAli~D~~p~~---qq~~a~a~~s~~~glG~ilGy~~g~i~d~~~~~~~~~~~~~ 110 (406)
.....+..+|+.++=++.-..-.-.-+++.|-.+++ +++.++.|+=....+|+.+++....+. .+..
T Consensus 30 ~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i--~~~~-------- 99 (372)
T PF00854_consen 30 GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYI--QQNY-------- 99 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHCS--------
T ss_pred hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhh--cccc--------
Confidence 344577788888888888888888899999999875 566889999999999999998766541 1111
Q ss_pred hcccchhHHHHHHHHHHHHHHhhheee
Q 015467 111 CAACGNLKAAFLVAVVFLTLCALVTIY 137 (406)
Q Consensus 111 ~~~~~q~~~~f~i~ai~l~~~~~~Tl~ 137 (406)
-....|.++.+.++++++.-+.
T Consensus 100 -----~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 100 -----GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHC
T ss_pred -----chhhhhhHHHHHHHHHHHHHHh
Confidence 2467788888888887775443
No 248
>PF12832 MFS_1_like: MFS_1 like family
Probab=37.95 E-value=1.7e+02 Score=22.56 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHH
Q 015467 288 LNSVVLGVSSFLIEPMCRWIGSRLVWA 314 (406)
Q Consensus 288 ~~siv~~v~s~~l~~l~~~ig~k~~~~ 314 (406)
+-.++..+.+.+...+++|+++++.-.
T Consensus 43 i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 43 IRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 344567777778888999998876654
No 249
>PF13347 MFS_2: MFS/sugar transport protein
Probab=37.68 E-value=16 Score=37.25 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhHHHhhh----hcCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHh
Q 015467 289 NSVVLGVSSFLIEPMCR----WIGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 363 (406)
Q Consensus 289 ~siv~~v~s~~l~~l~~----~ig~k~~~~~-s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (406)
.-+.-++...++..+.+ |+||||-|++ +.++.++++..++... +.+. .+ ........+...+.
T Consensus 46 ~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~---p~~~--------~~-~~~~~~~~~~~~l~ 113 (428)
T PF13347_consen 46 GRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPP---PAGL--------SF-TAKLVWLFVFYILF 113 (428)
T ss_pred HHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccc---cchh--------hh-hhHHHHHHHHHHHH
Confidence 33344444445555555 7899988874 6666665554333221 0000 00 01122335555666
Q ss_pred hhHHHHHhhchhh-hhhccccc
Q 015467 364 GFPLAITYSVPFA-ITAELTAD 384 (406)
Q Consensus 364 Gi~wA~~~siPfa-Ll~~~~~~ 384 (406)
.+.|+.. .+||. ++++..++
T Consensus 114 ~~~~t~~-~i~~~al~~~lt~~ 134 (428)
T PF13347_consen 114 DIAYTFV-QIPYNALIPELTPD 134 (428)
T ss_pred HHhhhhc-cCchhhcCcccccc
Confidence 7777766 66755 44454443
No 250
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=35.47 E-value=70 Score=30.64 Aligned_cols=29 Identities=17% Similarity=0.537 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccce
Q 015467 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (406)
Q Consensus 230 ~~~~l~~v~ffsW~g~f~~~~y~T~~vg~ 258 (406)
-|+..|+.-.|-|+||+--..+.|+-.|+
T Consensus 163 F~~af~vAflFnwIGFlltycl~tT~agR 191 (262)
T KOG4812|consen 163 FMWAFIVAFLFNWIGFLLTYCLTTTHAGR 191 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Confidence 47888999999999999888888876665
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=32.29 E-value=40 Score=35.12 Aligned_cols=47 Identities=23% Similarity=0.359 Sum_probs=41.6
Q ss_pred HHHHHHhhhccc-cchhhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhcccccc
Q 015467 41 VIGFWLLDLANN-TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (406)
Q Consensus 41 v~g~~llD~s~n-~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~g~i 95 (406)
=+|+|..|.+.+ .+| +.+|+++|+.-++.++.+..+-..+-|.++.+
T Consensus 367 R~GLW~fDL~~~qi~Q--------e~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 367 RIGLWSFDLAVTQIMQ--------ENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHhhhHHHHHhhc--------ccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 489999999876 555 58999999999999999999999999999865
No 252
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=29.84 E-value=1.9e+02 Score=29.94 Aligned_cols=74 Identities=15% Similarity=0.258 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
++.+++....|+-.+.|-.++-|.+-|..++. | =+|.++|.. +...++.+.+...+...+.+|+|
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~--G------------Ls~~~iG~i-~s~~~~~~l~~qp~~G~i~Dklg 71 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVA--G------------LSGTEIGII-FSAGSLFALLAQPVYGFISDKLG 71 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHH-HHHHHHHHHHTHHHHHHHHHHCT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--C------------CCHHHHHHH-HHHHHHHHHHHHHhHHHhcchhh
Confidence 44555555554444444444444677776511 1 012244433 33344555666666678889988
Q ss_pred chH--HHHHHH
Q 015467 309 SRL--VWAISN 317 (406)
Q Consensus 309 ~k~--~~~~s~ 317 (406)
.|+ +|.++-
T Consensus 72 ~kK~Ll~~i~~ 82 (412)
T PF01306_consen 72 LKKHLLWFIAI 82 (412)
T ss_dssp TCSHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 654 455443
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=28.79 E-value=2.9e+02 Score=28.70 Aligned_cols=84 Identities=8% Similarity=0.078 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCch-HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhh
Q 015467 286 LLLNSVVLGVSSFLIEPMCRWIGSR-LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 364 (406)
Q Consensus 286 L~~~siv~~v~s~~l~~l~~~ig~k-~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 364 (406)
.+...+..++..+..+.+.+|+..| |+.. ++++..+.++.+..+... + .+.....+..++++.+.|
T Consensus 51 ~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~-~lv~~~~~~~~~~~l~~~--~----------~~~~~~f~~~~~~v~~~g 117 (437)
T TIGR00939 51 TLASQLPSLLFNSLNLFLIFRIPVTVRLLG-GLVILLVVVILVMVLVKV--Q----------TSETGFFVTTMASVVIIN 117 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccchhHH-HHHHHHHHHHHHhheeee--c----------CCcchHHHHHHHHHHHHH
Confidence 3344445555666677777887652 3332 333332222222222110 0 011124566778888899
Q ss_pred hHHHHHhhchhhhhhccc
Q 015467 365 FPLAITYSVPFAITAELT 382 (406)
Q Consensus 365 i~wA~~~siPfaLl~~~~ 382 (406)
++-+....-=|++.+.+-
T Consensus 118 ~~~~~~q~s~~gla~~fp 135 (437)
T TIGR00939 118 SGMALLQGSLFGLAGVFP 135 (437)
T ss_pred hhhhhhcccchhhcccCC
Confidence 999999999999988764
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=26.06 E-value=2.5e+02 Score=29.55 Aligned_cols=124 Identities=15% Similarity=0.190 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 015467 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (406)
Q Consensus 229 ~~~~~l~~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig 308 (406)
..+..+...+.|+|.-+-+...+...+..+. ++.|-. .++ -+-.|++.= .-.+.+.+.+..+.-+.++.|
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct-~~~~~~--~~~--~~~~~~~~~-----~~~~~~~i~s~~iG~lSD~~g 90 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACT-FGDDYQ--LEN--GLLLGVKQV-----TAGLLTLISSPLIGALSDRYG 90 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcc-cccCcc--chh--hhhhhHHHH-----hhHHHHHHHHhhhHHhhhhhh
Confidence 3556677778899998888777766555542 221111 111 122222211 123466778888899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhhhhcccccC
Q 015467 309 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 385 (406)
Q Consensus 309 ~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaLl~~~~~~~ 385 (406)
||.......+..- +... +..+ ..|..+++.++.| .++++.+.=|+.+++-+..+
T Consensus 91 rk~~L~~~~~~~~---l~~~-~~~~------------------~~~~~~~~~~l~g-~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 91 RKVVLLLPLFGTI---LPAL-CLLF------------------QGYWFFLLLGLSG-GFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhhhHHHHHHHHH---HhHH-HHHH------------------HHHHHhhhccccc-chhhhhhhhhhheeeccchh
Confidence 9988776643321 2211 2211 2244444555544 56777778888888776543
No 255
>PTZ00207 hypothetical protein; Provisional
Probab=25.56 E-value=1.1e+02 Score=33.32 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=26.6
Q ss_pred hhHHHHHhcCCCchhhhhHHHHHHHHHHhhhhh
Q 015467 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNIL 88 (406)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~il 88 (406)
.++-..+.+..| ++|+++.++...+.++|+.+
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHH
Confidence 356667888876 77899999999999999975
No 256
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=24.84 E-value=5.6e+02 Score=23.81 Aligned_cols=92 Identities=16% Similarity=0.261 Sum_probs=52.0
Q ss_pred HHHHHHhccCCHHHHHHH-HHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHH
Q 015467 218 VNLLTSLRHLPPAMHVVL-IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVS 296 (406)
Q Consensus 218 ~~i~~si~~mP~~~~~l~-~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~ 296 (406)
-.-|+.+.+.|+.++++. .+-+++-+|.+. .+|+.++. +.|=+| ||++|.+.+++-.++
T Consensus 48 ~~hY~~l~~sP~~v~~~Lh~v~~lglig~~i-----------Kl~kp~e~------~~lFdg---~SL~Ly~~~i~vYlt 107 (196)
T PF08229_consen 48 ETHYQTLHNSPPIVKYILHIVIGLGLIGLLI-----------KLYKPSES------NKLFDG---ASLVLYVFGICVYLT 107 (196)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------HHcCCcHH------hhcccc---hhHHHHHHHHHHHhH
Confidence 456777888998876544 333344333322 15654432 233333 588888888766655
Q ss_pred HHhHHHhhhhc----------CchHHHHHHHHHHHHHHHHHHHH
Q 015467 297 SFLIEPMCRWI----------GSRLVWAISNFIVFACMATTAII 330 (406)
Q Consensus 297 s~~l~~l~~~i----------g~k~~~~~s~~~fai~~~~~~~i 330 (406)
. +.|.+.... ..-++...||++.++++.+..++
T Consensus 108 n-i~~gi~~~~~~~~~~v~r~~~l~VlAASn~Ii~~~LvGVLvL 150 (196)
T PF08229_consen 108 N-IVPGIRSVSSGNWGEVDREDGLRVLAASNTIIALVLVGVLVL 150 (196)
T ss_pred h-hHhHHHhcCCCCcccccHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5 445443221 12245677888877776665554
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=23.53 E-value=2.8e+02 Score=29.38 Aligned_cols=65 Identities=12% Similarity=0.206 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhhhhhcccccceeeecCCCCCCchhhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHH
Q 015467 236 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 315 (406)
Q Consensus 236 ~v~ffsW~g~f~~~~y~T~~vg~~Vy~gdp~a~~~~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~~ig~k~~~~~ 315 (406)
..|-+.|+.|-+..-|...|-|. . ...-|-..+|-+++....+.--.+.++.|+|....+
T Consensus 55 ~SN~~qWI~ya~i~n~~~~~Ygs------~--------------~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 55 FSNGMQWIQYAPINNYVNSFYGS------S--------------SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred hcCcchheeehhHHHHHHHHhcc------h--------------HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 34557899998887777766551 1 111244445555555555555555566666655554
Q ss_pred HHHHH
Q 015467 316 SNFIV 320 (406)
Q Consensus 316 s~~~f 320 (406)
+-.+-
T Consensus 115 gt~ln 119 (480)
T KOG2563|consen 115 GTVLN 119 (480)
T ss_pred HHHHH
Confidence 44433
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=23.09 E-value=83 Score=33.43 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=42.4
Q ss_pred HhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCccccCCCcchhhHHHHHHHHHhhhHHHHHhhchhhh
Q 015467 298 FLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAI 377 (406)
Q Consensus 298 ~~l~~l~~~ig~k~~~~~s~~~fai~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Gi~wA~~~siPfaL 377 (406)
++...+.+++|||++|...+++..+|-++..+- .+.+ |+.+-...+.+.=.++||.-+-=+=+-=++
T Consensus 102 l~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s---------~~~~----~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI 168 (538)
T KOG0252|consen 102 LFFGWLGDKFGRKKVYGKELIIMIICSALSGLS---------VGTT----SPLGVMMTLCFFRFLLGIGIGGDYPLSATI 168 (538)
T ss_pred HHHHHHHhhhcchhhhhHHHHHHHHHHHHhccC---------CCCC----CCcchhhHHHHHHHHhhccccCCCcchHHH
Confidence 667888999999999999988887654422211 1111 111122334444456666655554444455
Q ss_pred hhcccc
Q 015467 378 TAELTA 383 (406)
Q Consensus 378 l~~~~~ 383 (406)
.+|+..
T Consensus 169 ~SE~an 174 (538)
T KOG0252|consen 169 MSESAN 174 (538)
T ss_pred hhhhhh
Confidence 666644
No 259
>PF13630 SdpI: SdpI/YhfL protein family
Probab=21.66 E-value=3.5e+02 Score=20.17 Aligned_cols=35 Identities=11% Similarity=0.146 Sum_probs=27.0
Q ss_pred hhHhHHhhhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 015467 271 EVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (406)
Q Consensus 271 ~~~~y~~Gvr~Gs~gL~~~siv~~v~s~~l~~l~~ 305 (406)
+++.++++-|.++..+....++..+.++++..+.+
T Consensus 19 s~~~W~~a~r~~g~~~~~~Gi~~~~~~~~~~~~~~ 53 (76)
T PF13630_consen 19 SDENWKKAHRFAGKIFIIGGIVLLIIGIIILFLNK 53 (76)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888899888888888888888877666554
No 260
>COG5487 Small integral membrane protein [Function unknown]
Probab=20.46 E-value=1.4e+02 Score=21.57 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHHHHHhhhe
Q 015467 116 NLKAAFLVAVVFLTLCALVT 135 (406)
Q Consensus 116 q~~~~f~i~ai~l~~~~~~T 135 (406)
-.|++|.+..++++++....
T Consensus 30 iAkIlF~i~~vlf~vsL~~g 49 (54)
T COG5487 30 IAKILFFIFLVLFLVSLFAG 49 (54)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35899999999999887754
No 261
>PF11628 TCR_zetazeta: T-cell surface glycoprotein CD3 zeta chain; InterPro: IPR021663 The TCR complex of T-lymphocytes consists of either a TCR alpha/beta or TCR gamma/delta heterodimer co-expressed at the cell surface with the invariant subunits of CD3 labelled gamma, delta, epsilon, zeta, and eta []. The zeta subunit forms either homodimers or heterodimers with eta [], but eta homodimers have not been observed. The structure of the zetazeta transmembrane dimer consists of a left-handed coiled coil with polar contacts. Two aspartic acids are critical for zetazeta dimerisation and assembly with TCR []. The high affinity immunoglobulin epsilon receptor (IgE Fc receptor) subunit gamma associates with a variety of FcR alpha chains to form a functional signaling complex. The gamma subunit has a critical role in allowing the IgE Fc receptor to reach the cell surface and regulates several aspects of the immune response []. This family includes both CD3 zeta subunits and IgE Fc receptor gamma subunits. The gamma chain of the high affinity Fc receptor for IgE has significant structural homology to CD3 zeta and the related CD3 eta subunit and can facilitate T cell receptor expression and signaling in the absence of CD3 zeta and CD3 eta [].; PDB: 2HAC_B.
Probab=20.44 E-value=40 Score=22.01 Aligned_cols=26 Identities=8% Similarity=0.294 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhhheeeEeeccC
Q 015467 118 KAAFLVAVVFLTLCALVTIYFADEVP 143 (406)
Q Consensus 118 ~~~f~i~ai~l~~~~~~Tl~~v~E~p 143 (406)
+.++++-.++++-++++|.++.||+=
T Consensus 3 ~lCYiLDgiL~iYgiiiT~L~~R~K~ 28 (33)
T PF11628_consen 3 RLCYILDGILFIYGIIITALYCREKF 28 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHHHh
Confidence 57888999999999999999999973
Done!