BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015468
(406 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/340 (79%), Positives = 292/340 (85%), Gaps = 4/340 (1%)
Query: 62 YGVAPDASS-DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
Y AP AS+ + IRSLWIGDLQPWMEE+Y+ F TGE VS KVIRNKQT EGYGFI
Sbjct: 77 YVAAPQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFI 136
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
E + AAAER+LQT+NGT MP++EQNFRLNWAT GAGERR DD PD+TIFVGDLA+DVTD
Sbjct: 137 ELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTD 196
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
YVLQETFR Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLR+M EMNG+ CSTRPMR
Sbjct: 197 YVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMR 256
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
IGPAATKK GQQ+QKA++QNTQG+QGE+DPNNTTIFVGGLD +VTDD L+ VF QYGE
Sbjct: 257 IGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGE 316
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQW 358
LVHVKIP GKRCGFVQFANR CAEQAL+ LNGTQLG QSIRLSWGRSPSNKQ+ DQAQW
Sbjct: 317 LVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQW 376
Query: 359 NGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQP 398
NGG Y AQGYEAYGYAPP QDPNMYYG +PGYG YQQP
Sbjct: 377 NGGYYGY-AQGYEAYGYAPPPQDPNMYYGAYPGYGNYQQP 415
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/351 (75%), Positives = 295/351 (84%), Gaps = 5/351 (1%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
VP P+Q + A S I+SLWIGDLQ WM+E Y+ +IF TGE VS KVIRNKQT
Sbjct: 44 VPLPTQYGVAGAASGGAESSEIKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQT 103
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
EGYGFIEF++ AAAER+LQT+NGTQMP+TEQNFRLNWAT AGERRQDDGPD+T+FV
Sbjct: 104 GMPEGYGFIEFINRAAAERILQTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFV 163
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDLA DV D++LQETFR VY SVKGAKVVTDR TGR+KGYGFVRFGDE+EQ R+M EMNG
Sbjct: 164 GDLAPDVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNG 223
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
CSTR MRIGPAATKK A QQYQKA YQ+TQG+QGENDPNNTTIFVG LDPSV+D+ L
Sbjct: 224 QYCSTRAMRIGPAATKKPAV-QQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHL 282
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+ VFG+YGELVHVKIPAGKRCGFVQFANR CAEQAL LNGTQL GQSIRLSWGRSPSNK
Sbjct: 283 RQVFGKYGELVHVKIPAGKRCGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNK 342
Query: 352 QS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGS 400
Q+ DQ+QWNGG Y AQGY+AYGYAPP QDPNMYY G+PGYG YQQPG+
Sbjct: 343 QAQPDQSQWNGGYYGY-AQGYDAYGYAPP-QDPNMYYSGYPGYGNYQQPGT 391
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/336 (77%), Positives = 282/336 (83%), Gaps = 10/336 (2%)
Query: 66 PDASS-DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P AS+ + IRSLWIGDLQPWMEE+Y F TGE VS KVIRNKQT EGYGFIE +
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
AAAER+LQT+NGT MP++EQNFRLNWAT GAGERR DD PD+TIFVGDLA+DVTDYVLQ
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQ 185
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETFR Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLR+M EMNG+ CSTRPMRIGPA
Sbjct: 186 ETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPA 245
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
ATKK A++QNTQG QGE+DPNNTTIFVGGLD +VTDD L+ VF QYGELVHV
Sbjct: 246 ATKKPV------GASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHV 299
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGG 362
KIP GKRCGFVQFANR CAEQAL+ LNGTQLG QSIRLSWGRSPSNKQ+ DQAQWNGG
Sbjct: 300 KIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGY 359
Query: 363 YYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQP 398
Y AQGYEAYGYAPP QDPNMYYG +PGYG YQQP
Sbjct: 360 YGY-AQGYEAYGYAPPPQDPNMYYGAYPGYGNYQQP 394
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/330 (72%), Positives = 274/330 (83%), Gaps = 5/330 (1%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
++D +R+LWIGDLQ WM+E+YI S F HTGE S KVIRNKQT EGYGFIEF SH A
Sbjct: 84 NADEVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTA 143
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQT+NGT MP+ EQNFRLNWA++ G++R DD PDFTIFVGDLAADVTDY+LQ+TFR
Sbjct: 144 ERILQTYNGTPMPNGEQNFRLNWASFSGGDKR-DDTPDFTIFVGDLAADVTDYILQDTFR 202
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVV DR TGR+KGYGFVRFGDESEQ+R+MT+MNG CSTRPMRIG A K
Sbjct: 203 VHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKN 262
Query: 249 AATGQQYQKATYQNTQG-SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
A TGQQY KA+YQN+Q + ENDPNNTTIFVG LD +VTDD L+ +FG+YG+L+HVKIP
Sbjct: 263 AVTGQQYPKASYQNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIP 322
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYG 365
AGKRCGFVQFA+R+CAE+AL +LNGT L GQSIRLSWGRSPSNK Q D QWN GYYG
Sbjct: 323 AGKRCGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPSNKQPQPDANQWN-AGYYG 381
Query: 366 FAQGYEAYGYAPPTQDPNMYYGGFPGYGTY 395
+AQGYE YGYAP QDPNMYYG +PGYG Y
Sbjct: 382 YAQGYENYGYAPAPQDPNMYYGNYPGYGNY 411
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/285 (80%), Positives = 253/285 (88%), Gaps = 1/285 (0%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A D I+SLWIGDLQ WM+E+YI SIF TGE V KVIRNKQT + EGYGFIEFVSHAA
Sbjct: 61 AVGDEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAA 120
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER+LQT+NGT MP++EQ FRLNWAT GAGERRQDDGPD+T+F+GDLAADV DY+LQETF
Sbjct: 121 AERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETF 180
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
R VYSSVKGAKVVTDR TGRSKGYGFVRF DE+EQ+R+M EMNG CSTRPMRIGPAATK
Sbjct: 181 RNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATK 240
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
K T QQYQKA YQ+ QG+QGE+DPNNTTIFVG LDPSVTDD L+ VF +YGELVHVKIP
Sbjct: 241 KPLT-QQYQKAAYQSPQGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIP 299
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
AGKRCGFVQFANRTCAEQALS+LNGTQ+ GQ+IRLSWGRSPSNKQ
Sbjct: 300 AGKRCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/289 (80%), Positives = 254/289 (87%), Gaps = 3/289 (1%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
I+SLWIGDLQ WM+E+Y+ SIF TGE V KVIRNKQT + EGYGFIEFVS AAAER+L
Sbjct: 68 IKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERIL 127
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP++EQ FRLNWAT GAGERRQDDGPDFT+FVGDLAADV DY+LQETFR VY
Sbjct: 128 QTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYP 187
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTDR TGRSKGYGF+RF DE+EQ R+M EMNG CSTRPMRIGPAATKK T
Sbjct: 188 SVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLT- 246
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
QQYQKATYQN QG+QGENDPNNTTIFVG LDPSVTDD L+ VF +YGELVHVKIPAGKRC
Sbjct: 247 QQYQKATYQNPQGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC 306
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWN 359
GFVQFANRT AEQALS+LNGTQ+ GQ+IRLSWGRSPSNKQ DQ+QWN
Sbjct: 307 GFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSNKQVQPDQSQWN 355
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/355 (70%), Positives = 280/355 (78%), Gaps = 12/355 (3%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PPSQ P S+D +R+LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 42 WAPS-AQPPSQSVAP---PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVI 97
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQT+ SEGYGFIEF S A AERVLQT+NGT MP+ QNFRLNWAT+ AGERR DD PD
Sbjct: 98 RNKQTSQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPD 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
TIFVGDLAADVTDY+LQETFRA Y S KGAKVV DR TGR+KGYGFVRFGDESEQ+R+M
Sbjct: 158 HTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAM 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+EM GVLCSTRPMRIGPA+ K +T Q KA+YQN QG+Q E+DPNNTTIFVG LDP+V
Sbjct: 218 SEMQGVLCSTRPMRIGPASNKNPST-QSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNV 276
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
TDD L+ VFGQYGELVHVKIPAGKRCGFVQFA+R+CAE+AL VLNGT LGGQ++RLSWGR
Sbjct: 277 TDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGR 336
Query: 347 SPSNKQS--DQAQWN----GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTY 395
SPSNKQ+ D QWN GG Y GYE YGYAP QDPNM YG +PGY Y
Sbjct: 337 SPSNKQAQPDANQWNGSGGGGYYGYAQGGYENYGYAPAGQDPNM-YGSYPGYANY 390
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 282/356 (79%), Gaps = 15/356 (4%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K G Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKN--LGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 284
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R+ AE+AL VLNGT LGGQ++RLSWG
Sbjct: 285 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWG 344
Query: 346 RSPSNKQS--DQAQWNGGGYY--GFAQGYEAYGYAPPT-QDPNMYYGGFP-GYGTY 395
RSP+NKQ+ D QWNG Y G+AQGYE Y YAPP QDPNM YG +P GY +Y
Sbjct: 345 RSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNM-YGSYPAGYASY 399
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/356 (68%), Positives = 281/356 (78%), Gaps = 15/356 (4%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D + +LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVETLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K G Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKN--LGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 284
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R+ AE+AL VLNGT LGGQ++RLSWG
Sbjct: 285 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWG 344
Query: 346 RSPSNKQS--DQAQWNGGGYY--GFAQGYEAYGYAPPT-QDPNMYYGGFP-GYGTY 395
RSP+NKQ+ D QWNG Y G+AQGYE Y YAPP QDPNM YG +P GY +Y
Sbjct: 345 RSPANKQTQQDPNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNM-YGSYPAGYASY 399
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/347 (71%), Positives = 276/347 (79%), Gaps = 10/347 (2%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PPSQ P S+D +R+LWIGDLQ WM+E+Y+ + HTGE S KVIRNKQT+
Sbjct: 44 PPSQSVAP---PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQ 100
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
SEGYGFIEF S A AERVLQT+NGT MP+ QNFRLNWAT AGERR DD PD TIFVGD
Sbjct: 101 SEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGD 160
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LAADVTDY+LQETFRA Y S+KGAKVV DR TGR+KGYGFVRFGDESEQ+R+MTEM GVL
Sbjct: 161 LAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVL 220
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
CSTRPMRIGPA+ K +T Q KA+YQN QG+Q E+DPNNTTIFVG LDP+VTDD L+
Sbjct: 221 CSTRPMRIGPASNKNPST-QSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQ 279
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
VFG YGELVHVKIPAGKRCGFVQFA+R+CAE+AL VLNGT LGGQ++RLSWGRSPSNKQ+
Sbjct: 280 VFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQA 339
Query: 354 --DQAQWN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTY 395
D QWN GG Y GYE YGYAP QDPNM YG +PGY Y
Sbjct: 340 QPDANQWNGSGGGYYGYAQGGYENYGYAPAGQDPNM-YGSYPGYANY 385
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/376 (68%), Positives = 290/376 (77%), Gaps = 26/376 (6%)
Query: 36 QHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG 95
QHQ P P W P PP QQ AS+D +R+LWIGDLQ WM+E+Y+ + F
Sbjct: 40 QHQAPQP---MWAPSAQPPLPQQP--------ASADEVRTLWIGDLQYWMDENYLYTCFA 88
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
HTGE S KVIRNKQT+ SEGYGFIEF S A AER+LQT+NG MP+ Q+FRLNWAT+
Sbjct: 89 HTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFS 148
Query: 156 AGER-RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
AGER RQDD PD+TIFVGDLAADVTDY+LQETFRA Y+SVKGAKVV DR TGR+KGYGFV
Sbjct: 149 AGERSRQDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFV 208
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ--GSQGENDP 272
RF +ESEQ+R+MTEM GVLCSTRPMRIGPA+ K AT Q KA+Y N+Q GSQ ENDP
Sbjct: 209 RFSEESEQMRAMTEMQGVLCSTRPMRIGPASNKTPAT-QSQPKASYLNSQPQGSQNENDP 267
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
NNTTIFVG LDP+VTDD L+ VF QYGELVHVKIPAGKRCGFVQFA+R+CAE+AL VLNG
Sbjct: 268 NNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNG 327
Query: 333 TQLGGQSIRLSWGRSPSNK--QSDQAQWN--------GGGYYGFAQGYEAYGYAPPTQDP 382
T LGGQ++RLSWGRSPSNK Q+D QWN GG Y AQGYE YGYAP QDP
Sbjct: 328 TLLGGQNVRLSWGRSPSNKQAQADPNQWNGAAGAGSGGGYYGYAAQGYENYGYAPAGQDP 387
Query: 383 NMYYGGFPGYGTYQQP 398
NM YG +PGY YQ P
Sbjct: 388 NM-YGSYPGYPGYQAP 402
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 280/356 (78%), Gaps = 15/356 (4%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 50 WAPNTQPP-----QQSAVPPPTSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 104
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNK N SEGYGF+EF+S A AERVLQT+NGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 105 RNKLNNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 164
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DR TGRSKGYGFVRF DESEQ+R+M
Sbjct: 165 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAM 224
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-GSQGENDPNNTTIFVGGLDPS 285
TEM GVLCSTRPMRIGPA+ K G Q KA+YQN Q G+Q ENDPNNTTIFVG LDP+
Sbjct: 225 TEMQGVLCSTRPMRIGPASNKN--LGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPN 282
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VTD+ LK VF QYGELVHVKIP+GKRCGFVQFA+R+ AE+AL VLNGT LGGQ++RLSWG
Sbjct: 283 VTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWG 342
Query: 346 RSPSNKQS--DQAQWNG-GGYY-GFAQGYEAYGYAPPT-QDPNMYYGGFP-GYGTY 395
RSP+NKQ+ D QWNG GY+ G+AQGYE Y YAPP QDPNM YG +P GY +Y
Sbjct: 343 RSPANKQTQQDPNQWNGSSGYFGGYAQGYENYAYAPPAGQDPNM-YGSYPAGYASY 397
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/320 (74%), Positives = 272/320 (85%), Gaps = 4/320 (1%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIRNKQT SEGYGFIEF++ A
Sbjct: 60 ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 119
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+TIFVGDLA DVTDYVLQETF
Sbjct: 120 AERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETF 177
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
RA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+MTEMNGV CS+RPMRIGPAA K
Sbjct: 178 RARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANK 237
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
+ GQQ+ K +YQN QG+Q ENDPNNTTIFVG LD +VTD+ L+ VFGQYGELVHVKIP
Sbjct: 238 NTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIP 297
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQAQWNGGGYYG 365
GKRCGFVQFA+R CAE+AL VLNGTQ+GGQ+IRLSWGRSPSNKQ +D QWNGGGYYG
Sbjct: 298 VGKRCGFVQFADRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYG 357
Query: 366 FAQGYEAYGYAPPTQDPNMY 385
+ QGYE Y YAP QDPNM+
Sbjct: 358 YGQGYENYSYAPAPQDPNMF 377
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 270/408 (66%), Positives = 303/408 (74%), Gaps = 22/408 (5%)
Query: 4 QPPSQPSDQ---TSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQ 60
QPP P Q Q QQ QQ Q W Q PSQQ
Sbjct: 9 QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQQ----PSQQQ- 63
Query: 61 PYGV--------APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
YG +P + + +RSLWIGDLQ WM+E+Y+++ F HTGE VS KVIRNKQT
Sbjct: 64 -YGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTG 122
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
SEGYGF+EF SHAAAE +LQT+NGT MP+ EQNFR+NWA+ GAGERR DD + TIFVG
Sbjct: 123 QSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFVG 181
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DLAADVTDY+LQETF++VYSSV+GAKVVTDR TGRSKGYGFV+F DESEQLR+MTEMNGV
Sbjct: 182 DLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGV 241
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
LCSTRPMRIGPAA KK QKATYQN Q +QGE+DPNNTTIFVGGLDP+V ++ L+
Sbjct: 242 LCSTRPMRIGPAANKKPVGTP--QKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLR 299
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
VF YGELVHVKI AGKRCGFVQF R AEQALS LNGTQLGGQSIRLSWGRSPS+KQ
Sbjct: 300 QVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQ 359
Query: 353 SDQAQW--NGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQP 398
+DQ QW +GG YYG+ QGYEAYGYAPP QDPNMYYG +PGY YQQP
Sbjct: 360 TDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQP 407
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/320 (74%), Positives = 269/320 (84%), Gaps = 9/320 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWMEE+Y+ +IF TG+ S KVIRNKQ+ +SEGYGFIEFV+HA A
Sbjct: 76 SAGEIRSLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATA 135
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGT MPS++Q FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 136 ERILQAYNGTTMPSSDQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 195
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 196 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQYCSSRPMRTGPAANKK 255
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+QGE+DP NTTIFVG LD SV +D LK+VFGQ+GELVHVKIPA
Sbjct: 256 PLT---MQPASYQNTQGNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPA 312
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQA----QWNGGG 362
GKRCGFVQ+ANR CAEQALS+LNGTQLGGQSIRLSWGRSPSNKQ+ DQA GG
Sbjct: 313 GKRCGFVQYANRACAEQALSLLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGGGY 372
Query: 363 YYGFAQGYEAYGYAPPTQDP 382
Y QGYEAYGYAPP QDP
Sbjct: 373 YGYPPQGYEAYGYAPPPQDP 392
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/330 (72%), Positives = 270/330 (81%), Gaps = 13/330 (3%)
Query: 62 YGVA---PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
YG+ P ++SD ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYG
Sbjct: 46 YGIGSQNPGSASD-VKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYG 104
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAAD 177
FIEFVSH+ AERVLQT+NG MPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +
Sbjct: 105 FIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPE 164
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTR
Sbjct: 165 VTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTR 224
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFG 296
PMRIGPAA K A Q A YQNTQG+ G+NDPNNTTIFVGGLD +VTDD LK++FG
Sbjct: 225 PMRIGPAANKNALP---MQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFG 281
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
Q+GEL+HVKIP GKRCGFVQ+AN+ AE ALSVLNGTQLGGQSIRLSWGRSP NKQSDQA
Sbjct: 282 QFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQA 340
Query: 357 QWNGGGYYGF-AQGYEAYGYA--PPTQDPN 383
QWNGGGYYG+ Q YGYA PPTQDPN
Sbjct: 341 QWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/330 (72%), Positives = 270/330 (81%), Gaps = 13/330 (3%)
Query: 62 YGVA---PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
YG+ P ++SD ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYG
Sbjct: 46 YGIGSQNPGSASD-VKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYG 104
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAAD 177
FIEFVSH+ AERVLQT+NG MPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +
Sbjct: 105 FIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPE 164
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTR
Sbjct: 165 VTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTR 224
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFG 296
PMRIGPAA K A Q A YQNTQG+ G+NDPNNTTIFVGGLD +VTDD LK++FG
Sbjct: 225 PMRIGPAANKNALP---MQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFG 281
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
Q+GEL+HVKIP GKRCGFVQ+AN+ AE ALSVLNGTQLGGQSIRLSWGRSP NKQSDQA
Sbjct: 282 QFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQA 340
Query: 357 QWNGGGYYGF-AQGYEAYGYA--PPTQDPN 383
QWNGGGYYG+ Q YGYA PPTQDPN
Sbjct: 341 QWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/331 (71%), Positives = 266/331 (80%), Gaps = 11/331 (3%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
Q YGV ++SLWIGDLQ WM+E+YI S+F +GE S KVIRNK T SEGYGF
Sbjct: 50 QQYGVGSQNPGSEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGF 109
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADV 178
IEF++H+ AERVLQT+NG QMPSTEQ FRLNWA GAGE+R Q +GPD TIFVGDLA +V
Sbjct: 110 IEFINHSVAERVLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEV 169
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+L +TF+ VY SVKGAKVV DRTTGRSKGYGFVRF DE+EQ+R+MTEMNG CSTRP
Sbjct: 170 TDYMLSDTFKNVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRP 229
Query: 239 MRIGPAATKKAATGQQYQKATYQNTQG-SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
MRIGPAA K A Q A YQNTQG + G++DPNNTTIFVGGLD +VTDD LK++FGQ
Sbjct: 230 MRIGPAANKNALP---MQPAMYQNTQGGNAGDSDPNNTTIFVGGLDANVTDDELKSIFGQ 286
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL+HVKIP GKRCGFVQ+ANR AE ALSVLNGTQLGGQSIRLSWGRSP NKQ DQAQ
Sbjct: 287 FGELLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSP-NKQPDQAQ 345
Query: 358 WNGGGYYGFA----QGYEAYGYAP-PTQDPN 383
WNGGGYYG+ GYE YGYA P QDPN
Sbjct: 346 WNGGGYYGYPPQPQGGYEPYGYAAQPNQDPN 376
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/318 (74%), Positives = 266/318 (83%), Gaps = 7/318 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWM+E+Y+ ++FG TGE + KVIRNKQ +SEGYGFIEFV+HA A
Sbjct: 75 SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQT+NG MPS+EQ FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 135 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 194
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVV DRTTGRSKGYGFVRF DESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 195 AVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKK 254
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+ GE+DP NTTIFVG +D SVT+D LK+VFGQ+GELVHVKIPA
Sbjct: 255 PLT---MQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPA 311
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQA--QWNGGGYY 364
GKRCGFVQ+ANR CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ+ DQA GG Y
Sbjct: 312 GKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYG 371
Query: 365 GFAQGYEAYGYAPPTQDP 382
QGYEAYGYAPP QDP
Sbjct: 372 YPPQGYEAYGYAPPPQDP 389
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/318 (74%), Positives = 266/318 (83%), Gaps = 7/318 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ IRSLWIGDLQPWM+E+Y+ ++FG TGE + KVIRNKQ +SEGYGFIEFV+HA A
Sbjct: 75 SAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQT+NG MPS+EQ FRLNWA GAGERRQ +GP+ T+FVGDLA DVTD++L ETF+
Sbjct: 135 ERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFK 194
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
AVYSSVKGAKVV DRTTGRSKGYGFVRF DESEQ+R+MTEMNG CS+RPMR GPAA KK
Sbjct: 195 AVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKK 254
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q A+YQNTQG+ GE+DP NTTIFVG +D SVT+D LK+VFGQ+GELVHVKIPA
Sbjct: 255 PLT---MQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPA 311
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQA--QWNGGGYY 364
GKRCGFVQ+ANR CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ+ DQA GG Y
Sbjct: 312 GKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYG 371
Query: 365 GFAQGYEAYGYAPPTQDP 382
QGYEAYGYAPP QDP
Sbjct: 372 YPPQGYEAYGYAPPPQDP 389
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/365 (69%), Positives = 290/365 (79%), Gaps = 15/365 (4%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P Q QP A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIRN
Sbjct: 47 PQAGSPQGQPPQP------ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRN 100
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
KQT SEGYGFIEF++ AAERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+T
Sbjct: 101 KQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYT 158
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDLA DVTDYVLQETFRA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+MTE
Sbjct: 159 IFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTE 218
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
MNGV CS+RPMRIGPAA K + QQ+ K +YQN G+Q ENDPNNTTIFVG LD +VTD
Sbjct: 219 MNGVHCSSRPMRIGPAANKNTSGSQQFSKTSYQNPPGTQNENDPNNTTIFVGNLDSNVTD 278
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
+ L+ VF QYGELVHVKIPAGKRCGFVQF++R+CAE+AL +LNGT +GGQ+IRLSWGRSP
Sbjct: 279 EHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSP 338
Query: 349 SNK--QSDQAQWN-----GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSY 401
SNK Q+D QWN GGGYYG+ QGYE Y YAP QDPNM+Y G+ GYG YQQP +
Sbjct: 339 SNKQPQADPNQWNGGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPATQ 398
Query: 402 QQPQQ 406
Q QQ
Sbjct: 399 QPSQQ 403
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGF-A 367
RCGFVQ++NR AE+A+ +LNG+QLGGQSIRLSWGRSP NK Q DQ QWN GYYG+
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN-AGYYGYPP 362
Query: 368 QGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QGY+ YGYA P QDP MY Y +PGYG Y
Sbjct: 363 QGYDPYGYARPPQDPAMYAYAAYPGYGNY 391
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGF-A 367
RCGFVQ++NR AE+A+ +LNG+QLGGQSIRLSWGRSP NK Q DQ QWN GYYG+
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN-AGYYGYPP 362
Query: 368 QGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QGY+ YGY P QDP MY Y +PGYG Y
Sbjct: 363 QGYDPYGYVRPPQDPAMYAYAAYPGYGNY 391
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 244 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 303
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGF-A 367
RCGFVQ++NR AE+A+ +LNG+QLGGQSIRLSWGRSP NK Q DQ QWN GYYG+
Sbjct: 304 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN-AGYYGYPP 362
Query: 368 QGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QGY+ YGY P QDP MY Y +PGYG Y
Sbjct: 363 QGYDPYGYVRPPQDPAMYAYAAYPGYGNY 391
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/327 (72%), Positives = 267/327 (81%), Gaps = 13/327 (3%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+Y+ + F HTGE S KVIRNKQT+ SEGYGFIEF S A AER
Sbjct: 63 DEVRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAER 122
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+LQT+NG MP+ Q+FRLNWAT+ AGER R DD PD+TIFVGDLAADVTDY+LQETFRA
Sbjct: 123 ILQTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRA 182
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y+SVKGAKVV DR TGR+KGYGFVRF DESEQ+R+MTEM GVLCSTRPMRIGPA+ K
Sbjct: 183 RYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIGPASNKTP 242
Query: 250 ATGQQYQKATYQNTQ--GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
T Q KA+YQN+Q GSQ ENDPNNTTIFVG LDP+VTDD L+ VF QYGELVHVKIP
Sbjct: 243 TT-QSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIP 301
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWN------ 359
AGKRCGFVQFA+R+CAE+AL VLNGT LGGQ++RLSWGRSPSNK Q+D QWN
Sbjct: 302 AGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQADPNQWNGGAGSG 361
Query: 360 GGGYYGFAQGYEAYGYAPPT-QDPNMY 385
GG Y AQGYE YGYAP QDPNMY
Sbjct: 362 GGYYGYAAQGYENYGYAPAAGQDPNMY 388
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/319 (71%), Positives = 264/319 (82%), Gaps = 4/319 (1%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A++D +R+LWIGDLQ WM+E+YIAS F HTGE S K+IRNKQT+ EGYGFIE SH A
Sbjct: 44 ATADEVRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGA 103
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER+LQT+NGT MP+ EQNFRLNWA++ G++R DD PDFTIFVGDLAADVTD++LQETF
Sbjct: 104 AERILQTYNGTPMPNGEQNFRLNWASFSGGDKR-DDSPDFTIFVGDLAADVTDFMLQETF 162
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
RA + SVKGAKVV DR TGR+KGYGFVRFGDESEQLR+MTEMNG CSTRPMR+G A+ K
Sbjct: 163 RAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASNK 222
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
KA GQQY KA+YQN Q Q + DPNNTTIFVG LD +V DD LK +FGQYG+L+HVKIP
Sbjct: 223 KAVVGQQYPKASYQNPQ-PQNDGDPNNTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIP 281
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYG 365
AGKRCGFVQFA+R+ AE+AL +LNG QL GQ+IRLSWGR+PSNKQ+ D Q+ GG Y
Sbjct: 282 AGKRCGFVQFADRSSAEEALKMLNGAQLSGQNIRLSWGRNPSNKQAQPDANQYGGGYYGY 341
Query: 366 FAQGYEAYGYAPPTQDPNM 384
QGYE YGYAP TQDPNM
Sbjct: 342 GQQGYENYGYAPATQDPNM 360
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 108 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 167
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 168 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 227
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 228 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 287
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
GQQ ATYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GK
Sbjct: 288 GGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGK 347
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGF-A 367
RCGFVQ++NR AE+A+ +LNG+QLGGQSIRLSWGRSP NK Q DQ QWN GYYG+
Sbjct: 348 RCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN-AGYYGYPP 406
Query: 368 QGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QGY+ YGY P QDP MY Y +PGYG Y
Sbjct: 407 QGYDPYGYVRPPQDPAMYAYAAYPGYGNY 435
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/380 (65%), Positives = 284/380 (74%), Gaps = 19/380 (5%)
Query: 34 QQQHQTPVPPPVGWTPQPVPPP--SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
QQ HQ P P P P +Q QP AS+D +R+LWIGDLQ WM+E+Y+
Sbjct: 17 QQYHQAPPQQPYVMMPPQAPQALWAQSAQP--PQQPASADEVRTLWIGDLQYWMDENYLY 74
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
+ FG+TGE S KVIRNKQT+ SEGYGFIEF + A+AERVLQT+ G MP+ Q++RLNW
Sbjct: 75 TCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNW 134
Query: 152 ATYGAGER--RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
AT+ AGER RQDDGPD TIFVGDLAADVTDY+LQETFRA Y+SVKGAKVV DR TGRSK
Sbjct: 135 ATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSK 194
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFVRF DE EQ+R+MTEM GVLCSTRPMRIGPA K A Q KA+Y NT G Q E
Sbjct: 195 GYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQ-AKASYSNTPGGQSE 253
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
NDPNNTTIFVG LDP+VTDD L+ VF QYGELVHVKIP+GKRCGFVQF++R+ AE+A+ V
Sbjct: 254 NDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRV 313
Query: 330 LNGTQLGGQSIRLSWGRSPSNKQS--DQAQWN-------GGGYYGFAQGYEAYGY--APP 378
LNGT LGGQ++RLSWGR+PSNKQ+ D QWN GG Y GYE YGY AP
Sbjct: 314 LNGTLLGGQNVRLSWGRTPSNKQTQQDPNQWNAAAAGGGGGYYGYPQGGYENYGYAAAPA 373
Query: 379 TQDPNMYYGGFPGYGTYQQP 398
QDPN+ YG +PGY YQ P
Sbjct: 374 GQDPNV-YGSYPGYAGYQHP 392
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/386 (63%), Positives = 278/386 (72%), Gaps = 21/386 (5%)
Query: 1 MMQQPPSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQ 60
MMQQPP QQ YQQ S P PP W PQ PPS Q
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPSPYGIAGAAPP--PPQMWNPQAAAPPSAQPM 58
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
+ D IR+LWIGDLQ WM+E+++ F HTGE VS KVIRNKQT EGYGFI
Sbjct: 59 --------TVDEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFI 110
Query: 121 EFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
EF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R DD PD+TIFVGDLAADVT
Sbjct: 111 EFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVT 169
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
DY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DESEQ+R+MTEMNGV CSTRPM
Sbjct: 170 DYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPM 229
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
RIGPAA+KK TG Q+ +YQ+ G +NDPNNTT+FVGGLD SVTDD LK VFGQY
Sbjct: 230 RIGPAASKKGVTG---QRDSYQSAAGGVPTDNDPNNTTVFVGGLDQSVTDDHLKNVFGQY 286
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-DQAQ 357
GE+VHVKIPAGKRCGFVQF+ ++CAE+AL +LNG QLGG ++RLSWGRSPSNKQS D +Q
Sbjct: 287 GEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSADPSQ 346
Query: 358 WNGGGYYGFAQGYEAYGYAPPTQDPN 383
+ GGY QG E YGY P QDPN
Sbjct: 347 FYYGGY---GQGQEQYGYTMP-QDPN 368
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/345 (67%), Positives = 267/345 (77%), Gaps = 19/345 (5%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 265
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ ++CAE+AL +LNG QLGG +
Sbjct: 266 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTT 325
Query: 340 IRLSWGRSPSNKQS-DQAQWNGGGYYGFAQGYEAYGYAPPTQDPN 383
+RLSWGRSPSNKQS D +Q+ GGY QG E YGY P QDPN
Sbjct: 326 VRLSWGRSPSNKQSGDPSQFYYGGY---GQGQEQYGYTMP-QDPN 366
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/344 (65%), Positives = 263/344 (76%), Gaps = 15/344 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +R+LW+GDLQ WM+E+Y+ S FG+ E VS K+IRNKQT SEGYGF+EF SHA A
Sbjct: 74 SADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQ NG QMP+TEQ +RLNWAT+G GE+R + GPD+ IFVGDLA+DVTDY+LQETFR
Sbjct: 134 ERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFR 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y +VKGAKVV+DR TGRSKGYGFVRFGDE+EQ+R+MTEMNG+ CS+RPMR GPA TKK
Sbjct: 194 SRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKK 253
Query: 249 AATGQQ---YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
QQ A Q +NDPNNTTIFVGGLDPSVTD++L+ +FGQ+GELVHVK
Sbjct: 254 TTGFQQPYPKAAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVK 313
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-----------D 354
IP GKRCGFVQF NR AE+AL +L+GT LG Q+IRLSWGRSP+NKQ D
Sbjct: 314 IPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQQPD 373
Query: 355 QAQWNGGGYYGFAQGYEA-YGYAPPTQDPNMYYGGFPGYGTYQQ 397
QWNG YYG+ QGY+A YGYAP QDPNMY YG YQQ
Sbjct: 374 PNQWNGAAYYGYGQGYDAGYGYAPQPQDPNMYSYAPYAYGNYQQ 417
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/331 (66%), Positives = 260/331 (78%), Gaps = 14/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +R+LW+GDLQ WM+E+Y+ S FG+ E VS K+IRNKQT SEGYGF+EF SHA A
Sbjct: 74 SADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER LQ NG QMP+TEQ +RLNWAT+G GE+R + GPD+ IFVGDLA+DVTDY+LQETFR
Sbjct: 134 ERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETFR 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y +VKGAKVV+DR TGRSKGYGFVRFGDE+EQ+R+MTEMNG+ CS+RPMR GPA TKK
Sbjct: 194 SRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKK 253
Query: 249 AATGQQ-YQKATYQN-TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
QQ Y KA Q +NDPNNTTIFVGGLDPSVTD++L+ +FGQ+GELVHVKI
Sbjct: 254 TTGFQQPYPKAAAAVPPQVVASDNDPNNTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKI 313
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-----------DQ 355
P GKRCGFVQF NR AE+AL +L+GT LG Q+IRLSWGRSP+NKQ D
Sbjct: 314 PVGKRCGFVQFNNRASAEEALQMLHGTVLGQQAIRLSWGRSPANKQVQTPGWVQPQQPDP 373
Query: 356 AQWNGGGYYGFAQGYEA-YGYAPPTQDPNMY 385
QWNG YYG+ QGY+A YGYAP QDPNMY
Sbjct: 374 NQWNGAAYYGYGQGYDAGYGYAPQPQDPNMY 404
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/345 (66%), Positives = 266/345 (77%), Gaps = 19/345 (5%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 37 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 88
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRL WA+ +G++R
Sbjct: 89 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKR 148
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV +R TGR+KGYGFVRF DES
Sbjct: 149 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDES 207
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 208 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 264
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ ++CAE+AL +LNG QLGG +
Sbjct: 265 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTT 324
Query: 340 IRLSWGRSPSNKQS-DQAQWNGGGYYGFAQGYEAYGYAPPTQDPN 383
+RLSWGRSPSNKQS D +Q+ GGY QG E YGY P QDPN
Sbjct: 325 VRLSWGRSPSNKQSGDPSQFYYGGY---GQGQEQYGYTMP-QDPN 365
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 263/328 (80%), Gaps = 3/328 (0%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+LWIGDLQ WM+E+Y+ S F GE +S K+IRNKQT EGYGFIEF +HA AE+
Sbjct: 67 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQ 126
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD++LQ+TF++
Sbjct: 127 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSR 186
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DRTTGRSKGYGFV+F D EQ R+MTEMNG CS+R MR+GPA+ KK
Sbjct: 187 YPSVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKNT 246
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G Q A YQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGEL++VKIP GK
Sbjct: 247 GGPQPSSAIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGK 306
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQ 368
RCGFVQ++NR AE+A+ VLNG+QLGGQSIRLSWGRSP+NK Q +Q+QW+GGGYYG+ Q
Sbjct: 307 RCGFVQYSNRASAEEAIRVLNGSQLGGQSIRLSWGRSPANKQPQQEQSQWSGGGYYGYPQ 366
Query: 369 GYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
GY+ YGYA P QDP MY Y +PGYG Y
Sbjct: 367 GYDPYGYARPPQDPAMYAYAAYPGYGNY 394
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/362 (61%), Positives = 265/362 (73%), Gaps = 28/362 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +++LW+GDLQ WM+E+Y+ + F HTGE S K+IRNKQT +SEGYGF+EFVSHAAA
Sbjct: 3 SHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAA 62
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQ +NGTQMP+TEQ FRLNWA++G GERR + GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 63 EKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFR 122
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFVRFGDE E+ R+M+EMNGV CS+RPMRI A KK
Sbjct: 123 TRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKK 182
Query: 249 AATGQQYQK----------ATYQ------NTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
+ Q ATY + Q +NDPNNTTIFVGGLDP+V D+ L+
Sbjct: 183 SLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLR 242
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
VFGQ+GELV+VKIPAGK CGFVQF +R CAE+AL L+ T +G Q++RLSWGRSP NKQ
Sbjct: 243 NVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQ 302
Query: 353 S---------DQAQWNGGGYY-GFAQGYEAYGY-APPTQDPNMY-YGGFPGYGTYQQPGS 400
+ D QWN GGYY G+AQGY+ YGY A P QDP YG +PGYG Y Q G
Sbjct: 303 TADPGWGQHQDPNQWNAGGYYQGYAQGYDQYGYPAQPPQDPAYAQYGNYPGYGNYPQQGD 362
Query: 401 YQ 402
Q
Sbjct: 363 AQ 364
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 262/329 (79%), Gaps = 4/329 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+LWIGDLQ WM+E+Y+ S F GE +S K+IRNKQT EGYGFIEF +HA AE+
Sbjct: 69 DEARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQ 128
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD++LQ+TF++
Sbjct: 129 VLQNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSR 188
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVK AKVV DRTTGRSKGYGFV+F D EQ R+MTEMNG CS+RPMR+GPA+ KK
Sbjct: 189 YPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKKNT 248
Query: 251 TGQ-QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GQ Q YQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGEL++VKIP G
Sbjct: 249 GGQPQPSSTIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVG 308
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFA 367
KRCGFVQ++NR AE+A+ +LNG+QLGGQSIRLSWGRSP+NK Q +Q QW+GGGYYG+
Sbjct: 309 KRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPANKQPQQEQNQWSGGGYYGYP 368
Query: 368 QGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QGY+ YGYA P QDP MY Y +PGYG Y
Sbjct: 369 QGYDPYGYARPPQDPAMYAYTPYPGYGNY 397
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/350 (61%), Positives = 259/350 (74%), Gaps = 25/350 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+++LW+GDLQ WM+E+Y+ + F HTGE S K+IRNKQT +SEGYGF+EFVSH AAE++L
Sbjct: 42 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKIL 101
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
Q +NGTQMP+TEQ FRLNWA++G GERR + GP+ +IFVGDLA DVTDY+LQETFR Y
Sbjct: 102 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 161
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFVRFGDE E+ R+M+EMNG+ CS+RPMRI A KK+
Sbjct: 162 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGP 221
Query: 253 QQYQK-------ATYQ------NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
Q ATY + Q +NDPNNTTIFVGGLDP+V D+ L+ VFGQ+G
Sbjct: 222 NQLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFG 281
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS------ 353
ELV+VKIPAGK CGFVQF +R CAE+AL L+ T +G Q++RLSWGRSP NKQ+
Sbjct: 282 ELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSPGNKQTSDPAWG 341
Query: 354 ---DQAQWNGGGYY-GFAQGYEAYGY-APPTQDPNMY-YGGFPGYGTYQQ 397
D QWN GYY G+AQGY+ YGY AP QDP YG +PGYG Y Q
Sbjct: 342 HHQDPNQWNAAGYYQGYAQGYDQYGYPAPAPQDPAYAQYGNYPGYGNYPQ 391
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/302 (66%), Positives = 239/302 (79%), Gaps = 6/302 (1%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+YI + F +GE V+ K+IRNKQT SE YGFIEF +HAAAER+LQT+N T MP+ E
Sbjct: 1 MDENYIRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
QN+RLNWA YG+GE+R +D D+TIFVGDLA DVTDY LQETFR Y SVKGAKVV DR
Sbjct: 61 QNYRLNWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRL 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
T RSKGYGFVRFGDESEQ R+M+EMNG++C R MRIG AA KK+ G A+YQN Q
Sbjct: 121 TSRSKGYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGG----TASYQNNQ 176
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
G+ ++DP+NTTIFVG LD +VTD+ L+ F YGELVHVKIPAGK+CGFVQF NR+ AE
Sbjct: 177 GTPNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSAE 236
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDP 382
+AL VLNG QLGG+++RLSWGRSP+N+QS DQ QWN YYG+ QGY++YGY QDP
Sbjct: 237 EALRVLNGMQLGGRNVRLSWGRSPNNRQSQPDQNQWNNAAYYGYPQGYDSYGYVSAPQDP 296
Query: 383 NM 384
NM
Sbjct: 297 NM 298
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P+ S ++++G+L + + ++ F GE V K+ KQ GF++F +
Sbjct: 179 PNDSDPSNTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC------GFVQFTNR 232
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNW 151
++AE L+ NG Q+ +N RL+W
Sbjct: 233 SSAEEALRVLNGMQLGG--RNVRLSW 256
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 263/340 (77%), Gaps = 18/340 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD +R+LWIGDLQ WM+E+YI S F +TGEF S K+IR+KQT +GYGF+EF SHAAAE
Sbjct: 87 SDEVRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAE 146
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
RVLQTFNG MP+ E +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 147 RVLQTFNGQMMPNVELAYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYMLQETFRV 203
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA +K
Sbjct: 204 HYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKT 263
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q+ NTQG+Q +NDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP G
Sbjct: 264 TGVQERVPIPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVG 323
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---DQAQW-------- 358
KRCGFVQ+ANR AEQAL +L GT +GGQ++RLSWGRSPSNKQ+ + QW
Sbjct: 324 KRCGFVQYANRPSAEQALQLLQGTLVGGQNVRLSWGRSPSNKQTQPQEATQWGAGAAAGA 383
Query: 359 NGGGYYGFAQGYEAY--GYAPPTQDPNMY-YGGFPGYGTY 395
GG Y G+ QGYEAY GYA P QDPNMY YG + GY Y
Sbjct: 384 AGGYYAGYGQGYEAYGQGYAQP-QDPNMYGYGAYAGYPNY 422
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/348 (61%), Positives = 257/348 (73%), Gaps = 24/348 (6%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+P QQ QP SSD +++LW+GDLQ WM+E Y+ + F HTGE VS K+IRNK T
Sbjct: 76 LPMVMQQHQP------QSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYT 129
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
SEGYGF+EF++ AAE+++QT+NGT MP+TEQ FR+NWAT+ GERR D GPDF+IFV
Sbjct: 130 GQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFV 189
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL +DV+D VLQETF++ YSSVK AKVV D TGRSKGYGFVRFG+ESE+ R+MTEMNG
Sbjct: 190 GDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNG 249
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQGENDPNNTTIFVGGLDPSVT 287
V CSTRPMRI A +K+A G Q+Q + N QG +ND NNTTIFVG LDP+ T
Sbjct: 250 VYCSTRPMRISAATPRKSA-GVQHQYSGRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNAT 308
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
D+ L+ VFGQYGELV VKIP GK CGFVQF NR AE+AL L+GT + Q++RLSWGRS
Sbjct: 309 DEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRS 368
Query: 348 PSNK----------QSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
P+NK QSD QWN G YYG QGYE+YGYAPP QDP MY
Sbjct: 369 PANKQQPQPQGQQPQSDPNQWN-GAYYG--QGYESYGYAPPPQDPAMY 413
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/349 (61%), Positives = 256/349 (73%), Gaps = 25/349 (7%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+P QQ QP SSD +++LW+GDLQ WM+E Y+ + F HTGE VS K+IRNK T
Sbjct: 76 LPMVMQQHQP------QSSDEVKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYT 129
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
SEGYGF+EF++ AAE+++QT+NGT MP+TEQ FR+NWAT+ GERR D GPDF+IFV
Sbjct: 130 GQSEGYGFMEFITRTAAEKIMQTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFV 189
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL +DV+D VLQETF++ YSSVK AKVV D TGRSKGYGFVRFG+ESE+ R+MTEMNG
Sbjct: 190 GDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNG 249
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG-----ENDPNNTTIFVGGLDPSV 286
V CSTRPMRI A +K+A G Q+Q + GS +ND NNTTIFVG LDP+
Sbjct: 250 VYCSTRPMRISAATPRKSA-GVQHQYSGRAGNGGSHAQGFPSDNDLNNTTIFVGRLDPNA 308
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
TD+ L+ VFGQYGELV VKIP GK CGFVQF NR AE+AL L+GT + Q++RLSWGR
Sbjct: 309 TDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGR 368
Query: 347 SPSNK----------QSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
SP+NK QSD QWN G YYG QGYE+YGYAPP QDP MY
Sbjct: 369 SPANKQQPQPQGQQPQSDPNQWN-GAYYG--QGYESYGYAPPPQDPAMY 414
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/342 (61%), Positives = 254/342 (74%), Gaps = 16/342 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
Q+GELV+VKIPAG+ CGFVQF RT AE+A+ + GT +G +R+SWGRSP+ KQ+D +
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQADPS 334
Query: 357 QWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
QW+ YYG+ QGY+AY Y TQDP++Y YG + GY Y Q
Sbjct: 335 QWS-SAYYGYGQGYDAYPYG-ATQDPSLYAYGAYAGYLQYPQ 374
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 250/328 (76%), Gaps = 15/328 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q+ + QG Q +NDPNNTTIFVGGLDP+VT+D+LK VF YG++VHVKIP GKRC
Sbjct: 297 QE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC 352
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ-SDQAQWNGGGYYGFAQGYE 371
GFVQ+ANR+ AE+AL +L GT +GGQ++RLSWGRSPSNKQ D QW G + G
Sbjct: 353 GFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQDSNQWAGANAGYYGYGQG 412
Query: 372 AYGYAPP-TQDPNMY------YGGFPGY 392
Y P +QDPNMY Y G+P Y
Sbjct: 413 YEAYGYPQSQDPNMYNYGAGAYAGYPNY 440
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/333 (64%), Positives = 251/333 (75%), Gaps = 15/333 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 36 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 95
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 96 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 152
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 153 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKT- 211
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
TG Q + N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 212 TGVQER---VPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 268
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQ 368
RCGFVQ+ NR AEQAL+VL GT +GGQ++RLSWGRS SNK Q D QW G G
Sbjct: 269 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYY 328
Query: 369 GYEAYGYAPPT-----QDPNMY-YGGFPGYGTY 395
G GY QDPNMY YG + GY Y
Sbjct: 329 GGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 361
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/331 (63%), Positives = 250/331 (75%), Gaps = 18/331 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q+ + QG Q +NDPNNTTIFVGGLDP+VT+D+LK VF YG++VHVKIP GKRC
Sbjct: 297 QE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC 352
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----QSDQAQWNGGGYYGFAQ 368
GFVQ+ANR+ AE+AL +L GT +GGQ++RLSWGRSPSNK Q D QW G +
Sbjct: 353 GFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGY 412
Query: 369 GYEAYGYAPP-TQDPNMY------YGGFPGY 392
G Y P +QDPNMY Y G+P Y
Sbjct: 413 GQGYEAYGYPQSQDPNMYNYGAGAYAGYPNY 443
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/331 (63%), Positives = 250/331 (75%), Gaps = 18/331 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 110 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 169
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 170 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 226
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 227 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 286
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q+ + QG Q +NDPNNTTIFVGGLDP+VT+D+LK VF YG++VHVKIP GKRC
Sbjct: 287 QE----KVPSAQGVQSDNDPNNTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC 342
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----QSDQAQWNGGGYYGFAQ 368
GFVQ+ANR+ AE+AL +L GT +GGQ++RLSWGRSPSNK Q D QW G +
Sbjct: 343 GFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGY 402
Query: 369 GYEAYGYAPP-TQDPNMY------YGGFPGY 392
G Y P +QDPNMY Y G+P Y
Sbjct: 403 GQGYEAYGYPQSQDPNMYNYGAGAYAGYPNY 433
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/333 (63%), Positives = 249/333 (74%), Gaps = 15/333 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 88 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 147
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 148 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 204
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 205 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 264
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 265 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 320
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQ 368
RCGFVQ+ NR AEQAL+VL GT +GGQ++RLSWGRS SNK Q D QW G G
Sbjct: 321 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYY 380
Query: 369 GYEAYGYAPPT-----QDPNMY-YGGFPGYGTY 395
G GY QDPNMY YG + GY Y
Sbjct: 381 GGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/355 (59%), Positives = 255/355 (71%), Gaps = 25/355 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----- 351
Q+GELV+VKIPAG+ CGFVQF RT AE+A+ + GT +G +R+SWGRSP+ K
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334
Query: 352 ----QSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQPGSY 401
Q+D +QW+ YYG+ QGY+AY Y TQDP++Y YG + GY Y Q Y
Sbjct: 335 SWGQQADPSQWS-SAYYGYGQGYDAYPYG-ATQDPSLYAYGAYAGYLQYPQQARY 387
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/333 (63%), Positives = 249/333 (74%), Gaps = 15/333 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 87 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 146
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 147 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 203
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 204 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 263
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 264 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 319
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQ 368
RCGFVQ+ NR AEQAL+VL GT +GGQ++RLSWGRS SNK Q D QW G G
Sbjct: 320 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYY 379
Query: 369 GYEAYGYAPPT-----QDPNMY-YGGFPGYGTY 395
G GY QDPNMY YG + GY Y
Sbjct: 380 GGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 412
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/333 (63%), Positives = 249/333 (74%), Gaps = 15/333 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LWIGDLQPWM+ESYI + F TGE S K+IR+KQ+ +GYGF+EF S AAA+R
Sbjct: 76 DEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADR 135
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+LQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 136 ILQTYNGQMMPNVEMVFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 192
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KK
Sbjct: 193 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTT 252
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+ N QG+Q ENDPNNTTIFVGGLDP+VT+D+LK VF YGE+VHVKIP GK
Sbjct: 253 GVQE----RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGK 308
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQ 368
RCGFVQ+ NR AEQAL+VL GT +GGQ++RLSWGRS SNK Q D QW G G
Sbjct: 309 RCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYY 368
Query: 369 GYEAYGYAPPT-----QDPNMY-YGGFPGYGTY 395
G GY QDPNMY YG + GY Y
Sbjct: 369 GGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNY 401
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/351 (59%), Positives = 254/351 (72%), Gaps = 25/351 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W++E+Y+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAA
Sbjct: 36 SVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAA 95
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFR
Sbjct: 96 ERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR 155
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A Y SV+GAKVVTD TGR+KGYGFV+F DE E+ R+MTEMNGV CSTRPMRI AAT K
Sbjct: 156 AQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRIS-AATPK 214
Query: 249 AATGQQYQKA------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
TG Q Q A T Q +ND NNTTIFVG LDP+VT++ LK +F
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----- 351
Q+GELV+VKIPAG+ CGFVQF RT AE+A+ + GT +G +R+SWGRSP+ K
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334
Query: 352 ----QSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
Q+D +QW+ YYG+ QGY+AY Y TQDP++Y YG + GY Y Q
Sbjct: 335 SWGQQADPSQWS-SAYYGYGQGYDAYPYG-ATQDPSLYAYGAYAGYLQYPQ 383
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/369 (60%), Positives = 270/369 (73%), Gaps = 33/369 (8%)
Query: 54 PPSQQTQPYGVAP------------------DASSDGIRSLWIGDLQPWMEESYIASIFG 95
PP QQ PYG AP A + +R+LWIGDLQ WM+E+Y+ F
Sbjct: 60 PPPQQAAPYGQAPPPPQHAAYYGAPAAPAQAPAGPNEVRTLWIGDLQYWMDENYVYGCFA 119
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
HTGE S K+IR+KQT +GYGF+EF + A AERVLQT+NG MP+ E +RLNWA+
Sbjct: 120 HTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQTYNGATMPNVEMPYRLNWAS-- 177
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
AGE+R DDGPD+TIFVGDLAADVTDY+LQETFR Y SVKGAKVVTD+ T RSKGYGFV+
Sbjct: 178 AGEKR-DDGPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKLTMRSKGYGFVK 236
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
F D +EQ R+MTEMNG++CS+RPMRIGPAA K+ +G Q + + QG Q ++DP+NT
Sbjct: 237 FSDPTEQTRAMTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPS---AQGVQSDSDPSNT 293
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
TIFVGGLDP+VT+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R+ +E+AL +L GT +
Sbjct: 294 TIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASRSSSEEALLMLQGTVI 353
Query: 336 GGQSIRLSWGRSPSNKQ----SDQAQWNG----GGYYGFAQGYEAYGYAPPTQDPNMY-Y 386
GGQ++RLSWGRSPSNKQ D QW G GYYG+ QGYEAYGYA QDPNMY Y
Sbjct: 354 GGQNVRLSWGRSPSNKQVQTPQDSNQWGGATANAGYYGYGQGYEAYGYAAQPQDPNMYGY 413
Query: 387 GGFPGYGTY 395
G + GY Y
Sbjct: 414 GAYAGYPNY 422
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 251/334 (75%), Gaps = 14/334 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+YI F TGE S K+IR+KQT +GYGF+EF SHAAAER
Sbjct: 85 DEVRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAER 144
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ + +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 145 VLQGYNGHAMPNVDLAYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYILQETFRVH 201
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T RSKGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA +K
Sbjct: 202 YPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKT- 260
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
TG Q ++ NTQG+Q +NDPNNTTIFVGGLDP+VT+D LK VF YGE++HVKIP GK
Sbjct: 261 TGVQ-ERVPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGK 319
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGGYYGF 366
RCGFVQF NR AEQAL +L GT +GGQ++RLSWGRSPSNKQ+ + +QW G+
Sbjct: 320 RCGFVQFVNRPSAEQALQMLQGTPIGGQNVRLSWGRSPSNKQAQPQQESSQWGANAGAGY 379
Query: 367 AQGYEAYGYAPPT----QDPNMY-YGGFPGYGTY 395
GY A QDPNMY YG + GY Y
Sbjct: 380 YGGYGQGYDAYGGYAQPQDPNMYGYGAYAGYPNY 413
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/340 (60%), Positives = 246/340 (72%), Gaps = 21/340 (6%)
Query: 37 HQTPVPPPVGWTPQPVPP---------PSQQTQPYG-----VAPDASSDGIRSLWIGDLQ 82
HQ PPP+ QP+PP P QT YG A + R+LWIGDLQ
Sbjct: 32 HQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTAYYGWPSVPTQAPAGPNEARTLWIGDLQ 91
Query: 83 PWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS 142
WM+E+Y+ + F TGE S K+IR+KQT +GYGFIEF S A AERVLQTFNG MP+
Sbjct: 92 YWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPN 151
Query: 143 TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
E +RLNWAT G + DDG D+TIFVGDLAADVTDY+LQETFRA Y SVKGAKVVTD
Sbjct: 152 VEMTYRLNWATAG---EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTD 208
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ T RSKGYGFV+FGD +EQ R+MTEMNG++CS+RPMRIGPAA K+ A G Q + T
Sbjct: 209 KLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT--- 265
Query: 263 TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTC 322
QG Q +NDP+N+TIFVGGLDPS T+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R+
Sbjct: 266 AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSS 325
Query: 323 AEQALSVLNGTQLGGQSIRLSWGRSPSNKQ-SDQAQWNGG 361
AE+AL +L GT + GQ++RLSWGRSPSNKQ D QW G
Sbjct: 326 AEEALLMLQGTMIEGQNVRLSWGRSPSNKQVQDFNQWGGA 365
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/335 (60%), Positives = 250/335 (74%), Gaps = 14/335 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++WIGDL WM+E+Y+ + F TGE VS KVIRNKQT SEGYGF+EF +HA AE+VLQ
Sbjct: 109 RTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQ 168
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +L ETF + Y S
Sbjct: 169 NYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPS 228
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+R MRIG AAT + +TG
Sbjct: 229 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIG-AATPRKSTGY 287
Query: 254 QYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q+Q N Q Q + D NTTIFVGGLDP+VTD+ LK F QYGE+V VKIP GK
Sbjct: 288 QHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK 347
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA----QWNGGGYYGF 366
CGFVQFA+R+ AE+AL LNGT +G Q++RLSWGR+P+NKQ ++ QW GG YYG
Sbjct: 348 GCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQW-GGAYYG- 405
Query: 367 AQGYEAYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
Q Y+ YGYA PP DP+MY YG +P YG++QQ
Sbjct: 406 GQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQ 440
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/349 (58%), Positives = 253/349 (72%), Gaps = 13/349 (3%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A+ + +R+LWIGDLQ W++E+Y++S F HTGE +S K+IRNK T EGYG
Sbjct: 7 TNPGGYHQPATLEEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYG 66
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EFVSH AAER+LQT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDL+ DV
Sbjct: 67 FVEFVSHVAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDV 126
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+LQETFRA Y SV+GAKVVTD TGRSKGYGFV+FGDE+E+ R+MTEMNGV CSTRP
Sbjct: 127 TDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCSTRP 186
Query: 239 MRIGPAATKK-AATGQQY--QKATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
MRI A KK AA QQY KA Y Q +ND NTTIFVG LDP+VT++
Sbjct: 187 MRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEE 246
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L+ +F Q+GE+V+VKIP G+ CGFVQFA R AE+A+ + G +G Q +R+SWGR +
Sbjct: 247 ELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRISWGRKQA 306
Query: 350 NKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
QW+ YYG+ QGY+AY Y TQDP++Y YG + GY Y Q
Sbjct: 307 RSTLILDQWS--AYYGYGQGYDAYAYG-ATQDPSLYAYGAYAGYPQYPQ 352
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 48 TPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
T + + P T P V P + ++++G+L P + E + IF GE V K+
Sbjct: 206 TAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEEELRPIFLQFGEIVYVKI-- 263
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
G GF++F + A+AE +Q G + +Q R++W
Sbjct: 264 ----PVGRGCGFVQFATRASAEEAIQRMQGHVI--GQQPVRISW 301
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/343 (60%), Positives = 246/343 (71%), Gaps = 24/343 (6%)
Query: 37 HQTPVPPPVGWTPQPVPP---------PSQQTQPYG-----VAPDASSDGIRSLWIGDLQ 82
HQ PPP+ QP+PP P QT YG A + R+LWIGDLQ
Sbjct: 32 HQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTAYYGWPSVPTQAPAGPNEARTLWIGDLQ 91
Query: 83 PWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS 142
WM+E+Y+ + F TGE S K+IR+KQT +GYGFIEF S A AERVLQTFNG MP+
Sbjct: 92 YWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVLQTFNGAMMPN 151
Query: 143 TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
E +RLNWAT G + DDG D+TIFVGDLAADVTDY+LQETFRA Y SVKGAKVVTD
Sbjct: 152 VEMAYRLNWATAG---EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTD 208
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ T RSKGYGFV+FGD +EQ R+MTEMNG++CS+RPMRIGPAA K+ A G Q + T
Sbjct: 209 KLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT--- 265
Query: 263 TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTC 322
QG Q +NDP+N+TIFVGGLDPS T+D+LK VF YGE+VHVKIP GKRCGFVQ+A+R+
Sbjct: 266 AQGIQTDNDPSNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSS 325
Query: 323 AEQALSVLNGTQLGGQSIRLSWGRSPSNK----QSDQAQWNGG 361
AE+AL +L GT + GQ++RLSWGRSPSNK Q D QW G
Sbjct: 326 AEEALLMLQGTMIEGQNVRLSWGRSPSNKQVQSQQDFNQWGGA 368
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/403 (60%), Positives = 285/403 (70%), Gaps = 37/403 (9%)
Query: 22 QWMAYQQQSQQQQQQH---------QTPVPPPVGWTPQPVPPPSQ-------QTQPYG-- 63
QW A QQQQ+ Q P PPP W P PP Q YG
Sbjct: 21 QWGAIPPPVPHQQQQYAPPPPQMWGQAPPPPPQMWGQAPPPPQPAYGQPPPAQAGYYGAP 80
Query: 64 ----VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
A A + +R+LWIGDLQ WM+E+YI++ F TGE S K+IR+KQT +GYGF
Sbjct: 81 PQAAPAVPAGPNEVRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGF 140
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
IEF SHA AERVLQT+NG MP+ EQ +RLNWA+ AGE+R DD PD+TIFVGDLAADVT
Sbjct: 141 IEFTSHAGAERVLQTYNGAMMPNVEQTYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVT 197
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
DY+LQETFR Y SVKGAKVVTD+ T RSKGYGFV+FGD SEQ R+MTEMNG++CS+RPM
Sbjct: 198 DYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPM 257
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
RIGPAA KK ATG Q + + QG Q ++DP+NTTIFVGGLDPSVTDD+LK VF YG
Sbjct: 258 RIGPAANKK-ATGVQEKVPS---AQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYG 313
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQ 355
++VHVKIP GKRCGFVQFANR A++AL +L GT +GGQ++RLSWGRSPSN+Q+ D
Sbjct: 314 DVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQNVRLSWGRSPSNRQAQPQQDS 373
Query: 356 AQWNGGG--YYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
QW G YYG+ QGYE YGYA P QDPNMY YG + GY Y
Sbjct: 374 NQWGGANAGYYGYGQGYEGYGYAQP-QDPNMYGYGAYAGYPNY 415
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/337 (59%), Positives = 245/337 (72%), Gaps = 21/337 (6%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAA 127
S D I++LW+GDLQ WM+E+Y+ + F GE V S K+IRNKQT EGYGF+E S A+
Sbjct: 46 SGDEIKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRAS 105
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER+LQT +GT MP++ FRLNWAT+GAG+RR + G ++IFVGDL +V D +LQETF
Sbjct: 106 AERILQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETF 165
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
++ YSSVK AKVV D TGR+KGYGFVRFGDE+E+ R+MTEMNGV C +RPMRI A K
Sbjct: 166 QSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPK 225
Query: 248 KAATGQQ-------YQKATYQNT---QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K+ QQ Y Y QG Q +NDPNNTTIFVGGLDP+ TD+ L+ VFG
Sbjct: 226 KSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNTTIFVGGLDPNATDEDLRQVFGP 285
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---- 353
+GE+V+VKIP GK CGFVQF NR+ AE+AL L+GT +G QSIRLSWGRSP+NKQ+
Sbjct: 286 FGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTIIGQQSIRLSWGRSPANKQTASWG 345
Query: 354 -----DQAQWNGGG-YYGFAQGYEAYGYAPPTQDPNM 384
D QWNGGG YY + QGYEAYGYAPP QDP M
Sbjct: 346 VQPQPDPNQWNGGGAYYSYGQGYEAYGYAPPAQDPTM 382
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/349 (61%), Positives = 261/349 (74%), Gaps = 9/349 (2%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP +Q Q + +P ++ +++LW+GDLQ WM+E Y+ S F HT E KVIRNKQT +
Sbjct: 3 PPLKQGQAH--SPGHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGY 60
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
SEGYGF+EF +H+ AE+VLQ+FNGTQMPST+ FRLNWA +G GERR D GPDF+IFVGD
Sbjct: 61 SEGYGFVEFTNHSTAEKVLQSFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGD 120
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LA DVTDY+LQETF++ YSSVKGAKVV D TT RSKGYGFVRFGDE+E++R+MTEM GV
Sbjct: 121 LAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVY 180
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILK 292
CSTRPMRI A KK+ +QN +NDP+NTT+FVGGLD SV D+ LK
Sbjct: 181 CSTRPMRISTATPKKSLA--TIPPKGFQNFGVPPLTDNDPSNTTVFVGGLDHSVKDEDLK 238
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
VF Q+G++ +VKIPAGK CGFVQF R AE+AL L+G+ +G Q+IRLSWGRSP+NKQ
Sbjct: 239 QVFSQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSPANKQ 298
Query: 353 SDQAQWN--GGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFP-GYGTYQQ 397
Q ++N G YYG+ QGYE YG+APP QDP Y YG FP YGTY Q
Sbjct: 299 QVQPEFNQWNGPYYGYGQGYECYGFAPPPQDPGAYAYGNFPQAYGTYPQ 347
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/335 (60%), Positives = 246/335 (73%), Gaps = 14/335 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+T+Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y S
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 262
Query: 254 QYQKATY----QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q Q +++ N Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP G
Sbjct: 263 QQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 322
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGF 366
K CGFVQFANR AE AL LNGT +G Q++RLSWGR+P+NKQ QW+ G YYG
Sbjct: 323 KGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWS-GAYYG- 380
Query: 367 AQGYEAYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
Q Y+ YGYA PP DP MY YG +P YG +QQ
Sbjct: 381 GQVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQ 415
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/331 (60%), Positives = 245/331 (74%), Gaps = 15/331 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+T+Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y S
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 262
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q Q +++ Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CG
Sbjct: 263 QQQYSSH-----VQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 317
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGFAQGY 370
FVQFANR AE AL LNGT +G Q++RLSWGR+P+NKQ QW+ G YYG Q Y
Sbjct: 318 FVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWS-GAYYG-GQVY 375
Query: 371 EAYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
+ YGYA PP DP MY YG +P YG +QQ
Sbjct: 376 DGYGYALPPPHDPTMYAAAYGAYPVYGNHQQ 406
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/339 (59%), Positives = 247/339 (72%), Gaps = 8/339 (2%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTG--EFVSGKVIRNKQTNFSEGYGFIEFV 123
P + IRSLWIGDLQ WM+E+Y+ + F G + S K+IRNKQT EGYGFIEF
Sbjct: 106 PAPGGEDIRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFH 165
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
S AAAE L +FNG MP+ + F+LNWA+ AG+RR DDG D TIFVGDLA+DVTD +L
Sbjct: 166 SRAAAEYALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSML 225
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
QE F+A Y SV+GA VVTDR TGRSKGYGFVRFGD +EQ R+MTEMNGV S+R +RIGP
Sbjct: 226 QEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIGP 285
Query: 244 AATKK-AATGQQYQKATY--QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
AA KK T Q Y Y Q++QG+ +NDPNNTTIFVGGLD ++ ++ L+ VF YGE
Sbjct: 286 AANKKNMGTQQTYSTNGYQSQSSQGNDVQNDPNNTTIFVGGLDSNIDENYLRQVFTPYGE 345
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---DQAQ 357
+ +VKIP GKRCGFVQF +R+CAE+A++ LNGT +GG ++RLSWGRS NKQ+ D Q
Sbjct: 346 VGYVKIPVGKRCGFVQFTSRSCAEEAINALNGTPIGGNNVRLSWGRSTQNKQAPQQDANQ 405
Query: 358 WNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQ 396
NG YYG+ QG +AY AP QDP+M G+ GYG Y+
Sbjct: 406 GNGSNYYGYQQGNDAYYGAPNAQDPSMQNYGYSGYGNYE 444
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/337 (61%), Positives = 249/337 (73%), Gaps = 16/337 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++WIGDL WM+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF++HA AE+VLQ
Sbjct: 93 KTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQ 152
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +LQETF + Y S
Sbjct: 153 NYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPS 212
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 213 VKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 271
Query: 254 QYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q Q N QG Q + D NNTTIFVGGLDP+VTD+ LK F QYGE+V VKIP GK
Sbjct: 272 QQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGK 331
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGFA 367
CGFVQFANR AE+AL LNGT +G Q++RLSWGR+P+NKQ + WN G YYG
Sbjct: 332 GCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWN-GAYYG-G 389
Query: 368 QGYEAYGYA-PPTQDPNM------YYGGFPGYGTYQQ 397
Q Y+ YGYA PP DP+M YG +P YG++QQ
Sbjct: 390 QVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQ 426
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/339 (59%), Positives = 248/339 (73%), Gaps = 20/339 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGG---- 362
RCGFVQF R AEQAL +L G +G Q++RLSWGRS SNKQ+ + QW G
Sbjct: 318 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAGV 377
Query: 363 -----YYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
YG GYA P QDPNMY YG + GY Y
Sbjct: 378 GDYYGGYGQGYEAYGSGYAQP-QDPNMYGYGAYVGYPNY 415
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/421 (52%), Positives = 273/421 (64%), Gaps = 30/421 (7%)
Query: 4 QPPSQPSDQTSQYQQQHQQ-----WMAYQQQSQQQQQQHQTPVPPPVGWTPQPVP----- 53
QP Q + QT Q QQ H+Q WMA Q + QH P+ PP + P P P
Sbjct: 9 QPQQQAAHQTEQNQQTHKQPQPQRWMAMQYPAAAMIMQH--PMMPPQHYVPPPSPHYIPY 66
Query: 54 ---PPSQQTQ--PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PP Q + S+ +++W+GDLQ WM+E+Y+ S F TGE S KVIRN
Sbjct: 67 RQYPPPHQLNGQQHQQPHQGSTSENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRN 126
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
KQT SEGYGF+EF SH AE+VLQ ++ MP+TEQ FRLNWAT+ G++R ++G D +
Sbjct: 127 KQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLS 186
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDLAADVTD VL ETF + YSSVK AKVV D TG SKGYGFVRFGD++E+ ++MTE
Sbjct: 187 IFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTE 246
Query: 229 MNGVLCSTRPMRIGPAATKKAATG--QQYQKATYQN----TQGSQGENDPNNTTIFVGGL 282
MNG+ CS+RPMRIG AAT K ++G QQY Y + + G Q + D NTTIF+GGL
Sbjct: 247 MNGIYCSSRPMRIG-AATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFTNTTIFIGGL 305
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
DP+VTD+ LK +F Q+GE+V VKIP GK CGF+QFANR AE+AL LNGT +G Q++RL
Sbjct: 306 DPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRL 365
Query: 343 SWGRSPSNKQ---SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY---YGGFPGYGTYQ 396
SWGRSP+NKQ W+G Y G G Y P P MY YG +P YGT+Q
Sbjct: 366 SWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQ 425
Query: 397 Q 397
Q
Sbjct: 426 Q 426
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/388 (54%), Positives = 261/388 (67%), Gaps = 19/388 (4%)
Query: 21 QQW--MAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQ--TQPYGVAPDASSDGIRSL 76
QQW M Y + H P P + P P P Q QP + S +++
Sbjct: 19 QQWVPMQYPAAAAMVMPHHMLP---PQHYAPPPYVPYHHQYAAQPQHQHQNGSGGENKTI 75
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
WIGDL WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SHA AE+VLQ +
Sbjct: 76 WIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYA 135
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G MP+ EQ FRLNWAT+ G++ D+ PD +IFVGDLAADVTD +L ETF +VY SVK
Sbjct: 136 GILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKA 195
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
AKVV D TGRSKGYGFVRFGD++E+ ++MT+MNGV CS+RPMRIG AAT + ++G +Q
Sbjct: 196 AKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIG-AATPRKSSG--HQ 252
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
+ N +Q E D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQ
Sbjct: 253 QGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQ 312
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGFAQGYEAY 373
FANR AE+AL LNGT +G Q++RLSWGR+P+NKQ + W G YYG A Y+ Y
Sbjct: 313 FANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWT-GAYYG-APMYDGY 370
Query: 374 GYA-PPTQDPNMY---YGGFPGYGTYQQ 397
GYA PP DP++Y YG +P YG +QQ
Sbjct: 371 GYALPPRHDPSIYAAAYGAYPLYGGHQQ 398
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/339 (61%), Positives = 246/339 (72%), Gaps = 20/339 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+ESY+ F TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 89 DEVRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 149 VLQTYNGQMMPNVELTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K
Sbjct: 206 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNT 265
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP GK
Sbjct: 266 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGK 323
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGGYYGF 366
RCGFVQF R AEQAL +L G +G Q++RLSWGRS SNKQ+ + QW G
Sbjct: 324 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQWGAAAAAGA 383
Query: 367 AQGYEAY---------GYAPPTQDPNMY-YGGFPGYGTY 395
Y Y GYA P QDPNMY YG + GY Y
Sbjct: 384 GGYYGGYGQGYEAYGSGYAQP-QDPNMYGYGAYAGYPNY 421
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/339 (59%), Positives = 248/339 (73%), Gaps = 20/339 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGG---- 362
RCGFVQF R AEQAL +L G +G Q++RLSWGRS SNKQ+ + QW G
Sbjct: 318 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQTQPQQESMQWGAGAPAGV 377
Query: 363 -----YYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTY 395
YG GYA P QDPNMY YG + GY Y
Sbjct: 378 GDYYGGYGQGYEAYGSGYAQP-QDPNMYGYGAYVGYPNY 415
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/419 (51%), Positives = 270/419 (64%), Gaps = 36/419 (8%)
Query: 7 SQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPS---------- 56
SQP + ++QQQ W+ Q + P P P+PPP
Sbjct: 8 SQPQEPNQRHQQQPHPWIPPMQYPPPPMVMPHHMMTPQHYMAP-PLPPPYMHYHHQYHHH 66
Query: 57 ----QQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
Q +QP S +++W+GDL WM+ESY+ S F GE S KVIRNKQT
Sbjct: 67 HLPIQPSQPL----KGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTG 122
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
SEGYGF+EF+SH AE+VLQ ++G MPSTEQ FRLNWAT+ G++R D+ PD +IFVG
Sbjct: 123 LSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIFVG 182
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DLAADVTD +L ETF + + SVK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNG+
Sbjct: 183 DLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGI 242
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKAT----YQN----TQGSQGENDPNNTTIFVGGLDP 284
CS+RPMRIG AAT + ++G Q Q ++ Y +QG Q E D NTTIFVGGLDP
Sbjct: 243 YCSSRPMRIG-AATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLDP 301
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSW 344
+VTD+ L+ F QYGE+V VKIP GK CGFVQFANR AE+AL LNGT +G Q++RLSW
Sbjct: 302 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSW 361
Query: 345 GRSPSNKQSDQ--AQWNGGGYYGFAQGYEAYGYAPPT-QDPNMY---YGGFPGYGTYQQ 397
GR+P+NKQ QWN G YYG Y+ YGY + DP+MY YG + YG +QQ
Sbjct: 362 GRNPANKQFRDFGNQWN-GAYYG-GHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQ 418
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/343 (58%), Positives = 245/343 (71%), Gaps = 21/343 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAAER+L
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI A KK
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGV 198
Query: 252 GQQYQ--KATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
QQY KA Y + + D NNTTIFVG LDP++T++ LK F Q+GE+ +
Sbjct: 199 QQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAY 258
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--------DQ 355
VKIPAGK CGFVQF R AE+A+ + G +G Q +R SWGR+P+ KQ D
Sbjct: 259 VKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWGQQVDP 318
Query: 356 AQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
QW+ YYG+ Y+AYGY QDP++Y YG + GY +Y Q
Sbjct: 319 NQWS--AYYGYGGTYDAYGYG-VVQDPSLYGYGAYSGYASYPQ 358
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/341 (58%), Positives = 247/341 (72%), Gaps = 13/341 (3%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ SS +++ IGDL WM+E+Y+ + F TGE S KVIR+KQT SEGYGF+EF +HA
Sbjct: 89 EGSSGDNKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHA 148
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AE+VLQ + G MP+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +LQET
Sbjct: 149 TAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQET 208
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F + Y SVK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT
Sbjct: 209 FASKYQSVKSAKVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIG-AAT 267
Query: 247 KKAATGQQYQKATYQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
+ ++G Q Q N +QG Q + D +N TIFVGGLDP+VTD+ LK F QYGE+V
Sbjct: 268 PRKSSGYQQQGGYGSNGASSQGFQSDGDSSNATIFVGGLDPNVTDEDLKQPFSQYGEIVS 327
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD---QAQWNG 360
VKIP K CGFVQFANR AE+AL LNGT +G Q++RLSWGR+P +KQ + WN
Sbjct: 328 VKIPVSKGCGFVQFANRNNAEEALQKLNGTVIGKQTVRLSWGRNPGHKQHRADFSSPWN- 386
Query: 361 GGYYGFAQGYEAYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
G YYG Q Y+ YGYA PP DP+ Y YG +P YG +QQ
Sbjct: 387 GAYYG-GQVYDGYGYALPPPHDPSTYAAAYGAYPMYGNHQQ 426
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/343 (56%), Positives = 241/343 (70%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
YSSV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+V +D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIP GK CGFVQ+A+R AE+A+ L+GT +G Q++RLSWGRSP++KQ A
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSSAV 308
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + Y QDP+ YG + GY Y Q
Sbjct: 309 WSQQADPNQWANTYYGYGYDAYGYAQDPSYAYGAYAGYSQYPQ 351
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/343 (57%), Positives = 242/343 (70%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
YSSV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+V +D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIP GK CGFVQ+A+R AE+A+ L+GT +G Q++RLSWGRSP++KQ A
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSSAV 308
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + A Y QDP+ YG + GY Y Q
Sbjct: 309 WSQQADPNQWANAYYGYGYDAYGYAQDPSYAYGAYAGYSQYPQ 351
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 245/347 (70%), Gaps = 13/347 (3%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
MRIG AA KK QQ YQ+++G+ ENDPNNTT+FVGGLD +V ++ L+ +F
Sbjct: 281 MRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFT 340
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
YGE+ +VKIP GK CGFVQF +R+CAE+A+ +LNG+Q+GGQ +RLSWGRSP N+Q+ Q
Sbjct: 341 PYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQH 400
Query: 357 ----QWNGGGYYGFAQ-GYEAYGY-APPTQDPNM-YYGGFPGYGTYQ 396
Q+NG YYG+ Q GYE YGY A QDP+M Y G+ G G Y+
Sbjct: 401 DANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/318 (66%), Positives = 250/318 (78%), Gaps = 15/318 (4%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+ +++ F TGE S K+IR+KQT +GYGFIEF SHA AERVLQT+NG MP+ E
Sbjct: 1 MDENTVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q +RLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR Y SVKGAKVVTD+
Sbjct: 61 QTYRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKM 117
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
T RSKGYGFV+FGD SEQ R+MTEMNG++CS+RPMRIGPAA KK ATG Q + + Q
Sbjct: 118 TMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKK-ATGVQEKVPS---AQ 173
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
G Q ++DP+NTTIFVGGLDPSVTDD+LK VF YG++VHVKIP GKRCGFVQFANR A+
Sbjct: 174 GVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASAD 233
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGG--YYGFAQGYEAYGYAPP 378
+AL +L GT +GGQ++RLSWGRSPSN+Q+ D QW G YYG+ QGYE YGYA P
Sbjct: 234 EALVLLQGTLIGGQNVRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQP 293
Query: 379 TQDPNMY-YGGFPGYGTY 395
QDPNMY YG + GY Y
Sbjct: 294 -QDPNMYGYGAYAGYPNY 310
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 245/347 (70%), Gaps = 13/347 (3%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
MRIG AA KK QQ YQ+++G+ ENDPNNTT+FVGGLD +V ++ L+ +F
Sbjct: 281 MRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIFT 340
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
YGE+ +VKIP GK CGFVQF +R+CAE+A+ +LNG+Q+GGQ +RLSWGRSP N+Q+ Q
Sbjct: 341 PYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSPQNRQASQH 400
Query: 357 ----QWNGGGYYGFAQ-GYEAYGY-APPTQDPNM-YYGGFPGYGTYQ 396
Q+NG YYG+ Q GYE YGY A QDP+M Y G+ G G Y+
Sbjct: 401 DANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSMQNYYGYSGCGNYE 447
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/343 (56%), Positives = 241/343 (70%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ S F HTGE S K+IRNK T+ EGYGFIEFVSH AA
Sbjct: 10 SLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAA 69
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++LQT+NGTQMP TE FRLNWA++ +GERR D G D +IFVGDLA DVTDY+LQETFR
Sbjct: 70 EKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFR 129
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AA K
Sbjct: 130 VNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRIS-AAIPK 188
Query: 249 AATGQQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+TG Q Q KA Y T Q ++DP NTTIF+G LDP+VT+D L+ + Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQ 248
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIP GK CGFVQ+A+R AE+A+ L+GT +G Q++RLSWGRSP++KQ A
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPSAV 308
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + Y QDP+ YG + GY Y Q
Sbjct: 309 WSQQADPNQWANTYYGYGYDAYGYAQDPSYAYGAYAGYSQYPQ 351
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/354 (57%), Positives = 244/354 (68%), Gaps = 20/354 (5%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A+ + +R+LWIGDLQ W +ESY+ S F HTGE VS K+IRNK T EGYG
Sbjct: 5 TAPGGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYG 64
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EFVSHAAAER+LQT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DV
Sbjct: 65 FVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDV 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TDY+LQETFR Y SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRP
Sbjct: 125 TDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRP 184
Query: 239 MRIGPAATKKAATGQQ---YQKATY------QNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
MRI A KK + QQ KA Y Q + D NTTIFVG LDP+ T++
Sbjct: 185 MRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEE 244
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L+ F Q GE+ VKIPAG+ CGFVQFA RT AE+A+ + G +G Q +R+SWG+
Sbjct: 245 DLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGKKQD 304
Query: 350 -----NKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
+Q D QWN YYG+ QGY+AY Y T DP++Y Y + GY Y Q
Sbjct: 305 LTATWGQQVD--QWN--AYYGYGQGYDAYAYG-GTHDPSLYAYNAYAGYPQYPQ 353
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/330 (59%), Positives = 242/330 (73%), Gaps = 10/330 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++WIGDL WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SHA AE+VLQ
Sbjct: 97 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 156
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+TEQ FRLNWAT+ G++ D+ PD +IFVGDLAADVTD +L ETF +VY S
Sbjct: 157 NYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 216
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++++ ++MT+MNGV CS+RPMRIG AAT + ++G
Sbjct: 217 VKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIG-AATPRKSSG- 274
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+Q+ N +Q E D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CG
Sbjct: 275 -HQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 333
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN--GGGYYGFAQGYE 371
FVQFANR AE+AL LNGT +G Q++RLSWGR+P+NKQ N G YYG A Y+
Sbjct: 334 FVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYG-APMYD 392
Query: 372 AYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
YGYA P DP++Y YG +P YG +QQ
Sbjct: 393 GYGYALTPRHDPSIYAAAYGAYPLYGGHQQ 422
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/351 (56%), Positives = 246/351 (70%), Gaps = 22/351 (6%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 132 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 191
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+ EQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 192 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 251
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 252 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 311
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + QQY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 312 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQ 371
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SD 354
+GE+V VKIPAGK CGFVQF++R+ A++A+ L+G +G Q++RLSWGRSP+NKQ
Sbjct: 372 FGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADS 431
Query: 355 QAQWNGGGYYGFAQGYEAYGY-APPTQDPNMYYGGFP------GYGTYQQP 398
+QWNGG Y Q Y YGY A QD MY G GYG +QQP
Sbjct: 432 GSQWNGG--YNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNGYGNHQQP 480
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/351 (55%), Positives = 248/351 (70%), Gaps = 16/351 (4%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+TEQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 138 AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + +QY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 258 KPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQ 317
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SD 354
+GE+V VKIPAGK CGFVQF++R+ A++A+ L+G +G Q++RLSWGRSP+NKQ
Sbjct: 318 FGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDS 377
Query: 355 QAQWNGGGYYGFAQGYEAYGY-APPTQDPNMYYGGFPGYGTYQQPGSYQQP 404
+QWNGG Y Q Y YGY A QD MY G + + G++QQP
Sbjct: 378 GSQWNGG--YNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQP 426
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/384 (53%), Positives = 257/384 (66%), Gaps = 25/384 (6%)
Query: 34 QQQHQTPVPP---PVGWTP-QPVPPPSQQTQPYGVAPDASS------DGIRSLWIGDLQP 83
Q H P PP P + P V PP Q+ P VA + + + +S+W+GDL
Sbjct: 56 QPHHMAPPPPQFAPTHFVPFHAVAPPRAQSVPAAVALGSPAPHQPGQEENKSVWVGDLHY 115
Query: 84 WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F+G MP+T
Sbjct: 116 WMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNT 175
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 176 DQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDA 235
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT 263
TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++ + ++
Sbjct: 236 NTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSD 295
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CGFVQFA R A
Sbjct: 296 GG-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNA 350
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQAQWNGGG-YYGFAQGYEAYGY--AP 377
E AL LNG+ +G Q++RLSWGR+P+NKQ + QWN GG YY Y YGY A
Sbjct: 351 EDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAA 410
Query: 378 PTQDPNMY----YGGFPGYGTYQQ 397
P DP MY YG +P YG QQ
Sbjct: 411 PFPDPGMYAAPAYGAYPFYGNQQQ 434
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/281 (67%), Positives = 219/281 (77%), Gaps = 14/281 (4%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFV 279
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNNTT+FV
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNNTTVFV 265
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
GGLD SVTDD LK VF QYGE+VHVKIPAGKRCGFVQF+ +
Sbjct: 266 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F A + AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 63 TLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
N + P Q + + + +D + TIFVG L VT
Sbjct: 122 TFNNAPIPSFP--------------DQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVT 167
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
D IL F Y + K+ + G FV+F++ + +A++ +NG + +
Sbjct: 168 DYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPM 227
Query: 341 RL 342
R+
Sbjct: 228 RI 229
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSV 329
T+++G L + ++ L F GE+V K+ K+ G F++FA+ AE+ L
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 122
Query: 330 LNGTQLGG---QSIRLSWGRSPSNKQSDQA 356
N + Q RL+W S + D +
Sbjct: 123 FNNAPIPSFPDQLFRLNWASLSSGDKRDDS 152
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 238/348 (68%), Gaps = 26/348 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY+ S F HTGE +S K+IRNK T EGYGF+EFVSHAAAER+L
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TEQ FRLNWA++G GERR D GP+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNG CSTRPMRI A KK
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRISAATPKKPLVF 198
Query: 253 QQYQKATYQNTQGSQ--------------GENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
S + D NNTTIFVG LDP++T++ LK F Q+
Sbjct: 199 SSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQF 258
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----- 353
GE+ +VKIPAGK CGFVQF R AE+A+ + G +G Q +R SWGR+P+ KQ
Sbjct: 259 GEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLTTWG 318
Query: 354 ---DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
D QW+ YYG+ Y+AYGY QDP++Y YG + GY +Y Q
Sbjct: 319 QQVDPNQWS--AYYGYGGTYDAYGYG-VVQDPSLYGYGAYSGYASYPQ 363
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/325 (60%), Positives = 239/325 (73%), Gaps = 17/325 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+E+Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 89 DEVRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD P++TIFVGDLAADVTDY+LQETFR
Sbjct: 149 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPEYTIFVGDLAADVTDYLLQETFRVH 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K
Sbjct: 206 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNT 265
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D LK VF YGE+VHVKIP GK
Sbjct: 266 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGK 323
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----DQAQWNGGGYYGF 366
RCGFVQF R AEQAL +L G +G Q++RLSWGRS SNKQ+ + QW G
Sbjct: 324 RCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWGRSLSNKQAQPQQESNQWGAAAGAGG 383
Query: 367 AQGYEAY-------GYAPPTQDPNM 384
G GYA P QDPNM
Sbjct: 384 YYGGYGQGYEAYGSGYAQP-QDPNM 407
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/383 (55%), Positives = 255/383 (66%), Gaps = 13/383 (3%)
Query: 23 WMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPD-ASSDGIRSLWIGDL 81
WM Q + QH +PP PQP Q Q A SS +++W+GDL
Sbjct: 29 WMPMQYPAAAMVMQHHM-MPPQHYAPPQPYMAYHQYQQQVPQAHHLGSSAENKTVWVGDL 87
Query: 82 QPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP 141
WM+E+Y+ F TGE S KVIRNKQT SEGYGF+EF SH A++VLQ + G MP
Sbjct: 88 HHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMP 147
Query: 142 STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+TEQ FRLNWAT+ G++R D+ PD +IFVGDLAADVTD +L ETF Y SVK AKVV
Sbjct: 148 NTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVF 207
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT + +G YQ+ +
Sbjct: 208 DANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKTSG--YQQGSQS 264
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
N SQ E D NTTIFVGGLDP+VT + LK F QYGE+V VKIP GK CGFVQFANR
Sbjct: 265 NGTSSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRN 324
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQAQWNGGGYYGFAQGYEAYGYA-PP 378
AE+AL LNGT +G Q +RLSWGRSP+NKQ +D G YYG Y+ YGYA PP
Sbjct: 325 NAEEALQKLNGTTIGKQMVRLSWGRSPANKQFRADFGNAWSGAYYG-GPVYDGYGYALPP 383
Query: 379 TQDPNM----YYGGFPGYGTYQQ 397
DP++ YG +P YG YQQ
Sbjct: 384 PYDPSIYAAAAYGAYPIYGGYQQ 406
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 239/339 (70%), Gaps = 18/339 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E Y++ FGHTGE +S K+IRNK T EGYGF+EFVSHAAAERVL
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP+T+Q FRLNWA++G GERR D P+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD T RSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AAT K TG
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRIS-AATPKKTTG 191
Query: 253 QQYQKA-------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A T Q + D NNTTIFVG LD +V+++ LK Q+G
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
E+V VKI GK GFVQF R AE+A+ + G +G Q +R+SWGR+ + +Q D QW+
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQMDPNQWS 311
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
YYG+ QGYEAY Y P DP++Y YG +PGY Y Q
Sbjct: 312 --AYYGYGQGYEAYAYG-PAHDPSLYAYGAYPGYAQYPQ 347
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/307 (58%), Positives = 230/307 (74%), Gaps = 10/307 (3%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SS+ +++WIGDLQ WM+E+Y+ S F H GE +S K+IRNKQT SE YGF+EF +HAAA
Sbjct: 28 SSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAA 87
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ++NGT MP+ EQ FRLNWA + AGE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 88 EKVLQSYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFA 147
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + SVKGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNG+ CS+RPMR+G A KK
Sbjct: 148 SRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKK 207
Query: 249 AATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+ QQ+ + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q+
Sbjct: 208 PSAQQQFSSQAVILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQF 267
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
GE+V VKIPAGK CGFVQF++R+ A++A+ L+G +G Q++RLSWGRSP+NKQ
Sbjct: 268 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSG 327
Query: 359 NGGGYYG 365
NGGGYYG
Sbjct: 328 NGGGYYG 334
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/338 (55%), Positives = 235/338 (69%), Gaps = 13/338 (3%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK TN EGYGFIEF+SH AAE+VL
Sbjct: 16 VRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NG QMP +E FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 76 QTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI A KK++
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGS 195
Query: 253 Q--------QYQKATYQ--NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Y A Y Q + ++D NTTIF+G LDP+ T++ L+ + Q+GEL+
Sbjct: 196 QLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEEELRQLCVQFGELI 255
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN--- 359
+VKIP GK CGFVQ+A+R AE+A+ L+GT +G Q +RLSWGRSP+NKQ A W
Sbjct: 256 YVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPANKQDQSAAWTQQA 315
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
+ A Y QDP+ YG + GY Y Q
Sbjct: 316 DPNQWTGAYYGYGYDPYGYAQDPSYAYGAYAGYSQYPQ 353
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 237/331 (71%), Gaps = 13/331 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL
Sbjct: 153 KTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 212
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF + YSS
Sbjct: 213 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYSS 272
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CSTRPMRIGPA +K++
Sbjct: 273 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKSSGTS 332
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ ++ + D NTT+FVGGLDP+V++D LK F QYGE+ VKIP GK+CG
Sbjct: 333 GSTGSS------ARSDGDLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCG 386
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQA-QWNGGGYYGFAQGY 370
FVQF R AE AL LNG+ +G Q++RLSWGR+P+NKQ SD QWN G YY + Y
Sbjct: 387 FVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGNQWNNGMYYAPSPFY 446
Query: 371 EAYGY-APPTQDPNMY---YGGFPGYGTYQQ 397
YGY A P DP MY YG +P YG QQ
Sbjct: 447 NGYGYPAAPFPDPGMYAAAYGAYPLYGNQQQ 477
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 238/331 (71%), Gaps = 14/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y+SVKGAKVV D +GRSKGYGFVRFGDE+E+ R+MTEMNG+ CS+RPMRIG A KK
Sbjct: 215 SRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKK 274
Query: 249 AATGQQ-YQKATY---------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
A+ QQ Y QGSQ +++ NNTTIFVGGLD V+D+ LK F ++
Sbjct: 275 ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKF 334
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQ 355
G++V VKIP GK CGFVQFANR AE A+ LNGT +G Q++RLSWGRS NKQ
Sbjct: 335 GDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSN 394
Query: 356 AQWNGGGYYGFAQGYEAYGYAPP-TQDPNMY 385
QWNGG Y G + G Y+ P QDPNM+
Sbjct: 395 NQWNGGRYGGQSYGGYGGYYSVPQHQDPNMH 425
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 236/331 (71%), Gaps = 13/331 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSS
Sbjct: 79 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 138
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K +
Sbjct: 139 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS--- 195
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 196 ---GTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCG 252
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQ-AQWNGGGYYGFAQGY 370
FVQF R AE AL LNG+ +G Q++RLSWGR+P+NKQ SD +QWN G YY + Y
Sbjct: 253 FVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFY 312
Query: 371 EAYGY-APPTQDPNMY---YGGFPGYGTYQQ 397
YGY AP DP MY YG +P YG QQ
Sbjct: 313 SGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 343
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/332 (57%), Positives = 236/332 (71%), Gaps = 14/332 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL
Sbjct: 104 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 164 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDATLLEIFSSRYSS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CSTRPMRIGPA +K++
Sbjct: 224 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSTRPMRIGPATPRKSSGNS 283
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 284 GSTGSS------ARSDGDLTNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCG 337
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQA-QWNGGGYYGFAQGY 370
FVQF R AE AL LNG+ +G Q++RLSWGR+P+NKQ SD QWN G YY + Y
Sbjct: 338 FVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGNQWNNGMYYAASPFY 397
Query: 371 EAYGY-APPTQDPNMY----YGGFPGYGTYQQ 397
YGY A P DP MY YG +P YG QQ
Sbjct: 398 NGYGYPAAPFPDPGMYTAAAYGAYPFYGNQQQ 429
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/331 (58%), Positives = 233/331 (70%), Gaps = 12/331 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++LWIGDL WM+ESY+ F TGE S KVIRNK + SEGYGF EF SHA AE+VLQ
Sbjct: 97 KTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQ 156
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ G MP+ +Q FRLNWAT+ G++ D+ D +IFVGDLAADVTD VL ETF + Y S
Sbjct: 157 NYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPS 216
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGDESE+ ++MT+MNGV CS+RPMRIG AAT + ++G
Sbjct: 217 VKAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIG-AATPRKSSGH 275
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q T N SQ E D NTTIFVGGLD +VTD+ LK F QYGE+ VKIP GK CG
Sbjct: 276 QPGGQT--NGTSSQSEADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCG 333
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQAQWNGGGYYGFAQGYE 371
FVQFANR AE+AL LNGT +G Q++RLSWGR+P+ KQ D W G Y + Y+
Sbjct: 334 FVQFANRNNAEEALQKLNGTMIGKQTVRLSWGRNPAYKQFRLDVGSW--AGPYFPSPIYD 391
Query: 372 AYGYAPPT--QDPNMY---YGGFPGYGTYQQ 397
YGYA P+ DP+MY YGG+P YG + Q
Sbjct: 392 GYGYAMPSPHHDPSMYPLAYGGYPIYGGHSQ 422
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 262/422 (62%), Gaps = 44/422 (10%)
Query: 7 SQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYG--- 63
S+P++Q+S + Q Q++ H PPP W P PP + P+
Sbjct: 9 SKPTEQSSNNRPQ--------QKTPPPPSPHSLTFPPPQQWVPMQYPP-AAMVMPHHMLP 59
Query: 64 -----------------------VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
V +S+ ++LW+GDL WM+E+Y+ F TGE
Sbjct: 60 PQHYPPPPHHYMAYHHYLHHVPHVHHGSSAADNKTLWVGDLHHWMDENYLHRCFASTGEI 119
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE-R 159
S KVIRNKQT +EGYGF+EF SH AE+VLQT+ G MP+TEQ FRLNWAT+ G+ +
Sbjct: 120 FSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQTYAGMLMPNTEQPFRLNWATFSTGDHK 179
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
R D+ PD +IFVGDLAADVTD +L ETF Y SVK AKVV D TGRSKGYGFVRFGD+
Sbjct: 180 RSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDD 239
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
E+ +++ EMNGV CS+R MRIG AAT + ++G YQ+ N SQ + D NTTIFV
Sbjct: 240 GERSKALNEMNGVFCSSRAMRIG-AATPRKSSG--YQQGGQSNGTPSQSDTDSTNTTIFV 296
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
GGLDPS T + L+ F QYGE+V VKIP GK CGFVQFANR AE+AL LNGT +G Q+
Sbjct: 297 GGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQT 356
Query: 340 IRLSWGRSPSNKQSDQ---AQWNGGGYYGFAQGYEAYGYA-PPTQDPNMYYGGFPGYGTY 395
+RLSWGR+P+NKQ + WNG YYG Y+ YGYA P D +MY +P YG +
Sbjct: 357 VRLSWGRNPANKQFRSEFGSPWNGPAYYG-GPAYDGYGYAMPHPYDQSMYAAAYPMYGGH 415
Query: 396 QQ 397
QQ
Sbjct: 416 QQ 417
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 236/331 (71%), Gaps = 13/331 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 115 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 174
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T+Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSS
Sbjct: 175 GFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSS 234
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K +
Sbjct: 235 VKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS--- 291
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CG
Sbjct: 292 ---GTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCG 348
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQ-AQWNGGGYYGFAQGY 370
FVQF R AE AL LNG+ +G Q++RLSWGR+P+NKQ SD +QWN G YY + Y
Sbjct: 349 FVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFY 408
Query: 371 EAYGY-APPTQDPNMY---YGGFPGYGTYQQ 397
YGY AP DP MY YG +P YG QQ
Sbjct: 409 SGYGYPAPFPADPGMYAAAYGAYPFYGNQQQ 439
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQAL 327
N TI+VG L + ++ L + FG GE+V +K+ K+ GFV+F + AE+ L
Sbjct: 114 NKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVL 173
Query: 328 SVLNGTQL--GGQSIRLSWGR-SPSNKQSDQA 356
G + Q R++W S +++SD A
Sbjct: 174 EGFAGHIMPNTDQPFRINWASFSMGDRRSDIA 205
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 237/343 (69%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 71 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 130
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 131 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 189
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 190 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 249
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIPA K CGFVQ+A+R AE+A+ L+GT +G Q +RLSWGRSP++KQ A
Sbjct: 250 FGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAV 309
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + A Y QDP+ Y + GY Y Q
Sbjct: 310 WSQQADPNQWASAYYGYGYDAYGYAQDPSYAYNSYAGYTQYPQ 352
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 237/343 (69%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 71 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 130
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 131 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 189
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 190 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 249
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIPA K CGFVQ+A+R AE+A+ L+GT +G Q +RLSWGRSP++KQ A
Sbjct: 250 FGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAV 309
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + A Y QDP+ Y + GY Y Q
Sbjct: 310 WSQQADPNQWASAYYGYGYDAYGYAQDPSYAYNSYAGYTQYPQ 352
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 237/343 (69%), Gaps = 15/343 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S + +R+LWIGDLQ W +E+Y+ + F HTGE S K+IRNK T+ EGYGFIEF+SH A
Sbjct: 33 SLEEVRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVA 92
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQT+NGTQMP TE FRLNWA++ +GERR D GPD +IFVGDLA DVTDY+LQETFR
Sbjct: 93 EKVLQTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 152
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFV+F DE+E+ R+MTEMNG+ CSTRPMRI AA K
Sbjct: 153 VSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRIS-AAIPK 211
Query: 249 AATGQQYQ----KATY-------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
TG Q Q KA Y Q ++DP NTTIF+G LD +VT+D L+ + Q
Sbjct: 212 KTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQ 271
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+GEL++VKIPA K CGFVQ+A+R AE+A+ L+GT +G Q +RLSWGRSP++KQ A
Sbjct: 272 FGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSAV 331
Query: 358 WN---GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ 397
W+ + A Y QDP+ Y + GY Y Q
Sbjct: 332 WSQQADPNQWASAYYGYGYDAYGYAQDPSYAYNSYAGYTQYPQ 374
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/320 (60%), Positives = 229/320 (71%), Gaps = 19/320 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D IR++W+GDL WM+E+Y+ + F HTGE VS KVIRNKQT SEGYGF+EF S A AE+
Sbjct: 98 DEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEK 157
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-PDFTIFVGDLAADVTDYVLQETFRA 189
VLQ +NGT MP+T+Q FRLNWAT+ AGERR D D +IFVGDLA DVTD +LQETF
Sbjct: 158 VLQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAG 217
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
YSS+KGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNGV CS+RPMRIG A KK
Sbjct: 218 RYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKT 277
Query: 250 -ATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
QQY A QGS E D NNTTIFVGGLD +D+ L+ F Q+
Sbjct: 278 YGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQF 337
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQA 356
GE+V VKIP GK CGFVQFA+R AE+A+ LNGT +G Q++RLSWGRSP NK +SD
Sbjct: 338 GEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSPGNKHWRSD-- 395
Query: 357 QWNGGGYYGFAQGYEAYGYA 376
+ GGY+G Q Y +G+A
Sbjct: 396 --SNGGYFG-GQSYGGHGFA 412
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 231/331 (69%), Gaps = 15/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D I++LW+GDL WM+++Y+ + FGHTGE S K+IRNKQT SEGYGF+EF S A A
Sbjct: 4 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E++L ++NGT MP+TEQ FRLNWAT+ G+RR D G D +IFVGDLA+DVTD +LQETF
Sbjct: 64 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 123
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNG+ CS+RPMRIG A KK
Sbjct: 124 TRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKK 183
Query: 249 AATGQQY-----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
A+ QQ + QGSQ D NTTIFVGGLD VTD+ L+ F Q
Sbjct: 184 ASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQ 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SD 354
+GE+V VKIP GK CGFVQFANR AE AL LNGT +G Q++RLSWGR+P++KQ
Sbjct: 244 FGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRNDS 303
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
QWNG Y G G P DPNMY
Sbjct: 304 NNQWNGAYYGGQGYGGGYGYAMPQ-NDPNMY 333
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 237/324 (73%), Gaps = 14/324 (4%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S F TGE S KVIRNKQT SEGYGF+EF SHAAAE+VLQ + G MP+T+
Sbjct: 1 MDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWAT+ G++R D+GPD +IFVGDLA+DV+D +L ETF Y SVK AKVV D
Sbjct: 61 QPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY---- 260
TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+RPMRIG AAT + ++G Q Q +++
Sbjct: 121 TGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSHGGYA 179
Query: 261 QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
N Q + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQFANR
Sbjct: 180 SNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 239
Query: 321 TCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGFAQGYEAYGYA- 376
AE AL LNGT +G Q++RLSWGR+P+NKQ QW+ G YYG Q Y+ YGYA
Sbjct: 240 NNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWS-GAYYG-GQVYDGYGYAL 297
Query: 377 PPTQDPNMY---YGGFPGYGTYQQ 397
PP DP MY YG +P YG +QQ
Sbjct: 298 PPPHDPTMYAAAYGAYPVYGNHQQ 321
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE VS K+ K G GF++F + AE LQ
Sbjct: 195 TIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK------GCGFVQFANRNNAEDALQK 248
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGT + +Q RL+W A ++ + D
Sbjct: 249 LNGTVI--GKQTVRLSWGRNPANKQMRAD 275
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 238/334 (71%), Gaps = 15/334 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+S+W+GDL WM+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+
Sbjct: 103 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 162
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 163 GFSGHIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSS 222
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++
Sbjct: 223 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTS 282
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ ++ G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CG
Sbjct: 283 GSNGSAARSDGG-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCG 337
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQAQWNGGG-YYGFAQG 369
FVQFA R AE AL LNG+ +G Q++RLSWGR+P+NKQ + QWN GG YY
Sbjct: 338 FVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPF 397
Query: 370 YEAYGY--APPTQDPNMY----YGGFPGYGTYQQ 397
Y YGY A P DP MY YG +P YG QQ
Sbjct: 398 YNGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 431
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/329 (57%), Positives = 234/329 (71%), Gaps = 24/329 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W +E+Y+ F HTGE S K+IRNK + EGYGFIEF+SH AAE+VL
Sbjct: 16 VRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
Q +NG QMP TE FRLNWA++ +GE+R D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 76 QAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD TGRSKGYGFV+F DE+E+ R+M+EMNGV CSTRPMRI AA K ++G
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRIS-AAIPKKSSG 194
Query: 253 QQYQ----KATYQNT-------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
Q Q KA Y T Q ++D NTTIF+G LDP+VT++ L+ + Q+GEL
Sbjct: 195 SQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQICVQFGEL 254
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN-- 359
++VKIP GK CGFVQ+A+R AE+A+ L+GT +G Q +RLSWGRSP+NKQ A W
Sbjct: 255 IYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQSAAWGQQ 314
Query: 360 -----GGGYYGFAQGYEAYGYAPPTQDPN 383
YY + GY+ YGY QDP+
Sbjct: 315 ADPNQWSAYYSY--GYDPYGYP---QDPS 338
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/409 (50%), Positives = 254/409 (62%), Gaps = 42/409 (10%)
Query: 17 QQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY--------GVAPDA 68
Q QQWMA QQ PP Q QQ PY
Sbjct: 26 QHYQQQWMAMQQ------------YPPAAAMVMQQQMMYGQQYMPYYHQQQQHMIQIQQN 73
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ R++WIGDLQ WM+E Y+ + F GE +S KVIRNKQT SE YGFIEF +H AA
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD------DGPDFTIFVGDLAADVTDYV 182
E+VLQ++NGT MP+ EQ FRLNW+ + GE+R D G D +IFVGDLA+DVTD +
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTM 193
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L++TF + Y SVKGAKVV D TGRSKGYGFVRF DESE+ R+MTEMNG+ CS+R MRIG
Sbjct: 194 LRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIG 253
Query: 243 PAATKKAATGQQY-----QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
A KK + QQY + TQ SQ ++D +NTT+FVGGLD VTD+ L+ F Q
Sbjct: 254 VATPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQ 313
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SD 354
+G +V VKIPAGK CGFVQF+ R+ AE A+ LNGT +G Q++RLSWGR+P+NKQ
Sbjct: 314 FGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQFRTDS 373
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFP------GYGTYQQ 397
+QWNGG YYG Q Y YGY +MY G GYG ++Q
Sbjct: 374 GSQWNGG-YYG-RQNYGGYGYGASQSQDSMYGAGAAHGASSNGYGNHEQ 420
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 232/326 (71%), Gaps = 16/326 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ S F HTGE S KVIRNKQT EGYGFIEF SHA AE+VLQ
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NG+ MP+ +Q FRLNWA++ AGERR + G D +IFVGDLAADVTD +LQETF + Y S
Sbjct: 166 NYNGSMMPNADQPFRLNWASF-AGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLS 224
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-ATG 252
VKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNGV CS+RPMRIG A KK+ A
Sbjct: 225 VKGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQ 284
Query: 253 QQYQKATY----------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
QQY QGSQ + D NNTTIFVGG+D ++D+ L+ F Q+GE+V
Sbjct: 285 QQYSSQALVLAGGHAPNGSMAQGSQSDGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVV 344
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQAQWN 359
VKIPAGK CGFVQFA+R AE AL LNGT +G Q++RLSWGRSP+NKQ QWN
Sbjct: 345 SVKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGKQTVRLSWGRSPANKQWRGDHNNQWN 404
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNMY 385
G + G G Y A P QD NMY
Sbjct: 405 GAYFGGQGYGGYGYAMA-PNQDQNMY 429
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/333 (57%), Positives = 231/333 (69%), Gaps = 17/333 (5%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEF--VSGKVIRNKQTNFSEGYGFIEFVSHA 126
S+D I++LW+GDL WM+++Y+ + FGHTGE S K+IRNKQT SEGYGF+EF S A
Sbjct: 76 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AE++L ++NGT MP+TEQ FRLNWAT+ G+RR D G D +IFVGDLA+DVTD +LQET
Sbjct: 136 TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 195
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+M EMNG+ CS+RPMRIG A
Sbjct: 196 FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 255
Query: 247 KKAATGQQY-----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
KKA+ QQ + QGSQ D NTTIFVGGLD VTD+ L+ F
Sbjct: 256 KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 315
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--- 352
Q+GE+V VKIP GK CGFVQFANR AE AL LNGT +G Q++RLSWGR+P++KQ
Sbjct: 316 SQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQWRN 375
Query: 353 SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
QWNG Y G G P DPNMY
Sbjct: 376 DSNNQWNGAYYGGQGYGGGYGYAMPQ-NDPNMY 407
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 239/348 (68%), Gaps = 27/348 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E Y++ FGHTGE +S K+IRNK T EGYGF+EFVSHAAAERVL
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP+T+Q FRLNWA++G GERR D P+ +IFVGDLA DVTDY+LQETFRA Y
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD T RSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI AAT K TG
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRIS-AATPKKTTG 191
Query: 253 QQYQKA-------------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A T Q + D NNTTIFVG LD +V+++ LK Q+G
Sbjct: 192 AYAAPAAPVPKPVYPVPAYTSPVVQVQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFG 251
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS------ 353
E+V VKI GK GFVQF R AE+A+ + G +G Q +R+SWGR+ + +Q
Sbjct: 252 EIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLTARQDLPGGWG 311
Query: 354 ---DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
D QW+ YYG+ QGYEAY Y P DP++Y YG +PGY Y Q
Sbjct: 312 PQMDPNQWS--AYYGYGQGYEAYAYG-PAHDPSLYAYGAYPGYAQYPQ 356
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 236/331 (71%), Gaps = 16/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S++ +++W+GDL WM+E+Y+ + F HTGE S K+IRNKQT EGYGF+EF SHAAA
Sbjct: 75 SNEEAKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAA 134
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ+++G+ MP+T+Q FRLNWA++ AGERR D G D +IFVGDLAADVTD +LQETF
Sbjct: 135 EKVLQSYSGSMMPNTDQPFRLNWASF-AGERRADAGSDLSIFVGDLAADVTDAMLQETFA 193
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+SVKGAKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS+RPMRIG A KK
Sbjct: 194 TKYASVKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPKK 253
Query: 249 -AATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+A QQY + QGSQ + D NNTTIFVGG+D VTD+ L+ F Q
Sbjct: 254 PSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQ 313
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQ 355
+GE+V VK+P GK C FVQFANR AE AL LNGT +G Q++RLSWGR+P+NKQ D
Sbjct: 314 FGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGDH 373
Query: 356 A-QWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
QW+G + G Y PP QDP MY
Sbjct: 374 GNQWHGAYFGGQGYAGYGYAM-PPNQDPGMY 403
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/352 (55%), Positives = 245/352 (69%), Gaps = 24/352 (6%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
+SS+ +++WIGDLQ WM+ESY+ S F GE +S K+IRNKQT SE YGF+EF +HAA
Sbjct: 78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AE+VLQ++NGT MP+ EQ FRLNWA + GE+R + G DF+IFVGDLA+DVTD +L++TF
Sbjct: 138 AEKVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTF 197
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S+KGAKVV D TG SKGYGFVRFGDESE+ R+MTEMNGV CS+R MRIG A K
Sbjct: 198 ASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPK 257
Query: 248 KAATGQQYQK----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + QQY + T GSQ + D +NTTIFVGGLD VTD+ L+ F Q
Sbjct: 258 KPSAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQ 317
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SD 354
+GE+V VKIPAGK CGFVQF++R+ A++A+ L+G +G Q++RLSWGR+ +NKQ
Sbjct: 318 FGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRT-ANKQMRADS 376
Query: 355 QAQWNGGGYYGFAQGYEAYGY-APPTQDPNMYYGGFP-------GYGTYQQP 398
+QWNGG Y Q Y YGY A QD MY G GYG +QQP
Sbjct: 377 GSQWNGG--YNGRQNYGGYGYGASQNQDSGMYATGAAAYGASSNGYGNHQQP 426
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 232/322 (72%), Gaps = 10/322 (3%)
Query: 73 IRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYGFIEF S AAAE
Sbjct: 145 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 204
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L FNG MP+ E F+LNWA+ G++R D+G D IFVGDLA DVTD +L++ FRA
Sbjct: 205 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 264
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SV+GAKVV DR TGR KGYGFV FGD +EQ R+MTEMNG++ STR MRIG AA+KK
Sbjct: 265 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNT 324
Query: 251 TGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
QQ YQ++QG+ ENDPNNTT+FVGGLD +V ++ L+ +F YGE+ +VKIP
Sbjct: 325 DAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 384
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ----AQWNGGGYY 364
GK CGFVQF +R+CAE+A+ +LNG+Q+GGQ RLSWGRS N+Q+ Q +Q+NG YY
Sbjct: 385 GKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNNYY 444
Query: 365 GFAQ-GYEAYGY-APPTQDPNM 384
+ Q G E Y Y AP QDP++
Sbjct: 445 RYQQPGNEGYSYGAPNAQDPSI 466
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 232/322 (72%), Gaps = 10/322 (3%)
Query: 73 IRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYGFIEF S AAAE
Sbjct: 114 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 173
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L FNG MP+ E F+LNWA+ G++R D+G D IFVGDLA DVTD +L++ FRA
Sbjct: 174 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 233
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SV+GAKVV DR TGR KGYGFV FGD +EQ R+MTEMNG++ STR MRIG AA+KK
Sbjct: 234 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAASKKNT 293
Query: 251 TGQQ--YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
QQ YQ++QG+ ENDPNNTT+FVGGLD +V ++ L+ +F YGE+ +VKIP
Sbjct: 294 DAQQTYATNGAYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPV 353
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ----AQWNGGGYY 364
GK CGFVQF +R+CAE+A+ +LNG+Q+GGQ RLSWGRS N+Q+ Q +Q+NG YY
Sbjct: 354 GKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWGRSTQNRQASQHDANSQYNGNNYY 413
Query: 365 GFAQ-GYEAYGY-APPTQDPNM 384
+ Q G E Y Y AP QDP++
Sbjct: 414 RYQQPGNEGYSYGAPNAQDPSI 435
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 216/297 (72%), Gaps = 12/297 (4%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASSD IR++W+GDL WM+E+Y+ + F HTGE VS KVIRNKQT SEGYGF+EF S
Sbjct: 94 ASSDEIRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGT 153
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-PDFTIFVGDLAADVTDYVLQET 186
AE+VLQ +NGT MP+T+Q FRLNWAT+ AGERR D D +IFVGDLA DVTD +LQ+T
Sbjct: 154 AEKVLQNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDT 213
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F YSS+KGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNGV CS+RPMRIG A
Sbjct: 214 FAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATP 273
Query: 247 KKA-ATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
KK QQY A QGS E D NNTTIFVGGLD +D+ L+ F
Sbjct: 274 KKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPF 333
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
Q+GE+V VKIP GK CGFVQFA+R AE+A+ LNGT +G Q++RLSWGRSP NK
Sbjct: 334 LQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 390
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/356 (54%), Positives = 242/356 (67%), Gaps = 28/356 (7%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+AS D R++WIGDLQ WM+E Y+ + F GE +S KVIRNKQT SE YGFIEF +H
Sbjct: 73 NASEDN-RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHE 131
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD------DGPDFTIFVGDLAADVTD 180
AAE+VLQ++NGT MP+ EQ FRLNW+ + +GE+R D G D +IFVGDLA+DVTD
Sbjct: 132 AAEKVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTD 191
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
+L++TF + Y SVKGAKVV D TGRSKGYGFVRF DESE+ R+MTEMNG+ CS+R MR
Sbjct: 192 TMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMR 251
Query: 241 IGPAATKKAATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
IG A KK + QQY + TQ SQ ++D +NTT+FVGGLD VTD+
Sbjct: 252 IGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEE 311
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L+ F Q+G +V VKIPAGK CGFVQF+ R+ AE A+ LNGT +G Q++RLSWGR+P+N
Sbjct: 312 LRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPAN 371
Query: 351 KQ---SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFP------GYGTYQQ 397
KQ +QWNGG YYG Q Y YGY +MY G GYG ++Q
Sbjct: 372 KQFRTDSGSQWNGG-YYG-RQNYGGYGYGASQSQDSMYGAGAAHGASSNGYGNHEQ 425
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/336 (56%), Positives = 235/336 (69%), Gaps = 17/336 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+
Sbjct: 92 KTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLE 151
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 152 GFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSS 211
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++
Sbjct: 212 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTS 271
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ + G D NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CG
Sbjct: 272 GSNGSSARPDGG-----DLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCG 326
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ----SDQAQW-NGGGYYG--- 365
FVQFA R AE AL LNG+ +G Q++RLSWGR+P+NKQ + QW NGG YY
Sbjct: 327 FVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPP 386
Query: 366 FAQGYEAYGYAPPTQDPNMY----YGGFPGYGTYQQ 397
F G Y A P DP MY YG +P YG QQ
Sbjct: 387 FYNGGYGYPAAAPFPDPGMYAAPAYGAYPFYGNQQQ 422
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/331 (58%), Positives = 236/331 (71%), Gaps = 15/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y+SVKGAKVV D +G SKGYGF RFGDE+E+ R+MTEMNG+ CS+RPMRIG A KK
Sbjct: 215 SRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGVATPKK 273
Query: 249 AATGQQ-YQKATY---------QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
A+ QQ Y QGSQ +++ NNTTIFVGGLD V+D+ LK F ++
Sbjct: 274 ASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKF 333
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQ 355
G++V VKIP GK CGFVQFANR AE A+ LNGT +G Q++RLSWGRS NKQ
Sbjct: 334 GDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSN 393
Query: 356 AQWNGGGYYGFAQGYEAYGYAPP-TQDPNMY 385
QWNGG Y G + G Y+ P QDPNM+
Sbjct: 394 NQWNGGRYGGQSYGGYGGYYSVPQHQDPNMH 424
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 233/346 (67%), Gaps = 33/346 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
AS + +R+LWIGDLQ W++E+Y+ F HTGE +S K+IRNK T EGYGFIEFVSH+A
Sbjct: 9 ASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSA 68
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AERVLQT+NGTQMP TEQ FRLNWA++G GERR D GPD +IFVGDLA DVTDY+LQETF
Sbjct: 69 AERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETF 128
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
R Y SV+GAKVVTD TGRSKGYGFV+F DESE+ R+M+EMNGV CSTRPMRI AAT
Sbjct: 129 RTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRIS-AATP 187
Query: 248 KAATGQQYQKATYQNTQGSQG-------------------ENDPNNTTIFVGGLDPSVTD 288
K TG Q E D NNTTI+VG LD +V++
Sbjct: 188 KKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSE 247
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
+ LK F Q+GE+V VK+ GK CGFVQF R AE+A+ + G LG Q IR+SWGR
Sbjct: 248 EELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQ 307
Query: 349 SNKQS---------DQAQWNGGGYYGFAQ-GYEAYGYAPPTQDPNM 384
+ +Q DQ+QW+ YYG+ Q GYEAY Y QDP+M
Sbjct: 308 TARQDVPGGWGQQVDQSQWS--AYYGYGQPGYEAYAYG-AAQDPSM 350
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P P+ T P P ++++G+L + E + F GE VS KV K
Sbjct: 213 PVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKAC- 271
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
GF++F + A+AE +Q G + +Q R++W
Sbjct: 272 -----GFVQFGARASAEEAIQKMQGKIL--GQQVIRVSW 303
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 236/335 (70%), Gaps = 19/335 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T+NG QMP TEQ FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
VKI AGK G+VQF R AE A+ + G +G Q I++SWG S + +Q D +QW+ Y
Sbjct: 243 VKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQMDPSQWS--AY 300
Query: 364 YGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
YG+ QGYEAY Y TQDP++Y YG + GY Y Q
Sbjct: 301 YGYGQGYEAYAYG-ATQDPSIYTYGAYAGYAQYPQ 334
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/410 (51%), Positives = 260/410 (63%), Gaps = 20/410 (4%)
Query: 4 QPPSQPSD-QTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPP---SQQT 59
QP S SD Q ++ + QWM Q + QH P P QQ
Sbjct: 2 QPTSNGSDSQATEQRTPPPQWMPMQYPAAAMVMQHHMMPPQHYAPPPPQPYMAYHHYQQQ 61
Query: 60 QPYGVAPD--ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
P+ + SS +++W+GDL WM+E+Y+ F GE S KVIRNKQT SEGY
Sbjct: 62 LPHALHAHHQGSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGY 121
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+EF SH AE+VLQ + G MP+TEQ FRLNWAT+G G++R D+ PD +IFVGDLAAD
Sbjct: 122 GFVEFYSHGTAEKVLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAAD 181
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
VTD +L ETF Y SVK AKVV D TGRSKGYGFVRFGD+ E+ ++MTEMNGV CS+R
Sbjct: 182 VTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSR 241
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
PMRIG AAT + +G YQ+ + N SQ E D NTTIFVGGLD +VT + LK F Q
Sbjct: 242 PMRIG-AATPRKTSG--YQQGSQSNGISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQ 298
Query: 298 YGELVHVKIPAGKRCGFVQFANRT----CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ- 352
YGE+V VKIP GK CGF +R+ AE+AL LNGT +G Q +RLSWGR+P+NKQ
Sbjct: 299 YGEIVSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNPANKQF 358
Query: 353 -SDQAQWNGGGYYGFAQGYEAYGYA-PPTQDPNMY---YGGFPGYGTYQQ 397
+D G YYG Y+ YGYA PP+ DP++Y YG +P YG +QQ
Sbjct: 359 RADFGNAWSGAYYG-GPVYDGYGYALPPSHDPSIYAAAYGAYPIYGGHQQ 407
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 234/331 (70%), Gaps = 16/331 (4%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S++ +++W+GDL WM+E+Y+ + F HTGE S K+IRNKQT EGYGF+EF S AAA
Sbjct: 60 SNEEAKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAA 119
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ+++G+ MP+TEQ FRLNWA++ AGERR D G D +IFVGDLAADVTD +LQETF
Sbjct: 120 EKVLQSYSGSMMPNTEQPFRLNWASF-AGERRADPGSDLSIFVGDLAADVTDSMLQETFA 178
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+M EMNG CS+RPMRIG A KK
Sbjct: 179 GKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPKK 238
Query: 249 -AATGQQY----------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+A QQY + QGSQ + D NNTTIFVGG+D VTD+ L+ F Q
Sbjct: 239 PSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNNTTIFVGGIDSDVTDEDLRQPFSQ 298
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQ 355
+GE+V VKIP GK C FVQFANR AE AL LNGT +G Q++RLSWGR+P+NKQ D
Sbjct: 299 FGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTPANKQWRGDH 358
Query: 356 A-QWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
QW+GG + G Y PP QDP MY
Sbjct: 359 GNQWHGGYFGGQGYAGYGYAM-PPNQDPGMY 388
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 252/397 (63%), Gaps = 33/397 (8%)
Query: 31 QQQQQQHQTPVPPP--------------VGWTPQPVPPPSQQTQPYGVAP--------DA 68
+++ Q +P PPP + + P P PP Q + + +A
Sbjct: 36 EEENQPKTSPTPPPHWMRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNA 95
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +++W+GDL WM+E+Y+ S F G E VS KVIRNK SEGYGF+EF SH
Sbjct: 96 FNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHD 155
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQE 185
A++VL+ FNGT MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDL+ DV+D +L E
Sbjct: 156 VADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHE 215
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA
Sbjct: 216 TFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT 275
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
+K G Q Q N ++ E D NTTIFVGGLD SVTD+ LK F ++GE+V VK
Sbjct: 276 PRK-TNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVK 334
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA---QWNGGG 362
IP GK CGFVQF NR AE+AL LNGT +G Q++RLSWGR+P+NKQ QW
Sbjct: 335 IPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDP 393
Query: 363 YYGFAQGYEAYGYAPPTQDPNMYYGG--FPGYGTYQQ 397
YYG Q Y YGY P DP MY +P YG +QQ
Sbjct: 394 YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQ 429
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 231/309 (74%), Gaps = 15/309 (4%)
Query: 65 APDASSD--------GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
+PDAS+ +++LW+GDLQ WM+ESY+ SIF TGE VS K+IRNK + F EG
Sbjct: 3 SPDASAQQWSQQPPIDMKTLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEG 62
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+EF SHA AERVL F GTQMP TEQ FRLNWA +G GERR + GP+ +IFVGDLA
Sbjct: 63 YGFVEFASHACAERVLTAFTGTQMPQTEQLFRLNWAYFGIGERRPEGGPENSIFVGDLAP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
DVTDY+LQETFR Y SV+GAKVVTD TGRSKGYGFVRF D+SE++R+M+EMNG+ CS+
Sbjct: 123 DVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDSERVRAMSEMNGIYCSS 182
Query: 237 RPMRIGPAATKKAA--TGQQYQKATYQNT---QGSQGENDPNNTTIFVGGLDPSVTDDIL 291
RPMRI A KKA + QK T T Q +NDPNNTTIFVGGLDP+V+++ L
Sbjct: 183 RPMRINAATPKKALIPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFVGGLDPAVSEEEL 242
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+ FG++GELV+VKIP GK CGFVQF +R+CAE+AL L+GT + Q+IRLSWGR+ +NK
Sbjct: 243 QKTFGEFGELVYVKIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQQAIRLSWGRT-ANK 301
Query: 352 QSDQAQWNG 360
Q A W G
Sbjct: 302 QY-PAGWGG 309
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/340 (57%), Positives = 242/340 (71%), Gaps = 19/340 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDL WM+E Y+ + F T E S KVIRNKQT FSEGYGF+EF +HAAAE+VLQ
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T++ MP+ +Q FRLNWAT+ G++R ++G D +IFVGDLAADVTD +L ETF Y S
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AKVV D TGRSKGYGFVRFGD++E+ ++MTEMNGV CS+RPMRIG AAT + ++G
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGY 295
Query: 254 QYQKAT---YQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
Q Q ++ Y N QGSQ + D NTTIFVGGLDP+V+D+ L+ F QYGE+V VKIP
Sbjct: 296 QQQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIP 355
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD---QAQWNGGGYY 364
+R QFANR AE+AL LNGT +G Q++RL WGR+P+NKQS QW G YY
Sbjct: 356 VEERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSRGDFGNQWT-GPYY 414
Query: 365 GFAQGYEAYGYA-PPTQDPNM------YYGGFPGYGTYQQ 397
G Y+ YGYA PP DP M YG +P YGT+QQ
Sbjct: 415 G-GHFYDGYGYAFPPQHDPGMYAAAAAAYGAYPIYGTHQQ 453
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 227/320 (70%), Gaps = 13/320 (4%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FR+NWA++ G+RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D
Sbjct: 61 QPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K + +
Sbjct: 121 TGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGS 174
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
++ + D NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R AE
Sbjct: 175 AARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAE 234
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQ-AQWNGGGYYGFAQGYEAYGY-APPTQ 380
AL LNG+ +G Q++RLSWGR+P+NKQ SD +QWN G YY + Y YGY AP
Sbjct: 235 DALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPA 294
Query: 381 DPNMY---YGGFPGYGTYQQ 397
DP MY YG +P YG QQ
Sbjct: 295 DPGMYAAAYGAYPFYGNQQQ 314
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 186 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 239
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 240 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 268
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 235/328 (71%), Gaps = 13/328 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 101 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 160
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 161 NFTGHVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 220
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 221 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 274
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +YG+L VKIP GK+CG
Sbjct: 275 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCG 333
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQFA+RT AE+AL LNG+ +G Q++RLSWGRSPS+KQS D YYG Y
Sbjct: 334 FVQFASRTDAEEALQGLNGSLIGKQAVRLSWGRSPSHKQSRGDSGNRRNNMYYG-TPFYG 392
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG Q
Sbjct: 393 GYGYASPVPHPNMYAAAYGAYPMYGNQQ 420
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 216/306 (70%), Gaps = 20/306 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+E+Y+ ++F HTGE +S KVIRNKQT + EGYGFIEF SH AAERVL
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+NGTQMP TEQ FRLNWA++G GE+R D GP+ +IFVGDLA DVTDY+L ETFR +
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVV D TGRSKGYGFVRF DE+E+ R+M+EMNGV CS+RPMRI A KKA A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 252 GQQYQKATYQNTQGSQG------------------ENDPNNTTIFVGGLDPSVTDDILKT 293
G A Q + ++DP NTTIFVGGLD ++T++ +K
Sbjct: 207 GLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQ 266
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP-SNKQ 352
F GELV VKIP GK C FVQ+A R AE AL L+GT +G Q+IRLSWGRSP S KQ
Sbjct: 267 TFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGRSPTSTKQ 326
Query: 353 SDQAQW 358
+ + W
Sbjct: 327 APTSPW 332
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 39 TPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
T VP P +P PPPS Q + PD+ ++++G L + E + F H G
Sbjct: 215 TIVPQPTIASPI-TPPPSLSIQSQVLPPDSDPTNT-TIFVGGLDLNITEEEVKQTFSHIG 272
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
E VS K+ K G F+++ +AE LQ +GT + +Q RL+W
Sbjct: 273 ELVSVKIPPGK------GCAFVQYAQRNSAEDALQRLHGTVI--GQQAIRLSW 317
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 230/332 (69%), Gaps = 11/332 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+++W+GDLQ WM+E+Y+ S F E VS KVIRNK SEGYGF+EF SH A++V
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
LQ FNG MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDLA DV+D +L ETF
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA +K
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK-T 281
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G Q Q + ++ E D NTTIFVGGLD SVTD+ LK F ++GE+V VKIP GK
Sbjct: 282 NGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGK 341
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA---QWNGGGYYGFA 367
CGFVQF NR AE+AL LNGT +G Q++RLSWGR+P+NKQ QW YYG
Sbjct: 342 GCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW-VDPYYG-G 399
Query: 368 QGYEAYGYAPPTQDPNMYYGG--FPGYGTYQQ 397
Q Y YGY P DP MY +P YG +QQ
Sbjct: 400 QFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQ 431
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 236/344 (68%), Gaps = 28/344 (8%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T+NG QMP TEQ FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFLLQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---------D 354
VKI AGK G+VQF R AE A+ + G +G Q I++SWG S + +Q D
Sbjct: 243 VKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQDVPGGWGVQMD 302
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQ 397
+QW+ YYG+ QGYEAY Y TQDP++Y YG + GY Y Q
Sbjct: 303 PSQWS--AYYGYGQGYEAYAYG-ATQDPSIYTYGAYAGYAQYPQ 343
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 227/310 (73%), Gaps = 19/310 (6%)
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
KVIRNKQT SEGYGF+EF SHAAAE+VLQ + G MP+T+Q FRLNWAT+ G++R D+
Sbjct: 2 KVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDN 61
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
GPD +IFVGDLA+DV+D +L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+
Sbjct: 62 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 121
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY----QNTQGSQGENDPNNTTIFV 279
++MTEMNGV CS+RPMRIG AAT + ++G Q Q +++ N Q + D NTTIFV
Sbjct: 122 QAMTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFV 180
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
GGLDP+V+D+ L+ F QYGE+V VKIP GK CGFVQFANR AE AL LNGT +G Q+
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 240
Query: 340 IRLSWGRSPSNKQSDQA--------QWNGGGYYGFAQGYEAYGYA-PPTQDPNMY---YG 387
+RLSWGR+P+NKQ++ QW+ G YYG Q Y+ YGYA PP DP MY YG
Sbjct: 241 VRLSWGRNPANKQANSLFMRADFGNQWS-GAYYG-GQVYDGYGYALPPPHDPTMYAAAYG 298
Query: 388 GFPGYGTYQQ 397
+P YG +QQ
Sbjct: 299 AYPVYGNHQQ 308
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + +S + F G + KV+ + T S+GYGF+ F + +
Sbjct: 66 SIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMT 125
Query: 134 TFNGT-----------QMPSTEQNFRLNWATYGA----GERRQDDGPDF--TIFVGDLAA 176
NG P ++ ++++G G Q DG TIFVG L
Sbjct: 126 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDP 185
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V+D L++ F + Y + K+ KG GFV+F + + ++ ++NG +
Sbjct: 186 NVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGK 238
Query: 237 RPMRI 241
+ +R+
Sbjct: 239 QTVRL 243
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 229/323 (70%), Gaps = 15/323 (4%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ S FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F+G MP+T+
Sbjct: 1 MDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFSGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 61 QPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD+SE+ ++MTEMNGV CS+RPMRIGPA +K++ + ++
Sbjct: 121 TGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDG 180
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
G D NTT+FVGGLDP+V+++ L+ F QYGE+ VKIP GK+CGFVQFA R AE
Sbjct: 181 G-----DLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAE 235
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQ---SDQAQWNGGG-YYGFAQGYEAYGY--APP 378
AL LNG+ +G Q++RLSWGR+P+NKQ + QWN GG YY Y YGY A P
Sbjct: 236 DALQGLNGSTIGKQNVRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAP 295
Query: 379 TQDPNMY----YGGFPGYGTYQQ 397
DP MY YG +P YG QQ
Sbjct: 296 FPDPGMYAAPAYGAYPFYGNQQQ 318
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++F AE LQ
Sbjct: 187 TVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQC------GFVQFAQRKNAEDALQG 240
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +QN RL+W A ++ R D+G
Sbjct: 241 LNGSTI--GKQNVRLSWGRNPANKQFRGDNG 269
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 175/297 (58%), Positives = 215/297 (72%), Gaps = 17/297 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
IR++W+GDL WM+E+++ + F HTGE S KVIRNKQT SEGYGF+EF + A AE+VL
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 133 QTFNGTQMPSTEQNFRLNWATY----GAGERRQDDG-PDFTIFVGDLAADVTDYVLQETF 187
Q FNGT MP+T+Q FRLNWAT+ G GERR + D ++FVGDLA DVTD +LQETF
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +SS+KGAKVV D TGRSKGYGFVRFGDESE+ R+MTEMNGV CS+RPMR+G A K
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 248 KA-ATGQQYQKAT--------YQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K QQY + N QGSQ E D NNTTIFVGGLD ++D+ L+ F
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPF 354
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
Q+G+++ VKIP GK CGFVQ A+R AE+A+ LNGT +G Q++RLSWGRSP NK
Sbjct: 355 LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 13/328 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y S
Sbjct: 159 NFAGHVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+RIGPA ++ +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDS 278
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ Q + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 279 -------GSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCG 331
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQAQWNGGGYYGFAQGYE 371
FVQF NR AE+AL L+G+ +G Q++RLSWGRSP++KQ D G YYG Y
Sbjct: 332 FVQFVNRADAEEALQALSGSTIGKQAVRLSWGRSPASKQPRGDSGHRRNGMYYG-TPFYG 390
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG Q
Sbjct: 391 GYGYASPVPHPNMYAAAYGAYPFYGNQQ 418
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 175/297 (58%), Positives = 215/297 (72%), Gaps = 17/297 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
IR++W+GDL WM+E+++ + F HTGE S KVIRNKQT SEGYGF+EF + A AE+VL
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 133 QTFNGTQMPSTEQNFRLNWATY----GAGERRQDDG-PDFTIFVGDLAADVTDYVLQETF 187
Q FNGT MP+T+Q FRLNWAT+ G GERR + D ++FVGDLA DVTD +LQETF
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +SS+KGAKVV D TGRSKGYGFVRFGDESE+ R+MTEMNGV CS+RPMR+G A K
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 248 KA-ATGQQYQKAT--------YQN---TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K QQY + N QGSQ E D NNTTIFVGGLD ++D+ L+ F
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPF 354
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
Q+G+++ VKIP GK CGFVQ A+R AE+A+ LNGT +G Q++RLSWGRSP NK
Sbjct: 355 LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNKH 411
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 189/325 (58%), Positives = 228/325 (70%), Gaps = 16/325 (4%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SEGYGF+EF+S +AAE
Sbjct: 116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE 175
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRA 189
LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDLA DV+D VL ETF
Sbjct: 176 ALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAG 235
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG CS+R MR+G A K+A
Sbjct: 236 RYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRA 295
Query: 250 AT-GQQ-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A GQQ A GS + + NN+TIFVGGLD VT++ L F +GE+V
Sbjct: 296 AAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVS 355
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQA-QWNG 360
VKIP GK CGFVQFANR AE+A+ LNGT +G ++RLSWGRSP NKQ SD QWNG
Sbjct: 356 VKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNG 414
Query: 361 GGYYGFAQGYEAYGYAPPTQDPNMY 385
G Y QGY GYA QD NMY
Sbjct: 415 G--YSRGQGYNN-GYA--NQDSNMY 434
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/328 (53%), Positives = 232/328 (70%), Gaps = 13/328 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 164 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 277
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 278 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 336
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSWGRSPS+KQS D YYG Y
Sbjct: 337 FVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYG 395
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG+ Q
Sbjct: 396 GYGYASPVPHPNMYAAAYGAYPVYGSQQ 423
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/328 (53%), Positives = 232/328 (70%), Gaps = 13/328 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 164 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 277
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 278 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 336
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSWGRSPS+KQS D YYG Y
Sbjct: 337 FVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYG 395
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG+ Q
Sbjct: 396 GYGYASPVPHPNMYAAAYGAYPVYGSQQ 423
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 217/324 (66%), Gaps = 38/324 (11%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+E+Y+ ++F HTGE +S KVIRNKQT + EGYGFIEF SH AAERVL
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+NGTQMP TEQ FRLNWA++G GE+R D GP+ +IFVGDLA DVTDY+L ETFR +
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-AT 251
SV+GAKVV D TGRSKGYGFVRF DE+E+ R+M+EMNGV CS+RPMRI A KKA A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 252 GQQYQKATYQNTQGSQG------------------------------------ENDPNNT 275
G A Q + ++DP NT
Sbjct: 207 GLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTNT 266
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
TIFVGGLD ++T++ +K F Q GELV VKIP GK C FVQ+A R AE AL L+GT +
Sbjct: 267 TIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVI 326
Query: 336 GGQSIRLSWGRSP-SNKQSDQAQW 358
G Q+IRLSWGRSP S KQ+ + W
Sbjct: 327 GQQAIRLSWGRSPTSTKQAPTSPW 350
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPPS Q + PD+ ++++G L + E + F GE VS K+ K
Sbjct: 246 PPPSLSIQSQVLPPDSDPTNT-TIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGK--- 301
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
G F+++ +AE LQ +GT + +Q RL+W
Sbjct: 302 ---GCAFVQYAQRNSAEDALQRLHGTVI--GQQAIRLSW 335
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/328 (53%), Positives = 232/328 (70%), Gaps = 13/328 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ
Sbjct: 65 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 124
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D++IFVGDLAADVTD +L E F Y S
Sbjct: 125 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 184
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGP AT +
Sbjct: 185 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGP------ATPR 238
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 239 RSSGDSGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCG 297
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSWGRSPS+KQS D YYG Y
Sbjct: 298 FVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYG 356
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG+ Q
Sbjct: 357 GYGYASPVPHPNMYAAAYGAYPVYGSQQ 384
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/321 (56%), Positives = 228/321 (71%), Gaps = 18/321 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H+GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+TFNG QMP T+Q FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKG+KVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
VKI AGK G+VQF R AE A+ + G +G Q I++SWG + + +Q D +QW+ Y
Sbjct: 243 VKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQMDPSQWS--AY 300
Query: 364 YGFAQGYEAYGYAPPTQDPNM 384
YG+ QGYE+Y Y T DP++
Sbjct: 301 YGYGQGYESYAYG-ATHDPSL 320
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 226/325 (69%), Gaps = 17/325 (5%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+ F+G MP+T+
Sbjct: 1 MDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLEGFSGHIMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSSVKGAKVV D
Sbjct: 61 QPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRSKGYGFVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++ ++ +
Sbjct: 121 TGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSARPDG 180
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
G D NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CGFVQFA R AE
Sbjct: 181 G-----DLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAE 235
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQ----SDQAQW-NGGGYYG---FAQGYEAYGYA 376
AL LNG+ +G Q++RLSWGR+P+NKQ + QW NGG YY F G Y A
Sbjct: 236 DALQGLNGSTIGKQAVRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAA 295
Query: 377 PPTQDPNMY----YGGFPGYGTYQQ 397
P DP MY YG +P YG QQ
Sbjct: 296 APFPDPGMYAAPAYGAYPFYGNQQQ 320
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PD ++++G L P + E + F GE S K+ KQ GF++F
Sbjct: 178 PDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQC------GFVQFAQR 231
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
AE LQ NG+ + +Q RL+W A ++ R D+G
Sbjct: 232 KNAEDALQGLNGSTI--GKQAVRLSWGRNPANKQFRGDNG 269
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 166/279 (59%), Positives = 210/279 (75%), Gaps = 5/279 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+E+Y+ + FG+TGE V+ KVIRNKQT SEGYGF+EF SHAAAERVL+
Sbjct: 92 KTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAERVLE 151
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T+Q FRLNWA++ G+RR D D +IFVGDLA+DV D L E F + YSS
Sbjct: 152 GFSGHIMPNTDQPFRLNWASFSMGDRRSDVASDHSIFVGDLASDVNDATLLEVFSSRYSS 211
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD+SE+ +MTEMNGV CS+RPMRIGPA +K++
Sbjct: 212 VKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSSRPMRIGPATPRKSSGTS 271
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ + G D NTT+FVGGLDP V+++ L+ F QYGE+ VKIP GK+CG
Sbjct: 272 GSNGSSARPDGG-----DLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCG 326
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
FVQFA R AE AL LNG+ +G Q++RLSWGR+P+NKQ
Sbjct: 327 FVQFAQRKNAEDALQGLNGSTIGKQAVRLSWGRNPANKQ 365
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/320 (52%), Positives = 221/320 (69%), Gaps = 20/320 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+ + SEGYGF+EF SH +AE+ LQ
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y S
Sbjct: 169 NFSGHVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRS 228
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+R+GPA +++
Sbjct: 229 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRS---- 284
Query: 254 QYQKATYQNTQGS----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q GS Q + D N T++VGGLDP+V++D L+ F +YG+L VKIP G
Sbjct: 285 -------QGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 337
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-----DQAQWNGGGYY 364
K+CGFVQF NR AE+AL LNG +G Q++RLSWGRSP++KQS + NG G Y
Sbjct: 338 KQCGFVQFVNRADAEEALQGLNGATIGKQAVRLSWGRSPASKQSRGDSGHRRNGNGNGMY 397
Query: 365 GFAQGYEAYGYAPPTQDPNM 384
Y YGYA P PNM
Sbjct: 398 YGTPFYSGYGYASPVPHPNM 417
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 233/364 (64%), Gaps = 26/364 (7%)
Query: 39 TPVPPPVGWTPQPVPPPSQQTQPY-------------GVAPDASSDGIRSLWIGDLQPWM 85
P PPP PPPS Q + G + D R++W+GDLQ WM
Sbjct: 57 IPYPPPHHPMVAAPPPPSLQFVKHFTPPSSVTPPPPTGSGGNGGEDN-RTIWVGDLQYWM 115
Query: 86 EESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
+E+Y+ S FG +GE V+ KVIRN+ + SEGYGFIEF +H +AE+ LQ F+G MP+T++
Sbjct: 116 DENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQNFSGHVMPNTDR 175
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
F+LNWA+Y GE+R + D +IFVGDLA DVTD +L E F Y SVKGAKV+ D T
Sbjct: 176 AFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANT 235
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
GRS+GYGFVRFGD+++++ +MTEMNGV CSTRP+R+GPA +++ + +
Sbjct: 236 GRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRS-------QGDSGTSPP 288
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQ 325
Q D N T++VGGLDP+V++D L+ F +YG+L VKIP GK+CGFVQF NR AE+
Sbjct: 289 RQSHVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEE 348
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQG---YEAYGYAPPTQ 380
AL LNG+ +G Q++RLSWGRSP++KQS D G G G Y YGYA P
Sbjct: 349 ALHGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGNCNGMYYGTPFYGGYGYASPIP 408
Query: 381 DPNM 384
PNM
Sbjct: 409 HPNM 412
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 223/313 (71%), Gaps = 10/313 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ S FG +GE V+ KVIRN+QT +EGYGF+EF SHA+A++ LQ
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKALQ 163
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 164 NFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKYRS 223
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFG++S++ R+MTEMNGV CSTRP+RIGPA ++ A
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTA--- 280
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
++ + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CG
Sbjct: 281 ----GDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCG 336
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ--SDQAQWNGGGYYGFAQGYE 371
FVQ+ NRT AE+AL LNG+ +G Q++RLSWGRSPS+KQ D YYG Y
Sbjct: 337 FVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQPRGDSGNRRNNMYYG-TPFYG 395
Query: 372 AYGYAPPTQDPNM 384
YGYA P PNM
Sbjct: 396 GYGYASPVPHPNM 408
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 190/348 (54%), Positives = 230/348 (66%), Gaps = 39/348 (11%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SEGYGF+EF+S +AAE
Sbjct: 116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE 175
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQETFRA 189
LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDLA DV+D VL ETF
Sbjct: 176 ALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAG 235
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG CS+R MR+G A K+A
Sbjct: 236 RYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRA 295
Query: 250 AT-GQQ------------YQKATYQNT----------------QGSQGENDPNNTTIFVG 280
A GQQ A+ N GS + + NN+TIFVG
Sbjct: 296 AAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALTLAGGHGGNGSMSDGESNNSTIFVG 355
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
GLD VT++ L F +GE+V VKIP GK CGFVQFANR AE+A+ LNGT +G ++
Sbjct: 356 GLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTV 415
Query: 341 RLSWGRSPSNKQ--SDQA-QWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
RLSWGRSP NKQ SD QWNGG Y QGY GYA QD NMY
Sbjct: 416 RLSWGRSP-NKQWRSDSGNQWNGG--YSRGQGYNN-GYA--NQDSNMY 457
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/318 (53%), Positives = 221/318 (69%), Gaps = 18/318 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++W+GDLQ WM+E+Y+ S FG GE V+ KVIRN+ + SEGYGF+EF SH +AE+ LQ
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+G MP+TE+ F+LNWA+Y GE+R + PD +IFVGDLA DVTD +L E F Y S
Sbjct: 153 NFSGHVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYRS 212
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNGV CSTRP+R+G A +++
Sbjct: 213 VKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRS---- 268
Query: 254 QYQKATYQNTQGS----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
Q GS Q + D N T++VGGLDP+V++D L+ F +YG+L VKIP G
Sbjct: 269 -------QGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 321
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD---QAQWNGGGYYGF 366
K+CGFVQF NR AE+AL LNG+ +G Q+IRLSWGRSP++KQS + NG G Y
Sbjct: 322 KQCGFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSPTSKQSRGDYGHRRNGNGMYYG 381
Query: 367 AQGYEAYGYAPPTQDPNM 384
Y YGYA P PNM
Sbjct: 382 TPFYGGYGYASPVAHPNM 399
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/328 (53%), Positives = 232/328 (70%), Gaps = 14/328 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 272
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 273 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 330
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSW RSPS+KQS D YYG Y
Sbjct: 331 FVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYG 389
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG Q
Sbjct: 390 GYGYASPVPHPNMYAAAYGTYPLYGNQQ 417
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 176/328 (53%), Positives = 232/328 (70%), Gaps = 14/328 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 272
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 273 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 330
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSW RSPS+KQS D YYG Y
Sbjct: 331 FVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYG 389
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG Q
Sbjct: 390 GYGYASPVPHPNMYAAAYGTYPLYGNQQ 417
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 205/400 (51%), Positives = 246/400 (61%), Gaps = 47/400 (11%)
Query: 23 WMAYQQQ-------------------------SQQQQQQHQTPVPPPVGWTPQPVPPPSQ 57
WMA QQ +Q QQH P
Sbjct: 50 WMAAMQQYPAAAMAMMQQQQMMMYPHHQYAPYNQAAYQQH----PQFQYAAAYQQQQQHH 105
Query: 58 QTQPYGVAPDASS--DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE 115
Q+Q P S D +++LW+GDL WM+E+Y+ + F HT E S KVIRNKQT SE
Sbjct: 106 QSQQQKQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSE 165
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDL 174
GYGF+EF+S +AAE LQ+F+G MP+ EQ FRLNWA++ GE+R ++GPD +IFVGDL
Sbjct: 166 GYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDL 225
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A DV+D VL ETF Y SVKGAKVV D TGRSKGYGFVRFGDE+E+ R+MTEMNG C
Sbjct: 226 APDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFC 285
Query: 235 STRPMRIGPAATKKAAT-GQQ--YQKATYQNTQGSQG---ENDPNNTTIFVGGLDPSVTD 288
S+R MR+G A K+AA GQQ Q T G G + + NN+TIFVGGLD VT+
Sbjct: 286 SSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTE 345
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
+ L F Q+GE+V VKIP GK CGFVQFANR AE+A+ LNGT +G ++RLSWGRSP
Sbjct: 346 EDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP 405
Query: 349 SNKQ--SDQA-QWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
NKQ SD QWNGG Y QGY GYA QD NMY
Sbjct: 406 -NKQWRSDTGNQWNGG--YSRGQGYNN-GYA--NQDSNMY 439
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 176/328 (53%), Positives = 232/328 (70%), Gaps = 14/328 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 48 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 108 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKV+ D TGRS+GYGFVRFGD++++ +M+EMNGV CSTRP+RIGP AT +
Sbjct: 168 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRIGP------ATPR 221
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ + +T G + D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CG
Sbjct: 222 RSSGDSGSSTPG-HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCG 279
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYE 371
FVQF +RT AE+AL LNG+ +G Q++RLSW RSPS+KQS D YYG Y
Sbjct: 280 FVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYG 338
Query: 372 AYGYAPPTQDPNMY---YGGFPGYGTYQ 396
YGYA P PNMY YG +P YG Q
Sbjct: 339 GYGYASPVPHPNMYAAAYGTYPLYGNQQ 366
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 228/330 (69%), Gaps = 27/330 (8%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++ESY++ F H+GE VS K+IRNK T EGYGF+EFVSHA+AE L
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+TFNG QMP T+Q FRLNWA++G D GPD +IFVGDLA DVTD++LQETFRA Y
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFG------DSGPDHSIFVGDLAPDVTDFILQETFRAHYP 122
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKG+KVVTD TGRSKGYGFV+F DE+++ R+MTEMNGV CSTRPMRI A KK A+
Sbjct: 123 SVKGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASF 182
Query: 253 Q-QYQ--KATYQN------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q QY KA YQ END NNTT+ +G LD +VT++ LK F Q+G++V
Sbjct: 183 QHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAFVQFGDIVL 242
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---------D 354
VKI AGK G+VQF R AE A+ + G +G Q I++SWG + + +Q D
Sbjct: 243 VKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLTARQDVPGGWGAQMD 302
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNM 384
+QW+ YYG+ QGYE+Y Y T DP++
Sbjct: 303 PSQWS--AYYGYGQGYESYAYG-ATHDPSL 329
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/252 (65%), Positives = 202/252 (80%), Gaps = 5/252 (1%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WM+++Y+ F +TGE + K+IR+K + +GYGF+EF S AAAER
Sbjct: 83 DEVRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAER 142
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQT+NG MP+ + FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDY+LQETFR
Sbjct: 143 VLQTYNGQMMPNVDLTFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVH 199
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+ CS+RPMRIGPAA++K A
Sbjct: 200 YPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNA 259
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G ++ N+QG+Q ENDPNNTTIFVGGLDP+VT+D+LK F YGE++HVKIP GK
Sbjct: 260 GGVVQERVP--NSQGAQSENDPNNTTIFVGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGK 317
Query: 311 RCGFVQFANRTC 322
RCGFVQF R C
Sbjct: 318 RCGFVQFVTRRC 329
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + D + F V+ K++ D+ +G+ +GYGFV F + R +
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNT-GEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQ 145
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE--NDPNNTTIFVGGLDPS 285
NG + + T++ S GE +D + TIFVG L
Sbjct: 146 TYNGQMMPNVDL-------------------TFRLNWASAGEKRDDTPDYTIFVGDLAAD 186
Query: 286 VTDDILKTVFG-QYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQ 338
VTD +L+ F Y + K+ K GFV+F + T +A++ +NG +
Sbjct: 187 VTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSR 246
Query: 339 SIRLSWGRSPSN 350
+R+ S N
Sbjct: 247 PMRIGPAASRKN 258
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/334 (54%), Positives = 223/334 (66%), Gaps = 18/334 (5%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGFIEF+S AAA
Sbjct: 103 SGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAA 162
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQETF 187
E VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD +IFVGDL+ DVTD +L ETF
Sbjct: 163 EEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSPDVTDALLHETF 222
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A K
Sbjct: 223 FDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGVATPK 282
Query: 248 KAATGQQYQK-----------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+A QQ A GSQ + + N TIFVGG+D VTD+ L+ F
Sbjct: 283 RAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTNATIFVGGIDADVTDEDLRQPFS 342
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---S 353
Q+GE+V VKIP GK CGFVQFA R AE A+ LNGT +G ++RLSWGRSP NKQ
Sbjct: 343 QFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTVIGKNTVRLSWGRSP-NKQWRGD 401
Query: 354 DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG 387
QWNGG Y QGY G D N Y+G
Sbjct: 402 SGQQWNGG--YSRGQGYNNGGGYANHHDSNNYHG 433
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 235/345 (68%), Gaps = 23/345 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-AAT 251
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI A KK
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 201
Query: 252 GQQY-QKATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
QQY KA Y T S E+D TTI V LD +VT++ LK F Q G
Sbjct: 202 QQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLG 261
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----QSDQ 355
E+++VKIPA K G+VQF R AE+A+ + G +G Q++R+SW ++P Q+D
Sbjct: 262 EVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADP 321
Query: 356 AQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQPG 399
QWNG YG AYG TQDP++Y YGG+ GY Y Q G
Sbjct: 322 NQWNGYYGYGQGYDAYAYG---ATQDPSVYAYGGY-GYPQYPQQG 362
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 221/326 (67%), Gaps = 10/326 (3%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTG---EFVSGKVIRNKQTNFSEGYGFIEFV 123
+AS+ +++W+GDL WM+E+Y+ S F + VS KVIRNK SEGYGF+EF
Sbjct: 101 NASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFD 160
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYV 182
SH A++VLQ FNGT MP TEQ FRLNWA++ GE+R +++GPD +IFVGDLA DV+D +
Sbjct: 161 SHDVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTL 220
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIG
Sbjct: 221 LHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG 280
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
PA +K TG Q Q N ++ E D NTTIFVGGLD SVTDD L+ F ++GE+V
Sbjct: 281 PATPRKT-TGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIV 339
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA---QWN 359
VKIP GK CGFVQF NR AE+AL LNGT +G Q++RLSWGR+ +NKQ QW
Sbjct: 340 SVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQANKQPRDKYGNQWV 399
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNMY 385
Y G Y P DP MY
Sbjct: 400 APYYGGQYYNGYGYMV--PQPDPRMY 423
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 233/342 (68%), Gaps = 21/342 (6%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 141
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI AAT K G
Sbjct: 142 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRIS-AATPKKNVG 200
Query: 253 QQYQKATYQNTQGSQG----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
Q Q T + E+D TTI V LD +VT++ LK F Q GE++
Sbjct: 201 VQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVI 260
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----QSDQAQW 358
+VKIPA K G+VQF R AE+A+ + G +G Q++R+SW ++P Q+D QW
Sbjct: 261 YVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQW 320
Query: 359 NGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQPG 399
NG YG AYG TQDP++Y YGG+ GY Y Q G
Sbjct: 321 NGYYGYGQGYDAYAYG---ATQDPSVYAYGGY-GYPQYPQQG 358
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 177/334 (52%), Positives = 222/334 (66%), Gaps = 18/334 (5%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+S AAA
Sbjct: 60 SGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAA 119
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQETF 187
E VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +L ETF
Sbjct: 120 EEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETF 179
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G A K
Sbjct: 180 SDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPK 239
Query: 248 KAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDILKTVFG 296
+A QQ + G G N + N TIFVGG+DP V D+ L+ F
Sbjct: 240 RAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFS 299
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ---S 353
Q+GE+V VKIP GK CGFVQFA+R AE A+ LNGT +G ++RLSWGRSP NKQ
Sbjct: 300 QFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGD 358
Query: 354 DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG 387
QWNGG Y GY G D N Y+G
Sbjct: 359 SGQQWNGG--YSRGHGYNNGGGYANHHDSNNYHG 390
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/347 (53%), Positives = 229/347 (65%), Gaps = 25/347 (7%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ W++E+Y+ S F TGE VS KVIRNK T EGYGFIEF+SHAAAER L
Sbjct: 22 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 81
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGTQMP TE FRLNWA++G+G++ D GPD +IFVGDLA DVTDY+LQETFR YS
Sbjct: 82 QTYNGTQMPGTELTFRLNWASFGSGQKV-DAGPDHSIFVGDLAPDVTDYLLQETFRVHYS 140
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
SV+GAKVVTD +TGRSKGYGFV+F +ESE+ R+M EMNG+ CSTRPMRI A KK
Sbjct: 141 SVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGV 200
Query: 249 -----------AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+A Q Q QG E+D TTI + LDP+VT++ LK F Q
Sbjct: 201 QQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQ 260
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK----QS 353
GE+++VKIPA K G+VQF R AE+A+ + G +G Q++R+SW ++P Q+
Sbjct: 261 LGEIIYVKIPATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRISWSKNPGQDGWVAQA 320
Query: 354 DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPGYGTYQQPG 399
D QWNG TQDP++Y YGG+ GY Y Q G
Sbjct: 321 DPNQWNGY---YGYGQGYDAYGYGTTQDPSLYAYGGY-GYPQYPQQG 363
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 13/121 (10%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
QQQ + PVP V P + QP P S ++ I +L P + E +
Sbjct: 201 QQQYVTKGPVPSAVA-----APVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELK 255
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
F GE + K+ K GYG+++F + +AE +Q G + +Q R++W
Sbjct: 256 KAFSQLGEIIYVKIPATK------GYGYVQFKTRPSAEEAVQKMQGQVI--GQQAVRISW 307
Query: 152 A 152
+
Sbjct: 308 S 308
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 218/312 (69%), Gaps = 13/312 (4%)
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+FG + V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+Q FR+NWA
Sbjct: 70 MFGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWA 129
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
++ G+RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D TGRSKGYG
Sbjct: 130 SFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYG 189
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
FVRFGD++E+ +MTEMNGV CSTRPMRIGPA +K + + ++ + D
Sbjct: 190 FVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGSAARSDGDL 243
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
NTT+FVGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R AE AL LNG
Sbjct: 244 TNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNG 303
Query: 333 TQLGGQSIRLSWGRSPSNKQ--SDQ-AQWNGGGYYGFAQGYEAYGY-APPTQDPNMY--- 385
+ +G Q++RLSWGR+P+NKQ SD +QWN G +Y + Y YGY AP DP MY
Sbjct: 304 STIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMYAAA 363
Query: 386 YGGFPGYGTYQQ 397
YG +P YG QQ
Sbjct: 364 YGAYPFYGNQQQ 375
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 247 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 300
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 301 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 329
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 215/306 (70%), Gaps = 13/306 (4%)
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ V+ KVIRNKQT SEGYGF+EF SHAAAE+VL+ F G MP+T+Q FR+NWA++ G+
Sbjct: 9 QVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGD 68
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
RR D D +IFVGDLA+DV D L ETF YSSVKGAKVV D TGRSKGYGFVRFGD
Sbjct: 69 RRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGD 128
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
++E+ +MTEMNGV CSTRPMRIGPA +K + + ++ + D NTT+F
Sbjct: 129 DNEKTHAMTEMNGVYCSTRPMRIGPATPRKTS------GTSGPTGSAARSDGDLTNTTVF 182
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VGGLDP+V++D L+ F QYGE+ VKIP GK+CGFVQF R AE AL LNG+ +G Q
Sbjct: 183 VGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQ 242
Query: 339 SIRLSWGRSPSNKQ--SDQ-AQWNGGGYYGFAQGYEAYGY-APPTQDPNMY---YGGFPG 391
++RLSWGR+P+NKQ SD +QWN G YY + Y YGY AP DP MY YG +P
Sbjct: 243 TVRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMYAAAYGAYPF 302
Query: 392 YGTYQQ 397
YG QQ
Sbjct: 303 YGNQQQ 308
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F GE S K+ KQ GF++FV AE LQ
Sbjct: 180 TVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQC------GFVQFVQRKNAEDALQG 233
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER-RQDDG 164
NG+ + +Q RL+W A ++ R D+G
Sbjct: 234 LNGSTI--GKQTVRLSWGRNPANKQLRSDNG 262
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/399 (48%), Positives = 240/399 (60%), Gaps = 35/399 (8%)
Query: 21 QQWMAYQQ---QSQQQQQQHQTPVPPPVGWTPQPVPPPSQ---QTQPYG----------- 63
QQWMA Q + Q Q + P + P P Q Q YG
Sbjct: 38 QQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHK 97
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+
Sbjct: 98 AIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFL 157
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYV 182
S AAAE VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +
Sbjct: 158 SRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVL 217
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G
Sbjct: 218 LHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG 277
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDIL 291
A K+A QQ + G G N + N TIFVGG+DP V D+ L
Sbjct: 278 IATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDL 337
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+ F Q+GE+V VKIP GK CGFVQFA+R AE A+ LNGT +G ++RLSWGRSP NK
Sbjct: 338 RQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NK 396
Query: 352 Q---SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG 387
Q QWNGG Y GY G D N Y+G
Sbjct: 397 QWRGDSGQQWNGG--YSRGHGYNNGGGYANHHDSNNYHG 433
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 221/343 (64%), Gaps = 24/343 (6%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +RSLWIGDLQ WM+ESY+ S F + VS KVIRNK T EGYGF+EF SHAAA
Sbjct: 12 ARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ LQ+F G MP TEQ FRLNWA G +R D G D +IFVGDLAADVTD +L ETF+
Sbjct: 71 EKALQSFTGAVMPRTEQAFRLNWACVGGDKR--DSGADDSIFVGDLAADVTDAMLLETFK 128
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y SVK AKVV D +GR +GYGFVRFGDE+E+ +MTEM+GV CS+RPMRI A KK
Sbjct: 129 SRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRIRTATPKK 188
Query: 249 AATGQQYQKATYQ-----NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q+ +YQ GE+D NTTIFVGGLD +V+ D LK VF YGE+ +
Sbjct: 189 QTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKY 248
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD--------- 354
KIP G+ CGFVQF R AE+AL ++G+ +G Q++RLSWGR P+NKQ
Sbjct: 249 TKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQRLSSSALPWYQ 308
Query: 355 ---QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYY-GGFPGYG 393
+QWN +Y + Y Y P QDP + Y G+ YG
Sbjct: 309 PPFDSQWN--AFYPYNHSQAPYAYLYP-QDPALVYTTGYQVYG 348
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/361 (49%), Positives = 226/361 (62%), Gaps = 30/361 (8%)
Query: 21 QQWMAYQQ---QSQQQQQQHQTPVPPPVGWTPQPVPPPSQ---QTQPYG----------- 63
QQWMA Q + Q Q + P + P P Q Q YG
Sbjct: 38 QQWMAAMQYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHK 97
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
S D +++LW+GDL WM+E+Y+ S F HTGE S KVIRNK T+ SEGYGF+EF+
Sbjct: 98 AIDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFL 157
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYV 182
S AAAE VLQ ++G+ MP+++Q FR+NWA++ GE+R ++GPD ++FVGDL+ DVTD +
Sbjct: 158 SRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVL 217
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L ETF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ R++TEMNG CS R MR+G
Sbjct: 218 LHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVG 277
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGEN-----------DPNNTTIFVGGLDPSVTDDIL 291
A K+A QQ + G G N + N TIFVGG+DP V D+ L
Sbjct: 278 IATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDL 337
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+ F Q+GE+V VKIP GK CGFVQFA+R AE A+ LNGT +G ++RLSWGRSP NK
Sbjct: 338 RQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NK 396
Query: 352 Q 352
Q
Sbjct: 397 Q 397
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/289 (57%), Positives = 202/289 (69%), Gaps = 8/289 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+ D +RSLWIGDLQ WM+ESY+ S F + VS KVIRNK T EGYGF+EF SHAAA
Sbjct: 12 ARDDVRSLWIGDLQYWMDESYLKSCFPQS-TIVSTKVIRNKITGHHEGYGFVEFESHAAA 70
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ LQ+F G MP TEQ FRLNWA G +R D G D +IFVGDLAADVTD +L ETF+
Sbjct: 71 EKALQSFTGAVMPRTEQAFRLNWACVGGDKR--DSGADDSIFVGDLAADVTDAMLLETFK 128
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y SVK AKVV D +GR +GYGFVRFGDE+E+ +MTEM+GV CS+RPMRI A KK
Sbjct: 129 SRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRIRTATPKK 188
Query: 249 AATGQQYQKATYQ-----NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
Q+ +YQ GE+D NTTIFVGGLD +V+ D LK VF YGE+ +
Sbjct: 189 QTQQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKY 248
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
KIP G+ CGFVQF R AE+AL ++G+ +G Q++RLSWGR P+NKQ
Sbjct: 249 TKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWGRHPANKQ 297
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 209/302 (69%), Gaps = 10/302 (3%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
M+E Y+ + FG +GE V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ F+G MP+T+
Sbjct: 1 MDEGYLHNCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTD 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
+ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F Y SVKGAKV+ D
Sbjct: 61 RAFKLNWASYSMGEKRSELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDAN 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++++
Sbjct: 121 TGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPP------ 174
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF NR AE
Sbjct: 175 -RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAE 233
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDP 382
+AL LNG+ +G Q++RLSWGRSP++KQS D G YYG Y YGYA P P
Sbjct: 234 EALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYG-TPFYGGYGYASPLPHP 292
Query: 383 NM 384
NM
Sbjct: 293 NM 294
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 184 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 237
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 238 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 265
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 222/354 (62%), Gaps = 38/354 (10%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ-TNFSEGYGF-IE----- 121
S+D I++LW+GDL WM+++Y+ + FGHTGE++ IR+ N +GF IE
Sbjct: 73 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEWLFVMCIRHIYFINRLLVFGFSIEVLYIV 132
Query: 122 ----------------FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
F E ++NGT MP+TEQ FRLNWAT+ G+RR D G
Sbjct: 133 KSFKIYEWIWLWAGDVFHELGILENFXHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGS 192
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D +IFVGDLA+DVTD +LQETF Y SVKGAKVVTD TGRSKGYGFVRFGDE+E+ R+
Sbjct: 193 DLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRA 252
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQY-----------QKATYQNTQGSQGENDPNN 274
M EMNG+ CS+RPMRIG A KKA+ QQ + QGSQ D N
Sbjct: 253 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 312
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
TTIFVGGLD VTD+ L+ F Q+GE+V VKIP GK CGFVQFANR AE AL LNGT
Sbjct: 313 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 372
Query: 335 LGGQSIRLSWGRSPSNKQ---SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY 385
+G Q++RLSWGR+P++KQ QWNG Y G YGYA P DPNMY
Sbjct: 373 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGG-QGYGGGYGYAMPQNDPNMY 425
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSH 125
DA SD S+++GDL + ++ + F V G KV+ + T S+GYGF+ F
Sbjct: 189 DAGSD--LSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 246
Query: 126 AAAERVLQTFNGTQMPS--------------------TEQNFRL--NWATYGA---GERR 160
R + NG S + Q L A+ GA G +
Sbjct: 247 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 306
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D + TIFVG L ++VTD L+++F + + V K+ KG GFV+F + +
Sbjct: 307 NGDSTNTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPV------GKGCGFVQFANRN 359
Query: 221 EQLRSMTEMNGVLCSTRPMRI 241
++ +NG + + +R+
Sbjct: 360 SAEDALQRLNGTVIGKQTVRL 380
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/303 (53%), Positives = 211/303 (69%), Gaps = 13/303 (4%)
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ V+ KVIRN+QT SEGYGF+EF SH +AE+ LQ F G MP+T++ F+LNWA+Y GE
Sbjct: 76 KVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGE 135
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
+R + D++IFVGDLAADVTD +L E F Y SVKGAKV+ D TGRS+GYGFVRFGD
Sbjct: 136 KRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGD 195
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
++++ +MTEMNG CSTRP+RIGP AT ++ + +T G + D N T++
Sbjct: 196 DNDKSHAMTEMNGAYCSTRPIRIGP------ATPRRSSGDSGSSTPG-HSDGDSTNRTVY 248
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VGGLDP+V++D L+ F +YG++ VKIP GK+CGFVQF +RT AE+AL LNG+ +G Q
Sbjct: 249 VGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQ 308
Query: 339 SIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY---YGGFPGYG 393
++RLSWGRSPS+KQS D YYG Y YGYA P PNMY YG +P YG
Sbjct: 309 AVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPHPNMYAAAYGAYPVYG 367
Query: 394 TYQ 396
+ Q
Sbjct: 368 SQQ 370
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 245 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 298
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 299 GLNGSVI--GKQAVRLSW 314
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/304 (52%), Positives = 204/304 (67%), Gaps = 18/304 (5%)
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
G+ V+ KVIRN+ + SEGYGF+EF SHA+AE+ LQ F+G MP+T++ F+LNWA+Y G
Sbjct: 139 GKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMG 198
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
E+R + D +IFVGDLA DVTD +L + F Y SVKGAKV+ D TGRS+GYGFVRFG
Sbjct: 199 EKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFG 258
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAA------TKKAATGQQYQKAT-----YQNTQGS 266
D++++ +MTEMNG CSTRP+RIGPA T +A G + Y GS
Sbjct: 259 DDNDKTHAMTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGS 318
Query: 267 ----QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTC 322
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF NR
Sbjct: 319 SPPRQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPD 378
Query: 323 AEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQ 380
AE+AL LNG+ +G Q++RLSWGRSP++KQS D G YYG Y YGYA P
Sbjct: 379 AEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYG-TPFYGGYGYASPLP 437
Query: 381 DPNM 384
PNM
Sbjct: 438 HPNM 441
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ V KV+ +R +G S+GYGFV F + +++ +G +
Sbjct: 138 WGKVVTIKVIRNRHSGVSEGYGFVEFFSHASAEKALQNFSGHVMPN-------------- 183
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ-----YGELVHVK 305
T + ++ + G + ++ +IFVG L VTD++L +F + G V +
Sbjct: 184 TDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIID 243
Query: 306 IPAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
G+ GFV+F + A++ +NG + IR+
Sbjct: 244 ANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRI 282
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 331 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 384
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 385 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 412
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 210/305 (68%), Gaps = 27/305 (8%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++LW+GDL WM+ES+I SIF TG VS K+IRNK T SEGYGF+EF +H AAE+V
Sbjct: 9 GTKTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQV 68
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
L+TFNG +P+T+Q FRLNWA +G G+ D D+++FVGDLA DVTDY LQE FR +
Sbjct: 69 LRTFNGCPIPNTDQIFRLNWAAFGVGKVTTDS--DYSVFVGDLAPDVTDYALQEHFRQFF 126
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
+SV+ AKV+TD TGRSKGYGFVRFG+E+E+ RS+TEM+G + ++RP+R+ A KK+ T
Sbjct: 127 ASVRSAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQT 186
Query: 252 G----QQYQKATYQN-------------TQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
+Q Q ++N +Q + DPNNTT+F+GGL V++D L+ +
Sbjct: 187 ATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVL 246
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS--------VLNGTQLGGQSIRLSWGR 346
FG++G++V+ KIP GK CGFVQF R AE A++ L G LGG +IR+SWGR
Sbjct: 247 FGRFGDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGR 306
Query: 347 SPSNK 351
S +++
Sbjct: 307 SSTSR 311
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 219/384 (57%), Gaps = 49/384 (12%)
Query: 37 HQTPVPPPVGWTPQP--------------VPPPSQQTQPYGVA-PDASSDGIRSLWIGDL 81
H +P+ P +P Q G +AS+ +++W+GDL
Sbjct: 39 HPSPMVMPHHMMYAAPPYPPYHHPHQFYHLPHHHHHHQSRGNKYQNASNTENKTIWVGDL 98
Query: 82 QPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP 141
WM+E+Y+ S F GE S KVIRNK T +EGYGF+EFVSH AE+VLQ NG M
Sbjct: 99 LHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSHDVAEKVLQELNGEAML 158
Query: 142 STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+ EQ FRLNWA++ GE+R ++GPD +IFVGDLA +VTD +L++ F Y SVK AKVV
Sbjct: 159 NAEQPFRLNWASFSTGEKRLENGPDLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVI 218
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
D TGRSKGYGFVRFGD+SE+ ++M EMNGV C R MRIGPA +K + Q
Sbjct: 219 DGNTGRSKGYGFVRFGDDSERSKAMLEMNGVKCCGRAMRIGPATPRKPSGYHQQ------ 272
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
GLD SVTDD L+ F YGE+V VKIP GK CGF+QF NR
Sbjct: 273 -------------------GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRE 313
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD---QAQWNGGGYYGFAQGYEAYGYAPP 378
AE+AL LNG+ +G Q++RLSWGR+P NKQ QW Y G Y PP
Sbjct: 314 NAEEALEKLNGSMIGKQTVRLSWGRNPGNKQPRGEYADQWVEPYYGGQYYNGYGYMMPPP 373
Query: 379 TQDPNMYY-----GGFPGYGTYQQ 397
DP MY GG+P Y +QQ
Sbjct: 374 V-DPRMYAAAPYGGGYPVYSGHQQ 396
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/325 (50%), Positives = 209/325 (64%), Gaps = 29/325 (8%)
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L+ ++E+Y++ F GE VS K+IRN+ T EGYGF+EFVSHA AERVLQT+N
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYN---- 66
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
+T+Q FRLNWA++G GERR D + +IFVGDLA D+TDY+LQE FRA Y SV+GAKVV
Sbjct: 67 -ATDQTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVV 125
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA-- 258
+D TGRSKGYGFV+F DE+E+ R+MTEMNGV CSTRPMRI A KK + A
Sbjct: 126 SDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPV 185
Query: 259 ----------TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
T Q E D NNT IFVG LD +V+++ LK F Q+GE+V VK+ +
Sbjct: 186 PKPVYPVPAYTAPVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQS 245
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS---------DQAQWN 359
GK CGFVQF R AE+A+ + +G Q +R+SWGR+ + +Q D QW+
Sbjct: 246 GKGCGFVQFGTRASAEEAIQKMQEKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS 305
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNM 384
YYG+ QGYEAY Y DP+
Sbjct: 306 --AYYGYGQGYEAYAYG-AAHDPSF 327
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/235 (65%), Positives = 178/235 (75%), Gaps = 14/235 (5%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
PPP W PQ PPS Q ++D IR+LWIGDLQ WM+E+++ F HTGE V
Sbjct: 38 PPPQMWNPQAAAPPSVQP--------TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMV 89
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERR 160
S KVIRNKQT EGYGFIEF SHAAAERVLQTFN +PS +Q FRLNWA+ +G++R
Sbjct: 90 SAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR 149
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DD PD+TIFVGDLAADVTDY+L ETFRA Y SVKGAKVV DR TGR+KGYGFVRF DES
Sbjct: 150 -DDSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDES 208
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNN 274
EQ+R+MTEMNGV CSTRPMRIGPAA+KK TG Q+ +YQ++ G +NDPNN
Sbjct: 209 EQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG---QRDSYQSSAAGVTTDNDPNN 260
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F A + AKV+ ++ TG+ +GYGF+ F + R +
Sbjct: 63 TLWIGDLQYWMDENFLYGCF-AHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQ 121
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
N + P Q + + + +D + TIFVG L VT
Sbjct: 122 TFNNAPIPSFP--------------DQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVT 167
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSI 340
D IL F Y + K+ + GFV+F++ + +A++ +NG + +
Sbjct: 168 DYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPM 227
Query: 341 RL 342
R+
Sbjct: 228 RI 229
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 181/269 (67%), Gaps = 43/269 (15%)
Query: 47 WTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI 106
W P PP Q V P +S+D +++LWIGDLQ WM+E+Y+ + F HTGE S KVI
Sbjct: 52 WAPNAQPP-----QQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVI 106
Query: 107 RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD 166
RNKQTN SEGYGF+EF+S A AERVLQTFNGT MP+ QNFRLNWAT+ +GE+R DD PD
Sbjct: 107 RNKQTNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPD 166
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
+TIFVGDLAADV+D+ L E FR Y+SVKGAKVV DRTTGR+KGYGFVRF DESEQ+R+M
Sbjct: 167 YTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAM 226
Query: 227 TEMNGVLCSTRPMRIGPAATKKAAT--------------------------GQQY----- 255
TEM GVLCSTRPMRIGPA+ K T Y
Sbjct: 227 TEMQGVLCSTRPMRIGPASNKNLGTQTSKAVHFIIYMVLVYFLSFFYELLPSMSYVIYLF 286
Query: 256 ------QKATYQNTQ-GSQGENDPNNTTI 277
A+YQN Q G+Q ENDPNNTT+
Sbjct: 287 ILFYFENAASYQNPQGGAQNENDPNNTTV 315
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F V KV+ ++ T +S+GYGF+ F + R +
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHT-GEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQ 133
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + GQ ++ + G + +D + TIFVG L V+
Sbjct: 134 TFNGTIMPN--------------GGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVS 179
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSI 340
D L VF +Y + K+ + GFV+FA+ + +A++ + G + +
Sbjct: 180 DHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPM 239
Query: 341 RL 342
R+
Sbjct: 240 RI 241
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/326 (49%), Positives = 208/326 (63%), Gaps = 26/326 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
RSL IG L WM E Y+ S F + E +S V RNK+T SE +G++ F HA A+++LQ
Sbjct: 51 RSLRIGGLLDWMNEEYLRSCFTRSPELLSAVVKRNKETGKSECFGYLNFADHATADQILQ 110
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
++NG +MP+ +++FRL+W T ++R DDG + I+VGDLA DVTD++L F++ Y S
Sbjct: 111 SYNGQKMPNADRDFRLSWVTNYPVQKRDDDGHN--IYVGDLAFDVTDFMLHHVFKSRYPS 168
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VK AK+ D GRSKGYGFV FGD +E+ ++MTEMNG CSTRPMR+GPA TK A
Sbjct: 169 VKHAKIAWDHFNGRSKGYGFVVFGDVNERRQAMTEMNGAYCSTRPMRVGPA-TKMA---- 223
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
G ++D NNT +FVGGLD VTD+ LK F YGEL VK+ AGK+CG
Sbjct: 224 -----------GKYSDSDSNNTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCG 272
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-DQAQWNGGGYYGFAQGYEA 372
FV + NR AE+A+ +LNG+ LG +IR+SWGRS +KQ DQ QWNG QG
Sbjct: 273 FVTYLNRASAEEAMRILNGSLLGDNTIRISWGRSLYHKQKHDQNQWNGE-----RQG-SG 326
Query: 373 YGYAPPTQDPNMY-YGGFPGYGTYQQ 397
GY +DP M+ Y G P Y Y Q
Sbjct: 327 PGYRSHPEDPKMHGYTGHPEYPHYPQ 352
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 170/216 (78%), Gaps = 8/216 (3%)
Query: 47 WTPQPVPPPSQQTQPYGVAP-DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
W QP Q P G P A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KV
Sbjct: 43 WPQQP-----QAGSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKV 97
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IRNKQT SEGYGFIEF++ AAERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD P
Sbjct: 98 IRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSP 155
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D+TIFVGDLA DVTDYVLQETFRA Y+SVKGAKVV DR TGR+KGYGFV+FGDESEQ+R+
Sbjct: 156 DYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRA 215
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
MTEMNGV CS+RPMRIGPAA K + QQ+ K+ Y+
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQFSKSKYE 251
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + + F A V KV+ ++ TG+S+GYGF+ F R +
Sbjct: 67 TLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG G Q + + + G + ++D + TIFVG L VT
Sbjct: 126 TYNGTAM---------------PNGAQNFRLNWA-SAGEKRQDDSPDYTIFVGDLAGDVT 169
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSI 340
D +L+ F +Y + K+ + GFV+F + + +A++ +NG + +
Sbjct: 170 DYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPM 229
Query: 341 RL 342
R+
Sbjct: 230 RI 231
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANR 320
Q N T+++G L + ++ + F GE+ VK+ K+ GF++F R
Sbjct: 58 QSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTR 117
Query: 321 TCAEQALSVLNGTQL--GGQSIRLSWGRSPSNKQSD 354
AE+ L NGT + G Q+ RL+W + +Q D
Sbjct: 118 PAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDD 153
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 165/333 (49%), Positives = 202/333 (60%), Gaps = 25/333 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++LW+GDL WMEESY+ + F H G S K+IRNKQT FSEGYGF+EFV A
Sbjct: 7 AETGEVKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRAT 66
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---DFTIFVGDLAADVTDYVLQ 184
AE L+T NGT MPS QNFRLNWA++G G G D ++FVGDL +V DY LQ
Sbjct: 67 AEHALKTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQ 126
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETF Y SV+ A+VVTD TGRSKG+GFVRFGDE E+ R++ EMNGV C +R MRI A
Sbjct: 127 ETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLA 186
Query: 245 ATKKAATGQQYQKATYQNTQGSQGEN-----DPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+K G GS G +P N+T+FVGGLDP++T+ L+T F +G
Sbjct: 187 IPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPENSTVFVGGLDPTLTEPDLRTHFEAFG 246
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
ELV+VKIPAGK CGFVQF R AE ++ LNGT +G +RLSW RS
Sbjct: 247 ELVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMGASRVRLSWVRSGGGGGGRHTGPF 306
Query: 360 GGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGY 392
GGG YG M YGG+P Y
Sbjct: 307 GGG--------SPYG---------MPYGGYPPY 322
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 206/325 (63%), Gaps = 37/325 (11%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L WM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLLWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
EQ++++TEMNG CSTRPMRIGP K K ++++ Q ++ +D NN+ +FVG
Sbjct: 203 EQIQALTEMNGAYCSTRPMRIGPVPKK---------KNSFRSKQWTESYHDANNSRLFVG 253
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
LD SVT + L F YGELV VK GK CGFV ++NR AE+A+ +LNG+QLGG++I
Sbjct: 254 QLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASAEEAIRMLNGSQLGGKAI 313
Query: 341 RLSWGRSPSNKQSDQAQWNGGGYYG 365
+LSWG ++K QAQ N GG +G
Sbjct: 314 KLSWGYPSADK---QAQRNSGGGFG 335
>gi|297737424|emb|CBI26625.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/173 (78%), Positives = 147/173 (84%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
MEE+Y+ F TGE VS KVIRNKQT EGYGFIE + AAAER+LQT+NGT MP++E
Sbjct: 1 MEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSE 60
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
QNFRLNWAT GAGERR DD PD+TIFVGDLA+DVTDYVLQETFR Y SVKGAKVVTDRT
Sbjct: 61 QNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRT 120
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
TGRSKGYGFVRFGDE EQLR+M EMNG+ CSTRPMRIGPAATKK GQQ+QK
Sbjct: 121 TGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQQFQK 173
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC--STRPMRIGPAATKKAAT 251
V KV+ ++ TG+ +GYGF+ + R + NG L S + R+ A
Sbjct: 16 VVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGA--- 72
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPAGK 310
G + +D + TIFVG L VTD +L+ F G Y + K+ +
Sbjct: 73 -------------GERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDR 119
Query: 311 RC------GFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
GFV+F + +A++ +NG + +R+
Sbjct: 120 TTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRI 157
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 288 DDILKTVFGQYGELVHVKIPAGK---RC---GFVQFANRTCAEQALSVLNGTQL--GGQS 339
++ L F Q GE+V VK+ K +C GF++ A R AE+ L NGT + Q+
Sbjct: 3 ENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSEQN 62
Query: 340 IRLSW 344
RL+W
Sbjct: 63 FRLNW 67
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/316 (46%), Positives = 191/316 (60%), Gaps = 48/316 (15%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R++W+GDLQ WM+E Y+ + FG +GE V
Sbjct: 109 DENRTIWVGDLQYWMDEGYLHNCFGPSGEHV----------------------------- 139
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F
Sbjct: 140 ---------MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKK 190
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKV+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++++
Sbjct: 191 YRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSS 250
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK
Sbjct: 251 GDSGSSPP-------RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGK 303
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQ 368
+CGFVQF NR AE+AL LNG+ +G Q++RLSWGRSP++KQS D G YYG
Sbjct: 304 QCGFVQFVNRPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYG-TP 362
Query: 369 GYEAYGYAPPTQDPNM 384
Y YGYA P PNM
Sbjct: 363 FYGGYGYASPLPHPNM 378
>gi|84453184|dbj|BAE71189.1| putative DNA binding protein [Trifolium pratense]
Length = 253
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 149/183 (81%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
++D +R+LWIGDLQ WM+E+Y+ F HTGE + KVIRNKQTN SEGYGF+EF S A A
Sbjct: 63 TADEVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVKVIRNKQTNQSEGYGFLEFTSRAGA 122
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER+LQ +NG MP+ QNFRLNWAT+ +GE+R DD PDFTIFVGDLAADVTDY L E FR
Sbjct: 123 ERILQQYNGNIMPNGGQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVTDYHLTEVFR 182
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+SVKGAKVV DRTTGR+KGYGFVRF DE EQ+R+M+EM GVLCSTRPMRIGPA+ K
Sbjct: 183 TRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPMRIGPASNKN 242
Query: 249 AAT 251
T
Sbjct: 243 LNT 245
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L + F V KV+ ++ T +S+GYGF+ F + R +
Sbjct: 69 TLWIGDLQYWMDENYLYQCFSHT-GEVGNVKVIRNKQTNQSEGYGFLEFTSRAGAERILQ 127
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+ NG I P GQ ++ + G + +D + TIFVG L VT
Sbjct: 128 QYNG--------NIMPNG------GQNFRLNWATFSSGEKRHDDSPDFTIFVGDLAADVT 173
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSI 340
D L VF +Y + K+ + GFV+FA+ +A+S + G + +
Sbjct: 174 DYHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADEGEQMRAMSEMQGVLCSTRPM 233
Query: 341 RL 342
R+
Sbjct: 234 RI 235
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/295 (48%), Positives = 185/295 (62%), Gaps = 16/295 (5%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A G +LWIGDL WM+E+Y+ F G S K+IRNKQT +SEGYGF+E A
Sbjct: 7 AEEAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRAT 66
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-------DFTIFVGDLAADVTD 180
AE L+ NGTQMP+ +QN+RLNWA++G G R G D +IFVGDL +V D
Sbjct: 67 AEHALRALNGTQMPNAQQNYRLNWASFGVGARFAGGGDGGATNSNDHSIFVGDLPPEVND 126
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++LQE F + Y+SV+ A+VVTD TGRSKG+GFVRF DES++ R++ EMNG+ C +R MR
Sbjct: 127 FMLQEVFSSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMR 186
Query: 241 IGPAATKKAAT--------GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
I A +K T G G ++ +N T+FVGGL S++D L+
Sbjct: 187 ISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTVFVGGLG-SISDAELR 245
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F YGELV++KIP GK CGFVQFA R+CAE A++ LN +G +RLSW RS
Sbjct: 246 IHFEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGTSRVRLSWVRS 300
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 148/184 (80%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +R+LWIGDLQ WMEE+Y+ + F GE +S K+IRNKQT EGYGFIEF SHA AE+
Sbjct: 64 DEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQ 123
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
VLQ +NG MP+ Q F+LNWAT GAGE+R DDG D+TIFVGDLA+DVTD +LQ+TF+A
Sbjct: 124 VLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAH 183
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y SVKGAKVV DR+TGRSKGYGFV+FGD EQ R+MTEMNG CS+RPMRIGPA+ KK
Sbjct: 184 YQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNI 243
Query: 251 TGQQ 254
GQQ
Sbjct: 244 GGQQ 247
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F + AK++ ++ TG+ +GYGF+ FG + + +
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQA-GELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQ 126
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV 286
NG + G Q K + + G + +D ++ TIFVG L V
Sbjct: 127 GYNGQMMPN---------------GNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDV 171
Query: 287 TDDILKTVF-GQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
TD IL+ F Y + K+ K GFV+F + +A++ +NG +
Sbjct: 172 TDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRP 231
Query: 340 IRL 342
+R+
Sbjct: 232 MRI 234
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSV 329
T+++G L + ++ L F Q GEL+ KI K+ GF++F + AEQ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 330 LNGTQL--GGQSIRLSWGRSPSNKQ 352
NG + G Q +L+W S + ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK 152
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 204/361 (56%), Gaps = 34/361 (9%)
Query: 43 PPVGWTPQP---VPPPSQQTQPYGVAPDASSDGI-------RSLWIGDLQPWMEESYIAS 92
PP W P P QQ Q A D S G RSL I +L PWM+E Y+ S
Sbjct: 5 PPRNWAMAPPYHYHGPPQQEQAAPAAEDESGAGSGEQEAESRSLRIRELFPWMDEDYLRS 64
Query: 93 IFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
F + E V+ + RN++T SEG+G++ F HA A+++L ++NG +MP+ +++F L+W
Sbjct: 65 CFTRSPELVTAVITRNRETKQSEGFGYLTFSDHATADQILHSYNGQKMPNADRDFSLSWV 124
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYG 212
Y A + I+VG L+ DVTD++L F+ Y SVK AKV+ + RSKGYG
Sbjct: 125 QYAAADHEH------AIYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYG 178
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
FV FGD +E ++MTEMNG CS+RPMRIGPA K TQG+ +++
Sbjct: 179 FVVFGDVNECTQAMTEMNGAYCSSRPMRIGPATFKSDF-----------RTQGTYPDSNR 227
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
NN+ +FVG LD VTD+ L F YGEL VKI GK CGFV +++R AE+AL++LNG
Sbjct: 228 NNSRLFVGQLDSCVTDEDLIKAFSPYGELT-VKIIEGKSCGFVTYSSRASAEEALTILNG 286
Query: 333 TQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-YGGFPG 391
+QLG I + W R KQ QWNG + YG P +DPN+ Y G PG
Sbjct: 287 SQLGDNIITVVWARHAPKKQD---QWNGVDHGHPQSSGPGYGCCP--EDPNIVGYTGHPG 341
Query: 392 Y 392
Y
Sbjct: 342 Y 342
>gi|413921125|gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 322
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 155/190 (81%), Gaps = 5/190 (2%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+R+LWIGDLQ WM+++YI F TGE + K+IR+K T +GYGFIEF+S AAAERVL
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT+NGT MP+ E FRLNWA+ AGE+R DD PD+TIFVGDLAADVTDYVLQETFRA Y
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKR-DDTPDYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKVVTD+ T R+KGYGFV+FGD +EQ R+MTEMNG+LCS+RPMRIGPAA KKA
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 253 QQ--YQKATY 260
Q+ YQ+A +
Sbjct: 297 QEKGYQQALH 306
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + D + F A V+ K++ D+ TG+ +GYGF+ F + R +
Sbjct: 122 TLWIGDLQYWMDDNYIYGCF-ASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVLQ 180
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + + P A+ G++ +D + TIFVG L VT
Sbjct: 181 TYNGTMMPNVEL---PFRLNWASAGEK--------------RDDTPDYTIFVGDLAADVT 223
Query: 288 DDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSI 340
D +L+ F Y + K+ K GFV+F + +A++ +NG + +
Sbjct: 224 DYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPM 283
Query: 341 RLSWGRSPSNKQSDQAQWNG 360
R+ +NK++ Q G
Sbjct: 284 RIG---PAANKKATVVQEKG 300
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 31/357 (8%)
Query: 24 MAYQQQSQQQQQQHQT----PVPPPVGWT----PQPVPPPSQQTQPYGVAPDASSDGIRS 75
M++Q Q QQ P P T P P P +P AP DG +
Sbjct: 1 MSFQNYEYQNQQDGAASAGAPTPADTNMTGQADPSPAPFAGTPGEPSAAAPQQGGDGKTT 60
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA + L +
Sbjct: 61 LWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAAAAGKAL-SL 119
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NGT MP+T + F+LNWAT G A R + GP+++IFVGDL +V +YVL F++ + S
Sbjct: 120 NGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 179
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A K G
Sbjct: 180 CKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGV 239
Query: 254 Q------------YQKAT--------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
Y A Y Q DPNNTT+FVGGL VT+D L++
Sbjct: 240 GPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRS 299
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 300 FFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 356
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/247 (52%), Positives = 168/247 (68%), Gaps = 10/247 (4%)
Query: 140 MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
MP+T++ F+LNWA+Y GE+R + D +IFVGDLA DVTD +L + F Y SVKGAKV
Sbjct: 3 MPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKV 62
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+ D TGRS+GYGFVRFGD++++ +MTEMNG CSTRP+RIGPA ++++
Sbjct: 63 IIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPP- 121
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q ++D N TI+VGGLDP+ T+D L+ F +YG+L VKIP GK+CGFVQF N
Sbjct: 122 ------RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVN 175
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAP 377
R AE+AL LNG+ +G Q++RLSWGRSP++KQS D G YYG Y YGYA
Sbjct: 176 RPDAEEALQGLNGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYG-TPFYGGYGYAS 234
Query: 378 PTQDPNM 384
P PNM
Sbjct: 235 PLPHPNM 241
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + + + +F V G KVI + T S GYGF+ F +
Sbjct: 31 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 90
Query: 134 TFNGTQMPSTEQNFRLNWAT--------YGAGERRQD-DGPDFTIFVGDLAADVTDYVLQ 184
NG + + R+ AT + R+ D D + TI+VG L + T+ L+
Sbjct: 91 EMNGAY--CSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNRTIYVGGLDPNATEDELR 148
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+ F A Y + K+ K GFV+F + + ++ +NG + +R+
Sbjct: 149 KAF-AKYGDLASVKIPV------GKQCGFVQFVNRPDAEEALQGLNGSTIGKQAVRL 198
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P E + F G+ S K+ KQ GF++FV+ AE LQ
Sbjct: 131 RTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQC------GFVQFVNRPDAEEALQ 184
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NG+ + +Q RL+W A ++ + D
Sbjct: 185 GLNGSTI--GKQAVRLSWGRSPASKQSRGD 212
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 209/361 (57%), Gaps = 36/361 (9%)
Query: 15 QYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDAS-S 70
QY Q QQ + QQ Q+Q P PPSQ P+ G A A+ +
Sbjct: 4 QYSQYDQQGGSTSPGGTNQQGQNQAA---------NPGQPPSQSPAPFNGNGSANGANGN 54
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I S++ GE V+ K+IR+K N S GY F++F S AA +
Sbjct: 55 DAKTTLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDK-FNGSAGYCFVDFTSPQAAAK 113
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L NGTQ+P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL F+
Sbjct: 114 AL-ALNGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQG 172
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+ S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A K
Sbjct: 173 RFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTATPKNK 232
Query: 250 ATGQQY----------QKATYQN---TQGSQGE-------NDPNNTTIFVGGLDPSVTDD 289
Q Q Y T G G DPNNTT+FVGGL VT+D
Sbjct: 233 GGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 292
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 293 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 352
Query: 350 N 350
N
Sbjct: 353 N 353
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 38/322 (11%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
AP+ +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY F+EF
Sbjct: 50 APNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYCFVEFT 108
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYV 182
S AA + L T NG+ +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YV
Sbjct: 109 SSEAASKAL-TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYV 167
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
L F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C RPMRI
Sbjct: 168 LVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRIS 227
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGE--------------------------------- 269
A K G YQ+ + N + G
Sbjct: 228 TATPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQ 287
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 288 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAIN 347
Query: 329 VLNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 348 QMQGYPIGNSRVRLSWGRSQNN 369
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 56/281 (19%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
Q D T+++G+L + + ++ F KV+ D+T+G + GY FV F
Sbjct: 53 QQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEFTSSE 111
Query: 221 EQLRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
+++T +NG V S R ++ A+ + + Y +IF
Sbjct: 112 AASKALT-LNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEY---------------SIF 155
Query: 279 VGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLN 331
VG L P V + +L ++F ++ KI + GFV+F + ++AL +
Sbjct: 156 VGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQ 215
Query: 332 GTQLGGQSIRLSWGRSPSNKQSD---QAQWNGG------------GYYGF---AQGYEAY 373
G G + +R+S +P N+ Q Q +G G+YG AQ AY
Sbjct: 216 GVYCGNRPMRISTA-TPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAY 274
Query: 374 G--YAPPTQ------DPN---MYYGGFPGYGTYQQPGSYQQ 403
G Y PP Q DPN ++ GG GY T + S+ Q
Sbjct: 275 GAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 315
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 185/286 (64%), Gaps = 12/286 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E++I ++ + GE V+ K+IR+K + + GY F++F S AAA + L +
Sbjct: 68 ALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDFSSTAAASKAL-S 126
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD-GPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NGT +P T + F+LNWA+ G R+DD P+F+IFVGDL +V +Y+L F++ Y S
Sbjct: 127 LNGTIIPGTTRLFKLNWASGGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYPS 186
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C +RP+RI AT K G
Sbjct: 187 CKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALTEMQGVYCGSRPIRIS-TATPKNKPGM 245
Query: 254 QYQKAT---------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
+ Y Q DPNNTT+FVGGL VT+D L++ F +GE+ +V
Sbjct: 246 SHINMMHMGMSPLGYYGAPQPMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYV 305
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
KIP GK CGFVQF R AE A+S + G +G +RLSWGRS +N
Sbjct: 306 KIPPGKGCGFVQFVQRHAAEMAISQMQGYPIGNSRVRLSWGRSQNN 351
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANR 320
QGEN T +++G L+P V + ++ V+ GE V+VK+ K G FV F++
Sbjct: 62 QGEN---KTALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIRDKFSGSNAGYCFVDFSST 118
Query: 321 TCAEQALSVLNGTQLGGQS--IRLSWG 345
A +ALS LNGT + G + +L+W
Sbjct: 119 AAASKALS-LNGTIIPGTTRLFKLNWA 144
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 189/289 (65%), Gaps = 22/289 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A SD +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S AA
Sbjct: 38 AGSDAKTTLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSG-NAGYCFVDFSSPAA 96
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQET 186
A + L T N T +P + + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL
Sbjct: 97 AAKAL-TLNATPIPGSSRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSL 155
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A
Sbjct: 156 FQSRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTATP 215
Query: 247 K-KAATG----QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K K+ATG Q+ DPNNTT+FVGGL VT+D L++ F +GE+
Sbjct: 216 KNKSATGGPPMNQF--------------TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 261
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 262 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 310
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 44/346 (12%)
Query: 39 TPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG-HT 97
TPV +G+ PP + + G +PD + +LW+G+L+PWM+E++I +F T
Sbjct: 24 TPVAAGMGY-----PPNANELTGPGNSPDGNKT---TLWMGELEPWMDENFIKGVFATAT 75
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA- 156
GE V+ KVIR+K + + GY F+EF S AA + L NGT +P++ + F+LNWA+ G
Sbjct: 76 GEQVNVKVIRDKSSG-NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGI 133
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
+RR D GP+F+IFVGDL +V ++VL F+A + S K AK++TD TG+S+GYGFVRF
Sbjct: 134 NDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRF 193
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG------------------------ 252
DE +Q R++ EM GV C RPMRI A K G
Sbjct: 194 TDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYG 253
Query: 253 --------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
Q Y A Q DPNNTT+FVGGL VT+D L++ F +GE+ +V
Sbjct: 254 VPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 313
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
KIP GK CGFVQF +R AE A++ + G +G +RLSWGRS +N
Sbjct: 314 KIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 46/243 (18%)
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
DG T+++G+L + + ++ F KV+ D+++G + GY FV F
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNA-GYCFVEFNSTDAA 105
Query: 223 LRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT----- 275
+++ +NG V S R ++ N G ND +
Sbjct: 106 SKALA-LNGTPVPNSARMFKL--------------------NWASGGGINDRRDDRGPEF 144
Query: 276 TIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALS 328
+IFVG L P V + +L ++F ++ KI + GFV+F + ++AL
Sbjct: 145 SIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALV 204
Query: 329 VLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGG 388
+ G G + +R+S +P N+ G YG QG++ P Q P +YG
Sbjct: 205 EMQGVYCGNRPMRISTA-TPKNRNH--------GPYGAQQGHQMPPAMHPHQ-PQAFYGV 254
Query: 389 FPG 391
PG
Sbjct: 255 PPG 257
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 24/132 (18%)
Query: 34 QQQHQTPVPPPVGWTPQP-----VPPPSQQTQPYGVAPDASSDGIR--------SLWIGD 80
QQ HQ P P QP VPP Q Q YG AP + ++++G
Sbjct: 234 QQGHQMP---PAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGG 290
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L ++ E + S F GE K+ K G GF++FV AAE + G
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQG--Y 342
Query: 141 PSTEQNFRLNWA 152
P RL+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 207/360 (57%), Gaps = 36/360 (10%)
Query: 26 YQQQSQQQQQQHQTPVPPP-VGWTP-QPVPPPSQQTQPY-------GVAPDASSDGIR-- 74
Y Q QQ+ +PPP G P QP P +QQ + AP S G +
Sbjct: 5 YGQFPNAQQEAAPGQIPPPQDGAAPGQPTDPSAQQQMAFQSPDPNVNAAPQPGSGGEQKT 64
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ +++ GE VS K+IR+K + + GY F++F S AA + LQ
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKALQ- 123
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+G MP++ + F+LNWAT G +RR D GP+++IFVGDL +V +YVL F++ + S
Sbjct: 124 LSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPS 183
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI------------ 241
K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI
Sbjct: 184 CKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPM 243
Query: 242 --------GPAATKKAATGQQYQKATYQNTQGSQGEN---DPNNTTIFVGGLDPSVTDDI 290
GPA Y Q Q N DPNNTT+FVGGL VT+D
Sbjct: 244 QGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 303
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 304 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 363
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 57/269 (21%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY FV F +++
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVS-VKMIRDKFSGSNAGYCFVDFSSPQAAAKAL- 122
Query: 228 EMNG--VLCSTRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+++G + STRP ++ G A ++ G +Y +IFVG
Sbjct: 123 QLSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEY--------------------SIFVG 162
Query: 281 GLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGT 333
L P V + +L ++F ++ KI + GFV+F++ ++AL+ + G
Sbjct: 163 DLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALTEMQGV 222
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYA--------------PPT 379
G + +R+S +P NK Q G G A P
Sbjct: 223 YCGNRPMRISTA-TPKNK-GLPMQGANMGMPGPAGPMGYPPMGGPPMPYYGQQQTPQPMN 280
Query: 380 Q--DPN---MYYGGFPGYGTYQQPGSYQQ 403
Q DPN ++ GG GY T + S+ Q
Sbjct: 281 QFTDPNNTTVFVGGLSGYVTEDELRSFFQ 309
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 193/338 (57%), Gaps = 31/338 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E+YI S+F E S K+IR+K T + GYGF+EF S A+ VL
Sbjct: 5 CKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIRDKVTGYPAGYGFLEFPSQQGAQAVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TFNG +P+T FRLNW GAG RR D D +IFVGDLA +V+D +L TF +S
Sbjct: 65 NTFNGQIVPNTIHRFRLNW---GAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFS 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVV D T KG+GFVRFGD+ E +++ MNGV CS+RPMR+ A + G
Sbjct: 122 SVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKTRG 181
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+Y E + NTT+F+GGLDPS T+D L+ FG GE++ VK+P G+ C
Sbjct: 182 IMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGC 241
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS----------------DQA 356
GFVQ+ + A+ A++ +NG + G +R +WGRS + + + A
Sbjct: 242 GFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAGSTTPAAGYYQQYPYQQTA 301
Query: 357 QWNGGGYYGFAQGYEAYGYAPPTQDPNMY----YGGFP 390
N GY F QGY Q P Y YGG+P
Sbjct: 302 YQNAYGYNYFPQGY--------AQQPGSYAYNAYGGYP 331
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 200/346 (57%), Gaps = 44/346 (12%)
Query: 39 TPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFG-HT 97
TPV +G+ PP + + G +PD + +LW+G+L+PWM+E++I +F T
Sbjct: 24 TPVAAGMGY-----PPNANELTGPGNSPDGNKT---TLWMGELEPWMDENFIKGVFATAT 75
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA- 156
GE V+ KVIR+K + + GY F+EF S AA + L NGT +P++ + F+LNWA+ G
Sbjct: 76 GEQVNVKVIRDKSSG-NAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGI 133
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
+RR D GP+F+IFVGDL +V ++VL F+A + S K AK++TD TG+S+GYGFVRF
Sbjct: 134 NDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRF 193
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG------------------------ 252
DE +Q R++ EM GV C RPMRI A K G
Sbjct: 194 TDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYG 253
Query: 253 --------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
Q Y A Q DPNNTT+FVGGL VT+D L++ F +GE+ +V
Sbjct: 254 VPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 313
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
KIP GK CGFVQF +R AE A++ + G +G +RLSWGRS +N
Sbjct: 314 KIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 46/243 (18%)
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
DG T+++G+L + + ++ F KV+ D+++G + GY FV F
Sbjct: 47 DGNKTTLWMGELEPWMDENFIKGVFATATGEQVNVKVIRDKSSGNA-GYCFVEFNSTDAA 105
Query: 223 LRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT----- 275
+++ +NG V S R ++ N G ND +
Sbjct: 106 SKALA-LNGTPVPNSARMFKL--------------------NWASGGGINDRRDDRGPEF 144
Query: 276 TIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALS 328
+IFVG L P V + +L ++F ++ KI + GFV+F + ++AL
Sbjct: 145 SIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALV 204
Query: 329 VLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGG 388
+ G G + +R+S +P N+ G YG QG++ P Q P +YG
Sbjct: 205 EMQGVYCGNRPMRISTA-TPKNRNH--------GPYGAQQGHQMPPAMHPHQ-PQAFYGV 254
Query: 389 FPG 391
PG
Sbjct: 255 PPG 257
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 24/131 (18%)
Query: 34 QQQHQTPVPPPVGWTPQP-----VPPPSQQTQPYGVAPDA--------SSDGIRSLWIGD 80
QQ HQ P P QP VPP Q Q YG AP + ++++G
Sbjct: 234 QQGHQMP---PAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVGG 290
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L ++ E + S F GE K+ K G GF++FV AAE + G
Sbjct: 291 LSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVHRHAAEMAINQMQG--Y 342
Query: 141 PSTEQNFRLNW 151
P RL+W
Sbjct: 343 PIGNSRVRLSW 353
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
++G +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 63 NEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAA 122
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L + NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 123 KAL-SLNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 181
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 182 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 241
Query: 248 KAATGQ------------------QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 242 NKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 301
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 302 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 361
Query: 350 N 350
N
Sbjct: 362 N 362
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 14/89 (15%)
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQF 317
QG++G+ TT+++G L+P + ++ ++ ++ Q GE V+VK+ K G FV F
Sbjct: 61 QGNEGK-----TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDF 115
Query: 318 ANRTCAEQALSVLNGTQL--GGQSIRLSW 344
++ A +ALS LNGT + + +L+W
Sbjct: 116 SSPAAAAKALS-LNGTPMPNTNRVFKLNW 143
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 28/322 (8%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP+
Sbjct: 99 KFSGSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPE 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 158 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQG 268
+EM GV C RPMRI A K G Y Q
Sbjct: 218 SEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQ 277
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAIN 337
Query: 329 VLNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 338 QMQGYPIGNSRVRLSWGRSQNN 359
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 193/322 (59%), Gaps = 28/322 (8%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E+++ +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP+
Sbjct: 99 KFSGSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPE 157
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 158 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 217
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQG 268
+EM GV C RPMRI A K G Y Q
Sbjct: 218 SEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQ 277
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAIN 337
Query: 329 VLNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 338 QMQGYPIGNSRVRLSWGRSQNN 359
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 191/303 (63%), Gaps = 22/303 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
A S+ ++LW+G+++PWM+E++I ++F +T E V KVIR++ + + GY F+EF +
Sbjct: 35 APSEAAKTLWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSG-NAGYCFVEFSTPE 93
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L NGT +P++++ F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 94 AAQKAL-ALNGTPVPNSQRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 152
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI A
Sbjct: 153 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTAT 212
Query: 246 TKKAAT------------------GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
K G A + Q DPNNTT+FVGGL VT
Sbjct: 213 PKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMNQFTDPNNTTVFVGGLSGYVT 272
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLSWGRS
Sbjct: 273 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRS 332
Query: 348 PSN 350
+N
Sbjct: 333 QNN 335
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 192/323 (59%), Gaps = 35/323 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGF 119
P G AP +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY F
Sbjct: 44 PGGQAPIQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYCF 102
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADV 178
+EF S AA + LQ NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 103 VEFTSSDAASKALQ-LNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEV 161
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+YVL F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 162 NEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRP 221
Query: 239 MRIGPAATKKAATG-------QQYQKATYQNTQGSQGE---------------------- 269
MRI A K G Q + QG G
Sbjct: 222 MRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMN 281
Query: 270 --NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQAL 327
DPNNTT+FVGGL VT+D L++ F +GE+ +V+IP GK CGFVQF +R AE A+
Sbjct: 282 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRHAAEMAI 341
Query: 328 SVLNGTQLGGQSIRLSWGRSPSN 350
+ + G +G +RLSWGRS +N
Sbjct: 342 NQMQGYPIGNSRVRLSWGRSQNN 364
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 115/278 (41%), Gaps = 53/278 (19%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
Q D T+++G+L + + ++ F KV+ D+T+G + GY FV F S
Sbjct: 51 QGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEF-TSS 108
Query: 221 EQLRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
+ ++NG V S R ++ A+ + + Y +IF
Sbjct: 109 DAASKALQLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEY---------------SIF 153
Query: 279 VGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLN 331
VG L P V + +L ++F ++ KI + GFV+F + ++AL +
Sbjct: 154 VGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQ 213
Query: 332 GTQLGGQSIRLSWGRSPSNKQSDQAQWNGG------------GYYGF---AQGYEAYG-- 374
G G + +R+S +P N+ Q +G G+YG AQ AYG
Sbjct: 214 GVYCGNRPMRISTA-TPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAP 272
Query: 375 YAPPTQ------DPN---MYYGGFPGYGTYQQPGSYQQ 403
Y PP Q DPN ++ GG GY T + S+ Q
Sbjct: 273 YNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 310
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 187/303 (61%), Gaps = 24/303 (7%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 360
Query: 348 PSN 350
+N
Sbjct: 361 QNN 363
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 194/325 (59%), Gaps = 26/325 (8%)
Query: 51 PVPPPSQQTQPYGVAPDASSDG---IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR 107
P P P Q AP ++ G +LW+G+L+PW++E++I +++ GE V+ K+IR
Sbjct: 39 PSPAPFQGNASGEPAPSSAQQGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 108 NKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGP 165
+K + + GY F++F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP
Sbjct: 99 DKFSGSNAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGP 157
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+F+IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+
Sbjct: 158 EFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRA 217
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT--------------------YQNTQG 265
+TEM GV C RPMRI A K G Y Q
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQP 277
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQ 325
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSN 350
A++ + G +G +RLSWGRS +N
Sbjct: 338 AINQMQGYPIGNSRVRLSWGRSQNN 362
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 193/323 (59%), Gaps = 29/323 (8%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P + QP + +G +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 46 PAPGEPTAAPVQP-------AQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 98
Query: 109 KQTNFSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGP 165
K + S GY F++F S AAA + L + NGT MP+T + F+LNWAT G A R D GP
Sbjct: 99 KFSGRSNAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGP 157
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+
Sbjct: 158 EYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRA 217
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT------------------YQNTQGSQ 267
++EM GV C RPMRI A K G Y Q
Sbjct: 218 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 277
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQAL 327
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A+
Sbjct: 278 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 337
Query: 328 SVLNGTQLGGQSIRLSWGRSPSN 350
+ + G +G +RLSWGRS +N
Sbjct: 338 NQMQGYPIGNSRVRLSWGRSQNN 360
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 187/303 (61%), Gaps = 24/303 (7%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 360
Query: 348 PSN 350
+N
Sbjct: 361 QNN 363
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 187/303 (61%), Gaps = 24/303 (7%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA +
Sbjct: 62 DAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAK 121
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F+
Sbjct: 122 AL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQ 180
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 240
Query: 249 AATGQQYQKAT---------------------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
G A Y Q DPNNTT+FVGGL VT
Sbjct: 241 KGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVT 300
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 301 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 360
Query: 348 PSN 350
+N
Sbjct: 361 QNN 363
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 185/298 (62%), Gaps = 23/298 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F + AAA + L T
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFTTPAAAAKAL-T 124
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V +YVL F++ +
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K G
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAG 244
Query: 253 QQYQKAT--------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
Y Q DPNNTT+FVGGL VT+D L+
Sbjct: 245 AGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 304
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 305 SFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 362
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 199/327 (60%), Gaps = 39/327 (11%)
Query: 61 PYGV-APDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYG 118
P GV AP+ +LW+G+L+PWM+E++I +F TGE V+ KVIR+K T+ + GY
Sbjct: 45 PGGVQAPNQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDK-TSGNAGYC 103
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAAD 177
F+EF S AA + L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +
Sbjct: 104 FVEFSSSDAASKAL-GLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPE 162
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE +Q R++ EM GV C R
Sbjct: 163 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNR 222
Query: 238 PMRIGPAATK-KAATGQQYQK------------------------ATYQNTQGS------ 266
PMRI A K ++ G YQ+ A Y G+
Sbjct: 223 PMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPG 282
Query: 267 QGEN---DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
Q N DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R A
Sbjct: 283 QQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAA 342
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSN 350
E A++ + G +G +RLSWGRS +N
Sbjct: 343 EMAINQMQGYPIGNSRVRLSWGRSQNN 369
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 54/281 (19%)
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
Q D T+++G+L + + ++ F KV+ D+T+G + GY FV F
Sbjct: 52 NQQDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNA-GYCFVEF-SS 109
Query: 220 SEQLRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
S+ +NG V S R ++ A+ + + Y +I
Sbjct: 110 SDAASKALGLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEY---------------SI 154
Query: 278 FVGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVL 330
FVG L P V + +L ++F ++ KI + GFV+F + ++AL +
Sbjct: 155 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEM 214
Query: 331 NGTQLGGQSIRLSWG--RSPSNKQSDQAQWNGG------------GYYGF---AQGYEAY 373
G G + +R+S ++ SN Q +G G+YG AQ AY
Sbjct: 215 QGVYCGNRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAY 274
Query: 374 G--YAPPTQ------DPN---MYYGGFPGYGTYQQPGSYQQ 403
G Y PP Q DPN ++ GG GY T + S+ Q
Sbjct: 275 GAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 315
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 15/148 (10%)
Query: 6 PSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWT-PQPVPPPSQQTQPYGV 64
P S+ YQQ H M QQ + P P G P PP QQ +
Sbjct: 231 PKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQF-T 289
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P+ ++ +++G L ++ E + S F GE K+ K G GF++FV
Sbjct: 290 DPNNTT-----VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK------GCGFVQFVH 338
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWA 152
AAE + G P RL+W
Sbjct: 339 RHAAEMAINQMQG--YPIGNSRVRLSWG 364
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 194/333 (58%), Gaps = 35/333 (10%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P Q P G + S D +LW+G+L+PW++E+++ S++ GE V+ K+IR+K
Sbjct: 284 PAPFAQQGGNPDGSSGSVSGDAKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKF 343
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY FI+F S AAA + L + NG+ +P+T + F+LNWA+ G +RR D GP+++I
Sbjct: 344 SG-NAGYCFIDFSSPAAAAKAL-SLNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSI 401
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G S+GYGFVRF DE +Q R++TEM
Sbjct: 402 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEM 461
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K A G Q + G
Sbjct: 462 QGVYCGNRPMRISTATPKNKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYG 521
Query: 270 ------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF
Sbjct: 522 GGYGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 581
Query: 318 ANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
R AE A++ + G +G +RLSWGRS +N
Sbjct: 582 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 614
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 65/277 (23%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY F+ F + ++++
Sbjct: 308 TLWMGELEPWIDENFVRSVWFGMGEQVN-VKMIRDKFSGNA-GYCFIDFSSPAAAAKALS 365
Query: 228 EMNGVLC--STRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+NG + + RP ++ G A ++ G +Y +IFVG
Sbjct: 366 -LNGSMIPNTARPFKLNWASGGGLADRRDDRGPEY--------------------SIFVG 404
Query: 281 GLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGT 333
L P V + +L ++F ++ KI + GFV+FA+ ++AL+ + G
Sbjct: 405 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGV 464
Query: 334 QLGGQSIRLSWGRSPSNKQSD---------QAQWNGGGYYGFAQGYEAYGYAPPTQ---- 380
G + +R+S +P NK Q N G A G + G PP Q
Sbjct: 465 YCGNRPMRISTA-TPKNKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGG 523
Query: 381 -----------DPN---MYYGGFPGYGTYQQPGSYQQ 403
DPN ++ GG GY T + S+ Q
Sbjct: 524 YGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 560
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 192/332 (57%), Gaps = 34/332 (10%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P Q G + + D +LW+G+L+PW++E++I S++ GE V+ K+IR+K
Sbjct: 49 PAPFAQQGAGVEGSSGSVTGDAKTTLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKF 108
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY FI+F S AAA + L + NG+ +P+T + F+LNWA+ G +RR D GP+F+I
Sbjct: 109 SG-NAGYCFIDFTSPAAAAKAL-SLNGSMIPNTTRPFKLNWASGGGLADRRDDRGPEFSI 166
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G S+GYGFVRF +E +Q R++TEM
Sbjct: 167 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEM 226
Query: 230 NGVLCSTRPMRIGPAATKKAATG-------------------------------QQYQKA 258
GV C RPMRI A K + G
Sbjct: 227 QGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGPPMAG 286
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
Y Q DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF
Sbjct: 287 YYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 346
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
R AE A++ + G +G +RLSWGRS +N
Sbjct: 347 QRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 378
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY F+ F + ++++
Sbjct: 73 TLWMGELEPWIDENFIRSVWFGMGEQVN-VKMIRDKFSGNA-GYCFIDFTSPAAAAKALS 130
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG + +TRP ++ A+ A + + + +IFVG L P
Sbjct: 131 -LNGSMIPNTTRPFKLNWASGGGLADRRDDRGPEF---------------SIFVGDLGPE 174
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+FA ++AL+ + G G +
Sbjct: 175 VNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNR 234
Query: 339 SIRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 235 PMRISTA-TPKNK 246
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 176/296 (59%), Gaps = 33/296 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+LW+GD+ WM+E+YI ++FG E + K+IR+K T GYGF+EF SH A RVL
Sbjct: 19 RTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHEGAARVLN 78
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
FN +P ++FRLNWAT+G RR + GP+F++FVGDLA +++D LQ F A Y S
Sbjct: 79 DFNNVPIPGVGRSFRLNWATFGIAARRPETGPEFSLFVGDLAPEISDDQLQAFFGARYRS 138
Query: 194 VKGAKVVTDRTTGRSK----------------------GYGFVRFGDESEQLRSMTEMNG 231
V+ AKVVTD T S+ GYGFVRFGDE+E +MTEM G
Sbjct: 139 VRSAKVVTDAATAASRGTCSSAINKHLFSHFALLCSADGYGFVRFGDETECYSAMTEMQG 198
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG-----------ENDPNNTTIFVG 280
++ +R +R+ A KK+++ G G + DP+NTTIFVG
Sbjct: 199 MMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSNTTIFVG 258
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD +V +D L+ F +GELV+V++P GK CGFVQF +R+CAE A+ ++G +G
Sbjct: 259 NLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAMLRVHGKTIG 314
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--------PAGKRCGFVQFANRT 321
++ + T++VG +D + ++ + +FG E+ +VKI PAG GFV+F +
Sbjct: 14 SEADKRTLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGY--GFVEFKSHE 71
Query: 322 CAEQALSVLNGTQL--GGQSIRLSWG 345
A + L+ N + G+S RL+W
Sbjct: 72 GAARVLNDFNNVPIPGVGRSFRLNWA 97
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 188/304 (61%), Gaps = 30/304 (9%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 51 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFQSPDAATKAL- 108
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 109 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 168
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT- 251
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 169 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 228
Query: 252 ----GQQ-----------YQKATYQNTQGSQGE----------NDPNNTTIFVGGLDPSV 286
GQ Q+ + QG G DPNNTT+FVGGL V
Sbjct: 229 GFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFTDPNNTTVFVGGLSGYV 288
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
T+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLSWGR
Sbjct: 289 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGR 348
Query: 347 SPSN 350
S +N
Sbjct: 349 SQNN 352
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 188/310 (60%), Gaps = 29/310 (9%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
++D +LW+G+L+PW++E+++ S++ GE V+ K+IR+K + + GY FI+F + A
Sbjct: 69 GAADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSG-NAGYCFIDFTTPEA 127
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQET 186
A + L + NG+ +P+T + F+LNWA+ G +RR D GP+F+IFVGDL +V +YVL
Sbjct: 128 AAKAL-SLNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSL 186
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV C RPMRI A
Sbjct: 187 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATP 246
Query: 247 KKAATGQQYQKATYQNTQGSQGEN--------------------------DPNNTTIFVG 280
K + G A G N DPNNTT+FVG
Sbjct: 247 KNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVG 306
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
GL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +
Sbjct: 307 GLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 366
Query: 341 RLSWGRSPSN 350
RLSWGRS +N
Sbjct: 367 RLSWGRSQNN 376
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q Q A Q GS G D + TT+++G L+P + ++ +++V+ GE V+VK+ K G
Sbjct: 55 QGQGAMEQGQGGSTGAAD-SKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSG 113
Query: 314 -----FVQFANRTCAEQALSVLNGTQLGGQS--IRLSW 344
F+ F A +ALS LNG+ + S +L+W
Sbjct: 114 NAGYCFIDFTTPEAAAKALS-LNGSMIPNTSRPFKLNW 150
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY F+ F ++++
Sbjct: 76 TLWMGELEPWIDENFVRSVWFGMGEQVN-VKMIRDKFSGNA-GYCFIDFTTPEAAAKALS 133
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG + ++RP ++ A+ A + + + +IFVG L P
Sbjct: 134 -LNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEF---------------SIFVGDLGPE 177
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+F++ ++AL+ + G G +
Sbjct: 178 VNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNR 237
Query: 339 SIRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 238 PMRISTA-TPKNK 249
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 199/327 (60%), Gaps = 42/327 (12%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFI 120
Y AP A++D ++LW+G+L+PWM+E+++ ++ GE V+ KVIR++Q+ + GY F+
Sbjct: 32 YSGAPTANNDA-KTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSG-NAGYCFV 89
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVT 179
EF S AA + LQ NG+ +P++++ F+LNWA+ G +RR + GP+F+IFVGDL +V
Sbjct: 90 EFNSAEAANKALQ-LNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVN 148
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
++VL F+A + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RPM
Sbjct: 149 EFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPM 208
Query: 240 RIGPAATKKAATGQQYQK-------------ATYQN-----------------------T 263
RI AT K + QQY A QN
Sbjct: 209 RIS-TATPKTRSHQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGFNQPAPPAANNFNAAM 267
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
Q DPNNTT+FVGGL VT+D L++ F +G++ +VKIP GK CGFVQF +R A
Sbjct: 268 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAA 327
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSN 350
E A++ + G +G +RLSWGRS +N
Sbjct: 328 EMAINQMQGYPIGNSRVRLSWGRSQNN 354
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + +++ ++ V KV+ DR +G + GY FV F + +E
Sbjct: 44 TLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSGNA-GYCFVEF-NSAEAANKAL 101
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG V S R ++ A+ + + + +IFVG L P
Sbjct: 102 QLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEF---------------SIFVGDLGPE 146
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+F + ++AL + G G +
Sbjct: 147 VNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNR 206
Query: 339 SIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG 387
+R+S + + K Q++ G +G A P Q NM +G
Sbjct: 207 PMRIS---TATPKTRSHQQYSAQGQHG-----GPMPMAAPAQQQNMNWG 247
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa Japonica Group]
Length = 323
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 120 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 179
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 180 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 239
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 240 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 299
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 300 AANKKNMGTQQ 310
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + A++G ++A +D TIFVG L VT
Sbjct: 189 NFNGRMMLNVDQLF---KLNWASSGAGERRAA----------DDGPEHTIFVGDLASDVT 235
Query: 288 DDILKTVFG------QYGELVHVKIPA-GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D +L+ F + ++V K+ K GFV+F + +A++ +NG L + +
Sbjct: 236 DSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQM 295
Query: 341 RL 342
RL
Sbjct: 296 RL 297
>gi|34395215|dbj|BAC83714.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
gi|50508741|dbj|BAD31317.1| RNA Binding Protein-like [Oryza sativa Japonica Group]
Length = 206
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 5 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 64
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 65 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 125 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 184
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 185 AANKKNMGTQQ 195
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 14 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 73
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
NG +L + ++ A++G ++A +D TIFVG L
Sbjct: 74 NFNGRMMLNVDQLFKL-----NWASSGAGERRAA----------DDGPEHTIFVGDLASD 118
Query: 286 VTDDILKTVFG------QYGELVHVKIPA-GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VTD +L+ F + ++V K+ K GFV+F + +A++ +NG L +
Sbjct: 119 VTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTR 178
Query: 339 SIRL 342
+RL
Sbjct: 179 QMRL 182
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 191/305 (62%), Gaps = 24/305 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S +G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K + + GY F++F + AAA
Sbjct: 61 SGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L + NGT MP+T + F+LNWAT G + R+D P+++IFVGDL +V +YVL
Sbjct: 121 AKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP 239
Query: 247 KK----AATGQ----------QYQKATYQNTQGSQGE-------NDPNNTTIFVGGLDPS 285
K A GQ Y A G G DPNNTT+FVGGL
Sbjct: 240 KNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWG
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
Query: 346 RSPSN 350
RS +N
Sbjct: 360 RSQNN 364
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica Group]
Length = 323
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVS 124
P D IRSLWIGDLQ WM+ESY+++ F G+ V S KVIRNKQ+ SEGYGFIEF S
Sbjct: 120 PAPGGDEIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQS 179
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ-DDGPDFTIFVGDLAADVTDYVL 183
HAAAE L FNG M + +Q F+LNWA+ GAGERR DDGP+ TIFVGDLA+DVTD +L
Sbjct: 180 HAAAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 239
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG STR MR+GP
Sbjct: 240 EEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGP 299
Query: 244 AATKKAATGQQ 254
AA KK QQ
Sbjct: 300 AANKKNMGTQQ 310
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + L F + V KV+ ++ +G S+GYGF+ F + ++
Sbjct: 129 SLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHAAAEYALA 188
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG + A++G ++A +D TIFVG L VT
Sbjct: 189 NFNGRMMLNVDQLF---KLNWASSGAGERRAA----------DDGPEHTIFVGDLASDVT 235
Query: 288 DDILKTVFG------QYGELVHVKIPA-GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D +L+ F + ++V K+ K GFV+F + +A++ +NG L + +
Sbjct: 236 DSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQM 295
Query: 341 RL 342
RL
Sbjct: 296 RL 297
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 191/305 (62%), Gaps = 24/305 (7%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S +G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K + + GY F++F + AAA
Sbjct: 61 SGEGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L + NGT MP+T + F+LNWAT G + R+D P+++IFVGDL +V +YVL
Sbjct: 121 AKAL-SVNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP 239
Query: 247 KK----AATGQ----------QYQKATYQNTQGSQGE-------NDPNNTTIFVGGLDPS 285
K A GQ Y A G G DPNNTT+FVGGL
Sbjct: 240 KNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 299
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWG
Sbjct: 300 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
Query: 346 RSPSN 350
RS +N
Sbjct: 360 RSQNN 364
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 188/305 (61%), Gaps = 31/305 (10%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFTTPEAATKAL- 86
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 87 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 147 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 206
Query: 249 ------------AATGQQYQKATYQNTQGSQ--GEN---------DPNNTTIFVGGLDPS 285
G Q+ + QG G N DPNNTT+FVGGL
Sbjct: 207 GFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGY 266
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLSWG
Sbjct: 267 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 326
Query: 346 RSPSN 350
RS +N
Sbjct: 327 RSQNN 331
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 183/300 (61%), Gaps = 25/300 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-G 124
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
NG+ +P++ + F+LNWA+ G R+ GP+F++FVGDL +VT++VL + F+ Y+S
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQRGPEFSVFVGDLGPEVTEFVLVQLFQNKYAST 184
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K + G
Sbjct: 185 KSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTATPKNKSGGPG 244
Query: 255 YQKAT------------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
Y Q DPNNTT+FVGGL VT+D
Sbjct: 245 GPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDE 304
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 305 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 28/193 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + +V K++ D+ +G + GY FV F +++
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVN-VKMIRDKFSGSNAGYCFVDFASPDAAAKALG 124
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG L S RP ++ A+ A +Q +G + ++FVG L P
Sbjct: 125 -LNGSLIPNSNRPFKLNWASGGGLADRRQ---------RGPE-------FSVFVGDLGPE 167
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VT+ +L +F +Y KI + + GFV+FA+ ++AL+ + G G +
Sbjct: 168 VTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNR 227
Query: 339 SIRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 228 PMRISTA-TPKNK 239
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALS 328
TT+++G L+P + ++ +++++ GE V+VK+ K G FV FA+ A +AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKALG 124
Query: 329 VLNGTQL--GGQSIRLSW 344
LNG+ + + +L+W
Sbjct: 125 -LNGSLIPNSNRPFKLNW 141
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 188/305 (61%), Gaps = 31/305 (10%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSG-NAGYCFVEFTTPEAATKAL- 86
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 87 GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 146
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 147 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 206
Query: 249 ------------AATGQQYQKATYQNTQGSQ--GEN---------DPNNTTIFVGGLDPS 285
G Q+ + QG G N DPNNTT+FVGGL
Sbjct: 207 GFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGY 266
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLSWG
Sbjct: 267 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 326
Query: 346 RSPSN 350
RS +N
Sbjct: 327 RSQNN 331
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 193/320 (60%), Gaps = 42/320 (13%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+D ++LW+G+L+PWM+E++I I+ GE V+ KVIR++Q+ + GY F+EF S AA
Sbjct: 43 NDSAKTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSG-NAGYCFVEFPSSEAA 101
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NG+ +P++++ F+LNWA+ G +RR + GP+++IFVGDL +V ++VL F
Sbjct: 102 TKAL-GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLF 160
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+A + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI AT
Sbjct: 161 QARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRIS-TATP 219
Query: 248 KAATGQQY------------QKATYQNTQGSQGE-------------------------N 270
K + QQY QN Q
Sbjct: 220 KTRSHQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFT 279
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL VT+D L++ F +G++ +VKIP GK CGFVQF +R AE A++ +
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAINQM 339
Query: 331 NGTQLGGQSIRLSWGRSPSN 350
G +G +RLSWGRS +N
Sbjct: 340 QGYPIGNSRVRLSWGRSQNN 359
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 187/306 (61%), Gaps = 32/306 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F + E V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG-NAGYCFVEFQSPEAATKAL- 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+Q+P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 108 NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 167
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 168 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 227
Query: 253 QQYQKATYQ--------------NTQGSQG--------------ENDPNNTTIFVGGLDP 284
+ N G QG DPNNTT+FVGGL
Sbjct: 228 GFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSG 287
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSW 344
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLSW
Sbjct: 288 YVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 347
Query: 345 GRSPSN 350
GRS +N
Sbjct: 348 GRSQNN 353
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 188/307 (61%), Gaps = 33/307 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F + E V+ KVIR+K + + GY F+EF S AA + L
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSG-NAGYCFVEFQSPEAATKAL- 107
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+Q+P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 108 NMNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 167
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 168 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 227
Query: 253 QQY---------------QKATYQNTQGSQG--------------ENDPNNTTIFVGGLD 283
Q+ N G QG DPNNTT+FVGGL
Sbjct: 228 GFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLS 287
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RLS
Sbjct: 288 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 347
Query: 344 WGRSPSN 350
WGRS +N
Sbjct: 348 WGRSQNN 354
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 179/305 (58%), Gaps = 28/305 (9%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
S G +LW+GDL PWM+E +I + GE V+ K+I++K T GY F+EF S A
Sbjct: 8 SSGGSTLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSSSDVAA 67
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
++L+ NGT +P T F+LNWA +G G P+F+IFVGDLA ++ D +L + F
Sbjct: 68 KLLELVNGTLIPGTHCFFKLNWA-FGGGLSPLYVLPEFSIFVGDLAHEINDILLMQVFHE 126
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y SVK A+VV D TTG KGYGFVRFG E++Q +S+ ++ G + +RP+R+ A K
Sbjct: 127 RYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPVRVSIATPKHK 186
Query: 250 ATGQQYQKA--------TYQNTQGSQ-------------------GENDPNNTTIFVGGL 282
A G +Y + G+ G NDP N+TIF+G L
Sbjct: 187 ALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYRQPVYMHQHLGGNDPTNSTIFIGAL 246
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
++T+D L+ F +GE+V+ KIP GKRCGFVQF +R AE A+ ++G +GG ++RL
Sbjct: 247 PATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFIHRQSAEMAIQEMDGKVIGGSALRL 306
Query: 343 SWGRS 347
SWGRS
Sbjct: 307 SWGRS 311
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + ++ +++T+R + SV K++ D++TG GY FV F + +
Sbjct: 13 TLWMGDLLPWMDEHFIRQTWRLLGESVT-VKMIKDKSTGSLAGYCFVEFSSSDVAAKLLE 71
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG L P + K + G +IFVG L +
Sbjct: 72 LVNGTLI--------PGT-------HCFFKLNWAFGGGLSPLYVLPEFSIFVGDLAHEIN 116
Query: 288 DDILKTVFGQ-YGELVHVKIPAG------KRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D +L VF + Y + ++ K GFV+F + +Q+L L G +G + +
Sbjct: 117 DILLMQVFHERYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLVDLQGQMIGSRPV 176
Query: 341 RLSWGRSPSNKQSDQAQWNGGGYYGFAQGY-EAYGYAPPTQDPNMY 385
R+S +P +K GYY Y +A G P +Y
Sbjct: 177 RVSIA-TPKHKALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIY 221
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 188/303 (62%), Gaps = 24/303 (7%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+G +LW+G+L+PW++E++I +I+ GE V+ K+IR+K + + GY F++F + AAA +
Sbjct: 59 EGKTTLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVDFATPAAAAK 118
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L + NGT MP+T + F+LNWAT G + R+D P+++IFVGDL +V +YVL F+
Sbjct: 119 AL-SVNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVLVSLFQ 177
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 178 SRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKN 237
Query: 249 --------------AATGQQYQKAT-------YQNTQGSQGENDPNNTTIFVGGLDPSVT 287
A Y A Y Q DPNNTT+FVGGL VT
Sbjct: 238 KGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGLSGYVT 297
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 298 EDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRS 357
Query: 348 PSN 350
+N
Sbjct: 358 QNN 360
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 191/315 (60%), Gaps = 30/315 (9%)
Query: 64 VAPDASSDGIRSLW------IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY 117
+AP +S + S+W +G+L+PW++E++I +++ GE V+ K+IR+K + + GY
Sbjct: 74 IAP-VNSFCLSSMWRNACDGMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGY 132
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLA 175
F++F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL
Sbjct: 133 CFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLG 191
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C
Sbjct: 192 PEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCG 251
Query: 236 TRPMRIGPAATKKAATGQQYQKAT--------------------YQNTQGSQGENDPNNT 275
RPMRI A K G Y Q DPNNT
Sbjct: 252 NRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNT 311
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
T+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +
Sbjct: 312 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPI 371
Query: 336 GGQSIRLSWGRSPSN 350
G +RLSWGRS +N
Sbjct: 372 GNSRVRLSWGRSQNN 386
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/317 (41%), Positives = 192/317 (60%), Gaps = 40/317 (12%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ ++LW+G+L+PWM+E+++ ++F +GE V+ KVIR++ + + GY F+EF + AA
Sbjct: 38 SESSKTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASG-NAGYCFVEFNTADAA 96
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L T NG+ +P++ + F+LNWA+ G +RR D P+F+IFVGDL +V ++VL F
Sbjct: 97 TKAL-TLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEFVLVSLF 155
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+A + S K AK++TD TG+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 156 QARFPSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRISTATPK 215
Query: 248 KAATGQQYQKATYQNTQGSQGE----------------------------------NDPN 273
+ QY + + + G DPN
Sbjct: 216 TRS--HQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQFTDPN 273
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G
Sbjct: 274 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 333
Query: 334 QLGGQSIRLSWGRSPSN 350
+G +RLSWGRS +N
Sbjct: 334 PIGNSRVRLSWGRSQNN 350
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/293 (43%), Positives = 181/293 (61%), Gaps = 21/293 (7%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG 137
+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S AAA + L + NG
Sbjct: 92 MGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKAL-SLNG 150
Query: 138 TQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
T MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F++ + S K
Sbjct: 151 TPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCK 210
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A K G
Sbjct: 211 SAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVVP 270
Query: 256 QKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
Y Q DPNNTT+FVGGL VT+D L++ F
Sbjct: 271 GGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQG 330
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 331 FGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 383
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 143/181 (79%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDL WM+ +Y+ + F HTGE +S KVIRNKQT SEGYGF+EF S AAE+VLQ
Sbjct: 29 KTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQ 88
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NGT MP+TEQ FRLNWA++ GERR + G D +IFVGDL++DVTD +LQETF + Y S
Sbjct: 89 NYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETFASRYPS 148
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
VKGAKVV D TGRSKGYGFVRFGD++E+ R+++EMNG CS RPMR+G A +K++ Q
Sbjct: 149 VKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNRPMRVGVATPRKSSGYQ 208
Query: 254 Q 254
Q
Sbjct: 209 Q 209
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 26/184 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI+VGDL + L F A V KV+ ++ TG+S+GYGFV F + +
Sbjct: 30 TIWVGDLHYWMDGNYLNNCF-AHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVLQ 88
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
NG + +P R+ A+ + G + ++ +IFVG L
Sbjct: 89 NYNGTAMPNTEQPFRLNWASF----------------SMGERRSEAGSDHSIFVGDLSSD 132
Query: 286 VTDDILKTVFGQY-----GELVHVKIPAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VTD +L+ F G V + G K GFV+F + +A+S +NG +
Sbjct: 133 VTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAISEMNGAYCSNR 192
Query: 339 SIRL 342
+R+
Sbjct: 193 PMRV 196
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQAL 327
N TI+VG L + + L F GE++ +K+ K+ GFV+F +R AE+ L
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVL 87
Query: 328 SVLNGTQLGG--QSIRLSW 344
NGT + Q RL+W
Sbjct: 88 QNYNGTAMPNTEQPFRLNW 106
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 193/324 (59%), Gaps = 23/324 (7%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P +P A DG +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 34 PSPAPFAGTPGEPSAAATQQGGDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 93
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L NGT MP+T + F+LNWAT G A R + GP+
Sbjct: 94 KFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLADRGRDERGPE 152
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 153 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 212
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQ------------YQKAT--------YQNTQGS 266
+EM GV C RPMRI A K G Y A Y Q
Sbjct: 213 SEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPM 272
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQA 326
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A
Sbjct: 273 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 332
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSN 350
++ + G +G +RLSWGRS +N
Sbjct: 333 INQMQGYPIGNSRVRLSWGRSQNN 356
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SDG +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 62 SDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAA 121
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 122 KALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 240
Query: 248 KAATGQQYQKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 241 NKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 300
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 301 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 360
Query: 350 N 350
N
Sbjct: 361 N 361
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 181/299 (60%), Gaps = 24/299 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E++I S++ G V+ K+IR+K + + GY F++F + +A R L
Sbjct: 82 TLWMGELEPWIDENFIRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDSAARAL-A 140
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y
Sbjct: 141 LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 200
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAAT 251
S K AK+++D +G S+GYGFVRF DE++Q +++ EM GV C RPMRI A K K+
Sbjct: 201 SCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 260
Query: 252 GQQYQKATYQNTQGSQGE--------------------NDPNNTTIFVGGLDPSVTDDIL 291
Q G QG DPNNTT+FVGGL VT+D L
Sbjct: 261 AGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 320
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 321 RSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 379
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 193/324 (59%), Gaps = 23/324 (7%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P +P A DG +LW+G+L+PW++E++I +++ GE V+ K+IR+
Sbjct: 34 PSPAPFAGTPGEPSAAATQQGGDGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRD 93
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPD 166
K + + GY F++F S AAA + L NGT MP+T + F+LNWAT G A R + GP+
Sbjct: 94 KFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLADRGRDERGPE 152
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++IFVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++
Sbjct: 153 YSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRAL 212
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQ------------YQKAT--------YQNTQGS 266
+EM GV C RPMRI A K G Y A Y Q
Sbjct: 213 SEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQPM 272
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQA 326
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A
Sbjct: 273 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 332
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSN 350
++ + G +G +RLSWGRS +N
Sbjct: 333 INQMQGYPIGNSRVRLSWGRSQNN 356
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 191/335 (57%), Gaps = 40/335 (11%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFV 101
PP G P P S Q Q +LW+G+L+PWM+E++I +F +GE V
Sbjct: 28 PPSGDMSAPPPTGSSQDQ-----------AKTTLWMGELEPWMDENFIKGVFLSASGETV 76
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERR 160
+ KVIR+K + + GY F+EF + AA + L NG +P++ + F+LNWA+ G +RR
Sbjct: 77 NVKVIRDKNSG-NAGYCFVEFQTADAATKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRR 134
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D GP+++IFVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE+
Sbjct: 135 DDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDEN 194
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATG-------------------------QQY 255
+Q R++ EM GV C RPMRI A K Q +
Sbjct: 195 DQQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGF 254
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
Y DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFV
Sbjct: 255 AYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 314
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
QF +R AE A++ + G +G +RLSWGRS +N
Sbjct: 315 QFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 349
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 191/307 (62%), Gaps = 22/307 (7%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S
Sbjct: 57 VPQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFAS 116
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYV 182
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YV
Sbjct: 117 PAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYV 175
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI- 241
L F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 176 LVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS 235
Query: 242 -------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLD 283
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 236 TATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 295
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLS
Sbjct: 296 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 355
Query: 344 WGRSPSN 350
WGRS +N
Sbjct: 356 WGRSQNN 362
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 191/307 (62%), Gaps = 22/307 (7%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + + GY F++F S
Sbjct: 57 VPQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFAS 116
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYV 182
AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YV
Sbjct: 117 PAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYV 175
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI- 241
L F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 176 LVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS 235
Query: 242 -------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGLD 283
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 236 TATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLS 295
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLS
Sbjct: 296 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 355
Query: 344 WGRSPSN 350
WGRS +N
Sbjct: 356 WGRSQNN 362
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 193/321 (60%), Gaps = 33/321 (10%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGY 117
+ P +AP+ D ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY
Sbjct: 28 SAPAPIAPNP--DAPKTLWMGEMEGWMDETFIKNVFQTVMGESVQVKVIRDRNSG-NAGY 84
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAA 176
F+EF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL
Sbjct: 85 CFVEFQTPEAAQKAL-GLNGTPVPNSNRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 143
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V ++VL F++ + S K AK++TD TG+S+GYGFVRF DE++ R++ EM GV C
Sbjct: 144 EVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGN 203
Query: 237 RPMRIGPAATKKAATGQQYQKAT---------------------------YQNTQGSQGE 269
RPMRI A K+ + QY Y Q
Sbjct: 204 RPMRISTATPKQRSHHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQQYNPIQPMNQF 263
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 264 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 323
Query: 330 LNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 324 MQGYPIGNSRVRLSWGRSQNN 344
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 190/334 (56%), Gaps = 46/334 (13%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
VPPP+ TQ +LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 36 VPPPAGPTQ---------DQAKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 86
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NGT +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 87 SG-NAGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 144
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 145 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 204
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ-----------GSQG---------- 268
GV C RPMRI A K G QG
Sbjct: 205 QGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGGAGAG 264
Query: 269 ------------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQ
Sbjct: 265 GGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQ 324
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
F +R AE A++ + G +G +RLSWGRS +N
Sbjct: 325 FVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 358
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 27/193 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ F + KV+ D+ +G + GY FV F +++
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNA-GYCFVEFATPDAATKALG 108
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG V S+R ++ A+ + + Y +IFVG L P
Sbjct: 109 -LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEY---------------SIFVGDLGPE 152
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+F++ ++AL + G G +
Sbjct: 153 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNR 212
Query: 339 SIRLSWGRSPSNK 351
+R+S +P N+
Sbjct: 213 PMRISTA-TPKNR 224
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 191/321 (59%), Gaps = 34/321 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 62 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 120
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 121 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 179
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 180 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 239
Query: 239 MRIGPAATKKAATGQQYQKAT-----------------------------YQNTQGSQGE 269
MRI AT K T Q A + Q
Sbjct: 240 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 298
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 299 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 358
Query: 330 LNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 359 MQGYPIGNSRVRLSWGRSQNN 379
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 194/340 (57%), Gaps = 57/340 (16%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
VPPP+ TQ +LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 55 VPPPTGPTQ---------DQAKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 105
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NGT +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 106 SG-NAGYCFVEFATPDAATKAL-GLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 163
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 164 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 223
Query: 230 NGVLCSTRPMRIGPAATKK---------------------------------------AA 250
GV C RPMRI A K AA
Sbjct: 224 QGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGGGAAA 283
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G + AT N DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK
Sbjct: 284 AGGNFNPATQMNQ-----FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 338
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
CGFVQF +R AE A++ + G +G +RLSWGRS +N
Sbjct: 339 GCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 378
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 27/193 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ F + KV+ D+ +G + GY FV F +++
Sbjct: 69 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNA-GYCFVEFATPDAATKALG 127
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG V S+R ++ A+ + + Y +IFVG L P
Sbjct: 128 -LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEY---------------SIFVGDLGPE 171
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+F++ ++AL + G G +
Sbjct: 172 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNR 231
Query: 339 SIRLSWGRSPSNK 351
+R+S +P N+
Sbjct: 232 PMRISTA-TPKNR 243
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 192/313 (61%), Gaps = 32/313 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
AS++ ++LW+G+++ WM+E++I ++F E V KVIR++ + + GY FIEF +
Sbjct: 34 ASNEAPKTLWMGEMEGWMDENFIKNVFQTVLAENVQVKVIRDRHSG-NAGYCFIEFGTPE 92
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L + NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 93 AAQKAL-SLNGTPVPNSTRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 151
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DE++Q R++ EM GV C RPMRI A
Sbjct: 152 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTAT 211
Query: 246 TKK------AATGQQY----------------------QKATYQNTQGSQGENDPNNTTI 277
K A GQ Q A + Q DPNNTT+
Sbjct: 212 PKTRSHQYGGAHGQGANPMIPPVPGHPGPMWGAPAYYGQGAAFNPMQPMNQFTDPNNTTV 271
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G
Sbjct: 272 FVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGN 331
Query: 338 QSIRLSWGRSPSN 350
+RLSWGRS +N
Sbjct: 332 SRVRLSWGRSQNN 344
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 191/321 (59%), Gaps = 34/321 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT-----------------------------YQNTQGSQGE 269
MRI AT K T Q A + Q
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 266
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 326
Query: 330 LNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 327 MQGYPIGNSRVRLSWGRSQNN 347
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 191/331 (57%), Gaps = 38/331 (11%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQ 110
PP + P P SSD ++ LW+G+L+PWM+E++I +F GE V+ KVIR+K
Sbjct: 88 PPSGDMSAP---PPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKN 144
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTI 169
+ + GY F+EF + AA + L NG +P++ + F+LNWA+ G +RR D GP+++I
Sbjct: 145 SG-NAGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSI 202
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F+A + S K AK++TD +G+S+GYGFVRF DE++Q R++ EM
Sbjct: 203 FVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEM 262
Query: 230 NGVLCSTRPMRIGPAATKKAATG------------------------------QQYQKAT 259
GV C RPMRI A K Q +
Sbjct: 263 QGVYCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGFAYGG 322
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Y DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +
Sbjct: 323 YNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 382
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
R AE A++ + G +G +RLSWGRS +N
Sbjct: 383 RHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 413
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 192/321 (59%), Gaps = 34/321 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF + AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFATPEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------------YQNTQGSQGEN-- 270
MRI AT K T Q A Y Q N
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYSGFNPMQPMNQF 266
Query: 271 -DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 326
Query: 330 LNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 327 MQGYPIGNSRVRLSWGRSQNN 347
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 178/267 (66%), Gaps = 16/267 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E++I+S+F GE K+IR+K T + GYGF+EF + A++VL
Sbjct: 5 CKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQQVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T+NG +P+T FR+NW GAG RR + D +IFVGDLA DVTD +L TF + ++
Sbjct: 65 DTYNGQVIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRFT 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV+GAKVV D T SKG+GFVRFG + E +++ MNGV CS+RPMR+ AT+++ +
Sbjct: 122 SVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRV-SVATERSKSR 180
Query: 253 QQYQKATYQNTQGSQG--ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
Q QG+ G E + NTT+FVGGLDPS T+D L+ FG GE+V VK+P G+
Sbjct: 181 Q----------QGAFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGR 230
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGG 337
CGFVQ+ ++ AE A++ +NGT + G
Sbjct: 231 GCGFVQYTSKEAAEVAITQMNGTVISG 257
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 191/322 (59%), Gaps = 27/322 (8%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPP + P +DG +LW+G+L+PW++E++I +++ GE V+ K+IR+K +
Sbjct: 41 PPPGEPNS--APVPQQGADGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSG 98
Query: 113 FSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTI 169
S GY F++F S AAA + L NGT MP+T + F+LNWAT G A R D GP+++I
Sbjct: 99 RSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSI 157
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM
Sbjct: 158 FVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEM 217
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K G G G
Sbjct: 218 QGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQ 277
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAIN 337
Query: 329 VLNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 338 QMQGYPIGNSRVRLSWGRSQNN 359
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 187/309 (60%), Gaps = 35/309 (11%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F T E V+ KVIR+K + + GY F+EF + AA + L
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSATTETVNVKVIRDKNSG-NAGYCFVEFQTPEAATKAL- 106
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG+ +P++ ++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 107 ALNGSGVPNSSRHFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 166
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT- 251
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 167 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 226
Query: 252 ---------------------GQQYQKATYQNTQGSQGEN---------DPNNTTIFVGG 281
G Q Y G G N DPNNTT+FVGG
Sbjct: 227 GFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGGGGGGGFNPATQMNQFTDPNNTTVFVGG 286
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
L VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +R
Sbjct: 287 LSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVR 346
Query: 342 LSWGRSPSN 350
LSWGRS +N
Sbjct: 347 LSWGRSQNN 355
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 187/312 (59%), Gaps = 37/312 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK---------QTNF-----SEGYGFI 120
+LW+G+L+PW++E++I +++ GE V+ K+IR+K ++N + GY F+
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGKQHESSRSNIDIPRSNAGYCFV 125
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADV 178
+F + AAA + L T +GT +P+T + F+LNWA+ G A R++ GP+F+IFVGDL +V
Sbjct: 126 DFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEV 184
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RP
Sbjct: 185 NEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRP 244
Query: 239 MRIGPAATKKAATGQQYQKAT--------------------YQNTQGSQGENDPNNTTIF 278
MRI A K G Y Q DPNNTT+F
Sbjct: 245 MRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVF 304
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G
Sbjct: 305 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 364
Query: 339 SIRLSWGRSPSN 350
+RLSWGRS +N
Sbjct: 365 RVRLSWGRSQNN 376
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 191/322 (59%), Gaps = 27/322 (8%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PPP + P +DG +LW+G+L+PW++E++I +++ GE V+ K+IR+K +
Sbjct: 41 PPPGEPNA--APVPQQGADGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSG 98
Query: 113 FSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTI 169
S GY F++F S AAA + L NGT MP+T + F+LNWAT G A R D GP+++I
Sbjct: 99 RSNAGYCFVDFASPAAAAKALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSI 157
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL +V +YVL F++ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM
Sbjct: 158 FVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEM 217
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-------------------- 269
GV C RPMRI A K G G G
Sbjct: 218 QGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAPQPMNQ 277
Query: 270 -NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++
Sbjct: 278 FTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAIN 337
Query: 329 VLNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 338 QMQGYPIGNSRVRLSWGRSQNN 359
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/301 (44%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
++G +LW+G+L+PW++E++I +++ GE V+ K+IR+K + + GY F++F S AAA
Sbjct: 62 NEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFASPAAAA 121
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL F
Sbjct: 122 KALSL-NGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + S K AK++TD +G S+GYGFVRF DE++Q R++TEM GV C RPMRI A K
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPK 240
Query: 248 KAATGQ------------------QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G Y Q DPNNTT+FVGGL VT+D
Sbjct: 241 NKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 300
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 301 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 360
Query: 350 N 350
N
Sbjct: 361 N 361
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 171/274 (62%), Gaps = 26/274 (9%)
Query: 31 QQQQQQHQTPVPPP--------------VGWTPQPVPPPSQQTQPYGVAP--------DA 68
+++ Q +P PPP + + P P PP Q + + +A
Sbjct: 36 EEENQPKTSPTPPPHWMRYPPTVIIPHQMMYAPPPFPPYHQYPNHHHLHHQSRGNKHQNA 95
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +++W+GDL WM+E+Y+ S F G E VS KVIRNK SEGYGF+EF SH
Sbjct: 96 FNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHD 155
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-QDDGPDFTIFVGDLAADVTDYVLQE 185
A++VL+ FNGT MP+T+Q FRLNWA++ GE+R +++GPD +IFVGDL+ DV+D +L E
Sbjct: 156 VADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHE 215
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y SVK AKVV D TGRSKGYGFVRFGDE+E+ ++MTEMNGV CS+R MRIGPA
Sbjct: 216 TFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT 275
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
+K G Q Q N ++ E D NTT+ V
Sbjct: 276 PRK-TNGYQQQGGYMPNGTLTRPEGDIMNTTVIV 308
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 27/198 (13%)
Query: 157 GERRQD--DGPDFTIFVGDLAADVTDYVLQETFRA-VYSSVKGAKVVTDRTTGRSKGYGF 213
G + Q+ +G + TI+VGDL + + L +F + + KV+ ++ G S+GYGF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 214 VRFGDESEQLRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
V F + + E NG + +P R+ A+ +TG++ + EN+
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNWAS---FSTGEK------------RLENN 193
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQ-YGELVHVKIPA------GKRCGFVQFANRTCAE 324
+ +IFVG L P V+D++L F + Y + K+ K GFV+F +
Sbjct: 194 GPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERT 253
Query: 325 QALSVLNGTQLGGQSIRL 342
+A++ +NG + +++R+
Sbjct: 254 KAMTEMNGVKCSSRAMRI 271
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 191/321 (59%), Gaps = 34/321 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGF 119
P + +++ ++LW+G+++ WM+E++I ++F GE V KVIR++ + + GY F
Sbjct: 30 PTALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVIRDRNSG-NAGYCF 88
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG-ERRQDDGPDFTIFVGDLAADV 178
IEF S AA++ L NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V
Sbjct: 89 IEFASAEAAQKALN-LNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPEYSIFVGDLGPEV 147
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
++VL F++ + S K AK++TD TG+S+GYGFVRF DE +Q R++ EM GV C RP
Sbjct: 148 NEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRP 207
Query: 239 MRIGPAATKKAATGQQYQKAT-----------------------------YQNTQGSQGE 269
MRI AT K T Q A + Q
Sbjct: 208 MRIS-TATPKTRTHQYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYSGFNPMQPMNQF 266
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++
Sbjct: 267 TDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQ 326
Query: 330 LNGTQLGGQSIRLSWGRSPSN 350
+ G +G +RLSWGRS +N
Sbjct: 327 MQGYPIGNSRVRLSWGRSQNN 347
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 173/282 (61%), Gaps = 15/282 (5%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGH-TGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
D + ++LW+GD+QP E Y+ S+F G+ + K+IR++ GYGFI+F +H
Sbjct: 9 DENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNH 68
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+ VL + NG + T +RLNW GAG +R + P++++FVGDL+ +VTD L+
Sbjct: 69 ETAQLVLDSLNGKPIEGTSLRYRLNW---GAGGKRIEQAPEYSVFVGDLSPEVTDAELKA 125
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF Y+SV GAKVVT+ TG SK +GF+RFGDE E+ ++T MNG C RP+R+ PA
Sbjct: 126 TFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPAT 185
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
+ + GQ AT DP+NTT+FVGG++ SVT+ +L+ F GE+ V
Sbjct: 186 KRTSVQGQTGAHAT-----------DPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVT 234
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
P G+ C FV FA+R AE ++ + GT + G +RLSWG+S
Sbjct: 235 TPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKS 276
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/293 (43%), Positives = 180/293 (61%), Gaps = 15/293 (5%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ +S +LW+G+L P++ E+ + I+ GE V+ K+IR++ + + GY F+EF S A
Sbjct: 91 ETASHNNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPA 150
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + + NGT +P T + F+LNWA+ G +RR+ P+F+IFVGDL +VT+ +L
Sbjct: 151 SAMKAM-SLNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLS 209
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ Y S K AK++ D T S+GYGFVRF DE++Q R++TEM GV C RPMRI A
Sbjct: 210 LFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMAT 269
Query: 246 TKKAATGQQYQKAT-----------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
K + Y Y Q DP NTT+FVGGL VT++ L+ +
Sbjct: 270 PK--SKNHMYSPMNMMHIGLQPVGFYGAPQPVNQFTDPTNTTVFVGGLSGYVTEEELRFL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F +GE+++VKIP GK CGFVQF NR AE A++ + G LG IRLSWGRS
Sbjct: 328 FQNFGEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWGRS 380
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 191/308 (62%), Gaps = 23/308 (7%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFV 123
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F
Sbjct: 57 VPQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFA 116
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDY 181
S AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +Y
Sbjct: 117 SPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEY 175
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
VL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 176 VLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRI 235
Query: 242 --------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGL 282
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 236 STATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGL 295
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RL
Sbjct: 296 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 355
Query: 343 SWGRSPSN 350
SWGRS +N
Sbjct: 356 SWGRSQNN 363
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 191/308 (62%), Gaps = 23/308 (7%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFV 123
P +++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F
Sbjct: 57 VPQQANEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFA 116
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDY 181
S AAA + L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +Y
Sbjct: 117 SPAAAAKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEY 175
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
VL F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI
Sbjct: 176 VLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRI 235
Query: 242 --------GPAATKKAATGQQYQKATYQNT----QGSQGE-------NDPNNTTIFVGGL 282
GP+ A G Y G G DPNNTT+FVGGL
Sbjct: 236 STATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGL 295
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RL
Sbjct: 296 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 355
Query: 343 SWGRSPSN 350
SWGRS +N
Sbjct: 356 SWGRSQNN 363
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 192/314 (61%), Gaps = 35/314 (11%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHA 126
AS++ ++LW+G+++ WM+E++I ++F V KVIR++ + + GY FIEF +
Sbjct: 35 ASNEAAKTLWMGEMEGWMDENFIKNVFQTVLSVDVQVKVIRDRNSG-NAGYCFIEFPTPD 93
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ L T NGT +P++ + F+LNWA+ G +RR D GP+++IFVGDL +V ++VL
Sbjct: 94 AAQKAL-TLNGTPVPNSSRVFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVS 152
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F++ + S K AK++TD TG+S+GYGFVRF DESEQ R++ EM GV C R MRI A
Sbjct: 153 LFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCGNRAMRISTAT 212
Query: 246 TKKAATGQQYQKATYQNTQ-------------------GSQGEN----------DPNNTT 276
K + Q+ + TQ G Q N DPNNTT
Sbjct: 213 PKSRS--HQFGHHGHGATQMMPPIAGHPGPMWGVPSYYGQQPFNQHIAPMNQFTDPNNTT 270
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G
Sbjct: 271 VFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIG 330
Query: 337 GQSIRLSWGRSPSN 350
+RLSWGRS +N
Sbjct: 331 NSRVRLSWGRSQNN 344
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 180/301 (59%), Gaps = 26/301 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + +A R LQ
Sbjct: 72 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPESATRALQ- 130
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y+
Sbjct: 131 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQGKYT 190
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K + G
Sbjct: 191 SCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 253 QQYQKAT-----------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
Y Q DPNNTT+FVGGL VT+D
Sbjct: 251 GGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 370
Query: 350 N 350
N
Sbjct: 371 N 371
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 187/308 (60%), Gaps = 36/308 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F E V+ KVIR+K + + GY F+EF S AA L
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSG-NAGYCFVEFQSPEAATNAL- 102
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P+++++F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 103 GMNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 162
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI AT K
Sbjct: 163 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS-TATPKNRGN 221
Query: 253 QQYQKATYQN------------------------------TQGSQGENDPNNTTIFVGGL 282
+ + N TQ +Q DPNNTT+FVGGL
Sbjct: 222 HGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGYGGFNPATQMNQ-FTDPNNTTVFVGGL 280
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RL
Sbjct: 281 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRL 340
Query: 343 SWGRSPSN 350
SWGRS +N
Sbjct: 341 SWGRSQNN 348
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 58/272 (21%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ F + KV+ D+ +G + GY FV F E +
Sbjct: 45 TLWMGELEPWMDENFIKGVFMSAAHETVNVKVIRDKNSGNA-GYCFVEF-QSPEAATNAL 102
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
MNG V S R ++ A+ + + Y +IFVG L P
Sbjct: 103 GMNGKPVPNSQRSFKLNWASGGGLVDRRDDRGPEY---------------SIFVGDLGPE 147
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F ++ KI + GFV+F++ ++AL + G G +
Sbjct: 148 VNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNR 207
Query: 339 SIRLSWGRSPSNKQSD-------------------QAQWNGGGYYGFAQGYEAYGYAPPT 379
+R+S +P N+ + Q WNGGG QG+ G+ P T
Sbjct: 208 PMRISTA-TPKNRGNHGFGGQGHHNGGPMMGGMPQQQMWNGGG----MQGFGYGGFNPAT 262
Query: 380 Q-----DPN---MYYGGFPGYGTYQQPGSYQQ 403
Q DPN ++ GG GY T + S+ Q
Sbjct: 263 QMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQ 294
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 187/307 (60%), Gaps = 28/307 (9%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
S G +LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F + AA
Sbjct: 57 SAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFSTPEAAA 115
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L + NG +P++ + F+LNWA+ G A R + GP+++IFVGDL +VT++VL + F
Sbjct: 116 KAL-SLNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLF 174
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ Y S K AK+++D +G S+GYGFVRF DE++Q +++T+M GV C RPMRI A K
Sbjct: 175 QNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTATPK 234
Query: 248 KAATGQQYQKAT------------------------YQNTQGSQGENDPNNTTIFVGGLD 283
+ G Y Q DPNNTT+FVGGL
Sbjct: 235 NKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLS 294
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLS
Sbjct: 295 GYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 354
Query: 344 WGRSPSN 350
WGRS +N
Sbjct: 355 WGRSQNN 361
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 187/319 (58%), Gaps = 44/319 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L +
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL-S 124
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQ------------------DDGPDFTIFVGDLA 175
NG+ +P++ + F+LNWA+ G +RRQ + GP+F++FVGDL
Sbjct: 125 LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPEFSVFVGDLG 184
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+VT++VL + F+ Y+S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C
Sbjct: 185 PEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCG 244
Query: 236 TRPMRIGPAATKKAATGQQYQKAT------------------------YQNTQGSQGEND 271
RPMRI A K + G Y Q D
Sbjct: 245 NRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYGTPQPMNQFTD 304
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLN 331
PNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ +
Sbjct: 305 PNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQ 364
Query: 332 GTQLGGQSIRLSWGRSPSN 350
G +G +RLSWGRS +N
Sbjct: 365 GYPIGNSRVRLSWGRSQNN 383
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + +V K++ D+ +G + GY FV F ++++
Sbjct: 66 TLWMGELEPWIDENFVRSIWYNMGETVN-VKMIRDKFSGSNAGYCFVDFASPDAAAKALS 124
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKAT----YQNTQGSQGENDPNNTTIFVGG 281
+NG L S RP ++ A+ A +Q + + N S+ E P ++FVG
Sbjct: 125 -LNGSLIPNSNRPFKLNWASGGGLADRRQVSQVSKYKHMANESNSRDERGPE-FSVFVGD 182
Query: 282 LDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQ 334
L P VT+ +L +F +Y KI + + GFV+FA+ ++AL+ + G
Sbjct: 183 LGPEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVY 242
Query: 335 LGGQSIRLSWGRSPSNK 351
G + +R+S +P NK
Sbjct: 243 CGNRPMRISTA-TPKNK 258
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALS 328
TT+++G L+P + ++ +++++ GE V+VK+ K G FV FA+ A +ALS
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKALS 124
Query: 329 VLNGTQL--GGQSIRLSW 344
LNG+ + + +L+W
Sbjct: 125 -LNGSLIPNSNRPFKLNW 141
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 173/265 (65%), Gaps = 12/265 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++LW+GD+Q +E++I S+F E K+IR+K T + GYGF+EF + A++VL
Sbjct: 5 CKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIRDKVTGYPAGYGFLEFPTQQGAQQVL 64
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+T NG +P+T FR+NW GAG RR + D +IFVGDLA DVTD +L TF A ++
Sbjct: 65 ETLNGQLIPNTMHRFRMNW---GAGGRRIETSDDHSIFVGDLAPDVTDELLLATFNARFT 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+V+GAKVV D T SKG+GFVRFG + E +++ MNGV CS+RPMR+ AT++ +
Sbjct: 122 TVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRV-SVATERNKSR 180
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
QQ + GE + NTT+FVGGLDP+ T+D L+ FG G +V VK+P G+ C
Sbjct: 181 QQ--------VGFTMGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGRGC 232
Query: 313 GFVQFANRTCAEQALSVLNGTQLGG 337
GFVQ++++ AE A+S +NG + G
Sbjct: 233 GFVQYSSKEAAEVAISQMNGQAVSG 257
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 182/302 (60%), Gaps = 28/302 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFASPDAAAKAL-N 122
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R + GP+F+IFVGDL +VT++VL + F+ Y
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYP 182
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA-- 250
S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K +
Sbjct: 183 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 242
Query: 251 ----------------------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
G Y Q DPNNTT+FVGGL VT+
Sbjct: 243 PGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 302
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 303 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 362
Query: 349 SN 350
+N
Sbjct: 363 NN 364
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 183/301 (60%), Gaps = 27/301 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L T
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFSSPDAAAKAL-T 130
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R + GP+++IFVGDL +VT++VL + F+ Y
Sbjct: 131 LNGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYP 190
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K + G
Sbjct: 191 STKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGG 250
Query: 253 QQYQKAT-----------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
Y Q DPNNTT+FVGGL VT+D
Sbjct: 251 PGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTED 310
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +
Sbjct: 311 ELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQN 370
Query: 350 N 350
N
Sbjct: 371 N 371
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 178/304 (58%), Gaps = 29/304 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + A R LQ
Sbjct: 73 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDQATRALQ- 131
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+F+IFVGDL +V +YVL F+ Y+
Sbjct: 132 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNEYVLMSLFQGKYT 191
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K +
Sbjct: 192 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGA 251
Query: 253 QQYQKAT--------------------------YQNTQGSQGENDPNNTTIFVGGLDPSV 286
Y Q DPNNTT+FVGGL V
Sbjct: 252 GGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYV 311
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
T+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGR
Sbjct: 312 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 371
Query: 347 SPSN 350
S +N
Sbjct: 372 SQNN 375
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 26/193 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY FV F + + R++
Sbjct: 73 TLWMGELEPWIDENFVRSVWFGMGYQVN-VKMIRDKFSGSNAGYCFVDFENPDQATRAL- 130
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG + S R ++ A+ A S+ + P +IFVG L P
Sbjct: 131 QLNGQVIPNSNRQFKLNWASGGGLA-------------DRSRDDRGPE-FSIFVGDLGPE 176
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F G+Y KI + + GFV+FA+ ++AL + G G +
Sbjct: 177 VNEYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNR 236
Query: 339 SIRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 237 PMRISTA-TPKNK 248
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 180/308 (58%), Gaps = 33/308 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + AA R LQ
Sbjct: 84 TLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRALQ- 142
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+ Y
Sbjct: 143 LNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQNKYP 202
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K + G
Sbjct: 203 SCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTATPKNKSGG 262
Query: 253 Q-------------------------QYQKAT-----YQNTQGSQGENDPNNTTIFVGGL 282
Y Y Q DPNNTT+FVGGL
Sbjct: 263 AAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFTDPNNTTVFVGGL 322
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RL
Sbjct: 323 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRL 382
Query: 343 SWGRSPSN 350
SWGRS +N
Sbjct: 383 SWGRSQNN 390
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 186/302 (61%), Gaps = 22/302 (7%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-GYGFIEFVSHAAA 128
++G +LW+G+L+PW++E+++ +++ GE V+ K+IR+K + S GY F++F S AAA
Sbjct: 61 NEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFASPAAA 120
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ L NGT MP+T + F+LNWAT G A R D GP+++IFVGDL +V +YVL
Sbjct: 121 AKALSL-NGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSL 179
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F++ + S K AK++TD +G S+GYGFVRF DE++Q R+++EM GV C RPMRI A
Sbjct: 180 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATP 239
Query: 247 KKAATGQQYQKAT------------------YQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
K G Y Q DPNNTT+FVGGL VT+
Sbjct: 240 KNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTE 299
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 300 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 359
Query: 349 SN 350
+N
Sbjct: 360 NN 361
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 184/305 (60%), Gaps = 31/305 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+LW+G+L+PW++E+++ SI+ + GE V+ K+IR+K + + GY F++F S AA + L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSG-NAGYCFVDFASPDAAAKAL-N 122
Query: 135 FNGTQMPSTEQNFRLNWATYGA-GERRQ----DDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P++ + F+LNWA+ G +RRQ + GP+F+IFVGDL +VT++VL + F+
Sbjct: 123 LNGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQN 182
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
Y S K AK+++D +G S+GYGFVRF E +Q +++TEM GV C RPMRI A K
Sbjct: 183 KYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNK 242
Query: 250 A------------------------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+ G Y Q DPNNTT+FVGGL
Sbjct: 243 SGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNNTTVFVGGLSGY 302
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWG
Sbjct: 303 VTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 362
Query: 346 RSPSN 350
RS +N
Sbjct: 363 RSQNN 367
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 190/325 (58%), Gaps = 36/325 (11%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P G + DG +LW+G+L+ W++E++I +I+ GE V+ K+IR+K + + GY F+
Sbjct: 49 PSGSPGNQQPDGKTTLWMGELEGWIDENFIRNIWYQMGEQVNVKMIRDKFSGANAGYCFV 108
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADV 178
+F + AAA + L T NGT MP+T++ F+LNWA+ G A R++ GP+F+IFVGDL +V
Sbjct: 109 DFATPAAAAKAL-TVNGTPMPNTQRPFKLNWASGGGLADRSREERGPEFSIFVGDLGPEV 167
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+YVL F++ + S K AK++TD TG S+GYGFVRF DE++Q R+++EM GV C RP
Sbjct: 168 NEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRP 227
Query: 239 MRIGPAATKKAATGQQYQKATYQNTQGSQGE----------------------------- 269
MRI A K A G G
Sbjct: 228 MRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQP 287
Query: 270 ----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQ 325
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE
Sbjct: 288 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 347
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSN 350
A++ + G +G +RLSWGRS +N
Sbjct: 348 AINQMQGYPIGNSRVRLSWGRSQNN 372
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY FV F + +++T
Sbjct: 63 TLWMGELEGWIDENFIRNIWYQMGEQVN-VKMIRDKFSGANAGYCFVDFATPAAAAKALT 121
Query: 228 EMNGVLCST-RPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+ +T RP ++ A+ A + ++ +IFVG L P V
Sbjct: 122 VNGTPMPNTQRPFKLNWASGGGLADRSREERGP--------------EFSIFVGDLGPEV 167
Query: 287 TDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
+ +L ++F ++ KI + GFV+F++ T ++ALS + G G +
Sbjct: 168 NEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRP 227
Query: 340 IRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 228 MRISTA-TPKNK 238
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 180/308 (58%), Gaps = 29/308 (9%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D +LW+G+L+PW++E+++ S++ G V+ K+IR+K + + GY F++F + +A R
Sbjct: 78 DSKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENTDSAGR 137
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYG--AGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
LQ NG +P++ + F+LNWA+ G A R D GP+++IFVGDL +V +YVL F+
Sbjct: 138 ALQ-LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLMSLFQ 196
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
Y+S K AK+++D +G S+GYGFVRF DE +Q +++ EM GV C RPMRI A K
Sbjct: 197 GKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRISTATPKN 256
Query: 249 AATGQQYQKATYQNTQGSQGE--------------------------NDPNNTTIFVGGL 282
+ G DPNNTT+FVGGL
Sbjct: 257 KSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGYYPQQQPMNQFTDPNNTTVFVGGL 316
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +G +RL
Sbjct: 317 SGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRL 376
Query: 343 SWGRSPSN 350
SWGRS +N
Sbjct: 377 SWGRSQNN 384
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ + + V K++ D+ +G + GY FV F + R++
Sbjct: 82 TLWMGELEPWIDENFVRSVWFGMGYQVN-VKMIRDKFSGSNAGYCFVDFENTDSAGRAL- 139
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG + S R ++ A+ A S+ + P +IFVG L P
Sbjct: 140 QLNGQMIPNSNRQFKLNWASGGGLA-------------DRSRDDRGPE-YSIFVGDLGPE 185
Query: 286 VTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
V + +L ++F G+Y KI + + GFV+F++ ++AL + G G +
Sbjct: 186 VNEYVLMSLFQGKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNR 245
Query: 339 SIRLSWGRSPSNK 351
+R+S +P NK
Sbjct: 246 PMRISTA-TPKNK 257
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 185/315 (58%), Gaps = 41/315 (13%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+G+L+PWM+E++I +F GE V+ KVIR+K + + GY F+EF + +A + L
Sbjct: 30 TLWMGELEPWMDENFIKGVFLSSAGETVNVKVIRDKNSG-NAGYCFVEFPTPDSATKAL- 87
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P++++ F+LNWA+ G +RR D GP+++IFVGDL +V +YVL F+A +
Sbjct: 88 GLNGQAVPNSQRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 147
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S K AK++TD +G+S+GYGFVRF DE++Q R++ EM GV C RPMRI A K
Sbjct: 148 SCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNH 207
Query: 253 --------------------------QQYQKATYQNTQGSQGEN-----------DPNNT 275
Q + G G N DPNNT
Sbjct: 208 GFGHGHQGGPMMGGGMPQQQQMWGGVQNFPYGGGGGGGGGGGGNFNPATQMNQFTDPNNT 267
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
T+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF +R AE A++ + G +
Sbjct: 268 TVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 327
Query: 336 GGQSIRLSWGRSPSN 350
G +RLSWGRS +N
Sbjct: 328 GNSRVRLSWGRSQNN 342
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 37/198 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + ++ F + KV+ D+ +G + GY FV F +++
Sbjct: 30 TLWMGELEPWMDENFIKGVFLSSAGETVNVKVIRDKNSGNA-GYCFVEFPTPDSATKALG 88
Query: 228 EMNG--VLCSTRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+NG V S R ++ G ++ G +Y +IFVG
Sbjct: 89 -LNGQAVPNSQRQFKLNWASGGGLVDRRDDRGPEY--------------------SIFVG 127
Query: 281 GLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGT 333
L P V + +L ++F ++ KI + GFV+F++ ++AL + G
Sbjct: 128 DLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGV 187
Query: 334 QLGGQSIRLSWGRSPSNK 351
G + +R+S +P N+
Sbjct: 188 YCGNRPMRISTA-TPKNR 204
>gi|414886902|tpg|DAA62916.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 308
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 137/196 (69%), Gaps = 4/196 (2%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 103 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 160
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S AAAE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 161 FIEFYSRAAAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDV 220
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+GA VV DR TG KG+GFVRFGD +EQ R+MTEMNG+L STR
Sbjct: 221 TDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQ 280
Query: 239 MRIGPAATKKAATGQQ 254
MRIG AA KK QQ
Sbjct: 281 MRIGAAANKKNRDAQQ 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTD-YVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G+GE R T+++GDL + + Y+ F AV + K++ ++ TG S+GY
Sbjct: 107 TPGSGEVR-------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGY 159
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GF+ F + ++ NG + M + A+ + +G G
Sbjct: 160 GFIEFYSRAAAEHTLMNFNGQMMPNVEMTFK----------LNWASASTGDKRGDSG--- 206
Query: 272 PNNTTIFVGGLDPSVTDDILKTVF-GQY----GELVHVKIPAG--KRCGFVQFANRTCAE 324
++ TIFVG L VTD +L+ VF +Y G V V G K GFV+F +
Sbjct: 207 -SDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQA 265
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
+A++ +NG L + +R+ + N+ + Q
Sbjct: 266 RAMTEMNGMLLSTRQMRIGAAANKKNRDAQQ 296
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 191/346 (55%), Gaps = 14/346 (4%)
Query: 12 QTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSD 71
+ + + +Q Q + +S + Q Q P+ P + S+ T YG + D +
Sbjct: 34 KDNSFNEQDDQEVDNDYKSNDEPVQSQDPISPNMASNESGN---SENTSNYGSSRDENVY 90
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A
Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+ + N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F +
Sbjct: 151 M-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASR 209
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y+S K AK++TD T S+GYGFVRF DE++Q ++ EM G +C RP+R+G A K A
Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKA 269
Query: 251 TGQQYQKAT---------YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
Y Q D N+T+FVGGL V+++ LK +F +GE+
Sbjct: 270 HVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEI 329
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
V+VKIP GK CGFVQF NR AE A++ L G LG IRLSWGR+
Sbjct: 330 VYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 191/350 (54%), Gaps = 55/350 (15%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLW-------------------IGDLQPWMEESYIASIFG 95
P Q P G + DG +LW +G+L+ W++E++I +I+
Sbjct: 43 PGAQQDPSGSPGNQQQDGKTTLWYRSLDSSSSSSSFFYSLTVMGELEGWIDENFIRNIWY 102
Query: 96 HTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG 155
GE V+ K+IR+K + + GY F++F S AAA + L NGT MP+T++ F+LNWA+ G
Sbjct: 103 QMGEQVNVKMIRDKFSGANAGYCFVDFASPAAAAKALAV-NGTPMPNTQRPFKLNWASGG 161
Query: 156 --AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGF 213
A R++ GP+F+IFVGDL +V +YVL F++ + S K AK++TD TG S+GYGF
Sbjct: 162 GLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGF 221
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE---- 269
VRF DE++Q R+++EM GV C RPMRI A K A G G
Sbjct: 222 VRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPP 281
Query: 270 -----------------------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
DPNNTT+FVGGL VT+D L++ F +GE
Sbjct: 282 SMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGE 341
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 342 ITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 391
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+G+L + + ++ + + V K++ D+ +G + GY FV F +N
Sbjct: 85 MGELEGWIDENFIRNIWYQMGEQVN-VKMIRDKFSGANAGYCFVDF-ASPAAAAKALAVN 142
Query: 231 GVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
G + RP ++ A+ A S+ E P +IFVG L P V +
Sbjct: 143 GTPMPNTQRPFKLNWASGGGLA-------------DRSREERGPE-FSIFVGDLGPEVNE 188
Query: 289 DILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
+L ++F ++ KI + GFV+F++ T ++ALS + G G + +R
Sbjct: 189 YVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMR 248
Query: 342 LSWGRSPSNK 351
+S +P NK
Sbjct: 249 ISTA-TPKNK 257
>gi|413936668|gb|AFW71219.1| hypothetical protein ZEAMMB73_649152 [Zea mays]
Length = 483
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 133/196 (67%), Gaps = 4/196 (2%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIA-SIFGHTGE-FVSGKVIRNKQTNFSEGYG 118
PYG P S +R+LWIGDLQ WM+E+Y+ + F + S K+IRNKQT SEGYG
Sbjct: 169 PYGTTP--GSGEVRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYG 226
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
FIEF S A AE L FNG MP+ E F+LNWA+ G++R D G D TIFVGDLA DV
Sbjct: 227 FIEFSSRATAEHTLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDHTIFVGDLAHDV 286
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
TD +L++ FRA Y SV+ A VV DR TG KGYGFVRFGD +EQ +MTEMNG+L STR
Sbjct: 287 TDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQAHAMTEMNGMLLSTRQ 346
Query: 239 MRIGPAATKKAATGQQ 254
MRIG A KK QQ
Sbjct: 347 MRIGATANKKNRDAQQ 362
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 153 TYGAGERRQDDGPDFTIFVGDLAADVTD-YVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
T G+GE R T+++GDL + + Y+ F AV + K++ ++ TG S+GY
Sbjct: 173 TPGSGEVR-------TLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGY 225
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GF+ F + ++ NG + M + A+ + +G G
Sbjct: 226 GFIEFSSRATAEHTLMNFNGQMMPNVEMTFK----------LNWASASTGDKRGDSG--- 272
Query: 272 PNNTTIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPAGKRC------GFVQFANRTCAE 324
++ TIFVG L VTD +L+ VF +Y + + + GFV+F +
Sbjct: 273 -SDHTIFVGDLAHDVTDSMLEDVFRAKYPSVRRANVVVDRMTGWPKGYGFVRFGDLNEQA 331
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
A++ +NG L + +R+ + +NK++ AQ
Sbjct: 332 HAMTEMNGMLLSTRQMRIG---ATANKKNRDAQ 361
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/143 (81%), Positives = 126/143 (88%), Gaps = 3/143 (2%)
Query: 258 ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+++QNTQG+QGE+DPNNTTIFVGGLD +VTDD L+ VF QYGELVHVKIP GKRCGFVQF
Sbjct: 35 SSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQF 94
Query: 318 ANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGY 375
ANR CAEQAL+ LNGTQLG QSIRLSWGRSPSNKQ+ DQAQWNGG Y AQGYEAYGY
Sbjct: 95 ANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGY-AQGYEAYGY 153
Query: 376 APPTQDPNMYYGGFPGYGTYQQP 398
APP QDPNMYYG +PGYG YQQP
Sbjct: 154 APPPQDPNMYYGAYPGYGNYQQP 176
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + + Y+ +F GE V K+ K+ GF++F + A AE+ L
Sbjct: 53 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC------GFVQFANRACAEQALAG 106
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ + Q+ RL+W + ++ Q D
Sbjct: 107 LNGTQLGA--QSIRLSWGRSPSNKQAQPD 133
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 168/283 (59%), Gaps = 13/283 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE---GYGFIEFVSHAAAERV 131
+LW+GDL+PWM+ ++I ++ E V+ KV+R+K ++ SE Y F++F S AAAER
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASS-SETLISYCFVQFSSSAAAERA 144
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIFVGDLAADVTDYVLQETFRA 189
L +N T +P F+LNWAT G + P+F+IFVGDL D L TFR+
Sbjct: 145 LMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRS 204
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+Y S AK++ D TG S+ YGFVRF E EQ ++ M G LC RP+RI A+ K
Sbjct: 205 IYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSR 264
Query: 250 A-----TGQQYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A + + N Q +Q DP NTT+FVGGL ++++ L+ F +G ++
Sbjct: 265 ASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRIL 324
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
++KIP GK CGFVQ++ ++ AE+A++ + G +G IRL+WG
Sbjct: 325 NIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWG 367
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 177/329 (53%), Gaps = 57/329 (17%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P +QQ G + + D +LW+G+L+PW++E++I S++ GE V+ K+IR+K +
Sbjct: 53 PFAQQGGVEGSSGSVTGDAKTTLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSG- 111
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
+ GY FI+F S AAA + L + NG D GP+F+IFVGD
Sbjct: 112 NAGYCFIDFSSPAAAAKAL-SLNG-----------------------DDRGPEFSIFVGD 147
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L +V +YVL F+A + S K AK++TD +G S+GYGFVRF DE +Q R++TEM GV
Sbjct: 148 LGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEQDQQRALTEMQGVY 207
Query: 234 CSTRPMRIGPAATKKA--------------------------------ATGQQYQKATYQ 261
C RPMRI A K + G Q Y
Sbjct: 208 CGNRPMRISTATPKNKSGGAGGPAGMPMQGGGGMGGGQPGGMGAPGMYSMGAPPQLGYYG 267
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
Q DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R
Sbjct: 268 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 327
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
AE A++ + G +G +RLSWGRS +N
Sbjct: 328 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 356
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 170/296 (57%), Gaps = 21/296 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE--FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
R+LW+GDL M++ Y+ +F + S K+I+++ T S GYGF+EF S A+ V
Sbjct: 1 RTLWMGDLDDSMDDEYVKKLFANDIRPSINSVKIIKDRNTGKSIGYGFVEFASIEIAKAV 60
Query: 132 LQTFNGTQMPST-EQNFRLNWATYGAGE----------RRQDDGPD--FTIFVGDLAADV 178
L+++ G +P+ + +RLNWA G + G + +IFVGDLA DV
Sbjct: 61 LESYAGKPIPTLPNKIYRLNWAAQNQGSNPLFSSQPGGKPSSGGKENIVSIFVGDLAPDV 120
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
DY+L++TFR Y SV+GAKVV D +G SKGYGFV+F DE + +RSMTEM GV S+RP
Sbjct: 121 NDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGFVKFADEDDMMRSMTEMQGVYISSRP 180
Query: 239 MRIGPAATKKAATG--QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
++I A + G + T T + E NTT++VG L P+ + IL+ F
Sbjct: 181 VKISHATNNFKSQGALEDLMPTTIITTDPLEQE----NTTVYVGNLSPNTDEKILREFFQ 236
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
YG + VKIP CGF+ F AE+A+ +NG ++ G +R+SWGR NK+
Sbjct: 237 GYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGIEIQGNRVRVSWGRVQHNKK 292
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNF 113
P +QP G + I S+++GDL P + + + F + V G KV+ + ++
Sbjct: 90 PLFSSQPGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGI 149
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQM---PSTEQNFRLNWATYGAGERRQD-------- 162
S+GYGF++F R + G + P + N+ + GA E
Sbjct: 150 SKGYGFVKFADEDDMMRSMTEMQGVYISSRPVKISHATNNFKSQGALEDLMPTTIITTDP 209
Query: 163 -DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ + T++VG+L+ + + +L+E F+ Y + K+ T+ GF+ F
Sbjct: 210 LEQENTTVYVGNLSPNTDEKILREFFQG-YGPITSVKIPTNSNC------GFINFTRTEH 262
Query: 222 QLRSMTEMNGVLCSTRPMRI 241
R++ EMNG+ +R+
Sbjct: 263 AERAIIEMNGIEIQGNRVRV 282
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 153/260 (58%), Gaps = 24/260 (9%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD-GPDFTIFVG 172
+ GY F++F + AA + L T NG +P++ + F+LNWA+ G + R+DD GP+++IFVG
Sbjct: 15 NAGYCFVDFQTPEAAAKAL-TLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYSIFVG 73
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL +V +YVL F+ Y S K AK+++D +G S+GYGFVRF DESEQ R++ EM GV
Sbjct: 74 DLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNEMQGV 133
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKAT----------------------YQNTQGSQGEN 270
C RPMRI A K + G Y Q
Sbjct: 134 YCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAPQPMNQFT 193
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL VT+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ +
Sbjct: 194 DPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQM 253
Query: 331 NGTQLGGQSIRLSWGRSPSN 350
G +G +RLSWGRS +N
Sbjct: 254 QGYPIGNSRVRLSWGRSQNN 273
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 57/220 (25%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + E + S+F G S K++ + + S GYGF+ F + +R L
Sbjct: 69 SIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALN 128
Query: 134 TFNGTQMPSTEQNFRLNWAT--------------------------YGAGE--------- 158
G + R++ AT YG G
Sbjct: 129 EMQGVY--CGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAP 186
Query: 159 ---RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
+ D + T+FVG L+ VT+ L+ F +G +T KG GFV+
Sbjct: 187 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFF-------QGFGEITYVKIPPGKGCGFVQ 239
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRI---------GPAAT 246
F ++ +M G +R+ GPA T
Sbjct: 240 FVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSGPAGT 279
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQG 265
+ GY FV F +++T +NG + S RP ++ A+ Q+ +
Sbjct: 15 NAGYCFVDFQTPEAAAKALT-LNGQMIPNSNRPFKLNWAS-----------GGGLQDRRD 62
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFA 318
+G +IFVG L P V + +L ++F G+Y KI + + GFV+F+
Sbjct: 63 DRGPE----YSIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFS 118
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+ + ++AL+ + G G + +R+S +P NK
Sbjct: 119 DESEQQRALNEMQGVYCGNRPMRISTA-TPKNK 150
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 170/301 (56%), Gaps = 27/301 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-----GYGFIEFVSHAAA 128
R+LW+GD++PW E +I ++ T + V KVI+ +Q GY F+EF + A
Sbjct: 28 RTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGYCFVEFETPEDA 87
Query: 129 ERVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+ L+ NGT +P +T++ FRLNWA+ + P++++FVGDL+ T+ L F
Sbjct: 88 KEALK-LNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSPATTEAHLLALF 146
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ +S+VK +V+TD TG S+ +GFVRF + ++ +++ EMNG R +R+ A K
Sbjct: 147 QTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDGRLIRVALATPK 206
Query: 248 KAATGQQYQK------------------ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
QQ++K Y Q +DP NTT+FVGGL ++T+
Sbjct: 207 HQ--NQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTVFVGGLSNNITEA 264
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L ++F YG++VHVK+P GK CGFV+F RT AE+A+ L G + G +RLSWGRS
Sbjct: 265 TLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQGYVIDGSRVRLSWGRSNR 324
Query: 350 N 350
N
Sbjct: 325 N 325
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 30/138 (21%)
Query: 24 MAYQQQSQQQQQQHQTPVP---------PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR 74
+A + QQ ++HQ P+ PP+G+ P PPP A SD
Sbjct: 202 LATPKHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPP------------AYSDPTN 249
Query: 75 -SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++++G L + E+ + SIF G+ V KV K G GF++F AER ++
Sbjct: 250 TTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGK------GCGFVKFTQRTDAERAIE 303
Query: 134 TFNGTQMPSTEQNFRLNW 151
G + + RL+W
Sbjct: 304 QLQGYVIDGSR--VRLSW 319
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 170/312 (54%), Gaps = 45/312 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERV 131
+LW+GDL+ WM+ ++I ++ GE V K++R K ++ SEG Y F++F S AAE
Sbjct: 88 TLWMGDLESWMDAAFIQQLWASLGETVHVKLMRTK-SSVSEGCVSYCFVQFSSPQAAEYA 146
Query: 132 LQTFNGTQMPSTEQNFRLNWAT-----YGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
L +N T +P T F+LNWAT + A RR+ P++++FVGDL + + L T
Sbjct: 147 LLRYNNTIIPRTHSVFKLNWATGGGIQHSAKTRRE---PEYSVFVGDLDPETHEAELYHT 203
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
F +VY S AK++ D TG S+ YGFVRF DE EQ R+++EM G LC RP+RI A+
Sbjct: 204 FHSVYPSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRISVASP 263
Query: 246 -------------TKKAATGQ------------------QYQKATYQNTQGSQGENDPNN 274
T A+T +T Q QG DP N
Sbjct: 264 RSRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVPSSSSSTRQPDQG-LCSIDPFN 322
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
TT+FVGGL T+ L F +G ++++KIP GK CGFVQ+ + AE+A++++ G
Sbjct: 323 TTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCGFVQYTEKAAAEKAITMMQGAL 382
Query: 335 LGGQSIRLSWGR 346
+G IRL+WG
Sbjct: 383 VGPSHIRLAWGH 394
>gi|242042652|ref|XP_002459197.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
gi|241922574|gb|EER95718.1| hypothetical protein SORBIDRAFT_02g000370 [Sorghum bicolor]
Length = 238
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 143/232 (61%), Gaps = 26/232 (11%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGI--RSLWIGDLQPWMEESYIASIFGHTGE 99
P P+ W P P T P APD+SSDG RSLWIG L WM+E Y+ + F + E
Sbjct: 4 PHPLSWADAP-PFYYHGTTP-QPAPDSSSDGAGPRSLWIGGLLHWMDEDYLYACFTTSPE 61
Query: 100 FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY----- 154
+S + R+KQT SEG+GF+ F H A ++L+++NG +MP++ Q+F+LNWAT
Sbjct: 62 LLSVVIRRSKQTGQSEGFGFLNFADHTTAAQILKSYNGHKMPNSVQDFKLNWATQQPAPD 121
Query: 155 ---------------GAGERRQDDGP--DFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+R DD + IFVGDLA DVT+Y+L F+ Y+SVK A
Sbjct: 122 KLPDPHFKLDPAMQQDVPQRHDDDNSSSEHFIFVGDLAYDVTEYMLHHLFKTRYASVKRA 181
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
K++ DR TGRSKGYGFV+FGD +EQ +++TEMNG CSTRPMRIGP KK+
Sbjct: 182 KIIVDRFTGRSKGYGFVQFGDVNEQTQALTEMNGAYCSTRPMRIGPVPNKKS 233
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 30/216 (13%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT--TGRSKGYG 212
GAG R ++++G L + + L F +S + VV R+ TG+S+G+G
Sbjct: 32 GAGPR--------SLWIGGLLHWMDEDYLYACFT---TSPELLSVVIRRSKQTGQSEGFG 80
Query: 213 FVRFGDESEQLRSMTEMNG--VLCSTRPMRIG-----PAATKKAATGQQYQKATYQNT-Q 264
F+ F D + + + NG + S + ++ PA K + A Q+ Q
Sbjct: 81 FLNFADHTTAAQILKSYNGHKMPNSVQDFKLNWATQQPAPDKLPDPHFKLDPAMQQDVPQ 140
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFG-QYGELVHVKIPA------GKRCGFVQF 317
+N + IFVG L VT+ +L +F +Y + KI K GFVQF
Sbjct: 141 RHDDDNSSSEHFIFVGDLAYDVTEYMLHHLFKTRYASVKRAKIIVDRFTGRSKGYGFVQF 200
Query: 318 ANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+ QAL+ +NG + +R+ G P+ K +
Sbjct: 201 GDVNEQTQALTEMNGAYCSTRPMRI--GPVPNKKST 234
>gi|212722006|ref|NP_001131810.1| uncharacterized protein LOC100193183 [Zea mays]
gi|194692604|gb|ACF80386.1| unknown [Zea mays]
Length = 236
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 25/210 (11%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
EQ++++TEMNG CSTRPMRIGP KK+A
Sbjct: 203 EQIQALTEMNGAYCSTRPMRIGPVPKKKSA 232
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG--VLCSTRPMRIG-----PAATKKAAT 251
+ ++ TG+S+G+GF++F D + + NG + + + ++ PA K
Sbjct: 68 IKRNKQTGQSEGFGFLKFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPDP 127
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPAGK 310
+ AT Q + + ++ +IFVG L +VT +L VF +Y + KI K
Sbjct: 128 DFKLDLATQQERHAAVDSS--SDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDK 185
Query: 311 -----RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+C GFVQF + QAL+ +NG + +R+ G P K +
Sbjct: 186 FTGLSKCYGFVQFGDVDEQIQALTEMNGAYCSTRPMRI--GPVPKKKSA 232
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 185/377 (49%), Gaps = 89/377 (23%)
Query: 76 LWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNK-QTNFSE-GYGFIEFVSHAAAERVL 132
LW+G+L P+ +E+ I SI+ G ++ K+I+ K Q F+ GY FIEF + A L
Sbjct: 43 LWMGELDPFWDENSIKSIWLSLGFNNINVKLIKEKIQQGFNNAGYCFIEFPNIEQASNAL 102
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQD-----------DGPDFTIFVGDLAADVTDY 181
+ NG ++P+T ++ +LNWA+ G + + + +IFVGDLA DV+D
Sbjct: 103 NS-NGLKIPNTNKSLKLNWASGGQNSNNHNNNNNNNGSIGYNRNEVSIFVGDLAPDVSDT 161
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+L E F + Y SV G K++ D TG SKGYGFVRF +E EQ R++ EM G + + RP+R+
Sbjct: 162 ILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRALVEMQGAILNGRPIRV 221
Query: 242 GPAATKKAATG----------------------------------------------QQY 255
A K QY
Sbjct: 222 STAVPKNRQQQQGQQQGGGFNGNQGFNGSRFNNNLQPLQSSIPSSSGPSQQILNGLESQY 281
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
Q Q T DPNNTT+F+GGL VT+D L+ F +G++ +VKIP GK CGFV
Sbjct: 282 QPPLTQFT-------DPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFV 334
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYE---- 371
Q+ R+ AE A+S + G +G IRLSWGRS SN + QGY+
Sbjct: 335 QYVTRSSAELAISKMQGYPIGNSRIRLSWGRSNSNPK--------------PQGYKQQPE 380
Query: 372 ---AYGYAPPTQDPNMY 385
YGY P Q PN +
Sbjct: 381 LPLLYGYNPSPQFPNQF 397
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 169/301 (56%), Gaps = 29/301 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-----------SEGYGFIEF 122
R+LW+GDL+PW E I ++ G+ V K+IR++ + GY F+EF
Sbjct: 52 RTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEF 111
Query: 123 VSHAAAERVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
H A + L NG+ +P S+ + FRLNWA+ + + P +++FVGDL+ T+
Sbjct: 112 ERHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTEA 170
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L F+ YSS++ +V+TD TG S+ +GFVRF +E ++ R++ EM+G+ RP+R+
Sbjct: 171 HLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIRV 230
Query: 242 GPAATKKAATGQQYQKATY---------------QNTQGSQGENDPNNTTIFVGGLDPSV 286
AT + A Q Q + N+ NDP N+T+FVGGL V
Sbjct: 231 A-LATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGV 289
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ L T+F +G + +KIP GK CGFV+F+ R AE A+S ++G +GG +RLSWGR
Sbjct: 290 SEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAISGMHGFLIGGSRVRLSWGR 349
Query: 347 S 347
S
Sbjct: 350 S 350
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 169/307 (55%), Gaps = 41/307 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL P E I I+ GE V K+I+N + GY F+EF S+ AA L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 135 FNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P + +LNWA++ G +F+IFVGDLA +VT+ L E F + YSS
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT-----TPGSEFSIFVGDLAPNVTESQLFELFISRYSS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 168 TLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQS 227
Query: 250 ----ATGQQYQKATYQNTQG-SQGEN------------------------DPNNTTIFVG 280
+ +T N+ G +QG N DPNNTT+F+G
Sbjct: 228 GNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFIG 287
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
GL VT+D L+ F +G++V+VKIP GK CGFVQ+ +R+ AE A++ + G +G +
Sbjct: 288 GLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSRV 347
Query: 341 RLSWGRS 347
RLSWGRS
Sbjct: 348 RLSWGRS 354
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 169/307 (55%), Gaps = 41/307 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL P E I I+ GE V K+I+N + GY F+EF S+ AA L
Sbjct: 54 LYMGDLDPSWTEGDIKQIWATLGEANVQVKLIKNSSGGGNSGYCFVEFPSNLAATNALLK 113
Query: 135 FNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P + +LNWA++ G +F+IFVGDLA +VT+ L E F + YSS
Sbjct: 114 -TGLPIPVDASRTLKLNWASFAT-----TPGSEFSIFVGDLAPNVTESQLFELFISRYSS 167
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 168 TLNAKIVFDQGTGVSKGYGFVKFGNEAEQQRSLLEMQGVFLNGRAIRVSTTSKNKSRFQS 227
Query: 250 ----ATGQQYQKATYQNTQG-SQGEN------------------------DPNNTTIFVG 280
+ +T N+ G +QG N DPNNTT+F+G
Sbjct: 228 GNPASAAPASPASTAVNSPGLAQGSNVQTLLQQSQFIYPVQQQPALSQFADPNNTTVFIG 287
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
GL VT+D L+ F +G++V+VKIP GK CGFVQ+ +R+ AE A++ + G +G +
Sbjct: 288 GLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSRV 347
Query: 341 RLSWGRS 347
RLSWGRS
Sbjct: 348 RLSWGRS 354
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 5/142 (3%)
Query: 258 ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
+TYQNTQG+ ++DPNNTT+FVGGLDPSVTD++LK F YGELV+VKIP GKRCGFVQ+
Sbjct: 16 STYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQY 75
Query: 318 ANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGF-AQGYEAYG 374
+NR AE+A+ +LNG+QLGGQSIRLSWGRSP NK Q DQ QWN GYYG+ QGY+ YG
Sbjct: 76 SNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN-AGYYGYPPQGYDPYG 134
Query: 375 YAPPTQDPNMY-YGGFPGYGTY 395
Y P QDP MY Y +PGYG Y
Sbjct: 135 YVRPPQDPAMYAYAAYPGYGNY 156
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 67 DASSD-GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
D+ SD ++++G L P + + + F GE V K+ K+ GF+++ +
Sbjct: 25 DSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNR 78
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
A+AE ++ NG+Q+ Q+ RL+W ++ Q D
Sbjct: 79 ASAEEAIRMLNGSQLGG--QSIRLSWGRSPGNKQPQQD 114
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 162/300 (54%), Gaps = 25/300 (8%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D ++SLW+G++QP E Y+ SI+ + + K++R++ T + GYGF+EF SHA A
Sbjct: 20 DDVKSLWVGEVQPDWTEEYMRSIYAECNKRFNVKIMRDRATGTAAGYGFLEFESHADAAE 79
Query: 131 VLQTFNGTQMPSTEQNFRLNWAT--------------YGAGERRQD--DGP----DFTIF 170
VL+ + +P T L W YGAG GP D++IF
Sbjct: 80 VLRLYEDKPIPGTPFKCVLRWGGGHGTAAAKPKGGTPYGAGTMHPVGYSGPPPQADWSIF 139
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL VT+ L F Y S+ K+V D +TG SKG+GF++FG E+E+ +M EM+
Sbjct: 140 VGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKFGSEAERDSAMNEMH 199
Query: 231 GVLCSTRPMRIGPAATKK-----AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
G R +R A T++ A QQ Q + + NT +FVGGLD S
Sbjct: 200 GQYVGERAIRCTLATTREEREREAKMNQQQQMYDPSRLHAPKATEEGENTCVFVGGLDES 259
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
V+ D+L+ FG G++ +++IP G+ CGFV F +R AE A+S L G ++ G +RLSWG
Sbjct: 260 VSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAISTLQGLRINGYKVRLSWG 319
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 188/380 (49%), Gaps = 79/380 (20%)
Query: 51 PVPPPSQQTQPYGVAPD--ASSDGIRSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR 107
P PP S Q D AS+D R+LW+GDL PW++E+ IA + + G+ V+ K+I+
Sbjct: 28 PKPPVSTQQSSAAAESDTIASNDAPRTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIK 87
Query: 108 NKQTN--------FSEGYGFIEFVSHAAAERVLQTFNGTQMPST---------------E 144
K GY F+EF S+ A++ L + NG +P +
Sbjct: 88 PKNVRGSMSSSGLSHSGYCFVEFESYEDAQQAL-SLNGQLLPDIAMPSQQSFPNNPDNQK 146
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDR 203
+ FRLNWA+ GP++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 147 KYFRLNWASGATLTAPIVQGPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDP 206
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA----- 258
TG+S+ +GFVRF DESE+ R++ EMNG RP+R+ A + + +Q
Sbjct: 207 VTGKSRCFGFVRFTDESERQRALVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWG 266
Query: 259 -----------------TYQNTQGSQGEN----------------------------DPN 273
Y N G E+ DPN
Sbjct: 267 GGAPYYPYGYAGAPGSPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPN 326
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT+FVGGL V + L T+F Q+G + +KIP GK CGFV++ NR AE+A++ + G
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGF 386
Query: 334 QLGGQSIRLSWGR-SPSNKQ 352
+GG +RLSWGR S SNK+
Sbjct: 387 IIGGNRVRLSWGRVSASNKK 406
>gi|414592072|tpg|DAA42643.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 235
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 26/210 (12%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
EQ++ +TEMNG CSTRPMRIGP KK+A
Sbjct: 203 EQIQ-LTEMNGAYCSTRPMRIGPVPKKKSA 231
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 172/314 (54%), Gaps = 49/314 (15%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHT---GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ ++++GDL+PWM+E+ I +++ ++ K+IR+K T+ S YGFI+F S A
Sbjct: 1 MSTIYMGDLEPWMDEAAIKNMWAQVMGPDTNINVKLIRDKFTD-SINYGFIDFASPELAA 59
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-DFTIFVGDLAADVTDYVLQETFR 188
L+ FNG +P T++ F+L GE D P +F+IFVGDLA + T+ L + F+
Sbjct: 60 AALK-FNGKPIPGTDRLFKL-------GEDNGDGAPVEFSIFVGDLAPESTEPELLQAFK 111
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ Y S + AK++TD TG S+GYGFVRF E +Q +++ EM G + +RP+R+ A K
Sbjct: 112 SRYESCRAAKIMTDPVTGLSRGYGFVRFSSEEDQQKALQEMQGYMLGSRPLRVSTATPKN 171
Query: 249 AATGQQYQ---------KATYQ----------NTQGSQGE-----------------NDP 272
Q Y A YQ + G+ D
Sbjct: 172 RHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGAPSHQVHQPFYGGPAHPLNQFTDA 231
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
NNTT+FVGGL SV++D L+ F +G++ +VKIP GK CGFVQ+ R AE A++ + G
Sbjct: 232 NNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPGKGCGFVQYVQRQSAEMAITQMQG 291
Query: 333 TQLGGQSIRLSWGR 346
+G +RLSWGR
Sbjct: 292 YPIGNGRVRLSWGR 305
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 25/282 (8%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG 137
+G+L WM+E+Y+ ++ + G VS ++ +K + Y FI+F++ AA + L TFNG
Sbjct: 1 MGELDSWMDENYLRQLWWNLGHEVSCRISVDK---YGANYAFIDFLTREAASKSLITFNG 57
Query: 138 TQMPSTEQNFRLNWATYGAGERRQDDGP--------DFTIFVGDLAADVTDYVLQETFRA 189
TQ+P+T + F+LNW+ + P D+ IFVGDL ADV D +L TF++
Sbjct: 58 TQIPNTNKVFKLNWSNRDSNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLTTFQS 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-K 248
Y S AKV+ D TG SKG+GFV+F DE EQ RS+ EM G + +R+ A K K
Sbjct: 118 RYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIRVSVARPKAK 177
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
TG G + TT+FVGGL+ ++T++ L+ FG +G +V VKI
Sbjct: 178 IETGPV--------VSGPE-----EITTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIP 224
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K F+Q+ ++ AEQA+S LNG+ LGG +RLS+GR+ N
Sbjct: 225 LKNIAFIQYEKKSSAEQAISELNGSHLGGAKLRLSFGRTQLN 266
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 165/283 (58%), Gaps = 7/283 (2%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S D ++L++G+L P++ ++ + IF G+ K+I++K T S GYGF++F+ H AA
Sbjct: 17 SGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQ+ NG + Q R+NWA ++R+D F IFVGDLA+D+ D +L E F+
Sbjct: 77 DMALQSLNGRVLHG--QELRVNWAFQK--DQREDSASQFQIFVGDLASDINDKLLCEAFQ 132
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ A+V+ D TGRSKGYGFV F ++ +++++M+G + +R +R G A K+
Sbjct: 133 SC--GCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQ 190
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
+ + +T S+ + DP N ++VG L P V+D L+T Q+G ++ VKI
Sbjct: 191 ENSQASFAAVDRVSTL-SRAQADPENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYR 249
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
F QFA+ A +A+ L+G LGG++++ SWGR + K
Sbjct: 250 KGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARK 292
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Q +Q+A QN G D ++VG L P VTD +L+ +F G++ +KI K
Sbjct: 2 QGFQQAVSQNP-ARLGSGDAAKA-LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLT 59
Query: 313 G------FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
G FVQF + A+ AL LNG L GQ +R++W ++ +Q+
Sbjct: 60 GLSAGYGFVQFLDHRAADMALQSLNGRVLHGQELRVNWAFQKDQREDSASQF 111
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 186/380 (48%), Gaps = 79/380 (20%)
Query: 51 PVPPPSQQTQPYGVAPD--ASSDGIRSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR 107
P PP S Q D AS+D R+LW+GDL PW++E+ IA + + G+ V+ K+I+
Sbjct: 28 PKPPVSTQQSSAAAESDTIASNDAPRTLWMGDLDPWLDEAAIADLWYQLLGKKVTIKIIK 87
Query: 108 NKQTN--------FSEGYGFIEFVSHAAAERVLQTFNGTQMPST---------------E 144
K GY F+EF S+ A++ L + NG +P +
Sbjct: 88 PKNVRGSMSSSGLSHSGYCFVEFESYEDAQQAL-SLNGQLLPDIAMPSQQLFPNNPDNQK 146
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDR 203
+ FRLNWA+ GP++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 147 KYFRLNWASGATLTAPIVQGPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRVMTDP 206
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA----- 258
TG+ + +GFVRF DESE+ R++ EMNG RP+R+ A + + +Q
Sbjct: 207 VTGKLRCFGFVRFTDESERQRALVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWG 266
Query: 259 -----------------TYQNTQGSQGEN----------------------------DPN 273
Y N G E+ DPN
Sbjct: 267 GGAPYYPYGYAGAPGLPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPN 326
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT+FVGGL V + L T+F Q+G + +KIP GK CGFV++ NR AE+A++ + G
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGF 386
Query: 334 QLGGQSIRLSWGRS-PSNKQ 352
+GG +RLSWGR SNK+
Sbjct: 387 IIGGNRVRLSWGRVLASNKK 406
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 173/326 (53%), Gaps = 41/326 (12%)
Query: 57 QQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSE 115
TQ + + S+ SL++GDL P +E+ I +++ + GE V K+IRN +
Sbjct: 26 HHTQSHSSPAEQSASRSNSLYMGDLDPSWDENAIRAVWANLGEPNVQVKLIRNSGSTGGS 85
Query: 116 G-YGFIEFVSHAAAERVLQTFNGTQMPSTEQNF-RLNWATYGAGERRQDDGPDFTIFVGD 173
Y F+EF SH A L NG +P+ + +LNWA++ G + ++FVGD
Sbjct: 86 SGYCFVEFPSHLNASNALLK-NGLLIPNARNRYLKLNWASFATAP-----GNEHSVFVGD 139
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
+A +V++ L E F + Y+S AK+V D+ TG SKGYGFV+FG ESEQ R++ EM GV
Sbjct: 140 IAPNVSEAQLFELFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALLEMQGVF 199
Query: 234 CSTRPMRIGPAATKKA------------------ATGQQYQKATYQNTQGSQGE------ 269
+ R +R+ + ++ QQ +A N Q +
Sbjct: 200 LNGRAVRVSTTSKNRSKFQQPLQQQQQPYMQQQQPYVQQQARAPAFNNGNVQSQFIYPVQ 259
Query: 270 --------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
DPNNTT+F+GGL V++D L+ F +G +V+VKIP GK CGFVQ+ +R
Sbjct: 260 QQPTLTQYTDPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRI 319
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRS 347
AE A++ + G +G IRLSWGRS
Sbjct: 320 SAETAIAKMQGYPIGNSRIRLSWGRS 345
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 9/191 (4%)
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
DF++FVGDL +V D+ L+ FR + SV+ AKV+TD TGRSKGYGFVRFG E+E+ R+
Sbjct: 3 DFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRA 62
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATG---------QQYQKATYQNTQGSQGENDPNNTT 276
+ EMNGV S+RP+R+ A ++ G G+ GE DPNNTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
+F+GGL VT+D L+ VFG+YGE+++ KIP GK CGFVQF +R AE A+ +NG +G
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQIIG 182
Query: 337 GQSIRLSWGRS 347
G S+R+SWG+S
Sbjct: 183 GSSVRISWGKS 193
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SL++GDL P + + ++ S F V S KV+ + T S+GYGF+ F S A +R +
Sbjct: 5 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERDRAVV 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---------------------------- 165
NG + S + R++ AT RR D GP
Sbjct: 65 EMNGVFISS--RPVRVSVAT----ARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADP 118
Query: 166 -DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T+F+G L++ VT ++ R V+ G + T G KG GFV+F D
Sbjct: 119 NNTTLFIGGLSSGVT----EDQLRGVFGR-YGEIIYTKIPPG--KGCGFVQFIDRQAAEY 171
Query: 225 SMTEMNGVLCSTRPMRI 241
+M E+NG + +RI
Sbjct: 172 AMQEVNGQIIGGSSVRI 188
>gi|413918498|gb|AFW58430.1| nucleic acid binding protein, partial [Zea mays]
Length = 241
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 112/143 (78%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+++W+GDLQ WM+E+Y+ + FG +GE V+ KVIRN+QT SEGYGF+EF SHA+AE+ LQ
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F G MP+T++ F+LNWA+Y GE+R + D +IFVGDLAADVTD +L E F + Y S
Sbjct: 159 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYRS 218
Query: 194 VKGAKVVTDRTTGRSKGYGFVRF 216
VKGAKV+ D TGRS+GYGFVRF
Sbjct: 219 VKGAKVIIDANTGRSRGYGFVRF 241
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI+VGDL + + L F V KV+ +R TG+S+GYGFV F + +++
Sbjct: 100 TIWVGDLQYWMDENYLHNCF-GPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
G + + RP ++ A+ + G + ++ +IFVG L
Sbjct: 159 NFTGHVMPNTDRPFKLNWASY----------------SMGEKRSEVASDHSIFVGDLAAD 202
Query: 286 VTDDILKTVF 295
VTD++L +F
Sbjct: 203 VTDEMLLELF 212
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 263 TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQ 316
+ GS G N TI+VG L + ++ L FG GE+V +K+ ++ GFV+
Sbjct: 87 SSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVE 146
Query: 317 FANRTCAEQALSVLNGTQL--GGQSIRLSWGR-SPSNKQSDQA 356
F + AE+AL G + + +L+W S K+S+ A
Sbjct: 147 FFSHASAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVA 189
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 183/332 (55%), Gaps = 41/332 (12%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRS-----LWIGDLQPWMEESYI----ASIFGHTGEFV-S 102
PP SQ TQ + + S+G ++ LW+GDL +E+ I +S+ G V S
Sbjct: 21 PPASQYTQSSQL--NGQSNGQQNAQTPQLWMGDLDQRWDETTIKQIWSSVLAPLGILVHS 78
Query: 103 GKVIRNKQTNFSE----GYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGA 156
K+IR+KQ+ E GY FI F + +VL+ FNG +P T + FRLNW++ +
Sbjct: 79 VKLIRDKQSMNLELANAGYCFIRFHNFEDCYKVLELFNGKPIPGTNNVRFFRLNWSSANS 138
Query: 157 ----GERRQDDG-PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
Q G +++IFVGDL VT+ L + F+A Y S GAKV+ D TG KGY
Sbjct: 139 SGANATAFQPKGQSEYSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVMIDPATGHLKGY 198
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE-- 269
GFV+F +E++Q R++ EM G + RP+R+ A+ + A+ +Q G+
Sbjct: 199 GFVKFLNETDQKRALIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASAMPSQDGLGQLK 258
Query: 270 ---------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
NDPNNTT+F+GGL+ +++ L+ +F +YG++ +VKIP GK CGF
Sbjct: 259 VNVPSLPQTAPLQYYNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGF 318
Query: 315 VQFANRTCAEQALSVLNGTQLGGQS-IRLSWG 345
VQF +R AE A+S + G +GG IR+SWG
Sbjct: 319 VQFFHRASAEMAISEMQGYDIGGGCRIRVSWG 350
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/129 (76%), Positives = 111/129 (86%), Gaps = 2/129 (1%)
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
+YQN QG+Q ENDPNNTTIFVG LD +VTD+ L+ VFGQYGELVHVKIP GKRCGFVQFA
Sbjct: 1 SYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFA 60
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYGFAQGYEAYGYA 376
+R CAE+AL VLNGTQ+GGQ+IRLSWGRSPSNK Q+D QWNGGGYYG+ QGYE Y YA
Sbjct: 61 DRNCAEEALRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQWNGGGYYGYGQGYENYSYA 120
Query: 377 PPTQDPNMY 385
P QDPNM+
Sbjct: 121 PAPQDPNMF 129
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G+L + + ++ +FG GE V K+ K+ GF++F AE L+
Sbjct: 18 TIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRC------GFVQFADRNCAEEALRV 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDD 163
NGTQ+ QN RL+W + ++ Q D
Sbjct: 72 LNGTQIGG--QNIRLSWGRSPSNKQPQAD 98
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
G + ++D + TIFVG+L A+VTD L++ F Y + K+ K GFV+F
Sbjct: 7 GAQNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIPV------GKRCGFVQF 59
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRI 241
D + ++ +NG + +R+
Sbjct: 60 ADRNCAEEALRVLNGTQIGGQNIRL 84
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 146/264 (55%), Gaps = 32/264 (12%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGT------QMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
GY F+ F + A A V N + MP++ + F L+WA Q +++I
Sbjct: 39 GYCFLTFSTPAQASTVFAQVNNSGKGGTMTMPNSSKPFVLSWAPAITPNNSQQYQKEYSI 98
Query: 170 FVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGYGFV 214
FVGDLA + ++ L FR + S K AK++ D TG S+GYGFV
Sbjct: 99 FVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGFV 158
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG--QQYQKA--------TYQNT 263
RF DE++Q R++ EM+G+ C +RPMRI PA K K A+G Y +A N
Sbjct: 159 RFSDEADQQRALIEMHGLYCLSRPMRISPATAKFKPASGVSLDYSQAPPFSAPLPNVDNQ 218
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
+ NDP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK CGFVQF + A
Sbjct: 219 PVTLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADA 278
Query: 324 EQALSVLNGTQLGGQSIRLSWGRS 347
E+A+ + G +GG IRLSWGRS
Sbjct: 279 ERAIEKMQGFPIGGSRIRLSWGRS 302
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 165/310 (53%), Gaps = 44/310 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
L++GDL E+ I I+ GE V K+I+N + GY F+EF S+ +A L
Sbjct: 55 LYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPSNLSATNALLK 114
Query: 135 FNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
G +P ++ +LNWA++ G +F+IFVGDLA +V++ L E F + YSS
Sbjct: 115 -TGLPIPVDPSRSLKLNWASFATAP-----GTEFSIFVGDLAPNVSESQLFELFISRYSS 168
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA---- 249
AK+V D+ TG SKGYGFV+FG+E+EQ RS+ EM GV + R +R+ + K+
Sbjct: 169 TLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQGVFLNGRAIRVSTTSKNKSRFRG 228
Query: 250 -ATGQQYQKATYQ------NTQGSQGENDP-------------------------NNTTI 277
+G A N G + P NNTT+
Sbjct: 229 GLSGTVTSAAAATAGPPVGNLSGVIQTSSPQTLPQQSQFIYPVQQQPVLSQFTDPNNTTV 288
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
F+GGL VT++ L+ F +G++V+VKIP GK CGFVQ+ +R+ AE A++ + G +G
Sbjct: 289 FIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGN 348
Query: 338 QSIRLSWGRS 347
IRLSWGRS
Sbjct: 349 SRIRLSWGRS 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 163 DGPDFT---IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
+GP+ T +++GDL A T+ +++ + + K++ + + GY FV F
Sbjct: 46 NGPETTSTQLYMGDLDASWTENDIKQIWATLGEPNVQVKLIKNSGPMNNSGYCFVEFPS- 104
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
+++ N +L + P+ + P+ + K A++ G++ +IFV
Sbjct: 105 -----NLSATNALLKTGLPIPVDPSRSLK------LNWASFATAPGTE-------FSIFV 146
Query: 280 GGLDPSVTDDILKTVF-GQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNG 332
G L P+V++ L +F +Y ++ KI K GFV+F N +++L + G
Sbjct: 147 GDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLVEMQG 206
Query: 333 TQLGGQSIRLS 343
L G++IR+S
Sbjct: 207 VFLNGRAIRVS 217
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 120/161 (74%), Gaps = 8/161 (4%)
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SVKGAKV+ D TGRS+GYGFVRF D++++ +MTEMNG+ CSTRP+RIGPA ++ TG
Sbjct: 2 SVKGAKVIIDANTGRSRGYGFVRFADDNDKSHAMTEMNGIYCSTRPIRIGPATPRR--TG 59
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ +T G + D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+C
Sbjct: 60 D-----SGSSTPG-HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC 113
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
GFVQ+ NRT A++AL LNG+ +G Q +RLSWGRSPS+KQS
Sbjct: 114 GFVQYVNRTDAKEALQGLNGSVIGKQVVRLSWGRSPSHKQS 154
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 53 PPPSQQTQPYGVAPDASSDGI---RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
P ++T G + SDG R++++G L P + E + F G+ S K+ K
Sbjct: 52 PATPRRTGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGK 111
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
Q GF+++V+ A+ LQ NG+ + +Q RL+W
Sbjct: 112 QC------GFVQYVNRTDAKEALQGLNGSVI--GKQVVRLSW 145
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 176/329 (53%), Gaps = 41/329 (12%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVI---RNKQTNFS----EGYG 118
+ S+D L++GDL+P +E+ I I+ GE +S K++ N N S +GY
Sbjct: 47 NMSNDAGVQLYMGDLEPSWDENVIKRIWSSIGEDNISVKMMWQNNNYMGNESGPRNQGYC 106
Query: 119 FIEFVSHAAAERVLQTFNGTQMPST-EQNFRLNWATYGA---GERRQDDGPDFTIFVGDL 174
FI+F +H A L N +P + +LNWA+ A G +F+IFVGDL
Sbjct: 107 FIDFPTHFNASNALLK-NKMSIPGHPHKKLKLNWASSSAPSTAGVSTTGGNNFSIFVGDL 165
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A +VT+ L + F + Y S + AKVV D +TG SKGYGF+RF D ++Q ++ EM GV
Sbjct: 166 APNVTEAQLFDLFISRYPSTEHAKVVIDLSTGVSKGYGFIRFRDPADQQTALAEMQGVFL 225
Query: 235 STRPMRIGPAATKK---AATGQQYQKATYQNTQGSQGEN--------------------- 270
+ R +++G ++ + A +Q Y ++ + G++
Sbjct: 226 NGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFMYPIQQQPAL 285
Query: 271 ----DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQA 326
DPNNTT+F+GGL P V ++ L+ F +GE+V+VKIP GK CGFVQ+ +R AE A
Sbjct: 286 NHFTDPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDRISAETA 345
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
+S + G + +RLSWGRS +Q Q
Sbjct: 346 ISQMQGFPISNSRVRLSWGRSAKQQQLQQ 374
>gi|449472161|ref|XP_004153512.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 176
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 99/119 (83%), Gaps = 2/119 (1%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A+ D +R+LWIGDLQ WM+E+YI + F HTGE S KVIRNKQT SEGYGFIEF++ A
Sbjct: 60 ANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPA 119
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
AERVLQT+NGT MP+ QNFRLNWA+ AGE+RQDD PD+TIFVGDLA DVTDYVLQET
Sbjct: 120 AERVLQTYNGTAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 176
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANR 320
Q N T+++G L + ++ + F GE+ VK+ K+ G F++F R
Sbjct: 58 QSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTR 117
Query: 321 TCAEQALSVLNGTQL--GGQSIRLSWGRSPSNKQSD 354
AE+ L NGT + G Q+ RL+W + +Q D
Sbjct: 118 PAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDD 153
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + + F A V KV+ ++ TG+S+GYGF+ F R +
Sbjct: 67 TLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG G Q + + + G + ++D + TIFVG L VT
Sbjct: 126 TYNGT---------------AMPNGAQNFRLNWA-SAGEKRQDDSPDYTIFVGDLAGDVT 169
Query: 288 DDILK 292
D +L+
Sbjct: 170 DYVLQ 174
>gi|449471357|ref|XP_004153285.1| PREDICTED: polyadenylate-binding protein RBP47B-like, partial
[Cucumis sativus]
Length = 218
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 98/124 (79%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+D +++LWIGDLQPWM+E+Y+ + F HTGE S KVI NKQT SEGYGF+EF SH A
Sbjct: 95 STDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTA 154
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+VLQ +NGT MP+TE FRLNWAT+ A +RR D G D +IFVGDLAADVTD +LQETF
Sbjct: 155 EKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFS 214
Query: 189 AVYS 192
+ Y+
Sbjct: 215 SRYT 218
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 27/135 (20%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + + L F A V KV+ ++ TG+S+GYGFV F + + +
Sbjct: 101 TLWIGDLQPWMDETYLNNCF-AHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 159
Query: 228 EMNGVLC--STRPMRIG----PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
NG + + P R+ A ++ TG ++ +IFVG
Sbjct: 160 NYNGTIMPNTELPFRLNWATFSANDRRPDTG--------------------SDLSIFVGD 199
Query: 282 LDPSVTDDILKTVFG 296
L VTD IL+ F
Sbjct: 200 LAADVTDAILQETFS 214
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSV 329
T+++G L P + + L F GE+ VK+ K+ GFV+F + T AE+ L
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQN 160
Query: 330 LNGTQLGGQSI--RLSWGRSPSNKQ 352
NGT + + RL+W +N +
Sbjct: 161 YNGTIMPNTELPFRLNWATFSANDR 185
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 148/294 (50%), Gaps = 62/294 (21%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGT------QMPSTEQNFRLNWA-TYGAGERRQDDGPDFT 168
GY F+ F + A A VL N + MP++ + F L+WA +++
Sbjct: 39 GYCFLTFSTPAQASTVLAQVNNSGKGGTMTMPNSSKPFVLSWAPAVTPSISTPQYQKEYS 98
Query: 169 IFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGYGF 213
IFVGDLA + ++ L FR + S K AK++ D TG S+GYGF
Sbjct: 99 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPLTGVSRGYGF 158
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG-------------------- 252
VRF DE++Q R++ EM+G+ C +RPMRI PA K K A+G
Sbjct: 159 VRFSDEADQQRALIEMHGLYCLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVF 218
Query: 253 ---------------QQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKT 293
+ +A N G GE NDP NTT+FVGGL P ++++ L+T
Sbjct: 219 GQTDGYLMTEESLKHHAHARAILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRT 278
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F +G++ +VK+P GK CGFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 279 FFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 332
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 157/316 (49%), Gaps = 45/316 (14%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
G L++GDL P +E+ I I+ GE V K++ N ++GY F+EF S
Sbjct: 45 GSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHGNN 104
Query: 131 VLQTFNGTQMPSTEQN-FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L NG +P Q +LNWA+ GA + F++FVGDL+ +VT+ L E F
Sbjct: 105 ALLK-NGIVIPGFPQRRLKLNWASAGA----NGNNSGFSVFVGDLSPNVTEAQLFELFIG 159
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG------- 242
Y S AKVV D+ TG SK YGFV+F ++Q R + EM GV + R +++G
Sbjct: 160 RYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIKVGLTGGAHN 219
Query: 243 -------------------PAATKKAATGQQYQKATYQNTQGSQ------------GEND 271
P + ++G + SQ D
Sbjct: 220 DNSNTNSMAGGRSRFGGMPPNSASTVSSGNSNNRNMTPLLNSSQFMYPVQQQPTLNHLTD 279
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLN 331
PNNTT+F+GGL V++D L+ F +G++++VKIP GK CGFVQ+ +R AE A+S +
Sbjct: 280 PNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKMQ 339
Query: 332 GTQLGGQSIRLSWGRS 347
G L IRLSWGRS
Sbjct: 340 GFPLANSRIRLSWGRS 355
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++GDL + + V+++ +R + S K++ + G ++GY FV F E +
Sbjct: 49 LYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEF-PSMEHGNNALL 107
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
NG++ P Q+ K + + G+ G N ++FVG L P+VT+
Sbjct: 108 KNGIVIPGFP--------------QRRLKLNWA-SAGANGNNS--GFSVFVGDLSPNVTE 150
Query: 289 DILKTVF-GQY-----GELVHVKIPAGKRC-GFVQFANRTCAEQALSVLNGTQLGGQSIR 341
L +F G+Y ++VH ++ +C GFV+F + T ++ L + G L G+SI+
Sbjct: 151 AQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSATDQQRVLVEMQGVFLNGRSIK 210
Query: 342 LSWGRSPSNKQSDQAQWNGG 361
+ N S+ GG
Sbjct: 211 VGLTGGAHNDNSNTNSMAGG 230
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 183/400 (45%), Gaps = 75/400 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P ++S I I+ GE ++ +++ N +N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKSTIRQIWASLGEANINVRMMWNNPSNNGPRSPLGQKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ---------DDGPDFTIFVGDL 174
A L NG +P+ + +LNWAT G +++IFVGDL
Sbjct: 116 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNSNTSNTVNNTAKSGNNYSIFVGDL 174
Query: 175 AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
A +VT+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV
Sbjct: 175 APNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHLALSEMQGVFL 234
Query: 235 STRPMRIGPAA------------------------------TKKAATGQQYQKATYQNTQ 264
+ R +++GP A ++ G K + +
Sbjct: 235 NGRAIKVGPTAGQQQQNMHANGNSRSFSSLNNENMDPRFSSKNQSLLGNVANKMSLKRNY 294
Query: 265 GSQ------------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
SQ DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK C
Sbjct: 295 TSQFIYPVQQQPSLTHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGC 354
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----KQSDQAQWNGGGYYGFAQ 368
GFVQ+ +R AE A+S + G + +RLSWGRS +Q+ + A
Sbjct: 355 GFVQYVDRLSAEAAISGMQGFPIANSRVRLSWGRSAKQTALLQQAMLSNSLQVQQQQPAL 414
Query: 369 GYEAYGYAPPT-------QDPNMYYGGFPGYGTYQQPGSY 401
YGY P T Q N PG+ T P SY
Sbjct: 415 QQPNYGYIPSTTYENNVPQKNNTAAAMLPGFQTLNYPSSY 454
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 124/224 (55%), Gaps = 33/224 (14%)
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
R++ GP+F+IFVGDL +V +YVL F++ + S K AK++TD TG S+GYGFVRF DE
Sbjct: 21 REERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDE 80
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE---------- 269
++Q R+++EM GV C RPMRI A K A G G
Sbjct: 81 TDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAG 140
Query: 270 -----------------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
DPNNTT+FVGGL VT+D L++ F +GE+ +VKI
Sbjct: 141 GPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKI 200
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
P GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 201 PPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 244
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 75 SLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL P + E + S+F S K++ + T S GYGF+ F +R L
Sbjct: 29 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 88
Query: 134 TFNGT 138
G
Sbjct: 89 EMQGV 93
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 276 TIFVGGLDPSVTDDILKTVF-GQYGELVHVKIPA------GKRCGFVQFANRTCAEQALS 328
+IFVG L P V + +L ++F ++ KI + GFV+F++ T ++ALS
Sbjct: 29 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 88
Query: 329 VLNGTQLGGQSIRLSWGRSPSNK 351
+ G G + +R+S +P NK
Sbjct: 89 EMQGVYCGNRPMRISTA-TPKNK 110
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 158/314 (50%), Gaps = 47/314 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-----------SEGYGFIEFVS 124
L++GDL P +E+ I I+G GE S VIR N + GY F+EF S
Sbjct: 47 LYMGDLDPSWDENTIRQIWGSLGE--SNVVIRLMLHNNVSGSGTMGPRNNLGYCFLEFPS 104
Query: 125 HAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A L NG Q+P+ + +LNWA+ + ++++FVGDLA +VT+ L
Sbjct: 105 TVHASNALLK-NGMQIPNFVHKRLKLNWASSSHSSAGAFN--EYSVFVGDLAPNVTESQL 161
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E F + ++S K+V D+ TG SKGY FV+F + + Q R++ EM G+ S R +R+
Sbjct: 162 FELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALLEMQGIFLSGRAIRVSN 221
Query: 244 AAT-------KKAATGQQYQKATYQNTQGSQGEN-----------------------DPN 273
A K ATG + G N DPN
Sbjct: 222 AGHLQNSADGKSKATGAASASNANAVGGINTGNNSGLMSGSQFMYPVQPQPALNSFTDPN 281
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT+FVGGL V +D L+ F +G +V+VKIP GK CGFVQ+ +R AE A++ + G
Sbjct: 282 NTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRISAETAIAKMQGF 341
Query: 334 QLGGQSIRLSWGRS 347
+G +RLSWGRS
Sbjct: 342 PIGNSRVRLSWGRS 355
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 130
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY + T N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 248 GDGQYGR-TELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+F + A A+ +NG +L GQ+I+ SWGR+P
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 344
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 49 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 108
Query: 308 -AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+FA+ A QAL +N L + ++++W P
Sbjct: 109 GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEP 150
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 155/289 (53%), Gaps = 10/289 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 130
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 131 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 187
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 188 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 247
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY ++ N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 248 GDGQYGRSEL-NYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 306
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
FV+F + A A+ +NG +L GQ+I+ SWGR+P + +N
Sbjct: 307 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTPEGHSQQASAYN 355
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 49 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 108
Query: 308 -AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+FA+ A QAL +N L + ++++W P
Sbjct: 109 GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEP 150
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 47 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 103
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 104 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 160
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 161 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 220
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY + T N + P+NT+++VG ++ S D+ L+ F ++G ++ V+I +
Sbjct: 221 GDGQYGR-TELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKFGRILEVRIFKSQ 279
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+F + A A+ +NG +L GQ+I+ SWGR+P
Sbjct: 280 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 22 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 81
Query: 308 -AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+FA+ A QAL +N L + ++++W P
Sbjct: 82 GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEP 123
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 159/315 (50%), Gaps = 44/315 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSE---GYGFIEFVSHAAAERV 131
L++GDL P +E+ + I+ GE G +++ +F GY F+EF S A A
Sbjct: 86 LYMGDLDPSWDEAVVKGIWAALGEENIGVRMMWGGDADFHRKNLGYCFVEFPSPAHASNA 145
Query: 132 LQTFNGTQMPS-TEQNFRLNWA----TYGAGERRQDDG-----PDFTIFVGDLAADVTDY 181
L NG ++P + +LNW+ G+G + + +IFVGDLA VT+
Sbjct: 146 LMK-NGMEIPGFVHKKLKLNWSAQSVNNGSGASVANGAVANQQTNNSIFVGDLAPSVTEA 204
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L + F Y S AKV+ D+ TG SKGYGFV+F +Q R++ EM G + R ++I
Sbjct: 205 QLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKI 264
Query: 242 GPAA------TKKAATGQQYQKATYQNTQGSQGEN-----------------------DP 272
G A + Q+ N G Q + DP
Sbjct: 265 GIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQFVNATPQQPVLNHFTDP 324
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
NNTT+FVGGL P VT+D L++ F +G +++VKIPAGK CGFVQ+ R+ AE A++ + G
Sbjct: 325 NNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVERSSAETAITKMQG 384
Query: 333 TQLGGQSIRLSWGRS 347
+ +RLSWGRS
Sbjct: 385 FPIANSRVRLSWGRS 399
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 163/333 (48%), Gaps = 62/333 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ I I+ GE V+ +++ N +N ++GY FI+F S
Sbjct: 46 LYMGDLDPTWDKNTIRQIWTSLGEANVNVRMMWNNPSNNGSRPSVGPKNNQGYCFIDFPS 105
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGER----RQDDGPDFTIFVGDLAADVT 179
A L NG +P+ + +LNWAT G ++IFVGDLA +VT
Sbjct: 106 STHAANALLK-NGMLIPNFPNRKLKLNWATSSYSNNINGANMKSGNSYSIFVGDLAPNVT 164
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L F Y+S AK+V D+ TG SKGYGFV+F + E+ +++EM GV + R +
Sbjct: 165 ESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALSEMQGVFLNGRAI 224
Query: 240 RIGPAATK---------------------------KAATGQQYQKATYQNTQGSQGEN-- 270
++GP + + + + Q N S+G N
Sbjct: 225 KVGPTSGQQQQNVHVNGNIDQGRSSSSLNNENFDPRFHSKNQSLLGNVANNMSSKGNNVS 284
Query: 271 ----------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGF
Sbjct: 285 QFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGF 344
Query: 315 VQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
VQ+ +R AE A++ + G + +RLSWGRS
Sbjct: 345 VQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 377
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 167/331 (50%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLAA+V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAANV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATYQ-NTQG-------------SQGEN------------ 270
+++GP + ++ + Y +++ N + S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 166/356 (46%), Gaps = 86/356 (24%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ---------TNFS---------- 114
R+LW+GDL P +E I I+ G+ VS K++R K+ TN S
Sbjct: 37 RTLWMGDLDPTFDELTIKEIWKRLGKNVSIKLVRAKKNLLIPCSSFTNNSGGNSKNETEE 96
Query: 115 --------------------EGYGFIEFVSHAAAERVLQTFNGTQMP-----STE----- 144
GY FIEF S A+ L + N +P STE
Sbjct: 97 SSITINGISFIDPMTTQLHHAGYCFIEFDSLKDAQFGL-SLNSKPIPNFKSISTELETNP 155
Query: 145 ---QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVT 201
+ FRLNWA+ + P++++FVGDL+ T+ L + F+ + SVK +V+T
Sbjct: 156 SGQRTFRLNWASGATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKSVKTVRVMT 215
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ------- 254
D TG S+ +GF+R DE E+ ++ +MNG L R +R+ A + A +Q
Sbjct: 216 DPITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALANPRNANLQEQAPSQVVE 275
Query: 255 -----------------YQKATYQNTQGS---------QGENDPNNTTIFVGGLDPSVTD 288
+ K +N+ + +NDP NTT+FVG L+ +T+
Sbjct: 276 DKKKHNEPLLLETAKKLFSKELLKNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKITE 335
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSW 344
D L+ VF +G + VKIP GK+CGFV+F N+ AE ++ L G + G IR+SW
Sbjct: 336 DELQKVFEPFGAIEKVKIPPGKKCGFVKFCNKIDAEASMYGLQGYFVAGSPIRISW 391
>gi|294659018|ref|XP_461354.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
gi|202953554|emb|CAG89760.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
Length = 477
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 182/356 (51%), Gaps = 33/356 (9%)
Query: 19 QHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWI 78
+ ++ + Q QSQ QQ++ P Q PP Q + S++ LW+
Sbjct: 43 NYNKYNSNQYQSQVQQRK-----PYNRSNNYQANYPPRNNYQNSYDQGNHSAENQNQLWM 97
Query: 79 GDLQPWMEESYIASIFGHTGEF-VSGKVIRNK------QTNFSEGYGFIEFVSHAAAERV 131
GDL P +E+ I I+ GE V+ K+IR+K + + GY F+ F + A
Sbjct: 98 GDLDPSWDENAIKKIWSAFGETPVAVKIIRDKFAVDSTDSKSNAGYCFVSFANQKAVSTA 157
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG--------PDFTIFVGDLAADVTDYVL 183
+ NG Q+P + + F+LNWA+ Q++ D++IFVGDL +DVT+ +L
Sbjct: 158 VLK-NGLQIPGSTKVFKLNWASGSGSTIPQENNFKPIGKTHNDYSIFVGDLGSDVTEPML 216
Query: 184 QETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
E F VY + VK AK++ D T SKG+GFVRF Q +++ EMNG + +RP+R+G
Sbjct: 217 FECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKALNEMNGTIAGSRPIRVG 276
Query: 243 PAA-TKKAATGQ----QYQKATYQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDIL 291
AA + A GQ + + N +Q DPNNTTI + GL ++D L
Sbjct: 277 MAAGSSNNAVGQDTFSKSETPVASNVHIAQPQPSLNAHTDPNNTTIIIKGLSSKFSEDEL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ F +G++V+ K+ + G +++ R+ AE AL ++G+ + ++WG+S
Sbjct: 337 CSYFIAFGDIVYCKLSSDFNSGIIKYFLRSSAESALLFMHGSIANDCRVVVNWGKS 392
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR-----TTGRSK-GYGFVRFGDESEQ 222
+++GDL + +++ + A + K++ D+ T +S GY FV F ++ +
Sbjct: 95 LWMGDLDPSWDENAIKKIWSAFGETPVAVKIIRDKFAVDSTDSKSNAGYCFVSFANQ-KA 153
Query: 223 LRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ + NG+ ST+ ++ A+ + Q+ T N+ +IFVG
Sbjct: 154 VSTAVLKNGLQIPGSTKVFKLNWASGSGSTIPQENNFKPIGKTH--------NDYSIFVG 205
Query: 281 GLDPSVTDDILKTVFGQY--GELVHVKI------PAGKRCGFVQFANRTCAEQALSVLNG 332
L VT+ +L F + ++ KI K GFV+F+ ++AL+ +NG
Sbjct: 206 DLGSDVTEPMLFECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKALNEMNG 265
Query: 333 TQLGGQSIRLSWGRSPSN 350
T G + IR+ SN
Sbjct: 266 TIAGSRPIRVGMAAGSSN 283
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 119/197 (60%), Gaps = 21/197 (10%)
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQ--YQKATYQNTQGSQG------ENDPNNTTI 277
MTEMN V CSTRPMRI A KK+A QQ K YQ S +D NNTTI
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSDDQNNTTI 60
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
FVGGLDP+V+D+ L+ +FGQ+GELV+VKIP K CGFVQF NR CAE+AL ++GT +G
Sbjct: 61 FVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIGQ 120
Query: 338 QSIRLSWGRSPSNK----------QSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY-Y 386
Q++RLSWGRSP+ K Q+D QWNG Y AP QDP+ Y Y
Sbjct: 121 QTVRLSWGRSPATKQDQPAGWGQAQADANQWNGAYYGYGQGYDAYGYAAP--QDPSTYGY 178
Query: 387 GGFPGYGTYQQPGSYQQ 403
G +P G YQQ Q+
Sbjct: 179 GAYPSSGNYQQQTEVQE 195
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + IFG GE V K+ NK G GF++F + A AE LQ
Sbjct: 59 TIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNK------GCGFVQFGNRACAEEALQR 112
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDG 164
+GT + +Q RL+W A ++ Q G
Sbjct: 113 VHGTVI--GQQTVRLSWGRSPATKQDQPAG 140
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G+L P + E +I ++FG G KVI + ++ Y F+EF H A + LQ
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGT---NDPYAFVEFADHYTAAQALQ 149
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + + D F +FVGDL+ +V + L++ F A +
Sbjct: 150 AMNKRVL--LEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAF-APFGE 206
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V AKV+ D TT +SKGYGFV + E R++ +MNG R +R A K TG
Sbjct: 207 VSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTGA 266
Query: 254 ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
QY ++ N + P+NT+++VG ++ + D+ L+ F ++G ++ V+I +
Sbjct: 267 GDGQYGRSEL-NYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKFGRILEVRIFKSQ 325
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+F + A A+ +NG +L GQ+I+ SWGR+P
Sbjct: 326 GYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 363
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
A +Y QN G D T++VG LDPS+T+D + T+FGQ G + K+
Sbjct: 68 AYNARYHFQAAQNAGFDTGSEDHQPRTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFD 127
Query: 308 -AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
FV+FA+ A QAL +N L + ++++W P
Sbjct: 128 GTNDPYAFVEFADHYTAAQALQAMNKRVLLEKEMKVNWATEP 169
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 163/331 (49%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGE---- 269
+++GP + ++ + GQ + N + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNDMSQF 294
Query: 270 -------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 166/331 (50%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATY----QNTQG----------SQGEN------------ 270
+++GP + ++ + Y +++ +N S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNXMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 62/332 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGEN--- 270
+++GP + ++ + GQ + + NT G + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSF-LSNGNNTMGFKRNHMSQ 293
Query: 271 ---------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFV
Sbjct: 294 FIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFV 353
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
Q+ +R AE A++ + G + +RLSWGRS
Sbjct: 354 QYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 62/332 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNXSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGEN--- 270
+++GP + ++ + GQ + + NT G + +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSF-LSNGNNTMGFKRNHMSQ 293
Query: 271 ---------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFV
Sbjct: 294 FIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFV 353
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
Q+ +R AE A++ + G + +RLSWGRS
Sbjct: 354 QYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 162/331 (48%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGE---- 269
+++GP + ++ + GQ + N +
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMDFKRNHMSQF 294
Query: 270 -------------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 166/331 (50%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATY----QNTQG----------SQGEN------------ 270
+++GP + ++ + Y +++ +N S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 166/331 (50%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATY----QNTQG----------SQGEN------------ 270
+++GP + ++ + Y +++ +N S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 172/370 (46%), Gaps = 73/370 (19%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++G+L P E+ I SI+ GE ++ K+I NK ++GY FIEF S A L
Sbjct: 72 IYMGELDPTWTEATIKSIWKSLGEELINVKLIWNKNLGLNQGYCFIEFPSEQHASNALLK 131
Query: 135 FNGTQMPST-EQNFRLNWATYGAGERRQ--------DDGPDFTIFVGDLAADVTDYVLQE 185
NG +P + +LNW + + + ++++FVGDLAA+VT+ L +
Sbjct: 132 -NGINIPEFPRKKVKLNWTSSSSASLQGSSNSGQVPSTSTNYSVFVGDLAANVTEGQLFD 190
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + S AK+V D T SK YGFV+F D +Q R++ EM G+ + R ++IG
Sbjct: 191 LFISRFQSTCHAKIVHDPVTRASKCYGFVKFNDLRDQQRALVEMQGIFLNGRAIKIGTTT 250
Query: 246 TKKAATGQQYQKATYQNTQGSQGEN----------------------------------- 270
A T A N S G++
Sbjct: 251 GGSAHTNTD-NNALAPNIANSGGKSRFQGTTTNSPSSPANIGRGNTSNYRLTSLSSQFIF 309
Query: 271 ------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
DPNNTT+FVGGL VT++ L+ F +G +++VKIP GK CGFVQ+
Sbjct: 310 PVQQQPPLNHFTDPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYF 369
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYE---AYGY 375
+R AE A+ + G +G IRLSWGR S++Q QA AQ YGY
Sbjct: 370 DRISAETAILRMQGFPIGNSRIRLSWGR--SSRQQGQA---------LAQPVLQEPIYGY 418
Query: 376 APPTQDPNMY 385
P PN +
Sbjct: 419 VPNPDVPNTF 428
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 154/304 (50%), Gaps = 36/304 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVI---RNKQTNFSEGYGFIEFVSHAAAERV 131
L++GDL P +E+ I SI+ GE V K++ RN GY F++F S + A
Sbjct: 50 LYMGDLDPSWDENVIRSIWNSLGESNVEIKLMWNNRNAGVRTHLGYCFVQFSSRSQASNA 109
Query: 132 LQTFNGTQMPS-TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
L NG +P + RLNW++ A D + ++FVGDLA +VT+ L E F +
Sbjct: 110 LLK-NGMAIPGYPSKTLRLNWSS--ASGNSADGSNEISVFVGDLAPNVTESDLFELFISK 166
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-- 248
S AKV+ D+ TG SKGY FVRFG++ +Q R++ EM G R +R+G A +
Sbjct: 167 CPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGTFLKGRAIRVGSAGHQNQR 226
Query: 249 --------------AATGQQYQKATYQNTQGSQ------------GENDPNNTTIFVGGL 282
AT + A +T SQ D NNTT+FV L
Sbjct: 227 NRNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQLPPLNSFTDRNNTTLFVSSL 286
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
VT++ LK F +G +++ K+P K+CGFVQ+ +R AE A+ L G + G I++
Sbjct: 287 SHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQYVDRASAEMAILKLQGFPIRGSRIKI 346
Query: 343 SWGR 346
SWGR
Sbjct: 347 SWGR 350
>gi|410924257|ref|XP_003975598.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 340
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 133/212 (62%), Gaps = 10/212 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+MEE +I F GE +G K+I +K T S GY F+E A+ ER +Q
Sbjct: 7 SLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCVQ 66
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG +R + GP+F++FVGDLA+DV D+ LQ+ F+ Y
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASDVQDFQLQQVFKN-Y 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KA 249
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + S +P+R+ A K K
Sbjct: 123 PSCKGAKVVTDQY-GYSRGYGFVKFGEESEQKKAIEECQGTMLSGKPLRLSVAVAKSQKI 181
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ Q Q Y + SQ +N ++ GG
Sbjct: 182 SSYQGGQGQNYSSYNQSQSNYYGSNNSVAQGG 213
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++++GDL + + +++ F A+ S G K++T + TG S GY FV DE+ R +
Sbjct: 6 MSLWMGDLDPYMEEDFIKQAFSAMGESPTGVKIITHKITGGSAGYCFVELADEASVERCV 65
Query: 227 TEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+NG L S P + + ATY G + E P ++FVG L
Sbjct: 66 QRLNGKLVPGSNPPRKF------------KLNYATY----GKRPEAGPE-FSVFVGDLAS 108
Query: 285 SVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
V D L+ VF Y K+ + GFV+F + ++A+ GT L G+
Sbjct: 109 DVQDFQLQQVFKNYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLSGKP 168
Query: 340 IRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTY 395
+RLS + S K S G Y + Q Y + + YY + GY Y
Sbjct: 169 LRLSVAVAKSQKISSYQGGQGQNYSSYNQSQSNYYGSNNSVAQGGYYSQWGGYDQY 224
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 147/296 (49%), Gaps = 37/296 (12%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL +E ++ I+ GE N Y FI F+ A L
Sbjct: 34 LYMGDLDLSWDERVVSQIWASLGE-------PNVSVKMMNRYCFITFLDSLTASNALLK- 85
Query: 136 NGTQMPSTE-QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
NG +P + +LNWA + + ++IFVGDL+ +VT+ L + F Y+S
Sbjct: 86 NGMLIPGYGGKRLKLNWA-----QASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYAST 140
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
AK+V D+ TG S+GYGFVRF +Q ++ EM G+ + R ++IG K+
Sbjct: 141 DHAKIVYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQGQ 200
Query: 254 --------QYQKATYQNTQGSQGE--------------NDPNNTTIFVGGLDPSVTDDIL 291
++ NT +Q + DPNNTT+FVGGL VT+D L
Sbjct: 201 QHQGQQQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDEL 260
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ F +G +V+VKIP GK CGFVQ+ +R AE A+S + G + IRLSWGRS
Sbjct: 261 REYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGFPIANSRIRLSWGRS 316
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 160/329 (48%), Gaps = 60/329 (18%)
Query: 78 IGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVSHA 126
+GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 1 MGDLDPTWDKNTVRXIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSST 60
Query: 127 AAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADVTD 180
A L NG +P+ + +LNWAT G + +IFVGDLA +VT+
Sbjct: 61 HAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTE 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R ++
Sbjct: 120 SQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIK 179
Query: 241 IGPAA-------------------------TKKAATGQQYQKATYQNTQGSQGE------ 269
+GP + ++ + GQ + N +
Sbjct: 180 VGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMXFKRNHMSQFIY 239
Query: 270 -----------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFA 318
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ+
Sbjct: 240 PVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYV 299
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+R AE A++ + G + +RLSWGRS
Sbjct: 300 DRLSAEAAIAGMQGFPIANSRVRLSWGRS 328
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F++FVGDL +V D+ L+ FR + SV+ AKV+ D TGRSKG+GFVRF E E+ R++
Sbjct: 12 FSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRAL 71
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
EMNGV S+R + +A A TQ GE DP NTT+FVGGL V
Sbjct: 72 NEMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQ-LPGELDPQNTTLFVGGLSAHV 130
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
++D L+ VFG+YGE+ +VKIP GK CGFV FA+R AE A+ +NGT +GG +
Sbjct: 131 SEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTIIGGSA 183
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SL++GDL P + + ++ S F V S KV+ + T S+G+GF+ F +R L
Sbjct: 13 SLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGERDRALN 72
Query: 134 TFNGTQMPSTEQNFRLNWATYGA----------------GERRQDDGPDFTIFVGDLAAD 177
NG + S + + + A GE D + T+FVG L+A
Sbjct: 73 EMNGVFISSRQHTLSASAVSALAPCASNTHCRNTPTQLPGEL---DPQNTTLFVGGLSAH 129
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
V++ L+ F Y + K+ KG GFV F D +M E+NG +
Sbjct: 130 VSEDALRGVF-GRYGEISYVKIPP------GKGCGFVHFADRQAAEYAMQEVNGTI 178
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 58/291 (19%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPST-------------EQNFRLNWATYGAGERRQD 162
GY F+EF + A+ L + N +P+ ++NFRLNWA+ +
Sbjct: 165 GYCFVEFQNQEDAQYAL-SLNSNPIPNILSDSNNLYTNPTGKRNFRLNWASGATLQSSIP 223
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ T+ L F+ Y SVK +V+TD TG S+ +GF+RFGD+ E+
Sbjct: 224 VTPEFSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDER 283
Query: 223 LRSMTEMNGVLCSTRPMRIGPA-------------------------------------A 245
R+++EMNGV C RP+R+ A +
Sbjct: 284 KRALSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNRS 343
Query: 246 TKKAATGQQYQKATYQNTQGSQ-----GENDPNN--TTIFVGGLDPSVTDDILKTVFGQY 298
K +++ YQ NT Q N N +T+F+GGL P + + ++++F +
Sbjct: 344 RKNSSSILNYQNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPF 403
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
G +V+VK+P GK CGFV+F NR AE A+ L G + G IRLSWG++ S
Sbjct: 404 GNIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWGKASS 454
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 46/319 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P+PP S + SS+ R+LW+GDL P +ES I I+ V+ K+IR K+
Sbjct: 9 PLPPSS--------TIETSSEPPRTLWMGDLDPSFDESTIQQIWKSLDRLVTVKLIRAKK 60
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
I ++ + T + T++ S + + + E + +
Sbjct: 61 NLLIPCSSTINDSFSNSSNSLSPTNSSTRLSSAGSSASPTTVSSSSAENKSNS------I 114
Query: 171 VGDLAAD------VTDYVLQET------FRAVYSSVKGAKVVTDRTTG-RSKGYGFVRFG 217
+L+ D +T + +T + ++ G + T GY FV F
Sbjct: 115 TNNLSTDQTEDASITSNLDDDTNGGNQNLHKI--NINGVSFIDPSTVQLHHAGYCFVEFQ 172
Query: 218 DESEQLRSMT----EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPN 273
++ + +++ + +L + + P K+ AT Q++ E
Sbjct: 173 NQEDAQYALSLNSNPIPNILSDSNNLYTNPTG-KRNFRLNWASGATLQSSIPVTPE---- 227
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQ-YGELVHVK-----IPAGKRC-GFVQFANRTCAEQA 326
++FVG L P+ T+ L ++F Q Y + V+ I RC GF++F ++ ++A
Sbjct: 228 -FSLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDERKRA 286
Query: 327 LSVLNGTQLGGQSIRLSWG 345
LS +NG G+ +R+++
Sbjct: 287 LSEMNGVWCQGRPLRVAYA 305
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 114/177 (64%), Gaps = 8/177 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW GDL+P +ES+I+S+FG GE V G K+I+N+ T GY F++F + A RVL
Sbjct: 5 LWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRVLHA 64
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG Q+P + + FRLN A Y R + P++++FVGDL ADVTD+ L F+ +Y+
Sbjct: 65 LNGAQIPGLDPSRRFRLNLALYSGATRNE---PEYSLFVGDLTADVTDFQLHSFFKQLYA 121
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
S K AKVV D+ G KG+GFVRF D ++ LR++ EMNG + C +PMR+ A K+
Sbjct: 122 SCKTAKVVVDQ-AGTPKGFGFVRFTDSNDCLRALLEMNGAVGCGGKPMRVSAATPKR 177
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
+D NTT++VGGL P V+ + LK +F +G++V V+IP GK CGFVQFA AEQA++
Sbjct: 579 DDSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAH 638
Query: 330 LNGTQLGGQSIRLSWGR 346
LNG +GGQ IRLSWG
Sbjct: 639 LNGQYIGGQPIRLSWGH 655
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGE-LVHVKIPAGKRCG------FVQFANRTCAEQA 326
+T ++ G L+PS + + ++FGQ GE +V VKI + G FV F N A +
Sbjct: 2 STCLWFGDLEPSWDESFISSLFGQAGEPVVGVKIIKNRLTGGPAGYCFVDFGNSDRAVRV 61
Query: 327 LSVLNGTQLGG 337
L LNG Q+ G
Sbjct: 62 LHALNGAQIPG 72
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 150/293 (51%), Gaps = 61/293 (20%)
Query: 116 GYGFIEFVSHAAAERVLQTF--NGT----QMPSTEQNFRLNWATYGAGE--RRQDDGPDF 167
GY F+ F S + A+ VL NG+ MP++ + F LNWA+ +Q ++
Sbjct: 39 GYCFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWASSVPNTPIAQQQYPREY 98
Query: 168 TIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGYG 212
+IFVGDLA + ++ L FR + S K AK++ D TG S+GYG
Sbjct: 99 SIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYG 158
Query: 213 FVRFGDESEQLRSMTEMNGVLCSTRP-----------MRIG-----PAATKKAATGQQYQ 256
FVRF +E++Q R++ EM+G+ C +RP +++G PA A GQ
Sbjct: 159 FVRFTEEADQQRALIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGATFAPDGQDQN 218
Query: 257 ------------------KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTV 294
+A N G GE DP NTT+FVGGL P ++++ L+T
Sbjct: 219 GAPRYMISEESWKHHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTF 278
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F +G++ +VK+P GK CGFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 279 FAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 331
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 164/331 (49%), Gaps = 60/331 (18%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVS 124
L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 125 HAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQ-----DDGPDFTIFVGDLAADV 178
A L NG +P+ + +LNWAT G + +IFVGDLA +V
Sbjct: 116 STHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T+ L E F Y+S AK+V D+ TG SKGY V+F + EQ +++EM GV + R
Sbjct: 175 TESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQLALSEMQGVFLNGRA 234
Query: 239 MRIGPAATKK--AATGQQYQKATY----QNTQG----------SQGEN------------ 270
+++GP + ++ + Y +++ +N S G N
Sbjct: 235 IKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQF 294
Query: 271 --------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ
Sbjct: 295 IYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQ 354
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ +R AE A++ + G + +RLSWGRS
Sbjct: 355 YVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 158/287 (55%), Gaps = 19/287 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P E IA I+ GE VS K++++ + GY F+ F + A + L T
Sbjct: 85 VWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREP-GGGYCFVSFANANAVQTAL-T 142
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-----ERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+NG+ +P++ ++F+LN A+ G +R DF+IFVGDLA DV++ +L E F +
Sbjct: 143 YNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEPILYEAFNS 202
Query: 190 VY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA--- 245
++ VK K++ D +T SKG+GFVRF D + Q +++TE NG++ +R +R+G AA
Sbjct: 203 LFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRVGMAAGSN 262
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE--NDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
T + + A + + + +DP N TI V GL VT++ L +
Sbjct: 263 KPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEELALHLSSF 322
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
GE+++ + + G+V+F NR AE A+ + G + I++SWG
Sbjct: 323 GEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWG 369
>gi|414592073|tpg|DAA42644.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592074|tpg|DAA42645.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
gi|414592075|tpg|DAA42646.1| TPA: hypothetical protein ZEAMMB73_369374 [Zea mays]
Length = 207
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 25/184 (13%)
Query: 65 APD--ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
APD ASSDG RSLWIG L PWM+E Y+ F + E +S + RNKQT SEG+GF+
Sbjct: 24 APDSPASSDGAGPRSLWIGGLLPWMDEDYLYGCFTTSRELLSLVIKRNKQTGQSEGFGFL 83
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------------- 167
+F H AA +L+++NG +MP+ Q+F+LNWAT ++ D PDF
Sbjct: 84 KFSDHTAAAHILKSYNGQKMPNAVQDFKLNWATQQPAPKKLPD-PDFKLDLATQQERHAA 142
Query: 168 -------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+IFVGDLA +VT Y+L F+A Y SVK AK++ D+ TG SK YGFV+FGD
Sbjct: 143 VDSSSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVD 202
Query: 221 EQLR 224
EQ++
Sbjct: 203 EQIQ 206
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 158/287 (55%), Gaps = 19/287 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P E IA I+ GE VS K++++ + GY F+ F + A + L T
Sbjct: 85 VWMGDLDPRWNEQAIADIWSQIGESPVSIKIMKDGREP-GGGYCFVSFANANAVQTAL-T 142
Query: 135 FNGTQMPSTEQNFRLNWATYGAG-----ERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+NG+ +P++ ++F+LN A+ G +R DF+IFVGDLA DV++ +L E F +
Sbjct: 143 YNGSPIPNSSKHFKLNIASRGKNTATDIQRNSKPANDFSIFVGDLAMDVSEPILYEAFNS 202
Query: 190 VY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA--- 245
++ VK K++ D +T SKG+GFVRF D + Q +++TE NG++ +R +R+G AA
Sbjct: 203 LFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRVGMAAGSN 262
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE--NDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
T + + A + + + +DP N TI V GL VT++ L +
Sbjct: 263 KPQPVTNIVHSDRLASPAIEEEVKLPKHARFSDPTNNTIVVHGLSGKVTEEELALHLSSF 322
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
GE+++ + + G+V+F NR AE A+ + G + I++SWG
Sbjct: 323 GEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQIINDCRIQVSWG 369
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 101/130 (77%), Gaps = 5/130 (3%)
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
YQ++QG ENDPNNTT+FVGGLD +V ++ L+ +F +GE+ +VKIP GK CGFVQF +
Sbjct: 2 YQSSQGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFTS 61
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ---AQWNGGGYYGFA-QGYEAYGY 375
R+CAE+A+ +LNG+Q+GGQ +RLSWGR+ + + S Q +Q+NG YYG+ QGYE YGY
Sbjct: 62 RSCAEEAIQMLNGSQIGGQKVRLSWGRTQNRQASQQDANSQYNGNSYYGYRQQGYEGYGY 121
Query: 376 APP-TQDPNM 384
A P TQDP+M
Sbjct: 122 AAPNTQDPSM 131
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L + E Y+ IF GE K+ K GF++F S + AE +Q
Sbjct: 18 TVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHC------GFVQFTSRSCAEEAIQM 71
Query: 135 FNGTQMPSTEQNFRLNW 151
NG+Q+ Q RL+W
Sbjct: 72 LNGSQIGG--QKVRLSW 86
>gi|363742248|ref|XP_417743.3| PREDICTED: uncharacterized protein LOC419597 [Gallus gallus]
Length = 287
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 116/177 (65%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL ADV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|344287494|ref|XP_003415488.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Loxodonta africana]
Length = 287
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE VS K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVVSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 25/295 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS---EGYGFIEFVSHAAAER 130
R+L++G L P + E + IF TG VS K+I +K F+ YGF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAER 150
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 151 AMQTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA- 207
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F D +E +++ M+G +R +R A K
Sbjct: 208 FGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQP 267
Query: 251 TGQQYQKATYQN-------------TQGSQ-----GENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 268 SISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDL 327
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + FV+ + A A+ LNG + G+ ++ SWG+
Sbjct: 328 VPLFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 382
>gi|448107329|ref|XP_004205333.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|448110297|ref|XP_004201597.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359382388|emb|CCE81225.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359383153|emb|CCE80460.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 162/315 (51%), Gaps = 34/315 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSE-----GYGFIE 121
+S D LW+GDL+P +E I I+ GE S K+I++K T+ + GY F+
Sbjct: 70 SSFDNSNQLWMGDLEPSWDEKTIKKIWQSFGESPTSVKIIKDKFTSGNNKARNVGYCFVS 129
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP-----------DFTIF 170
F LQ NG Q+P + + +LNWA+ G+ +QD+ D++IF
Sbjct: 130 FPDSNTVASALQK-NGLQIPGSTKTLKLNWAS-GSNSLQQDNAKQGGRFSSKSQNDYSIF 187
Query: 171 VGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
VGDL DV++ +L E+F Y +K K++ D T SKG+GFV+F Q +++TEM
Sbjct: 188 VGDLGMDVSETLLFESFNRNYPGQIKQVKIMIDPVTKLSKGFGFVKFASPHSQQKALTEM 247
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-TQGSQGE-----------NDPNNTTI 277
NG +R +R+G A+ + Q+ K+ Y + SQ + DP NTT+
Sbjct: 248 NGYQVGSRSIRVGMASGSNMSINQE--KSPYPDGVSASQIQIPQYQPPLNHITDPENTTL 305
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
V GL + T D L F +G +VH I G ++F RT AE+A+ +G L G
Sbjct: 306 RVDGLPANFTPDDLALHFINFGNIVHCHISPDHSFGLIKFLVRTDAEKAMLYAHGAILDG 365
Query: 338 QSIRLSWGRSPSNKQ 352
++++WG++ ++ Q
Sbjct: 366 CRVKVTWGKNDTDSQ 380
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 247 KKAATGQQYQKA---TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--- 300
+K+A Y A +YQ++ Q + N+ +++G L+PS + +K ++ +GE
Sbjct: 45 RKSARPDSYNNANKPSYQHSSDQQASSFDNSNQLWMGDLEPSWDEKTIKKIWQSFGESPT 104
Query: 301 ---LVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGG--QSIRLSWGRSPS 349
++ K +G FV F + AL NG Q+ G ++++L+W +
Sbjct: 105 SVKIIKDKFTSGNNKARNVGYCFVSFPDSNTVASALQK-NGLQIPGSTKTLKLNWASGSN 163
Query: 350 NKQSDQAQWNG 360
+ Q D A+ G
Sbjct: 164 SLQQDNAKQGG 174
>gi|291400054|ref|XP_002716363.1| PREDICTED: tRNA selenocysteine associated protein 1 [Oryctolagus
cuniculus]
Length = 287
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + +LN+ATYG ++ D+ P++++FVGDL ADV + +L E F VY
Sbjct: 64 KINGKPLPGATPAKRLKLNYATYG---KQPDNSPEYSLFVGDLTADVDEGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++PMR+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPKAS 178
>gi|426221836|ref|XP_004005112.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Ovis aries]
Length = 287
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|115495097|ref|NP_001069435.1| tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|122145885|sp|Q1RMJ7.1|TSAP1_BOVIN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|92098413|gb|AAI14859.1| TRNA selenocysteine 1 associated protein 1 [Bos taurus]
gi|296490008|tpg|DAA32121.1| TPA: tRNA selenocysteine 1-associated protein 1 [Bos taurus]
gi|440905999|gb|ELR56315.1| tRNA selenocysteine 1-associated protein 1 [Bos grunniens mutus]
Length = 287
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+T+ +TG S+GYGFVRF D+ EQ +++TEMNG+LC RPMR+ AT K ++Y +
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNGILCKNRPMRVS-FATPKTNNQERYIQLA 59
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q Q DPNNTT+F+GGL VT+D L+ FG +G++++VK+P GK CGFVQ+
Sbjct: 60 LQAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTT 119
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
R AE A+ +NG +G IRLSWGRS SN QSD
Sbjct: 120 RISAETAIEKMNGFLIGTSRIRLSWGRS-SNHQSD 153
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ---- 161
+ N T S GYGF+ F ++ + NG + + R+++AT + +
Sbjct: 1 MTNSSTGLSRGYGFVRFSDQQEQQQAVTEMNG--ILCKNRPMRVSFATPKTNNQERYIQL 58
Query: 162 -----------DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
D + T+F+G L++ VT+ L++ F + + K+ KG
Sbjct: 59 ALQAPALVQQPTDPNNTTVFIGGLSSPVTEDELRQYF-GSFGDIMNVKLPP------GKG 111
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRI--GPAATKKAATGQQYQKA 258
GFV++ ++ +MNG L T +R+ G ++ ++ T Q A
Sbjct: 112 CGFVQYTTRISAETAIEKMNGFLIGTSRIRLSWGRSSNHQSDTMNSKQMA 161
>gi|73950095|ref|XP_535338.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Canis lupus familiaris]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|348571058|ref|XP_003471313.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Cavia
porcellus]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated protein 1 [Homo sapiens]
gi|149694993|ref|XP_001504030.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Equus
caballus]
gi|296207254|ref|XP_002750563.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Callithrix
jacchus]
gi|332245217|ref|XP_003271759.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Nomascus leucogenys]
gi|335290818|ref|XP_003356292.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Sus
scrofa]
gi|397515828|ref|XP_003828145.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
paniscus]
gi|403308350|ref|XP_003944628.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Saimiri
boliviensis boliviensis]
gi|410966601|ref|XP_003989819.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Felis catus]
gi|426328634|ref|XP_004025356.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426328636|ref|XP_004025357.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|74761781|sp|Q9NX07.1|TSAP1_HUMAN RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|7020651|dbj|BAA91217.1| unnamed protein product [Homo sapiens]
gi|12653787|gb|AAH00680.1| TRNA selenocysteine 1 associated protein 1 [Homo sapiens]
gi|119628094|gb|EAX07689.1| tRNA selenocysteine associated protein 1, isoform CRA_c [Homo
sapiens]
gi|261861114|dbj|BAI47079.1| tRNA selenocysteine 1 associated protein 1 [synthetic construct]
gi|410217052|gb|JAA05745.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410246780|gb|JAA11357.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410287892|gb|JAA22546.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
gi|410350233|gb|JAA41720.1| tRNA selenocysteine 1 associated protein 1 [Pan troglodytes]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|354472393|ref|XP_003498424.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Cricetulus griseus]
Length = 287
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|355726287|gb|AES08822.1| tRNA selenocysteine 1 associated protein 1 [Mustela putorius furo]
Length = 286
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|395856824|ref|XP_003800818.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Otolemur
garnettii]
Length = 287
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|12711700|ref|NP_075416.1| tRNA selenocysteine 1-associated protein 1 [Rattus norvegicus]
gi|81917757|sp|Q9QZI7.1|TSAP1_RAT RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|5853317|gb|AAD54419.1|AF181856_1 tRNA selenocysteine associated protein [Rattus norvegicus]
Length = 287
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|402853636|ref|XP_003891498.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Papio
anubis]
gi|355764244|gb|EHH62272.1| hypothetical protein EGM_20511 [Macaca fascicularis]
gi|380785637|gb|AFE64694.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|383411005|gb|AFH28716.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
gi|384939910|gb|AFI33560.1| tRNA selenocysteine 1-associated protein 1 [Macaca mulatta]
Length = 287
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 147/293 (50%), Gaps = 23/293 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ-TNFSEGYGFIEFVSHAAAERVL 132
R+L++G L P + E + IF TG VS K+I +K T YGF+EF AAER +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAM 150
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 QTLNGRRIHQSE--IRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FG 207
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV A+V+ D TGRS+GYGFV F D +E +++ M+G +R +R A K +
Sbjct: 208 SVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 267
Query: 253 QQYQKATYQN-------------TQGSQ-----GENDPN-NTTIFVGGLDPSVTDDILKT 293
Q Q T G Q + P TT +VG L P T + L
Sbjct: 268 SQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTPQWQTTCYVGNLTPYTTQNDLVP 327
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + FV+ + A A+ LNG + G+ ++ SWG+
Sbjct: 328 LFQNFGYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 380
>gi|62821783|ref|NP_082201.2| tRNA selenocysteine 1-associated protein 1 [Mus musculus]
gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=SECp43; AltName: Full=tRNA
selenocysteine-associated protein 1
gi|33416825|gb|AAH55454.1| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|66840156|gb|AAH48840.2| TRNA selenocysteine 1 associated protein 1 [Mus musculus]
gi|74225435|dbj|BAE31634.1| unnamed protein product [Mus musculus]
gi|148698163|gb|EDL30110.1| tRNA selenocysteine associated protein 1, isoform CRA_a [Mus
musculus]
Length = 287
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|355557743|gb|EHH14523.1| hypothetical protein EGK_00465, partial [Macaca mulatta]
Length = 242
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKAS 178
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P + +FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPEYS-LFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|301755122|ref|XP_002913378.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like isoform
1 [Ailuropoda melanoleuca]
Length = 287
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 117/179 (65%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R+++E G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPVRLSVAIPKAS 178
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++ALS G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALSECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|197101902|ref|NP_001127022.1| tRNA selenocysteine 1-associated protein 1 [Pongo abelii]
gi|75070420|sp|Q5R462.1|TSAP1_PONAB RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|55733553|emb|CAH93454.1| hypothetical protein [Pongo abelii]
Length = 287
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 8/179 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ TYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 121 PSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y T G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNYV------TYGKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V + K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|387019429|gb|AFJ51832.1| tRNA selenocysteine 1-associated protein 1 [Crotalus adamanteus]
Length = 286
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 116/177 (65%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F G+ V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL+ DV D ++ E F VY
Sbjct: 64 KINGKPLPGATPTKRFKLNYATYG---KQPDNSPEYSLFVGDLSPDVDDGMIYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ TG SKGYGFV+F DE EQ R++ E G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVVDQ-TGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPIRLSVAIPK 176
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGQLVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPTKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLSPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D ++ F + G++V + K GFV+F++ ++AL G LG + I
Sbjct: 109 DGMIYEFFVKVYPSCRGGKVVVDQTGVSKGYGFVKFSDELEQKRALVECQGAVGLGSKPI 168
Query: 341 RLSWGRSPSNK 351
RLS +N+
Sbjct: 169 RLSVAIPKANR 179
>gi|116283942|gb|AAH05795.1| Trnau1ap protein [Mus musculus]
Length = 221
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 114/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+ A K
Sbjct: 121 PSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPK 176
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F + +V K++ +R TG GY FV F D + + +
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT Y ATY G Q +N P ++FVG L P V
Sbjct: 64 KING-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVD 108
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSI 340
D +L F + G++V K GFV+F + ++AL+ G LG + +
Sbjct: 109 DGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPV 168
Query: 341 RLS 343
RLS
Sbjct: 169 RLS 171
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 19/283 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G S K+I ++ NFS G YGF+E+ AAE L
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDR--NFSHGGLNYGFVEYTDMRAAETAL 74
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y +++D F +FVGDL+ +V D +L + F +
Sbjct: 75 QTLNGRKIFDTE--IRVNWA-YQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSG-FK 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D TG+S+GYGF+ F ++++ ++++ MNG +R +R+ A +K TG
Sbjct: 131 SISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVN-WANQKTQTG 189
Query: 253 QQYQKATYQNTQGSQG---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
G + NTT+++G L P T L +F +G ++
Sbjct: 190 SHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIE 249
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
V++ A + FV+ + A A+ L GT + G+ I+ SWGR
Sbjct: 250 VRMQADRGFAFVKLDSHENASMAIVQLQGTLIQGRPIKCSWGR 292
>gi|348531393|ref|XP_003453194.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Oreochromis niloticus]
Length = 360
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 124/200 (62%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ ER +Q
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG +R + GP+F++FVGDLA+++ D+ L + F+ Y
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASEIDDFQLHQVFKK-Y 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + +P+R+ A K
Sbjct: 123 PSCKGAKVVTDQ-YGYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSIAVAKSQKM 181
Query: 248 ---KAATGQQYQKATYQNTQ 264
GQ YQ + Y TQ
Sbjct: 182 SSYHGGQGQNYQ-SNYNQTQ 200
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 43/250 (17%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F A+ S G K++T R TG S GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVERCVQ 66
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG L S P + + ATY G + E P ++FVG L
Sbjct: 67 RLNGKLVPGSNPPRKF------------KLNYATY----GKRPEAGP-EFSVFVGDLASE 109
Query: 286 VTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ D L VF +Y K+ + GFV+F + ++A+ GT LGG+ +
Sbjct: 110 IDDFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPL 169
Query: 341 RLSWGRSPSNKQSD---------QAQWN--GGGYYGFAQGYEAYGYAPPTQDPNMYYGGF 389
RLS + S K S Q+ +N GYYG G +Q +GG+
Sbjct: 170 RLSIAVAKSQKMSSYHGGQGQNYQSNYNQTQSGYYGSHSG--------GSQGYYSQWGGY 221
Query: 390 PGYGTYQQPG 399
YG Y G
Sbjct: 222 DQYGGYNSTG 231
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 79/357 (22%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNK----QTNFS----EGYGFIEFVS 124
R+LW+GDL PW++ES I ++ VS K+I+ K ++ F+ GY F+EF S
Sbjct: 73 RTLWMGDLDPWLDESAIVDLWWQILRSKVSVKLIKPKFIKPESGFTGLSHSGYCFVEFQS 132
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
+ A+ L NG +P ++ FRLNWA+ P++++
Sbjct: 133 YEEAQSAL-ALNGQLLPDIAMPSQKHFPNNPDNQKKYFRLNWASGATLTAPLIHTPEYSL 191
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ---LRS 225
FVGDL A T+ L F+ + +S++ +V+TD +G+S+ +GFVRF +ESE+ LR
Sbjct: 192 FVGDLTASTTEAHLLSFFQKSFPNSIRTVRVMTDPVSGKSRCFGFVRFTEESERQRALRE 251
Query: 226 M---------------TEMNGVLCSTRPMR------IGPAATKKAATGQQY--------- 255
M T N L P + + PA + A Q
Sbjct: 252 MNGAWFGGRPLRVALATPRNTALLRKSPDQKNMYSGLSPAVPQSPAMIPQEFMYMGGPQG 311
Query: 256 --------------------QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
K + +DP+NTT+FVGGL V++ L T+F
Sbjct: 312 SGGPPGPMNSSYGYFPPMMGDKNEFGMNMAGHPYSDPSNTTVFVGGLRSEVSEQTLFTLF 371
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
+G + +KIP GK CGF++++ R AE+A+ + G +GG +RL WGR +N +
Sbjct: 372 KPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAMEGFIIGGNRVRLGWGRVSANNK 428
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 149/281 (53%), Gaps = 13/281 (4%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E +IA++F G KVI + ++ Y F+EF H A
Sbjct: 38 SDEPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGA---NDPYAFVEFSDHGQAS 94
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F
Sbjct: 95 QALQTMNKRLLHDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAF- 151
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 152 IPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 210
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + + Y + N +NT+++VG + ++T+D ++ F YG + V+I
Sbjct: 211 --PGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNI-ANLTEDEIRQAFASYGRISEVRI 267
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ FV+F N+ A +A++ +N +GGQ +R SWG++
Sbjct: 268 FKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWGKT 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LDPSV++D + T+F Q G + K+ A FV+F++ A QAL +N
Sbjct: 43 TLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHGQASQALQTMNK 102
Query: 333 TQLGGQSIRLSWGRSP 348
L + ++++W P
Sbjct: 103 RLLHDREMKVNWAVEP 118
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 29/312 (9%)
Query: 57 QQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++++
Sbjct: 45 QQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS- 103
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
YGF+++ +A + T NG Q+ Q R+NWA Y +G+R +D F IFVGD
Sbjct: 104 ---YGFVDYYDRRSAALAILTLNGKQIFG--QLIRVNWA-YASGQR-EDTTDHFNIFVGD 156
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+ +VTD L F YSS A+V+ D+ TGRS+GYGFV F ++ + ++ ++NG
Sbjct: 157 LSPEVTDSALFAFFSG-YSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 234 CSTRPMRIGPAATKKAATGQQ-----YQKATYQNTQGSQG---------ENDPNNTTIFV 279
+R +R ATK A+ G+Q A N G EN+P T++V
Sbjct: 216 LGSRQIRCN-WATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYV 274
Query: 280 GGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
G L VT D+L +F G + V+I GK GFV++++ T A A+ + NG LGG
Sbjct: 275 GNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMGNGRILGG 334
Query: 338 QSIRLSWGRSPS 349
+ I+ SWG P+
Sbjct: 335 KPIKCSWGNKPT 346
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VT+ +L+ VF G + K+ ++ GFV + +R A A+ LNG
Sbjct: 66 SVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAILTLNGK 125
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
Q+ GQ IR++W + ++ +N
Sbjct: 126 QIFGQLIRVNWAYASGQREDTTDHFN 151
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 174/350 (49%), Gaps = 44/350 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 138
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 139 AMQTLNGRRV--HQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 195
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------P 243
+ +V A+V+ D TGRS+GYGF F D E ++++ M+G +R +R P
Sbjct: 196 FGTVSEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 255
Query: 244 AATKKAATGQQYQKATYQ------NTQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ +++ A Q T TQGSQ + P TT++VG L P T + L
Sbjct: 256 SFSQQQAMAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDL 315
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSN 350
+F +G + + + + F++ A A+ L+G Q+ G+ ++ SWG+ P
Sbjct: 316 VPLFQNFGYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPT 375
Query: 351 KQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGS 400
Q D GF+ + G A P+ P + FP YQQPG+
Sbjct: 376 GQFD----------GFSPAAQTPGSAFPSATPQAF---FP---QYQQPGA 409
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 164/312 (52%), Gaps = 29/312 (9%)
Query: 57 QQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++++
Sbjct: 45 QQIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS- 103
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
YGF+++ +A + T NG Q+ Q R+NWA Y +G+R +D F IFVGD
Sbjct: 104 ---YGFVDYYDRRSAALSILTLNGKQIFG--QLIRVNWA-YASGQR-EDTTDHFNIFVGD 156
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+ +VTD L F YSS A+V+ D+ TGRS+GYGFV F ++ + ++ ++NG
Sbjct: 157 LSPEVTDSALFAFFSG-YSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQW 215
Query: 234 CSTRPMRIGPAATKKAATGQQ-----YQKATYQNTQGSQG---------ENDPNNTTIFV 279
+R +R ATK A+ G+Q A N G EN+P T++V
Sbjct: 216 LGSRQIRCN-WATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYV 274
Query: 280 GGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
G L VT D+L +F G + V+I GK GFV+++N A A+ + NG LGG
Sbjct: 275 GNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGG 334
Query: 338 QSIRLSWGRSPS 349
+ I+ SWG P+
Sbjct: 335 KPIKCSWGNKPT 346
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VT+ +L+ VF G + K+ ++ GFV + +R A ++ LNG
Sbjct: 66 SVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALSILTLNGK 125
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
Q+ GQ IR++W + ++ +N
Sbjct: 126 QIFGQLIRVNWAYASGQREDTTDHFN 151
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 268 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 151 MQTLNGRRIHQSE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSA-F 207
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P + + L
Sbjct: 268 ISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLV 327
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ + A A+ LNG + G+ ++ SWG+
Sbjct: 328 PLFQNFGFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 151/294 (51%), Gaps = 25/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG VS K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
SV A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 248 ------KAATGQQYQKATYQN---TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
AA G A + T G Q + P TT +VG L P T L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQTDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|432916416|ref|XP_004079326.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 345
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 15/192 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E + +R +Q
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P++ + F+LN+ATYG +R + GP+F++FVGDLA+++ D+ L + F+ Y
Sbjct: 68 RLNGKLVPASNPPRKFKLNYATYG---KRPEAGPEFSVFVGDLASEIDDFQLHQVFKK-Y 123
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---- 247
S KGAKVVTD+ G S+GYGFV+FG+ESEQ +++ E G + +P+R+ A K
Sbjct: 124 PSCKGAKVVTDQ-YGYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRLSIAVAKSQKV 182
Query: 248 ---KAATGQQYQ 256
+A GQ Y
Sbjct: 183 SNYQAGQGQSYH 194
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F A+ S G K++T R TG S GY FV DE R +
Sbjct: 8 SLWMGDLDPYMDENFIKQAFSAMGESPCGVKIITHRITGGSAGYCFVELADEESVDRCVQ 67
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG ++ PA+ Y ATY G + E P ++FVG L +
Sbjct: 68 RLNG--------KLVPASNPPRKFKLNY--ATY----GKRPEAGP-EFSVFVGDLASEID 112
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
D L VF +Y K+ + GFV+F + ++A+ GT LGG+ +RL
Sbjct: 113 DFQLHQVFKKYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQGTVLGGKPLRL 172
Query: 343 SWGRSPSNKQSDQAQWNGGGYY 364
S + S K S+ G Y+
Sbjct: 173 SIAVAKSQKVSNYQAGQGQSYH 194
>gi|126328777|ref|XP_001365071.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Monodelphis domestica]
Length = 287
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FV DL+ DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L + E + IF TG VS K+I +K S+GY GF+EF AAER
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +LQ+ F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F D ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ + A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 35/338 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L+IG++ P + + +A IF G VS K+I+++ NF G YGF+E+ +AE+ L
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDR--NFHHGGYNYGFVEYTDMRSAEQAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG ++ +E R+NWA G G R +D F +FVGDL+ +V D +L + F A ++
Sbjct: 73 TTLNGRKIFDSE--IRVNWAYQGQGNR-EDTQHHFHVFVGDLSPEVNDDILGKAF-AKFA 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A +K TG
Sbjct: 129 SLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVN-WANQKTQTG 187
Query: 253 QQYQKATYQNTQG------SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
Q G + NTT++VG L P T L +F YG +V +++
Sbjct: 188 GSRSLGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRM 247
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGF 366
A + FV+ A +++ L + G+ I+ SWG+ ++QSD
Sbjct: 248 QADRGFAFVKLDTHANAALSITSLQNQLVHGRPIKCSWGK---DRQSD------------ 292
Query: 367 AQGY---EAYGYAPPTQDPNMYYGGFPGYGTYQ-QPGS 400
A GY A+ P Q Y FPGYG QPG+
Sbjct: 293 APGYMVRHAFSERPDFQMYTNNYPYFPGYGGIPGQPGA 330
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFA 318
+Q P +++G + P VTD +L +F G +V KI G GFV++
Sbjct: 4 NQAAEAPKKPHLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYT 63
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSW 344
+ AEQAL+ LNG ++ IR++W
Sbjct: 64 DMRSAEQALTTLNGRKIFDSEIRVNW 89
>gi|395521932|ref|XP_003765068.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Sarcophilus
harrisii]
Length = 287
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 8/177 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + + F+LN+ATYG ++ D+ P++++FV DL+ DV D +L E F VY
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVY 120
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S +G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 121 PSCRGGKVVLDQ-AGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 149/294 (50%), Gaps = 25/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG +S K+I +K N S+G YGF+EF AAER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFN-SKGANYGFVEFDDPGAAERA 148
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 149 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 205
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++T M+G +R +R A K +
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 252 GQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDDILK 292
Q Q T G Q + TT +VG L P T + +
Sbjct: 266 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 325
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 326 PLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 379
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 148/294 (50%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG +S K+I +K S+G YGF+EF AAER
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++T M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDDILK 292
Q Q T G Q + TT +VG L P T + +
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMVVQQTPAWQTTCYVGNLTPYTTQNDIV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFQNFGYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGK 380
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 163/339 (48%), Gaps = 24/339 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + E I +FG G K+I E Y F+EF H +A L N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPG---HEPYCFVEFAEHHSAAAALAAMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
E ++NWAT +QD F IFVGDL+ ++ + L++ F A + +
Sbjct: 58 KRNCMGRE--MKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAF-AAFGEISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D T +SKGYGFV F +S+ ++ MNG TR +R A K A
Sbjct: 115 CRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGS 174
Query: 257 K-ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
K +Y+ G ++ N T++ G L T++ L+ +FG YG++ +++ K F+
Sbjct: 175 KPMSYEEVFG---QSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFI 231
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-DQAQWNGGGY--------YGF 366
+FA++ A QA+ ++ T L GQ+++ SWG+ P S + AQ GG YG+
Sbjct: 232 RFASKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTGGLGPTNTQYPYGY 291
Query: 367 AQGYEAY---GYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
QG + GY P Q + + G GY Y Q YQ
Sbjct: 292 NQGMSYWYPGGYPPQMQ--SQFVQGMQGYAAYGQFAGYQ 328
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G AP + +++GDL P +E + F GE +V+R+ QT S+GYGF+ F
Sbjct: 75 GNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSF 134
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------GAGER--------RQDDGPDFT 168
V + AE + NG + + + R NWAT AG + Q + T
Sbjct: 135 VKKSDAENAIAGMNGQWLGT--RAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCT 192
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM-- 226
++ G+LA T+ LQ+ F Y ++ +V D KGY F+RF + +++
Sbjct: 193 VYCGNLAQGSTEEALQKIF-GPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVS 245
Query: 227 ---TEMNG--VLCS--TRPMRIGPAATKKAATG 252
T++NG V CS P G A + TG
Sbjct: 246 VHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTG 278
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 9/297 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E++I +FG G S K+I N + Y F+EFV H+ A LQ
Sbjct: 14 RTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGN--DPYCFVEFVEHSHAAAALQ 71
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + E ++NWAT ++D +FVGDL+++V L+ F A +
Sbjct: 72 TMNGRMILGKE--VKVNWAT-TPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAF-APFGQ 127
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D T +SKGYGFV F ++ + ++ MNG S R +R AT+K +
Sbjct: 128 ISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTN-WATRKPPPPR 186
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
Q + + + NTT+++GG+ +T+ ++ F YG + V+I K
Sbjct: 187 QPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPDKGYA 246
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNG-GGYYGFAQG 369
F++F A A+ +NG+Q+ G ++ SWG+ S+ QAQ N GYY + QG
Sbjct: 247 FIRFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLY-QAQPNTYPGYYNYQQG 302
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
A + DD T++VG+L VT+ + + F + K K++ + G + Y FV
Sbjct: 3 ANQYFDDDALPRTLYVGNLDRQVTEAFILQLFGQI-GPCKSCKMIAEH--GGNDPYCFVE 59
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
F + S ++ MNG + + +++ + T S ++ N+
Sbjct: 60 FVEHSHAAAALQTMNGRMILGKEVKV-----------------NWATTPSSMKKDTSNHH 102
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSV 329
+FVG L V LK F +G++ ++ K GFV F N+ AE A+
Sbjct: 103 HVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQG 162
Query: 330 LNGTQLGGQSIRLSWG-RSP 348
+NG L G++IR +W R P
Sbjct: 163 MNGQWLSGRAIRTNWATRKP 182
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK-----RCGFVQFANRTCA 323
++D T++VG LD VT+ + +FGQ G K+ A C FV+F + A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYC-FVEFVEHSHA 66
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
AL +NG + G+ ++++W +PS+ + D
Sbjct: 67 AAALQTMNGRMILGKEVKVNWATTPSSMKKD 97
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 47 WTPQPVPPPSQ----QTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
W + PPP Q + Y ++SS +++IG + + E + F H G
Sbjct: 177 WATRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGGVTTGLTEGKMRETFSHYGHIQE 236
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
++ +K GY FI F++H +A + + NG+Q+
Sbjct: 237 VRIFPDK------GYAFIRFMTHESAAHAIVSVNGSQI 268
>gi|198421765|ref|XP_002125303.1| PREDICTED: similar to tRNA selenocysteine-associated protein 1
(SECp43) [Ciona intestinalis]
Length = 324
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
RSLW+GDL+P+M+E+++ F + VS KVIR K GY FIEF S A AERVL+
Sbjct: 3 RSLWMGDLEPYMDETFVNKAFLQVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NGT + + + FRLN + G + D GP F+IFVGDL A VTD L++ F Y
Sbjct: 63 LVNGTTINGSNPPKRFRLNRSQAG---KMWDIGPSFSIFVGDLDATVTDDKLEDFFLKRY 119
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
SVKGAK++ + G S+GYGFVRF DE+EQ R++ EM G+ +P+R+ A K
Sbjct: 120 RSVKGAKIMYEE-GGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAKPIRVSVATPK 175
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + + F V V KV+ + G GY F+ F E+E R +
Sbjct: 4 SLWMGDLEPYMDETFVNKAFLQVSQPV-SVKVIRRKDNGLPAGYCFIEFPSEAEAERVLK 62
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG S P R +Q + + + +IFVG LD +
Sbjct: 63 LVNGTTINGSNPPKRF-----------------RLNRSQAGKMWDIGPSFSIFVGDLDAT 105
Query: 286 VTDDILKTVF-GQYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQ 338
VTDD L+ F +Y + KI + GFV+F++ ++AL + G + LG +
Sbjct: 106 VTDDKLEDFFLKRYRSVKGAKIMYEEGGISRGYGFVRFSDEAEQKRALQEMQGIRGLGAK 165
Query: 339 SIRLS 343
IR+S
Sbjct: 166 PIRVS 170
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 25/313 (7%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 28 PPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSS 87
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
YGF+++ +A + T NG + Q ++NWA A +R+D + IFVG
Sbjct: 88 ----YGFVDYFDRRSAALAIVTLNGRHL--FGQPIKVNWAY--ASAQREDTSNHYNIFVG 139
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL+ +VTD L F +VY+S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 140 DLSPEVTDATLFACF-SVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGK 198
Query: 233 LCSTRPMRIGPAATKKAATGQQYQ--KATYQNTQGSQG------------ENDPNNTTIF 278
+R +R AA A G+Q K+ + T G+ EN+P TT++
Sbjct: 199 WLGSRQIRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVY 258
Query: 279 VGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
VG L P VT L F G V V+I K GFV++++ A +A+ + N L
Sbjct: 259 VGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLF 318
Query: 337 GQSIRLSWGRSPS 349
G+ ++ SWG P+
Sbjct: 319 GKPVKCSWGSKPT 331
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G L K+ + GFV + +R A A+ LNG
Sbjct: 50 SVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGR 109
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + + ++ +N
Sbjct: 110 HLFGQPIKVNWAYASAQREDTSNHYN 135
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S K+I +K N S+GY GF+EF AAER
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFN-SKGYNYGFVEFDDPGAAERA 149
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 150 MQTLNGRRIHQSE--IRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-F 206
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPS 266
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLV 326
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 PLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 166/321 (51%), Gaps = 26/321 (8%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
VG+ P+ V + + Y +A + S+ R+L++G+L P + + +IA++F G K
Sbjct: 12 VGYNPR-VHARVAEKEGYQLA--SGSEDPRTLFVGNLDPAVTDEFIATLFNQMGAVTKAK 68
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY----GAGERR 160
+I + Q ++ Y FIEF H A + LQ+ NG Q+ E R+NWA G R+
Sbjct: 69 IIFDFQ-GLADPYAFIEFSDHNQAAQALQSMNGRQLLDRE--LRVNWAVEPNQPGDSSRK 125
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D F +FVGDL++++ L+E F + V AK++ D TT ++KGYGFV +
Sbjct: 126 MDYSRHFHVFVGDLSSEIDSTKLKEAFLP-FGEVSEAKIIRDTTTNKAKGYGFVSYPRRE 184
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATK--------------KAATGQQYQKATYQNTQGS 266
+ R++ +MNG R +R A+ K G+++ +
Sbjct: 185 DAERAIEQMNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERFHGGFEKTYDEI 244
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQA 326
+ P+NT+++VG + S+T+D ++ F ++G + V+I + FV+F + A +A
Sbjct: 245 FHQTSPDNTSVYVGQIG-SLTEDEIRRAFDRFGAINEVRIFKLQGYAFVKFEQKEPAARA 303
Query: 327 LSVLNGTQLGGQSIRLSWGRS 347
+ +N T++ GQ +R SWG+S
Sbjct: 304 IVQMNNTEIMGQMVRCSWGKS 324
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 31/328 (9%)
Query: 42 PPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
PPP PP QQ +P + P + RS+++G++ + E+ + +F G
Sbjct: 28 PPPHHHLLGAAPP--QQIEPILTGNLPPGFDTSTCRSVYVGNIHVQVTEALLREVFQSAG 85
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
K+IR ++++ YGF+++ +A + T NG Q+ Q R+NWA Y +G+
Sbjct: 86 SVDGCKLIRKEKSS----YGFVDYYERGSAALAILTLNGKQIFG--QPIRVNWA-YASGQ 138
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
R +D F IFVGDL+ +VTD L F A + A+V+ D+ TGRS+GYGFV F +
Sbjct: 139 R-EDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRN 197
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ---------------QYQKATYQNT 263
+ + ++ ++NG R +R ATK A +G+ + + Q +
Sbjct: 198 QQDAQSAINDLNGQWLGNRQIRCN-WATKGANSGEDQLASDSKSIVDVNNNFTENAKQKS 256
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRT 321
EN+P T++VG L VT D+L F G + V++ GK GFV+++N
Sbjct: 257 NEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGKGFGFVKYSNHA 316
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPS 349
A+ NG LGG+ ++ SWG P+
Sbjct: 317 ETALAIQTGNGRILGGKPVKCSWGNKPT 344
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +L+E F++ SV G K++ + YGFV + + ++
Sbjct: 62 SVYVGNIHVQVTEALLREVFQSA-GSVDGCKLIRKEKSS----YGFVDYYERGSAALAIL 116
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+R+ A A+GQ+ E+ ++ IFVG L P VT
Sbjct: 117 TLNGKQIFGQPIRVNWAY----ASGQR--------------EDTTDHFHIFVGDLSPEVT 158
Query: 288 DDILKTVFGQYG-------ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D L F Y + K + GFV F N+ A+ A++ LNG LG + I
Sbjct: 159 DSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQI 218
Query: 341 RLSWGRSPSNKQSDQ 355
R +W +N DQ
Sbjct: 219 RCNWATKGANSGEDQ 233
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 144/295 (48%), Gaps = 25/295 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE---GYGFIEFVSHAAAER 130
R+L++G L P + E + IF TG VS K+I +K FS YGF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAER 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+ T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 141 AMTTLNGRRVHQAE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R+ A K
Sbjct: 198 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQP 257
Query: 251 TGQQYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDIL 291
+ Q Q TQG Q N TT +VG L P T L
Sbjct: 258 SISQQQAMAAMGMSPTTPFGHHHFPTQGIQSYEMVVNQTPAWQTTCYVGNLTPYTTQADL 317
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + + + F++ A A+ L+G + G+ ++ SWG+
Sbjct: 318 VPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 372
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC---------GFVQFANRT 321
+PN ++VGGLDP VT+D+LK +F G +V VKI K GFV++ +
Sbjct: 77 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPG 136
Query: 322 CAEQALSVLNGTQLGGQSIRLSW 344
AE+A++ LNG ++ IR++W
Sbjct: 137 AAERAMTTLNGRRVHQAEIRVNW 159
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 153/282 (54%), Gaps = 15/282 (5%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E IA++F G KVI + ++ Y F+EF+ H+ A
Sbjct: 40 SDEPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGA---NDPYAFVEFLDHSQAS 96
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F+
Sbjct: 97 QALQTMNKRLLLDRE--MKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQ 154
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 155 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 212
Query: 249 AATGQQYQKATYQNTQGSQ---GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
G Q +K T+ N + + +NT+++VG + ++++D ++ F YG + V+
Sbjct: 213 --PGDQ-EKPTHYNEKSFDEIYNQTSGDNTSVYVGNI-ANLSEDEIRQAFASYGRISEVR 268
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
I + FV+F N+ A +A+ +N ++GGQ +R SWG++
Sbjct: 269 IFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 310
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LDPSV++D++ T+F Q G + K+ A FV+F + + A QAL +N
Sbjct: 45 TLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDPYAFVEFLDHSQASQALQTMNK 104
Query: 333 TQLGGQSIRLSWGRSP 348
L + ++++W P
Sbjct: 105 RLLLDREMKVNWAVEP 120
>gi|260829407|ref|XP_002609653.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
gi|229295015|gb|EEN65663.1| hypothetical protein BRAFLDRAFT_123569 [Branchiostoma floridae]
Length = 297
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL+P+M+E +I + F GE +S K+I+N+QT G+ F++F AER
Sbjct: 1 MTSLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERA 60
Query: 132 LQTFNGTQMPS--TEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L +G Q+P T + F+LN+A+YG R P+++IFVGDL ++ D LQE F
Sbjct: 61 LTRLSGKQLPGSYTPKRFKLNYASYG---RENVVTPEYSIFVGDLTPEIDDGSLQEFFGR 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
YSS K AKVV D G S+GYGFVRF DE+EQ R++TEM G + + +R+ PA +
Sbjct: 118 RYSSCKAAKVVLD-AAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGKALRVSPATPR 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 26/185 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + + F ++ + K++ +R TG G+ FV FGD+ R++T
Sbjct: 3 SLWMGDLEPYMDEPFIMNAFASMGEPIISVKLIKNRQTGGPAGFCFVDFGDQQLAERALT 62
Query: 228 EMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++G + S P R + A+Y G + P +IFVG L P
Sbjct: 63 RLSGKQLPGSYTPKRF------------KLNYASY----GRENVVTPE-YSIFVGDLTPE 105
Query: 286 VTDDILKTVFG-QYGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQ-LGGQ 338
+ D L+ FG +Y K+ AG + GFV+F + ++AL+ + G LGG+
Sbjct: 106 IDDGSLQEFFGRRYSSCKAAKVVLDAAGNSRGYGFVRFTDENEQKRALTEMQGAVGLGGK 165
Query: 339 SIRLS 343
++R+S
Sbjct: 166 ALRVS 170
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 29/312 (9%)
Query: 54 PPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
PP QQ +P + P + RS+++G++ + E+ + +F TG K+IR ++
Sbjct: 39 PPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEK 98
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
++ YGF+++ +A + NG Q+ Q R+NWA Y +G+R +D F IF
Sbjct: 99 SS----YGFVDYYERGSAALAILQLNGRQIFG--QPIRVNWA-YASGQR-EDTTDHFNIF 150
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+A+VTD L F SS A+V+ D+ TGRS+GYGFV F ++ + ++ ++N
Sbjct: 151 VGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLN 210
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG---------------ENDPNNT 275
G R +R ATK A + + Q + ++ G EN+P
Sbjct: 211 GQWLGNRQIRCN-WATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANEDAPENNPLYR 269
Query: 276 TIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
T++VG L T D+L F G + V++ GK GFV++++ A A+ + NG
Sbjct: 270 TVYVGNLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSHAEAALAIQMGNGC 329
Query: 334 QLGGQSIRLSWG 345
LGG+ I+ SWG
Sbjct: 330 ILGGKPIKCSWG 341
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ VL+E F++ SV+G K++ + YGFV + + ++
Sbjct: 63 SVYVGNIHVHVTEAVLREVFQST-GSVEGCKLIRKEKSS----YGFVDYYERGSAALAIL 117
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+R+ A A+GQ+ E+ ++ IFVG L VT
Sbjct: 118 QLNGRQIFGQPIRVNWAY----ASGQR--------------EDTTDHFNIFVGDLSAEVT 159
Query: 288 DDILKTVFGQYGE-------LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D L F Y + K + GFV F N+ A+ A++ LNG LG + I
Sbjct: 160 DSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQI 219
Query: 341 RLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD 381
R +W +N DQ + G + G +D
Sbjct: 220 RCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANED 260
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 148/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGFIE+ AAER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGLNYGFIEYDDPGAAER 159
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 160 AMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAC 217
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
SV A+V+ D TGRS+GYGFV F D ++ ++++ M+G +R +R A K
Sbjct: 218 -GSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQP 276
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 277 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 337 IPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 169/352 (48%), Gaps = 41/352 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + + + IF TG VS K+I +K YGF+E+ AAER +Q
Sbjct: 78 RALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAK-GFNYGFVEYDDPGAAERAMQ 136
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA + ++D F IFVGDL+ +V D +LQ+ F + +
Sbjct: 137 TLNGRRVHQSE--IRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAF-TTFGT 193
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
+ A+V+ D TGRS+GYGFV + + S+ ++++ M+G +R +R A K + +
Sbjct: 194 ISEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQKGQPSIS 253
Query: 253 QQYQKA------------TYQNTQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
QQ Q A + T G Q + P TT++VG L P T + L +
Sbjct: 254 QQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLPL 313
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSNKQS 353
F +G +V + A + F++ A A+ L+G + G+ ++ SWG+ P Q
Sbjct: 314 FQNFGYIVETRFQADRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQF 373
Query: 354 DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQQPQ 405
D GY G Q PN + FP YG PG PQ
Sbjct: 374 D--------------GYSPQGGPQTPQFPNSPFSNFPQYGG---PGGPMSPQ 408
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 175/367 (47%), Gaps = 39/367 (10%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGI----------RSLWIGDLQPWMEESYI 90
+PPP+ P P+ + + S+ G+ R+L++G L P + E +
Sbjct: 26 MPPPLNIPQNTNPLPTSMNSAFEMGSPTSAGGLVRRAAPEPNKRALYVGGLDPRVTEDVL 85
Query: 91 ASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
IF TG + K+I +K NF S+G YGF+E+ AAER +QT NG ++ +Q
Sbjct: 86 KQIFETTGHVQNVKIIPDK--NFQSKGFNYGFVEYDDPGAAERAMQTLNGRRV--HQQEI 141
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
R+NWA ++D F IFVGDL+ +V D VL + F A + +V A+V+ D TGR
Sbjct: 142 RVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGTVSEARVMWDMKTGR 200
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----- 262
S+GYGFV F D ++ ++++ M+G +R +R A K + Q Q
Sbjct: 201 SRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTT 260
Query: 263 ---------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
TQG+Q + P TT +VG L P T + L +F +G + +
Sbjct: 261 PYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQ 320
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSNKQSDQAQWNGGGYYGF 366
+ + F++ A A+ L+G Q+ G+ ++ SWG+ P Q D G GF
Sbjct: 321 SDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPTGQFDGFSPAQGPPSGF 380
Query: 367 AQGYEAY 373
Q +A+
Sbjct: 381 PQSAQAF 387
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG + K+I +K + YGFIE+ AAER +Q
Sbjct: 86 RALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSK-GYNYGFIEYDDPGAAERAMQ 144
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F + + S
Sbjct: 145 TLNGRRIHQAE--IRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAF-STFGS 201
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------PAAT 246
V A+V+ D TGRS+GYGFV F D ++ ++++ M+G +R +R P+ +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 261
Query: 247 KKAATGQQYQKAT----YQN--TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
++AA T + N T G Q + P TT +VG L P T + L +
Sbjct: 262 QQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLVPL 321
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 322 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 373
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 145/294 (49%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGY--GFIEFVSHAAAERV 131
R+L++G L P + E + IF TG S KVI +K S+GY GF+EF AAER
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERA 151
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A +
Sbjct: 152 MQTLNGRRIHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSA-F 208
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F D + +++ M+G +R +R A K +
Sbjct: 209 GSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPS 268
Query: 252 GQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q T G Q + P TT +VG L P + L
Sbjct: 269 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLV 328
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 329 PLFQNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 382
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 153/296 (51%), Gaps = 29/296 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG + K+I +K NF S+GY GF+E+ AAER
Sbjct: 83 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 141 AMQTLNGRRV--HQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 197
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------P 243
+ +V A+V+ D TGRS+GYGFV + D E ++++ M+G +R +R P
Sbjct: 198 FGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 257
Query: 244 AATKKAATGQQ-------YQKATYQNTQGSQGENDPNN------TTIFVGGLDPSVTDDI 290
+ +++ A Q Y T+ TQGSQ N TT +VG L P T +
Sbjct: 258 SFSQQQAMAQMGMTPTTPYGHHTFP-TQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQND 316
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L +F +G + + + + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 317 LVPLFQNFGYVTETRFQSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGK 372
>gi|403359035|gb|EJY79175.1| Nuclear acid binding protein, putative [Oxytricha trifallax]
Length = 474
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+A G ++LWIGD++PWM+++YI+S+F + K+IR+K GYGF+EF +H
Sbjct: 9 EAGQVGAKTLWIGDVEPWMDDAYISSLFSGIASVQTVKLIRDKLKGTPVGYGFVEFPNHD 68
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ---------------DDGP------ 165
A V T NG+ +P T ++++LNWAT+G G +Q + P
Sbjct: 69 VARNVYLTLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQG 128
Query: 166 -----------DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
DF I+VGDL +V D +L F Y SV AKV+ D T SKGYGFV
Sbjct: 129 GPGGAQQQQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFV 188
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+FG + E +M EM G +PM+I A
Sbjct: 189 KFGSQEESQNAMVEMQGYYLFKKPMKINQA 218
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GD+ + D + F + +SV+ K++ D+ G GYGFV F +
Sbjct: 17 TLWIGDVEPWMDDAYISSLFSGI-ASVQTVKLIRDKLKGTPVGYGFVEFPNHDVARNVYL 75
Query: 228 EMNGVLC--STRPMRI-----GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTT--- 276
+NG + +T+ ++ G K+ Q Q Q + Q Q N
Sbjct: 76 TLNGSVIPGTTKSYKLNWATHGNGGIKQIQNQPQSQPPHLQMHNQNPQMMNQGGPGGAQQ 135
Query: 277 -------IFVGGLDPSVTDDILKTVFG-QYGELVHVKIPA------GKRCGFVQFANRTC 322
I+VG LDP+V D +L VF +Y + K+ K GFV+F ++
Sbjct: 136 QQQGDFQIYVGDLDPNVNDQMLLNVFNKKYPSVTQAKVIVDPVTRYSKGYGFVKFGSQEE 195
Query: 323 AEQALSVLNGTQLGGQSIRLS 343
++ A+ + G L + ++++
Sbjct: 196 SQNAMVEMQGYYLFKKPMKIN 216
>gi|318037555|ref|NP_001188239.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
gi|308324633|gb|ADO29451.1| tRNA selenocysteine 1-associated protein 1-like [Ictalurus
punctatus]
Length = 315
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL +V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTPEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK 247
Y S KGAKVVTD G SKGYGFV+FGDESEQ +++ E N + +RI A K
Sbjct: 122 KYPSCKGAKVVTD-PYGNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAIRISIAVNK 179
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 22/193 (11%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F + + G K++T R TG S GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAYGVKIITHRVTGGSAGYCFVELADEASVDRCVQ 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG ++ P + Y ATY G + E P ++FVG L P V
Sbjct: 67 RLNG--------KLVPGSNPPRKFKLNY--ATY----GKRPEPGPE-FSVFVGDLTPEVD 111
Query: 288 DDILKTVF-GQYGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVL-NGTQLGGQSI 340
D L F +Y K+ P G K GFV+F + + ++AL N T LGG++I
Sbjct: 112 DYQLHQFFLKKYPSCKGAKVVTDPYGNSKGYGFVKFGDESEQKKALEEFQNATGLGGKAI 171
Query: 341 RLSWGRSPSNKQS 353
R+S + SNK +
Sbjct: 172 RISIAVNKSNKSN 184
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + E + ++FG G K+I +E Y F+EF H++A L T N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETG---NEPYAFVEFSEHSSAALALGTMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
E ++NWAT + +QD IFVGDL+ D+ L+E F+ + ++
Sbjct: 58 KRTCFGRE--MKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKP-FGTISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
K++ D T +SKGYGFV + + E ++ MNG +R +R A K AA +
Sbjct: 115 CKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKET 174
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
A ++ P N T++ GG+ +T+D++++ FG++G++ +++ K F++
Sbjct: 175 NAQPLTFDEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIR 234
Query: 317 FANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ + A +A+ ++ T++GG +++ SWG+ + +D
Sbjct: 235 YNTKEAATEAIVKMHQTEVGGHTVKCSWGKESKDSPAD 272
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P +E + F G K+IR+ QT S+GYGF+ +V AE + +
Sbjct: 88 IFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSM 147
Query: 136 NGTQMPSTEQNFRLNWATYGAG---------------ERRQDDGP-DFTIFVGDLAADVT 179
NG + S + R NWA E + P + T++ G + + +T
Sbjct: 148 NGQWIGS--RAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGILSGLT 205
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +++ F + ++ +V D KGY F+R+ + ++ +M+
Sbjct: 206 EDLVRSAF-GEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMH 249
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 148/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGFIE+ AAER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGLNYGFIEYDDPGAAER 159
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 160 AMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 217
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 218 -GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 276
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 277 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 337 IPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 148/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGFIE+ AAER
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGLNYGFIEYDDPGAAER 159
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 160 AMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 217
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 218 -GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 276
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 277 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 336
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 337 IPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 391
>gi|326932968|ref|XP_003212582.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Meleagris gallopavo]
Length = 307
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 110/171 (64%), Gaps = 8/171 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 30 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 89
Query: 140 MP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + + F+LN+ATYG ++ D+ P++++FVGDL ADV D +L E F VY S +G
Sbjct: 90 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTADVDDGMLYEFFVKVYPSCRGG 146
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
KVV D+ G SKGYGFV+F DE EQ R++TE G + ++PMR+ A K
Sbjct: 147 KVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPMRLSVAIPK 196
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +Q
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMQ 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 379
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 158/327 (48%), Gaps = 37/327 (11%)
Query: 53 PPPSQQTQPYG-----VAPDASSDGIR---------SLWIGDLQPWMEESYIASIFGHTG 98
P P+ T P G ++PD++ +R +L++G L P + E + IF TG
Sbjct: 54 PIPTAVTSPMGENGGMMSPDSAGGFVRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTG 113
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ K+I +K + YGF+E+ AAAER +QT NG ++ E R+NWA
Sbjct: 114 HVQNVKIIPDKNSK-GFNYGFVEYDDPAAAERAMQTLNGRRVHQAE--IRVNWAYQSNTS 170
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F +
Sbjct: 171 NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRE 229
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
+ ++++ M+G +R +R A K + Q Q + T G
Sbjct: 230 RQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHG 289
Query: 266 SQG------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q + TT++VG L P T + L +F +G +V + A + FV+
Sbjct: 290 VQSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDT 349
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGR 346
A A+ L+G + G+ ++ SWG+
Sbjct: 350 HENAAMAICQLSGYNVNGRPLKCSWGK 376
>gi|229594706|ref|XP_001022345.3| RNA binding protein [Tetrahymena thermophila]
gi|225566688|gb|EAS02100.3| RNA binding protein [Tetrahymena thermophila SB210]
Length = 482
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 116/205 (56%), Gaps = 26/205 (12%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
S+ +R+LW+GD++ WM E +I S+F G+ VS K+IR K+T+ GY F+EF +H A
Sbjct: 2 SNLDLRTLWVGDIENWMTEQFIESVFNKVGKVVSVKLIRTKETSLPAGYCFVEFQTHEQA 61
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWAT-----------------------YGAGERRQDDGP 165
ER+L +N +P T+ FR+NW YG ++ P
Sbjct: 62 ERILMNYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMP 121
Query: 166 ---DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+F+I+VG+L + + L E FR+ YSSV G+K++T+ T+ SKGYGFV+F + E
Sbjct: 122 PIQEFSIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEG 181
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATK 247
R++ EMNG L + +++ A ++
Sbjct: 182 QRAIHEMNGSLFKGKFIKVSQAVSR 206
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T++VGD+ +T+ ++ F V V K++ + T GY FV F + R +
Sbjct: 8 TLWVGDIENWMTEQFIESVFNKV-GKVVSVKLIRTKETSLPAGYCFVEFQTHEQAERILM 66
Query: 228 EMNGVLC----STRPMRIGPAATKKAATGQQYQKAT--YQNTQGSQGENDP------NNT 275
N L +T M G T Q +A Y N Q +
Sbjct: 67 NYNQQLIPGTQNTFRMNWGKNPTNTGIIKQPTTQANNGYGNNQYGMMQQPVIQMPPIQEF 126
Query: 276 TIFVGGLDPSVTDDILKTVF-GQYGELVHVKI---PAGKRC---GFVQFANRTCAEQALS 328
+I+VG L+ + + L F +Y ++ KI P K GFV+F+N ++A+
Sbjct: 127 SIYVGELELGINEQQLAEHFRSKYSSVIGSKIITEPTSKMSKGYGFVKFSNPIEGQRAIH 186
Query: 329 VLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ-----------GYEAYGYAP 377
+NG+ G+ I++S S +Q QAQ G GF Q Y YGY P
Sbjct: 187 EMNGSLFKGKFIKVSQAVS---RQQQQAQAQAAGTPGFPQPAGYGAATGAADYNGYGYYP 243
Query: 378 --PTQDP 382
P+QDP
Sbjct: 244 QQPSQDP 250
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AAER
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPGAAER 138
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 139 AMQTLNGRRV--HQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 195
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------P 243
+ +V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R P
Sbjct: 196 FGNVSEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQP 255
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNN------------TTIFVGGLDPSVTDDIL 291
+ +++ A Q T S P + TT +VG L P T + L
Sbjct: 256 SFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDL 315
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G + + + + F++ + A A+ L+G Q+ G+ ++ SWG+
Sbjct: 316 VPLFQNFGYVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGK 370
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF TG + K+I +K S+G YGF+E+ AAER
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERA 148
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A +
Sbjct: 149 MQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCA-F 205
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
SV A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 206 GSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 265
Query: 252 GQQYQKAT-------------YQNTQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILK 292
Q Q + T G Q + P TT++VG L P T + L
Sbjct: 266 ISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLV 325
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
+F +G +V + + + FV+ A A+ L+G + G+ ++ SWG+ + Q
Sbjct: 326 PLFQNFGYVVETRFQSDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPSQ 385
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 150/281 (53%), Gaps = 13/281 (4%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L P + E ++A++F G KVI + ++ Y F+EF HA A
Sbjct: 38 SDEPRTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGA---NDPYAFVEFSDHAQAS 94
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + D F +FVGDL+++V + L+E F+
Sbjct: 95 QALQTMNKRLLLDRE--MKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 152
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 153 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK- 210
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + Y + N +NT+++VG + +++++ ++ F YG + V+I
Sbjct: 211 --PGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNI-ANLSEEDIRQAFASYGRISEVRI 267
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ FV+F N+ A +A+ +N ++GGQ +R SWG++
Sbjct: 268 FKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWGKT 308
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LDP+V++D + T+F Q G + K+ A FV+F++ A QAL +N
Sbjct: 43 TLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDPYAFVEFSDHAQASQALQTMNK 102
Query: 333 TQLGGQSIRLSWGRSP 348
L + ++++W P
Sbjct: 103 RLLLDREMKVNWAVEP 118
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 147/297 (49%), Gaps = 27/297 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF---SEG--YGFIEFVSHAAA 128
R+L++G L P + E + IF TG S K+I +K + S+G YGFIE+ AA
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER +QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 157 ERAMQTLNGRRVHQSE--IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFS 214
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 215 AC-GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKG 273
Query: 249 AATGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDD 289
+ Q Q T G Q + P TT +VG L P T +
Sbjct: 274 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQN 333
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L +F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 334 DLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 390
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDK--NFQSKGLNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 327 VPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|224081280|ref|XP_002188811.1| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Taeniopygia
guttata]
Length = 281
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 8/174 (4%)
Query: 78 IGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+G+L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 137 GTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
G +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S
Sbjct: 61 GKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 117
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+G KVV D+ G SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 118 RGGKVVLDQ-AGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 170
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+G+L + + + F + V K++ +R TG GY FV F D + + + ++N
Sbjct: 1 MGELEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 60
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
G +P+ P AT Y ATY G Q +N P ++FVG L P V D +
Sbjct: 61 G-----KPL---PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGM 105
Query: 291 LKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLS 343
L F + G++V + K GFV+F + ++AL+ G LG + +RLS
Sbjct: 106 LYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 165
Query: 344 WGRSPSNK 351
+N+
Sbjct: 166 VAIPKANR 173
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + Q S+GYGF++
Sbjct: 80 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVK 137
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 138 FTDELEQKRALTECQG 153
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 118/206 (57%), Gaps = 16/206 (7%)
Query: 51 PVP-PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
P+P PP+ +Q SS ++LW+GDL PW +E I ++ G+ V K+I+ K
Sbjct: 60 PIPNPPTATSQ-------TSSSPPKTLWMGDLDPWSDEDAIVHLWSTLGKRVLVKLIKAK 112
Query: 110 Q-------TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+ GY FIEF ++ A+ L + NG+Q+P+T + FRLNWA+
Sbjct: 113 KGTPAATLNTGHAGYCFIEFETYDDAKSAL-SLNGSQIPNTNRLFRLNWASGATLSSPIP 171
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
P+F++FVGDL+ T+ L F+ + SVK +V+TD TG S+ +GFVRF DE E+
Sbjct: 172 QSPEFSLFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEER 231
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKK 248
R++TEM GV C+ RP+R+ A +
Sbjct: 232 RRALTEMQGVWCAGRPLRVALATPRN 257
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DP NTT+F+GGL P + + L +F +G + HVKIP GK CGF++F R AE A++ +
Sbjct: 383 DPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKREDAEAAIAGM 442
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSDQ 355
G Q+GG +RLSWGR+ + +Q Q
Sbjct: 443 QGFQIGGSRVRLSWGRAQNQQQRVQ 467
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 165 PDFTIFVGDLA----ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS--KGYGFVRFGD 218
P T+++GDL D ++ + V + AK T T + GY F+ F +
Sbjct: 75 PPKTLWMGDLDPWSDEDAIVHLWSTLGKRVLVKLIKAKKGTPAATLNTGHAGYCFIEF-E 133
Query: 219 ESEQLRSMTEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTT 276
+ +S +NG + + R R+ A+G Q+ + S
Sbjct: 134 TYDDAKSALSLNGSQIPNTNRLFRL------NWASGATLSSPIPQSPEFS---------- 177
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHV------KIPAGKRC-GFVQFANRTCAEQALSV 329
+FVG L PS T+ L +F + + V I RC GFV+F++ +AL+
Sbjct: 178 LFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEERRRALTE 237
Query: 330 LNGTQLGGQSIRLSWGRSPSNKQSDQAQWNG--GGYYGFAQGYEAYGYAPP 378
+ G G+ +R++ +P N+ + Q N G G G + PP
Sbjct: 238 MQGVWCAGRPLRVALA-TPRNQSNQTNQTNSLIAGLNGLNLGPNGGQFIPP 287
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 24/294 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--YGFIEFVSHAAAERV 131
R+L++G L P + E + IF G VS K+I +K S+G YGF+E+ AER
Sbjct: 87 RALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERA 146
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+QT NG ++ +E R+NWA + ++D F IFVGDL+ +V D VL + F A +
Sbjct: 147 MQTLNGRRVHQSE--IRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-F 203
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 204 GQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 263
Query: 252 GQQYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILK 292
Q Q T G Q N TT +VG L P T L
Sbjct: 264 ISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLV 323
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 324 PLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 377
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 166/335 (49%), Gaps = 37/335 (11%)
Query: 35 QQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF 94
QQH + P V PQ P PS P G P RS++ G++ + E + IF
Sbjct: 29 QQHPSLYHPGVMAPPQMEPLPSGNLPP-GFDPTT----CRSVYAGNIHTQVTEILLQEIF 83
Query: 95 GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY 154
TG S K+IR +++ YGF+ + A + T NG + Q ++NWA Y
Sbjct: 84 ASTGPIESCKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-Y 136
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G+R +D F IFVGDL+ +VTD L ++F A ++S A+V+ D+ TGRS+G+GFV
Sbjct: 137 ATGQR-EDTSSHFNIFVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFV 194
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-- 268
F ++ + ++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 195 SFRNQQDAQTAINEMNGKWVSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSSEDG 253
Query: 269 ---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQF 317
EN+P TT++VG L P VT L +F G V V++ K GFV++
Sbjct: 254 RELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRY 313
Query: 318 ANRTCAEQALSVLNGTQ---LGGQSIRLSWGRSPS 349
T E AL++ G L + IR SWG P+
Sbjct: 314 --NTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPT 346
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++ G++ VT+ +LQE F A ++ K++ D+++ YGFV + D ++
Sbjct: 64 SVYAGNIHTQVTEILLQEIF-ASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAI 117
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +PM++ A ATGQ+ +++ N IFVG L P V
Sbjct: 118 MTLNGRHIFGQPMKVNWAY----ATGQREDTSSHFN--------------IFVGDLSPEV 159
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
TD L F + ++ ++ G FV F N+ A+ A++ +NG + + I
Sbjct: 160 TDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQI 219
Query: 341 RLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD 381
R +W + D+ +G G G +D
Sbjct: 220 RCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNED 260
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 174/365 (47%), Gaps = 44/365 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 149 AMQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 265
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN---------NTTIFVGGLDPSVTDDIL 291
AA G + + G N + TT +VG L P T + L
Sbjct: 266 SISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 325
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSN 350
+F +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+ P
Sbjct: 326 VPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPPT 385
Query: 351 KQSD--QAQWNGGGY--------YGFAQG-YEAYGYAPP----TQDPNMYYGGFPGYGTY 395
Q D QAQ G G+ YG G G AP Q N + G PG G Y
Sbjct: 386 GQFDGYQAQQGGPGFNASPYFPQYGVPGGPMSPQGPAPAGRGWDQQGNNFSGAVPGQG-Y 444
Query: 396 QQPGS 400
Q PG+
Sbjct: 445 QAPGN 449
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 149/281 (53%), Gaps = 13/281 (4%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L + E +IA++F G KVI + ++ Y F+EF H A
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGS---NDPYAFVEFSDHGQAS 98
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
+ LQT N + E ++NWA G + + D F +FVGDL+++V + L+E F+
Sbjct: 99 QALQTMNKRLLLDRE--MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 156
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 157 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + + Y + N +NT+++VG + S+T+D ++ F +G + V+I
Sbjct: 216 ---GDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 271
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ FV+F N+ A +A+ +N +GGQ +R SWG++
Sbjct: 272 FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 312
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LD +VT+D + T+F Q G + K+ + FV+F++ A QAL +N
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNK 106
Query: 333 TQLGGQSIRLSWGRSPSNKQS 353
L + ++++W P +QS
Sbjct: 107 RLLLDREMKVNWAVEPGQQQS 127
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDK--NFQSKGLNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRVHQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ SV A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQP 266
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q T G Q + P TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 327 VPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 381
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 165/414 (39%), Gaps = 122/414 (29%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR--- 107
P+PP S S + R+LW+GDL P +E I I+ V K+I+
Sbjct: 12 PLPPTS--------TIRTSVESPRTLWMGDLNPLFDELTITKIWKSLNLPVFVKLIKARK 63
Query: 108 -------------------------NKQTNFS-----------------------EGYGF 119
N + NF GY F
Sbjct: 64 NLLISSSSTKSQHSTSNNSPESGLSNNEDNFDLDIQRININGVNFIDPNTVQLHHAGYCF 123
Query: 120 IEFVSHAAAERVL------------QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
+EF S L ++ N P+ + FRLNWA+ + P++
Sbjct: 124 VEFESQQDVIAALSLNKAVIPNIFSESINLYTNPNGRRTFRLNWASGATLQSLIPATPEY 183
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++F+GDL+ T+ + F+ Y SVK +V+TD G S+G+GF+RF DE E+ ++
Sbjct: 184 SLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALE 243
Query: 228 EMNGVLCSTRPMRIGPAA--TKKAATGQQYQKA--------------------------- 258
MNGV+C +R R+ A T K AT +
Sbjct: 244 NMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTNIN 303
Query: 259 ----------------TYQNTQGSQGEN------DPNNTTIFVGGLDPSVTDDILKTVFG 296
T N+ +N D +NTT+F+GGL S + L+ +F
Sbjct: 304 ISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVLFE 363
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+G ++ VKIP GK CGFV+F + A A+ + G + G IRLSWG+S +N
Sbjct: 364 PFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGMQGFIINGNPIRLSWGKSNNN 417
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
D + T+F+G L+ +Y LQ F + ++ K+ K GFV+F + E
Sbjct: 338 DNSNTTVFIGGLSTSTNEYELQVLFEP-FGNILSVKIPI------GKNCGFVKFKRKIEA 390
Query: 223 LRSMTEMNGVLCSTRPMRIG-PAATKKAATGQQYQKATYQNTQGSQGE 269
++ M G + + P+R+ + A+T ++ NT S G+
Sbjct: 391 NAAIKGMQGFIINGNPIRLSWGKSNNNASTKLNHKHINIYNTSDSTGD 438
>gi|354548091|emb|CCE44827.1| hypothetical protein CPAR2_406300 [Candida parapsilosis]
Length = 445
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 18/288 (6%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+W+GDL P W EES S K++R++ Y F+ F A + LQ
Sbjct: 81 MWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQEALDWALQR 140
Query: 135 FNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
NG +PST++ F+L+ A+ G G R G +F++FVGDLA DV++ L F
Sbjct: 141 -NGQMVPSTQRRFKLSHASARNNNPNVGGGSGRPSTG-EFSLFVGDLAQDVSEAALYSKF 198
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K A+VV D+ + KG+GFV+F + R++ EM GV+ ++ +R+G AA
Sbjct: 199 NLKYPNEIKSARVVIDQNSKLGKGFGFVKFFHSATMERALKEMQGVMLGSKAIRVGIAAG 258
Query: 246 -----TKKAATGQQYQK-ATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
T A + +K A QN + D NT I + GL + T L+ VF +G
Sbjct: 259 SETTQTNHAQSKPDLKKLAVAQNQPELNADTDERNTNITISGLSSNFTARELELVFLSFG 318
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+L++ K+ + G+V+F +R AE A++ L+ T L + L+WG S
Sbjct: 319 DLIYCKLSRDLQKGYVKFVSRNAAELAMTQLSDTVLHNCRLELTWGSS 366
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 17/199 (8%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F +++GDL T+ + + + + K K++ DR Y FV FGD+ E L
Sbjct: 79 FQMWMGDLDPSWTEESIYTMWSTLVAPPKSLKIMRDRLNPSKPSYCFVTFGDQ-EALDWA 137
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+ NG + P+ ++ + N G G ++FVG L V
Sbjct: 138 LQRNGQMV--------PSTQRRFKLSHASARNNNPNVGGGSGRPSTGEFSLFVGDLAQDV 189
Query: 287 TDDILKTVFG-QY-GELVHVKI------PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
++ L + F +Y E+ ++ GK GFV+F + E+AL + G LG +
Sbjct: 190 SEAALYSKFNLKYPNEIKSARVVIDQNSKLGKGFGFVKFFHSATMERALKEMQGVMLGSK 249
Query: 339 SIRLSWGRSPSNKQSDQAQ 357
+IR+ Q++ AQ
Sbjct: 250 AIRVGIAAGSETTQTNHAQ 268
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 171/361 (47%), Gaps = 39/361 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 92 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 149
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 150 AMQTLNGRRIHQSE--IRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 206
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K
Sbjct: 207 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 266
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN---------NTTIFVGGLDPSVTDDIL 291
AA G + + G N + TT +VG L P T + L
Sbjct: 267 SISQQQAMAAMGMTPSAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 326
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSN 350
+F +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+ P
Sbjct: 327 VPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPPT 386
Query: 351 KQSD--QAQWNGGGY--------YGFAQG-YEAYGYAPPTQDPNMYYGGFPGYGTYQQPG 399
Q D QAQ G G+ YG G G AP + + F G YQ PG
Sbjct: 387 GQFDGYQAQQGGPGFNASPYFPQYGVPGGPMSPQGPAPAGRGWDQQGNNFSGGAGYQAPG 446
Query: 400 S 400
S
Sbjct: 447 S 447
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 170/336 (50%), Gaps = 28/336 (8%)
Query: 29 QSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEES 88
Q + +QQ P P P + P P P S RS+++G++ P + E
Sbjct: 3 QHHRLKQQAMMPYPHPALVAAPQIEPILSGNLP----PGFDSTTCRSVYVGNIHPQVTEP 58
Query: 89 YIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFR 148
+ +F +TG K+IR ++++ YGF+++ +A + T NG + Q +
Sbjct: 59 LLQEVFSNTGLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIK 112
Query: 149 LNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS 208
+NWA A +R+D F IFVGDL+ +VTD L +F A++ S A+V+ D+ TGRS
Sbjct: 113 VNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYASF-ALFPSCSDARVMWDQKTGRS 169
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT-------KKAATGQQYQKATYQ 261
+G+GFV F ++ + ++ E+NG +R +R AA K+++ + + T
Sbjct: 170 RGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELTNG 229
Query: 262 NTQGSQGEND------PNNTTIFVGGLDPSVTD-DILKTVFGQ-YGELVHVKIPAGKRCG 313
++ SQ +ND P TT++VG L P VT D+ + +G G + V++ K G
Sbjct: 230 TSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRVQRDKGFG 289
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
FV+++ A A+ + N L G+ ++ SWG P+
Sbjct: 290 FVRYSTHAEAALAIQMGNARILYGKPVKCSWGSKPT 325
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F ++G K++ + YGFV + D S+
Sbjct: 45 SVYVGNIHPQVTEPLLQEVFSNT-GLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 99
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 100 TLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 141
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ LNG +G + IR
Sbjct: 142 DATLYASFALFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIR 201
Query: 342 LSWG----RSPSNKQSDQAQ 357
+W S +KQS A+
Sbjct: 202 CNWAAKGTTSNDDKQSSDAK 221
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G + K+ ++ GFV + +R A ++ LNG
Sbjct: 45 SVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGR 104
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 105 HLFGQPIKVNWAYASSQREDTSGHFN 130
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 157/326 (48%), Gaps = 30/326 (9%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNQK 129
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
YGF+E+ AAER +QT NG ++ +E R+NWA + ++D F IFVG
Sbjct: 130 -GYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDTSGHFHIFVG 186
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D + ++++ M+G
Sbjct: 187 DLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGE 245
Query: 233 LCSTRPMRIGPAATKKAAT-------------------GQQYQKATYQNTQGSQGENDPN 273
+R +R A K + + + +
Sbjct: 246 WLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAW 305
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
TT +VG L P T + L +F +G +V + A + F++ A A+ LNG
Sbjct: 306 QTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAAMAICQLNGY 365
Query: 334 QLGGQSIRLSWG--RSPSNKQSDQAQ 357
Q+ G+ ++ SWG ++P+ +Q D Q
Sbjct: 366 QVNGRPLKCSWGKDKTPNPQQFDPNQ 391
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 171/354 (48%), Gaps = 33/354 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +Q
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDK-NHRGYNYGFVEYDDPGAAERAMQ 151
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 152 TLNGRRVHQNE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSA-FGS 208
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 209 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIH 268
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + L +
Sbjct: 269 QQQAMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQTPAWQTTCYVGNLTPYTTQNDLVPL 328
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQ 352
F +G +V ++ A + F++ + A A+ LNG + G+ ++ SWG R+P++ Q
Sbjct: 329 FQNFGYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKDRNPNHHQ 388
Query: 353 SDQAQWNGGGYYGFAQGYEAYGY-APPTQDPNMYYGGFPGYGTYQQPGSYQQPQ 405
Q++ Y QG +A GY P P YGG YG Q Y PQ
Sbjct: 389 ----QFDPNHQYS-PQGAQAPGYPGAPGAYPYNQYGG--AYGPPGQQSGYAGPQ 435
>gi|123904573|sp|Q4KM14.1|TSP1L_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1-like;
AltName: Full=tRNA selenocysteine 1-associated protein
1; AltName: Full=tRNA selenocysteine-associated protein
1
gi|68534021|gb|AAH98884.1| TRNA selenocysteine 1 associated protein 1 [Danio rerio]
Length = 316
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 10/185 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK- 247
+ S KGAKVVTD G S+GYGFV+F DE+EQ +++ E N +P+RI A K
Sbjct: 122 KFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKG 180
Query: 248 -KAAT 251
KA+T
Sbjct: 181 NKAST 185
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 50/240 (20%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F + + G K++T R TG S GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG L S P + + ATY G + E P ++FVG L
Sbjct: 67 RLNGKLVPGSNPPRKF------------KLNYATY----GKRPEPGPE-FSVFVGDLTSE 109
Query: 286 VTDDILKTVF-GQYGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVL-NGTQLGGQ 338
V D L F ++ K+ P G + GFV+F++ ++AL N + LGG+
Sbjct: 110 VDDYQLHQFFLKKFPSCKGAKVVTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGK 169
Query: 339 SIRLSWGRSPSNKQSDQA------------------------QWNGGGYYGFAQGYEAYG 374
IR+S + NK S QW Y G+ GY Y
Sbjct: 170 PIRISIAVNKGNKASTYHNQNNTYNTNYQQQYYRQPYNSYYPQWGYDQYSGYNYGYNPYA 229
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 145/274 (52%), Gaps = 15/274 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P++ E+ + IF G ++++++ T S G F++F H AA L+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALK 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + + E R+ WA E+ ++ IFVG+L+ DV D VL + F+ +
Sbjct: 65 TINGRILYNKE--VRIQWAF--QKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHL-GE 119
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
A+V+ D +TGRSKG+GFV F + +++ EM+G +R G A K +A TG
Sbjct: 120 CSDARVMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWAHHKTEAVTG 179
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ DP NT ++VG L V ++ L+ FG YGE+ +K
Sbjct: 180 LDID---------TVDRADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGY 230
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
GFV + + + A QA+ +NG +L G+ ++ SWGR
Sbjct: 231 GFVTYRDHSAAVQAIVGMNGKELKGKMVKCSWGR 264
>gi|157384980|ref|NP_001025137.2| tRNA selenocysteine 1-associated protein 1-like [Danio rerio]
Length = 316
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 10/185 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R
Sbjct: 5 MTSLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRC 64
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F
Sbjct: 65 VQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLK 121
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATK- 247
+ S KGAKVVTD G S+GYGFV+F DE+EQ +++ E N +P+RI A K
Sbjct: 122 KFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKG 180
Query: 248 -KAAT 251
KA+T
Sbjct: 181 NKAST 185
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 50/240 (20%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++GDL + + +++ F + + G K++T R TG S GY FV DE+ R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+NG L S P + + ATY G + E P ++FVG L
Sbjct: 67 RLNGKLVPGSNPPRKF------------KLNYATY----GKRPEPGPE-FSVFVGDLTSE 109
Query: 286 VTDDILKTVF-GQYGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVL-NGTQLGGQ 338
V D L F ++ K+ P G + GFV+F++ ++AL N + LGG+
Sbjct: 110 VDDYQLHQFFLKKFPSCKGAKVVTDPYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGK 169
Query: 339 SIRLSWGRSPSNKQS------------------------DQAQWNGGGYYGFAQGYEAYG 374
IR+S + NK S QW Y G+ GY Y
Sbjct: 170 PIRISIAVNKGNKASTYHNQNNTYNTNYQQQYYQQPYNSYYPQWGYDQYSGYNYGYNPYA 229
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 155/301 (51%), Gaps = 27/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + E +A +F G K+IR +++ YGF++++
Sbjct: 50 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDR 105
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA Y +G+R +D F IFVGDL+ +VTD L
Sbjct: 106 ASASLAIMTLHGRQVYG--QALKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLYA 161
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +V++S A+V+ D TGRSKGYGFV F ++ + ++ +++G R +R A
Sbjct: 162 CF-SVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCN-WA 219
Query: 246 TKKAATGQQYQKATYQN--------TQGSQG-------ENDPNNTTIFVGGLDPSVTDDI 290
TK A + Q QN + GSQ EN+P TT++VG L VT
Sbjct: 220 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 279
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G V V+I K GFV++ A A+ + NG + G+S++ SWG P
Sbjct: 280 LHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKP 339
Query: 349 S 349
+
Sbjct: 340 T 340
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + +VT+ +L VF G L K+ + GFV + +R A A+ L+G
Sbjct: 59 SVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAIMTLHGR 118
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
Q+ GQ+++++W + ++ +N
Sbjct: 119 QVYGQALKVNWAYASGQREDTSGHFN 144
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 155/301 (51%), Gaps = 27/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + E +A +F G K+IR +++ YGF++++
Sbjct: 11 PGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSS----YGFVDYLDR 66
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA Y +G+R +D F IFVGDL+ +VTD L
Sbjct: 67 ASASLAIMTLHGRQVYG--QALKVNWA-YASGQR-EDTSGHFNIFVGDLSPEVTDATLYA 122
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +V++S A+V+ D TGRSKGYGFV F ++ + ++ +++G R +R A
Sbjct: 123 CF-SVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCN-WA 180
Query: 246 TKKAATGQQYQKATYQN--------TQGSQG-------ENDPNNTTIFVGGLDPSVTDDI 290
TK A + Q QN + GSQ EN+P TT++VG L VT
Sbjct: 181 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 240
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G V V+I K GFV++ A A+ + NG + G+S++ SWG P
Sbjct: 241 LHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKP 300
Query: 349 S 349
+
Sbjct: 301 T 301
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + +VT+ +L VF G L K+ + GFV + +R A A+ L+G
Sbjct: 20 SVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAIMTLHGR 79
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
Q+ GQ+++++W + ++ +N
Sbjct: 80 QVYGQALKVNWAYASGQREDTSGHFN 105
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 164/359 (45%), Gaps = 45/359 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-----GYGFIEFVSHAAA 128
R+L++G L P + E + IF TG K+I +K + YGF+E+ AA
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAA 146
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER +QT NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 147 ERAMQTLNGRRVHQAE--IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFS 204
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A + SV A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K
Sbjct: 205 A-FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKG 263
Query: 249 AATGQQYQKATYQN-------------TQGSQG------ENDPNNTTIFVGGLDPSVTDD 289
+ Q Q+ + T G Q + TT +VG L P T +
Sbjct: 264 QPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQN 323
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
L +F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+ +
Sbjct: 324 DLIPLFQNFGFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 383
Query: 350 NKQSDQAQWNGGGYYGFAQGYEAYGYAPP-TQDPNMYYGG-----FPGYGTYQQPGSYQ 402
Q GF QG GY+P Q P Y G FP YG QP Q
Sbjct: 384 PTQD-----------GFPQGTPT-GYSPQGGQTPGGYGSGAQSAYFPQYGGMPQPAGPQ 430
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC-----------GFVQFAN 319
+PN ++VGGLDP VT+D+L+ +F G + HVKI K GFV++ +
Sbjct: 83 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDD 142
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQ 352
AE+A+ LNG ++ IR++W + SNK+
Sbjct: 143 PGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKE 177
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 144/280 (51%), Gaps = 18/280 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPG---NDPYAFVEFTNHQSASTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + +QD IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLF--LDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------PAAT 246
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P T
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
Query: 247 KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+KAA Q+ ++ T+ ++ P N T++ GG +T+D+++ F Q+G + +++
Sbjct: 182 EKAA--QRAKQPTFDEVYN---QSSPTNCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRV 236
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++FA + A A+ ++ T++ GQ ++ WG+
Sbjct: 237 FKDKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGK 276
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P P Q T + +++GDL P +E + F GE + +
Sbjct: 78 VNWATSPGNQPKQDTSNH-----------HHIFVGDLSPEIETETLREAFAPFGEISNCR 126
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GA 156
++R+ QT S+GY F+ FV A AE +Q NG + S ++ R NW+T A
Sbjct: 127 IVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGS--RSIRTNWSTRKPPPPKTEKA 184
Query: 157 GER----------RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+R Q + T++ G +T+ ++Q+TF V+ D
Sbjct: 185 AQRAKQPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQF-------GVIQDIRVF 237
Query: 207 RSKGYGFVRFGDESEQLRSM-----TEMNG 231
+ KGY F++F + ++ TE+NG
Sbjct: 238 KDKGYAFIKFATKESATHAIETIHNTEING 267
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 156/315 (49%), Gaps = 30/315 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEG--YGFIEFVSHAAAER 130
R+L+IG L + E + IF TG S K+I +K NF S+G YGF+E+ AAER
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIPDK--NFQSKGMNYGFVEYDDPGAAER 148
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 149 AMQTLNGRRIHQSE--IRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 205
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--- 247
+ SV A+V+ D TGRS+GYGFV F + + +++ M+ +R +R A K
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQP 265
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN---------NTTIFVGGLDPSVTDDIL 291
AA G + + G N + TT +VG L P T + L
Sbjct: 266 SISQQQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDL 325
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-PSN 350
+F +G +V ++ A + F++ A A+ LNG Q+ G+ ++ SWG+ P
Sbjct: 326 VPLFQNFGYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPPT 385
Query: 351 KQSD--QAQWNGGGY 363
Q D QAQ G G+
Sbjct: 386 GQFDGYQAQQGGPGF 400
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 169/396 (42%), Gaps = 105/396 (26%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-- 113
+Q +P SS+ R+LW+GDL P +E+ I ++ G V K+IR K+
Sbjct: 4 TQIPEPPSTTVQTSSEPPRTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIP 63
Query: 114 ---------------------------------SEGYGFIEFVSHAAAERVLQTFNGTQM 140
GY F++F + A+ LQ N T +
Sbjct: 64 CSTSSTLSASHVDEERIQINGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPL 122
Query: 141 PST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
P+ ++NFRLNWA+ + P+F++FVGDL+ T+ L F
Sbjct: 123 PNVVSPTTRNPTNPTGKRNFRLNWASGATLQSDIPATPEFSLFVGDLSPTATEAHLLSLF 182
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE----------------QLRSM--TEM 229
+ + SVK +V+TD TG S+ +GFVRF DE E QLR T
Sbjct: 183 QTKFKSVKTVRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPR 242
Query: 230 NGVLCS-------------------TRPMRIG------PAATKKAATGQQYQKATYQNTQ 264
N +L T P +G A AA+ + Q+
Sbjct: 243 NNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVPSLAQLDAASLGRAQQPLLLGAA 302
Query: 265 GSQ-GEN------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
GS G N D NTT+F+GGL +++ L +F +G ++ VK+P G+
Sbjct: 303 GSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRG 362
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
CGFV+F NR AE A+ + G +GG +IRLSWGR+
Sbjct: 363 CGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 194 VKGAKVVTDRTT-GRSKGYGFVRFGDESE-----QLRSMTEMNGVLCSTRPMRIGPAATK 247
+ G + TT GY FV+F + E QL + N V +TR
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQLNATPLPNVVSPTTR--------NP 133
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNT---TIFVGGLDPSVTDDILKTVF-GQYGELVH 303
TG++ + + + G+ ++D T ++FVG L P+ T+ L ++F ++ +
Sbjct: 134 TNPTGKRNFRLNWAS--GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKT 191
Query: 304 VK-----IPAGKRC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
V+ I RC GFV+FA+ +AL+ +NG G+ +R+++ +P N
Sbjct: 192 VRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 169/396 (42%), Gaps = 105/396 (26%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-- 113
+Q +P SS+ R+LW+GDL P +E+ I ++ G V K+IR K+
Sbjct: 4 TQIPEPPSTTVQTSSEPPRTLWMGDLDPSFDEATIQHVWLTVGHQVQVKLIRAKKNLLIP 63
Query: 114 ---------------------------------SEGYGFIEFVSHAAAERVLQTFNGTQM 140
GY F++F + A+ LQ N T +
Sbjct: 64 CSTSSTLSASHVDEERIQINGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQ-LNATPL 122
Query: 141 PST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
P+ ++NFRLNWA+ + P+F++FVGDL+ T+ L F
Sbjct: 123 PNVVSPTTRNPTNPTGKRNFRLNWASGATLQSDIPATPEFSLFVGDLSPTATEAHLLSLF 182
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE----------------QLRSM--TEM 229
+ + SVK +V+TD TG S+ +GFVRF DE E QLR T
Sbjct: 183 QTKFKSVKTVRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYATPR 242
Query: 230 NGVLCS-------------------TRPMRIG------PAATKKAATGQQYQKATYQNTQ 264
N +L T P +G A AA+ + Q+
Sbjct: 243 NNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVPSLAQLDAASLGRAQQPLLLGAA 302
Query: 265 GSQ-GEN------------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
GS G N D NTT+F+GGL +++ L +F +G ++ VK+P G+
Sbjct: 303 GSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRG 362
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
CGFV+F NR AE A+ + G +GG +IRLSWGR+
Sbjct: 363 CGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 194 VKGAKVVTDRTT-GRSKGYGFVRFGDESE-----QLRSMTEMNGVLCSTRPMRIGPAATK 247
+ G + TT GY FV+F + E QL + N V +TR
Sbjct: 82 INGVSFIDPNTTQLHHAGYCFVQFANLQEAQAGLQLNATPLPNVVSPTTR--------NP 133
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNT---TIFVGGLDPSVTDDILKTVF-GQYGELVH 303
TG++ + + + G+ ++D T ++FVG L P+ T+ L ++F ++ +
Sbjct: 134 TNPTGKRNFRLNWAS--GATLQSDIPATPEFSLFVGDLSPTATEAHLLSLFQTKFKSVKT 191
Query: 304 VK-----IPAGKRC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
V+ I RC GFV+FA+ +AL+ +NG G+ +R+++ +P N
Sbjct: 192 VRVMTDPITGASRCFGFVRFADEKERRRALAEMNGVWCQGRQLRVAYA-TPRNN 244
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 26/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 52 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 107
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F +FVGDL+ +VTD L
Sbjct: 108 ASAALAIMTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFA 163
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY++ A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 164 CF-SVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 222
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 223 KGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAE 282
Query: 291 LKTVFGQYGE--LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G L V++ +GK GFV++ A A+ + NG + G++++ SWG P
Sbjct: 283 LHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKP 342
Query: 349 S 349
+
Sbjct: 343 T 343
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VTD +L E F++ + G K++ + YGFV + D + ++
Sbjct: 61 SVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRASAALAIM 115
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y ++ ++T G + +FVG L P VT
Sbjct: 116 TLHGRQLYGQALKVNWA----------YANSSREDTSG--------HFNVFVGDLSPEVT 157
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ K GFV F + A+ A++ + G LG + IR
Sbjct: 158 DATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 217
Query: 342 LSWGRSPSNKQSDQAQWN 359
+W + S++ + N
Sbjct: 218 CNWATKGAGGSSNEEKIN 235
>gi|431891176|gb|ELK02053.1| tRNA selenocysteine 1-associated protein 1 [Pteropus alecto]
Length = 270
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 115/181 (63%), Gaps = 9/181 (4%)
Query: 74 RSLWI-GDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
RS ++ L+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+
Sbjct: 10 RSAFVFSQLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 69
Query: 132 LQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L NG +P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F
Sbjct: 70 LHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 126
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
VY S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 127 VYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 185
Query: 249 A 249
+
Sbjct: 186 S 186
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+ F + +V K++ +R TG GY FV F D + + + ++NG +P+
Sbjct: 27 ISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL--- 78
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY---- 298
P AT Y ATY G Q +N P ++FVG L P V D +L F +
Sbjct: 79 PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSC 131
Query: 299 --GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLS 343
G++V + K GFV+F + ++AL+ G LG + +RLS
Sbjct: 132 RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 179
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 94 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 151
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 152 FTDELEQKRALTECQG 167
>gi|344245053|gb|EGW01157.1| tRNA selenocysteine 1-associated protein 1 [Cricetulus griseus]
Length = 283
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 111/173 (64%), Gaps = 8/173 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 6 LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 65
Query: 140 MP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G
Sbjct: 66 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 122
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 123 KVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 174
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+ F + +V K++ +R TG GY FV F D + + + ++NG +P+
Sbjct: 15 ISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL--- 66
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY---- 298
P AT Y ATY G Q +N P ++FVG L P V D +L F +
Sbjct: 67 PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSC 119
Query: 299 --GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLS 343
G++V + K GFV+F + ++AL+ G LG + +RLS
Sbjct: 120 RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 167
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 82 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 139
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 140 FTDELEQKRALTECQG 155
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 26/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 26 PGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 81
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F +FVGDL+ +VTD L
Sbjct: 82 ASAALAIMTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNVFVGDLSPEVTDATLFA 137
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY++ A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 138 CF-SVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 196
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 197 KGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVTQAE 256
Query: 291 LKTVFGQYGE--LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G L V++ +GK GFV++ A A+ + NG + G++++ SWG P
Sbjct: 257 LHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRPVRGKTMKCSWGSKP 316
Query: 349 S 349
+
Sbjct: 317 T 317
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VTD +L E F++ + G K++ + YGFV + D + ++
Sbjct: 35 SVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRASAALAIM 89
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y ++ ++T G + +FVG L P VT
Sbjct: 90 TLHGRQLYGQALKVNWA----------YANSSREDTSG--------HFNVFVGDLSPEVT 131
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ K GFV F + A+ A++ + G LG + IR
Sbjct: 132 DATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 191
Query: 342 LSWGRSPSNKQSDQAQWN 359
+W + S++ + N
Sbjct: 192 CNWATKGAGGSSNEEKIN 209
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 148/295 (50%), Gaps = 27/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-SEGY--GFIEFVSHAAAER 130
R+L++G L P + E + IF TG S K+I +K NF S+GY GF+E+ AER
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK--NFQSKGYNYGFVEYDDPQCAER 139
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+QT NG ++ +Q R+NWA ++D F IFVGDL+ +V D VL + F A
Sbjct: 140 AMQTLNGRRV--HQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA- 196
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ +V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K
Sbjct: 197 FGTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQP 256
Query: 251 TGQQYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDIL 291
+ Q Q TQG+Q + P TT +VG L P T + L
Sbjct: 257 SYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDL 316
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F +G + + + + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 317 VPLFQNFGYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGK 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCA 323
+PN ++VGGLDP VT+D+LK +F G + VKI G GFV++ + CA
Sbjct: 78 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQSKGYNYGFVEYDDPQCA 137
Query: 324 EQALSVLNGTQLGGQSIRLSW 344
E+A+ LNG ++ Q IR++W
Sbjct: 138 ERAMQTLNGRRVHQQEIRVNW 158
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 165/338 (48%), Gaps = 39/338 (11%)
Query: 35 QQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIF 94
QQH + P V PQ P PS P G P RS++ G++ + E + IF
Sbjct: 29 QQHPSLYHPGVMAPPQMEPLPSGNLPP-GFDPTT----CRSVYAGNIHTQVTEILLQEIF 83
Query: 95 GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY 154
TG S K+IR +++ YGF+ + A + T NG + Q ++NWA Y
Sbjct: 84 ASTGPIESCKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-Y 136
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS---VKGAKVVTDRTTGRSKGY 211
G+R +D F IFVGDL+ +VTD L ++F A S + A+V+ D+ TGRS+G+
Sbjct: 137 ATGQR-EDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGF 195
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQ 267
GFV F ++ + ++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 196 GFVSFRNQQDAQTAINEMNGKWVSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSS 254
Query: 268 G-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGF 314
EN+P TT++VG L P VT L +F G V V++ K GF
Sbjct: 255 EDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGF 314
Query: 315 VQFANRTCAEQALSVLNGTQ---LGGQSIRLSWGRSPS 349
V++ T E AL++ G L + IR SWG P+
Sbjct: 315 VRY--NTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPT 350
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++ G++ VT+ +LQE F A ++ K++ D+++ YGFV + D ++
Sbjct: 64 SVYAGNIHTQVTEILLQEIF-ASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAI 117
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +PM++ A ATGQ+ E+ ++ IFVG L P V
Sbjct: 118 MTLNGRHIFGQPMKVNWAY----ATGQR--------------EDTSSHFNIFVGDLSPEV 159
Query: 287 TDDILKTVFGQYGELVHV----------KIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
TD L F + K + GFV F N+ A+ A++ +NG +
Sbjct: 160 TDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVS 219
Query: 337 GQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD 381
+ IR +W + D+ +G G G +D
Sbjct: 220 SRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNED 264
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 27/306 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AA+R +Q
Sbjct: 85 RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAADRAMQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG ++ +E R+NWA A ++D F IFVGDL+ +V D VL + F +V+
Sbjct: 144 TLNGRRVHQSE--IRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAF-SVFG 200
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
SV A+V+ D TGRS+GYGFV F D S+ ++++ M+G +R +R A K +
Sbjct: 201 SVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSI 260
Query: 253 QQYQKAT-------------YQNTQGSQGENDPNN------TTIFVGGLDPSVTDDILKT 293
Q Q + + T G Q N TT +VG L P T + +
Sbjct: 261 AQQQAMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVP 320
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+F +G +V + A + F++ + A QA+ LNG + G+ ++ SWG+ +K S
Sbjct: 321 LFQNFGYVVESRFQADRGFAFIKMDSHENAAQAICGLNGYNVNGRPLKCSWGK---DKNS 377
Query: 354 DQAQWN 359
Q N
Sbjct: 378 TNPQGN 383
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 166/343 (48%), Gaps = 32/343 (9%)
Query: 24 MAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQP 83
M YQ+ QQ Q P + PQ P S + P S RS+++G++ P
Sbjct: 1 MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGN-----LPPGFDSSTCRSVYVGNIHP 55
Query: 84 WMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST 143
+ E + +F G K+IR ++++ YGF+++ +A + + NG +
Sbjct: 56 QVTEPLLQEVFSSIGPIEGCKLIRKEKSS----YGFVDYFDRRSAAVSIISLNGRNL--F 109
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
Q ++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+
Sbjct: 110 GQPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQ 166
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KAT 259
TGRS+GYGFV F +E + ++ ++NG +R +R ATK A +G Q ++
Sbjct: 167 KTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCN-WATKGANSGDDKQSSDSRSV 225
Query: 260 YQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE--LVHVKI 306
+ T G+ EN+P TT++VG L P VT L F G + V++
Sbjct: 226 VELTSGTSDGGQEKSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRV 285
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
K GFV+++ A A+ N + G+ I+ SWG P+
Sbjct: 286 QRDKGFGFVRYSTNAEAALAIQTGNARVVCGKPIKCSWGSKPT 328
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F ++ ++G K++ + YGFV + D S+
Sbjct: 47 SVYVGNIHPQVTEPLLQEVFSSI-GPIEGCKLIRKEKSS----YGFVDYFDRRSAAVSII 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 102 SLNGRNLFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N A+ A++ +NG LG + IR
Sbjct: 144 DATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIR 203
Query: 342 LSWGRSPSNKQSDQ 355
+W +N D+
Sbjct: 204 CNWATKGANSGDDK 217
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G + K+ ++ GFV + +R A ++ LNG
Sbjct: 47 SVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGR 106
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 107 NLFGQPIKVNWAYASSQREDTSGHFN 132
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 163/327 (49%), Gaps = 33/327 (10%)
Query: 44 PVGWTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
P + P + PP + P G + P RS++ G++ + E + IF TG S
Sbjct: 28 PSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIES 87
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K+IR +++ YGF+ + A + T NG + Q ++NWA Y G+R +D
Sbjct: 88 CKLIRKDKSS----YGFVHYFDRRCASMAIMTLNGRHIFG--QPMKVNWA-YATGQR-ED 139
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
F IFVGDL+ +VTD L ++F A ++S A+V+ D+ TGRS+G+GFV F ++ +
Sbjct: 140 TSSHFNIFVGDLSPEVTDAALFDSFSA-FNSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 198
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG---------- 268
++ EMNG S+R +R ATK A G+ K+ + T GS
Sbjct: 199 QTAINEMNGKWLSSRQIRCN-WATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDA 257
Query: 269 -ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQ 325
EN+P TT++VG L P VT L +F G + V++ K GFV++ T E
Sbjct: 258 PENNPQYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRY--NTHDEA 315
Query: 326 ALSVLNGTQ---LGGQSIRLSWGRSPS 349
AL++ G L + I+ SWG P+
Sbjct: 316 ALAIQMGNAQPYLFSRQIKCSWGNKPT 342
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++ G++ VT+ +LQE F A ++ K++ D+++ YGFV + D ++
Sbjct: 60 SVYAGNIHTQVTEILLQEIF-ASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAI 113
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +PM++ A ATGQ+ +++ N IFVG L P V
Sbjct: 114 MTLNGRHIFGQPMKVNWAY----ATGQREDTSSHFN--------------IFVGDLSPEV 155
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
TD L F + ++ ++ G FV F N+ A+ A++ +NG L + I
Sbjct: 156 TDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQI 215
Query: 341 RLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD 381
R +W + D+ +G G G +D
Sbjct: 216 RCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNED 256
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 146/285 (51%), Gaps = 14/285 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L P + E + ++F + G + KVIR S+ Y F+EF +H+ A L
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPG---SDPYAFLEFDTHSGAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++NWAT + + D + IFVGDL+ ++ + L+E F A +
Sbjct: 65 AMNGRLF--LDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +SKGY FV F +S+ ++ MNG +R +R P +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Y+ T+ + ++ P N T++ GG+ +T+++++ VF ++G +V ++
Sbjct: 182 PNKYSGYRAVTFDDVYN---QSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFR 238
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
K F++F+ + A A+ ++ T++ G ++ WG+ + S
Sbjct: 239 DKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGKESGDPNS 283
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG----------AGER--------RQDDG 164
V + AE + + NG + S ++ R NW+T +G R Q
Sbjct: 145 VKKSDAENAINSMNGQWLGS--RSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSP 202
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++ G + +T+ ++++ F + +V R R KGY F++F +
Sbjct: 203 TNCTVYCGGIVEGLTEELVEQVFS------RFGTIVEIRAF-RDKGYAFIKFSTKEAATT 255
Query: 225 SM-----TEMNG--VLC 234
++ TE+NG V C
Sbjct: 256 AIEAVHNTEINGHPVKC 272
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQA 326
++ N T++VG LDPSVT+++L +F G + K+ P F++F + A A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSNK 351
L+ +NG + ++++W +P N+
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGNQ 87
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 24/340 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 183 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY--------- 363
FV+F++ A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 243 SFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ 302
Query: 364 -YGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
YG AQ Y PN + P YG Y QP S Q
Sbjct: 303 WYGNAQQIGQY-------VPNGWQ--VPAYGVYGQPWSQQ 333
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 162/352 (46%), Gaps = 34/352 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AA R +Q
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQK-GYNYGFVEYDDPGAAARAMQ 110
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 111 TLNGRRV----HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAF-AAFGS 165
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KAAT 251
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 166 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 225
Query: 252 GQQYQKATYQNTQGSQGEN----------------DPN-NTTIFVGGLDPSVTDDILKTV 294
QQ +A G + PN TT++VG L P T + + +
Sbjct: 226 QQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPL 285
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+ D
Sbjct: 286 FQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGK-------D 338
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGT--YQQPGSYQQP 404
+ GG+ QGY P P FP YG QPG+Y P
Sbjct: 339 KTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTAYFPQYGAQYSGQPGNYGGP 390
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 169/340 (49%), Gaps = 24/340 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 75 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 130
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 131 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 190
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 191 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 250
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY--------- 363
FV+F++ A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 251 SFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ 310
Query: 364 -YGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
YG AQ Y PN + P YG Y QP S Q
Sbjct: 311 WYGNAQQIGQY-------VPNGWQ--VPAYGVYGQPWSQQ 341
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 151/301 (50%), Gaps = 27/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + E +A +F G K+IR +++ YGF+++
Sbjct: 31 PGFDSSACRSVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKSS----YGFVDYHDR 86
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+ A + T +G Q+ Q ++NWA A +R+D F IFVGDL+ +VTD L
Sbjct: 87 SCAAVAIMTLHGRQLYG--QALKVNWAY--ANSQREDTSGHFHIFVGDLSPEVTDATLFA 142
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY+S A+V+ D TGRSKGYGFV F ++ E ++ +++G R +R A
Sbjct: 143 CF-SVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKWLGNRQIRCN-WA 200
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK +A+ + Q QN T GS EN+P TT++VG L VT
Sbjct: 201 TKGSASNEDKQIGDNQNAVILTSGSSEGGQENANEDAPENNPAYTTVYVGNLCHEVTQSE 260
Query: 291 LKTVFGQYGE--LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G + V++ K GFV++ A A+ + NG + G+ ++ SWG P
Sbjct: 261 LHCQFHTLGAGIIEEVRVQRDKGFGFVRYTTHEEAASAIQMANGKIVRGKPMKCSWGSKP 320
Query: 349 S 349
+
Sbjct: 321 T 321
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDES 220
D +++VG++ +VT+ +L E F+ + G K++ D+++ YGFV + D S
Sbjct: 34 DSSACRSVYVGNIHVNVTEKLLAEVFQTA-GPLAGCKLIRKDKSS-----YGFVDYHDRS 87
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++G + +++ A Y N SQ E+ + IFVG
Sbjct: 88 CAAVAIMTLHGRQLYGQALKVNWA---------------YAN---SQREDTSGHFHIFVG 129
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P VTD L F Y ++ K GFV F N+ A+ A++ L+G
Sbjct: 130 DLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQSAINDLSGKW 189
Query: 335 LGGQSIRLSWGRSPSNKQSDQ 355
LG + IR +W S D+
Sbjct: 190 LGNRQIRCNWATKGSASNEDK 210
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + +VT+ +L VF G L K+ + GFV + +R+CA A+ L+G
Sbjct: 40 SVYVGNIHVNVTEKLLAEVFQTAGPLAGCKLIRKDKSSYGFVDYHDRSCAAVAIMTLHGR 99
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
QL GQ+++++W + S ++ ++
Sbjct: 100 QLYGQALKVNWAYANSQREDTSGHFH 125
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 144/292 (49%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMA 158
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 159 TLNGRRVHQSE--IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 215
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 216 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 275
Query: 254 QYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 276 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPL 335
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 336 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 387
>gi|255724936|ref|XP_002547397.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135288|gb|EER34842.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 451
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 153/287 (53%), Gaps = 19/287 (6%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAERV 131
LW+GDL P E +I ++ + VS K++R+K Y F+ F + +
Sbjct: 84 LWMGDLDPNWTEDWITELWT---KLVSKPQHVKLMRDKLNPSRASYCFVTFKDQESVDLA 140
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP---DFTIFVGDLAADVTDYVLQETFR 188
+Q NG ++P +++ F+LN + + R+++ G DF++F+GDL +V+D L F
Sbjct: 141 IQR-NGQKVPDSDRFFKLNHSGKHSSGRQENHGAHIADFSMFIGDLVPEVSDATLFSKFN 199
Query: 189 AVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA-T 246
Y + +K AKV+ D T +SKG+GFV+F +++TEM G + ++ +R+G AA +
Sbjct: 200 TKYPNQIKQAKVIVDLNTKKSKGFGFVKFFTAEVMNKALTEMQGYIIGSKAIRVGLAAGS 259
Query: 247 KKAATGQQYQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
+T Q K Y +Q + DPNN ++ + GL +T+ LK F +G+
Sbjct: 260 TTDSTTQPITKFDYHKIHIAQQQPPLNQVTDPNNNSLTIRGLASQITEIELKQHFIAFGD 319
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
L++ ++ + G+V+F +R AE A L+G + +++SWG S
Sbjct: 320 LIYCQVSNDYQTGYVKFYSRAAAETAFMNLHGYIINDCRLQISWGSS 366
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 164/353 (46%), Gaps = 47/353 (13%)
Query: 41 VPPPVGWTPQPVPP-PSQQTQPYGVAPDASSDGI-------------------RSLWIGD 80
+PPP PQ P P+ T P G D S GI R+L++G
Sbjct: 39 MPPPPLHIPQNTNPIPTAITSPMGAGGDKS--GIMSPSSGGPFGRRAAPEPNKRALYVGG 96
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L P + E + IF TG S K+I +K YGF+E+ AAER +QT NG ++
Sbjct: 97 LDPRVTEDVLRQIFETTGHVQSVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQTLNGRRV 155
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
+E R+NWA ++D F IFVGDL+ +V D VL + F A + SV A+V+
Sbjct: 156 HQSE--IRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVM 212
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
D TGRS+GYGFV F + ++ ++++ M+G +R +R A K + Q Q
Sbjct: 213 WDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQ 272
Query: 261 QN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTVFGQYGEL 301
T G + N TT +VG L P T + + +F +G +
Sbjct: 273 MGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGFV 332
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQ 352
V + A + FV+ A A+ LNG + G+ ++ SWG ++P++ Q
Sbjct: 333 VESRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTPAHHQ 385
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 38/335 (11%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 113 F--SE-------GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
SE YGF+E+ AAER +QT NG ++ +E R+NWA + ++D
Sbjct: 130 KPGSEQPRQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQNKEDT 187
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D +
Sbjct: 188 SGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAE 246
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAAT-------------------GQQYQKATYQNTQ 264
++++ M+G +R +R A K + + +
Sbjct: 247 KALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYD 306
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAE 324
+ TT +VG L P T + L +F +G +V + A + F++ A
Sbjct: 307 MIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTHENAA 366
Query: 325 QALSVLNGTQLGGQSIRLSWG--RSPSNKQSDQAQ 357
A+ LNG Q+ G+ ++ SWG ++P+ +Q D Q
Sbjct: 367 MAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQ 401
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 15/337 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAVTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG ++ T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFA 367
K F++F + A A+ + T++ G +++ WG+ + +Q+ N
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAE-NQSGNNSSAAPPAM 300
Query: 368 QGYEAYGYAPPTQDPNMYYG-GFPGYGTYQQPGSYQQ 403
G Y Y P Q +Y G+P Y PG YQQ
Sbjct: 301 GGQSRYPY-PYQQGMGYWYAQGYPALQGYMAPGYYQQ 336
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 38/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRFTTKE 255
Query: 221 EQLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAAHAIGATHNTEISGHTVKC 276
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 144/281 (51%), Gaps = 15/281 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +FG G S K+I N + Y F+EF H A L
Sbjct: 114 RTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGN--DPYCFVEFYDHNHASAALT 171
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ + ++NWAT +G ++ D +FVGDL+ ++ L+ F A +
Sbjct: 172 AMNGRKI--MHKEVKVNWATTPSGNKK-DTSNHHHVFVGDLSPEIDTTDLKAAF-APFGK 227
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----KA 249
+ A+VV D T +S+GYGFV F ++ + ++ M+G R +R A K K+
Sbjct: 228 ISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKS 287
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
GQ+ Q S P NTT++ GG+ +T+D+++ F +G + +++
Sbjct: 288 NEGQKQLSYDEVLCQAS-----PTNTTVYCGGITKGLTEDLMRNTFSNFGPIQEIRVFPE 342
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K F++F + A A+ +NGTQ+ GQ+++ SWG+ S+
Sbjct: 343 KGYSFIRFFSHEVAAMAIVTVNGTQIEGQAVKCSWGKESSD 383
>gi|344302744|gb|EGW33018.1| hypothetical protein SPAPADRAFT_60343 [Spathaspora passalidarum
NRRL Y-27907]
Length = 457
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 157/292 (53%), Gaps = 23/292 (7%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
LW+GDL W EE+ I I+ E VS K+IR+K GY F+ F + + + +Q
Sbjct: 91 LWMGDLDSNWTEEA-IDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAMQ 149
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQ--------DDGPDFTIFVGDLAADVTDYVLQE 185
NG +PS+ + F+LN+A+ G Q D DF++FVGDL +V++ +L
Sbjct: 150 R-NGQPVPSSNKYFKLNYASGGGHGGGQSRHAASGGDSSNDFSMFVGDLGHEVSEALLFN 208
Query: 186 TFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F Y + +K KV+ D TT +SKG+GFVRF + R++ EMNGV ++ +R+G A
Sbjct: 209 KFNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLNGEALNRALQEMNGVEIGSKAIRVGLA 268
Query: 245 A-----TKKAATGQQ----YQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTV 294
+ +K T Q Y++ Q + D +NT++ + GL T+ L+
Sbjct: 269 SGASVDIQKGPTSSQGTVDYRRVVVPQPQPDLNQYTDYDNTSLVIKGLASKFTERELEMY 328
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G+L+H K+ + + G++++ R+ AE A+ ++G+ + + ++WG+
Sbjct: 329 FIGFGDLIHCKLSSDFQTGYIKYYLRSSAESAILYMHGSTINDCRLTINWGK 380
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F +++GDL ++ T+ + + ++ K++ D+ GY FV F ++ +M
Sbjct: 89 FQLWMGDLDSNWTEEAIDYIWASLVEKPVSVKIIRDKLNPTKPGYCFVTFNNQKSVDLAM 148
Query: 227 TEMNG--VLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+ NG V S + ++ A+ GQ A+ G + N+ ++FVG L
Sbjct: 149 -QRNGQPVPSSNKYFKLNYASGGGHGGGQSRHAAS--------GGDSSNDFSMFVGDLGH 199
Query: 285 SVTDDILKTVFGQY--GELVHVKI---PAGKRC---GFVQFANRTCAEQALSVLNGTQLG 336
V++ +L F ++ HVK+ P K+ GFV+F N +AL +NG ++G
Sbjct: 200 EVSEALLFNKFNHKYPNQIKHVKVIIDPTTKKSKGFGFVRFLNGEALNRALQEMNGVEIG 259
Query: 337 GQSIRL 342
++IR+
Sbjct: 260 SKAIRV 265
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 32/317 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P S P G P RS+++G++ P + ES + +F +G K+IR +++
Sbjct: 55 MEPISNGNLPPGFDPST----CRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKS 110
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+F GF+++ +A + T +G + Q ++NWA A +R+D F IFV
Sbjct: 111 SF----GFVDYYDRRSAALAIMTLHGRHICG--QAIKVNWAY--ASTQREDTSGHFHIFV 162
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 GDLSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG 221
Query: 232 VLCSTRPMRIGPAATKKAATGQQ---YQKATYQN-------TQGSQG-------ENDPNN 274
+R +R A A Q+ + N + SQ EN+P+
Sbjct: 222 KWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDC 281
Query: 275 TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
TT++VG L V D L F G + V++ K GFV+++N A A+ + NG
Sbjct: 282 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANG 341
Query: 333 TQLGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 342 LVVRGKPIKCSWGNKPT 358
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 68 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 127
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 128 MTLHGRHICGQAIKVNWAYASTQREDTSGHFH 159
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 193/428 (45%), Gaps = 55/428 (12%)
Query: 18 QQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPP-PSQQTQP--------------- 61
QQ+ + Q+ Q H +PPP PQ P P+ T P
Sbjct: 16 QQNTGGQGFDNQNGQSNSAH---MPPPPLHIPQNTNPIPTAITSPLGGGDQSGLMSPTSA 72
Query: 62 --YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGF 119
YG A R+L++G L + E + IF TG + K+I +K YGF
Sbjct: 73 AAYGGRRSAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGF 131
Query: 120 IEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVT 179
+E+ AAER +Q NG ++ +E R+NWA ++D F IFVGDL+ +V
Sbjct: 132 VEYDDPGAAERAMQNLNGRRVHQSE--IRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVN 189
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D VL + F + + SV A+V+ D TGRS+GYGFV F D + ++++ M+G +R +
Sbjct: 190 DEVLTQAFTS-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAI 248
Query: 240 RIGPAATKKAATGQQYQKATYQ--------------NTQGSQGENDPNN------TTIFV 279
R A +K Q+A Q TQG N TT +V
Sbjct: 249 RCN-WANQKGQPSMAQQQALQQVGMTPTTPFGHHHFPTQGINSYEMVINQTPAWQTTCYV 307
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
G L P T + L +F +G +V + + + F++ + A A+ LNG + G+
Sbjct: 308 GNLTPYTTQNDLVPLFQNFGYVVESRFQSDRGFAFIKLDSHENAAMAICQLNGYNVNGRP 367
Query: 340 IRLSWG--RSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPG-YGTYQ 396
++ SWG ++P+ + D +Q + YG Q +A G P + P Y+ + YG Q
Sbjct: 368 LKCSWGKDKTPNAQGFDPSQQS----YGSPQSAQAPGPYPGS--PTTYFPQYGAQYGNGQ 421
Query: 397 QPGSYQQP 404
Q G+Y P
Sbjct: 422 QSGNYGGP 429
>gi|403335112|gb|EJY66726.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 588
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 32/206 (15%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE-----GYGFIEFVSHA 126
G ++LWIGD++ WM+E Y+ ++F + ++ K+I+NK + GYGF+EF SH
Sbjct: 97 GSKTLWIGDIENWMDEQYVINLFQGIAQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSHE 156
Query: 127 AAERVLQTFNGTQMPST-EQNFRLNWATYGA-----------------------GERRQD 162
A+ + T NG +PS +NF+LNWA++ G R+Q+
Sbjct: 157 IAKSIFTTLNGASIPSLPNKNFKLNWASHQVAYNKTSYQNYQNNGHAQNYSNHQGSRKQE 216
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ + I+VGDL +V D +L TF+ Y SV AKV+ D T +SK YGFV+FG E
Sbjct: 217 E---YQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKFGIIEEG 273
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKK 248
+M EM G L T+ M+I A+ KK
Sbjct: 274 QNAMAEMQGKLLLTKAMKINHASQKK 299
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 51/262 (19%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-----GYGFVRFGDESEQ 222
T+++GD+ + + + F+ + + V K++ ++ ++ GYGFV F
Sbjct: 100 TLWIGDIENWMDEQYVINLFQGI-AQVMNIKLIKNKDNRKNSSAPQFGYGFVEFTSHEIA 158
Query: 223 LRSMTEMNGVLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGS---------QGEN 270
T +NG + P ++ A+ + A Y K +YQN Q + QG
Sbjct: 159 KSIFTTLNGASIPSLPNKNFKLNWASHQVA-----YNKTSYQNYQNNGHAQNYSNHQGSR 213
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKIPAGKRC-GFVQFANRTCA 323
I+VG LDP+V D +L F + +++ I +C GFV+F
Sbjct: 214 KQEEYQIYVGDLDPNVNDQMLMITFQKRYPSVNQAKVIMDPITRQSKCYGFVKFGIIEEG 273
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYY-GFAQGYEAYGYAPPTQDP 382
+ A++ + G L ++++++ + Q + +G G++ G Q + + Y P Q P
Sbjct: 274 QNAMAEMQGKLLLTKAMKIN--------HASQKKQDGFGFHQGAPQMQKNFQYQNPQQLP 325
Query: 383 NMYYGGFPGYGTYQQPGSYQQP 404
YQQP Q P
Sbjct: 326 ------------YQQPFGQQNP 335
>gi|449273177|gb|EMC82785.1| tRNA selenocysteine 1-associated protein 1, partial [Columba livia]
Length = 278
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P+M+E++++ F GE V S K+IRN+ T GY F+EF A AE+ L NG
Sbjct: 1 LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 60
Query: 140 MP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G
Sbjct: 61 LPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 117
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
KVV D+ G S+GYGFV+F DE EQ R++TE G + ++P+R+ A K
Sbjct: 118 KVVLDQ-AGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 167
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+ F + V K++ +R TG GY FV F D + + + ++NG +P+
Sbjct: 10 VSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL--- 61
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY---- 298
P AT Y ATY G Q +N P ++FVG L P V D +L F +
Sbjct: 62 PGATPAKRFKLNY--ATY----GKQPDNSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSC 114
Query: 299 --GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLSWGRSPSNK 351
G++V + + GFV+F + ++AL+ G LG + +RLS +N+
Sbjct: 115 RGGKVVLDQAGVSRGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKANR 170
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + Q S GYGF++
Sbjct: 77 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGVSRGYGFVK 134
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 135 FTDELEQKRALTECQG 150
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 32/339 (9%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + Q + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQQAMMQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNI--FGQPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNT 263
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q ++ + T
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQTSDSRSVVELT 229
Query: 264 QGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
GS E +P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDK 289
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
GFV+++ A A+ + N L G+ I+ SWG P+
Sbjct: 290 GFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VTD +L+ +F G L K+ ++ GFV + +R+ A A+ LNG
Sbjct: 47 SVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGR 106
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
+ GQ I+++W + S ++ +N
Sbjct: 107 NIFGQPIKVNWAYASSQREDTSGHFN 132
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 42/339 (12%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI------ 106
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 107 -------RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER 159
R+++ YGF+E+ AAER +QT NG ++ +E R+NWA +
Sbjct: 130 KPGSEQPRDEKQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQN 187
Query: 160 RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D
Sbjct: 188 KEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDR 246
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT-------------------GQQYQKATY 260
+ ++++ M+G +R +R A K + +
Sbjct: 247 PDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGV 306
Query: 261 QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ + TT +VG L P T + L +F +G +V + A + F++
Sbjct: 307 HSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDTH 366
Query: 321 TCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQSDQAQ 357
A A+ LNG Q+ G+ ++ SWG ++P+ +Q D Q
Sbjct: 367 ENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQ 405
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 97/129 (75%), Gaps = 10/129 (7%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
TIFVGGLDP+VT+D+LK VF YGE+VHVKIP GKRCGFVQ+ NR AEQAL+VL GT +
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLI 182
Query: 336 GGQSIRLSWGRSPSNK--QSDQAQW-----NGGGYYGFAQGYEAY-GYAPPTQDPNMY-Y 386
GGQ++RLSWGRS SNK Q D QW GG Y G+ QGYEAY GYA P QDPNMY Y
Sbjct: 183 GGQNVRLSWGRSLSNKQPQHDSNQWGAGAGAGGYYSGYGQGYEAYGGYAQP-QDPNMYGY 241
Query: 387 GGFPGYGTY 395
G + GY Y
Sbjct: 242 GAYAGYPNY 250
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
P +G +PV P T P S G ++++G L P + E + +F GE V
Sbjct: 93 PDLGHCHEPVDLPDPDTAPEISCCPTYSAG--TIFVGGLDPNVTEDVLKQVFAPYGEVVH 150
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K+ K+ GF+++V+ +AE+ L GT + QN RL+W + ++ Q
Sbjct: 151 VKIPVGKRC------GFVQYVNRPSAEQALAVLQGTLIGG--QNVRLSWGRSLSNKQPQH 202
Query: 163 D 163
D
Sbjct: 203 D 203
>gi|238883643|gb|EEQ47281.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 452
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 158/288 (54%), Gaps = 21/288 (7%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I +++ + VS K++R++ Y F+ F + +
Sbjct: 85 MWMGDLDPQWTEES-IDNLWT---KLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDL 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 141 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKF 199
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K AKV+TD +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 200 NMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAG 259
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+ K T + + +Q + + DPNNT+ +GGL +T+ L+ F +G
Sbjct: 260 SHVDTSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFG 319
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+LV+ ++ + G+++F +R+ AE A + G + ++++WG S
Sbjct: 320 DLVYCRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWGSS 367
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 43/340 (12%)
Query: 55 PSQQTQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK--- 109
P+ P+G AP+ + R+L++G L P + E + IF TG + K+I +K
Sbjct: 73 PTSAGNPFGRRAAPEPNK---RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVG 129
Query: 110 -----------QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
Q YGF+E+ AAER +QT NG ++ +E R+NWA +
Sbjct: 130 KPGSPEQPHDAQQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNNQ 187
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F D
Sbjct: 188 NKEDTSGHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRD 246
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT-------------------GQQYQKAT 259
+ ++++ M+G +R +R A K + +
Sbjct: 247 RPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHG 306
Query: 260 YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
+ + TT +VG L P T + L +F +G +V + A + F++
Sbjct: 307 VHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQADRGFAFIKMDT 366
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQSDQAQ 357
A A+ LNG Q+ G+ ++ SWG ++P+ +Q D Q
Sbjct: 367 HENAAMAICQLNGYQVNGRPLKCSWGKDKTPNPQQFDPNQ 406
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 163/331 (49%), Gaps = 30/331 (9%)
Query: 42 PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFV 101
P + PQ P PS P DA+S RS+++G++ + E+ +A +F + G
Sbjct: 29 PGLLATIPQMEPLPSGNLPP---GFDATS--CRSVYVGNIHTKVTEALLAEVFSNIGPLE 83
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
K+IR ++++ YGF++++ H A L T NG + Q ++NWA Y +G+R
Sbjct: 84 GCKLIRKEKSS----YGFVDYLDHIYAAVALTTLNGRLIFG--QPIKVNWA-YASGQRED 136
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
G + +FVGDL+ +VTD L F VY S A+V+ D+ +GRS+G+GFV F + E
Sbjct: 137 TTG-HYNVFVGDLSPEVTDATLFAAF-CVYPSCSDARVMWDQRSGRSRGFGFVSFRSQQE 194
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAA-TKKAATGQQYQKATY----------QNTQGSQG-- 268
+++EM G TR +R A T +A+ + + +GS G
Sbjct: 195 AENAISEMTGKWLGTRSIRCNWATKTNSSASADETNNGGHAVGMNDSKSEDRPEGSAGDG 254
Query: 269 -ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQ 325
EN+P TT++VG L V L F G V V++ K GFV++ A
Sbjct: 255 PENNPQYTTVYVGNLAHEVNQGELHRWFHCMGAGVIEDVRVQKDKGFGFVRYRTHEEAAL 314
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
A+ NG L G+S++ SWG P+ S A
Sbjct: 315 AIQAANGRVLCGKSVKCSWGSKPTVPGSSSA 345
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +L E F + ++G K++ + YGFV + D ++T
Sbjct: 57 SVYVGNIHTKVTEALLAEVFSNI-GPLEGCKLIRKEKSS----YGFVDYLDHIYAAVALT 111
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG L +P+++ A A+GQ+ E+ + +FVG L P VT
Sbjct: 112 TLNGRLIFGQPIKVNWAY----ASGQR--------------EDTTGHYNVFVGDLSPEVT 153
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ +R G FV F ++ AE A+S + G LG +SIR
Sbjct: 154 DATLFAAFCVYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAENAISEMTGKWLGTRSIR 213
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGF 366
+W ++ S NGG G
Sbjct: 214 CNWATKTNSSASADETNNGGHAVGM 238
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 142/284 (50%), Gaps = 17/284 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G K+IR ++ Y F+EFV+H AA L
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPN---NDPYAFVEFVNHQAASTALI 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E+ ++NWAT + +QD IFVGDL+ ++ + L+E F A +
Sbjct: 67 AMNKRHV--LEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAF-APFGE 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-------PAAT 246
+ ++V D T +SKGY FV F ++E ++ MNG R +R P T
Sbjct: 124 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRT 183
Query: 247 KKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+++ G + +Y+ ++ P N T++ GG + +D+++ F ++G + ++
Sbjct: 184 ERSRQGNA-KAVSYEEVYN---QSSPTNCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRS 239
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K F++F+ + A A+ ++ ++ GQ ++ WG+ S+
Sbjct: 240 FKDKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKCFWGKESSD 283
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 87 GNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 146
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-------------------QDD 163
V A AE + NG + ++ R NW+T R Q
Sbjct: 147 VKKAEAESAIHAMNGQWL--GNRSIRTNWSTRKPPPPRTERSRQGNAKAVSYEEVYNQSS 204
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
+ T++ G + + ++++ F + D + + KGY F+RF +
Sbjct: 205 PTNCTVYCGGFTNGINEDLIEKAFSRF-------GTIQDIRSFKDKGYAFIRFSTKEAAT 257
Query: 224 RSMTEMN 230
++ M+
Sbjct: 258 HAIEAMH 264
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 24/308 (7%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---Y 117
P G+ A + L++G+L P + E + IF G K+I ++ N+ G Y
Sbjct: 3 PMGMGGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNY 60
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+E++ AAE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+ +
Sbjct: 61 GFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPE 117
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R
Sbjct: 118 VNDEVLGKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 176
Query: 238 PMRIGPAATK-----------KAATGQQYQKATYQ----NTQGSQGENDPNNTTIFVGGL 282
+R+ A K +A G +Q + + P NTT++VG L
Sbjct: 177 AIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYEQVLAQTAPYNTTVYVGNL 236
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
P T L +F G L +++ A + FV+ A QA+ L G + G+ I+
Sbjct: 237 VPYTTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKC 296
Query: 343 SWGRSPSN 350
SWG+ ++
Sbjct: 297 SWGKDRAD 304
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 10/277 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR S+ Y FIE+ SH +A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS---SDPYAFIEYASHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG P +++D+++KT FGQ+G + V++
Sbjct: 182 NTKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD 241
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F ++ A +A+ + +++ G ++ WG+
Sbjct: 242 KGYAFIKFISKEAAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------------------GAGERRQDDG 164
V A AE +Q NG + S ++ R NW+T G E + G
Sbjct: 145 VKKAEAENAIQMMNGQWLGS--RSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTG 202
Query: 165 P-DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
P + T++ G + L +T + S+ +V D KGY F++F +
Sbjct: 203 PTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFISKEAAA 256
Query: 224 RSM 226
R++
Sbjct: 257 RAI 259
>gi|68485797|ref|XP_713179.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
gi|68485890|ref|XP_713133.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434612|gb|EAK94016.1| hypothetical protein CaO19.1876 [Candida albicans SC5314]
gi|46434659|gb|EAK94062.1| hypothetical protein CaO19.9432 [Candida albicans SC5314]
Length = 452
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 157/286 (54%), Gaps = 21/286 (7%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I +++ + VS K++R++ Y F+ F + +
Sbjct: 85 MWMGDLDPQWTEES-IDNLWT---KLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDL 140
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 141 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPEVSDAALYNKF 199
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
Y + +K AKV+TD +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 200 NMKYPNQIKQAKVITDSSTRKSKGFGFVKFHSPDIMNRALKEMQGYNIGSKAIRVGLAAG 259
Query: 246 -----TKKAATGQQYQKATYQNTQGSQGE-NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+ K T + + +Q + + DPNNT+ +GGL +T+ L+ F +G
Sbjct: 260 SHVDTSFKPVTKLDHHRVPVPQSQPALNQFTDPNNTSFTIGGLSGRITESELEQHFIGFG 319
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
+LV+ ++ + G+++F +R+ AE A + G + ++++WG
Sbjct: 320 DLVYCRVSKDYQTGYIKFYSRSAAESAFLNMYGFMINDCRLQITWG 365
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 173/374 (46%), Gaps = 48/374 (12%)
Query: 53 PPPSQQTQPYG-----VAPDASSDGIR---------SLWIGDLQPWMEESYIASIFGHTG 98
P P+ T P G ++PD++ +R +L++G L P + E + IF TG
Sbjct: 54 PIPTAITSPMGENGGVMSPDSAGGFVRRAAPEPNKRALYVGGLDPRVTEEVLRQIFETTG 113
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
+ K+I +K + YGF+E+ AAER +QT NG ++ E R+NWA
Sbjct: 114 HVQNVKIIPDKNSK-GFNYGFVEYDDPGAAERAMQTLNGRRVHQAE--IRVNWAYQSNTS 170
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGF F +
Sbjct: 171 NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFAAFRE 229
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
+ ++++ M+G +R +R A K + Q Q + T G
Sbjct: 230 RQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHG 289
Query: 266 SQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q + P TT +VG L P T L +F +G +V + A + FV+ +
Sbjct: 290 VQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQADRGFAFVKMDS 349
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQSD--------QAQWNGGGYYGFAQG 369
A A+ L+G + G+ ++ SWG ++P++ D QA GG+ G
Sbjct: 350 HENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAGFDGSQQSYSPQAGPTPGGFPGTPNA 409
Query: 370 Y-EAYGYAPPTQDP 382
Y YG PP P
Sbjct: 410 YFPQYGGMPPQAGP 423
>gi|443710130|gb|ELU04461.1| hypothetical protein CAPTEDRAFT_181109 [Capitella teleta]
Length = 297
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P+M+E++I++ F GE VS KVI+NK T GY F+EF A R +
Sbjct: 8 TLWMGDLEPYMDEAFISNAFHTMGEGVVSVKVIKNKHTGMPTGYCFVEFPDQEGAHRAML 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+ NG +P + + F+LN A++G R + P+F++FVGDL DV D +L F Y
Sbjct: 68 SLNGKIVPGSMPYKRFKLNHASFG---REHLNVPEFSLFVGDLTEDVDDLILYSHFHTHY 124
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAA 250
+++GAKVV D G+S+GYGFVRF E +Q +++ EM +P+R+ A KK
Sbjct: 125 KNLRGAKVVVDE-NGKSRGYGFVRFTCEKDQQKALVEMQHYTGIGRKPIRVSLATPKKTQ 183
Query: 251 TG 252
G
Sbjct: 184 AG 185
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 165/350 (47%), Gaps = 27/350 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAVTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG ++ T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-------------D 354
K F++F + A A+ + T++ G +++ WG+ ++ D
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPD 301
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG-GFPGYGTYQQPGSYQQ 403
Q+ N G Y Y P Q +Y G+P Y PG YQQ
Sbjct: 302 QSGNNSSAAPPAMGGQSRYPY-PYQQGMGYWYAQGYPALQGYMAPGYYQQ 350
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 38/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRFTTKE 255
Query: 221 EQLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAAHAIGATHNTEISGHTVKC 276
>gi|196008869|ref|XP_002114300.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
gi|190583319|gb|EDV23390.1| hypothetical protein TRIADDRAFT_57967 [Trichoplax adhaerens]
Length = 344
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 107/172 (62%), Gaps = 8/172 (4%)
Query: 81 LQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+ +M+E++I + F G V S K+IRN+ GY F++F +AE L+ NG
Sbjct: 46 LETYMDETFIRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGLP 105
Query: 140 MPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P + ++ F+LNWAT+GA R P+F+IFVGDL DVTD VL+ F + S KGA
Sbjct: 106 LPGSNPQKRFKLNWATHGA---RDAGNPEFSIFVGDLTPDVTDLVLRNFFCERFPSCKGA 162
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
KVV D+ G S+GYGFVRFGDE+E R++ EM G C RP+R+ A KK
Sbjct: 163 KVVIDQ-GGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVSLATPKK 213
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
++ F +V +V K++ +R G GY FV F D + ++NG+ P+
Sbjct: 55 IRNAFASVGRTVLSVKLIRNRVVGGPAGYCFVDFPDPQSAEDCLKQVNGL-----PL--- 106
Query: 243 PAATKKAATGQQYQKATYQN--TQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY-- 298
G QK N T G++ +P +IFVG L P VTD +L+ F +
Sbjct: 107 --------PGSNPQKRFKLNWATHGARDAGNPE-FSIFVGDLTPDVTDLVLRNFFCERFP 157
Query: 299 ---GELVHVKIPAGKR-CGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLS 343
G V + R GFV+F + +AL+ + G GG+ IR+S
Sbjct: 158 SCKGAKVVIDQGGNSRGYGFVRFGDENEHTRALNEMQGASGCGGRPIRVS 207
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMA 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 328 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 379
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 175/368 (47%), Gaps = 50/368 (13%)
Query: 60 QPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
P G++ A + L++G+L P + E + IF G K+I ++ N+ G
Sbjct: 2 NPMGMSGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLN 59
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E++ AAE LQT NG ++ TE R+NWA Y + ++D F +FVGDL+
Sbjct: 60 YGFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHFHVFVGDLSP 116
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 117 EVNDDVLAKAF-AAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGS 175
Query: 237 RPMRI---------------GPAA--TKKAATGQ----QYQKATYQNTQGSQGENDPNNT 275
R +R+ GP A T+ A G +Q Q + NT
Sbjct: 176 RAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSYESVVQ-QTPAFNT 234
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
T++VG L P T L +F G L +++ A + FV+ A A+ L G +
Sbjct: 235 TVYVGNLVPYCTQSDLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLV 294
Query: 336 GGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTY 395
G+ I+ SWG+ D+A GG G A A G AP YG P YG
Sbjct: 295 HGRPIKCSWGK-------DRAD---GGAAGTAPMSPATGAAP--------YGNMPMYGM- 335
Query: 396 QQPGSYQQ 403
QP +Y Q
Sbjct: 336 PQPNTYGQ 343
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 152/310 (49%), Gaps = 29/310 (9%)
Query: 59 TQPYG--VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
T P+G AP+ + R+L++G L + E + IF TG + K+I +K
Sbjct: 73 TSPFGRRTAPEPNK---RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFN 128
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD-FTIFVGDLA 175
YGF+E+ AA+R +QT NG ++ +E R+NWA A ++D + F IFVGDL+
Sbjct: 129 YGFVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQSANTTTKEDTSNHFHIFVGDLS 186
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCS 235
+V D VL + F +V+ SV A+V+ D TGRS+GYGFV F D + ++++ M+G
Sbjct: 187 NEVNDEVLTQAF-SVFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLG 245
Query: 236 TRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQGENDPNN------TT 276
+R +R A K + Q Q T G Q N TT
Sbjct: 246 SRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTT 305
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLG 336
+VG L P T + L +F +G +V + + + F++ A A+ LNG +
Sbjct: 306 CYVGNLTPYTTANDLVPLFQNFGYVVESRFQSDRGFAFIKMDTHENATSAICNLNGYNVN 365
Query: 337 GQSIRLSWGR 346
G+ ++ SWG+
Sbjct: 366 GRPLKCSWGK 375
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMS 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + + FV+ A A+ L+G + G+ ++ SWGR
Sbjct: 328 FQNFGYVVETRFQTDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGR 379
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 26/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 103
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 104 ASAALAIMTLHGRQL--YGQALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 160 CF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 218
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 219 KGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAE 278
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G V V++ K GF+++ A A+ + NG + G++++ SWG P
Sbjct: 279 LHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKP 338
Query: 349 S 349
+
Sbjct: 339 T 339
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VTD +L E F++ + G K++ + YGFV + D + ++
Sbjct: 57 SVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRASAALAIM 111
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y ++ ++T G + IFVG L P VT
Sbjct: 112 TLHGRQLYGQALKVNWA----------YANSSREDTTG--------HFNIFVGDLSPEVT 153
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ K GFV F + A+ A++ + G LG + IR
Sbjct: 154 DATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 213
Query: 342 LSWGRSPSNKQSDQAQWN 359
+W + S++ + N
Sbjct: 214 CNWATKGAGGSSNEEKNN 231
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K YGF+E+ AAER +Q
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 148
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 149 TLNGRRVHQSE--IRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSA-FGS 205
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 206 ISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 265
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + +
Sbjct: 266 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIVPL 325
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 326 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 377
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 26/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 48 PGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDR 103
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 104 ASAALAIMTLHGRQLYG--QALKVNWAY--ANSSREDTTGHFNIFVGDLSPEVTDATLFA 159
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R A
Sbjct: 160 CF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWAT 218
Query: 246 TKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
+ + + QN T GS EN+P+ TT++VG L VT
Sbjct: 219 KGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTVYVGNLPHDVTQAE 278
Query: 291 LKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
L F G V V++ K GF+++ A A+ + NG + G++++ SWG P
Sbjct: 279 LHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLVRGKNMKCSWGSKP 338
Query: 349 S 349
+
Sbjct: 339 T 339
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VTD +L E F++ + G K++ + YGFV + D + ++
Sbjct: 57 SVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRASAALAIM 111
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y ++ ++T G + IFVG L P VT
Sbjct: 112 TLHGRQLYGQALKVNWA----------YANSSREDTTG--------HFNIFVGDLSPEVT 153
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ K GFV F + A+ A++ + G LG + IR
Sbjct: 154 DATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 213
Query: 342 LSWGRSPSNKQSDQAQWN 359
+W + S++ + N
Sbjct: 214 CNWATKGAGGSSNEEKNN 231
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 167/374 (44%), Gaps = 45/374 (12%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 144
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 145 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 201
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K A
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 261
Query: 251 TGQQYQKATYQNTQGSQGENDPNN----------------TTIFVGGLDPSVTDDILKTV 294
Q Q T P + TT +VG L P T + + +
Sbjct: 262 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 321
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-------- 346
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+
Sbjct: 322 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTPNPQS 381
Query: 347 ---SPSNKQSDQAQWNGGGYYGFAQGY----------EAYGYAPPTQDPNMYYGGFP-GY 392
PS + +G GY G Y + +A PT YG P GY
Sbjct: 382 AGFDPSQQAYSPQSASGPGYPGTPTAYFPQYGGQYGGQHGNFAGPTAQSPAGYGAQPMGY 441
Query: 393 GTYQQPGSYQQPQQ 406
G Q G Y + QQ
Sbjct: 442 GGPQSAGGYGRGQQ 455
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 74 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 131
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 132 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 175
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALS 328
IFVG L V D++L F +G + ++ + G FV F +R AE+ALS
Sbjct: 176 FHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALS 235
Query: 329 VLNGTQLGGQSIRLSW 344
++G LG ++IR +W
Sbjct: 236 SMDGEWLGSRAIRCNW 251
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 26/303 (8%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
V P + RS+++G++ + + +A +F G K+IR ++++ YGF+++
Sbjct: 45 VPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYH 100
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
A+A + T +G Q+ Q ++NWA A R+D F IFVGDL+ +VTD L
Sbjct: 101 DRASAALAIMTLHGRQLYG--QALKVNWAY--ANSSREDTSGHFNIFVGDLSPEVTDATL 156
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F +VY S A+V+ D TGRSKGYGFV F D + ++ +M G R +R
Sbjct: 157 FACF-SVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNW 215
Query: 244 AATKKAATGQQYQKATYQN----TQGSQG-----------ENDPNNTTIFVGGLDPSVTD 288
A + + + QN T GS +N+P+ TT++VG L VT
Sbjct: 216 ATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTVYVGNLPHDVTQ 275
Query: 289 DILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L F G V V++ K GFV++ A A+ + NG + G++++ SWG
Sbjct: 276 AELHCQFHALGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMANGRLVRGKNMKCSWGS 335
Query: 347 SPS 349
P+
Sbjct: 336 KPT 338
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VTD +L E F++ + G K++ + YGFV + D + ++
Sbjct: 56 SVYVGNIHVNVTDKLLAEVFQSA-GPLAGCKLIRKEKSS----YGFVDYHDRASAALAIM 110
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y ++ ++T G + IFVG L P VT
Sbjct: 111 TLHGRQLYGQALKVNWA----------YANSSREDTSG--------HFNIFVGDLSPEVT 152
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ K GFV F + A+ A++ + G LG + IR
Sbjct: 153 DATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIR 212
Query: 342 LSWGRSPSNKQSDQAQWN 359
+W + S++ + N
Sbjct: 213 CNWATKGAGGSSNEEKIN 230
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 162/322 (50%), Gaps = 29/322 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGFI + AA + + NG + Q ++NWA Y +G+R G
Sbjct: 85 IRKEKSS----YGFIHYFDRRAAALAILSLNGRHL--FGQPIKVNWA-YASGQREDTSG- 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R A+K A + + Q K+ + T G+ EN
Sbjct: 196 INDLTGKWLGSRQIRCN-WASKGAGSNEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPEN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT +L F G V V++ K GFV+F+ A A+
Sbjct: 255 NPQYTTVYVGNLSPEVTQPVLHRHFHVLGAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQ 314
Query: 329 VLNG-TQLGGQSIRLSWGRSPS 349
+ N + L G+ I+ SWG P+
Sbjct: 315 MGNAQSLLCGKQIKCSWGSKPT 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+G K++ + YGF+ + D ++
Sbjct: 54 SVYVGNIHTQVTEPLLQEVF-ASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAALAIL 108
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 109 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 150
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 151 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 210
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 211 CNWASKGAGSNEDK 224
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAI 107
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 108 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 139
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 152/317 (47%), Gaps = 32/317 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P S P G P RS+++G++ P + ES + +F G K+IR +++
Sbjct: 30 MEPISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS 85
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+F GF+++ +A + T +G + Q ++NWA A +R+D F IFV
Sbjct: 86 SF----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFV 137
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 138 GDLSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG 196
Query: 232 VLCSTRPMRIG----------PAATKKAATGQQYQKATYQNTQGSQG-------ENDPNN 274
+R +R P A +T T SQ EN+P+
Sbjct: 197 KWLGSRQIRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDC 256
Query: 275 TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
TT++VG L V D L F G + +++ K GFV+++ A A+ + NG
Sbjct: 257 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANG 316
Query: 333 TQLGGQSIRLSWGRSPS 349
+ G+SI+ SWG P+
Sbjct: 317 LVVRGKSIKCSWGNKPT 333
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VT+ +L E F++ V+ K++ + +GFV + D ++
Sbjct: 49 SVYVGNVNPNVTESLLIEVFQSA-GLVERCKLIRKEKSS----FGFVDYYDRRSAALAIM 103
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y +TQ E+ + IFVG L V
Sbjct: 104 TLHGRHIYGQAIKVNWA---------------YASTQR---EDTSGHFHIFVGDLSSEVN 145
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ + G FV F N+ AE A++ + G LG + IR
Sbjct: 146 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 205
Query: 342 LSWGRSPSNKQ 352
+W ++++
Sbjct: 206 CNWATKTNSEE 216
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG ++P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 43 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 102
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 103 MTLHGRHIYGQAIKVNWAYASTQREDTSGHFH 134
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 152/315 (48%), Gaps = 32/315 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F +G K+IR ++++F
Sbjct: 61 PVSNGNLPPGFDPST----CRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSF 116
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + + +G + Q ++NWA A +R+D F IFVGD
Sbjct: 117 ----GFVDYYDRRSAALAIMSLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 168
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F +VY+S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 169 LSSEVNDATLYACF-SVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 227
Query: 234 CSTRPMRIGPAATKKAATGQQ---YQKATYQNTQGSQG--------------ENDPNNTT 276
+R +R A A Q+ + N S EN+P+ TT
Sbjct: 228 LGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTT 287
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
++VG L V D L F G + V++ K GFV++ A A+ + NG
Sbjct: 288 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLV 347
Query: 335 LGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 348 IRGKPIKCSWGNKPT 362
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 72 DPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFGFVDYYDRRSAALAI 131
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 132 MSLHGRHIYGQAIKVNWAYASTQREDTSGHFH 163
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T P G A R+L++G L + E + IF TG + K+I +K YG
Sbjct: 53 TSPGGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFNYG 111
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+E+ AA+R +QT NG ++ +E R+NWA ++D F IFVGDL+ +V
Sbjct: 112 FVEYDDPGAADRAMQTLNGRRVHQSE--IRVNWAYQANSSGKEDTSGHFHIFVGDLSNEV 169
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D +L + F A + SV A+V+ D TGRS+GYGFV F D E ++++ M+G +R
Sbjct: 170 NDDILTQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRA 228
Query: 239 MRIGPAATKKAATGQQYQKAT------------YQNTQGSQGEND------PN-NTTIFV 279
+R A K + Q Q +Q G D PN TT++V
Sbjct: 229 IRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYV 288
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
G L P T + + +F +G +V + A + F++ A A+ +NG + G+
Sbjct: 289 GNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRP 348
Query: 340 IRLSWGRSPSNKQ 352
++ SWG+ + Q
Sbjct: 349 LKCSWGKDKTPNQ 361
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 152/317 (47%), Gaps = 32/317 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P S P G P RS+++G++ P + ES + +F G K+IR +++
Sbjct: 55 MEPISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKS 110
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+F GF+++ +A + T +G + Q ++NWA A +R+D F IFV
Sbjct: 111 SF----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFV 162
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 GDLSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG 221
Query: 232 VLCSTRPMRIG----------PAATKKAATGQQYQKATYQNTQGSQG-------ENDPNN 274
+R +R P A +T T SQ EN+P+
Sbjct: 222 KWLGSRQIRCNWATKTNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDC 281
Query: 275 TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
TT++VG L V D L F G + +++ K GFV+++ A A+ + NG
Sbjct: 282 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANG 341
Query: 333 TQLGGQSIRLSWGRSPS 349
+ G+SI+ SWG P+
Sbjct: 342 LVVRGKSIKCSWGNKPT 358
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ +VT+ +L E F++ V+ K++ + +GFV + D ++
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQSA-GLVERCKLIRKEKSS----FGFVDYYDRRSAALAIM 128
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y +TQ E+ + IFVG L V
Sbjct: 129 TLHGRHIYGQAIKVNWA---------------YASTQR---EDTSGHFHIFVGDLSSEVN 170
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ + G FV F N+ AE A++ + G LG + IR
Sbjct: 171 DATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 230
Query: 342 LSWGRSPSNKQ 352
+W ++++
Sbjct: 231 CNWATKTNSEE 241
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG ++P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 68 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 127
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 128 MTLHGRHIYGQAIKVNWAYASTQREDTSGHFH 159
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 147/287 (51%), Gaps = 16/287 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+L++G+L + E I +F G S K+I + N + Y F+EF H A
Sbjct: 4 DLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAA 61
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTD 180
L NG ++ E ++NWAT + +++ + F +FVGDL+ ++T
Sbjct: 62 SLAAMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITT 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 120 DDIKAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIR 178
Query: 241 IGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A Y+ T Q T + ++ P+N T++ GG+ +T+ +++ F +G
Sbjct: 179 TNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ V++ K FV+F++ A A+ +NGT + G ++ WG+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 147/287 (51%), Gaps = 16/287 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D R+L++G+L + E I +F G S K+I + N + Y F+EF H A
Sbjct: 4 DLPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAA 61
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTD 180
L NG ++ E ++NWAT + +++ + F +FVGDL+ ++T
Sbjct: 62 SLAAMNGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITT 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 120 DDIKAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIR 178
Query: 241 IGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A Y+ T Q T + ++ P+N T++ GG+ +T+ +++ F +G
Sbjct: 179 TNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG 238
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ V++ K FV+F++ A A+ +NGT + G ++ WG+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 150/302 (49%), Gaps = 29/302 (9%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DA+S RS+++G++ + E +A +F G K+IR +++ YGF+++ H
Sbjct: 16 DATS--CRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSS----YGFVDYFDHR 69
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A L T NG QM Q+ ++NWA Y +G+R F +FVGDL+A+VTD L
Sbjct: 70 SAVAALSTLNGRQMFG--QSIKVNWA-YASGQREDTTAGHFNVFVGDLSAEVTDATLFAA 126
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
F +Y S A+V+ D+ +GRS+G+GFV F + E S++EM G TRP+R AA
Sbjct: 127 F-CIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCNWAAK 185
Query: 246 ------------TKKAATGQQYQKATYQNTQGSQGENDPNN----TTIFVGGLDPSVTDD 289
T + T ++ Q S + P TT++VG L +T
Sbjct: 186 TNNTIQADESKLTTRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYVGNLSQQITQA 245
Query: 290 ILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
L F G V V++ K GFV++ A A+ NG + G+S++ SWG
Sbjct: 246 ELHRQFHSLGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAANGRVIWGKSLKCSWGSK 305
Query: 348 PS 349
P+
Sbjct: 306 PT 307
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 164/360 (45%), Gaps = 49/360 (13%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 84 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 142
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 143 TLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 199
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG- 252
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 200 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 259
Query: 253 ------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
Q+ + + + TT++VG L P T + + +
Sbjct: 260 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPL 319
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ ++
Sbjct: 320 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGK----DKTP 375
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQ---------QPGSYQQPQ 405
AQ G + AQ Y P GFPG TY QPG+Y PQ
Sbjct: 376 SAQ----GAFDPAQPYSPQSAQAP---------GFPGTPTYYPQYGAQYGGQPGNYGGPQ 422
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 155/310 (50%), Gaps = 38/310 (12%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DA+S RS+++G++ + E+ +A +F G K+I+ ++++ YGF+++ H
Sbjct: 50 DATS--CRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSS----YGFVDYFDHR 103
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A + T NG + Q+ ++NWA Y +G+R G + IFVGDL+ +VTD L
Sbjct: 104 SAAAAIITLNGKLIFG--QSIKVNWA-YASGQREDTTG-HYNIFVGDLSPEVTDATLYAA 159
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI----- 241
F +Y A+V+ D+ +GRS+GYGFV F + E R++ EMNG +RP+R
Sbjct: 160 F-FMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATK 218
Query: 242 -----------GPAATKK--AATGQQYQKATYQNTQGSQG-------ENDPNNTTIFVGG 281
GP + + A Q ++ + Q G EN+P TT++VG
Sbjct: 219 STGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGN 278
Query: 282 LDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
L VT L F G V V++ K GFV++ A A+ NG + G+S
Sbjct: 279 LAHEVTQTELHRQFHALGVGVIEDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKS 338
Query: 340 IRLSWGRSPS 349
++ SWG P+
Sbjct: 339 VKCSWGSKPT 348
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +L E F A ++G K++ + YGFV + D ++
Sbjct: 56 SVYVGNIHIKVTEALLAEVF-ATVGPLEGCKLIKKEKSS----YGFVDYFDHRSAAAAII 110
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG L + +++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 111 TLNGKLIFGQSIKVNWAY----ASGQR--------------EDTTGHYNIFVGDLSPEVT 152
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ +R G FV F ++ AE+A++ +NG LG + IR
Sbjct: 153 DATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWLGSRPIR 212
Query: 342 LSWGRSPSNKQSD 354
+W + Q D
Sbjct: 213 CNWATKSTGSQED 225
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VT+ +L VF G L K+ ++ GFV + + A A+ LNG
Sbjct: 56 SVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSSYGFVDYFDHRSAAAAIITLNGK 115
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
+ GQSI+++W + ++ +N
Sbjct: 116 LIFGQSIKVNWAYASGQREDTTGHYN 141
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 91 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQR-EDTSS 142
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 143 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 202 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+ TT++VG L P VT L F G V V++ K GFV++ T E AL+
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY--NTHPEAALA 318
Query: 329 V-LNGTQ--LGGQSIRLSWGRSPS 349
+ + TQ L + I+ SWG P+
Sbjct: 319 IQMGNTQPYLFNRQIKCSWGNKPT 342
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 31/200 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++VG++ VT+ +LQE F + V+ +K++ D+++ YGFV + D ++
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTST-GPVESSKLIRKDKSS-----YGFVHYFDRRSAALAI 113
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +P+++ A ATGQ+ +++ N IFVG L P V
Sbjct: 114 LSLNGRHLFGQPIKVNWAY----ATGQREDTSSHFN--------------IFVGDLSPEV 155
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
TD L F + ++ ++ G FV F N+ A+ A++ +NG L + I
Sbjct: 156 TDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQI 215
Query: 341 RLSWGRSPSNKQSDQAQWNG 360
R +W + D+ +G
Sbjct: 216 RCNWATKGATSGDDKLSSDG 235
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ +F G + K+ + GFV + +R A A+
Sbjct: 54 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAI 113
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 114 LSLNGRHLFGQPIKVNWAYATGQREDTSSHFN 145
>gi|448523083|ref|XP_003868848.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis Co 90-125]
gi|380353188|emb|CCG25944.1| hypothetical protein CORT_0C05700 [Candida orthopsilosis]
Length = 444
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 27/293 (9%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFV----SGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I SI+ V S K++R++ Y F+ F A +
Sbjct: 79 MWMGDLDPSWTEES-IHSIWS---ALVQPPKSVKIMRDRLNPSKPSYCFVTFEDQEALDW 134
Query: 131 VLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDFTIFVGDLAADVTDYV 182
LQ NG +P++++ F+++ A+ G+G RQ G +F++F+GDLA DV +
Sbjct: 135 ALQR-NGQLIPNSQRKFKISHASAKNSTSGGAGSGHSRQSTG-EFSLFIGDLAQDVGEAA 192
Query: 183 LQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L TF Y + +K A+V+ D+ + KG+GFV+F +++ EM GV+ ++ +R+
Sbjct: 193 LYSTFNLKYPNQIKSARVIVDQDSKVGKGFGFVKFFTGEVMEKALKEMQGVMVGSKTIRV 252
Query: 242 GPAATKKAA-TGQQYQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTV 294
G AA + + K Y+ +Q + D NT I + GL T+ L+ +
Sbjct: 253 GIAAGSEVVQSSSHANKPDYKKIPITQSQPELEAGTDEKNTNISISGLSSKFTESELELM 312
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F +G+LV+ K+ + G+V+F +R AE A++ L + + G + L+WG S
Sbjct: 313 FLTFGDLVYCKLSRDLQRGYVKFVSRNAAELAMAHLTSSVVNGCRLDLTWGSS 365
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 142/292 (48%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 140
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 141 TLNGRRVHQSE--IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSA-FGS 197
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG- 252
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 198 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 257
Query: 253 ------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
Q+ + + + TT++VG L P T + + +
Sbjct: 258 QQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPYTTPNDVVPL 317
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+
Sbjct: 318 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGK 369
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 167/340 (49%), Gaps = 26/340 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY--------- 363
FV+F++ A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 241 SFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQ 300
Query: 364 -YGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
YG AQ Y PN + P YG Y QP S Q
Sbjct: 301 WYGNAQQIGQY-------VPNGWQ--VPAYGVYGQPWSQQ 331
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 162/350 (46%), Gaps = 37/350 (10%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYG----VAPDASSDGIR---------SLWIGDLQPWMEE 87
PPP+ P P+ T P G V S G R +L++G L + E
Sbjct: 24 APPPLHIPANNNPIPTAMTSPMGENSGVMSPTSPGGFRRSAPEPNKRALYVGGLDQRVTE 83
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
+ IF TG + K+I +K YGF+E+ AAER +QT NG ++ +E
Sbjct: 84 DVLRQIFETTGHVQNVKIIPDKNAK-GFNYGFVEYDDPGAAERAMQTLNGRRVHQSE--I 140
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
R+NWA ++D F IFVGDL+ +V D +L + F A + SV A+V+ D TGR
Sbjct: 141 RVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSA-FGSVSEARVMWDMKTGR 199
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT-------- 259
S+GYGFV F D E ++++ M+G +R +R A K + Q Q
Sbjct: 200 SRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGLTPTT 259
Query: 260 ----YQNTQGSQGEND------PN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
+Q G D P TT++VG L P T + + +F +G +V + A
Sbjct: 260 PFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQA 319
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP-SNKQSDQAQ 357
+ F++ A A+ +NG + G+ ++ SWG+ SN+ D AQ
Sbjct: 320 DRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTSNQGFDPAQ 369
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 91 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQR-EDTSS 142
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 143 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 201
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 202 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+ TT++VG L P VT L F G V V++ K GFV++ T E AL+
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY--NTHPEAALA 318
Query: 329 VLNGTQ---LGGQSIRLSWGRSPS 349
+ G L + I+ SWG P+
Sbjct: 319 IQMGNTQPYLFNRQIKCSWGNKPT 342
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 31/200 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++VG++ VT+ +LQE F + V+ +K++ D+++ YGFV + D ++
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTST-GPVESSKLIRKDKSS-----YGFVHYFDRRSAALAI 113
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +P+++ A ATGQ+ +++ N IFVG L P V
Sbjct: 114 LSLNGRHLFGQPIKVNWAY----ATGQREDTSSHFN--------------IFVGDLSPEV 155
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
TD L F + ++ ++ G FV F N+ A+ A++ +NG L + I
Sbjct: 156 TDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQI 215
Query: 341 RLSWGRSPSNKQSDQAQWNG 360
R +W + D+ +G
Sbjct: 216 RCNWATKGATSGDDKLSSDG 235
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ +F G + K+ + GFV + +R A A+
Sbjct: 54 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAI 113
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 114 LSLNGRHLFGQPIKVNWAYATGQREDTSSHFN 145
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 149/298 (50%), Gaps = 28/298 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAA 127
R+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ A
Sbjct: 86 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGA 145
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 146 AERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF 203
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + V A+V+ D TGRS+GYGFV F D ++ R+++ M+G +R +R A K
Sbjct: 204 -STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWLGSRAIRCNWANQK 262
Query: 248 -KAATGQQYQKAT------------YQNTQGSQGEN-----DPN-NTTIFVGGLDPSVTD 288
+ + QQ A+ + TQG Q + P TT +VG L P +
Sbjct: 263 GQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQ 322
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L +F +G + + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 323 SDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 380
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + IF TG S K+
Sbjct: 33 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 92
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+ + +A + + NG + Q ++NWA Y G+R +D
Sbjct: 93 IRKDKSS----YGFVHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YATGQR-EDTSS 144
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L ++F +V+SS A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 145 HFNIFVGDLSPEVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 203
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ EMNG S+R +R ATK A +G K+ + T GS EN
Sbjct: 204 INEMNGKWLSSRQIRCN-WATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPEN 262
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+ TT++VG L P VT L F G V V++ K GFV++ T E AL+
Sbjct: 263 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRY--NTHPEAALA 320
Query: 329 V-LNGTQ--LGGQSIRLSWGRSPS 349
+ + TQ L + I+ SWG P+
Sbjct: 321 IQMGNTQPYLFNRQIKCSWGNKPT 344
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 31/200 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSM 226
+++VG++ VT+ +LQE F + V+ +K++ D+++ YGFV + D ++
Sbjct: 62 SVYVGNIHTQVTEPLLQEIFTST-GPVESSKLIRKDKSS-----YGFVHYFDRRSAALAI 115
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+NG +P+++ A ATGQ+ +++ N IFVG L P V
Sbjct: 116 LSLNGRHLFGQPIKVNWAY----ATGQREDTSSHFN--------------IFVGDLSPEV 157
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSI 340
TD L F + ++ ++ G FV F N+ A+ A++ +NG L + I
Sbjct: 158 TDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQI 217
Query: 341 RLSWGRSPSNKQSDQAQWNG 360
R +W + D+ +G
Sbjct: 218 RCNWATKGATSGDDKLSSDG 237
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ +F G + K+ + GFV + +R A A+
Sbjct: 56 DPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAI 115
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 116 LSLNGRHLFGQPIKVNWAYATGQREDTSSHFN 147
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E +I ++FG GE K+IR ++ Y F+EF SH AA L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPG---NDPYAFLEFTSHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 251 TGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPA 308
G K Q T ++ P NTT++ GG +V T+D+++ F Q+G++ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K F++F + A A+ + T++ G ++ WG+ N D N A
Sbjct: 242 DKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGK--ENGGGDNQSTNNATAAPPAM 299
Query: 369 GYEAYGYAPPTQDPNMYYG-GFPGYGTYQQPGSYQQ 403
G + P Q +Y G+P Y PG YQQ
Sbjct: 300 GAQTQYPYPYQQGMGYWYAQGYPALQGYMAPGYYQQ 335
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 37/200 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDF------- 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQS 202
Query: 168 -----TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SPTNTTVYCGGFTSNVITEDLMQNTF-SQFGQIQDVRVF------RDKGYAFIRFTTKEA 255
Query: 222 QLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAHAIEATHNTEISGHIVKC 275
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 175/378 (46%), Gaps = 51/378 (13%)
Query: 53 PPPSQQTQPYG-----VAPDASSDGIR---------SLWIGDLQPWMEESYIASIFGHTG 98
P P+ T P G ++PD++ +R +L++G L P + E + IF TG
Sbjct: 54 PIPTAITSPMGENGGVMSPDSAGGFVRRAAPEPNKRALYVGGLDPRVTEEILRQIFETTG 113
Query: 99 EFVSGKVIRNKQTNF--SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATY 154
+ K+I +K S+G YGF+E+ AAER +QT NG ++ E R+NWA
Sbjct: 114 HVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAE--IRVNWAYQ 171
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
++D F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGF
Sbjct: 172 SNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFA 230
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN------------ 262
F + + ++++ M+G +R +R A K + Q Q +
Sbjct: 231 AFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHF 290
Query: 263 -TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T G Q + P TT +VG L P T L +F +G +V + + + FV
Sbjct: 291 PTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQSDRGFAFV 350
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNKQSD--------QAQWNGGGYYG 365
+ + A A+ L+G + G+ ++ SWG ++P++ D QA GG+ G
Sbjct: 351 KMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPTSAGFDGSQQSYSPQAGPTPGGFPG 410
Query: 366 FAQGY-EAYGYAPPTQDP 382
Y YG PP P
Sbjct: 411 TPNAYFPQYGGMPPQAGP 428
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 10/234 (4%)
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDR 203
++ ++NWAT + + D F +F+GDL+ +V + L++ F A + V AKV+ D
Sbjct: 8 DREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAF-APFGEVSDAKVIRDS 66
Query: 204 TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT-GQQYQ-KATYQ 261
TT +SKGYGFV + E R++ +MNG R +R A K T GQQ + + +Y
Sbjct: 67 TTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYD 126
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
+ G P+NT++++G ++ SV D+ L+ F ++G +V V+I + FV+F +
Sbjct: 127 DVFNQTG---PDNTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKD 183
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQG-YEAYG 374
A A+ +NGT++GGQ+++ SWGR+P + Q N Y QG Y AYG
Sbjct: 184 SACNAIVKMNGTEIGGQTVKCSWGRTPEGHNNQQ---NAAANYNQMQGAYGAYG 234
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
++IGDL P ++ + F GE KVIR+ T S+GYGF+ + AER ++
Sbjct: 33 VFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQM 92
Query: 136 NGTQMPSTEQNFRLNWATY---------GAGERRQDD-----GPDFT-IFVGDLAADVTD 180
NG + + R NWAT E DD GPD T +++G++ V D
Sbjct: 93 NGQWLG--RRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGNVNQSVND 150
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
E RA + K ++V R +++G+ FVRF + ++ +MNG + ++
Sbjct: 151 ----EDLRAAFD--KFGRIVEVRIF-KTQGFAFVRFDKKDSACNAIVKMNGTEIGGQTVK 203
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
T + QQ A Y QG+ G P
Sbjct: 204 CSWGRTPEGHNNQQNAAANYNQMQGAYGAYGP 235
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 IRKEKSS----YGFIHYFDRRSAALAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+ IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HYNIFVGDLSPEVTDATLFACF-SVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS EN
Sbjct: 196 INDLTGKWLGSRQIRCN-WATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPEN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT L F G V V++ K GFV+F+ T AE AL+
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFS--THAEAALA 312
Query: 329 V-LNGTQ--LGGQSIRLSWGRSPS 349
+ + TQ L G+ I+ SWG P+
Sbjct: 313 IQMGNTQSILYGKQIKCSWGSKPT 336
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+ K++ + YGF+ + D ++
Sbjct: 54 SVYVGNIHTQVTEPLLQEVF-ASTGPVESCKLIRKEKSS----YGFIHYFDRRSAALAIL 108
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 109 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHYNIFVGDLSPEVT 150
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 151 DATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 210
Query: 342 LSW----GRSPSNKQSDQAQ 357
+W S +KQS A+
Sbjct: 211 CNWATKGATSNDDKQSSDAK 230
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSSYGFIHYFDRRSAALAI 107
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 108 LSLNGRHLFGQPIKVNWAYASGQREDTSGHYN 139
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 30/319 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 145
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K A
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 251 TGQQYQKATYQNTQGSQGENDPNN----------------TTIFVGGLDPSVTDDILKTV 294
Q Q T P + TT +VG L P T + + +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+ D
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGK-------D 375
Query: 355 QAQWNGGGYYGFAQGYEAY 373
+ GG GF +AY
Sbjct: 376 KTPNPQGGAAGFDPSQQAY 394
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 75 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 132
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 133 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 176
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALS 328
IFVG L V D+IL F +G + ++ + G FV F +R AE+ALS
Sbjct: 177 FHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALS 236
Query: 329 VLNGTQLGGQSIRLSW 344
++G LG ++IR +W
Sbjct: 237 SMDGEWLGSRAIRCNW 252
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 181
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ +T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 182 TQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 241
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 242 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 292
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 102 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 161
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 162 LGGRQIRTNWATRKPPAPKSTQ 183
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 162 DDG----PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
DDG D+++FVGDL +DV + +L E F++ S+ A+VV D T R KGYGFV F
Sbjct: 187 DDGNVQTADYSVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFK 246
Query: 218 DESEQLRSMTEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
E + + +++ G C S R MR+ A +K K + + + + DP NT
Sbjct: 247 TEKDYMTALSAFQGSRCGSSDRQMRVCNAFERKPEPVIDVTK--FHDFE----DMDPQNT 300
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
TIF+G LD +VT++ L+ VF ++GE+ + K K CGFV F +R A +A+ L+G+ +
Sbjct: 301 TIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENLHGSMI 360
Query: 336 GGQSIRLSWGRSPSNK 351
G + +RLSWGR + K
Sbjct: 361 GSKRVRLSWGRHNATK 376
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+++GDL + E+ + F + +V+ + +T +GYGF++F + L
Sbjct: 197 SVFVGDLGSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFKTEKDYMTALS 256
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR-------------QDDGP-DFTIFVGDLAADVT 179
F G++ S+++ R+ A ER+ +D P + TIF+G+L +VT
Sbjct: 257 AFQGSRCGSSDRQMRV----CNAFERKPEPVIDVTKFHDFEDMDPQNTTIFIGNLDHNVT 312
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L+ F + + AK KG GFV F D + ++ ++G + ++ +
Sbjct: 313 EEHLRVVFEE-FGEIAYAKATP------KKGCGFVHFFDRQDATEAIENLHGSMIGSKRV 365
Query: 240 RI--GPAATKKAATGQQYQK 257
R+ G K A YQ+
Sbjct: 366 RLSWGRHNATKCAIASMYQQ 385
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 87/241 (36%), Gaps = 55/241 (22%)
Query: 148 RLNWATYGAGERRQDDGPDFTIFVG-----DLAADVTDYVLQETFRAVYSSVKGAKVVTD 202
R WA G RR DDG + DL + YV F +V+ S+ K++ +
Sbjct: 27 RERWANARNGRRRVDDGRTRQVDRARGEERDLEKEDAAYVYY-AFSSVWKSLAHVKLIRN 85
Query: 203 RTTGRSKGYGFVRFG--DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
R TG S+GYGF+ F DE++ L + ++G C R TK+ A T
Sbjct: 86 RATGLSEGYGFIEFNSRDEADSLSKL--LSGSQCRERCTVNEMMTTKEDAVKMYSAPTTP 143
Query: 261 QNTQGS------------------------QGENDPNNTT--------------IFVGGL 282
+ ++GS + E D + T +FVG L
Sbjct: 144 KQSEGSSRSVLAPRSESGSSEGSPEIEADMEDEADIQDETDIVDDGNVQTADYSVFVGDL 203
Query: 283 DPSVTDDILKTVFGQYGELVH-------VKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
V + IL F H +K K GFV F ALS G++
Sbjct: 204 GSDVNETILCEHFKSKCSTAHNARVVVDLKTFRPKGYGFVDFKTEKDYMTALSAFQGSRC 263
Query: 336 G 336
G
Sbjct: 264 G 264
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 32/339 (9%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNIFG--QPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNT 263
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q K +
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQSSDSKIVVELI 229
Query: 264 QGSQGE-----ND------PNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
GS E ND P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDK 289
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
GFV+++ A A+ + N L G+ I+ SWG P+
Sbjct: 290 GFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +LQE F + +++G K++ + YGFV + D S ++
Sbjct: 47 SVYVGNIHPQVTDSLLQELF-STAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 102 TLNGRNIFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 144 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 203
Query: 342 LSW---GRSPSN-KQSDQAQ 357
+W G S S+ KQS ++
Sbjct: 204 CNWATKGASASDEKQSSDSK 223
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQ 325
G + + +++VG + P VTD +L+ +F G L K+ ++ GFV + +R+ A
Sbjct: 39 GFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAF 98
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
A+ LNG + GQ I+++W + S ++ +N
Sbjct: 99 AIVTLNGRNIFGQPIKVNWAYASSQREDTSGHFN 132
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 35/293 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y ++D F +FVGDL+ +V D VL + F A +
Sbjct: 73 QTLNGRKIFDTE--IRVNWA-YQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSA-FG 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A
Sbjct: 129 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA-------N 181
Query: 253 QQYQKATYQNTQGSQGENDP-------------------NNTTIFVGGLDPSVTDDILKT 293
Q+ Q A G+ G P NTT++VG L P T L
Sbjct: 182 QKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIP 241
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 242 LFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQMVHGRPIKCSWGK 294
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 10 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 69
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
AL LNG ++ IR++W S + D
Sbjct: 70 TALQTLNGRKIFDTEIRVNWAYQGSTAKED 99
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 141/292 (48%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 145
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 146 TLNGRRVHQSE--IRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSA-FGS 202
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K A
Sbjct: 203 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 262
Query: 251 TGQQYQKATYQNTQGSQGENDPNN----------------TTIFVGGLDPSVTDDILKTV 294
Q Q T P + TT +VG L P T + + +
Sbjct: 263 QQQAMQAMGLTPTTPFGHHQFPAHGVASYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVPL 322
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+
Sbjct: 323 FQNFGYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGK 374
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 155 GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
G G R + ++VG L VT+ VL++ F V+ K++ D+ + YGFV
Sbjct: 75 GFGRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETT-GHVQNVKIIPDKNA-KGYNYGFV 132
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+ D R+M +NG +R+ A YQ T S E+ N+
Sbjct: 133 EYDDPGAAERAMQTLNGRRVHQSEIRVNWA----------YQSNT------SSKEDTSNH 176
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALS 328
IFVG L V D+IL F +G + ++ + G FV F +R AE+ALS
Sbjct: 177 FHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALS 236
Query: 329 VLNGTQLGGQSIRLSW 344
++G LG ++IR +W
Sbjct: 237 SMDGEWLGSRAIRCNW 252
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ P + E + +F TG K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGFI + +A + + NG + Q ++NWA + +G+R +D
Sbjct: 86 IRKEKSS----YGFIHYYDRRSAALAIVSLNGRHL--FGQPIKVNWA-FASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFACF-SVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS EN
Sbjct: 197 INDLTGKWLGSRQIRCN-WATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG + P VT L F G V ++I K GFV++ T AE AL+
Sbjct: 256 NPQYTTVYVGNIAPEVTQLDLHRYFHALGAGVIEEIRIQRDKGFGFVRY--NTHAEAALA 313
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + LGG+ I+ SWG P+
Sbjct: 314 IQMGNTHSVLGGRQIKCSWGNKPT 337
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++FVG++ VT+ +LQE F + V+G K++ + YGF+ + D ++
Sbjct: 55 SVFVGNIHPQVTEPLLQEVFSST-GLVEGCKLIRKEKSS----YGFIHYYDRRSAALAIV 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ +++ N IFVG L P VT
Sbjct: 110 SLNGRHLFGQPIKVNWAF----ASGQREDTSSHFN--------------IFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 152 DAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W +N D+
Sbjct: 212 CNWATKGANSNDDK 225
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ ++FVG + P VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 49 DPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAI 108
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 109 VSLNGRHLFGQPIKVNWAFASGQREDTSSHFN 140
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 30/321 (9%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P V Q +P + P S RS+++G++ + + +A +F G K+
Sbjct: 8 PALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAGCKL 67
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGF+++ ++A + T +G Q+ + ++NWA Y +G+R +D
Sbjct: 68 IRKDKSS----YGFVDYHDRSSAALAIMTLHGRQLYG--EALKVNWA-YASGQR-EDTSG 119
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D TGRSKGYGFV F ++ E +
Sbjct: 120 HFHIFVGDLSPEVTDATLYACF-SVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSA 178
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----TQGSQG-----------EN 270
+ ++ G R +R ATK + + Q + QN T GS EN
Sbjct: 179 INDLTGKWLGNRQIRCN-WATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPEN 237
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L VT L F G V V++ K GFV++ A A+
Sbjct: 238 NPAYTTVYVGNLSHVVTQAELHGNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQ 297
Query: 329 VLNGTQLGGQSIRLSWGRSPS 349
+ NG + G+ ++ SWG P+
Sbjct: 298 MGNGKIVCGKPMKCSWGSKPT 318
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 37/321 (11%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P PS P G P RS+++G++ + E + +FG TG S K++R
Sbjct: 34 PQLEPIPSGNLPP-GFDPST----CRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRK 88
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D F
Sbjct: 89 EKSS----YGFIHYFDRRSAAMAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHFN 140
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDL+ +VTD L F +V+SS A+V+ D+ TGRS+G+GFV F ++ + ++ +
Sbjct: 141 IFVGDLSPEVTDSTLFACF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPN 273
+ G +R +R ATK A + Q K+ + T GS EN+P
Sbjct: 200 LTGKWLGSRQIRCN-WATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQ 258
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSV-L 330
TT++VG L P T L F G V V+I K GFV+++ T AE AL++ +
Sbjct: 259 YTTVYVGNLAPEATQVDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYS--THAEAALAIQM 316
Query: 331 NGTQ--LGGQSIRLSWGRSPS 349
TQ L G+ I+ SWG P+
Sbjct: 317 GNTQSFLCGKQIKCSWGSKPT 337
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F + V+ K+V + YGF+ + D ++
Sbjct: 55 SVYVGNVHTQVTEPLLQEVFGST-GLVESCKLVRKEKSS----YGFIHYFDRRSAAMAIL 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 110 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 152 DSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 212 CNWATKGAGSNDDK 225
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VFG G + K+ ++ GF+ + +R A A+
Sbjct: 49 DPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAI 108
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 140
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 145/284 (51%), Gaps = 16/284 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ + F +FVGDL+ ++T +
Sbjct: 65 AINGRKIMGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ Q T + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
V++ K FV+F++ A A+ +NGT + G ++ WG+
Sbjct: 242 EVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|150866410|ref|XP_001386002.2| hypothetical protein PICST_62299 [Scheffersomyces stipitis CBS
6054]
gi|149387666|gb|ABN67973.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 446
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 154/295 (52%), Gaps = 24/295 (8%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+W+G L P W EES IA+I+ G VS K++R+K Y F+ F + + +Q
Sbjct: 85 IWMGGLDPTWTEES-IANIWQTVGVPPVSVKIMRDKFNTTKPPYSFVTFANEKEVDTAVQ 143
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP--------DFTIFVGDLAADVTDYVLQE 185
NG +P + + F++N+A G R D + +IF+GDLA DVT+ ++
Sbjct: 144 K-NGLVIPGSARTFKINYAG-GPNSRYPDSSNSRQIAPKNEHSIFIGDLALDVTEDLIFA 201
Query: 186 TFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
F + VK K++ D+ TG +KG+GFVRF + + R++ EMNGV+ +R +R+G A
Sbjct: 202 KFNTQFPGQVKQVKIMFDQQTGANKGFGFVRFTNIEIKNRALKEMNGVVVGSRAIRVGQA 261
Query: 245 ATKK-------AATGQQYQKATYQNTQGSQGEN---DPNNTTIFVGGLDPSVTDDILKTV 294
+ A + ++ + +Q N DPNNTT+ + GL T+D L
Sbjct: 262 SGSNSGGFSSPAPESENHEISRVHLSQSQPALNQFTDPNNTTLSITGLSSKFTEDELALH 321
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
F +G++V K+ + ++F +R+ AE A+ L+G + +I ++WG+ S
Sbjct: 322 FIAFGDIVACKLSDDLQSASIKFFSRSAAEWAVLFLHGAIINDCNISITWGKDSS 376
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 32/339 (9%)
Query: 31 QQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEE 87
Q Q+ + + P + P + PP Q +P + P S RS+++G++ P + +
Sbjct: 2 QPQRLRQHAMLQPSLYHHPALLTPP--QIEPILSGNLPPGFDSSSCRSVYVGNIHPQVTD 59
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
S + +F G K+IR ++++ YGF+++ ++A + T NG + Q
Sbjct: 60 SLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVTLNGRNI--FGQPI 113
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA A +R+D F IFVGDL+ +VTD L F +VY S A+V+ D+ TGR
Sbjct: 114 KVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGR 170
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNT 263
S+G+GFV F ++ + ++ ++ G +R +R ATK A+ + Q K +
Sbjct: 171 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN-WATKGASASDEKQSSDSKIVVELI 229
Query: 264 QGSQGE-----ND------PNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGK 310
GS E ND P TT++VG L P VT L F G + V++ K
Sbjct: 230 NGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDK 289
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
GFV+++ A A+ + N L G+ I+ SWG P+
Sbjct: 290 GFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSKPT 328
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +LQE F + +++G K++ + YGFV + D S ++
Sbjct: 47 SVYVGNIHPQVTDSLLQELF-STAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIV 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 102 TLNGRNIFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 144 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 203
Query: 342 LSW---GRSPSN-KQSDQAQ 357
+W G S S+ KQS ++
Sbjct: 204 CNWATKGASASDEKQSSDSK 223
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VTD +L+ +F G L K+ ++ GFV + +R+ A A+ LNG
Sbjct: 47 SVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGR 106
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
+ GQ I+++W + S ++ +N
Sbjct: 107 NIFGQPIKVNWAYASSQREDTSGHFN 132
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 148/281 (52%), Gaps = 7/281 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGN--DPYCFVEFFEHRHAAASLA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKIMGKE--VKVNWATSPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGR 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKA 181
Query: 254 QYQKAT-YQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T + + ++ P+N T++ GG+ +T+ +++ F +G+++ V++ K
Sbjct: 182 TYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGY 241
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
FV+F + A A+ +NGT L G ++ WG+ ++ S
Sbjct: 242 SFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTDMVS 282
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 27/194 (13%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQI-GPCKSCKMIVD--TAGNDPYCFVEFFEHRH 59
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
S+ MNG + G++ K + + SQ ++ N+ +FVG
Sbjct: 60 AAASLAAMNG----------------RKIMGKEV-KVNWATSPSSQKKDTSNHFHVFVGD 102
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQL 335
L P +T D ++ F +G + ++ K GFV F N+ AE A+ + G L
Sbjct: 103 LSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 162
Query: 336 GGQSIRLSWG-RSP 348
GG+ IR +W R P
Sbjct: 163 GGRQIRTNWATRKP 176
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAE 324
+D T++VG L VT+ ++ +FGQ G K+ AG C FV+F A
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYC-FVEFFEHRHAA 61
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+L+ +NG ++ G+ ++++W SPS+++ D
Sbjct: 62 ASLAAMNGRKIMGKEVKVNWATSPSSQKKD 91
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 159/323 (49%), Gaps = 36/323 (11%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 32 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS 91
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 92 S----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFV 143
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 144 GDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNG 202
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQGE------------ND--P 272
+R +R A K A G + + K+ + T G+ GE ND P
Sbjct: 203 RWLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAP 260
Query: 273 NN----TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQA 326
N TT++VG L P VT L F G + V++ K GFV+++ A A
Sbjct: 261 ENNLQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALA 320
Query: 327 LSVLNGTQLGGQSIRLSWGRSPS 349
+ + N L G+ I+ SWG P+
Sbjct: 321 IQMGNARILCGKPIKCSWGSKPT 343
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F + ++G K++ + YGFV + D S+
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSST-GPLEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 110 TLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHYNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 152 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 212 CNWATKGAGGNEDK 225
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G L K+ ++ GFV + +R A ++ LNG
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGR 114
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 115 HLFGQPIKVNWAYASSQREDTSGHYN 140
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 30/301 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQ 140
Query: 134 TFNGTQM------PSTEQN---FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
T NG ++ P T +N R+NWA ++D F IFVGDL+ +V D VL
Sbjct: 141 TLNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLT 200
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+ F A + SV A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A
Sbjct: 201 QAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWA 259
Query: 245 ATKKAATG-------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
K + Q+ + + + TT++VG L P
Sbjct: 260 NQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQTPSWQTTVYVGNLTPY 319
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
T + + +F +G +V + A + F++ + A A+ +NG + G+ ++ SWG
Sbjct: 320 TTPNDVVPLFQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWG 379
Query: 346 R 346
+
Sbjct: 380 K 380
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 144/274 (52%), Gaps = 7/274 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAASALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+F + A A+ +NGT + G ++ WG+
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 274
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 30/321 (9%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P P + Q +P + P S RS+++G++ + +S + +F G K+
Sbjct: 49 PHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKL 108
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++F GF+++ +A + + NG Q+ Q ++NWA A +R+D
Sbjct: 109 IRKEKSSF----GFVDYYDRRSAALAIVSLNGRQL--FGQPIKVNWAY--ASTQREDTSG 160
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL +VTD L F A YS+ A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 161 HFNIFVGDLCPEVTDAALFAFFSA-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 219
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ---------------KATYQNTQGSQGEN 270
+ E+NG R +R ATK A G++ Q +A +N EN
Sbjct: 220 INELNGKWLGNRQIRCN-WATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPEN 278
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L + + + F G + V++ K GFV+++ A A+
Sbjct: 279 NPQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQ 338
Query: 329 VLNGTQLGGQSIRLSWGRSPS 349
NG +GG+ I+ SWG P+
Sbjct: 339 TGNGQLVGGRQIKCSWGSKPT 359
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +L E F+++ V+G K++ + +GFV + D ++
Sbjct: 78 SVYVGNIHLQVTDSLLHEVFQSI-GPVEGCKLIRKEKSS----FGFVDYYDRRSAALAIV 132
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y +TQ E+ + IFVG L P VT
Sbjct: 133 SLNGRQLFGQPIKVNWA---------------YASTQR---EDTSGHFNIFVGDLCPEVT 174
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 175 DAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIR 234
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD 381
+W +N ++ + G G G +D
Sbjct: 235 CNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANED 274
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 166/357 (46%), Gaps = 43/357 (12%)
Query: 30 SQQQQQQHQTPVP-PPVGWTPQPVPPPSQQTQPYGVAPDASSDG--------------IR 74
+Q Q QQH P P PV P P+ + P P + + G R
Sbjct: 25 NQPQAQQHMPPPPLAPVIIPQNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNKR 84
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAA 128
+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ AA
Sbjct: 85 ALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAA 144
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 145 ERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF- 201
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK- 247
+ + V A+V+ D TGRS+GYGFV F D ++ R++ M+G +R +R A K
Sbjct: 202 STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKG 261
Query: 248 KAATGQQYQKAT------------YQNTQGSQGEN-----DPN-NTTIFVGGLDPSVTDD 289
+ + QQ A+ + T G Q + P TT +VG L P +
Sbjct: 262 QPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQA 321
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L +F +G + + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 322 DLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 142/274 (51%), Gaps = 7/274 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYDHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT 180
Query: 254 QYQ-KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ + + + + ++ P+N T++ GG+ +T+ +++ F +G+++ V++ K
Sbjct: 181 TYESNSKHLSFEEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+F + A A+ +NGT + G ++ WG+
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWGK 274
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F D
Sbjct: 2 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYDHR 57
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 58 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K F +G + ++ K GFV F N+ AE A+ + G
Sbjct: 101 DLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQW 160
Query: 335 LGGQSIRLSWG-RSP 348
LGG+ IR +W R P
Sbjct: 161 LGGRQIRTNWATRKP 175
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAEQALSVL 330
T++VG L VT+ ++ VF Q G K+ AG C FV+F + A +L+ +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHAAASLAAM 66
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSD 354
NG ++ G+ ++++W +P++++ D
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKD 90
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 35/340 (10%)
Query: 36 QHQTPVPPPVG--WTPQPVPPPSQQT--QPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q+ P+P + + P+ P S Q P AP+ + R+L++G L P + E +
Sbjct: 44 QNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNK---RALYVGGLDPRVTEDVLR 100
Query: 92 SIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
IF TG S K+I +K + S+G YGF+E+ AAER + T NG ++ + E
Sbjct: 101 QIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE- 159
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
R+NWA ++D F IFVGDL+ +V D VL + F + + V A+V+ D T
Sbjct: 160 -IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF-STFGPVSEARVMWDMKT 217
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATGQQYQKAT----- 259
GRS+GYGFV F D ++ R+++ M+G +R +R A K + + QQ A+
Sbjct: 218 GRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTP 277
Query: 260 -------YQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+ T G Q + TT +VG L P + L +F +G + +
Sbjct: 278 TTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRF 337
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 338 QSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 377
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 49/335 (14%)
Query: 55 PSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
P Q +P + P S RS+++G++ + E +A +FG G K+I+ +++
Sbjct: 57 PLSQIEPIPSGNLPPGFDSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEGCKLIKKEKS 116
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ H +A + NG Q+ Q ++NWA Y +G+R G ++IFV
Sbjct: 117 S----YGFVDYYDHRSAANSILHLNGKQI--YGQAIKVNWA-YASGQREDTTG-HYSIFV 168
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ +VTD L F ++Y S A+V+ D+ +GRS+G+GFV F ++ + ++ +M G
Sbjct: 169 GDLSPEVTDAALFACF-SIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTG 227
Query: 232 VLCSTRPMRI--------GPAATKKAATGQQYQKATYQNT-------------------- 263
+RP+R G + K + Q+ NT
Sbjct: 228 KTLGSRPIRCNWATKSSSGNQSDDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTG 287
Query: 264 -------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGF 314
Q S EN+P+ TT+++G L VT L F G V V++ K GF
Sbjct: 288 GQQKGGAQTSGPENNPSYTTVYIGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGF 347
Query: 315 VQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
V++ + A A+ + NG + G+SI+ SWG P+
Sbjct: 348 VRYRSHEEAALAIQLANGRVICGKSIKCSWGSKPT 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG+++ VT+ +L E F AV ++G K++ + YGFV + D S+
Sbjct: 80 SVYVGNISVHVTEGLLAEVFGAV-GPLEGCKLIKKEKSS----YGFVDYYDHRSAANSIL 134
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG + +++ A A+GQ+ E+ + +IFVG L P VT
Sbjct: 135 HLNGKQIYGQAIKVNWAY----ASGQR--------------EDTTGHYSIFVGDLSPEVT 176
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ + G LG + IR
Sbjct: 177 DAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKTLGSRPIR 236
Query: 342 LSWG-RSPSNKQSDQAQ 357
+W +S S QSD Q
Sbjct: 237 CNWATKSSSGNQSDDKQ 253
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 29/322 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFNCF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN---------------TQGSQGEN 270
+ E+ G +R +R ATK A +G+ Q + ++ T G EN
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+ TT++VG L P V+ L F G V V++ K GFV+++ A A+S
Sbjct: 256 NAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIS 315
Query: 329 VLN-GTQLGGQSIRLSWGRSPS 349
+ N + L G+ ++ SWG P+
Sbjct: 316 MGNTHSYLSGRQMKCSWGSKPT 337
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+ K++ + YGFV + D ++
Sbjct: 55 SVYVGNIHIQVTEPLLQEVF-ASTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAIL 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ +++ N IFVG L P VT
Sbjct: 110 SLNGRHLFGQPIKVNWAY----ASGQREDTSSHFN--------------IFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L F Y ++ ++ G FV F N+ A+ A+ + G LG + IR
Sbjct: 152 DAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 212 CNWATKGATSGEDK 225
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GFV + +R A A+
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAI 108
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQREDTSSHFN 140
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 293
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 162
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 LGGRQIRTNWATRKPPAPKSTQ 184
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 25/290 (8%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI---------GP 243
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ GP
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGP 191
Query: 244 AATKKAATGQQYQKATYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
+ T N QG S + P NTT++VG L P T L +F
Sbjct: 192 SPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 251
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 252 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 325 QALSVLNGTQLGGQSIRLSW 344
AL LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 293
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 162
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 LGGRQIRTNWATRKPPAPKSTQ 184
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 143/284 (50%), Gaps = 24/284 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ SH +A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREAS---NDPYAFIEYASHTSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D + IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRFFLKKE--IKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +S+GY FV F ++E ++ MNG +R +R P A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRD 181
Query: 249 AATGQQYQKA-----TYQNTQGSQGENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELV 302
+ G + K Y NT P NTT++ GG P ++TD++++ F Q+G++
Sbjct: 182 NSKGIKSGKTPGFEEIYNNT-------SPTNTTVYCGGFPPNTITDELIQKHFAQFGQIH 234
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
++ K F++FAN+ A +A+ + +++ G ++ WG+
Sbjct: 235 DTRVFKDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LD SVT+++L T+F Q G + KI + F+++A+ T A+ AL+ +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 333 TQLGGQSIRLSWGRSPSNK-QSDQAQ 357
+ I+++W SP N+ ++D +Q
Sbjct: 69 RFFLKKEIKVNWATSPGNQPKTDTSQ 94
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 293
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 162
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 LGGRQIRTNWATRKPPAPKSTQ 184
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 167/359 (46%), Gaps = 47/359 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ NF G YGF+E+ +AE L
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDR--NFQHGGLNYGFVEYYEMRSAETAL 168
Query: 133 QTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
QT G ++ TE R+NWA + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 169 QTLGGRKIFDTE--IRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAF-AAF 225
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI--------GP 243
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ G
Sbjct: 226 GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQGM 285
Query: 244 AATKKAATG--------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
AAT A + N + + NTT++ G L P T L +F
Sbjct: 286 AATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYNTTVYTGNLVPYSTQADLIPLF 345
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
+G +V +++ A + FV+ A A+ L GT + G+ ++ SWG+ ++ +
Sbjct: 346 QGFGYIVEIRMQADRGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKDRASADPNS 405
Query: 356 AQWNG------GGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQ----PGSYQQP 404
A +G G YG Q Y M G+P Y Y Q P Y QP
Sbjct: 406 APASGMPMAPVAGMYGMPQMY------------GMPQAGYPQYSGYPQYAAGPQGYGQP 452
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 32/318 (10%)
Query: 49 PQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
PQ P PS P G P RS+++G++ + E + +F TG K+IR
Sbjct: 38 PQIEPIPSGNLPP-GFDPST----CRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRK 92
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
++++ YGFI + AA + + NG + Q ++NWA Y +G+R +D F
Sbjct: 93 EKSS----YGFIHYFDRRAAALAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHFN 144
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + ++ +
Sbjct: 145 IFVGDLSPEVTDATLYACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 203
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPN 273
+ G +R +R AA K A++ Q K+ + T G+ EN+P
Sbjct: 204 LTGKWLGSRQIRCNWAA-KGASSNDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNPQ 262
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLN 331
TT++VG L P V L F G V V++ K GFV+F+ A A+ + N
Sbjct: 263 YTTVYVGNLAPEVAQPDLHRHFHALGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGN 322
Query: 332 GTQLGGQSIRLSWGRSPS 349
L G+ ++ SWG P+
Sbjct: 323 TQSLFGKQMKCSWGSKPT 340
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+G K++ + YGF+ + D ++
Sbjct: 59 SVYVGNIHTQVTEPLLQEVF-ASTGPVEGCKLIRKEKSS----YGFIHYFDRRAAALAIL 113
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 114 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 155
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 156 DATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIR 215
Query: 342 LSWGRSPSNKQSDQ 355
+W ++ D+
Sbjct: 216 CNWAAKGASSNDDK 229
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 53 DPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAI 112
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 113 LSLNGRHLFGQPIKVNWAYASGQREDTSGHFN 144
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 182/423 (43%), Gaps = 65/423 (15%)
Query: 41 VPPPVGWTPQPVPP-PSQQTQPY-----GVAPDASSDGIR---------SLWIGDLQPWM 85
+PPP PQ P P+ T P G+ S+ G R +L++G L +
Sbjct: 36 LPPPPLHIPQNTNPIPTAITSPRSGDQGGIMSPTSAGGFRRAAPEPNKRALYVGGLDQRV 95
Query: 86 EESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
E + IF TG + K+I +K YGF+E+ AAER +QT NG ++ +E
Sbjct: 96 TEDVLRQIFETTGHVQNVKIIPDKNAR-GYNYGFVEYDDPGAAERAMQTLNGRRVHQSE- 153
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
R+NWA ++D F IFVGDL+ +V D VL + F A + SV A+V+ D T
Sbjct: 154 -IRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKT 211
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG------------- 252
GRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 212 GRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTP 271
Query: 253 ------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
Q+ + + + TT +VG L P T + + +F +G +V +
Sbjct: 272 TTPYGHHQFPAHGVASYEVILTQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRF 331
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS-------------PSNKQS 353
A + F++ A A+ +NG + G+ ++ SWG+ P + QS
Sbjct: 332 QADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPNAQGGFDPAQPYSPQS 391
Query: 354 DQAQWNGGGYYGFAQGYEAYG---------YAPPTQDPNMYYGGFP-GYGTYQQPGSYQQ 403
QA GY G Y YG Y P YGG P GY Q G Y +
Sbjct: 392 AQAP----GYPGTPTFYPQYGAQYGGQPGNYGGPQTGSPAGYGGSPMGYAGPQSAGGYGR 447
Query: 404 PQQ 406
QQ
Sbjct: 448 GQQ 450
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 154/297 (51%), Gaps = 27/297 (9%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
S+ R+L++G+L P + + ++A++F G K+I + ++ + F+EF H A
Sbjct: 34 SEDPRTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQAS 93
Query: 130 RVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQ-DDGPDFTIFVGDLAADVTDYVLQET 186
+ LQ+ NG Q+ E+ R+NWA G+R + + F +FVGDL+A++ L+E
Sbjct: 94 QALQSMNGRQL--LEREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREA 151
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F + V AK++ D T ++KGYGFV + + R++ +MNG R +R AT
Sbjct: 152 F-LPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTN-WAT 209
Query: 247 KKAATGQQYQKATYQNTQGSQ-------------------GENDPNNTTIFVGGLDPSVT 287
+K ++ +N +G + E +NT+++VG ++ S+T
Sbjct: 210 RKPEEEGGERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADNTSVYVGNIN-SLT 268
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSW 344
+D ++ F ++G++V V+I + FV+F + A +A+ +N + GQ +R SW
Sbjct: 269 EDEIRRGFERFGQIVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCSW 325
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG K+
Sbjct: 29 YHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKL 88
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGFI + +A + + NG + Q ++NWA Y +G+R G
Sbjct: 89 IRKDKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQREDTSG- 140
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+ IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ + S
Sbjct: 141 HYNIFVGDLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSS 199
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A ++ Q K+ + T GS EN
Sbjct: 200 INDLTGKWLGSRQIRCN-WATKGAGGNEEKQNSDAKSVVELTNGSSEDGKETSNSDAPEN 258
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT L F G V V++ K GFV+++ T AE AL+
Sbjct: 259 NPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVMEEVRVQRDKGFGFVRYS--THAEAALA 316
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + L G+ I+ SWG P+
Sbjct: 317 IQMGNAQSLLCGKPIKCSWGSKPT 340
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ + GF+ + +R A A+
Sbjct: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAI 111
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 112 LSLNGRHLFGQPIKVNWAYASGQREDTSGHYN 143
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 145/283 (51%), Gaps = 19/283 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G+ K+I S+ Y F+EFV+H+ A +
Sbjct: 13 RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPG---SDPYCFVEFVNHSDASSAIT 69
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGE---RRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
N E R+NWA+ + R D IFVGDL+ + L+E F +
Sbjct: 70 AMNARMCLGRE--LRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLREAF-SP 126
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK-- 248
+ + +VV D TT +SKGYGFV F ++ + ++ M+G +R +R A+ K
Sbjct: 127 FGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWASRKPNH 186
Query: 249 ----AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD-PSVTDDILKTVFGQYGELVH 303
+ G ++ Y ++ P+N T++ GGL+ + ++D L+ F ++GE+V
Sbjct: 187 KETGSYIGGHHRALNYDEVFA---QSSPSNCTVYCGGLNQMASSEDFLRQAFDEFGEIVD 243
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ K F++F ++ A +A+ + + +GGQ+++ SWG+
Sbjct: 244 IRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGK 286
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
QD G T++VG+L + VT+ ++ F + +KG K++ + S Y FV F + S
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQM-GQIKGCKIIHEPG---SDPYCFVEFVNHS 62
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++T MN +C R +R+ A++ Q+ T S+ + IFVG
Sbjct: 63 DASSAITAMNARMCLGRELRVNWASSA-------IQQQTPHRPDTSKHHH------IFVG 109
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + L+ F +GE+ ++ K GFV F N+ AE A+ ++G+
Sbjct: 110 DLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSW 169
Query: 335 LGGQSIRLSWG-RSPSNKQS 353
LG ++IR +W R P++K++
Sbjct: 170 LGSRAIRTNWASRKPNHKET 189
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 39/204 (19%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W + QQ P+ PD S +++GDL P +E S + F GE +
Sbjct: 83 VNWASSAI----QQQTPH--RPDTSKH--HHIFVGDLSPQIETSDLREAFSPFGEISDCR 134
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA----------TY 154
V+++ T S+GYGF+ F + AE + T +G+ + S + R NWA +Y
Sbjct: 135 VVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGS--RAIRTNWASRKPNHKETGSY 192
Query: 155 GAGERR---------QDDGPDFTIFVGDL--AADVTDYVLQETFRAVYSSVKGAKVVTDR 203
G R Q + T++ G L A D++ Q + + D
Sbjct: 193 IGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSEDFLRQ--------AFDEFGEIVDI 244
Query: 204 TTGRSKGYGFVRFGDESEQLRSMT 227
+ KGY F++F + R++
Sbjct: 245 RLFKDKGYAFIKFNSKESACRAIV 268
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 166/339 (48%), Gaps = 19/339 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E ++ ++FG GE K+IR ++ Y F+EF +HA+A L
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPG---NDPYAFLEFTNHASAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ ++L+E F A +
Sbjct: 65 AMNRRVF--LEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK----- 248
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGP 181
Query: 249 ---AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHV 304
A + ++ ++ T+ ++ P NTT++ GG +V T++++++ F Q+G++ V
Sbjct: 182 NEGAPSSKRVKQPTFDEVYN---QSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDV 238
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYY 364
++ K F++F + A A+ + T++ G +++ WG+ + +Q+ N
Sbjct: 239 RVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGTE-NQSTTNPPAAP 297
Query: 365 GFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQQ 403
Y YA Y G+P Y PG YQQ
Sbjct: 298 ASMGAQTQYPYAYQQGMGYWYTQGYPAIQGYMAPGYYQQ 336
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 51/246 (20%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L A VT+ L F + VKG K++ R G Y F+ F + +
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQI-GEVKGCKII--REPGNDP-YAFLEFTNHAS 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++ MN + + M++ + + G+Q + D N+ IFVG
Sbjct: 59 AATALAAMNRRVFLEKEMKV-----------------NWATSPGNQPKTDTSNHHHIFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + IL+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 102 DLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQW 161
Query: 335 LGGQSIRLSWGR-----------SPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPN 383
LG +SIR +W +PS+K+ Q ++ E Y + PT +
Sbjct: 162 LGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFD-----------EVYNQSSPT-NTT 209
Query: 384 MYYGGF 389
+Y GGF
Sbjct: 210 VYCGGF 215
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 38/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SSPTNTTVYCGGFTSNVITEELMQSTF-SQFGQIQDVRVF------RDKGYAFIRFTTKE 255
Query: 221 EQLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAAHAIEATHNTEISGHTVKC 276
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 165/329 (50%), Gaps = 12/329 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY-YGFAQGYE 371
FV+F + A A+ +NGT + G ++ WG+ + + Q N GY + Q +
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQWGQ 300
Query: 372 AYGYAPPTQD--PNMYYGGFPGYGTYQQP 398
YG A PN + P YG Y QP
Sbjct: 301 WYGNAQQIGQYMPNGWQ--VPAYGMYGQP 327
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
D ++++GDLA DVTD L F+ Y SV+ A+V+ D TG S+GYGFV+F + E+ ++
Sbjct: 112 DLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDKA 171
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
+ +MNG + +P+++ K+ + Q +T + + DPNNT I+V LD
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKRLNS----QTSTIPDLTST----DPNNTAIYVSQLDHY 223
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
+ + +L+T+FG YGE+ ++K+ K FV F NR AE A LN +G +++ WG
Sbjct: 224 IDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAFG-LNNFPVGNTRLKVQWG 282
Query: 346 RS 347
++
Sbjct: 283 KN 284
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SD SL+IGDL + + + + F G S +VI + T S GYGF++F S
Sbjct: 109 SDSDLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEK 168
Query: 129 ERVLQTFNG---TQMPSTEQN---FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYV 182
++ L NG P N RLN T + D + I+V L + + V
Sbjct: 169 DKALIDMNGFYINNKPIKVNNPTHKRLNSQTSTIPDLTSTDPNNTAIYVSQLDHYIDEGV 228
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
LQ F A Y + K++T++ + FV F
Sbjct: 229 LQTIFGA-YGEISYIKMLTNKFS------AFVNF 255
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 24/333 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 138 RLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 195
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 196 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 251
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 252 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 311
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 312 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 371
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQWN-GGGYYGF 366
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW YG
Sbjct: 372 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGN 431
Query: 367 AQGYEAYGYAPPTQDPNMYYGG-FPGYGTYQQP 398
Q Y Y M G P YG Y QP
Sbjct: 432 PQQYGQY----------MANGWQVPPYGVYGQP 454
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 12 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 71
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 72 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 123
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 124 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 182
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 183 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 241
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT L F +G V V++ K GFV++ T AE AL+
Sbjct: 242 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY--NTHAEAALA 299
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + L G+ I+ SWG P+
Sbjct: 300 IQMGNTQSILCGKPIKCSWGSKPT 323
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F A V+G K+V + YGF+ + D ++
Sbjct: 41 SVYVGNIHTQVSEPLLQEVF-ASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAIL 95
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 96 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 137
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ + G LG + IR
Sbjct: 138 DATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIR 197
Query: 342 LSWGR----SPSNKQSDQAQ 357
+W S +KQS A+
Sbjct: 198 CNWATKGAGSNDDKQSSDAK 217
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + V++ +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 41 SVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGR 100
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + ++ +N
Sbjct: 101 HLFGQPIKVNWAYASGQREDTSGHFN 126
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 12/333 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY-YGFAQGYE 371
F++F++ A A+ +NGT + G ++ WG+ + + Q N GY + Q +
Sbjct: 241 SFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPAYGQWGQ 300
Query: 372 AYGYAPPTQD--PNMYYGGFPGYGTYQQPGSYQ 402
YG A PN + P YG Y QP S Q
Sbjct: 301 WYGNAQQIGQYVPNGWQ--VPAYGMYGQPWSQQ 331
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 157/300 (52%), Gaps = 22/300 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + + S+ Y F+EFV H A
Sbjct: 10 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARA 67
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T N ++ E ++NWAT + +++ D F +FVGDL+ D+T ++ F A +
Sbjct: 68 TMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF-APFGH 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--- 250
+ A+V+ D TG+SKGYGFV F ++ + ++++M G R +R A K A
Sbjct: 124 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 183
Query: 251 ---TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
G ++ K TQ S P+N T++ GG+ +T+ +++ F +G+++ +++
Sbjct: 184 FQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 238
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-SPS-NKQSDQAQWNGGGYYG 365
K FV+F++ A A+ +NGT + G ++ WG+ SP K S Q ++N Y+G
Sbjct: 239 PDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQKNSQQVEYN---YWG 295
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 293
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ E A+ + G
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQW 162
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 LGGRQIRTNWATRKPPAPKSTQ 184
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 146/291 (50%), Gaps = 11/291 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAF-APFGK 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
FV+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 244 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 294
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 28/203 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP-NNTTIFV 279
+ ++ MNG + G++ K + T SQ + P N+ +FV
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKILPVNHFHVFV 102
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGT 333
G L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 GDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ 162
Query: 334 QLGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 WLGGRQIRTNWATRKPPAPKSTQ 185
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 196 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT L F +G V V++ K GFV++ T AE AL+
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY--NTHAEAALA 312
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + L G+ I+ SWG P+
Sbjct: 313 IQMGNTQSILCGKPIKCSWGSKPT 336
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F A V+G K+V + YGF+ + D ++
Sbjct: 54 SVYVGNIHTQVSEPLLQEVF-ASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAIL 108
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 109 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 150
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ + G LG + IR
Sbjct: 151 DATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIR 210
Query: 342 LSWGR----SPSNKQSDQAQ 357
+W S +KQS A+
Sbjct: 211 CNWATKGAGSNDDKQSSDAK 230
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + V++ +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 54 SVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGR 113
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + ++ +N
Sbjct: 114 HLFGQPIKVNWAYASGQREDTSGHFN 139
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR + + FIE+ +H +A+ L
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSI---DPFAFIEYANHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E R+NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRMFLKKE--IRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +S+GY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDP-SVTDDILKTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG P ++TD++++ F Q+G + ++
Sbjct: 182 NSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD 241
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++FA++ A +A+ + +++ G ++ WG+
Sbjct: 242 KGYAFIRFASKESAARAIEGTHNSEVQGHPVKCYWGK 278
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P ++ + F GE + +++R+ QT S GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------PDF-------- 167
V A AE + NG + S ++ R NW+T R++ P F
Sbjct: 145 VKKAEAENAIAMMNGQWLGS--RSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTS 202
Query: 168 ----TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
T++ G + +TD ++Q+ F A + + +V D KGY F+RF +
Sbjct: 203 PTNTTVYCGGFPPNAITDELIQKHF-AQFGHINDTRVFKD------KGYAFIRFASKESA 255
Query: 223 LRSM 226
R++
Sbjct: 256 ARAI 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC---GFVQFANRTCAEQALSVLNG 332
T++VG LD SVT+++L T+F Q G + KI F+++AN A+ AL+ +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNK 68
Query: 333 TQLGGQSIRLSWGRSPSNK-QSDQAQ 357
+ IR++W S N+ ++D +Q
Sbjct: 69 RMFLKKEIRVNWATSAGNQPKTDTSQ 94
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 152/296 (51%), Gaps = 18/296 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNT--QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q A+ + + ++ P N T++ GG+ ++D +++ F +G+++ +++ K
Sbjct: 181 NTQDASPKQLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS---------PSNKQSDQAQW 358
F++F++ A A+ +NGT + G ++ WG+ P +Q D QW
Sbjct: 241 YSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKESPDMAKTVQPVTEQVDYGQW 296
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 28/204 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T D ++ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 102 DLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQW 161
Query: 335 LGGQSIRLSWG--RSPSNKQSDQA 356
LGG+ IR +W + P+ K + A
Sbjct: 162 LGGRQIRTNWATRKPPAPKNTQDA 185
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 28/298 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAA 127
R+L++G L P + E + IF TG S K+I +K + S+G YGF+E+ A
Sbjct: 52 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 111
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER + T NG ++ + E R+NWA ++D F IFVGDL+ +V D VL + F
Sbjct: 112 AERGMATLNGRRIHNNE--IRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAF 169
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ + V A+V+ D TGRS+GYGFV F D ++ R++ M+G +R +R A K
Sbjct: 170 -STFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQK 228
Query: 248 -KAATGQQYQKAT------------YQNTQGSQGEN-----DPN-NTTIFVGGLDPSVTD 288
+ + QQ A+ + T G Q + P TT +VG L P +
Sbjct: 229 GQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQ 288
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L +F +G + + + + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 289 ADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 346
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 23/288 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L+IG++ P + E + +F G K+I ++ F G YGF+EF + AE+ L
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDR--TFQHGGLNYGFVEFYTMQGAEQAL 71
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT G ++ TE ++NWA Y ++D F +F GDL+ +VTD +LQ+TF A +
Sbjct: 72 QTLAGRKLFDTE--MKVNWA-YQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSA-FG 127
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D ++ ++ MNG +R +R+ A K
Sbjct: 128 SLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMM 187
Query: 253 QQYQKATYQNTQGSQG--------------ENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G + +NTT++VG L P T L +F Y
Sbjct: 188 GDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGY 247
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
G +V +++ A + FV+ A A++ L G G+S++ SWG+
Sbjct: 248 GYIVEIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQGRSLKCSWGK 295
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 32/315 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 55 PISNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 110
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 111 ----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 162
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 221
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGENDPNN---TT 276
+R +R A + G AT + G EN NN TT
Sbjct: 222 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTT 281
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
++VG L V D L F G + +++ K GFV+++ A A+ + NG
Sbjct: 282 VYVGNLGHEVNRDELHRHFYSLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLV 341
Query: 335 LGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 342 VRGKPIKCSWGNKPT 356
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG ++P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 125
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 126 MTLHGRHIYGQAIKVNWAYASTQREDTSGHFH 157
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 153/303 (50%), Gaps = 27/303 (8%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ P S RS+++G++ P + E + +F G K+IR ++++ YGF+++
Sbjct: 36 LPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYF 91
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
++A + T NG + Q+ ++NWA Y G+R G F IFVGDL+ +VTD L
Sbjct: 92 DRSSAAIAIVTLNGRNI--FGQSIKVNWA-YTRGQREDTSG-HFHIFVGDLSPEVTDATL 147
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R
Sbjct: 148 YACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCN- 205
Query: 244 AATKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTD 288
ATK A + Q K+ + T G+ E +P TT++VG L P VT
Sbjct: 206 WATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTS 265
Query: 289 DILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
L F G + V++ K GFV+++ A A+ + N L G+ I+ SWG
Sbjct: 266 VDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGS 325
Query: 347 SPS 349
P+
Sbjct: 326 KPT 328
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F + +++G K++ + YGFV + D S ++
Sbjct: 47 SVYVGNIHPQVSEPLLQELFSSA-GALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG + GQ K + T+G Q E+ + IFVG L P VT
Sbjct: 102 TLNG----------------RNIFGQSI-KVNWAYTRG-QREDTSGHFHIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 144 DATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIR 203
Query: 342 LSWGRSPSN 350
+W +N
Sbjct: 204 CNWATKGAN 212
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 148/321 (46%), Gaps = 16/321 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQSAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSF--LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++K F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS------DQAQWNGGGYY 364
F++F + A A+ + T++ G ++ WG+ + S QAQ G
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGVG 301
Query: 365 GFAQGY-EAYGYAPPTQDPNM 384
+A GY + GY P P M
Sbjct: 302 QYAYGYGQQMGYWYPQGYPQM 322
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++++TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNGVLCST-------RPMRIGPAATKKA 249
++ TE+NG + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQAL 327
+ N T++VG LD SV++D+L +F Q G + KI P FV+F N A AL
Sbjct: 4 ESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATAL 63
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNK 351
+ +N + ++++W SP N+
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 151/303 (49%), Gaps = 31/303 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D F +FVGDL+ +V D VL + F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAF-AAFG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 192
Query: 253 QQYQKATYQ---------------NTQG------SQGENDPN-NTTIFVGGLDPSVTDDI 290
A N QG S + P+ N+T++VG L P T
Sbjct: 193 AVGAGAPAPRPGGGGGVGTAPAPINFQGGPLSYESVVQQTPSYNSTVYVGNLVPYCTQAD 252
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L +F G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 253 LIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRTD 312
Query: 351 KQS 353
Q+
Sbjct: 313 GQA 315
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 14 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAE 73
Query: 325 QALSVLNGTQLGGQSIRLSWG 345
AL LNG ++ IR++W
Sbjct: 74 TALQTLNGRKIFDTEIRVNWA 94
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 150/290 (51%), Gaps = 17/290 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E I +F G S K+I + + S+ Y F+EFV H A
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T N ++ E ++NWAT + +++ D F +FVGDL+ D+T ++ F A +
Sbjct: 66 TMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF-APFGH 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--- 250
+ A+V+ D TG+SKGYGFV F ++ + ++++M G R +R A K A
Sbjct: 122 ISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKS 181
Query: 251 ---TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
G ++ K TQ S P+N T++ GG+ +T+ +++ F +G+++ +++
Sbjct: 182 FQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVF 236
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
K FV+F++ A A+ +NGT + G ++ WG+ + Q + Q
Sbjct: 237 PDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKESPDMQKNSQQ 286
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 25/299 (8%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D +L + F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSV 192
Query: 249 --------AATGQQYQKATYQN---TQGSQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
ATG +Q + S + P+ N+T++VG L P T L +F
Sbjct: 193 AVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQ 252
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ + Q
Sbjct: 253 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQ 311
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 29/305 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG + K+I +K YGF+E+ +AER +Q
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGSAERAMQ 146
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 147 TLNGRRVHQAE--IRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 203
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D E ++++ M+G +R +R A K +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 263
Query: 254 QYQKATYQN-------------TQGSQGENDPNN------TTIFVGGLDPSVTDDILKTV 294
Q Q T G + N TT +VG L P T + L +
Sbjct: 264 QQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLVPL 323
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
F +G +V + A + F++ A A+ LNG + G+ ++ S Q+
Sbjct: 324 FQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKC------STPQAQ 377
Query: 355 QAQWN 359
QAQ++
Sbjct: 378 QAQFD 382
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 154/307 (50%), Gaps = 27/307 (8%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---Y 117
P G+ A + L++G+L P + E + IF G K+I ++ N+ G Y
Sbjct: 3 PMGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNY 60
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+E++ +AE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+ +
Sbjct: 61 GFVEYMDMRSAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPE 117
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R
Sbjct: 118 VNDDVLAKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 176
Query: 238 PMRIGPA--ATKKAATGQQYQKATYQNTQGS------QG----------ENDPNNTTIFV 279
+R+ A T+ A Q +T G+ QG + NTT++V
Sbjct: 177 AIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYV 236
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
G L P T L +F G L +++ A + FV+ A A+ L G + G+
Sbjct: 237 GNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRP 296
Query: 340 IRLSWGR 346
I+ SWG+
Sbjct: 297 IKCSWGK 303
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 152/317 (47%), Gaps = 32/317 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
+ P S P G P RS+++G++ P + E+ + +F +G K+IR +++
Sbjct: 55 MEPVSNGNLPPGFDPST----CRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS 110
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+F GF+++ +A + T +G + Q ++NWA A +R+D F IFV
Sbjct: 111 SF----GFVDYYDRRSAALAIMTLHGRHIYG--QAIKVNWAF--ASTQREDTSGHFHIFV 162
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+++V D L F + Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 GDLSSEVNDATLYACF-STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG 221
Query: 232 VLCSTRPMRIGPAATKKAATGQQY--QKATYQNTQGSQG---------------ENDPNN 274
+R +R A A Q+ A GS EN+P+
Sbjct: 222 KWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDF 281
Query: 275 TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG 332
TT++VG L V D L F G + V++ K GF++++ A A+ + NG
Sbjct: 282 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANG 341
Query: 333 TQLGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 342 LVVRGKPIKCSWGNKPT 358
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + P+VT+++L VF G + K+ ++ GFV + +R A A+
Sbjct: 68 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDRRSAALAI 127
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 128 MTLHGRHIYGQAIKVNWAFASTQREDTSGHFH 159
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 32/315 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 55 PVSNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 110
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 111 ----GFVDYYDRRSAALAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 162
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++TEM G
Sbjct: 163 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 221
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGE---NDPNNTT 276
+R +R A + G AT + E N+P+ TT
Sbjct: 222 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTT 281
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
++VG L V D L F G + V++ K GFV+++ A A+ + NG+
Sbjct: 282 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSV 341
Query: 335 LGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 342 VRGKPIKCSWGVKPT 356
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG ++P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 66 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 125
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 126 MTLHGRHVYGQAIKVNWAYASTQREDTSGHFH 157
>gi|222624283|gb|EEE58415.1| hypothetical protein OsJ_09609 [Oryza sativa Japonica Group]
Length = 261
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 122/234 (52%), Gaps = 37/234 (15%)
Query: 168 TIFVGDL-------------AADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFV 214
T+++GDL A + DY+LQETFR Y SVKGAKVVTD TGRSKGYGFV
Sbjct: 17 TLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFV 76
Query: 215 RFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNN 274
+F DE+E+ R+MTEMNG+ CSTRPMRI A KK TG Q Q G+ +N
Sbjct: 77 KFADENEKNRAMTEMNGMYCSTRPMRISAAIPKK-TTGSQLQ-------YGAAKDNAAYI 128
Query: 275 T---TIFVGGLDPSVTDDILK-TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
T I P + +++ Q+ ++V + P AE+A+ L
Sbjct: 129 TIHKCIIHFHRQPCIQQQVMQFRKSNQFYQIVIRQTPLAS------------AEEAVQRL 176
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNM 384
+GT +G Q +RLSWGRSP++KQ + A A G E P P++
Sbjct: 177 HGTTIGQQVVRLSWGRSPASKQVEGATDMASAAGSHAPGMEKEEVYDPMNLPDV 230
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFG-HTGEFV-------------SGKVIRNKQTNFS 114
S + +R+LWIGDLQ W +E+Y+ + F + +++ KV+ + T S
Sbjct: 11 SLEEVRTLWIGDLQYWADENYLYNCFAPNRRDYLLQETFRVSYPSVKGAKVVTDPNTGRS 70
Query: 115 EGYGFIEFVSHAAAERVLQTFNG 137
+GYGF++F R + NG
Sbjct: 71 KGYGFVKFADENEKNRAMTEMNG 93
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 151/318 (47%), Gaps = 47/318 (14%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI----------------------- 106
SD R+L++G+L + E +IA++F G KVI
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGI 101
Query: 107 --------------RNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA 152
+ +T ++ Y F+EF H A + LQT N + E ++NWA
Sbjct: 102 GVPGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDRE--MKVNWA 159
Query: 153 TY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
G + + D F +FVGDL+++V + L+E F+ + V AKV+ D T +SKGY
Sbjct: 160 VEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP-FGDVSDAKVIRDTNTTKSKGY 218
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV + E R++ +MNG R +R A K G Q + + Y + N
Sbjct: 219 GFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---GDQEKPSHYNEKSYDEIYNQ 275
Query: 272 P--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
+NT+++VG + S+T+D ++ F +G + V+I + FV+F N+ A +A+
Sbjct: 276 TSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 334
Query: 330 LNGTQLGGQSIRLSWGRS 347
+N +GGQ +R SWG++
Sbjct: 335 MNNQDVGGQLVRCSWGKT 352
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
Y + + TD TG + Y FV F D + +++ MN L R M++ A
Sbjct: 106 YKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWA----VE 161
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---- 306
GQQ K + + +FVG L V + L+ F +G++ K+
Sbjct: 162 PGQQQSKI-----------DTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT 210
Query: 307 --PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
K GFV + R AE+A+ +NG LG ++IR +W Q + +N Y
Sbjct: 211 NTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSY 269
>gi|260942869|ref|XP_002615733.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
gi|238851023|gb|EEQ40487.1| hypothetical protein CLUG_04615 [Clavispora lusitaniae ATCC 42720]
Length = 462
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 148/303 (48%), Gaps = 35/303 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+GDL P E+ IA ++ GE + K+IR+K Y F+ F S A +
Sbjct: 80 LWMGDLDPQWTEASIADLWKQMGEEPTAVKIIRDKMG--KSQYCFVTFPSSNAVASAISK 137
Query: 135 FNGTQMPSTEQNFRLNWATYG--AGERRQDDGP-----------------DFTIFVGDLA 175
Q+P + + F+LNWA+ G+ R + GP +++IFVGDLA
Sbjct: 138 HRA-QVPGSSRFFKLNWASGSNPGGDARSNAGPGNRLSNASGSRLSKPQQEYSIFVGDLA 196
Query: 176 ADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLC 234
+DV++ +L F Y VK K++TD TG +KG+GFVRF Q ++ + ++
Sbjct: 197 SDVSESLLYTHFDKEYPGLVKQVKIMTDPHTGANKGFGFVRFVSPEAQQAALQDNKSIVI 256
Query: 235 STRPMRIGPA---------ATKKAATGQQYQKATYQNTQ--GSQGENDPNNTTIFVGGLD 283
+ R +R+G A A KK +T Q + + Q DPNN+ I + G+
Sbjct: 257 NQRKVRVGQANGGNQDASSALKKTSTEQPIPTTSNLSQQQPALSPSTDPNNSVICLHGIT 316
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
S+TDD L F +G +++ ++ +++ R+ +++AL + G + G + L
Sbjct: 317 SSITDDDLLAHFLPFGHIIYCRLNHVSGTAHIKYLLRSASQRALVFMQGVSICGNRLTLQ 376
Query: 344 WGR 346
WGR
Sbjct: 377 WGR 379
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 142/292 (48%), Gaps = 27/292 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L+ + E + IF TG + K+I +K YGF+E+ AAER +
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GFNYGFVEYDDPGAAERAMS 142
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG + R+NWA ++D F IFVGDL+ +V D +L + F A + +
Sbjct: 143 TLNG------RREIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSA-FGT 195
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGR++GYGFV F D S+ ++++ M+G +R +R A K +
Sbjct: 196 VSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIA 255
Query: 254 QYQK------------ATYQNTQGSQGEND------PN-NTTIFVGGLDPSVTDDILKTV 294
Q Q +Q G D PN TT +VG L P T + + +
Sbjct: 256 QQQAMQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQTPNWQTTCYVGNLTPYTTPNDVVPL 315
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + F++ + A A+ +NG + G+ ++ SWG+
Sbjct: 316 FQNFGFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGK 367
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 20/324 (6%)
Query: 49 PQPVPPPSQQTQ--------PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
P +PP S +T P G + + G ++G+L + E I +F G
Sbjct: 51 PLVLPPGSAETVDRETSSNVPAGHLGEETRPGASPRYVGNLSRDVTEVLILQLFSQIGPC 110
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
S K+I +N + Y F+EF H A L NG ++ E ++NWAT + +++
Sbjct: 111 KSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK 166
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
D F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F ++
Sbjct: 167 -DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKL 224
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFV 279
+ ++ M G R +R A K A + T Q + ++ P N T++
Sbjct: 225 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 284
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
GG+ +TD +++ F +G+++ +++ K FV+F+ A A+ +NGT + G
Sbjct: 285 GGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 344
Query: 340 IRLSWGRSPSN-----KQSDQAQW 358
++ WG+ + +Q D +QW
Sbjct: 345 VKCYWGKESPDMTKNFQQVDYSQW 368
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 165/350 (47%), Gaps = 27/350 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG ++ T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS-------------D 354
K F++F + A A+ + T++ G +++ WG+ ++ D
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPD 301
Query: 355 QAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYG-GFPGYGTYQQPGSYQQ 403
Q+ N G Y Y P Q +Y G+P Y PG YQQ
Sbjct: 302 QSGNNSSAAPPAMGGQSRYPY-PYQQGMGYWYAQGYPALQGYMAPGYYQQ 350
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 38/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRFTTKE 255
Query: 221 EQLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAAHAIEATHNTEISGHTVKC 276
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 6/133 (4%)
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
+ D N T++VGGLDP+V++D L+ F +YG++ VKIP GK+CGFVQF +RT AE+AL
Sbjct: 17 DGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQ 76
Query: 329 VLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY- 385
LNG+ +G Q++RLSWGRSPS+KQS D YYG Y YGYA P PNMY
Sbjct: 77 GLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPHPNMYA 135
Query: 386 --YGGFPGYGTYQ 396
YG +P YG+ Q
Sbjct: 136 AAYGAYPVYGSQQ 148
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 23 RTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQ 76
Query: 134 TFNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 77 GLNGSVI--GKQAVRLSW 92
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 30/299 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYIDMRAAETAL 76
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VLQ+ F A +
Sbjct: 77 QTLNGRKIFDTE--IRVNWA-YQGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSA-FG 132
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 133 SLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAM 192
Query: 253 QQYQKATY--------------QNTQGS-------QGENDPNNTTIFVGGLDPSVTDDIL 291
A N QG + N+T++VG L P T L
Sbjct: 193 GGGAPAPAAARPSPGLGGSPAPMNFQGGPISYESVVSQTPAYNSTVYVGNLVPYCTQADL 252
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
+F G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 253 IPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAAMAIIQLQGQMVHGRPIKCSWGKDRAD 311
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAEQALSV 329
++VG L P VT+ +L +F G + HVKI G GFV++ + AE AL
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 330 LNGTQLGGQSIRLSWGRSPSNKQSD 354
LNG ++ IR++W + + D
Sbjct: 79 LNGRKIFDTEIRVNWAYQGNQNKED 103
>gi|241951870|ref|XP_002418657.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223641996|emb|CAX43960.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 150/288 (52%), Gaps = 21/288 (7%)
Query: 76 LWIGDLQP-WMEESYIASIFGHTGEFVSG----KVIRNKQTNFSEGYGFIEFVSHAAAER 130
+W+GDL P W EES I + VS K++R++ Y F+ F + +
Sbjct: 84 MWMGDLDPHWTEES----IDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDKESIDL 139
Query: 131 VLQTFNGTQMPSTEQNFRLNWA---TYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
+Q NG ++P + + F+LN++ + G+ +R + +++IF+GDLA +V+D L F
Sbjct: 140 AIQR-NGQKVPDSNRVFKLNYSGRNSTGSNDRSTNLSNEYSIFIGDLAPEVSDATLFNKF 198
Query: 188 RAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
Y + +K AKV+ D +T +SKG+GFV+F R++ EM G ++ +R+G AA
Sbjct: 199 SMKYPNQIKQAKVIVDSSTRKSKGFGFVKFHSPETMNRALKEMQGYTIGSKAIRVGLAAG 258
Query: 247 KKAATGQQ-YQKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
T Q K + Q + DPNNT++ + GL +T+ L+ F +G
Sbjct: 259 SNVDTSSQPVTKLDHHRIPVPQPQPALNQFTDPNNTSLTISGLSGRITESELEQHFIGFG 318
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
++++ ++ + G+V+F +R+ E A + G + ++++WG S
Sbjct: 319 DIIYCRVSRDYQTGYVKFYSRSATESAFLNMYGYMINDCRLQIAWGSS 366
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMNKRVV--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG ++ T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F + A A+ + T++ G +++ WG+
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGK 280
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 38/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF +
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRFTTKE 255
Query: 221 EQLRSM-----TEMNG--VLC 234
++ TE++G V C
Sbjct: 256 AAAHAIEATHNTEISGHTVKC 276
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 153/307 (49%), Gaps = 27/307 (8%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---Y 117
P G+ A + L++G+L P + E + IF G K+I ++ N+ G Y
Sbjct: 3 PMGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNY 60
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
GF+E++ +AE LQT NG ++ TE R+NWA Y + ++D + +FVGDL+ +
Sbjct: 61 GFVEYMDMRSAETALQTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSGHYHVFVGDLSPE 117
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
V D VL + F A + ++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R
Sbjct: 118 VNDDVLAKAFSA-FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSR 176
Query: 238 PMRIGPAATKKAATGQQYQKATYQ-----------NTQG------SQGENDPN-NTTIFV 279
+R+ A K Q++ N QG S + P NTT++V
Sbjct: 177 AIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYV 236
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQS 339
G L P T L +F G L +++ A + FV+ A A+ L G + G+
Sbjct: 237 GNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRP 296
Query: 340 IRLSWGR 346
I+ SWG+
Sbjct: 297 IKCSWGK 303
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 165/321 (51%), Gaps = 30/321 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY + A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFTCF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN------------TQGSQGENDPN 273
+ E+ G +R +R ATK A +G+ Q + ++ T G EN+
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGDGKDTTNGEAPENNAQ 255
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLN 331
TT++VG L P V+ L F G V V++ K GFV+++ T E AL++
Sbjct: 256 YTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS--THVEAALAIQM 313
Query: 332 G---TQLGGQSIRLSWGRSPS 349
G + L G+ ++ SWG P+
Sbjct: 314 GNTHSYLSGRQMKCSWGSKPT 334
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+ K++ + YGFV + D ++
Sbjct: 55 SVYVGNIHIQVTEPLLQEVF-AGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAIL 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ ++ IFVG L P VT
Sbjct: 110 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSSHFNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L T F Y ++ ++ G FV F N+ A+ A+ + G LG + IR
Sbjct: 152 DAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 212 CNWATKGATSGEDK 225
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GFV + +R A A+
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAI 108
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQREDTSSHFN 140
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P S RS+++G++ + E + +F TG K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
+R ++++ YGFI + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 85 VRKEKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQR-EDTSG 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD L F +V+ S A+V+ D+ TGRS+G+GFV F ++ +
Sbjct: 137 HFNIFVGDLSPEVTDATLFACF-SVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSA 195
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG-----------EN 270
+ ++ G +R +R ATK A + Q K+ + T GS +N
Sbjct: 196 INDITGKWLGSRQIRCN-WATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDN 254
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+P TT++VG L P VT L F +G V V++ K GFV++ T AE AL+
Sbjct: 255 NPQYTTVYVGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRY--NTHAEAALA 312
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + L G+ I+ SWG P+
Sbjct: 313 IQMGNTQSILCGKPIKCSWGSKPT 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 33/200 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F A V+G K+V + YGF+ + D ++
Sbjct: 54 SVYVGNIHTQVSEPLLQEVF-ASTGPVEGCKLVRKEKSS----YGFIHYFDRRSAALAIL 108
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ + IFVG L P VT
Sbjct: 109 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSGHFNIFVGDLSPEVT 150
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ + G LG + IR
Sbjct: 151 DATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGKWLGSRQIR 210
Query: 342 LSWGR----SPSNKQSDQAQ 357
+W S +KQS A+
Sbjct: 211 CNWATKGAGSNDDKQSSDAK 230
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + V++ +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 54 SVYVGNIHTQVSEPLLQEVFASTGPVEGCKLVRKEKSSYGFIHYFDRRSAALAILSLNGR 113
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + ++ +N
Sbjct: 114 HLFGQPIKVNWAYASGQREDTSGHFN 139
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 7/274 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 123 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 182
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 183 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 242
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 243 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 276
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 102
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 162
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 LGGRQIRTNWATRKPPAPKSTQ 184
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 96/140 (68%), Gaps = 10/140 (7%)
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQ 325
SQ E D NTTIFVGGLDP+VTD+ L+ F QYGE+V VK+P GK CGFVQFA R AE+
Sbjct: 2 SQSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEE 61
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ----AQWNGGGYYGFAQGYEAYGYA-PPTQ 380
AL LNGT +G Q++RLSWGR+P+NKQ W+ G YYG A Y+ YGYA PP
Sbjct: 62 ALQKLNGTVIGKQTVRLSWGRNPANKQFRMDFGGNHWS-GTYYG-APVYDGYGYALPPPH 119
Query: 381 DPNM---YYGGFPGYGTYQQ 397
DP++ Y +P YG +QQ
Sbjct: 120 DPSIYAAAYAAYPIYGGHQQ 139
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + + + F GE VS KV K G GF++F AE LQ
Sbjct: 12 TIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGK------GCGFVQFAIRNNAEEALQK 65
Query: 135 FNGTQMPSTEQNFRLNWA 152
NGT + +Q RL+W
Sbjct: 66 LNGTVI--GKQTVRLSWG 81
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
D + TIFVG L +VTD L++ F + Y + KV KG GFV+F +
Sbjct: 7 DSTNTTIFVGGLDPNVTDEDLRQQF-SQYGEIVSVKVPV------GKGCGFVQFAIRNNA 59
Query: 223 LRSMTEMNGVLCSTRPMRI 241
++ ++NG + + +R+
Sbjct: 60 EEALQKLNGTVIGKQTVRL 78
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 137/278 (49%), Gaps = 14/278 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L ++E + ++F G K+IR ++ Y F+EF +H +A L
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPG---NDPYAFVEFTNHQSASTALI 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRVF--LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRA 181
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q ++ T+ + P NTT++ GG +TDD++ F ++G + +++
Sbjct: 182 EKPNQSKKQITFDEVYN---QTSPTNTTVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFK 238
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F ++ A A+ ++ T++ G +++ WG+
Sbjct: 239 DKGYAFIKFVSKESATHAIENIHNTEINGHTVKCFWGK 276
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR------------------QDDG 164
V A AE +Q NG + S ++ R NW+T R Q
Sbjct: 145 VKKAEAENAIQAMNGQWLGS--RSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVYNQTSP 202
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++ G A+ +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 TNTTVYCGGFASGLTDDLVTKTF-SRFGAIQDIRVFKD------KGYAFIKFVSKESATH 255
Query: 225 SM-----TEMNG--VLC--STRPMRIGPAATKKAATGQQYQKA 258
++ TE+NG V C +GP +ATG +A
Sbjct: 256 AIENIHNTEINGHTVKCFWGKENGGLGPDVNALSATGAAVSQA 298
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 95/182 (52%), Gaps = 31/182 (17%)
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG------- 252
+TD +G S+GYGFVRF +E +Q R++TEM GV C RPMRI A K + G
Sbjct: 1 MTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQ 60
Query: 253 ------------------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
Y Q DPNNTT+FVGGL VT+
Sbjct: 61 MQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTE 120
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS
Sbjct: 121 DELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQ 180
Query: 349 SN 350
+N
Sbjct: 181 NN 182
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 31/296 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 135
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 136 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSA-FGS 192
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 193 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 252
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T +
Sbjct: 253 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQT----PNWQTTCYVGNLTPYTTPND 308
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ +F +G +V + A + F++ A A+ +NG + G+ ++ SWG+
Sbjct: 309 VVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGK 364
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 150/291 (51%), Gaps = 7/291 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 291
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 19/308 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSF--LDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++K F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS---------PSNKQSDQAQWNGG 361
F++F + A A+ + T++ G ++ WG+ +N Q+ Q G
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAG 301
Query: 362 GY-YGFAQ 368
Y YG+ Q
Sbjct: 302 QYAYGYGQ 309
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++++TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNGVLCST-------RPMRIGPAATKKA 249
++ TE+NG + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQAL 327
+ N T++VG LD SV++D+L +F Q G + KI P FV+F N CA AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNK 351
+ +N + ++++W SP N+
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGNQ 87
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 35/350 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F++ A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y----------YGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
Y YG AQ Y PN + P YG Y QP S Q
Sbjct: 302 YPPTYGQWGQWYGNAQQIGQY-------VPNGWQ--VPAYGVYGQPWSQQ 342
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 48/327 (14%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +A++ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATKKAATGQQYQKATYQNTQGSQG---------------------------- 268
R +R+ A K G + AT + S G
Sbjct: 182 RAIRVNWANQKTQTGGTRTGGATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGA 241
Query: 269 ---------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
+ NTT++VG L P T L +F YG +V +++ A + FV+
Sbjct: 242 VGSYETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDT 301
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGR 346
A A++ L + G+ I+ SWG+
Sbjct: 302 HQNAALAITHLQNQLVHGRPIKCSWGK 328
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFAN 319
Q P ++VG L P VTD IL +F G +V KI G GFV++A+
Sbjct: 14 QSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYAD 73
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQAQWN 359
A+QAL+ LNG ++ IR++W + NK+ Q ++
Sbjct: 74 MRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYH 114
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 150/291 (51%), Gaps = 7/291 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 291
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 164/326 (50%), Gaps = 37/326 (11%)
Query: 47 WTPQPVPPPSQQTQPYGVAP---DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
+ P + PP + P G P DAS+ RS+++G++ + E + +FG G
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDAST--CRSVYVGNIHIQVTEPLLQEVFGSIGPVEGC 82
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
K++R ++++ YGF+ + +A + + NG + Q ++NWA A +R+D
Sbjct: 83 KLVRKEKSS----YGFVHYFDRRSAALAILSLNGRHL--FGQPIKVNWAY--ASSQREDT 134
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
F IFVGDL+ +VTD +L F A YSS A+V+ D+ TGRS+G+GFV F ++ E
Sbjct: 135 SGHFNIFVGDLSPEVTDAMLFACFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQ 193
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGS--QGENDPNN--- 274
++ ++ G +R +R AA K A + Q K+ + + GS G+ NN
Sbjct: 194 NAINDLTGKWLGSRQIRCNWAA-KGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAP 252
Query: 275 ------TTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQA 326
TT++VG L P V+ L F G V V+I K GFV++ T AE A
Sbjct: 253 ENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRY--NTHAEAA 310
Query: 327 LSVLNGTQ---LGGQSIRLSWGRSPS 349
L++ G L G+ I+ SWG P+
Sbjct: 311 LAIQMGNTRSFLCGRQIKCSWGSKPT 336
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F ++ V+G K+V + YGFV + D ++
Sbjct: 54 SVYVGNIHIQVTEPLLQEVFGSI-GPVEGCKLVRKEKSS----YGFVHYFDRRSAALAIL 108
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 109 SLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 150
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 151 DAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIR 210
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 211 CNWAAKGAGVNEDK 224
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VT+ +L+ VFG G + K+ ++ GFV + +R A A+ LNG
Sbjct: 54 SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGR 113
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 114 HLFGQPIKVNWAYASSQREDTSGHFN 139
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 158/305 (51%), Gaps = 21/305 (6%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
S+ R+L++G+L P + + ++A++F G KV + ++ + FIEF H A
Sbjct: 33 SEDPRTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFD---GMNDPFAFIEFGDHNQAG 89
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+ LQ NG + E R+NWA + R+Q+ F +FVGDL+++V L+E
Sbjct: 90 QALQAMNGRSLLDRE--MRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREA 147
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + V AK++ D T ++KGYGFV + + R++ +MNG R +R A
Sbjct: 148 FLA-FGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATR 206
Query: 247 K--------KAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
K + G++ ++ Y+ T + +NT+++VG ++ +T+D ++ F +
Sbjct: 207 KPEEEGGGERRDRGERGERRHYEKTFDEIYNQTSADNTSVYVGQIN-QLTEDEIRRAFDR 265
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+G + V++ + FV+F + A +A+ +N ++ GQ +R SWG+S + S +
Sbjct: 266 FGPINEVRMFKVQGYAFVKFEQKEAAARAIVQMNNAEIQGQQVRCSWGKSGESSASKSNE 325
Query: 358 WNGGG 362
GGG
Sbjct: 326 --GGG 328
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 14/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++FG G+ K+I ++ Y F+EF H +A L
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPG---NDPYCFVEFSDHQSAASALL 69
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + D IFVGDL+ ++ L++ F A +
Sbjct: 70 AMNKRLCFGKE--MKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLRDAF-APFGD 126
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D T +SKGYGFV F +++ ++ MNG +R +R A K A
Sbjct: 127 ISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRT 186
Query: 254 QYQKATYQNTQ-----GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q + +T+ ++ P N T++ GG+ +++++++ F YG + +++
Sbjct: 187 QAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFK 246
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR---SPSNKQSDQA 356
K F++F + A A+ + + + GQ+++ SWG+ P+N+Q Q
Sbjct: 247 DKGYAFIRFGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDPNNQQQPQV 297
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 37/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F G+ +V+R+ QT S+GYGF+ F
Sbjct: 90 GNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSF 149
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR---------------------Q 161
V A AE + T NG + S + R NWAT R Q
Sbjct: 150 VKKADAENAIGTMNGQWLGS--RAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQ 207
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ T++ G + +++ ++Q+TF + Y +++ +V D KGY F+RFG +
Sbjct: 208 SSPTNCTVYCGGITQGLSEELMQKTFSS-YGAIQEIRVFKD------KGYAFIRFGTKEA 260
Query: 222 QLRSM-----TEMNG--VLCS 235
++ +++NG V CS
Sbjct: 261 ATHAIVATHNSDVNGQTVKCS 281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQA 326
ND T++VG LD +VT+++L VFGQ G++ KI P FV+F++ A A
Sbjct: 8 NDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASA 67
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSN 350
L +N G+ ++++W SP N
Sbjct: 68 LLAMNKRLCFGKEMKVNWATSPGN 91
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 31/296 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AAER +Q
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAAERAMQ 133
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 134 TLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSA-FGS 190
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 191 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 250
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T +
Sbjct: 251 QQQAMQAMGMTPTTPFGHHQFPAHGVASYEMILAQT----PNWQTTCYVGNLTPYTTPND 306
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ +F +G ++ + A + F++ + A A+ +NG + G+ ++ SWG+
Sbjct: 307 VVPLFQNFGFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGK 362
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 150/291 (51%), Gaps = 7/291 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 291
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 147/327 (44%), Gaps = 57/327 (17%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT---------------------- 111
R+L++G L P + E + IF TG S K+I +K
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 112 NF-----------SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
N S+G YGFIE+ AAER +QT NG ++ +E R+NWA
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTA 219
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++D F IFVGDL+ +V D VL + F A SV A+V+ D TGRS+GYGFV F +
Sbjct: 220 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC-GSVSEARVMWDMKTGRSRGYGFVAFRE 278
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQG 265
++ ++++ M+G +R +R A K + Q Q T G
Sbjct: 279 RADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHG 338
Query: 266 SQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFAN 319
Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 339 VQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDT 398
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGR 346
A A+ LNG + G+ ++ SWG+
Sbjct: 399 HENAAMAICQLNGYNVNGRPLKCSWGK 425
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 41/116 (35%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------------------ 312
+PN ++VGGLDP VT+DILK +F G + VKI K
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVL 157
Query: 313 -----------------------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
GF+++ + AE+A+ LNG ++ IR++W
Sbjct: 158 YVYLNLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWA 213
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 150/291 (51%), Gaps = 7/291 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 291
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 144/274 (52%), Gaps = 7/274 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+F + A A+ +NGT + G ++ WG+
Sbjct: 241 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 274
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 157/333 (47%), Gaps = 13/333 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++ F A +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAF-APFGK 123
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K
Sbjct: 184 TQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGY 243
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEA 372
FV+F+ A A+ +NGT + G ++ WG+ + + Q F Y
Sbjct: 244 SFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVIQFFIALFKVDYSQ 303
Query: 373 YG-----YAPPTQDPNMYYGGF--PGYGTYQQP 398
+G Y P Q G+ P YG Y QP
Sbjct: 304 WGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 336
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 28/203 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDP-NNTTIFV 279
+ ++ MNG + G++ K + T SQ + P N+ +FV
Sbjct: 60 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKILPVNHFHVFV 102
Query: 280 GGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGT 333
G L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 103 GDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ 162
Query: 334 QLGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 163 WLGGRQIRTNWATRKPPAPKSTQ 185
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 19/308 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TDD++ F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS---------PSNKQSDQAQWNGG 361
F++F + A A+ + T++ G ++ WG+ +N Q+ Q G
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAG 301
Query: 362 GY-YGFAQ 368
Y YG+ Q
Sbjct: 302 QYAYGYGQ 309
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAIAAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDDLITKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNGVLCST-------RPMRIGPAATKKA 249
++ TE+NG + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQAL 327
+ N T++VG LD SV++++L +F Q G + KI P FV+F N CA AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNK 351
+ +N + ++++W SP N+
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 30/322 (9%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG + K+
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKL 84
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR +++ YGFI + +A + + NG + Q ++NWA Y +G+R G
Sbjct: 85 IRKDKSS----YGFIHYFDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQREDTSG- 136
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
+ IFVGDL+ +VTD L F +VY + A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 137 HYNIFVGDLSPEVTDATLFACF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 195
Query: 226 MTEMNGVLCSTRPMRI-------GPAATKKAATGQQYQKATYQNTQGSQG------ENDP 272
+ ++ G +R +R G K+ + + + TY ++ G + EN+P
Sbjct: 196 INDLTGKWLGSRQIRCNWATKGAGGTEEKQNSDAKSVVELTYGSSDGKETSNSDAPENNP 255
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVL 330
TT++VG L P T L F G V V++ K GFV+++ T AE AL++
Sbjct: 256 QYTTVYVGNLAPEATQLDLHHHFHSLGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQ 313
Query: 331 NG---TQLGGQSIRLSWGRSPS 349
G + L G+ I+ SWG P+
Sbjct: 314 MGNAQSLLCGKQIKCSWGSKPT 335
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ + GF+ + +R A A+
Sbjct: 48 DPSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEACKLIRKDKSSYGFIHYFDRRSAALAI 107
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 108 LSLNGRHLFGQPIKVNWAYASGQREDTSGHYN 139
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 175/387 (45%), Gaps = 53/387 (13%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P +Q + Y P+A L++G+L P + E + IF G K+I ++ NF
Sbjct: 91 PGAQPSNSYTGHPEAKR---AHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDR--NF 145
Query: 114 SEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER--RQDDGPDFT 168
G YGF+E+ +AE LQT G ++ E R+NWA + + ++D F
Sbjct: 146 QHGGLNYGFVEYYEMRSAETALQTLGGRKIFDNE--IRVNWAYQNSQQNAVKEDLSGHFH 203
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+FVGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++
Sbjct: 204 VFVGDLSPEVNDDVLAKAF-AAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIAT 262
Query: 229 MNGVLCSTRPMRIGPAATKK------------------------AATGQQYQKATYQNTQ 264
MNG +R +R+ A K A G N+
Sbjct: 263 MNGEWLGSRAIRVNWANQKNQGMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSY 322
Query: 265 GSQGENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
+ + P N+T++ G L P T L +F +G +V +++ A + FV+ A
Sbjct: 323 EAVVQQAPAYNSTVYTGNLVPYCTQADLIPLFQGFGYIVEIRMQADRGFAFVKLDTHENA 382
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNG------GGYYGFAQGYEAYGYAP 377
A+ L GT + G+ ++ SWG+ ++ + A G YG Q Y
Sbjct: 383 AMAIVNLTGTPVHGRPLKCSWGKDRASADPNSATNPAMAMAPVAGMYGMPQMYGM----- 437
Query: 378 PTQDPNMYYGGFPGYGTYQQPGSYQQP 404
P YG +PGY Y P +Y QP
Sbjct: 438 ----PQPGYGQYPGYPQYGAPQAYGQP 460
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 33/320 (10%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQT 111
PP + + P S RS+++G++ P + E + +F TG K+IR +++
Sbjct: 32 APPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKS 91
Query: 112 NFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
+ YGF+++ +A + T NG + Q ++NWA A +R+D + IFV
Sbjct: 92 S----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFV 143
Query: 172 GDLAADVTDYVLQETFRAVY----SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
GDL+ +VTD L F +VY S ++ A+V+ D+ TGRS+G+GFV F ++ E ++
Sbjct: 144 GDLSPEVTDATLFACF-SVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAIN 202
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQG-----------END 271
++NG +R +R A K A G + + K+ + T G+ EN+
Sbjct: 203 DLNGRWLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENN 260
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
TT++VG L P VT L F G + V++ K GFV+++ A A+ +
Sbjct: 261 LQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQM 320
Query: 330 LNGTQLGGQSIRLSWGRSPS 349
N L G+ I+ SWG P+
Sbjct: 321 GNARILCGKPIKCSWGSKPT 340
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F + ++G K++ + YGFV + D S+
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSST-GPLEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 110 TLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHYNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGE----------LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
D L F Y + K + GFV F N+ A+ A++ LNG LG
Sbjct: 152 DATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGS 211
Query: 338 QSIRLSWGRSPSNKQSDQ 355
+ IR +W + D+
Sbjct: 212 RQIRCNWATKGAGGNEDK 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G L K+ ++ GFV + +R A ++ LNG
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGR 114
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 115 HLFGQPIKVNWAYASSQREDTSGHYN 140
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 37/348 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 304
Query: 353 SDQAQWN-GGGYYGFAQGYEAYGYAPPTQDPNMYYGG-FPGYGTYQQP 398
D +QW G YG Q Y Y M G P YG Y QP
Sbjct: 305 VDYSQWGQWGQVYGNPQQYGQY----------MANGWQVPPYGVYGQP 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 165 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 201
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 47 WTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
+ P + PP + P G + P RS+++G++ + E + +F TG S K+
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++ YGF+ + +A + + NG + Q ++NWA Y +G+R +D
Sbjct: 86 IRKEKSS----YGFVHYFDRRSAGLAILSLNGRHLFG--QPIKVNWA-YASGQR-EDTSS 137
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL+ +VTD +L F +VY + A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 138 HFNIFVGDLSPEVTDAMLFTCF-SVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTA 196
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN---------------TQGSQGEN 270
+ E+ G +R +R ATK A +G+ Q + ++ T G EN
Sbjct: 197 IDEITGKWLGSRQIRCN-WATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPEN 255
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALS 328
+ TT++VG L P V+ L F G V V++ K GFV+++ T E AL+
Sbjct: 256 NAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS--THVEAALA 313
Query: 329 VLNG---TQLGGQSIRLSWGRSPS 349
+ G + L G+ ++ SWG P+
Sbjct: 314 IQMGNTHSYLSGRQMKCSWGSKPT 337
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F A V+ K++ + YGFV + D ++
Sbjct: 55 SVYVGNIHIQVTEPLLQEVF-AGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAIL 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A A+GQ+ E+ ++ IFVG L P VT
Sbjct: 110 SLNGRHLFGQPIKVNWAY----ASGQR--------------EDTSSHFNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L T F Y ++ ++ G FV F N+ A+ A+ + G LG + IR
Sbjct: 152 DAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIR 211
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 212 CNWATKGATSGEDK 225
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GFV + +R A A+
Sbjct: 49 DPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAI 108
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ + +N
Sbjct: 109 LSLNGRHLFGQPIKVNWAYASGQREDTSSHFN 140
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 149/315 (47%), Gaps = 32/315 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P S P G P RS+++G++ P + ES + +F G K+IR ++++F
Sbjct: 56 PVSNGNLPPGFDPST----CRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSF 111
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GF+++ +A + T +G + Q ++NWA A +R+D F IFVGD
Sbjct: 112 ----GFVDYYDRRSAALAIMTLHGRHVYG--QAIKVNWAY--ASTQREDTSGHFHIFVGD 163
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L+++V D L F A Y S A+V+ D TGRS+GYGFV F ++ E ++ EM G
Sbjct: 164 LSSEVNDATLYACFSA-YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKW 222
Query: 234 CSTRPMRIGPAATKKA--------------ATGQQYQKATYQNTQGSQGE---NDPNNTT 276
+R +R A + G AT + E N+P+ TT
Sbjct: 223 LGSRQIRCNWATKNNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTT 282
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
++VG L V D L F G + V++ K GFV+++ A A+ + NG+
Sbjct: 283 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSV 342
Query: 335 LGGQSIRLSWGRSPS 349
+ G+ I+ SWG P+
Sbjct: 343 VRGKPIKCSWGVKPT 357
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG ++P+VT+ +L VF G + K+ ++ GFV + +R A A+
Sbjct: 67 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRSAALAI 126
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
L+G + GQ+I+++W + + ++ ++
Sbjct: 127 MTLHGRHVYGQAIKVNWAYASTQREDTSGHFH 158
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 147/329 (44%), Gaps = 59/329 (17%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-------------------- 113
R+L++G L P + E + IF TG S K+I +K +
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 114 ---------------SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA 156
S+G YGFIE+ AAER +QT NG ++ +E R+NWA
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSN 219
Query: 157 GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
++D F IFVGDL+ +V D VL + F A SV A+V+ D TGRS+GYGFV F
Sbjct: 220 TASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC-GSVSEARVMWDMKTGRSRGYGFVAF 278
Query: 217 GDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------T 263
+ ++ ++++ M+G +R +R A K + Q Q T
Sbjct: 279 RERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPT 338
Query: 264 QGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQF 317
G Q + P TT +VG L P T + L +F +G +V + A + FV+
Sbjct: 339 HGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKM 398
Query: 318 ANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
A A+ LNG + G+ ++ SWG+
Sbjct: 399 DTHENAAMAICQLNGYNVNGRPLKCSWGK 427
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 43/118 (36%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------------------ 312
+PN ++VGGLDP VT+DILK +F G + VKI K
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTY 157
Query: 313 -------------------------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
GF+++ + AE+A+ LNG ++ IR++W
Sbjct: 158 VLYVYLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWA 215
>gi|209735818|gb|ACI68778.1| tRNA selenocysteine-associated protein 1 [Salmo salar]
gi|303668652|gb|ADM16309.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 301
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L+P+M+E++I FG GE V S ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P + F+LN AT+G ++ + P +++FVGDL +V D +L E F
Sbjct: 61 LRKVNGKALPGATPPRRFKLNRATFG---KQGESSPLYSLFVGDLTPEVDDGMLYEFFYN 117
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y S +G KVV D TG SKG GFV+F D+ Q ++ E G + ++P+R+ AA K
Sbjct: 118 RYPSCRGGKVVLD-GTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 175
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 29/208 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCLR 62
Query: 228 EMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG +T P R + +AT+ G QGE+ P ++FVG L P
Sbjct: 63 KVNGKALPGATPPRRF------------KLNRATF----GKQGESSPL-YSLFVGDLTPE 105
Query: 286 VTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQ 338
V D +L F +Y G++V K CGFVQF ++ + AL G LG +
Sbjct: 106 VDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSK 165
Query: 339 SIRLSWGRSPS-NKQSDQAQW--NGGGY 363
+RLS + + + QSD W +GGGY
Sbjct: 166 PLRLSLAANKTRHNQSDNRGWGSHGGGY 193
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGEL-VHVKIPAGKRCG------FVQFANRTCAEQAL 327
+T+++G L+P + ++ + FG GEL V V+I K G FV+ + AE+ L
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGGAAGYCFVELTDEATAERCL 61
Query: 328 SVLNGTQLGGQS--IRLSWGRSPSNKQSDQA 356
+NG L G + R R+ KQ + +
Sbjct: 62 RKVNGKALPGATPPRRFKLNRATFGKQGESS 92
>gi|432883111|ref|XP_004074210.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Oryzias
latipes]
Length = 305
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 11/199 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L +M+E +I F GE V+ ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P F+LN AT+G +Q+ GP F++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGANPPTRFKLNRATFG----KQEAGPMFSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAAT-- 246
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + ++P+R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALEECQGAMGLGSKPLRLSLAANNL 175
Query: 247 KKAATGQQYQKATYQNTQG 265
+ Q QK T+ ++ G
Sbjct: 176 RNKQPQQSEQKQTWPSSSG 194
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 52/252 (20%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLDSYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGAMGYCFVEMSDEATAERCLR 62
Query: 228 EMNGVLCSTRPMRIGPAATK--KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
++NG + P P K +A G+Q + ++FVG L P
Sbjct: 63 KING---KSLPGANPPTRFKLNRATFGKQEAGPMF---------------SLFVGDLTPE 104
Query: 286 VTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQ 338
V D +L F +Y G++V + K CGFVQF + ++AL G LG +
Sbjct: 105 VDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALEECQGAMGLGSK 164
Query: 339 SIRLSWG----RSPSNKQSDQAQ-WNGG-----------------GYY---GFAQGYEAY 373
+RLS R+ +QS+Q Q W GYY G+ Q Y
Sbjct: 165 PLRLSLAANNLRNKQPQQSEQKQTWPSSSGYSYDQYNQYQNQAYPGYYPSWGYDQTAAMY 224
Query: 374 GYAPPTQDPNMY 385
GY+ P D + Y
Sbjct: 225 GYSYPQYDYSQY 236
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 158/327 (48%), Gaps = 30/327 (9%)
Query: 43 PPV--GWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHT 97
PP+ G P P + Q +P + P S RS+++G++ + ++ + +F
Sbjct: 39 PPLFPGHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSI 98
Query: 98 GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG 157
G K+IR ++++F GFI++ A + + NG Q+ Q ++NWA
Sbjct: 99 GPVEGCKLIRKEKSSF----GFIDYYDRRYAALAILSLNGRQLYG--QPIKVNWAY--TS 150
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
R+D F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F
Sbjct: 151 TPREDTSGHFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFR 209
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQG----- 268
++ + ++ ++NG R +R ATK A G++ Q K N G
Sbjct: 210 NQQDAQSAINDLNGKWLGNRQIRCN-WATKGANAGEEKQILDTKVDLSNGSSESGKENPN 268
Query: 269 ----ENDPNNTTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTC 322
EN+P TT++VG L T + + F G + V++ K GFV+++
Sbjct: 269 EDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEE 328
Query: 323 AEQALSVLNGTQLGGQSIRLSWGRSPS 349
A A+ + NG +GG+ I+ SWG P+
Sbjct: 329 AALAIQMGNGQLIGGRQIKCSWGSKPT 355
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD VLQE F+++ V+G K++ + +GF+ + D ++
Sbjct: 76 SVYVGNIHLQVTDTVLQEVFQSI-GPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 130
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y ++T G + IFVG L P VT
Sbjct: 131 SLNGRQLYGQPIKVNWA----------YTSTPREDTSG--------HFNIFVGDLCPEVT 172
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 173 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 232
Query: 342 LSWGRSPSN 350
+W +N
Sbjct: 233 CNWATKGAN 241
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VTD +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 76 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 135
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
QL GQ I+++W + + ++ +N
Sbjct: 136 QLYGQPIKVNWAYTSTPREDTSGHFN 161
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + +T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 244 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 303
Query: 353 SDQAQW 358
D +QW
Sbjct: 304 VDYSQW 309
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 200
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 12/275 (4%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +FG GE S K+ R T + Y F+EF H A + N
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTT---DPYCFVEFCDHMTALNAITMMN 57
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQ----DDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ + + R++WAT G G + + D ++VGDL+ ++ + L+E F+ V+
Sbjct: 58 DKMLQN--RKMRVDWAT-GQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQ-VFG 113
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+ KVV D + +S+GYGFV F + + S++ MNG + ++ A K A T
Sbjct: 114 EISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTP 173
Query: 253 QQYQ-KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
+ + + N + P NTT+F GGL +T+++L F +G++ +KI K
Sbjct: 174 NETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKG 233
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F+++ ++ A QA+ L+ + L GQ IR SWG+
Sbjct: 234 YAFIKYTSKESACQAIVELHNSNLNGQMIRCSWGK 268
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++E + F GE KV+++ Q+ S GYGF+ FV AE +
Sbjct: 91 VYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAM 150
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPD-----------------FTIFVGDLAADV 178
NG + + + WAT + P+ T+F G L D+
Sbjct: 151 NGQWL--GRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFCGGLKQDI 208
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ +L ++F+ + ++ K+ + KGY F+++ + +++ E++
Sbjct: 209 TEEMLHKSFQP-HGQIEKIKIF------KEKGYAFIKYTSKESACQAIVELHN 254
>gi|427786393|gb|JAA58648.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 225
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 27/214 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ +L ++P+R+G A ++AA G Q+ Y+N
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVFYRN 219
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLN 331
FVG L V D +L F Q Y + K+ P G K GFV+F++ T ++AL +
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 GTQL-GGQSIRL 342
+ L G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 145/309 (46%), Gaps = 31/309 (10%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ AAER +QT NG ++ +E R+NWA ++D F IFVGDL+
Sbjct: 138 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNTTSKEDTSNHFHIFVGDLSN 195
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D +L + F A + SV A+V+ D TGRS+GYGFV F D + ++++ M+G +
Sbjct: 196 EVNDEILSQAF-AAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGS 254
Query: 237 RPMRIGPAATK--KAATGQQYQKATYQNTQGSQGEND----------------PN-NTTI 277
R +R A K + QQ +A G + PN TT+
Sbjct: 255 RAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILAQTPNWQTTV 314
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
+VG L P T + + +F +G +V + A + F++ + A A+ +NG + G
Sbjct: 315 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNG 374
Query: 338 QSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGT--Y 395
+ ++ SWG+ D+ GG+ QGY P P FP YG
Sbjct: 375 RPLKCSWGK-------DKTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTAYFPQYGAQYS 427
Query: 396 QQPGSYQQP 404
QPG+Y P
Sbjct: 428 GQPGNYGGP 436
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 46/214 (21%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + ++ F G +V+ + +T S GYGF+ F AE+ L +
Sbjct: 188 IFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSM 247
Query: 136 NGTQMPSTEQNFRLNWAT---------------------------------YGAGERRQD 162
+G + S + R NWA + E
Sbjct: 248 DGEWLGS--RAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASYEVILA 305
Query: 163 DGPDF--TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
P++ T++VG+L T + F+ + V ++ DR G+ F++
Sbjct: 306 QTPNWQTTVYVGNLTPYTTPNDVVPLFQN-FGFVVESRFQADR------GFAFIKMESHE 358
Query: 221 EQLRSMTEMNGVLCSTRPMRI--GPAATKKAATG 252
++ +MNG + RP++ G T AA G
Sbjct: 359 AAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAGG 392
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 24/304 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQD-------------DGPDFTIFVGDLAADVTD 180
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEITT 123
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 124 EDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 182
Query: 241 IGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A + +T Q + ++ P N T++ GG+ +TD +++ F +G
Sbjct: 183 TNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFG 242
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSD 354
+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 243 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVD 302
Query: 355 QAQW 358
+QW
Sbjct: 303 YSQW 306
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAAT---KKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+ ++ MNG + +++ A T +K T +Y A + + D ++ +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLR------DQDHFHV 112
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLN 331
FVG L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ +
Sbjct: 113 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 172
Query: 332 GTQLGGQSIRLSWG-RSPSNKQSDQ 355
G LGG+ IR +W R P +S Q
Sbjct: 173 GQWLGGRQIRTNWATRKPPAPKSTQ 197
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 26/329 (7%)
Query: 85 MEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE 144
+ E+ I +F G + K+I + N + Y F+EF H A L NG ++ E
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMNGRKIMGKE 58
Query: 145 QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
++NWAT + +++ D F +FVGDL+ ++T ++ F A + + A+VV D
Sbjct: 59 --VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISDARVVKDMA 114
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+ T Q +
Sbjct: 115 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSY 174
Query: 265 GSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
++ PNN T++ GG+ +T+ +++ F +G+++ +++ K FV+F++ A
Sbjct: 175 DEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESA 234
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY----------YGFAQGYEAY 373
A+ +NGT + G ++ WG+ + + Q N GY YG AQ Y
Sbjct: 235 AHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQQIGQY 294
Query: 374 GYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
PN + P YG Y QP S Q
Sbjct: 295 -------VPNGWQ--VPAYGVYGQPWSQQ 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 80 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 139
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 140 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL 197
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 198 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNG 243
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 25/299 (8%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 73
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D +L + F A +
Sbjct: 74 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSA-FG 129
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK---- 248
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 130 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSV 189
Query: 249 --------AATGQQYQKATYQN---TQGSQGENDPN-NTTIFVGGLDPSVTDDILKTVFG 296
ATG +Q + S + P+ N+T++VG L P T L +F
Sbjct: 190 AVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQ 249
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++ + Q
Sbjct: 250 SIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQ 308
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 19/308 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRSFLNKE--MKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAA 250
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +
Sbjct: 122 ISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRS 181
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
++ + N + ++ P N T++ GG +TD+++ F +G + +++ K
Sbjct: 182 ERPRHSNNSKPNYEEVYNQSSPTNCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKDK 241
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS---------PSNKQSDQAQWNGG 361
F++F + A A+ + T++ G ++ WG+ +N Q+ Q G
Sbjct: 242 GYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAG 301
Query: 362 GY-YGFAQ 368
Y YG+ Q
Sbjct: 302 QYAYGYGQ 309
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF-------- 167
V + AE + NG + S ++ R NW+T + P++
Sbjct: 145 VKKSEAEAAIAAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSS 202
Query: 168 ----TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
T++ G +TD ++ +TF + + +++ +V D KGY F++F +
Sbjct: 203 PTNCTVYCGGFTNGITDELINKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAAT 255
Query: 224 RSM-----TEMNGVLCST-------RPMRIGPAATKKA 249
++ TE+NG + P +GP A +A
Sbjct: 256 HAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQA 293
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQAL 327
+ N T++VG LD SV++++L +F Q G + KI P FV+F N CA AL
Sbjct: 4 ESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNK 351
+ +N + ++++W SP N+
Sbjct: 64 AAMNKRSFLNKEMKVNWATSPGNQ 87
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 14/301 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + +T ++ Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 67 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 125 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 184 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 244 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 303
Query: 363 Y 363
Y
Sbjct: 304 Y 304
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 16/287 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D ++L++G+L + E I +F G S K+I + N + Y F+EF H A
Sbjct: 4 DLPKTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAA 61
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTD 180
L NG ++ E ++NWAT + +++ + F +FVGDL+ +++
Sbjct: 62 SLAAINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEIST 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 120 DDIKAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIR 178
Query: 241 IGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A ++ Q T + ++ P+N T++ GG+ +++ +++ F +G
Sbjct: 179 TNWATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFG 238
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ V++ K FV+F++ A A+ +NGT + G ++ WG+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 158/310 (50%), Gaps = 19/310 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 KTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNTQGSQGEN--DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q + + + + N P N T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 SVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-SPSNKQSDQ-------AQWNGGGY 363
F++F++ A A+ +NGT + G ++ WG+ SP ++ Q QWN
Sbjct: 241 YSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWN--QM 298
Query: 364 YGFAQGYEAY 373
YG Q Y Y
Sbjct: 299 YGNPQQYGQY 308
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQI-GPCKSCKMITEHTS--NDPYCFVEFFEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 DAAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T D ++ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 102 DLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQW 161
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 162 LGGRQIRTNWATRKPPAPKSVQ 183
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 157/339 (46%), Gaps = 30/339 (8%)
Query: 28 QQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEE 87
QQ Q H P V + P P P +S R +++G++ + +
Sbjct: 2 QQQALLQHHHMYHHPALVASAMSQMEPILGGNLPPAFDPSSS---CRRVYVGNIHVNVTD 58
Query: 88 SYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNF 147
+A +F G K+IR +++ YGF+++ ++A + T +G Q+ Q
Sbjct: 59 KLLAEVFATAGPLAGCKLIRKDKSS----YGFVDYHDQSSAALAIMTLHGRQLYG--QAL 112
Query: 148 RLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
++NWA YG +R+D F +FVGDL+ +V D L F +V+ S A+V+ D TGR
Sbjct: 113 KVNWA-YG-NSQREDTSGHFHVFVGDLSPEVIDANLFACF-SVFPSCSNARVMWDHKTGR 169
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN----T 263
SKGYGFV F ++ E ++ ++ G R +R ATK + + Q + QN T
Sbjct: 170 SKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIRCN-WATKGVESNEDKQNSDNQNAVVLT 228
Query: 264 QGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGK 310
GS EN+P TT++VG L VT L F G V V++ K
Sbjct: 229 NGSSEGGQESTNEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDK 288
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
GFV++ A A+ NG + G+ ++ SWG P+
Sbjct: 289 GFGFVRYNTHEEAASAIQTGNGKIVCGKPVKCSWGSKPT 327
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSMT 227
++VG++ +VTD +L E F A + G K++ D+++ YGFV + D+S ++
Sbjct: 47 VYVGNIHVNVTDKLLAEVF-ATAGPLAGCKLIRKDKSS-----YGFVDYHDQSSAALAIM 100
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++G + +++ A Y N SQ E+ + +FVG L P V
Sbjct: 101 TLHGRQLYGQALKVNWA---------------YGN---SQREDTSGHFHVFVGDLSPEVI 142
Query: 288 DDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + + ++ K GFV F N+ A+ A++ L G LG + IR
Sbjct: 143 DANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTGKWLGNRQIR 202
Query: 342 LSWGRSPSNKQSDQ 355
+W D+
Sbjct: 203 CNWATKGVESNEDK 216
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 271 DPNNTT--IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQA 326
DP+++ ++VG + +VTD +L VF G L K+ + GFV + +++ A A
Sbjct: 39 DPSSSCRRVYVGNIHVNVTDKLLAEVFATAGPLAGCKLIRKDKSSYGFVDYHDQSSAALA 98
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSNKQ 352
+ L+G QL GQ+++++W S ++
Sbjct: 99 IMTLHGRQLYGQALKVNWAYGNSQRE 124
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 172/383 (44%), Gaps = 56/383 (14%)
Query: 53 PPPSQQTQPYGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
P P+ V+ +S++ R L++G+L P + E + IF G K+I ++
Sbjct: 23 PAPASDHGCLSVSTCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR- 81
Query: 111 TNFSEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF 167
N+ G YGF+E++ AAE LQT NG ++ TE R+NWA Y + ++D +
Sbjct: 82 -NYQHGGQNYGFVEYMDMRAAETALQTLNGRKIFDTE--IRVNWA-YQGTQNKEDTSNHY 137
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+FVGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++
Sbjct: 138 HVFVGDLSPEVNDEVLAKAF-AAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIA 196
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATY--------------------QNTQGS- 266
MNG +R +R+ A K + G N QG
Sbjct: 197 TMNGEWLGSRAIRVNWANQKTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGP 256
Query: 267 ------QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANR 320
+ NTT++VG L P T L +F G L +++ A + FV+
Sbjct: 257 LSYESVVSQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTH 316
Query: 321 TCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQ 380
A A+ L G + G+ I+ SWG+ S + G A G A
Sbjct: 317 ENAAMAIVQLQGQLVHGRPIKCSWGKDRSAADTGAP----GSMITPATGAGA-------- 364
Query: 381 DPNMYYGGFPGYGTYQQPGSYQQ 403
YGG P YG QP +Y Q
Sbjct: 365 -----YGGVPMYGM-PQPNAYAQ 381
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 28/349 (8%)
Query: 46 GWTPQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
G P P + Q +P + P S RS+++G++ + ++ + +F G
Sbjct: 44 GHHPHPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEG 103
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K+IR ++++F GFI++ A + + NG Q+ Q ++NWA R+D
Sbjct: 104 CKLIRKEKSSF----GFIDYYDRRYAALAILSLNGRQLYG--QPIKVNWAY--TSTPRED 155
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F ++ +
Sbjct: 156 TSGHFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDA 214
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQGENDPNN---- 274
++ ++NG R +R ATK A G++ Q K N G+ +PN+
Sbjct: 215 QSAINDLNGKWLGNRQIRCN-WATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPE 273
Query: 275 -----TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQAL 327
TT++VG L T + + F G + V++ K GFV+++ A A+
Sbjct: 274 NNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAI 333
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYA 376
+ NG +GG+ I+ SWG P+ + + F+ G A+ A
Sbjct: 334 QMGNGQLIGGRQIKCSWGSKPTPQGTASLPLPPPALAPFSTGVSAHRLA 382
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 16/287 (5%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAER 130
D ++L++G+L + E I +F G S K+I + N + Y F+EF H A
Sbjct: 4 DLPKTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGN--DPYCFVEFFEHRHAAA 61
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPD----------FTIFVGDLAADVTD 180
L NG ++ E ++NWAT + +++ + F +FVGDL+ +++
Sbjct: 62 SLAAINGRKILGKE--VKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEIST 119
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 120 DDIKAAF-APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIR 178
Query: 241 IGPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K A ++ Q T + ++ P+N T++ GG+ +++ +++ F +G
Sbjct: 179 TNWATRKPPAPKSTFESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLSEQLMRQTFSPFG 238
Query: 300 ELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ V++ K FV+F++ A A+ +NGT + G ++ WG+
Sbjct: 239 QIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 144/289 (49%), Gaps = 12/289 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAM 149
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 150 NGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKIS 205
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 206 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 265
Query: 256 QKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K F
Sbjct: 266 ENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 325
Query: 315 VQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
V+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 326 VRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 374
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 152/308 (49%), Gaps = 19/308 (6%)
Query: 42 PPPVGWTPQPVPP---PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTG 98
PP V Q PP P++ T+P P + +S+ + + ++E + IF G
Sbjct: 12 PPRVPQLYQQRPPQQNPTETTEP----PIPINANSKSVHVSGIHESVDEILLGRIFSIVG 67
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE 158
VS K++R+K + GYGF+EFV A +G + E ++NW+ Y A
Sbjct: 68 HVVSCKIMRDKSGTHA-GYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKVNWS-YTA-- 121
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
+Q++ + IFVG L +V D +L +TF+ + V A+V+ TG+SKGYGFV F
Sbjct: 122 -QQENQGSYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSKGYGFVTFIR 179
Query: 219 ESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
+ + +M MNG R +++ + A+ +Q K +Y E N T++
Sbjct: 180 KEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEINN---ETSIQNCTVY 235
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
+G + +V D LK + +YG + V++ K F++F+ A A+ + NG + G
Sbjct: 236 IGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGS 295
Query: 339 SIRLSWGR 346
++R SWGR
Sbjct: 296 TLRCSWGR 303
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++ V + V + +L F ++ V K++ D++ G GYGFV F D + +
Sbjct: 44 SVHVSGIHESVDEILLGRIF-SIVGHVVSCKIMRDKS-GTHAGYGFVEFVDSTTARFAKD 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
M+G + R +++ + T QQ + +Y+ IFVGGL P V
Sbjct: 102 NMDGRVVYGRELKVNWSYT-----AQQENQGSYK---------------IFVGGLQPEVN 141
Query: 288 DDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
DD+L F ++G + ++ K GFV F + AE A+ ++NG +L G++I+
Sbjct: 142 DDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIK 201
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFP 390
++W S +++Q + + Y+ Q+ +Y G P
Sbjct: 202 VNWVTSNIASKTEQPK----------RSYDEINNETSIQNCTVYIGNIP 240
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 158/317 (49%), Gaps = 15/317 (4%)
Query: 30 SQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESY 89
++Q ++Q P P + +P S +T + +A+S +S+ + + ++E
Sbjct: 2 TRQYDSRYQYPPRAPQLYQQRPPQQSSTETTESSLPINANS---KSVHVSGIHESVDEIL 58
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ IF G VS K++R+K + GYGF+EFV A +G + E ++
Sbjct: 59 LGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKV 115
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
NW+ Y A +Q++ ++ IFVG L +V D +L +TF+ + V A+V+ TG+SK
Sbjct: 116 NWS-YTA---QQENQGNYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSK 170
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV F + + +M MNG R +++ + A+ +Q K +Y E
Sbjct: 171 GYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEINN---E 226
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
N T+++G + +V D LK + +YG + V++ K F++F+ A A+ +
Sbjct: 227 TSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILM 286
Query: 330 LNGTQLGGQSIRLSWGR 346
NG + G ++R SWGR
Sbjct: 287 CNGKIINGSTLRCSWGR 303
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++ V + V + +L F ++ V K++ D++ G GYGFV F D + +
Sbjct: 44 SVHVSGIHESVDEILLGRIF-SIVGHVVSCKIMRDKS-GVHAGYGFVEFVDSTTARFAKD 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
M+G + R +++ + T + Q QG N IFVGGL P V
Sbjct: 102 NMDGRVVYGRELKVNWSYTAQ------------QENQG--------NYKIFVGGLQPEVN 141
Query: 288 DDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
DD+L F ++G + ++ K GFV F + AE A+ ++NG +L G++I+
Sbjct: 142 DDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIK 201
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFP 390
++W S +++Q + + Y+ +Q+ +Y G P
Sbjct: 202 VNWVTSNIASKTEQPK----------RSYDEINNETSSQNCTVYIGNIP 240
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 12/288 (4%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I +N + Y F+EF H A L N
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 60
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 61 GRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 116
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A +
Sbjct: 117 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 176
Query: 257 KATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K FV
Sbjct: 177 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 236
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 237 RFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 90 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 149
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 150 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 207
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 208 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 253
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 170/353 (48%), Gaps = 40/353 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIL 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR------SPSNKQSDQ- 355
+++ K F++F + A A+ +NGT + G ++ WG+ +P +Q +Q
Sbjct: 242 EIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQQNQI 301
Query: 356 ------AQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPGSYQ 402
QW G +YG AQ Y PN + P YG Y QP S Q
Sbjct: 302 GYPPAYGQW--GQWYGNAQQIGQY-------VPNGWQ--VPAYGMYGQPWSQQ 343
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 163/355 (45%), Gaps = 56/355 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 72
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 73 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAF-AAFG 128
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----- 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 129 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 188
Query: 248 ----------KAATGQQYQKATYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDI 290
N QG S + P N+T++VG L P T
Sbjct: 189 PPRAGNGGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQQTPAYNSTVYVGNLVPYATQAD 248
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L +F G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 249 LIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKD--- 305
Query: 351 KQSDQAQWNGGG--------------YYGFAQ-------GYEAYGYAPPTQDPNM 384
++D GG YG Q G+ AYG AP + P M
Sbjct: 306 -RADGGALTTGGMSPTPAAAPYGNMPMYGMPQPNSYGQYGFGAYGGAPGSAAPGM 359
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 10 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 69
Query: 325 QALSVLNGTQLGGQSIRLSW 344
AL LNG ++ IR++W
Sbjct: 70 TALQTLNGRKIFDTEIRVNW 89
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 145/295 (49%), Gaps = 30/295 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 73
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D F +FVGDL+ +V D VL + F A +
Sbjct: 74 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSA-FG 129
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA-- 250
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 130 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 189
Query: 251 -TGQQYQKATYQNTQGSQGENDPN------------------NTTIFVGGLDPSVTDDIL 291
G + + + G N NTT++VG L P T L
Sbjct: 190 PVGVRSGSMSAGSGGGGGAPAPMNFSGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADL 249
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F G L +++ A + FV+ A A+ L G + G+ I+ SWG+
Sbjct: 250 IPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 304
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 11 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 70
Query: 325 QALSVLNGTQLGGQSIRLSW 344
AL LNG ++ IR++W
Sbjct: 71 TALQTLNGRKIFDTEIRVNW 90
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 37/348 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 304
Query: 353 SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
D +QW G + Y P Q G+ P YG Y QP
Sbjct: 305 VDYSQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 165 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 201
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR S+ Y FIE+ +H +A+ L
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREAS---SDPYAFIEYANHQSAQTALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 65 AMNKRLFLKKE--IKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +S+GY FV F ++E ++ MNG +R +R + K A +
Sbjct: 122 ISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRE 181
Query: 254 QYQKATYQNTQGSQ---GENDPNNTTIFVGGLDPSVTDDIL-KTVFGQYGELVHVKIPAG 309
+ T G + P NTT++ GG + +D+L FG +G++ V++
Sbjct: 182 NIKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD 241
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F N+ A +A+ + +++ G +++ WG+
Sbjct: 242 KGYAFIKFNNKESAARAIEGTHNSEIQGYAVKCYWGK 278
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S GY F+ F
Sbjct: 85 GNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY------------------GAGERRQDDG 164
V A AE +Q NG + S ++ R NW+T G E + G
Sbjct: 145 VKKAEAENAIQMMNGQWLGS--RSIRTNWSTRKPPAPRENIKGIKSGKTPGFEEIYNNTG 202
Query: 165 P-DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
P + T++ G A+ + +L ++ ++ +V D KGY F++F ++
Sbjct: 203 PTNTTVYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD------KGYAFIKFNNKESAA 256
Query: 224 RSM 226
R++
Sbjct: 257 RAI 259
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LD SVT+D+L +FGQ G + KI + F+++AN A+ AL+ +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMNK 68
Query: 333 TQLGGQSIRLSWGRSPSNK-QSDQAQ 357
+ I+++W SP N+ ++D +Q
Sbjct: 69 RLFLKKEIKVNWATSPGNQPKTDTSQ 94
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 37/348 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 125
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 126 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 185 IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 244
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 245 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 304
Query: 353 SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
D +QW G + Y P Q G+ P YG Y QP
Sbjct: 305 VDYSQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 105 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 164
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 165 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 201
>gi|291228731|ref|XP_002734335.1| PREDICTED: tRNA selenocysteine associated protein 1-like
[Saccoglossus kowalevskii]
Length = 303
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
S+W+GDL+P+M+E+++ F GE V + K+IRNK T +GY F++F S A+ +L+
Sbjct: 4 SVWMGDLEPYMDEAFVIEAFASVGEKVLNVKIIRNKYTRIPQGYCFVDFGSDEIAKAILR 63
Query: 134 TFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+NG +P + + F+LN+A YG + P+F++FVG+L +V + L E F Y
Sbjct: 64 KYNGKPLPGSNNSKRFKLNFAAYGQSYQ----SPEFSLFVGELTPEVDNCALHEFFAKRY 119
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKAA 250
+ K A VV D G S+GYGFVRF +E +Q R++ EMN V + +++ A K+
Sbjct: 120 YTCKAANVVLD-PMGHSRGYGFVRFSNEEDQQRALIEMNQVTGLGGKSIKVALATPKRPI 178
Query: 251 TGQQ 254
T Q
Sbjct: 179 TAVQ 182
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 21/339 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y-YGFAQGYEAYGYAPPTQD--PNMYYGGFPGYGTYQQP 398
Y + Q + YG A PN + P YG Y QP
Sbjct: 302 YPQAYGQWGQWYGNAQQIGQYMPNGWQ--VPAYGMYGQP 338
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 158/317 (49%), Gaps = 15/317 (4%)
Query: 30 SQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESY 89
++Q ++Q P P + +P S +T + +A+S +S+ + + ++E
Sbjct: 2 TRQYDSRYQYPPRTPQLYQQRPPQQNSTETTDSSLPINANS---KSVHVSGIHESVDEIL 58
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ IF G VS K++R+K + GYGF+EFV A +G + E ++
Sbjct: 59 LGRIFSIVGHVVSCKIMRDK-SGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRE--LKV 115
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
NW+ Y A +Q++ ++ IFVG L +V D +L +TF+ + V A+V+ TG+SK
Sbjct: 116 NWS-YTA---QQENQGNYKIFVGGLQPEVNDDLLYKTFQK-FGRVTDARVLKFTQTGKSK 170
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV F + + +M MNG R +++ + A+ +Q K +Y E
Sbjct: 171 GYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ-PKRSYDEINN---E 226
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSV 329
N T+++G + +V D LK + +YG + V++ K F++F+ A A+ +
Sbjct: 227 TSSQNCTVYIGNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILM 286
Query: 330 LNGTQLGGQSIRLSWGR 346
NG + G ++R SWGR
Sbjct: 287 CNGKIINGSTLRCSWGR 303
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++ V + V + +L F ++ V K++ D++ G GYGFV F D + +
Sbjct: 44 SVHVSGIHESVDEILLGRIF-SIVGHVVSCKIMRDKS-GVHAGYGFVEFVDSTTARFAKD 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
M+G + R +++ + T + Q QG N IFVGGL P V
Sbjct: 102 NMDGRVVYGRELKVNWSYTAQ------------QENQG--------NYKIFVGGLQPEVN 141
Query: 288 DDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
DD+L F ++G + ++ K GFV F + AE A+ ++NG +L G++I+
Sbjct: 142 DDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIK 201
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFP 390
++W S +++Q + + Y+ +Q+ +Y G P
Sbjct: 202 VNWVTSNIASKTEQPK----------RSYDEINNETSSQNCTVYIGNIP 240
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 145/284 (51%), Gaps = 19/284 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-APFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAP--- 177
Query: 254 QYQKATYQNTQGSQ-------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
K T + T Q ++ P+N T++ GG+ +T+ I++ F +G+++ +++
Sbjct: 178 ---KTTSETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRV 234
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K FV+F + A A+ +NGT + G ++ WG+ ++
Sbjct: 235 FPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD P T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 3 DDQPK-TLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNG----------------RKILGKEV-KVNWATTPTSQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQL 335
L P +T D +K F +G++ ++ K GFV F N+ AE A+ + G L
Sbjct: 102 LSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Query: 336 GGQSIRLSWG-RSPSNKQSDQ 355
GG+ IR +W R P+ K + +
Sbjct: 162 GGRQIRTNWATRKPAPKTTSE 182
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAE 324
+D T++VG L VT+ ++ +FGQ G K+ AG C FV+F A
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
++ +NG ++ G+ ++++W +P++++ D
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQKKD 90
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 164/347 (47%), Gaps = 49/347 (14%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 70
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 71 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSA-FG 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----- 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 127 TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAP 186
Query: 248 ------------KAATGQQYQKATYQ----NTQGSQGENDPNNTTIFVGGLDPSVTDDIL 291
TG +Q + + + N+T++VG L P T L
Sbjct: 187 PTTTASSPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADL 246
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+F G L +++ A + FV+ A A+ L G + G+ I+ SWG+ ++
Sbjct: 247 IPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADG 306
Query: 352 QSDQAQWNGGG-----YYGFAQ--GYEAYGYAPPTQDPNMYYGGFPG 391
+ Q GG YG Q Y YG+ Y GFPG
Sbjct: 307 GTAQP----GGPSPQPMYGIPQPTSYGQYGFGG--------YAGFPG 341
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 8 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 67
Query: 325 QALSVLNGTQLGGQSIRLSW 344
AL LNG ++ IR++W
Sbjct: 68 TALQTLNGRKIFDTEIRVNW 87
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 32/304 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L + E + IF TG + K+I +K YGF+E+ AA+R +
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAADRAMA 134
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 135 TLNGRRVHQSE--IRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSA-FGS 191
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F D + ++++ M+G +R +R A K +
Sbjct: 192 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMA 251
Query: 254 Q----------------------YQKATYQNTQGSQGENDPN-NTTIFVGGLDPSVTDDI 290
Q + A+Y+ PN TT +VG L P T
Sbjct: 252 QQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQT----PNWQTTCYVGNLTPYTTHTD 307
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS- 349
+ +F +G +V + A + F++ A A+ +NG + G+ ++ SWG+ +
Sbjct: 308 VVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 367
Query: 350 NKQS 353
N QS
Sbjct: 368 NSQS 371
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 158/330 (47%), Gaps = 24/330 (7%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I +N + Y F+EF H A L N
Sbjct: 114 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 171
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 172 GRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 227
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A +
Sbjct: 228 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQE 287
Query: 257 KATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K FV
Sbjct: 288 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 347
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGR-----SPSNKQSDQAQWNGGGYYGFAQGY 370
+F+ A A+ +NGT + G ++ WG+ + + +Q D +QW G
Sbjct: 348 RFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW----------GQ 397
Query: 371 EAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
+ Y P Q G+ P YG Y QP
Sbjct: 398 WSQVYGNPQQYGQYMANGWQVPPYGVYGQP 427
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 201 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 260
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 261 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 318
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 319 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 364
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 144/278 (51%), Gaps = 7/278 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-APFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA-ATG 252
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A T
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ + + ++ P+N T++ GG+ +T+ I++ F +G+++ +++ K
Sbjct: 181 NESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
FV+F + A A+ +NGT + G ++ WG+ ++
Sbjct: 241 SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTD 278
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNG----------------RKILGKEV-KVNWATTPTSQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQL 335
L P +T D +K F +G++ ++ K GFV F N+ AE A+ + G L
Sbjct: 102 LSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Query: 336 GGQSIRLSWG-RSPSNKQSDQA 356
GG+ IR +W R P+ K ++++
Sbjct: 162 GGRQIRTNWATRKPAPKTTNES 183
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 153/287 (53%), Gaps = 14/287 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E+ I +F G S K+I + N + Y F+EF + A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN--DPYCFVEFYENRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++ ++NWA+ + +++ D F +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKILG--KDMKVNWASTPSSQKK-DTSNHFHVFVGDLSPEISTDDVRAAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ A+VV D TG+SKGYGF+ F ++ + ++ +MNG R +R P+A K
Sbjct: 123 ISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
G + +Y+ ++ P+N T++ GG+ ++D +++ F +G+++ +++
Sbjct: 183 NNEGASSKHLSYEEVLN---QSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFP 239
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
K FV+F + A A+ +NGT + G +++ WG+ ++ +S Q
Sbjct: 240 EKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQ 286
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 25/306 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI--------RNKQTNFS-------EGYG 118
R+L++G+L + E I +F G S K+I R FS + Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 244 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 303
Query: 353 SDQAQW 358
D +QW
Sbjct: 304 VDYSQW 309
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T++ +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSSRRVNSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 200
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 143/302 (47%), Gaps = 22/302 (7%)
Query: 68 ASSDGI--RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
A D I R+L++G+L E+ + ++F G V K+I + + S Y FI + +H
Sbjct: 39 AKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSH-YCFITYETH 97
Query: 126 AAAERVLQTFNGT---QMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYV 182
A+R L NG +MP ++NWAT G ++ D D IFVGDLA ++T
Sbjct: 98 VGAQRALAAMNGRDVYKMP-----LKVNWATRPDGIKK-DTSKDHHIFVGDLAQELTTLD 151
Query: 183 LQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
LQ F + + A+VV D T RSKGYGFV F + ++TEMN R +R
Sbjct: 152 LQNEFEK-FGKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTN 210
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGEL 301
A ++K T + + +NTT++VGG+ V T +L+ F ++G +
Sbjct: 211 WATSRK------LPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHTQQVLQASFSRFGVV 264
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGG 361
V+ + GFV+ A A+ +NG + G +++ WG+ +D G
Sbjct: 265 EEVR--TFETFGFVKMQTHQAATNAICEMNGASISGCTVKCRWGKDDHKSSNDGNHQYGH 322
Query: 362 GY 363
Y
Sbjct: 323 NY 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T+P G+ D S D +++GDL + + + F G+ +V+R+ QTN S+GYG
Sbjct: 123 TRPDGIKKDTSKD--HHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYG 180
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG-------AGERRQDDGPDF---T 168
F+ F+ +AE + N + E R NWAT + F T
Sbjct: 181 FVAFLKKESAEMAITEMNNKSICGRE--VRTNWATSRKLPPPTVIDPHKVAQASSFSNTT 238
Query: 169 IFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++VG + DV T VLQ +F VV + T + +GFV+ ++
Sbjct: 239 VYVGGITKDVHTQQVLQASFSRF-------GVVEEVRTFET--FGFVKMQTHQAATNAIC 289
Query: 228 EMNGVLCS--TRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTT 276
EMNG S T R G K + G Y+ GSQ + +NTT
Sbjct: 290 EMNGASISGCTVKCRWGKDDHKSSNDGNHQYGHNYKEANGSQ---NSSNTT 337
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 167/343 (48%), Gaps = 21/343 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K F++F++ A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y-YGFAQGYEAYGYAPPTQD--PNMYYGGFPGYGTYQQPGSYQ 402
Y + Q + YG A PN + P YG Y QP S Q
Sbjct: 302 YPPAYGQWGQWYGNAQQIGQYVPNGWQ--VPAYGMYGQPWSQQ 342
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 139/274 (50%), Gaps = 7/274 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYEHRHAAASLA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAF-GPFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKT 180
Query: 254 QYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ + Q ++ P+N T++ GG+ +T+ +++ F +G ++ +++ K
Sbjct: 181 TYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+F + A A+ +NG+ + G ++ WG+
Sbjct: 241 SFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 274
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 2 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYEHR 57
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 58 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T D +K FG +G + ++ K GFV F N+ AE A+ + G
Sbjct: 101 DLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 335 LGGQSIRLSWG-RSP 348
LGG+ IR +W R P
Sbjct: 161 LGGRQIRTNWATRKP 175
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAEQALSVL 330
T++VG L VT+ ++ VF Q G K+ AG C FV+F A +L+ +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYEHRHAAASLAAM 66
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSDQA 356
NG ++ G+ ++++W +P++++ D +
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKDTS 92
>gi|209737894|gb|ACI69816.1| tRNA selenocysteine-associated protein 1 SECp43 [Salmo salar]
Length = 271
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 137/249 (55%), Gaps = 26/249 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNF-SEGYGFIEFVSHAAAER 130
+ +LW+G+L+P+M+E++I FG GE V S ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAER 60
Query: 131 VLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L+ NG +P + F+LN AT+G ++ + P +++FVGDL +V D +L E F
Sbjct: 61 CLRKVNGKALPGATPPRRFKLNRATFG---KQGESSPLYSLFVGDLTPEVDDGMLYEFFY 117
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y S +G KVV D TG SKG GFV+F D+ Q ++ E G + ++P+R+ AA K
Sbjct: 118 NRYPSCRGGKVVLD-GTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGSKPLRLSLAANK 176
Query: 248 K----------AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL-DPSVTDDILKT--V 294
+ G Y+ Y TQ + EN+ + GL DP+ D+L+ +
Sbjct: 177 TRHNQSDNRGWGSHGGGYRHNQYDYTQNTAQENE----AVEEDGLEDPNPELDVLEANRM 232
Query: 295 FGQYGELVH 303
F ++ E ++
Sbjct: 233 FMEHSEELY 241
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 30/209 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR-SKGYGFVRFGDESEQLRSM 226
T+++G+L + + + F + V +++ ++ TGR + GY FV DE+ R +
Sbjct: 3 TLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERCL 62
Query: 227 TEMNGVLC--STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++NG +T P R + +AT+ G QGE+ P ++FVG L P
Sbjct: 63 RKVNGKALPGATPPRRF------------KLNRATF----GKQGESSPL-YSLFVGDLTP 105
Query: 285 SVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LGG 337
V D +L F +Y G++V K CGFVQF ++ + AL G LG
Sbjct: 106 EVDDGMLYEFFYNRYPSCRGGKVVLDGTGNSKGCGFVQFPDQRLQKLALEECQGAVGLGS 165
Query: 338 QSIRLSWGRSPS-NKQSDQAQW--NGGGY 363
+ +RLS + + + QSD W +GGGY
Sbjct: 166 KPLRLSLAANKTRHNQSDNRGWGSHGGGY 194
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGEL-VHVKIPAGKRCG-------FVQFANRTCAEQA 326
+T+++G L+P + ++ + FG GEL V V+I K G FV+ + AE+
Sbjct: 2 STLWMGNLEPYMDENFITRAFGTMGELVVSVRIIRNKMTGRGAAGYCFVELTDEATAERC 61
Query: 327 LSVLNGTQLGGQS--IRLSWGRSPSNKQSDQA 356
L +NG L G + R R+ KQ + +
Sbjct: 62 LRKVNGKALPGATPPRRFKLNRATFGKQGESS 93
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 36/348 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
R+L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 68
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ F +FVGDL+ ++
Sbjct: 69 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKKILPVNHFHVFVGDLSPEI 126
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 127 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 185
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 186 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 245
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQ 352
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q
Sbjct: 246 FGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQ 305
Query: 353 SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
D +QW G + Y P Q G+ P YG Y QP
Sbjct: 306 VDYSQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 41/218 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 61
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 62 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 104
Query: 266 SQGENDP-NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFA 318
SQ + P N+ +FVG L P +T + +K+ F +G++ ++ K GFV F
Sbjct: 105 SQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY 164
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
N+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 165 NKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 202
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 153/287 (53%), Gaps = 14/287 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E+ I +F G S K+I + N + Y F+EF + A L
Sbjct: 9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGN--DPYCFVEFYENRHAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ ++ ++NWA+ + +++ D F +FVGDL+ +++ ++ F A +
Sbjct: 67 AMNGRKI--LGKDMKVNWASTPSSQKK-DTSNHFHVFVGDLSPEISTDDVRAAF-APFGK 122
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKK 248
+ A+VV D TG+SKGYGF+ F ++ + ++ +MNG R +R P+A K
Sbjct: 123 ISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
G + +Y+ ++ P+N T++ GG+ ++D +++ F +G+++ +++
Sbjct: 183 NNEGASSKHLSYEEVLN---QSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVFP 239
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
K FV+F + A A+ +NGT + G +++ WG+ ++ +S Q
Sbjct: 240 EKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQ 286
>gi|291228735|ref|XP_002734331.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 334
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 5/178 (2%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GD++P+ +E++I F H+GE + K+++NK T Y F++F AAAERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P++ + F+LN+A YG + +F++FVG+L+ +V DY L F Y
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPNFNRKEFSLFVGELSPEVDDYALYNFFSRRY 123
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
S+KGAKV+ D G S+G+GFVRFG E EQ R++ EM N R +R+ A KK
Sbjct: 124 PSIKGAKVIMD-NAGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGRSLRVSIATPKK 180
>gi|427778057|gb|JAA54480.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 257
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 117/215 (54%), Gaps = 27/215 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNT 263
+ +L ++P+R+G A ++AA G Q+ Q++
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVXXQHS 220
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLN 331
FVG L V D +L F Q Y + K+ P G K GFV+F++ T ++AL +
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 GTQL-GGQSIRL 342
+ L G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL ++T ++ F A +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLNPEITTEDVRVAF-APFGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M+G R +R A K A
Sbjct: 122 ISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPKS 181
Query: 254 QYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+ Q ++ P N T++ GG+ +++ +++ F +G+++ V++ K
Sbjct: 182 TQDNGSKQLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKGY 241
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-----SPSNKQSDQAQW 358
F++F++ A A+ +NGT + G ++ WG+ + S +Q D +QW
Sbjct: 242 SFIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKESPDMAKSPQQVDYSQW 292
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSN--DPYCFVEFFEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL D++ ++ F +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLNPDISTEDVRAAFTP-FGK 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TTG+SKGYGFV F ++ + ++ M G R +R AT+K +
Sbjct: 122 ISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTN-WATRKPPAPK 180
Query: 254 QYQKATYQNTQGSQ--GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
Q + + + + ++ P N T++ GG+ +++ +++ F +G+++ +++ K
Sbjct: 181 SLQDSVSKQLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKG 240
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
F++F++ A A+ +NGT + G +++ WG+ ++ +Q + +QW
Sbjct: 241 YSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKESTDMAKNPQQFEYSQW 292
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F + +
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQI-GPCKSCKMITEHTS--NDPYCFVEFFEHRD 59
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 60 AAAALAAMNG----------------RKILGKEV-KVNWATTPSSQKKDTSNHFHVFVGD 102
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQL 335
L+P ++ + ++ F +G++ ++ K GFV F N+ AE A+ + G L
Sbjct: 103 LNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWL 162
Query: 336 GGQSIRLSWG-RSPSNKQSDQ 355
GG+ IR +W R P +S Q
Sbjct: 163 GGRQIRTNWATRKPPAPKSLQ 183
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG----FVQFANRTCAE 324
+++ + T++VG L VT+ ++ +F Q G K+ FV+F A
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
AL+ +NG ++ G+ ++++W +PS+++ D
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQKKD 91
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 66 AMNGRKILGKE--VKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDI 123
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 124 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 182
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 183 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 242
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQ 357
+++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D +Q
Sbjct: 243 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQ 302
Query: 358 W 358
W
Sbjct: 303 W 303
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAAT---KKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+ ++ MNG + +++ A T +K T +Y + + + +
Sbjct: 59 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSY---------HFHV 109
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLN 331
FVG L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ +
Sbjct: 110 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 169
Query: 332 GTQLGGQSIRLSWG-RSPSNKQSDQ 355
G LGG+ IR +W R P +S Q
Sbjct: 170 GQWLGGRQIRTNWATRKPPAPKSTQ 194
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 26/322 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---------------YG 118
R+L++G+L + E I +F G S K+I + + G Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTNNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +T+ +++ FG
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIGSGLTEQLMRQTFGV 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-----SPSNKQ 352
+G+++ +++ K F++F+ A A+ +NGT + G ++ WG+ + + +Q
Sbjct: 244 FGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETPDMTKNFQQ 303
Query: 353 SDQAQWN-GGGYYGFAQGYEAY 373
D +QW G YG Q Y Y
Sbjct: 304 VDYSQWGQWGQMYGSPQQYGQY 325
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T++T R G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQTDSRRVGASVSFPVLPN 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TNNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 200
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 21/339 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y-YGFAQGYEAYGYAPPTQD--PNMYYGGFPGYGTYQQP 398
Y + Q + YG A PN + P YG Y QP
Sbjct: 302 YPQAYGQWGQWYGNAQQIGQYMPNGWQ--VPAYGMYGQP 338
>gi|427778771|gb|JAA54837.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 217
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 27/212 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
+ +L ++P+R+G A ++AA G Q+ Y
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGPGGQRVXY 217
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLN 331
FVG L V D +L F Q Y + K+ P G K GFV+F++ T ++AL +
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 GTQL-GGQSIRL 342
+ L G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQL 335
T++VGGLDP+V++D L+ F +YG++ VKIP GK+CGFVQF +RT AE+AL LNG+ +
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 336 GGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMY---YGGFP 390
G Q++RLSWGRSPS+KQS D YYG Y YGYA P PNMY YG +P
Sbjct: 61 GKQAVRLSWGRSPSHKQSRADSGSRRNNMYYG-TPFYGGYGYASPVPHPNMYAAAYGAYP 119
Query: 391 GYGTYQ 396
YG+ Q
Sbjct: 120 VYGSQQ 125
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++G L P + E + F G+ S K+ KQ GF++FVS AE LQ
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQG 54
Query: 135 FNGTQMPSTEQNFRLNW 151
NG+ + +Q RL+W
Sbjct: 55 LNGSVI--GKQAVRLSW 69
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 95/184 (51%), Gaps = 33/184 (17%)
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKAT 259
+TD TG S+GYGFVRF DE++Q R+++EM GV C RPMRI A K A
Sbjct: 1 MTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAH 60
Query: 260 YQNTQGSQGE---------------------------------NDPNNTTIFVGGLDPSV 286
G G DPNNTT+FVGGL V
Sbjct: 61 MGVPGGPPGGMYPPSMGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYV 120
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
T+D L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGR
Sbjct: 121 TEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGR 180
Query: 347 SPSN 350
S +N
Sbjct: 181 SQNN 184
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 35/346 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y----------YGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQP 398
Y YG AQ Y PN + P YG Y QP
Sbjct: 302 YPQPYGQWGQWYGNAQQIGQY-------MPNGWQ--VPAYGMYGQP 338
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 37/341 (10%)
Query: 29 QSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEES 88
Q+ + +Q Q+ P + PQ P PS P G P RS+++G++ + E
Sbjct: 2 QNHRLMKQQQSLYHPGLLAPPQIEPIPSGNLPP-GFDPSTC----RSVYVGNVHTQVTEP 56
Query: 89 YIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFR 148
+ +F TG K+ R ++++ YGFI + +A + T NG + Q +
Sbjct: 57 LLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAALAILTLNGRHLFG--QPIK 110
Query: 149 LNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS 208
+NWA Y +G+R +D + IFVGDL+ +VTD L F +VY S A+V+ D+ TGRS
Sbjct: 111 VNWA-YASGQR-EDTSGHYNIFVGDLSPEVTDATLFACF-SVYQSCSDARVMWDQKTGRS 167
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQ 264
+G+GFV F + + ++ ++ G +R +R ATK A ++ Q K+ + T
Sbjct: 168 RGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCN-WATKVAGGIEEKQNSDSKSVVELTN 226
Query: 265 GSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV--HVKIPAGKR 311
GS EN+P TT++VG L T L F G V V++ K
Sbjct: 227 GSSEDGKEISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKG 286
Query: 312 CGFVQFANRTCAEQALSVLNG---TQLGGQSIRLSWGRSPS 349
GFV+++ T AE AL++ G + L G+ I+ SWG P+
Sbjct: 287 FGFVRYS--THAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 325
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 37 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAI 96
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 97 LTLNGRHLFGQPIKVNWAYASGQREDTSGHYN 128
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 161/324 (49%), Gaps = 12/324 (3%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 115 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE 174
Query: 257 KATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K FV
Sbjct: 175 ANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFV 234
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGY 375
+F + A A+ +NGT + G ++ WG+ + S Q YG Q + YG
Sbjct: 235 RFNSHESAAHAIVSVNGTTIEGHIVKCYWGKETPDMVSPVQQLGYPPAYG--QWGQWYGS 292
Query: 376 APPTQ-DPNMYYGGFPGYGTYQQP 398
A Q PN + P YG Y QP
Sbjct: 293 AQLGQFVPNGWQ--VPAYGLYGQP 314
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 88 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY A ++ Q + T++ G + + +
Sbjct: 148 GGQWLGGRQ--IRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 205
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 206 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 251
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 17/279 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I + N + Y F+EF H A L
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYDHRHAAASLA 65
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 66 AMNGRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAF-GPFGR 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 122 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAP-- 179
Query: 254 QYQKATYQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP 307
K T++N ++ P+N T++ GG+ +T+ +++ F +G+++ V++
Sbjct: 180 ---KTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVF 236
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K FV+F + A A+ +NG+ + G ++ WG+
Sbjct: 237 PDKGYSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGK 275
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 28/195 (14%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DD P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F D
Sbjct: 3 EDDQPR-TLYVGNLSRDVTEPLILQVFTQI-GPCKSCKMIVD--TAGNDPYCFVEFYDHR 58
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
S+ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 59 HAAASLAAMNG----------------RKIMGKEV-KVNWATTPTSQKKDTSNHFHVFVG 101
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K FG +G + ++ K GFV F N+ AE A+ + G
Sbjct: 102 DLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQW 161
Query: 335 LGGQSIRLSWG-RSP 348
LGG+ IR +W R P
Sbjct: 162 LGGRQIRTNWATRKP 176
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAEQALSVL 330
T++VG L VT+ ++ VF Q G K+ AG C FV+F + A +L+ +
Sbjct: 9 TLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHAAASLAAM 67
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSD 354
NG ++ G+ ++++W +P++++ D
Sbjct: 68 NGRKIMGKEVKVNWATTPTSQKKD 91
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 40/305 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRRIFDTE--IRVNWA-YQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK----- 247
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSL 191
Query: 248 -------KAATGQQYQKATYQNTQGSQGENDPN-------------------NTTIFVGG 281
G+ G P NTT++VG
Sbjct: 192 GGGGGGGGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGN 251
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
L P T L +F G L +++ A + FV+ A A+ L G + G+ I+
Sbjct: 252 LVPYCTQADLIPLFQTIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIK 311
Query: 342 LSWGR 346
SWG+
Sbjct: 312 CSWGK 316
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E +I ++FG GE K+IR ++ Y F+EF SH AA L
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPG---NDPYAFLEFTSHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ ++L++ F A +
Sbjct: 65 AMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K K
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPN 181
Query: 251 TGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPA 308
G K Q T ++ P NTT++ GG +V T+D+++ F Q+G++ V++
Sbjct: 182 EGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFR 241
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F + A A+ + T++ G ++ WG+
Sbjct: 242 DKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGK 279
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY--------GAGERRQDDGPDF------- 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQS 202
Query: 168 -----TIFVGDLAADV-TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++V T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SPTNTTVYCGGFTSNVITEDLMQNTF-SQFGQIQDVRVF------RDKGYAFIRF 250
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LD SVT+ + T+FGQ GE+ KI P F++F + T A AL+ +N
Sbjct: 9 TLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATALAAMNK 68
Query: 333 TQLGGQSIRLSWGRSPSN 350
+ + ++++W SP N
Sbjct: 69 RVVLDKEMKVNWATSPGN 86
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 21/301 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 125 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 184 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQ 357
+++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D +Q
Sbjct: 244 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQ 303
Query: 358 W 358
W
Sbjct: 304 W 304
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + +++ A T + QK + ++ +FVG
Sbjct: 60 DAAAALAAMNGRKILGKEVKVNWATTPSS------QKKILPVSTPVPNALISDHFHVFVG 113
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 114 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 173
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 174 LGGRQIRTNWATRKPPAPKSTQ 195
>gi|427778835|gb|JAA54869.1| Putative trna selenocysteine 1-associated protein 1 [Rhipicephalus
pulchellus]
Length = 236
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 27/208 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IR++ T GYGF++F AAER L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWA--------------------TYGAGERRQ--DDGPDFTI 169
NG +P+ Q FRLN A G G R Q + ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDL+ADV D +L + F Y SV+ AKVV D TG SKG+GFVRF D +E ++ +M
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLD-PTGLSKGFGFVRFSDGTEYQEALVDM 185
Query: 230 -NGVLCSTRPMRIGPAATKKAATGQQYQ 256
+ +L ++P+R+G A ++AA G Y+
Sbjct: 186 QHSLLVGSKPIRVGVANPRRAAAGLLYR 213
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ DR TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFSMMGENPVHVKIIRDRLTGLPRGYGFLDFGDEEAAERALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGSQGENDP------NNTTI 277
NG + + +P R+ A G Q + G P N ++
Sbjct: 67 RCNGKPIPNAMQPKTFRLNHANNSTGGGGGGGGGGYQQQGYANGGGGRPQYGSSSNELSM 126
Query: 278 FVGGLDPSVTDDILKTVFGQ-YGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLN 331
FVG L V D +L F Q Y + K+ P G K GFV+F++ T ++AL +
Sbjct: 127 FVGDLSADVDDTLLYQAFSQRYPSVRAAKVVLDPTGLSKGFGFVRFSDGTEYQEALVDMQ 186
Query: 332 GTQL-GGQSIRL 342
+ L G + IR+
Sbjct: 187 HSLLVGSKPIRV 198
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 147/288 (51%), Gaps = 7/288 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMN 78
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 79 GRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGRISD 134
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 135 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYE 194
Query: 257 KATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +++ K FV
Sbjct: 195 SNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFV 254
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 255 RFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + F G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G + + +
Sbjct: 168 GGQWLGGRQ--IRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL 225
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 226 TEQLMRQTF-SPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 271
>gi|328709618|ref|XP_003244016.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 347
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 15/206 (7%)
Query: 53 PPPSQQTQPYGVAPD-------ASSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
PPP+QQT ++P+ AS+ G + S+W+G L+P+M ES+I F GE+
Sbjct: 40 PPPTQQTASTFISPNVPVQQPQASTAGQNVSSVWMGSLEPYMTESFITGAFQKMGEYPKN 99
Query: 104 -KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
K++RNK T + GY F++F + V+ NG +P T R G +
Sbjct: 100 VKLMRNKNTGETAGYAFVDFYDPVS---VMHKLNGKYIPGTNPPVRFKLNRAGNPGKITT 156
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
DF++++G+L++DV DY L +TF Y S++ AKVV D + G SKGYGF+RFG E EQ
Sbjct: 157 SNRDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLD-SAGYSKGYGFIRFGSEEEQ 215
Query: 223 LRSMTEMNGVL-CSTRPMRIGPAATK 247
+ MNG ++P+++ K
Sbjct: 216 KHCLNNMNGFPGLGSKPIKVSSVIPK 241
>gi|410927733|ref|XP_003977295.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 304
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 10/204 (4%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L+ +M+E +I F GE VS ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERC 60
Query: 132 LQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P S F+LN AT+G +QD G +++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG----KQDVGQMYSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK- 247
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + ++ +R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALDECQGAVGLGSKALRLSLAANNL 175
Query: 248 KAATGQQYQKATYQNTQGSQGEND 271
+ QQ + Q + G +G+ D
Sbjct: 176 RNRQPQQSETRAAQPSSGYRGDYD 199
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 32/202 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + F + V +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLETYMDEKFITRAFSTMGEQVVSVRIIRNKMTGGALGYCFVEMTDEATAERCLR 62
Query: 228 EMNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++NG L P ++ A K GQ Y ++FVG L
Sbjct: 63 KINGKSLPGASPPTRFKLNRATFGKQDVGQMY--------------------SLFVGDLT 102
Query: 284 PSVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
P V D +L F +Y G++V + K CGFVQF + ++AL G LG
Sbjct: 103 PEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAVGLG 162
Query: 337 GQSIRLSW-GRSPSNKQSDQAQ 357
+++RLS + N+Q Q++
Sbjct: 163 SKALRLSLAANNLRNRQPQQSE 184
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 155/303 (51%), Gaps = 34/303 (11%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
DAS+ RS+++G++ + E + +FG G K++R ++++ YGF+ +
Sbjct: 20 DAST--CRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRR 73
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+A + + NG + Q ++NWA A +R+D F IFVGDL+ +VTD +L
Sbjct: 74 SAALAILSLNGRHL--FGQPIKVNWAY--ASSQREDTSGHFNIFVGDLSPEVTDAMLFAC 129
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R AA
Sbjct: 130 FSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAA- 187
Query: 247 KKAATGQQYQ----KATYQNTQGS--QGENDPNN---------TTIFVGGLDPSVTDDIL 291
K A + Q K+ + + GS G+ NN TT++VG L P V+ L
Sbjct: 188 KGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDL 247
Query: 292 KTVFGQYGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ---LGGQSIRLSWGR 346
F G V V+I K GFV++ T AE AL++ G L G+ I+ SWG
Sbjct: 248 HRHFHSLGAGVIEEVRIQRDKGFGFVRY--NTHAEAALAIQMGNTRSFLCGRQIKCSWGS 305
Query: 347 SPS 349
P+
Sbjct: 306 KPT 308
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F ++ V+G K+V + YGFV + D ++
Sbjct: 26 SVYVGNIHIQVTEPLLQEVFGSI-GPVEGCKLVRKEKSS----YGFVHYFDRRSAALAIL 80
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 81 SLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHFNIFVGDLSPEVT 122
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D +L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 123 DAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIR 182
Query: 342 LSWGRSPSNKQSDQ 355
+W + D+
Sbjct: 183 CNWAAKGAGVNEDK 196
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 91 PIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRS 150
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + G + S + R NWA GAG
Sbjct: 151 RGFGFVSFRNQQEAQNAINDLTGKWLGSRQ--IRCNWAAKGAGVNEDKQGSDTKSVVELS 208
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
E +D P+ T++VG+LA +V+ L F ++ GA V+ +
Sbjct: 209 NGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSL-----GAGVIEEVR 263
Query: 205 TGRSKGYGFVRFGDESEQLRS--MTEMNGVLC 234
R KG+GFVR+ +E + M LC
Sbjct: 264 IQRDKGFGFVRYNTHAEAALAIQMGNTRSFLC 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VT+ +L+ VFG G + K+ ++ GFV + +R A A+ LNG
Sbjct: 26 SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGR 85
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 86 HLFGQPIKVNWAYASSQREDTSGHFN 111
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 43/308 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVL 132
L++G+L P + E + IF G K+I ++ N+ G YGF+E++ AAE L
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETAL 75
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
QT NG ++ TE R+NWA Y + ++D + +FVGDL+ +V D VL + F A +
Sbjct: 76 QTLNGRKIFDTE--IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSA-FG 131
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +R +R+ A K +
Sbjct: 132 TLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSP 191
Query: 253 QQYQKATY---------------QNTQGSQGENDPN-------------------NTTIF 278
N+ G G P NTT++
Sbjct: 192 GGPGGPGGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVY 251
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
VG L P T L +F G L +++ + + FV+ A A+ L G + G+
Sbjct: 252 VGNLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQLVHGR 311
Query: 339 SIRLSWGR 346
I+ SWG+
Sbjct: 312 PIKCSWGK 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFANRTCAE 324
P ++VG L P VT+ +L +F G + HVKI G GFV++ + AE
Sbjct: 13 PRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAE 72
Query: 325 QALSVLNGTQLGGQSIRLSW 344
AL LNG ++ IR++W
Sbjct: 73 TALQTLNGRKIFDTEIRVNW 92
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 20/297 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YG 118
++L++G+L + E I +F G S K+I +++ N S G Y
Sbjct: 8 KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+G++V + K FV+F+ A A+ +NGT + G ++ WG+ + D
Sbjct: 244 FGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKETPDTTKD 300
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTD----RTTGRSKG------ 210
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ R S G
Sbjct: 2 EDDGQPKTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEQPDSRRVNSSVGFSVLQH 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 TSNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 200
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|7493336|pir||T39935 RNA binding protein - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 240
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%), Gaps = 5/211 (2%)
Query: 12 QTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSD 71
+ + + +Q Q + +S + Q Q P+ P + S+ T YG + D +
Sbjct: 34 KDNSFNEQDDQEVDNDYKSNDEPVQSQDPISPNMASNESG---NSENTSNYGSSRDENVY 90
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A
Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
+ + N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F +
Sbjct: 151 M-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASR 209
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
Y+S K AK++TD T S+GYGFVRF DE++
Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDEND 240
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFA 318
S+ EN TT+++G L+P VT+ ++ V+ G+ V VK+ + G FV+FA
Sbjct: 83 SSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFA 142
Query: 319 NRTCAEQALSVLNGTQLGGQSI-RLSWG 345
+ A A+S+ N G + +L+W
Sbjct: 143 SPHEASSAMSMNNKPIPGTNHLFKLNWA 170
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 20/282 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+S+ + L ++E+ ++ IF G VS K++++K T YGFIEF+ H AE +
Sbjct: 39 KSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDK-TGTHARYGFIEFIDHTTAEFAKE 97
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG + E ++NW + + D F +FVG L +VT+ +L + F A +
Sbjct: 98 NMNGRLVYGKE--LKVNWTH----DSQSDAKGSFKLFVGGLHTEVTNEILYQNF-AKFGR 150
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI--GPAATKKAAT 251
V A+V+ +G+S+GYGFV F + + +M MNG R +++ G A K T
Sbjct: 151 VSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWGTATQKPTET 210
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PA 308
++ + T + N ++VGG+ + ++ +FG +GE++ +KI A
Sbjct: 211 VKRGFDEISRETSNT-------NNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDA 263
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K GFV+F + A +A+ +LNG QL G + WG+ N
Sbjct: 264 EKAYGFVRFVSHDNATKAIMMLNGYQLNGGCLNCMWGKESFN 305
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 67 DASSD--GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
D+ SD G L++G L + + F G +V+R Q+ S+GYGF+ F+
Sbjct: 116 DSQSDAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIR 175
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWAT----------YGAGE-RRQDDGPDFTIFVGD 173
AE +Q NG ++ + ++NW T G E R+ + ++VG
Sbjct: 176 KEDAETAMQMMNGEKIQG--RTVKVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGG 233
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+ + + +++ F + + K++ T K YGFVRF +++ +NG
Sbjct: 234 IPKETEESTMRKLF-GDFGEIIDLKIM---RTDAEKAYGFVRFVSHDNATKAIMMLNG 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 44 PVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
V W P + + +S+ ++++G + EES + +FG GE +
Sbjct: 197 KVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDL 256
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
K++R T+ + YGF+ FVSH A + + NG Q+
Sbjct: 257 KIMR---TDAEKAYGFVRFVSHDNATKAIMMLNGYQL 290
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|351695933|gb|EHA98851.1| tRNA selenocysteine 1-associated protein 1 [Heterocephalus glaber]
Length = 262
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 7/152 (4%)
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGE 158
+S K+IRN+ T GY F+EF A AE+ L NG +P + + F+LN+ATYG
Sbjct: 6 MSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--- 62
Query: 159 RRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGD 218
++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F D
Sbjct: 63 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGISKGYGFVKFTD 121
Query: 219 ESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
E EQ R++TE G + ++P+R+ A K +
Sbjct: 122 ELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 153
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
+V K++ +R TG GY FV F D + + + ++NG +P+ P AT
Sbjct: 4 TVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING-----KPL---PGATPAKRFK 55
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKI 306
Y ATY G Q +N P ++FVG L P V D +L F + G++V +
Sbjct: 56 LNY--ATY----GKQPDNSP-EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT 108
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQ-LGGQSIRLS 343
K GFV+F + ++AL+ G LG + +RLS
Sbjct: 109 GISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLS 146
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 61 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGISKGYGFVK 118
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 119 FTDELEQKRALTECQG 134
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 12/288 (4%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I +N + Y F+EF H A L N
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMN 79
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 80 GRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISD 135
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A +
Sbjct: 136 ARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQE 195
Query: 257 KATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K FV
Sbjct: 196 NNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFV 255
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 256 RFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 303
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 16/284 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ K FV+F + A A+ +NGT + G ++ WG+
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 16/284 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ K FV+F + A A+ +NGT + G ++ WG+
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 285
>gi|254572874|ref|XP_002493546.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|238033345|emb|CAY71367.1| RNA binding protein, component of the U1 snRNP protein
[Komagataella pastoris GS115]
gi|328354629|emb|CCA41026.1| Protein NAM8 [Komagataella pastoris CBS 7435]
Length = 378
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 57/325 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGK-----VIRNKQTNFSE-----GYGFIEFVSH 125
+W+GDL P EE I I+ +S K VI++K N ++ GY F+ F +
Sbjct: 22 VWMGDLLPSWEEDTIRQIWLSVDPSLSEKIHSIRVIKDKTPNLAKLNNNPGYCFLRFTDY 81
Query: 126 AAAERVLQTFNGTQMPS-TEQNFRLNWAT---------------YGAGERRQDDGPDFTI 169
A ++ + G +P+ ++ F+LNWA+ + R Q++ +I
Sbjct: 82 DTANELITNYQGKPIPNHKDKFFKLNWASSHTQNQQQQQGYQNTQDSSNRTQEN----SI 137
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FVGDLA VTD +L + F+ Y S A+++ D TG+++G+GFV+F D E +++ EM
Sbjct: 138 FVGDLAQGVTDTMLLDAFKKNYPSAFSARIMIDSQTGKTRGFGFVKFRDIQELNKALIEM 197
Query: 230 NGVLCSTRPMRIGPAATKKAAT-GQQYQKATYQ-------------------------NT 263
G + + RP+R+ A + T G Q +++ Q
Sbjct: 198 QGFVLNGRPIRVSTAGRSTSNTNGGQLKQSVQQSSTAPSSSGSQSYGFGNRLVIPPLPLA 257
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
+DPNNT + V +D L F +G++V K K V +A+R A
Sbjct: 258 PPLNPASDPNNTALSVTNIDELTEQKELWEYFQPFGKIVLFK-QTSKESAIVVYADRLGA 316
Query: 324 EQALSVLNGTQLGGQSIRLSWGRSP 348
E A+ +NG Q+G I + WG SP
Sbjct: 317 ELAVREMNGCQVGFSRIVVKWGESP 341
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 141/281 (50%), Gaps = 16/281 (5%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAASALAAMN 107
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 108 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAA 165
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 166 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 224
Query: 247 KKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 225 KPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 284
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ K FV+F + A A+ +NGT + G ++ WG+
Sbjct: 285 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGK 325
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P + V+ AS D +++GDL P + I + F G +
Sbjct: 118 VNWATTPSSQKKDTSSSTVVSTQASQDHFH-VFVGDLSPEITTEDIKAAFAPFGRISDAR 176
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA---------TYG 155
V+++ T S+GYGF+ F + AE +Q G + + R NWA TY
Sbjct: 177 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ--IRTNWATRKPPAPKSTYE 234
Query: 156 AGERR--------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
+ ++ Q + T++ G + + +T+ ++++TF + + +V D
Sbjct: 235 SNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSP-FGQIMEIRVFPD----- 288
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ +NG
Sbjct: 289 -KGYSFVRFNSHESAAHAIVSVNG 311
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 169/379 (44%), Gaps = 45/379 (11%)
Query: 5 PPSQPSDQTSQYQQQHQQWMAYQQQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGV 64
PP QPS QQQ QQ Q S Q + + +PPP P +P Q T P
Sbjct: 15 PPPQPSAGAPGQQQQQQQQFDGSQGSNNSQGGNPSHMPPP-PLAPVVIP---QNTNPIPT 70
Query: 65 APDASSDGIRSLWIGDLQPWMEESY------IASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
A +S +R + + W+ S IF TG S K+I +K + YG
Sbjct: 71 A--ITSPNVRQYDVTYFRRWLCASCGSGTKQARPIFETTGHVQSVKIIPDKNSK-GLNYG 127
Query: 119 FIEFVSHAAAERVLQTFNGTQMPST------------EQNFRLNWATYGAGERRQDDGPD 166
F+E+ AAER + T NG ++ + +Q R+NWA ++D
Sbjct: 128 FVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPHPLQQEIRVNWAYQSNSNNKEDTSNH 187
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F IFVGDL+ +V D VL + F A + SV A+V+ D TGRS+GYGFV F + S+ +++
Sbjct: 188 FHIFVGDLSNEVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKAL 246
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQGEN--- 270
+ M+G +R +R A K + Q Q T G Q +
Sbjct: 247 SSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVV 306
Query: 271 --DPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQAL 327
P TT +VG L P T + L +F +G +V + A + FV+ A A+
Sbjct: 307 AQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMAI 366
Query: 328 SVLNGTQLGGQSIRLSWGR 346
L+G + G+ ++ SWG+
Sbjct: 367 CQLSGYNVNGRPLKCSWGK 385
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 25/274 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + IF G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIEK 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ IF+ +L +D+ + L +TF +V+ ++
Sbjct: 101 LNYT--PIKGRLCRIMWSQRDPALRKKGSA---NIFIKNLHSDIDNKALYDTF-SVFGNI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+K+ TD TG+SKG+GFV F D++ ++ +NG+L + + + +GP ++K Q
Sbjct: 155 LSSKIATDE-TGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQ- 212
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----- 309
E+ N T I+V ++ TD+ +F +YG+++ +
Sbjct: 213 ------------LEESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL 260
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
K GFV F N A +A+ LNG+Q Q + +S
Sbjct: 261 KGFGFVDFENHEDAAKAVEELNGSQFKDQELFVS 294
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 120 PALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEDD 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +FT I+V ++ + TD
Sbjct: 179 TAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFT 238
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F + Y V A + G+ KG+GFV F + + +++ E+NG + + + A
Sbjct: 239 ELF-SKYGKVLSA-ALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRA 296
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + + QG N +F+ LD S+ D+ LK F YG +
Sbjct: 297 QKKYERMQELKKQYEASRLEKMAKYQGVN------LFIKNLDDSIDDEKLKEEFAPYGNI 350
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
V++ + GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 351 TSVRVMRTENGKSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 410
Query: 357 Q 357
Q
Sbjct: 411 Q 411
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ S ++++ ++ + +F G+ +S + + + +G+GF++F +H
Sbjct: 214 EESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL-KGFGFVDFENHE 272
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVG 172
A + ++ NG+Q E Y ER Q+ + +F+
Sbjct: 273 DAAKAVEELNGSQFKDQELFVSRAQKKY---ERMQELKKQYEASRLEKMAKYQGVNLFIK 329
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L + D L+E F A Y ++ +V+ RT G+S+G+GFV F E +++TE N
Sbjct: 330 NLDDSIDDEKLKEEF-APYGNITSVRVM--RTENGKSRGFGFVCFSTPEEATKAITEKNQ 386
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ + +P+ + A K Q Q+ +N
Sbjct: 387 QIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 417
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTG--EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
R+L++G+L + E + +F + S K+I + S+ Y F+EF AE
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGN--SDPYCFVEFYDSVTAEAA 82
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+ NG + ++ ++NWAT R+D +FVGDL ++ L+ F Y
Sbjct: 83 MVAMNGRTV--FDKPIKVNWATTQGS--RKDTTHHHHVFVGDLVQEMKTAELRALFDK-Y 137
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP----MRIGPAATK 247
S+ A+VV D TG+S+ YGFV F E + ++ EMNG + P +R G A K
Sbjct: 138 GSITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATRK 197
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT-DDILKTVFGQYGELVHVKI 306
T + + ++ + E PNN T++VGGL + +D+L+ VFG +G + V+
Sbjct: 198 --PTSHKPPQIEAKDYERVLNETSPNNCTVYVGGLQFKFSAEDLLRKVFGPFGAIQEVRT 255
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
K FV+FAN A A+ ++G+ + G ++ SWG+ SN+ S
Sbjct: 256 FPEKAFAFVRFANHESATNAIVSVHGSPIEGHVVKCSWGKE-SNESS 301
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G + K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG--------PAA 245
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 246 TKKAATG--------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDI 290
+ K + Q+ T+ ++ P NTT++ GG P+V +DD+
Sbjct: 181 SSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYN---QSSPTNTTVYCGGFPPNVISDDL 237
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ FGQ+G + V++ K F++F + A A+ + T++ G ++ WG+
Sbjct: 238 MHKHFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGK 293
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 27/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + +S + +F G K+IR ++++F GF+++
Sbjct: 71 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSF----GFVDYYDR 126
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + NG Q+ Q ++NWA A +R+D F IFVGDL +VTD L
Sbjct: 127 RSAAIAIVSLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFA 182
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
A ++S A+V+ D+ TGRS+G+GFV F ++ + ++ E+NG R +R A
Sbjct: 183 F-FAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCN-WA 240
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK A G++ Q K + T GS EN+P TT++VG L V +
Sbjct: 241 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 300
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
+ F G + V++ K GFV+++ A A+ NG +GG+ I+ SWG P
Sbjct: 301 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKP 360
Query: 349 S 349
+
Sbjct: 361 T 361
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +L E F+++ V+G K++ + +GFV + D ++
Sbjct: 80 SVYVGNIHLQVTDSLLHEVFQSI-GPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 134
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y +TQ E+ + IFVG L P VT
Sbjct: 135 SLNGRQLFGQPIKVNWA---------------YASTQR---EDTSGHFNIFVGDLCPEVT 176
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ LNG LG + +R
Sbjct: 177 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 236
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD--------PNMYYGGFP 390
+W +N ++ + G G G +D +Y G P
Sbjct: 237 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLP 293
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALF-GTMGPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLDKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 38/312 (12%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ P + E + +F G K+IR ++++ YGF+++
Sbjct: 38 PGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDR 93
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
++A + T NG + Q+ ++NWA Y G+R +D F IFVGDL+ +VTD L
Sbjct: 94 SSAAIAIVTLNGRNI--FGQSIKVNWA-YTRGQR-EDTSGHFHIFVGDLSPEVTDATLYA 149
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F A YSS A+V+ D+ TGRS+G+GFV F ++ E ++ ++ G +R +R A
Sbjct: 150 CFSA-YSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCN-WA 207
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK A + Q K+ + T G+ E +P TT++VG L P VT
Sbjct: 208 TKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVD 267
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL------ 342
L F G + V++ K GFV+++ A A+ + N L G+ I++
Sbjct: 268 LHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKMHITRKK 327
Query: 343 -----SWGRSPS 349
SWG P+
Sbjct: 328 AVSKCSWGSKPT 339
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ V++ +LQE F + +++G K++ + YGFV + D S ++
Sbjct: 47 SVYVGNIHPQVSEPLLQELFSSA-GALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIV 101
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG + GQ K + T+G Q E+ + IFVG L P VT
Sbjct: 102 TLNG----------------RNIFGQSI-KVNWAYTRG-QREDTSGHFHIFVGDLSPEVT 143
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ L G LG + IR
Sbjct: 144 DATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIR 203
Query: 342 LSWGRSPSN 350
+W +N
Sbjct: 204 CNWATKGAN 212
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +FG G S K+I + T + Y F+EF H A +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F +
Sbjct: 65 AMNGRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-GPFGK 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ +VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT 180
Query: 254 QYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
T Q + ++ P+N T++ GG+ +T+ I++ F +G ++ +++ K
Sbjct: 181 NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGY 240
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
FV+F + A A+ +NGT + G ++ WG+ ++ S
Sbjct: 241 SFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVS 281
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
DD T++VG+L+ DVT+ ++ E F + K K++ D T Y FV F +
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQI-GPCKSCKMIVD--TAGHDPYCFVEFYEHRH 58
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGG 281
++ MNG + G++ K + T SQ ++ ++ +FVG
Sbjct: 59 ATATIAAMNG----------------RKILGKEV-KVNWATTPTSQKKDTSSHFHVFVGD 101
Query: 282 LDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQL 335
L P +T D +K FG +G++ ++ K GFV F N+ AE A+ + G L
Sbjct: 102 LSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 161
Query: 336 GGQSIRLSWG-RSPS 349
GG+ IR +W R P+
Sbjct: 162 GGRQIRTNWATRKPA 176
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAE 324
+D T++VG L VT+ ++ +FGQ G K+ AG C FV+F A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHAT 60
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
++ +NG ++ G+ ++++W +P++++ D +
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQKKDTS 92
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 23/343 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E I +F G S K+I +N + Y F+EF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALA 66
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDI 124
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 125 KSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 244 AATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+++
Sbjct: 184 ATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 243
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F+ A A+ +NGT + G ++ WG+ + + Q
Sbjct: 244 EIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVIQFF 303
Query: 363 YYGFAQGYEAYG-----YAPPTQDPNMYYGGF--PGYGTYQQP 398
F Y +G Y P Q G+ P YG Y QP
Sbjct: 304 IALFKVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 346
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+DDG T++VG+L+ DVT+ ++ + F + K K++T+ T+ + Y FV F +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKMITEHTS--NDPYCFVEFYEHR 59
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
+ ++ MNG + +++ A T + QK + ++ +FVG
Sbjct: 60 DAAAALAAMNGRKILGKEVKVNWATTPSS------QKKILPVSTPVPNALISDHFHVFVG 113
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K+ F +G++ ++ K GFV F N+ AE A+ + G
Sbjct: 114 DLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW 173
Query: 335 LGGQSIRLSWG-RSPSNKQSDQ 355
LGG+ IR +W R P +S Q
Sbjct: 174 LGGRQIRTNWATRKPPAPKSTQ 195
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 159/322 (49%), Gaps = 42/322 (13%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN-----------KQTNF--------- 113
++L++G+L + E I +F G S K+I + + NF
Sbjct: 8 KTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWLCCLQH 67
Query: 114 --SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV 171
S+ Y F+EFV H A T N ++ E ++NWAT + +++ D F +FV
Sbjct: 68 TSSDPYCFVEFVDHKDAASARATMNKRKILGKE--VKVNWATSPSCQKK-DTSNHFHVFV 124
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
GDL+ D+T ++ F A + + A+V+ D TG+SKGYGFV F ++ + ++++M G
Sbjct: 125 GDLSPDITTEDIRAAF-APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAG 183
Query: 232 VLCSTRPMRIGPAATKKAA------TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
R +R A K A G ++ K TQ S P+N T++ GG+
Sbjct: 184 QWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSS-----PHNCTVYCGGIQSG 238
Query: 286 VTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
+T+ +++ F +G+++ +++ K FV+F++ A A+ +NGT + G ++ WG
Sbjct: 239 LTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWG 298
Query: 346 R-SPS-NKQSDQAQWNGGGYYG 365
+ SP K S Q ++N Y+G
Sbjct: 299 KESPDMQKNSQQVEYN---YWG 317
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALF-GTMGPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLDKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 27/301 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + +S + +F G K+IR ++++F GF+++
Sbjct: 33 PGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSF----GFVDYYDR 88
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A + + NG Q+ Q ++NWA A +R+D F IFVGDL +VTD L
Sbjct: 89 RSAAIAIVSLNGRQLFG--QPIKVNWAY--ASTQREDTSGHFNIFVGDLCPEVTDAALFA 144
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
A ++S A+V+ D+ TGRS+G+GFV F ++ + ++ E+NG R +R A
Sbjct: 145 F-FAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCN-WA 202
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDI 290
TK A G++ Q K + T GS EN+P TT++VG L V +
Sbjct: 203 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 262
Query: 291 LKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSP 348
+ F G + V++ K GFV+++ A A+ NG +GG+ I+ SWG P
Sbjct: 263 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKP 322
Query: 349 S 349
+
Sbjct: 323 T 323
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD +L E F+++ V+G K++ + +GFV + D ++
Sbjct: 42 SVYVGNIHLQVTDSLLHEVFQSI-GPVEGCKLIRKEKSS----FGFVDYYDRRSAAIAIV 96
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y +TQ E+ + IFVG L P VT
Sbjct: 97 SLNGRQLFGQPIKVNWA---------------YASTQR---EDTSGHFNIFVGDLCPEVT 138
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F + ++ ++ G FV F N+ A+ A++ LNG LG + +R
Sbjct: 139 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 198
Query: 342 LSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQD--------PNMYYGGFP 390
+W +N ++ + G G G +D +Y G P
Sbjct: 199 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLP 255
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 142/278 (51%), Gaps = 12/278 (4%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + E ++ ++FG G+ K+IR ++ Y F+EF H AA L
Sbjct: 8 KTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPG---NDPYAFLEFTCHTAAATALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N + ++ ++NWAT + + D IFVGDL+ ++ +L+E F A +
Sbjct: 65 AMN--KRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAF-APFGE 121
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +++ ++ MNG +R +R + K A G
Sbjct: 122 ISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGV 181
Query: 254 Q-----YQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIP 307
++A ++ P NTT++ GG ++ T+++++ F Q+G++ +++
Sbjct: 182 NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF 241
Query: 308 AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
K F++F + A A+ + T++ G +++ WG
Sbjct: 242 RDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWG 279
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F GE + +++R+ QT S+GY F+ F
Sbjct: 85 GNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 144
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATY---------GAGERRQDDGPDF------ 167
V A AE +Q NG + S ++ R NW+T GA ++ P F
Sbjct: 145 VKKADAEAAIQAMNGQWLGS--RSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQ 202
Query: 168 ------TIFVGDLAAD-VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
T++ G ++ +T+ ++Q TF + + ++ +V R KGY F+RF
Sbjct: 203 SSPTNTTVYCGGFTSNIITEELMQNTF-SQFGQIQDIRVF------RDKGYAFIRF 251
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LDPSVT+ L T+FG G++ KI P F++F T A AL+ +N
Sbjct: 9 TLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAATALAAMNK 68
Query: 333 TQLGGQSIRLSWGRSPSN 350
+ + ++++W SP N
Sbjct: 69 RVVLDKEMKVNWATSPGN 86
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLEKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLEKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPG---NDPYAFIEYSTYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++T MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKATYQN-------------TQGSQ--------GENDPNNTTIFVGGLDPSV-TDDIL 291
+ K Q +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 180 EPNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLM 239
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A +A+ + +++ G ++ WG+
Sbjct: 240 HKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGK 294
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE + NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAITAMNGQWIGS--RSIRTNWST 172
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 8/135 (5%)
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
+ D NN T++VGGLD +V++D L+ F +YG++ VKIP GK+CGFVQ+ NRT AE+AL
Sbjct: 16 DGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEEALQ 75
Query: 329 VLNGTQLGGQSIRLSWGRSPSNKQ----SDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNM 384
LNG +G Q++RLSWGRSPS+KQ S + N YYG Y YGYA P PNM
Sbjct: 76 GLNGAVIGKQAVRLSWGRSPSHKQSRGDSGNRRNNNNMYYG-TPFYGGYGYASPVPHPNM 134
Query: 385 Y---YGGFPGYGTYQ 396
Y YG +P YG Q
Sbjct: 135 YAPAYGAYPFYGNQQ 149
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MNG +R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLEKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 25/303 (8%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 296
Query: 356 AQW 358
+QW
Sbjct: 297 SQW 299
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 37/345 (10%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 296
Query: 356 AQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
+QW G + Y P Q G+ P YG Y QP
Sbjct: 297 SQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 331
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 37/345 (10%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 296
Query: 356 AQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
+QW G + Y P Q G+ P YG Y QP
Sbjct: 297 SQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 331
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 25/303 (8%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 131
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 132 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 190
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 191 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 250
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 251 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 310
Query: 356 AQW 358
+QW
Sbjct: 311 SQW 313
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 119 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 178
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 179 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 236
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 237 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 282
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 30/329 (9%)
Query: 36 QHQTPVPPPVGWTPQP----VPPPSQQTQPYGVAPDA-SSDGIRSLWIGDLQPWMEESYI 90
Q TP+P G P P P P + PY V P + +S SL++G+L + E+ +
Sbjct: 13 QEHTPIPAQDGAAPAPQVVQPPAPVHASMPYSVPPASGASTPSASLYVGELDSTVTEAML 72
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
IF G S +V R+ T S GY ++ +++ A ER L+ N + + + R+
Sbjct: 73 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIM 130
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
W+ R+ G IF+ +L + L +TF A + +V KV TD GRS+G
Sbjct: 131 WSQRDPALRKTGQG---NIFIKNLDEQIDHKALHDTF-AAFGNVLSCKVATDE-NGRSRG 185
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
+GFV + ++ +NG+L + + + +G +KK ++ + + Q SQ
Sbjct: 186 FGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKK-------ERQAHIDEQKSQF-- 236
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AGKRCGFVQFANRTCAEQ 325
T ++V LD VTDD +F ++GE+ + K GFV F + A+
Sbjct: 237 ----TNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQA 292
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
A+ L+ T+L G+ + ++ + + ++ +
Sbjct: 293 AVDALHDTELNGKKLFVTRAQKKAEREEE 321
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L + + +F GE V+ V++ + S+G+GF+ F H +A+ +
Sbjct: 238 NLYVKNLDTEVTDDEFNDMFAKFGE-VTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ T++ E+ R ++ + + G + +++ +L D+ D
Sbjct: 297 LHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGAN--LYIKNLEDDMDDD 354
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+ F + ++ K++ D G SKG+GFV + E +++ EMN + ++P+ +
Sbjct: 355 KLRAEFEP-FGTITSCKIMRDEK-GTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYV 412
Query: 242 GPA 244
PA
Sbjct: 413 SPA 415
>gi|291228733|ref|XP_002734330.1| PREDICTED: tRNA selenocysteine associated protein 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 347
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 18/191 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GD++P+ +E++I F H+GE + K+++NK T Y F++F AAAERV+
Sbjct: 4 TLWMGDVEPFWDENFIRGAFSHSGEQPTAVKLMKNKLTGGQARYCFVDFRDSAAAERVMS 63
Query: 134 TFNGTQMPSTE--QNFRLNWATYGA-------------GERRQDDGPDFTIFVGDLAADV 178
NG +P++ + F+LN+A YG + + + +F++FVG+L+ +V
Sbjct: 64 ICNGKPVPNSTPPRMFKLNFAVYGMQAPPKAAGATGGPADPKSFNRKEFSLFVGELSPEV 123
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTR 237
DY L F Y S+KGAKV+ D G S+G+GFVRFG E EQ R++ EM N R
Sbjct: 124 DDYALYNFFSRRYPSIKGAKVIMD-NAGMSRGFGFVRFGSEEEQQRALNEMQNASGLGGR 182
Query: 238 PMRIGPAATKK 248
+R+ A KK
Sbjct: 183 SLRVSIATPKK 193
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 37/345 (10%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 117
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 118 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 177 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 236
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + +Q D
Sbjct: 237 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDY 296
Query: 356 AQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGF--PGYGTYQQP 398
+QW G + Y P Q G+ P YG Y QP
Sbjct: 297 SQW----------GQWSQVYGNPQQYGQYMANGWQVPPYGVYGQP 331
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 165 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 222
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 223 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 268
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 25/303 (8%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIR----NKQTNFSEG-----------YGFIE 121
++G+L + E I +F G S K+I +++ N S G Y F+E
Sbjct: 48 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 107
Query: 122 FVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
F H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++T
Sbjct: 108 FYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTE 164
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G R +R
Sbjct: 165 DIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 223
Query: 242 GPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A + T Q + ++ P N T++ GG+ +TD +++ F +G+
Sbjct: 224 NWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQ 283
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-----SPSNKQSDQ 355
++ +++ K FV+F+ A A+ +NGT + G ++ WG+ + + +Q D
Sbjct: 284 IMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTAIEGHVVKCYWGKESPDMTKNFQQVDY 343
Query: 356 AQW 358
+QW
Sbjct: 344 SQW 346
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 152 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 211
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 212 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 269
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 270 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 315
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 28/294 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKATYQN------------TQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILK 292
+ K Q +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 180 EASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 239
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 240 KHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ASTALTAMNKRLFLEKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G+L + E + ++F G K+IR ++ Y F+EF +H A L
Sbjct: 80 RTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPG---NDPYAFVEFTNHQCAATALA 136
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 137 AMNKRSF--LEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAF-APFGE 193
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F +SE ++ MNG +R +R +T+K +
Sbjct: 194 ISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTN-WSTRKPPPPR 252
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
+ N++ + E ++ GG +TD+++K F +G + +++ K
Sbjct: 253 SERPRHSNNSKPNYEE------VLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYA 306
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS---------PSNKQSDQAQWNGGGY- 363
F++F + A A+ + T++ G ++ WG+ +N Q+ Q G Y
Sbjct: 307 FIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNSVGPNANHQAQQVTAGAGQYP 366
Query: 364 YGFAQ 368
YG+ Q
Sbjct: 367 YGYGQ 371
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 157 GNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSF 216
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT-------YGAGERRQDDGPDF--TIFVGD 173
V + AE + NG + S ++ R NW+T + P++ ++ G
Sbjct: 217 VKKSEAEAAINAMNGQWLGS--RSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGG 274
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM-----TE 228
+TD ++++TF + + +++ +V D KGY F++F + ++ TE
Sbjct: 275 FTNGITDELIKKTF-SPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTE 327
Query: 229 MNGVLCST-------RPMRIGPAATKKA 249
+NG + P +GP A +A
Sbjct: 328 INGSIVKCFWGKENGDPNSVGPNANHQA 355
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQAL 327
+ N T++VG LD +V++D+L +F Q G + KI P FV+F N CA AL
Sbjct: 76 ESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 135
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNK 351
+ +N + ++++W SP N+
Sbjct: 136 AAMNKRSFLEKEMKVNWATSPGNQ 159
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 88/135 (65%), Gaps = 7/135 (5%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQA 326
+ D +N T++VGGLDP+V++D L+ F +Y +L VKIP GK+CGFVQF +RT AE+A
Sbjct: 40 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 98
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSNKQS--DQAQWNGGGYYGFAQGYEAYGYAPPTQDPNM 384
L LNG+ +G Q++RLSW RSPS+KQS D YYG Y YGYA P PNM
Sbjct: 99 LQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYG-TPFYGGYGYASPVPHPNM 157
Query: 385 Y---YGGFPGYGTYQ 396
Y YG +P YG Q
Sbjct: 158 YAAAYGTYPLYGNQQ 172
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E I +F G S K+I + N + Y F+EF H A L N
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGN--DPYCFVEFYEHRHAAASLAAMN 72
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F + +
Sbjct: 73 GRKIMGKE--VKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAF-GPFGRISD 128
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A Y+
Sbjct: 129 ARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYE 188
Query: 257 KATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
+ Q ++ P+N T++ GG+ +T+ +++ F +G ++ +++ K FV
Sbjct: 189 SNSKQLCFDDVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGPIMEIRVFPDKGYSFV 248
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+F + A A+ +NG+ + G ++ WG+
Sbjct: 249 RFNSHESAAHAIVSVNGSSIEGHVVKCYWGK 279
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + + FG G +V+++ T S+GYGF+ F + AE +Q
Sbjct: 102 VFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 161
Query: 136 NGTQMPSTEQNFRLNWA---------TYGAGERR--------QDDGPDFTIFVGDLAADV 178
G + + R NWA TY + ++ Q + T++ G ++ +
Sbjct: 162 GGQWLGG--RQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGGVSTGL 219
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + +V D KGY FVRF ++ +NG
Sbjct: 220 TEQLMRQTFSP-FGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNG 265
>gi|195035701|ref|XP_001989310.1| GH11659 [Drosophila grimshawi]
gi|193905310|gb|EDW04177.1| GH11659 [Drosophila grimshawi]
Length = 364
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL +DV DY L + F +
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNERE-----FSVWVGDLTSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 29/209 (13%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + FR + +++ ++ TG GY FV F + L +M +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 229 MNGV-LCSTRPM---RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+NG + T P+ R+ A+ G + + +++VG L
Sbjct: 68 LNGKHIPGTNPIVRFRLNSASNSFKLPGNERE------------------FSVWVGDLTS 109
Query: 285 SVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNG-TQLGG 337
V D L VF +Y + K+ K GFV+F + AL +NG LG
Sbjct: 110 DVDDYSLYKVFSSKYTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGT 169
Query: 338 QSIRLSWGRSPSNKQSDQAQWNGGGYYGF 366
+ I++ + + A NG YG+
Sbjct: 170 KPIKICNAVPKPKAELNAALGNGSNNYGY 198
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAM 65
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVLQE 185
NG ++ E ++NWAT + +++ F +FVGDL+ ++T ++
Sbjct: 66 NGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKA 123
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 124 AF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT 182
Query: 246 TKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ +
Sbjct: 183 RKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEI 242
Query: 305 KIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 243 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQQQNQIGY 301
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 138/275 (50%), Gaps = 24/275 (8%)
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQN 146
+ IF G K+I ++ N+ G YGF+E++ AAE LQT NG ++ TE
Sbjct: 2 LTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTE-- 57
Query: 147 FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
R+NWA Y + ++D + +FVGDL+ +V D VL + F A + ++ A+V+ D +G
Sbjct: 58 IRVNWA-YQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSA-FGTLSDARVMWDMNSG 115
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA--------TGQQYQKA 258
+S+GYGF+ F D+++ +++ MNG +R +R+ A K TG
Sbjct: 116 KSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAP 175
Query: 259 TYQNTQG------SQGENDPN-NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR 311
N QG S + P NTT++VG L P T L +F G L +++ A +
Sbjct: 176 APMNFQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRG 235
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
FV+ A A+ L G + G+ I+ SWG+
Sbjct: 236 FAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + + +A F G +V+ + + S GYGF+ F AE+ + T
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 136 NGTQMPSTEQNFRLNWA---TYG---AGERRQDDG-----------------------PD 166
NG + S + R+NWA T G AG R G P
Sbjct: 139 NGEWLGS--RAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVVQQTPA 196
Query: 167 F--TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+ T++VG+L T L F+++ + ++ DR G+ FV+
Sbjct: 197 YNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQADR------GFAFVKLDTHEHAAM 249
Query: 225 SMTEMNGVLCSTRPMRI 241
++ ++ G + RP++
Sbjct: 250 AIVQLQGQMVHGRPIKC 266
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----------- 242
+ ++V D T +SKGY FV F ++E ++ MN ++R +R
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 243 PAATKKAATGQQYQKATYQNTQGSQ--------GENDPNNTTIFVGGLDPSV-TDDILKT 293
P+ G +GSQ ++ P NTT++ GG P+V +DD++
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F Q+G + V++ K F++F + A A+ + +++ G ++ WG+
Sbjct: 241 HFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 293
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN L + +++ + + G+Q + D ++ IFVG
Sbjct: 58 ATTALTAMNKRLFLEKEIKVN-----------------WATSPGNQPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +N
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQW 160
Query: 335 LGGQSIRLSW 344
+ +SIR +W
Sbjct: 161 IASRSIRTNW 170
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q N + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNRQWIAS--RSIRTNWST 172
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 61/345 (17%)
Query: 59 TQPY---GVAPDASSDGIRS--LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
TQPY G+ P ++ + L++G+L P + + + IF G V+ K+I+++ NF
Sbjct: 4 TQPYSTFGLTPGNHAEAPKKPHLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDR--NF 61
Query: 114 SEG---YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
YGF+E++ +AE+ +QT NG ++ E + ++D +F
Sbjct: 62 QHAGFNYGFVEYIDMRSAEQAIQTLNGRKIFDAE-----------VKQNKEDTQHHHHVF 110
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+ +V D VL + F A + S+ A+V+ D +G+S+GYGF+ F + +++ MN
Sbjct: 111 VGDLSPEVNDDVLAKAFGA-FGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTMN 169
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND------------------- 271
G +R +R+ A +K TG ++ T S G
Sbjct: 170 GEWLGSRAIRVN-WANQKTQTGSSGAYSSPSYTAPSYGHYPQLTSSPTPAAPIAPLAPVI 228
Query: 272 ------------------PNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
P+N T+FVG L P VT L +F YG + +++ A +
Sbjct: 229 PGVPPAGGVPAASATPVIPDNCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYA 288
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
FV+ A A++ L T + G+ +++ WGR ++ QA W
Sbjct: 289 FVKLDTSQAAVSAMATLQNTMVQGRPLKIQWGREKP-AEAAQAGW 332
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 29/307 (9%)
Query: 53 PPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
PP + + P S RS+++G++ P + E + +F TG K+IR ++++
Sbjct: 33 PPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS 92
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
YGF+++ +A + T NG + Q ++NWA A +R+D + IFVG
Sbjct: 93 ----YGFVDYFDRRSAALSIVTLNGRHL--FGQPIKVNWAY--ASSQREDTSGHYNIFVG 144
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
DL+ +VTD L F +VY S A+V+ D+ TGRS+G+GFV F ++ E ++ ++NG
Sbjct: 145 DLSPEVTDATLFACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGR 203
Query: 233 LCSTRPMRIGPAATKKAATGQQYQ-----KATYQNTQGSQG-----------ENDPNNTT 276
+R +R A K A G + + K+ + T G+ EN+ TT
Sbjct: 204 WLGSRQIRCNWAT--KGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTT 261
Query: 277 IFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
++VG L P VT L F G + V++ K GFV+++ A A+ + N
Sbjct: 262 VYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARI 321
Query: 335 LGGQSIR 341
L G+ I+
Sbjct: 322 LCGKPIK 328
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 37/252 (14%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 120 PIKVNWAYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRS 179
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG----------------- 157
G+GF+ F + A+ + NG + S + R NWAT GAG
Sbjct: 180 RGFGFVSFRNQQEAQSAINDLNGRWLGS--RQIRCNWATKGAGGNEDKPNSDAKSVVELT 237
Query: 158 --------ERRQDDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
++ D+ P+ T++VG+LA +VT L F A+ GA + D
Sbjct: 238 NGTSEDGKDKSNDEAPENNLQYTTVYVGNLAPEVTSVDLHRHFHAL-----GAGAIEDVR 292
Query: 205 TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQ 264
R KG+GFVR+ +E ++ N + +P++ G ++ T Y Q T
Sbjct: 293 VQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKKGCPRLRQKTTPSLYMVLMGQQTY 352
Query: 265 GSQGENDPNNTT 276
S+ + P++ T
Sbjct: 353 SSRDKLHPSSPT 364
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VT+ +LQE F + ++G K++ + YGFV + D S+
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSST-GPLEGCKLIRKEKSS----YGFVDYFDRRSAALSIV 109
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A SQ E+ + IFVG L P VT
Sbjct: 110 TLNGRHLFGQPIKVNWAYAS------------------SQREDTSGHYNIFVGDLSPEVT 151
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 152 DATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWLGSRQIR 211
Query: 342 LSWG 345
+W
Sbjct: 212 CNWA 215
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + P VT+ +L+ VF G L K+ ++ GFV + +R A ++ LNG
Sbjct: 55 SVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGR 114
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + S ++ +N
Sbjct: 115 HLFGQPIKVNWAYASSQREDTSGHYN 140
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 16/298 (5%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 247 KKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
+ K FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 236 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 293
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P + V+ S D +++GDL P + I + F G +
Sbjct: 69 VNWATTPSSQKKDTSSSTVVSTQRSQDHFH-VFVGDLSPEITTEDIKAAFAPFGRISDAR 127
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA---------TYG 155
V+++ T S+GYGF+ F + AE +Q G + + R NWA TY
Sbjct: 128 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ--IRTNWATRKPPAPKSTYE 185
Query: 156 AGERR--------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
+ ++ Q + T++ G + + +T+ ++++TF + + + +V D
Sbjct: 186 SNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD----- 239
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ +NG
Sbjct: 240 -KGYSFVRFNSHESAAHAIVSVNG 262
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIR-NKQTNF-SEGYGFIEFVSHAAAERVL 132
++++G+L + ++ + IF G+ VS K+I K NF + YGF+EF AE+ +
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGER------RQDDGPDFTIFVGDLAADVTDYVLQET 186
Q NG ++ + E R NWA A ++D F +FVGDLAA++ D L +
Sbjct: 79 QDMNGRKIFNYE--IRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQA 136
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F + + ++ A V+ D +G+S+G+GFV F D+++ R++ MNG TRP+R AT
Sbjct: 137 F-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCN-WAT 194
Query: 247 KKAAT-------GQQY-QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+K T GQQ + Q T T+I+VG + +V+ + L F ++
Sbjct: 195 QKGQTAMPAPQPGQQLPYEVVVQQTPAYV-------TSIYVGNIPLNVSQNDLVQPFQRF 247
Query: 299 GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
G + VK A + FV+ A A+ L + G +LSWG+
Sbjct: 248 GYVQEVKFQADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKLSWGK 295
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR--SKGYGFVRFGDESEQ 222
P TI+VG+L VTD +L E F V V K+++ R + YGFV F D
Sbjct: 16 PATTIYVGNLDQRVTDTMLNEIFTTV-GQVVSVKIISVRKHNNFGAVNYGFVEFADPRVA 74
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
+++ +MNG +R A + +A + T ++T N+ +FVG L
Sbjct: 75 EQAIQDMNGRKIFNYEIRANWA--QPSANINPPLQMTKEDT--------TNHFHVFVGDL 124
Query: 283 DPSVTDDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANRTCAEQALSVLNGTQLG 336
+ D+ L F ++G + + +GK GFV F ++T AE+A++ +NG LG
Sbjct: 125 AAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLG 184
Query: 337 GQSIRLSWG 345
+ IR +W
Sbjct: 185 TRPIRCNWA 193
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--------GFVQFANRTCAEQA 326
TTI+VG LD VTD +L +F G++V VKI + ++ GFV+FA+ AEQA
Sbjct: 18 TTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQA 77
Query: 327 LSVLNGTQLGGQSIRLSWGRSPSN 350
+ +NG ++ IR +W + +N
Sbjct: 78 IQDMNGRKIFNYEIRANWAQPSAN 101
>gi|47207834|emb|CAF95099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ +LW+G+L +M+E +I F GE VS ++IRNK T + GY F+E A AER
Sbjct: 1 MSTLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERC 60
Query: 132 LQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P S F+LN AT+G +QD G +++FVGDL +V D +L E F
Sbjct: 61 LRKINGKSLPGASPPTRFKLNRATFG----KQDVGQMYSLFVGDLTPEVDDGMLYEFFYN 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAAT 246
Y S +G KVV D + G SKG GFV+F DE Q R++ E G + + +R+ AA
Sbjct: 117 RYPSCRGGKVVLD-SMGNSKGCGFVQFPDERLQKRALDECQGAMGLGGKALRLSLAAN 173
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++G+L + + + + F + +++ ++ TG + GY FV DE+ R +
Sbjct: 3 TLWMGNLDSYMDEKFITRAFSTMGEQAVSVRIIRNKMTGGAMGYCFVEMSDEATAERCLR 62
Query: 228 EMNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++NG L P ++ A K GQ Y ++FVG L
Sbjct: 63 KINGKSLPGASPPTRFKLNRATFGKQDVGQMY--------------------SLFVGDLT 102
Query: 284 PSVTDDILKTVF-GQY-----GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
P V D +L F +Y G++V + K CGFVQF + ++AL G LG
Sbjct: 103 PEVDDGMLYEFFYNRYPSCRGGKVVLDSMGNSKGCGFVQFPDERLQKRALDECQGAMGLG 162
Query: 337 GQSIRLS 343
G+++RLS
Sbjct: 163 GKALRLS 169
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 150/314 (47%), Gaps = 26/314 (8%)
Query: 67 DASSDG-IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--------- 116
D DG R+L++G+L + E I +F G S K+I + G
Sbjct: 38 DMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMP 97
Query: 117 ------YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
Y F+EF H A L NG ++ E ++NWAT + +++ D F +F
Sbjct: 98 NANNDPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVF 154
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
VGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M
Sbjct: 155 VGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 213
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDD 289
G R +R A K A + T Q + ++ N T++ GG+ +++
Sbjct: 214 GQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYCGGIGAGLSEQ 273
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR--- 346
+++ FG +G+++ +++ K F++F+ A A+ +NGT + G ++ WG+
Sbjct: 274 LMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETP 333
Query: 347 --SPSNKQSDQAQW 358
+ + +Q D +QW
Sbjct: 334 DMTKNFQQVDYSQW 347
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 21/113 (18%)
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCG------- 313
G E+D T++VG L VT+ ++ +F Q G K+ G+R G
Sbjct: 36 GCDMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPV 95
Query: 314 ----------FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
FV+F A AL+ +NG ++ G+ ++++W +PS+++ D +
Sbjct: 96 MPNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTS 148
>gi|442760033|gb|JAA72175.1| Putative trna selenocysteine 1-associated protein 1 [Ixodes
ricinus]
Length = 226
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 28/215 (13%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
+LW+GDL+P M+E ++ F GE V K+IRN+ T GYGF++F AA+R L
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 134 TFNGTQMPSTEQ--NFRLNWATYGAGER------------------RQDDGP--DFTIFV 171
NG +P+ Q FRLN A G G RQ G +F++FV
Sbjct: 67 RCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEFSMFV 126
Query: 172 GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-N 230
GDL+++V D L F Y SVK AKVV D+ +G SKG+GFVRF DESE ++ +M +
Sbjct: 127 GDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQ-SGLSKGFGFVRFSDESEYQEALVDMQH 185
Query: 231 GVLCSTRPMRIGPAATKKAATGQ---QYQKATYQN 262
+L ++P+R+G A ++ A G+ Q+ Y+N
Sbjct: 186 SLLVGSKPIRVGVANPRRVADGRVGGDGQRVFYRN 220
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GDL + +Y +Q+ F + + K++ +R TG +GYGF+ FGDE R++
Sbjct: 7 TLWMGDLEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALL 66
Query: 228 EMNG--VLCSTRP--MRIGPAATKKAATGQQYQKATYQNTQGS----QGENDPNNTTIFV 279
NG + +T+P R+ A G S Q + ++FV
Sbjct: 67 RCNGRPIPNATQPKTFRLNHANNGTGTGGGGGGGGGGSYGNYSSGGRQQYGSSSEFSMFV 126
Query: 280 GGLDPSVTDDILKTVFGQ-YGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGT 333
G L V D L F Q Y + K+ K GFV+F++ + ++AL + +
Sbjct: 127 GDLSSEVDDGHLYHAFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSDESEYQEALVDMQHS 186
Query: 334 QL-GGQSIRL 342
L G + IR+
Sbjct: 187 LLVGSKPIRV 196
>gi|300175779|emb|CBK21322.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+LWIGD+Q E Y+ ++ + S K++R++ TN S G+GFI+F + A L
Sbjct: 3 RTLWIGDVQENWTEDYLCALMRNAKGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+NG +P T FRLN +G R + G ++ +++GDL + VTD L FR Y S
Sbjct: 63 GYNGRPIPGTGYTFRLN---FGGNSRNLNLGDNYCLYIGDLESSVTDTQLYTIFRDKYLS 119
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
GAK++ + T SKGYGF++F E ++ EMNG + + RP+++ AA ++
Sbjct: 120 FCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPIKLSYAAARR 174
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 25/185 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
T+++GD+ + T+ L R + K++ DRTT S G+GF+ F E + + ++
Sbjct: 4 TLWIGDVQENWTEDYLCALMRNA-KGLSSIKLMRDRTTNESLGFGFIDFATEEDAIHALN 62
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
NG RP+ TG ++ N S+ N +N +++G L+ SVT
Sbjct: 63 GYNG-----RPI---------PGTGYTFRLNFGGN---SRNLNLGDNYCLYIGDLESSVT 105
Query: 288 DDILKTVF-GQYGELVHVKI------PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
D L T+F +Y KI K GF+QF R AE AL +NG + G+ I
Sbjct: 106 DTQLYTIFRDKYLSFCGAKIMRETGTSVSKGYGFIQFRARDEAETALKEMNGYVINGRPI 165
Query: 341 RLSWG 345
+LS+
Sbjct: 166 KLSYA 170
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 16/298 (5%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +F G + K+I + N + Y F+EF H A L N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVLQET 186
G ++ E ++NWAT + +++ Q F +FVGDL+ ++T ++
Sbjct: 59 GRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A
Sbjct: 117 F-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 175
Query: 247 KKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++ ++
Sbjct: 176 KPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIR 235
Query: 306 IPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
+ K FV+F + A A+ +NGT + G ++ WG+ + + Q N GY
Sbjct: 236 VFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGY 293
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P + V+ S D +++GDL P + I + F G +
Sbjct: 69 VNWATTPSSQKKDTSSSTVVSTQRSQDHFH-VFVGDLSPEITTEDIKAAFAPFGRISDAR 127
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWA---------TYG 155
V+++ T S+GYGF+ F + AE +Q G + + R NWA TY
Sbjct: 128 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ--IRTNWATRKPPAPKSTYE 185
Query: 156 AGERR--------QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
+ ++ Q + T++ G + + +T+ ++++TF + + + +V D
Sbjct: 186 SNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTF-SPFGQIMEIRVFPD----- 239
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ +NG
Sbjct: 240 -KGYSFVRFNSHESAAHAIVSVNG 262
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 22/291 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + + IF G KV+ ++ T S G+GF++F A R ++
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 135 FNGTQMPSTEQNFRLNWATYGAGE-----RRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+G ++ Q R++WA GAG + +D TIFVG+L DV + L + F +
Sbjct: 74 MHGRRVYG--QEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSS 131
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
+SSV GAK+ D TG GYGFV F ++ + +M M G + S R +RI A K A
Sbjct: 132 -FSSVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGKNA 190
Query: 250 ATGQQYQKATYQ-------NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A G + + Q + DP N +++V GL + ++ F +G++
Sbjct: 191 ARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNVSVYVRGLPSDIDVAAIRESFRGFGDIE 250
Query: 303 HVKIPAGKRC-------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
VKIP R FV+F + A +A+ ++G ++ G ++ WGR
Sbjct: 251 DVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHDMHGKEIAGCVVQCEWGR 301
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query: 64 VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFV 123
+ D + ++++G+L P ++E + F K+ ++ +T GYGF+ F
Sbjct: 99 ILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFR 158
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGER-----------------------R 160
A+ +QT G + + R++WA R +
Sbjct: 159 EKKDADLAMQTMTGYILSG--RALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMK 216
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV-VTDRTTGRSKGYGFVRFGDE 219
Q D + +++V L +D+ ++E+FR + ++ K+ R T + + Y FV+F
Sbjct: 217 QTDPLNVSVYVRGLPSDIDVAAIRESFRG-FGDIEDVKIPDAARMTAQDRIYAFVKFKSH 275
Query: 220 SEQLRSMTEMNG 231
R++ +M+G
Sbjct: 276 EVAARAIHDMHG 287
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 265 GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFA 318
G G P+ +++VG LDP V ++L+ +F G + K+ + G FV F
Sbjct: 3 GGSGIYQPSGMSLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFY 62
Query: 319 NRTCAEQALSVLNGTQLGGQSIRLSW 344
+R A +A+ +++G ++ GQ IR+ W
Sbjct: 63 DRPTAIRAMELMHGRRVYGQEIRIDW 88
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ F +FVGDL+ ++T +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMINPIQQQNQVG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 142/297 (47%), Gaps = 33/297 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAATTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG--------PAA 245
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 246 TKKAATG---------------QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDD 289
+ KA + Q+ T++ ++ P NTT++ GG P+V +DD
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISDD 237
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
++ F Q+G + V++ K F++F + A +A+ + +++ G ++ WG+
Sbjct: 238 LMHKHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGK 294
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRCGFVQFANRTCAEQALSVLNG 332
T++VG LD SV++D+L +FG+ G + KI P F++++N A AL+ +N
Sbjct: 8 TLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Query: 333 TQLGGQSIRLSWGRSPSNK 351
+ I+++W SP N+
Sbjct: 68 RVFLEKEIKVNWATSPGNQ 86
>gi|195117982|ref|XP_002003519.1| GI17961 [Drosophila mojavensis]
gi|193914094|gb|EDW12961.1| GI17961 [Drosophila mojavensis]
Length = 346
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 17/293 (5%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+ DG R+L++G+L + E + ++FG G K+IR S+ Y F+EF A
Sbjct: 4 ECLEDGPRTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGA---SDPYCFVEFAHPA 60
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGER---------RQDDGPDFTIFVGDLAAD 177
+A L N E ++NWA+ G + D IFVGDL+ D
Sbjct: 61 SAAAALTAMNKRICLGKE--MKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPD 118
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+T L+ F + + KVV D T +SKGYGFV F ++++ ++ +MNG +R
Sbjct: 119 ITTETLKNVF-VPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSR 177
Query: 238 PMRIGPAATKKAA-TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+R AA K A + N + + P N T++ GGL S ++I++ F
Sbjct: 178 AIRTNWAARKPPAPYSKDTSNVNKLNFEDVYRQASPRNFTVYCGGLINS-DENIIRQTFS 236
Query: 297 QYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
+G ++ ++ K FV+F N+ A A+ L+G+ + GQS++ SWG+ +
Sbjct: 237 PFGRILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKEST 289
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 45 VGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGK 104
V W P PD S +++GDL P + + ++F GE K
Sbjct: 81 VNWASSPGGSSDSVVHHNLPKPDTSQH--HHIFVGDLSPDITTETLKNVFVPFGEISDYK 138
Query: 105 VIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWAT------YGAGE 158
V+++ TN S+GYGF+ FV A+ ++ NG + S + R NWA Y
Sbjct: 139 VVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGS--RAIRTNWAARKPPAPYSKDT 196
Query: 159 R-----------RQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
RQ +FT++ G L + + ++++TF +++ R R
Sbjct: 197 SNVNKLNFEDVYRQASPRNFTVYCGGL-INSDENIIRQTFSPF------GRILEIRYF-R 248
Query: 208 SKGYGFVRFGDESEQLRSMTEMNG 231
KGY FVRF ++ ++ ++G
Sbjct: 249 DKGYAFVRFDNKESACNAIVALHG 272
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 128/264 (48%), Gaps = 54/264 (20%)
Query: 33 QQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIAS 92
Q+QQHQ TP V P Q Q +P+++ +LW G+L+PWM+E Y
Sbjct: 198 QRQQHQP--------TPLSVQLPPAQPQSLS-SPNSAPSARTTLWWGELEPWMDEEYAKQ 248
Query: 93 IFGHTG-EFVSGKV-------IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ----M 140
+ G + V KV I +Q N + GY F+ F + + A VLQ N + M
Sbjct: 249 VCTLMGWDPVGIKVPRPAPDAITGQQAN-NPGYCFLTFPTQSHAASVLQQVNTSNAPLIM 307
Query: 141 PSTEQNFRLNWATYGAGERRQDDGP----------------DFTIFVGDLAADVTDYVLQ 184
P++ + F LNWA+ P +++IFVGDLA +V++ L
Sbjct: 308 PNSAKQFSLNWASSVPSAPLPAAMPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLV 367
Query: 185 ETFR---------------AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
FR + S K AK++ D TG S+GYGFVRF DES+Q R++ EM
Sbjct: 368 AVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDESDQQRALIEM 427
Query: 230 NGVLCSTRPMRIGPAATK-KAATG 252
+G+ C +RPMRI PA K K A G
Sbjct: 428 HGLYCLSRPMRISPATAKFKPAPG 451
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P + +D L+T F +GE+ +VK+P GK C
Sbjct: 598 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHC 657
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 658 GFVQFVRKPDAERAIEKMQGFPIGGSRIRLSWGRS 692
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + +
Sbjct: 39 SLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIDQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F Q+G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + N A +A+ LN + L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYENHEDAVKAVEALNESDLNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 134/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + + ++++ +N + + +G A
Sbjct: 237 EMF-AQFGPIVSASLEKD-ADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + +H A + ++
Sbjct: 220 NLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKL-KGFGFVNYENHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N + + + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ AKV+ G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVMRSEN-GKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 396
Query: 244 AATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 397 AQRKDVRRSQLAQQIQARN 415
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+P+V++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIDQLNYTPIKGRLCRIMWSQRDPS 119
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 186
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 187 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 245
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + +T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 246 RQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 305
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 306 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 365
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 366 QQVDYSQW 373
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 179 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 238
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 239 GGQWLGGRQ--IRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGL 296
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 297 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 342
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 16/303 (5%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G ++G+L + E+ I +F G + K+I + N + Y F+EF H A
Sbjct: 19 GKEGKYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFYEHRHAAAA 76
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP----------DFTIFVGDLAADVTDY 181
L NG ++ E ++NWAT + +++ F +FVGDL+ ++T
Sbjct: 77 LAAMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTE 134
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
++ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 135 DIKAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT 193
Query: 242 GPAATKKAATGQQYQKATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+
Sbjct: 194 NWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQ 253
Query: 301 LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNG 360
++ +++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N
Sbjct: 254 IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMLNPVQQQNQ 313
Query: 361 GGY 363
GY
Sbjct: 314 IGY 316
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ++ + +F G+ VS +V R+ + S GYG++ F + A R L
Sbjct: 29 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 88
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 89 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDRAIDHKALHDTF-STFGNI 142
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP +K
Sbjct: 143 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-FLRKQEREST 200
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
KA + N +FV L S TDD LK VFG++G + V ++ GK
Sbjct: 201 ADKAKFNN--------------VFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKS 246
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+C GFV F N A +A+ LNG + + + + S ++++ Q
Sbjct: 247 KCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQ 294
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 153/339 (45%), Gaps = 31/339 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F +
Sbjct: 108 PSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQ-SKGYGFVQFDNE 166
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A++ ++ NG + + +Q + + E D +FV +L+ TD L+
Sbjct: 167 ESAQKAIEKLNGMLL-NDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKN 225
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + ++ A V+ D G+SK +GFV F + + R++ +NG + +G A
Sbjct: 226 VF-GEFGTITSAVVMRD-GDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQ 283
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + Q+++++ + QG N ++V LD S+ DD LK +F +G +
Sbjct: 284 KKSERENELKQRFEQSMKEAADKYQGAN------LYVKNLDDSLGDDKLKELFSPFGTIT 337
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F+ A +AL +NG + + + ++ + ++++ QA
Sbjct: 338 SCKVMRDPNGISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQA 397
Query: 357 QWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYG 393
Q+ G PP+ P MY G PG G
Sbjct: 398 QFAQMRPVGM----------PPSVGPRVPMYPPGGPGIG 426
>gi|389612022|dbj|BAM19544.1| tRNA selenocysteine associated protein secp43, partial [Papilio
xuthus]
Length = 295
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A +
Sbjct: 7 LWMGSLEPNMTESFIMAAFHRMGQRPLTVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 66
Query: 135 FNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ A Q + +F+++VGDL+ DV DY L F + YS
Sbjct: 67 LNGKPIPGTFPVVRFRLNTASREARSNLQQER-EFSVWVGDLSPDVDDYSLYRVFASKYS 125
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D TG +KGYGFVRFG+E EQ ++ MNG T+P++I A K
Sbjct: 126 SIKTAKVILD-GTGYTKGYGFVRFGNEEEQRNALYAMNGYSGLGTKPLKICTAVPK 180
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L ++T+ + F + KV+ ++ TG GY FV F + E + +M +
Sbjct: 7 LWMGSLEPNMTESFIMAAFHRMGQRPLTVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 66
Query: 229 MNGV-LCSTRPM---RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+NG + T P+ R+ A+ + + QQ ++ +++VG L P
Sbjct: 67 LNGKPIPGTFPVVRFRLNTASREARSNLQQERE-----------------FSVWVGDLSP 109
Query: 285 SVTDDILKTVFG-QYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNG-TQLGG 337
V D L VF +Y + K+ K GFV+F N AL +NG + LG
Sbjct: 110 DVDDYSLYRVFASKYSSIKTAKVILDGTGYTKGYGFVRFGNEEEQRNALYAMNGYSGLGT 169
Query: 338 QSIRLSWGR-----SPSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGY 392
+ +++ +N+ S + + Y +Q Y Y DP+ Y+ + +
Sbjct: 170 KPLKICTAVPKPKGVTTNQNSTTSVTSNAAYNNGSQEYNQY------YDPSAYWQNYSAW 223
Query: 393 GTY 395
Y
Sbjct: 224 SGY 226
>gi|157131106|ref|XP_001655804.1| tRNA selenocysteine associated protein (secp43) [Aedes aegypti]
gi|108871647|gb|EAT35872.1| AAEL011988-PA [Aedes aegypti]
Length = 318
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + K++RNK T GY F+ F + AA +
Sbjct: 8 LWMGSLESYMTENFILAAFRKMGEDPQTVKLMRNKYTGDPAGYCFVSFKTDEAAIDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN AT + D +F+++VGDL++DV DY L F A Y+
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQNKALLADR-EFSVWVGDLSSDVDDYSLYRVFSAKYT 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D ++G SKGYGFV+FG E EQ ++ EMNG + +P++I A K
Sbjct: 127 SIKTAKVILD-SSGFSKGYGFVKFGLEDEQKSALYEMNGFIGLGCKPLKICNAVPK 181
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 151/297 (50%), Gaps = 32/297 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
RS+++G++ + E + +F TG K+ R ++++ YGFI + +A +
Sbjct: 23 CRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAALAI 78
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T NG + Q ++NWA Y +G+R +D + IFVGDL+ +VTD L F +VY
Sbjct: 79 LTLNGRHLFG--QPIKVNWA-YASGQR-EDTSGHYNIFVGDLSPEVTDATLFACF-SVYQ 133
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S A+V+ D+ TGRS+G+GFV F + + ++ ++ G +R +R ATK A
Sbjct: 134 SCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCN-WATKGAGGI 192
Query: 253 QQYQ----KATYQNTQGSQG-----------ENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
++ Q K+ + T GS EN+P TT++VG L T L F
Sbjct: 193 EEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHA 252
Query: 298 YGELV--HVKIPAGKRCGFVQFANRTCAEQALSVLNG---TQLGGQSIRLSWGRSPS 349
G V V++ K GFV+++ T AE AL++ G + L G+ I+ SWG P+
Sbjct: 253 LGAGVIEEVRVQRDKGFGFVRYS--THAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 307
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 90 PIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRS 149
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAG--ERRQ----------- 161
G+GF+ F S A+ + G + S + R NWAT GAG E +Q
Sbjct: 150 RGFGFVSFRSQQDAQSAINDLTGKWLGS--RQIRCNWATKGAGGIEEKQNSDSKSVVELT 207
Query: 162 ----DDGPDF-------------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRT 204
+DG + T++VG+L ++ T L F A+ GA V+ +
Sbjct: 208 NGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHAL-----GAGVIEEVR 262
Query: 205 TGRSKGYGFVRFGDESE 221
R KG+GFVR+ +E
Sbjct: 263 VQRDKGFGFVRYSTHAE 279
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 271 DPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQAL 327
DP+ +++VG + VT+ +L+ VF G + K+ ++ GF+ + +R A A+
Sbjct: 19 DPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAI 78
Query: 328 SVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWN 359
LNG L GQ I+++W + ++ +N
Sbjct: 79 LTLNGRHLFGQPIKVNWAYASGQREDTSGHYN 110
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 141/284 (49%), Gaps = 29/284 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP+ T P A A+ G SL++GDL P + +S + F G+ VS +V R+ T
Sbjct: 22 PPAMVTGPGAAA--AAQFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRR 79
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GYG++ F S A R +Q N +P + R+ ++ RR G IF+ +
Sbjct: 80 SLGYGYVNFTSPQDAARAIQELN--YIPLNGKPVRVMYSHRDPSVRRSGAG---NIFIKN 134
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + L +TF +V+ ++ KV D ++G+SKGYGFV++ E ++M ++NG+L
Sbjct: 135 LDKSIDHKALHDTF-SVFGNIISCKVAVD-SSGQSKGYGFVQYETEESAQKAMGQLNGML 192
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
+ + + +GP + + +++ G N T ++V L S TDD LK
Sbjct: 193 LNDKQVYVGP-----------FLRRQERDSTG----NKTIFTNVYVKNLAESTTDDDLKN 237
Query: 294 VFGQYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNG 332
+FG++G++ + K GFV F N A +A+ LNG
Sbjct: 238 IFGEFGKITSAVVMKDGEGKPKGFGFVNFENADDAAKAVESLNG 281
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF+++ +
Sbjct: 120 PSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCKVAVDSSGQ-SKGYGFVQYETE 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIF----VGDLAADVT 179
+A++ + NG + + G RRQ D + TIF V +LA T
Sbjct: 179 ESAQKAMGQLNGMLLNDKQ-------VYVGPFLRRQERDSTGNKTIFTNVYVKNLAESTT 231
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + + A V+ D G+ KG+GFV F + + +++ +NG +
Sbjct: 232 DDDLKNIF-GEFGKITSAVVMKD-GEGKPKGFGFVNFENADDAAKAVESLNGKTFDDKEW 289
Query: 240 RIGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + QY+++ + Q N ++V LD SV+D+ LK +F
Sbjct: 290 FVGRAQKKSEREMELKVQYEQSLKEAADKFQSSN------LYVKNLDDSVSDEKLKELFT 343
Query: 297 QYGELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
YG + K+ P G + GFV F+ A +A+S ++G + + + ++ + ++
Sbjct: 344 PYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAVAQRKEDR 403
Query: 352 QSD-QAQWN 359
++ QAQ++
Sbjct: 404 RARLQAQFS 412
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 7/278 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L + E+ I +FG G S K+I + T + Y F+EF H A + N
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G ++ E ++NWAT +++ D F +FVGDL+ ++T ++ F + +
Sbjct: 59 GRKILGKE--VKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAF-GPFGKISD 114
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 115 CRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNET 174
Query: 257 KATYQNT-QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
T Q + ++ P+N T++ GG+ +T+ I++ F +G ++ +++ K FV
Sbjct: 175 TNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPDKGYSFV 234
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+F + A A+ +NGT + G ++ WG+ ++ S
Sbjct: 235 RFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETTDMVS 272
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I + FG G+ +V+++ T S+GYGF+ F + AE +Q
Sbjct: 88 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 136 NGTQMPSTEQNFRLNWATYGAGER-----------------RQDDGPDFTIFVGDLAADV 178
G + + R NWAT + Q + T++ G + +
Sbjct: 148 GGQWLGG--RQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGL 205
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
T+ ++++TF + + + +V D KGY FVRF ++ +NG
Sbjct: 206 TEQIMRQTF-SPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNG 251
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVI--------RNKQTNFS-------EGYG 118
++L++G+L + E I +F G S K+I N FS + Y
Sbjct: 8 KTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSSNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFFEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D TTG+SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKAAF-APFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + Q + ++ P N T++ GG+ +++ +++ F
Sbjct: 184 IRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSP 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+G+++ +++ K F++F++ A A+ +NGT + ++ WG+
Sbjct: 244 FGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGK 292
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 43/219 (19%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+D+ T++VG+L+ DVT+ ++ + F + K K++T++ R
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQI-GPCKSCKMITEQPDSRRMNSSVGFSVLQQ 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 SSNDPYCFVEFFEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGR----SPSNKQSD 354
+ AE A+ + G LGG+ IR +W +P N Q +
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKNVQDN 202
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 16/301 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I +T ++ Y F+EF A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIM--ETAGNDPYCFVEFHDDRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG + E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 65 AMNGRKKMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 122
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 123 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 181
Query: 244 AATKKAATGQQYQKATYQNTQGSQ-GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
A K A Y+ T Q + ++ P+N T++ GG+ +T+ +++ F +G+++
Sbjct: 182 ATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIM 241
Query: 303 HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGG 362
+++ K FV+F + A A+ +NGT + G ++ WG+ + + Q N G
Sbjct: 242 EIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIG 301
Query: 363 Y 363
Y
Sbjct: 302 Y 302
>gi|193636741|ref|XP_001950659.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Acyrthosiphon pisum]
Length = 348
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 17/208 (8%)
Query: 52 VPPPSQQTQPYGVAPDA--------SSDG--IRSLWIGDLQPWMEESYIASIFGHTGEFV 101
VPPP+Q + ++P+ S+ G + SLW+G L+P+M ES+I F GE+
Sbjct: 40 VPPPTQTATTF-ISPNVPPVQQPQVSTPGQNVTSLWMGSLEPYMTESFITGAFQKMGEYP 98
Query: 102 SG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
K++RNK T + GY F++F + ++ NG +P T R G +
Sbjct: 99 KNVKLMRNKNTGETAGYAFVDFYDPVS---IMHKLNGKYIPGTNPPVRFKLNHAGNPGKI 155
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
DF++++G+L++DV DY L +TF Y S++ AKVV D + G SKGYGF+RF E
Sbjct: 156 TTSDKDFSVWLGELSSDVDDYQLYKTFACRYQSIRTAKVVLD-SAGYSKGYGFIRFSSEE 214
Query: 221 EQLRSMTEMNGVL-CSTRPMRIGPAATK 247
EQ + MNG T+P+++ K
Sbjct: 215 EQKHCLNNMNGFPGLGTKPIKVSSVIPK 242
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 23/292 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K + + ++ + +
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNDTIT---ALLNLMTLVRLRGLCK 147
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
+ S R+NWA ++D F IFVGDL+ +V D +L + F A + S
Sbjct: 148 PSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSA-FGS 206
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + ++ +++ M+G +R +R A K +
Sbjct: 207 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSIS 266
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 267 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVPL 326
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G ++ ++ A + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 327 FHNFGYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 378
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 25/277 (9%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+S+ + SL++G+L P + ES + F G S +V R+ T S GYG++ F S AA
Sbjct: 47 ASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAG 106
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER L+ N ++ RL W+ RR G IF+ +L + + L +TF
Sbjct: 107 ERALEELNYAEIKGVR--CRLMWSQRDPSLRRSGSG---NIFIKNLDPAIENKTLHDTFS 161
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ + V KV TD G SKG+GFV + + ++ +NG+L + R + +GP KK
Sbjct: 162 S-FGKVLSCKVATDE-NGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKK 219
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL--VHVKI 306
+++ +Q E N T +FV D T+D L+ +F YG + +H+++
Sbjct: 220 D------RESRFQ-------EMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQV 266
Query: 307 PA---GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ K GFV FA A +A+ LN + G+ +
Sbjct: 267 DSEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPL 303
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P +E + F G+ +S KV ++ N S+G+GF+ + S
Sbjct: 132 PSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGN-SKGFGFVHYESD 190
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ ++ NG + E + A R Q+ ++T +FV + + T+ L+
Sbjct: 191 EAAQAAIENINGMLLNGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELR 250
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F + Y + + D + G +KG+GFV F + + ++++ +N +P+ +G A
Sbjct: 251 ELFES-YGPITSIHLQVD-SEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRA 308
Query: 245 ATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +Y+ + Q Q N +F+ LD S+ D L+ F +G +
Sbjct: 309 QKKNERVHELTKKYEADRLEKLQKYQSVN------LFIKNLDESIDDARLEEEFKPFGTI 362
Query: 302 VHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ + GFV + A +A+S +N + + + ++ + + ++S A
Sbjct: 363 TSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVALAQPKAIRRSQLA 422
Query: 357 Q 357
Q
Sbjct: 423 Q 423
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMP--------STEQNFRLNWATYGAGERRQDDGP 165
++G+GF+ F H A + ++ N + + ++N R++ T R +
Sbjct: 272 NKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQ 331
Query: 166 DF---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+ +F+ +L + D L+E F+ + ++ AKV+ D G+S+G+GFV E
Sbjct: 332 KYQSVNLFIKNLDESIDDARLEEEFKP-FGTITSAKVMLDEN-GKSRGFGFVCLSTPEEA 389
Query: 223 LRSMTEMNGVLCSTRPMRIG---PAATKKAATGQQYQKATYQNTQGSQGENDPN 273
++++EMN + + +P+ + P A +++ QQ Q Q G PN
Sbjct: 390 TKAISEMNQRMVANKPLYVALAQPKAIRRSQLAQQIQARNQMRMQQQAGPGIPN 443
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 243 PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
PA + +AA +++ +TQ S+ +++VG LDP+VT+ L F G +
Sbjct: 30 PATSTEAA-----EESNESSTQASE-----TLASLYVGELDPTVTESDLYEFFSPIGSVN 79
Query: 303 HVKI---PAGKRC---GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+++ KR G+V F ++ E+AL LN ++ G RL W R PS ++S
Sbjct: 80 SIRVCRDAVTKRSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMWSQRDPSLRRS 137
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 141/297 (47%), Gaps = 31/297 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKAT------------------YQNTQGSQGE-----NDPNNTTIFVGGLDPSV-TDD 289
+ K+ +N Q E + P NTT++ GG P V +D+
Sbjct: 180 ESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDE 239
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
++ F Q+G + V++ K F++F + A +A+ + T++ G ++ WG+
Sbjct: 240 LMHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFWGK 296
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN + + +++ + + G+ + D ++ IFVG
Sbjct: 58 ASTALTAMNKRVFLDKEIKVN-----------------WATSPGNTPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 142/297 (47%), Gaps = 31/297 (10%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTN-WSTRKLPPPR 179
Query: 254 QYQKA------------------TYQNTQGSQGE-----NDPNNTTIFVGGLDPSV-TDD 289
+ K+ +N Q E + P NTT++ GG P+V +D+
Sbjct: 180 ESSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDE 239
Query: 290 ILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
++ F Q+G + V++ K F++F + A +A+ + +++ G ++ WG+
Sbjct: 240 LMHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGK 296
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q+ NG + S +N R NW+T
Sbjct: 144 VKKAEAENAIQSMNGQWIGS--RNIRTNWST 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 34/193 (17%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L + V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIG----PAATKKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
++T MN + + +++ P T K + I
Sbjct: 58 ASTALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHH--------------------I 97
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLN 331
FVG L P + + L+ F +GE+ + +I K FV F + AE A+ +N
Sbjct: 98 FVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMN 157
Query: 332 GTQLGGQSIRLSW 344
G +G ++IR +W
Sbjct: 158 GQWIGSRNIRTNW 170
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 24/257 (9%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ AAER +QT NG ++ +E R+NWA ++D F IFVGDL+
Sbjct: 71 YGFVEYDDPGAAERAMQTLNGRRVHQSE--IRVNWAYQSNSTNKEDTSNHFHIFVGDLSN 128
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + SV A+V+ D TGRS+GYGFV F + + ++++ M+G +
Sbjct: 129 EVNDEVLLQAFSA-FGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGS 187
Query: 237 RPMRIGPAATKKAATGQQYQKATYQN-------------TQGSQGENDPNN------TTI 277
R +R A K + Q Q T G + N TT
Sbjct: 188 RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTC 247
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
+VG L P T + +F +G +V + A + FV+ A A+ LNG + G
Sbjct: 248 YVGNLTPYTTQQDIVPLFQNFGFVVESRFQADRGFSFVKMDTHENAAMAICQLNGYNVNG 307
Query: 338 QSIRLSWG--RSPSNKQ 352
+ ++ SWG ++PS+ Q
Sbjct: 308 RPLKCSWGKDKTPSHPQ 324
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 36/211 (17%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + + F G +V+ + +T S GYGF+ F AE+ L +
Sbjct: 121 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 180
Query: 136 NGTQMPSTEQNFRLNWAT-----------------------YGAGERRQDDGPDFTIFVG 172
+G + S + R NWA YG + + V
Sbjct: 181 DGEWLGS--RAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVN 238
Query: 173 DLAA--------DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
A ++T Y Q+ ++ + VV R +G+ FV+
Sbjct: 239 QTPAWQTTCYVGNLTPYTTQQDIVPLFQNF--GFVVESRFQA-DRGFSFVKMDTHENAAM 295
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
++ ++NG + RP++ K + QQ+
Sbjct: 296 AICQLNGYNVNGRPLKCSWGKDKTPSHPQQF 326
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 46/338 (13%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR-SLWIGDLQPWMEESYI 90
Q Q QHQTP P VP PS GV P+ ++ + SL++GDL+ + +S +
Sbjct: 3 QIQVQHQTPAP---------VPAPSN-----GVVPNVANQFVTTSLYVGDLEVNVNDSQL 48
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
+F G+ VS +V R+ T S GYG++ F + A R L N T P ++ R+
Sbjct: 49 YDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDVLNFT--PMNNKSIRVM 106
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
++ R+ IF+ +L + L +TF + + + K+ TD +G+SKG
Sbjct: 107 YSHRDPSSRKSGTA---NIFIKNLDKTIDHKALHDTFSS-FGQIMSCKIATD-GSGQSKG 161
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
YGFV+F E ++ ++NG+L + + + +G +K K + N
Sbjct: 162 YGFVQFEAEDSAQNAIDKLNGMLINDKQVFVG-HFLRKQDRDNVLSKTKFNN-------- 212
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK-RC-GFVQFANRTCAEQ 325
++V L S T+D LK FG YG + V ++ G+ +C GFV F N A +
Sbjct: 213 ------VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAK 266
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
A+ LNG ++ + W + K+S++ Q G +
Sbjct: 267 AVEALNGKKVDDK----EWYVGKAQKKSEREQELKGRF 300
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 147/306 (48%), Gaps = 24/306 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G+ +S K+ + S+GYGF++F +
Sbjct: 112 PSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQ-SKGYGFVQFEAE 170
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT------IFVGDLAADVT 179
+A+ + NG + + +Q F G R+QD + ++V +L+ T
Sbjct: 171 DSAQNAIDKLNGM-LINDKQVF------VGHFLRKQDRDNVLSKTKFNNVYVKNLSESFT 223
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ L+ F A Y ++ A ++ D GRSK +GFV F + + +++ +NG +
Sbjct: 224 EDDLKNEFGA-YGTITSAVLMRD-ADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEW 281
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A +K + +Q K ++ T + +++ LD S+TD+ LK +F ++G
Sbjct: 282 YVGKA--QKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFG 339
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ KI P G + GFV F+ A +AL +NG + + + ++ + ++++
Sbjct: 340 TITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRKEDRRAR 399
Query: 355 -QAQWN 359
QAQ++
Sbjct: 400 LQAQFS 405
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 25/274 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L ETF +V+ ++
Sbjct: 96 LNYT--PIKGRLCRIMWSQRDPALRKKGSG---NIFIKNLHPDIDNKALFETF-SVFGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+K+ TD TG+SKG+GFV F ES ++ +NG+L + + + + P T+K Q
Sbjct: 150 LSSKIATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQ- 207
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----- 309
E + T ++V ++ TD+ +F +YG ++ +
Sbjct: 208 ------------LEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL 255
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
K GFV F A +A+ LNGT+ Q++ +S
Sbjct: 256 KGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVS 289
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 115 PALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIATD-ETGKSKGFGFVHFEHE 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
++A+ + NG + E + + ++ FT ++V ++ + TD
Sbjct: 174 SSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFN 233
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A Y +V + + G+ KG+GFV F + +++ E+NG + + + A
Sbjct: 234 ELF-AKYGNVLSSSL-EKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRA 291
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + + QG N +FV LD S+ D+ LK F YG +
Sbjct: 292 QKKYERMQELKKQYEASRLEKMAKYQGVN------LFVKNLDDSIDDEKLKEEFAPYGTI 345
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
V++ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 346 TSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 405
Query: 357 Q 357
Q
Sbjct: 406 Q 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + +F G +S + + + +G+GF++F H A + ++
Sbjct: 217 NVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL-KGFGFVDFEKHEDAAKAVEE 275
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGDLAADVTD 180
NGT+ +Q ++ A ER Q+ + +FV +L + D
Sbjct: 276 LNGTEF--KDQTLFVSRAQ-KKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDD 332
Query: 181 YVLQETFRAVYSSVKGAKVV-TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L+E F A Y ++ +V+ TD G+SKG+GFV F E +++TE N + + +P+
Sbjct: 333 EKLKEEF-APYGTITSVRVMRTD--NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 389
Query: 240 RIGPAATK---KAATGQQYQKAT 259
+ A K ++ QQ Q T
Sbjct: 390 YVAIAQRKDVRRSQLAQQIQART 412
>gi|194766221|ref|XP_001965223.1| GF24033 [Drosophila ananassae]
gi|190617833|gb|EDV33357.1| GF24033 [Drosophila ananassae]
Length = 339
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
++S+K AKV+ D + G SKGYGFVRFG E EQ +M +MNG + TRP++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKTAMYDMNGYIGLGTRPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 27/272 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G S +V R+ T S GY ++ F H A ++ ++
Sbjct: 48 SLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIEK 107
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ ++
Sbjct: 108 LNYT--PIKGKLCRIMWSQRDPSLRKKGHG---NIFIKNLNQDIDNKALFDTF-SVFGNI 161
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD TG+SKG+GFV F +ES ++ +NG+L + + + + P T+K Q
Sbjct: 162 LSSKIATDE-TGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQL 220
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA + T ++V +D TD+ K FG+ G + V + G
Sbjct: 221 EETKAHF--------------TNVYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGK 266
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
K GFV + + A +A+ LNG + Q +
Sbjct: 267 LKGFGFVNYEDHNDAVKAVEELNGAEFKDQEL 298
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 20/302 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + +T S+G+GF+ F
Sbjct: 127 PSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGNILSSKIATD-ETGKSKGFGFVHFEEE 185
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+AA + NG + E + + ++ FT ++V ++ + TD +
Sbjct: 186 SAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFK 245
Query: 185 ETFRAVYSSVKGAKVVTDR-TTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E F + + V +R G+ KG+GFV + D ++ ++++ E+NG + + +G
Sbjct: 246 EFFGKIGTVTS---VALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGR 302
Query: 244 AATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K + +QY+ + QG N +FV LD S+ D+ L+ F +G
Sbjct: 303 AQKKYERIQSLKKQYESTRLEKMAKYQGVN------LFVKNLDDSIDDEKLQEEFAPFGN 356
Query: 301 LVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
+ VK+ K GFV F++ A +A++ N + G+ + ++ + ++S
Sbjct: 357 ITSVKVMRTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQL 416
Query: 356 AQ 357
AQ
Sbjct: 417 AQ 418
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 80 DLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
DL+ EE FG G S + R +G+GF+ + H A + ++ NG +
Sbjct: 236 DLETTDEE--FKEFFGKIGTVTSVALERGPDGKL-KGFGFVNYEDHNDAVKAVEELNGAE 292
Query: 140 MPSTE-------------QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
E Q+ + + + + + G +FV +L + D LQE
Sbjct: 293 FKDQELFVGRAQKKYERIQSLKKQYESTRLEKMAKYQG--VNLFVKNLDDSIDDEKLQEE 350
Query: 187 FRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F A + ++ KV+ RT G+SKG+GFV F E +++TE N + + +P+ + A
Sbjct: 351 F-APFGNITSVKVM--RTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQ 407
Query: 246 TKKAATGQQYQKATYQN 262
K Q Q+ +N
Sbjct: 408 RKDVRRSQLAQQIQARN 424
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 248 KAATGQQYQKATYQNTQGSQ----GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
K + Q Q+AT +T S+ G+ND +T+++VG LDPSV++ +L +F G +
Sbjct: 16 KISEEQPQQEATPASTASSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVAS 75
Query: 304 VKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQ 352
+++ +V F++ +QA+ LN T + G+ R+ W R PS ++
Sbjct: 76 IRVCRDAITKTSLGYAYVNFSDHEAGKQAIEKLNYTPIKGKLCRIMWSQRDPSLRK 131
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 138/274 (50%), Gaps = 10/274 (3%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++F G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N E+ ++NWAT + + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ ++V D T +SKGY FV F ++E ++ MNG +R +R +T+K +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTN-WSTRKLPPPR 179
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFGQYGELVHVKIPAGKRC 312
+ K +Q + P NTT++ GG P+V +DD++ F Q+G + V++ K
Sbjct: 180 EPSKXXXXXEVYNQ--SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGF 237
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F++F + A A+ + +++ G ++ WG+
Sbjct: 238 SFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGK 271
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ T S+GY F+ F
Sbjct: 84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR-------------QDDGPDFTI 169
V A AE +Q NG + S ++ R NW+T R Q + T+
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSPTNTTV 201
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRF 216
+ G +V L + ++ +V D KG+ F++F
Sbjct: 202 YCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKF 242
>gi|289740797|gb|ADD19146.1| RNA-binding protein ELAV/HU [Glossina morsitans morsitans]
Length = 343
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I + F GE + +++RNK T GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFATDEQAMDAMHK 68
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 69 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK- 247
Y+S+K AKV+ D ++G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 124 KYTSIKTAKVILD-SSGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPKP 182
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPS 285
K G + G G + N +T V G D S
Sbjct: 183 KNELGVALGTTS---NYGYGGSANANTSTTTVSGTDYS 217
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 84
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 85 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 143
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 144 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 203
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 204 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 263
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 264 QQVDYSQW 271
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 137 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 194
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 195 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 240
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 187 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 246
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 247 QQVDYSQW 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 120 GGQWLGGRQ--IRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 223
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 28/295 (9%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++ +L P + + ++A++F G + K+I ++ Y F+EF H A LQ
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIF---EGLNDPYAFVEFSDHNQATLALQ 96
Query: 134 TFNGTQMPSTEQNFRLNWATY----GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
+ NG ++ E+ + WA G + + F +FVGDL +++ L+E F
Sbjct: 97 SHNGREL--LEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF-V 153
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-- 247
+ V AK++ D T + KGYGFV + + R++ EMNG R +R A K
Sbjct: 154 KFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Query: 248 ---------------KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
+Y + + + +NT+++VG + ++ +D ++
Sbjct: 214 EDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNI-ANLGEDEIR 272
Query: 293 TVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
F ++G + V+ + FV+F + A +A+ +N +GGQ +R SWG+S
Sbjct: 273 RAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKS 327
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 34/298 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E + ++FG G S K+IR ++ Y FIE+ ++ AA L
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPG---NDPYAFIEYSNYQAASTALT 63
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ ++NWAT + D IFVGDL+ ++ L+E F A +
Sbjct: 64 AMNKRVF--LDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAF-APFGE 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG--------PAA 245
+ ++V D T +SKGY FV F ++E ++ MNG +R +R P
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 246 TKKAATGQ----------------QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TD 288
+ K+ + Q+ T++ ++ P NTT++ GG P+V +D
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEV---YNQSSPTNTTVYCGGFPPNVISD 237
Query: 289 DILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+++ F Q+G + V++ K F++F ++ A +A+ + +++ G ++ WG+
Sbjct: 238 ELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWGK 295
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D+ T++VG+L V++ +L F + VK K++ R G Y F+ + +
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKM-GPVKSCKII--REPGNDP-YAFIEYSNYQA 57
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND-PNNTTIFVG 280
++T MN + + +++ + + G+ + D ++ IFVG
Sbjct: 58 ASTALTAMNKRVFLDKEIKV-----------------NWATSPGNTPKTDISSHHHIFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQ 334
L P + + L+ F +GE+ + +I K FV F + AE A+ +NG
Sbjct: 101 DLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQW 160
Query: 335 LGGQSIRLSW 344
+G +SIR +W
Sbjct: 161 IGSRSIRTNW 170
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P +++GDL P +E + F GE + +++R+ QT S+GY F+ F
Sbjct: 84 GNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSF 143
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWAT 153
V A AE +Q NG + S ++ R NW+T
Sbjct: 144 VKKAEAENAIQAMNGQWIGS--RSIRTNWST 172
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ + GK FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 187 SPFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 246
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 247 QQVDYSQW 254
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATYG-----------AGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 120 GGQWLGGRQ--IRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF S G + T G KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-----SPFGQILETRAFPG--KGYSFVRFSTHESAAHAIVSVNG 223
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 157/340 (46%), Gaps = 50/340 (14%)
Query: 36 QHQTPVPPPVG--WTPQPVPPPSQQT--QPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q+ P+P + + P+ P S Q P AP+ + R+L++G L P + E +
Sbjct: 44 QNNNPIPTAISSPMSGNPMSPTSGQPGYVPRRAAPEPNK---RALYVGGLDPRVTEDVLR 100
Query: 92 SIFGHTGEFVSGKVIRNKQTNF----SEG--YGFIEFVSHAAAERVLQTFNGTQMPSTEQ 145
IF TG S K+I +K + S+G YGF+E+ AAER + T NG ++ + E
Sbjct: 101 QIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNE- 159
Query: 146 NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT 205
D F IFVGDL+ +V D VL + F + + V A+V+ D T
Sbjct: 160 ----------------DTSNHFHIFVGDLSNEVNDEVLLQAF-STFGPVSEARVMWDMKT 202
Query: 206 GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATGQQYQKAT----- 259
GRS+GYGFV F D ++ R+++ M+G +R +R A K + + QQ A+
Sbjct: 203 GRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTP 262
Query: 260 -------YQNTQGSQ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+ T G Q + TT +VG L P + L +F +G + +
Sbjct: 263 TTPFGHHHFPTHGVQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRF 322
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+ + F++ A A+ LNG + G+ ++ SWG+
Sbjct: 323 QSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 362
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 26/322 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG---------------YG 118
R+L++G+L + E I +F G S K I + G Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANNDPYC 67
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+ ++
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEI 124
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
T ++ F A + + A+VV D T +SKGYGFV F ++ + ++ M G R
Sbjct: 125 TTEDIKSAF-APFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 239 MRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+R A K A + T Q ++ N T++ GG+ +T+ +++ FG
Sbjct: 184 IRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYCGGIGSGLTEQLMRQTFGV 243
Query: 298 YGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR-----SPSNKQ 352
+G+++ +++ K F++F+ A A+ +NGT + G ++ WG+ + + +Q
Sbjct: 244 FGQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWGKETPDMTKNFQQ 303
Query: 353 SDQAQWN-GGGYYGFAQGYEAY 373
D +QW G YG Q Y Y
Sbjct: 304 VDYSQWGQWGQMYGSPQQYGQY 325
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 40/217 (18%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG---------- 210
+DDG T++VG+L+ DVT+ ++ + F + K K +T++T GR G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQI-GPCKSCKSITEQTDGRRVGASVSFPVLPN 60
Query: 211 -----YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQG 265
Y FV F + + ++ MNG + G++ K + T
Sbjct: 61 ANNDPYCFVEFYEHRDAAAALAAMNG----------------RKILGKEV-KVNWATTPS 103
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFAN 319
SQ ++ N+ +FVG L P +T + +K+ F +G++ ++ K GFV F N
Sbjct: 104 SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYN 163
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
+ AE A+ + G LGG+ IR +W R P +S Q
Sbjct: 164 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 200
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 187 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 246
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 247 QQVDYSQW 254
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 120 GGQWLGGRQ--IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 223
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 29/289 (10%)
Query: 61 PYGVAPDASSDGIR----SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG 116
P A +A S + SL++G+L P + E+ + IF G S +V R+ T S G
Sbjct: 26 PATTAIEAESPNVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLG 85
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y ++ F H A + ++ N T + + R+ W+ R++ G IF+ +L
Sbjct: 86 YAYVNFNDHEAGKTAIEKLNYTAIKG--RPCRIMWSQRDPSMRKKGSG---NIFIKNLHP 140
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
D+ + L ETF +V+ ++ K+ D TG+SKG+GFV F +E ++ +NG+L +
Sbjct: 141 DIDNKTLYETF-SVFGNILSCKIANDE-TGKSKGFGFVHFENEEAAREAIDAINGMLLNG 198
Query: 237 RPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+ + + P +KK + Q E N T ++V LD T++ + +F
Sbjct: 199 QEVYVAPHVSKK-------------DRQSKLDEARANFTNVYVKNLDLEATEEDFENLFK 245
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
YG + V + + GFV F N A +A+ LN T+ GQ++
Sbjct: 246 PYGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTL 294
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG+L V++ +L + F + SV +V D T S GY +V F D ++
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPI-GSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIE 102
Query: 228 EMNGVLCSTRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++N RP RI P+ KK + IF+ L
Sbjct: 103 KLNYTAIKGRPCRIMWSQRDPSMRKKGSG------------------------NIFIKNL 138
Query: 283 DPSVTDDILKTVFGQYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
P + + L F +G ++ KI K GFV F N A +A+ +NG L G
Sbjct: 139 HPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNG 198
Query: 338 QSIRLSWGRSPSNKQS--DQAQWNGGGYY 364
Q + ++ S ++QS D+A+ N Y
Sbjct: 199 QEVYVAPHVSKKDRQSKLDEARANFTNVY 227
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
D + ++++ +L E ++F G S + ++ + S G+GF++F +H
Sbjct: 217 DEARANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGK-SRGFGFVDFENHE 275
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVG 172
A + ++ N T+ Y ER Q+ + +F+
Sbjct: 276 DAVKAVEALNDTEYKGQTLYVGRAQKKY---ERLQELKKQYQASKLEKLAKYQGINLFIK 332
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNG 231
+L + D L+E F A + ++ A+V+ RT G+SKG+GFV F E R++TE N
Sbjct: 333 NLDDSIDDEKLKEEF-APFGTITSARVM--RTENGKSKGFGFVCFSTPEEATRAITEKNQ 389
Query: 232 VLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+ + +P+ + A K Q Q+ +N
Sbjct: 390 QIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 420
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 84
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 85 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 143
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 144 RQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 203
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN----- 350
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+ +
Sbjct: 204 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNF 263
Query: 351 KQSDQAQW 358
+Q D +QW
Sbjct: 264 QQVDYSQW 271
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 137 GGQWLGGRQ--IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 194
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 195 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 240
>gi|189239005|ref|XP_974444.2| PREDICTED: similar to tRNA selenocysteine associated protein
(secp43) [Tribolium castaneum]
Length = 299
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I S F GE ++ KV+RNK T + GY F+ F + A +
Sbjct: 14 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 73
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ G D +F+++VGDL+ DV DY L F + Y+
Sbjct: 74 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLD--REFSVWVGDLSPDVDDYNLYRVFSSKYN 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++K AKV+ D ++G SKGYGFVRFG E E S+T MNG + T+ ++I A K
Sbjct: 131 TIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAVPK 185
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
S+W+GDL P +++ + +F + + + FS+GYGF+ F S L T
Sbjct: 106 SVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTT 165
Query: 135 FNG 137
NG
Sbjct: 166 MNG 168
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F ++G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + A +A+ LN ++L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+PSV++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPS 119
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F ++G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + A +A+ LN ++L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+PSV++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPS 119
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F ++G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + A +A+ LN ++L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+PSV++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPS 119
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F ++G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + A +A+ LN ++L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+PSV++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPS 119
>gi|256082950|ref|XP_002577714.1| tRNA selenocysteine associated protein (secp43) [Schistosoma
mansoni]
gi|360043607|emb|CCD81153.1| putative trna selenocysteine associated protein (secp43)
[Schistosoma mansoni]
Length = 348
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++W+GDL+P+M+E +I F +GE VS KVIRNK T + GYGFIEF + +A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 133 QTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN A+YG ++ ++FVG+L DV D L F+ Y
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYGKDSTSSNEC---SLFVGELTEDVDDLALFNAFKK-Y 121
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
+ + AKVV T G+S+GYGFVRF ES+ +++ EM N +P+R+ A K+
Sbjct: 122 PTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSLAIPKR 177
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI++GDL + + ++ F ++ KV+ ++ TG++ GYGF+ F + + +M
Sbjct: 7 TIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAML 66
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN--DPNNTTIFVGGLDPS 285
++NG L P R ++ S G++ N ++FVG L
Sbjct: 67 KLNGKLIPGAPTR------------------RFKLNHASYGKDSTSSNECSLFVGELTED 108
Query: 286 VTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVL-NGTQLGGQSI 340
V D L F +Y K+ + GFV+F + ++AL + N LG + I
Sbjct: 109 VDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPI 168
Query: 341 RLSWG 345
R+S
Sbjct: 169 RVSLA 173
>gi|56755515|gb|AAW25936.1| SJCHGC05387 protein [Schistosoma japonicum]
Length = 348
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
++W+GDL+P+M+E +I F +GE VS KVIRNK T + GYGFIEF + +A +
Sbjct: 6 HTIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAM 65
Query: 133 QTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P + F+LN A+YG ++ ++FVG+L DV D L F+ Y
Sbjct: 66 LKLNGKLIPGAPTRRFKLNHASYGKDSTSSNEC---SLFVGELTEDVDDLALFNAFKK-Y 121
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKK 248
+ + AKVV T G+S+GYGFVRF ES+ +++ EM N +P+R+ A K+
Sbjct: 122 PTCRSAKVVM--TNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKPIRVSLAIPKR 177
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI++GDL + + ++ F ++ KV+ ++ TG++ GYGF+ F + + +M
Sbjct: 7 TIWMGDLEPYMDEMFIKRAFETSGENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAML 66
Query: 228 EMNGVL---CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++NG L TR ++ A+ K +T N ++FVG L
Sbjct: 67 KLNGKLIPGAPTRRFKLNHASYGKDSTSS-------------------NECSLFVGELTE 107
Query: 285 SVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVL-NGTQLGGQS 339
V D L F +Y K+ + GFV+F + ++AL + N LG +
Sbjct: 108 DVDDLALFNAFKKYPTCRSAKVVMTNGKSRGYGFVRFLTESDMDKALIEMQNYCGLGYKP 167
Query: 340 IRLSWG 345
IR+S
Sbjct: 168 IRVSLA 173
>gi|270010282|gb|EFA06730.1| hypothetical protein TcasGA2_TC009661 [Tribolium castaneum]
Length = 294
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M E++I S F GE ++ KV+RNK T + GY F+ F + A +
Sbjct: 9 LWMGSLEPYMTETFIISAFRKMGENPLNVKVMRNKFTGEAAGYCFVHFANDEEAIDAMHK 68
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ G D +F+++VGDL+ DV DY L F + Y+
Sbjct: 69 LNGKPIPGTTPVVRFRLNNAS-NTGRTLLD--REFSVWVGDLSPDVDDYNLYRVFSSKYN 125
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++K AKV+ D ++G SKGYGFVRFG E E S+T MNG + T+ ++I A K
Sbjct: 126 TIKTAKVILD-SSGFSKGYGFVRFGSEDEMRDSLTTMNGYIGLGTKALKICNAVPK 180
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
S+W+GDL P +++ + +F + + + FS+GYGF+ F S L T
Sbjct: 101 SVWVGDLSPDVDDYNLYRVFSSKYNTIKTAKVILDSSGFSKGYGFVRFGSEDEMRDSLTT 160
Query: 135 FNG 137
NG
Sbjct: 161 MNG 163
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 41/220 (18%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGYGF 119
ASS +LW G+L+PWM+E Y + G + +S KV + +Q N + GY F
Sbjct: 177 ASSASRTTLWWGELEPWMDEEYAKQVCGLMNWDPLSIKVPHPAPDPVTGQQAN-NPGYCF 235
Query: 120 IEFVSHAAAERVLQTFNGTQ------MPSTEQNFRLNWATY-----------GAGERRQD 162
+ F + A VL N T MP++ + F LNWA+ G ++Q
Sbjct: 236 LTFSTQGQASSVLNQINTTNSGTPITMPNSTKPFLLNWASSTPIPPSLSPPGGVSAQQQQ 295
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGR 207
+++IFVGDLA + ++ L FR + S K AK++ D TG
Sbjct: 296 YPKEYSIFVGDLAPEASNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGV 355
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 356 SRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 395
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 246 TKKAATGQQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
T+++ QQ +A N G GE DP NTT+FVGGL P ++++ L+T F +GE+
Sbjct: 532 TEESWKHQQQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGEI 591
Query: 302 VHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+VK+P GK CGFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 592 HYVKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 637
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 42/329 (12%)
Query: 43 PPVGWTPQPVP-------PPSQQTQPYGVAPDASSDGIR-----SLWIGDLQPWMEESYI 90
P V PQPVP PP P G A A + G SL++G+L P + ES +
Sbjct: 4 PVVENVPQPVPEQVAAAAPP-----PLGYAASAPTHGANTATSASLYVGELDPTVTESML 58
Query: 91 ASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLN 150
IF G S +V R+ T S GY ++ +++ A ER L+ N + + + + R+
Sbjct: 59 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSSIKN--RPCRIM 116
Query: 151 WATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKG 210
W+ R+ G IF+ +L + + L +TF A + +V KV TD G SKG
Sbjct: 117 WSQRDPALRKTGQG---NIFIKNLDEQIDNKALHDTF-AAFGNVLSCKVATDE-HGNSKG 171
Query: 211 YGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN 270
YGFV + ++ +NG+L + + + +GP ++K Q E
Sbjct: 172 YGFVHYETAEAAENAIKSVNGMLLNDKKVYVGPHISRK-------------ERQSKIDEM 218
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGKRC--GFVQFANRTCAEQ 325
+ T ++V +DP VTD+ + +F QYG++ + + G+ GFV F A++
Sbjct: 219 RAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGRNLGFGFVNFETHEEAQK 278
Query: 326 ALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
A+ L+ + G+ + ++ + + ++++
Sbjct: 279 AVDALHESDFHGRKLYVARAQKKAEREAE 307
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ P + + ++F G+ S + R+ Q + G+GF+ F +H A++ +
Sbjct: 224 NLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGR-NLGFGFVNFETHEEAQKAVDA 282
Query: 135 -----FNGTQM------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
F+G ++ E+ L A + R + +++ +L DV D L
Sbjct: 283 LHESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGVNLYIKNLEDDVDDEKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ +V+ D G+SKG+GFV + E +++ EMN + ++P+ +
Sbjct: 343 RAEFEP-FGTITSCRVMRDER-GKSKGFGFVCYSAPDEATKAVAEMNNKMIGSKPLYVSL 400
Query: 244 AATKK 248
A K+
Sbjct: 401 AQRKE 405
>gi|195388164|ref|XP_002052753.1| GJ17734 [Drosophila virilis]
gi|194149210|gb|EDW64908.1| GJ17734 [Drosophila virilis]
Length = 345
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYSLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
Y+S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KYTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYVGLGTKPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 28/311 (9%)
Query: 49 PQPVPPPSQQTQPY---GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKV 105
P P + Q +P + P S RS+++G++ + ++ + +F G K+
Sbjct: 39 PHPGLLAAPQMEPIVSGNLPPGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKL 98
Query: 106 IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGP 165
IR ++++F GFI++ A + + NG P Q ++NWA +R+D
Sbjct: 99 IRKEKSSF----GFIDYYDRRYAALAILSLNGR--PLYGQPIKVNWAY--TSTQREDTSG 150
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F IFVGDL +VTD L F YS+ A+V+ D+ TGRS+G+GFV F ++ + +
Sbjct: 151 HFNIFVGDLCPEVTDATLFAFFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 209
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQYQ----KATYQNTQGSQGENDPNN------- 274
+ ++NG R +R ATK A G++ Q K N G+ +PN
Sbjct: 210 INDLNGKWLGNRQIRCN-WATKGANAGEEKQIVDSKVDLTNGTSESGKENPNEDGPESNP 268
Query: 275 --TTIFVGGLDPSVTDDILKTVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
TT++VG L T++ + F G + V++ K GFV+++ A QA+ +
Sbjct: 269 QFTTVYVGNLPHEATNNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQMA 328
Query: 331 NGTQLGGQSIR 341
NG +GG+ I+
Sbjct: 329 NGQLIGGRQIK 339
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG+++ VTD VLQE F+++ V+G K++ + +GF+ + D ++
Sbjct: 68 SVYVGNISLQVTDTVLQEVFQSI-GPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 122
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG RP+ P A T +Q E+ + IFVG L P VT
Sbjct: 123 SLNG-----RPLYGQPIKVNWAYTS-------------TQREDTSGHFNIFVGDLCPEVT 164
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 165 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 224
Query: 342 LSWGRSPSNKQSDQ 355
+W +N ++
Sbjct: 225 CNWATKGANAGEEK 238
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VTD +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 68 SVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 127
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
L GQ I+++W + + ++ +N
Sbjct: 128 PLYGQPIKVNWAYTSTQREDTSGHFN 153
>gi|112983244|ref|NP_001037608.1| tRNA selenocysteine 1-associated protein 1 [Bombyx mori]
gi|102269199|gb|ABF55965.2| CG15440-like protein [Bombyx mori]
Length = 214
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A +
Sbjct: 12 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 71
Query: 135 FNGTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN A+ Q + +F+++VGDL+ DV DY L F + Y+
Sbjct: 72 LNGKPIPGTFPVVRFRLNTASRETRANMQHER-EFSVWVGDLSPDVDDYSLYRVFASKYT 130
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D +G +KGYGFVRFG+E EQ ++ MNG T+P++I A K
Sbjct: 131 SIKTAKVILD-NSGYTKGYGFVRFGNEDEQRNALYAMNGYCGLGTKPLKICTAVPK 185
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L ++T+ + F + KV+ ++ TG GY FV F + E + +M +
Sbjct: 12 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 71
Query: 229 MNGVLCSTRPMR-IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+ P + T + +A Q+ + +++VG L P V
Sbjct: 72 LNG-----KPIPGTFPVVRFRLNTASRETRANMQHER---------EFSVWVGDLSPDVD 117
Query: 288 DDILKTVFG-QYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNG-TQLGGQSI 340
D L VF +Y + K+ K GFV+F N AL +NG LG + +
Sbjct: 118 DYSLYRVFASKYTSIKTAKVILDNSGYTKGYGFVRFGNEDEQRNALYAMNGYCGLGTKPL 177
Query: 341 RLS 343
++
Sbjct: 178 KIC 180
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 147 FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+ NWA + D F +FVGDLA ++ + L+ F A Y + AKV+ D T
Sbjct: 115 LKANWAMQNQMPKV-DTSKHFHVFVGDLATEIDNNALKAAF-AAYGEISEAKVIRDPQTM 172
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG-----PAATKKAATGQQYQKATYQ 261
+SKGYGFV F + +++ MNG L R +R PA+ ++A T +Q +
Sbjct: 173 KSKGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKEQTFDEVFN 232
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
T+ +NT+++VG + S T++ L+ F G + V+I + FV++A +
Sbjct: 233 ATRA-------DNTSVYVGNVHSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKE 285
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGRSPSNK--QSDQAQWNGGGYYG 365
A +A+ +NG ++ GQ+I+ SWGR+P++ ++QA NG G
Sbjct: 286 AATRAIMQMNGKEINGQNIKCSWGRTPNDNCLMTNQAALNGLSLVG 331
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 23/170 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + + + F GE KVIR+ QT S+GYGF+ F S +AE+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 136 NGTQMPSTEQNFRLNWATY--GAGERRQDDGPDF------------TIFVGDLAADVTDY 181
NG Q+ Q R NWA+ + E F +++VG++ + T+
Sbjct: 196 NG-QLIGRRQ-IRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGNVHSSTTEE 253
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
L+E F ++ GA +++ + +GY FVR+ + R++ +MNG
Sbjct: 254 DLREAFASI-----GA--ISEVRIFKQQGYAFVRYATKEAATRAIMQMNG 296
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ++ + +F G+ VS +V R+ + S GYG++ F + A R L
Sbjct: 32 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 91
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 92 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDRAIDHKALHDTF-STFGNI 145
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP +K
Sbjct: 146 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-FLRKQERESA 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
KA + N +FV L S TDD LK FG++G + V ++ GK
Sbjct: 204 ADKAKFNN--------------VFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKS 249
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
+C GFV F N A +A+ LNG + + + S ++++ Q
Sbjct: 250 KCFGFVNFENADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQ 297
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F +
Sbjct: 111 PSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQ-SKGYGFVQFDNE 169
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A++ ++ NG + + +Q + + E D +FV +L+ TD L+
Sbjct: 170 ESAQKAIEKLNGMLL-NDKQVYVGPFLRKQERESAADKAKFNNVFVKNLSESTTDDELKN 228
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF + ++ A V+ D G+SK +GFV F + + R++ +NG + +G A
Sbjct: 229 TF-GEFGTITSAVVMRD-GDGKSKCFGFVNFENADDAARAVEALNGKNFDDKEWYVGKAQ 286
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + Q+++++ + QG N ++V LD S+ D+ LK +F +G +
Sbjct: 287 KKSERENELKQRFEQSMKEAADKYQGAN------LYVKNLDDSIGDEKLKELFSPFGTIT 340
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F+ A +AL +NG + + + ++ + ++++ QA
Sbjct: 341 SCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQA 400
Query: 357 QWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYG 393
Q+ G PP+ P MY G PG G
Sbjct: 401 QFAQMRPVGM----------PPSVGPRVPMYPPGGPGIG 429
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 15/277 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L P + ES I +F G S K+I + + Y F+EF H+ A
Sbjct: 26 KTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAG--GDPYCFVEFYEHSHALAAHG 83
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
N ++ E R+NWAT + +R D IFVGDLA + T L+ F +
Sbjct: 84 AMNQRKILGKE--IRVNWATRPSNKR--DTSNHHHIFVGDLAPETTSDDLKTYFSRI-GI 138
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL---CSTRPMRIGPAATKKAA 250
V A+V+ D T +SKGYGFV F + + + + E ++ R +R AA K
Sbjct: 139 VSDARVMRDLQTNKSKGYGFVSFVNY-QDAQDIVEKKRIIPDALHGRQVRCNWAARKGGQ 197
Query: 251 TG-QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
TG + +QK + N +Q N N T+++GG +TD +++ F +G ++ +++
Sbjct: 198 TGGRTFQKLEFANVV-NQSSN--TNCTVYLGGCMSGLTDQLMRETFAGFGNILEIRVFPD 254
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
K F++F N T A QA++ +G+ L G +++ SWG+
Sbjct: 255 KGYSFIRFDNHTDAAQAITNKHGSTLEGYTVKCSWGK 291
>gi|195437766|ref|XP_002066811.1| GK24678 [Drosophila willistoni]
gi|194162896|gb|EDW77797.1| GK24678 [Drosophila willistoni]
Length = 357
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 13/182 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + TRP++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTRPIKICNAVPKP 181
Query: 249 AA 250
A
Sbjct: 182 KA 183
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF +V+ ++
Sbjct: 100 LNFT--PINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTF-SVFGNI 153
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV+F E +++++NG+L + + + +GP K+
Sbjct: 154 LSCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQ------ 206
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+N G +P ++V L S T+D LK +FG++G + V +
Sbjct: 207 ----ERENVSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKS 257
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GFV F N A +A+ LNG +
Sbjct: 258 RCFGFVNFENPDDAARAVEDLNGKKF 283
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 40/358 (11%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF++F
Sbjct: 119 PSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELE 177
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT-IFVGDLAADVTDYV 182
AA+ + NG + + ++ + + R++ P F ++V +L+ T+
Sbjct: 178 EAAQNAISKLNGMLL----NDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDN 233
Query: 183 LQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F +SV VV G+S+ +GFV F + + R++ ++NG +
Sbjct: 234 LKEIFGKFGPITSV----VVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWY 289
Query: 241 IGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKTVFGQYG 299
+ A KK+ + ++ +N + + +N T +++ LD S+ DD LK +F +G
Sbjct: 290 VC-RAQKKSEREMELKEKFEKNIKEAADKN--QGTNLYLKNLDDSIDDDEKLKEIFADFG 346
Query: 300 ELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ K GFV F + A +AL +NG +G + + ++ R +
Sbjct: 347 TITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRAR 406
Query: 354 DQAQWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYGTY----QQPGSYQQPQ 405
QAQ F+Q PP+ P MY G PG G Q P ++ PQ
Sbjct: 407 LQAQ--------FSQMRPM--VMPPSVAPRMPMYPPGVPGVGQQLFYGQPPPAFVNPQ 454
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL V D L + F V SV +V D T S GY +V F ++ R++
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQV-GSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N + +P+RI Y N S ++ N IF+ LD S+
Sbjct: 99 MLNFTPINGKPIRI-----------------MYSNRDPSSRKSGAAN--IFIKNLDKSID 139
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ L F +G ++ K+ K GFVQF A+ A+S LNG L + +
Sbjct: 140 NKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKV 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--PAGKRC----GFVQFANRTCAEQALS 328
T+++VG LD SV D L VF Q G +V V++ R +V F++ A +AL
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 329 VLNGTQLGGQSIRLSW-GRSPSNKQSDQA 356
+LN T + G+ IR+ + R PS+++S A
Sbjct: 99 MLNFTPINGKPIRIMYSNRDPSSRKSGAA 127
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 38/305 (12%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+++ IF G S +V R+ T S GY ++ F H A + ++
Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ +
Sbjct: 99 LNYT--PIKGRLCRIMWSQRDPSLRKKGSG---NIFIKNLHPDIDNKALYDTF-SVFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ- 253
+K+ TD G+SKG+GFV F +E ++ +NG+L + + + + P ++K Q
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG---- 309
+ KA Y T ++V ++ TD+ + +F ++G +V +
Sbjct: 212 EETKAHY--------------TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGK 257
Query: 310 -KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQ 368
K GFV + A +A+ LN ++L G+ +L GR AQ + +
Sbjct: 258 LKGFGFVNYEKHEDAVKAVEALNDSELNGE--KLYVGR---------AQKKNERMHVLKK 306
Query: 369 GYEAY 373
YEAY
Sbjct: 307 QYEAY 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G+ +S K+ ++ S+G+GF+ F
Sbjct: 118 PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEE 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA+ + NG + E + + + ++ +T ++V ++ ++ TD Q
Sbjct: 177 GAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQ 236
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F A + + A + D G+ KG+GFV + + ++++ +N + + +G A
Sbjct: 237 ELF-AKFGPIVSASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRA 294
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY+ + QG N +FV LD SV D+ L+ F YG +
Sbjct: 295 QKKNERMHVLKKQYEAYRLEKMAKYQGVN------LFVKNLDDSVDDEKLEEEFAPYGTI 348
Query: 302 VHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 349 TSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 408
Query: 357 Q 357
Q
Sbjct: 409 Q 409
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ ++ + +F G VS + ++ +G+GF+ + H A + ++
Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEA 278
Query: 135 FNGTQMP--------STEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
N +++ + ++N R++ R + + +FV +L V D L
Sbjct: 279 LNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKL 338
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
+E F A Y ++ AKV+ RT G+SKG+GFV F E +++TE N + + +P+ +
Sbjct: 339 EEEF-APYGTITSAKVM--RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 395
Query: 243 PAATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 396 IAQRKDVRRSQLAQQIQARN 415
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 251 TGQQYQKATYQNTQ-----GSQGENDPNNT-TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
T +Q + Q+ Q GS+ ++ N++ +++VG L+PSV++ L +F G + +
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 305 KIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPS 349
++ +V F + +A+ LN T + G+ R+ W R PS
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPS 119
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 144/284 (50%), Gaps = 29/284 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R ++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 103 LNFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALFDTFSA-FGTI 156
Query: 195 KGAKVVTDRTTGRSKGYGFVRFG-DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
KV T+ +G SKGYGFV++ DES Q ++ E+NG+L + + + +GP K+
Sbjct: 157 LSCKVATE-ISGESKGYGFVQYEQDESAQ-NAINELNGMLLNDKKVYVGPFVRKQ----- 209
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK 310
+N GS P ++V L S T+D LK +FG++G ++ V+ GK
Sbjct: 210 -----ERENVFGS-----PKFNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGK 259
Query: 311 -RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
RC GFV F N A +A+ LNG +L + + + + S ++
Sbjct: 260 SRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKSERE 303
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 143/309 (46%), Gaps = 30/309 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKVA-TEISGESKGYGFVQYEQD 180
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT-IFVGDLAADVTDYV 182
+A+ + NG + + ++ + + R++ P F ++V +L+ T+
Sbjct: 181 ESAQNAINELNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 236
Query: 183 LQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F +SV +V G+S+ +GFV F + + R++ ++NG + +
Sbjct: 237 LKEMFGKFGPITSV----IVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELY 292
Query: 241 IGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKTVFG 296
+G A K Q +++K+ + +QG T +++ LD SV DD LK +F
Sbjct: 293 VGRAQKKSEREMQLKEKFEKSNKETADKNQG------TNLYLKNLDGSVDDDEKLKELFA 346
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
++G + K+ K GFV F + A +AL +NG +G + + ++ R
Sbjct: 347 EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQRKEER 406
Query: 351 KQSDQAQWN 359
+ QAQ++
Sbjct: 407 RARLQAQFS 415
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALS 328
T+++VG LD SV D L VF Q G +V V++ +V F++ A +A+
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 329 VLNGTQLGGQSIRLSW-GRSPSNKQSDQA 356
+LN T + G+ IR+ + R PS+++S A
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAA 130
>gi|449662778|ref|XP_004205609.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Hydra
magnipapillata]
Length = 336
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 76 LWIGDLQPWMEESYIASIFGHTG-EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G + M+E +I F + G + ++ K I NK T+ Y F++F A VL
Sbjct: 8 LWMGSISADMDEKFIKEAFANMGFKVLAVKEIFNKTTSERATYCFVDFGDIKTAREVLIK 67
Query: 135 FNGTQMPSTE-QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG +P E + F+LN + YG G DG ++++FVGD+ +DV D L + FR Y S
Sbjct: 68 LNGESIPGIEGKKFKLNRSEYGRGSS-HSDGIEYSLFVGDITSDVNDNHLLDFFRIKYPS 126
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKK 248
V+ AKVV D G KGYGFVRF +E E R++TEM GV RP+R+ A K
Sbjct: 127 VRAAKVVIDE-KGSHKGYGFVRFFNEEEINRALTEMQGVKGLGQRPIRVNKAVKSK 181
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 118/242 (48%), Gaps = 48/242 (19%)
Query: 54 PPSQ--QTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV---- 105
PPS T P + P +SS+ RS LW GDL+ WM+E Y + G + V+ KV
Sbjct: 68 PPSSTTATNPAPLLPVSSSNTSRSTLWWGDLEVWMDEEYARQVCTLMGWDPVNIKVPHPA 127
Query: 106 ---IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNG----TQMPSTEQNFRLNWATY---- 154
+Q + GY F+ F SHA A VL N MP++ + F LNWA+
Sbjct: 128 PDPATGQQPANNPGYCFLTFPSHAHAAAVLAQINNAGKSVTMPNSSRPFVLNWASSVPAS 187
Query: 155 ----------GAGERRQDDGP----DFTIFVGDLAADVTDYVLQETFR------------ 188
GA P +++IFVGDLA + ++ L FR
Sbjct: 188 ATGASASFSGGAYPSSAPQQPQYQKEYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREP 247
Query: 189 ---AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
+ S K AK++ D TG S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA
Sbjct: 248 KYIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPAT 307
Query: 246 TK 247
K
Sbjct: 308 AK 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 253 QQYQKATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
Q +A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P
Sbjct: 470 QAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPV 529
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GK CGFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 530 GKHCGFVQFVRKADAERAIEKMQGFPIGGSKIRLSWGRS 568
>gi|170029244|ref|XP_001842503.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
gi|167881606|gb|EDS44989.1| RNA-binding post-transcriptional regulator csx1 [Culex
quinquefasciatus]
Length = 326
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE S K++RNK T GY F+ F + AA +
Sbjct: 8 LWMGSLESYMTEAFILAAFRKMGEDPSTVKLMRNKYTGDPAGYCFVSFKTDDAALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P T FRLN AT D +F+++VGDL++DV DY L F Y+
Sbjct: 68 LNGKPIPGTNPLVRFRLNSATNNQHRALLAD-REFSVWVGDLSSDVDDYSLYRVFSTKYT 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S+K AKV+ D ++G SKGYGFV+FG E EQ ++ +MNG + ++P++I A K
Sbjct: 127 SIKTAKVILD-SSGFSKGYGFVKFGLEDEQKNALYDMNGFIGLGSKPLKICNAVPK 181
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 119/240 (49%), Gaps = 48/240 (20%)
Query: 52 VPPPSQQTQPYGVAPDASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV---- 105
+PP Q+ P +P ++ R+ LW G+L+PWM+E Y + G + +S KV
Sbjct: 210 LPPAQPQSLP---SPSTATSSPRTTLWWGELEPWMDEEYAKQVCNLMGWDPISIKVPRPA 266
Query: 106 ---IRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ----MPSTEQNFRLNWATYGAGE 158
I +Q N + GY F+ F + A A VL N + MP++ + F LNWA+
Sbjct: 267 PDPITGQQAN-NPGYCFLTFSTQAQAASVLSQVNNSSSPMIMPNSSKPFSLNWASSIPSA 325
Query: 159 RRQDDGP----------------DFTIFVGDLAADVTDYVLQETFR-------------- 188
P +++IFVGDLA +V++ L FR
Sbjct: 326 PLSTSIPGQTISIPGVQNPQYPKEYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRF 385
Query: 189 -AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
+ S K AK++ D TG S+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 386 IRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRALIEMHGLYCLSRPMRISPATAK 445
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P +++D L+T F +GE+ +VK+P GK C
Sbjct: 606 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHC 665
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 666 GFVQFVRKPDAERAIEKMQGFPIGGSRIRLSWGRS 700
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
++G+L P + I SIF + V K+I + ++ Y F+EF +HA A+ F
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINS--VSYKGPYCFVEFETHADAQEA--KFR 56
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
Q ++ ++NWAT G +R D F IFVGDLA +V + +L++TF + +
Sbjct: 57 MDQRTVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEP-FGEISE 115
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+VV D +SKG+GFV F + +++ EM+ V + ++ AA K T +Y
Sbjct: 116 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYV 175
Query: 257 KATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQ 316
++ NTT++VG L P V D L+ +F QYG ++ K+ A K F++
Sbjct: 176 CVKNLLWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFIK 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL ++ + + F GE +V+++ N S+G+GF+ FV A + +
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEM 148
Query: 136 NGTQMPSTEQNFRLNWAT---------YGAGER-------RQDDGPDFTIFVGDLAADVT 179
+ + + + NWA Y + Q + T++VG+L DV
Sbjct: 149 DSVTIGGKQ--VKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTTVYVGNLPPDVK 206
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
DY LQ+ F + Y S+ KV D KGY F++
Sbjct: 207 DYELQQMF-SQYGSILETKVFAD------KGYAFIK 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS--KG-YGFVRFGDESEQLRSM 226
+VG+L T QE ++++ + AKVV + KG Y FV F ++ +
Sbjct: 1 YVGNLDPKCT----QELICSIFNKI--AKVVRCKMINSVSYKGPYCFVEFETHADAQEAK 54
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
M+ + +++ A N G + + N+ IFVG L +V
Sbjct: 55 FRMDQRTVMDKKLKVNWAT----------------NHPGMKRGDTNNHFHIFVGDLAENV 98
Query: 287 TDDILKTVFGQYGELVHVKI---PAGKRC---GFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ +L+ F +GE+ V++ PA + GFV F R A +A++ ++ +GG+ +
Sbjct: 99 DNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 158
Query: 341 RLSWGRSPSN 350
+ +W +N
Sbjct: 159 KTNWAARKNN 168
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 145/285 (50%), Gaps = 25/285 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+++ IF G S +V R+ T S GY ++ F H AA+ ++
Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEK 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ R++ G IF+ +L D+ + L +TF +V+ ++
Sbjct: 96 LNFT--PIKGKLCRIMWSQRDPSLRKKGAG---NIFIKNLHPDIDNKALYDTF-SVFGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+KV TD TG+SKG+G+V F ++ ++ +NG+L + + + +GP +KK
Sbjct: 150 LSSKVATDE-TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKE----- 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE---LVHVKIPAG-- 309
+++ ++ E N T +++ ++ TD + + ++G+ +V + P G
Sbjct: 204 -RESKFE-------EMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGEN 255
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F N A + + LN T+ GQ + ++ + +Q +
Sbjct: 256 KGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQE 300
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 20/302 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F G +S KV + +T S+G+G++ F
Sbjct: 115 PSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEED 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+A + NG + E + + + ++ +FT +++ ++ + TD +
Sbjct: 174 ESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFE 233
Query: 185 ETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
E V K VV +RT G +KG+GFV F + + ++ + E+N +P+ +
Sbjct: 234 EL---VAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNR 290
Query: 244 AATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGE 300
A K + +QY+ + QG N +F+ LD S+ D L+ F YG
Sbjct: 291 AQKKYERQQELKKQYEATRMEKMAKYQGIN------LFIKNLDDSIDDKKLEEEFAPYGT 344
Query: 301 LVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
+ K+ K GFV F+ A +A++ N + G+ + ++ + ++S
Sbjct: 345 ITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQL 404
Query: 356 AQ 357
AQ
Sbjct: 405 AQ 406
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------ 167
++G+GF+ FV+H A + ++ N T+ Q +N A ER+Q+ +
Sbjct: 255 NKGFGFVNFVNHEDAVKCVEELNNTEFKG--QPLYVNRAQ-KKYERQQELKKQYEATRME 311
Query: 168 --------TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDE 219
+F+ +L + D L+E F A Y ++ AKV+T G+SKG+GFV F
Sbjct: 312 KMAKYQGINLFIKNLDDSIDDKKLEEEF-APYGTITSAKVMTTEN-GKSKGFGFVCFSTP 369
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
E +++TE N + + +P+ + A K Q Q+ +N
Sbjct: 370 EEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 412
>gi|413916539|gb|AFW56471.1| hypothetical protein ZEAMMB73_945385 [Zea mays]
Length = 381
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 137 GTQMPSTEQ----NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TQ P+ ++ +F+L+ AT D D +IF+G+LA DVT Y+L F+A Y
Sbjct: 260 ATQQPAPKKLPHPDFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYP 319
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
SVK AK++ D++TG SK YGFV+FGD EQ++++T+MNG CSTRPMRIGP KK+
Sbjct: 320 SVKSAKIIFDKSTGLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKS 376
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 27/283 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 103 LNFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSA-FGNI 156
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV++ + ++ E+NG+L + + + +GP K+
Sbjct: 157 LSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------ 209
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK- 310
+N GS P ++V L S T+D LK +FG +G ++ V+ GK
Sbjct: 210 ----ERENVFGS-----PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKS 260
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
RC GFV F N A A+ LNG + + + + + S ++
Sbjct: 261 RCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 303
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 158/361 (43%), Gaps = 47/361 (13%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQD 180
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT-IFVGDLAADVTDYV 182
+A+ + NG + + ++ + + R++ P F ++V +L+ T+
Sbjct: 181 ESAQNAINELNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 236
Query: 183 LQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F +SV +V G+S+ +GFV F + + + ++ ++NG + +
Sbjct: 237 LKELFGNFGPITSV----IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 292
Query: 241 IGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKTVFG 296
+G A K Q ++K+ + +QG T +++ LD SV DD LK +F
Sbjct: 293 VGRAQKKSEREMQLKESFEKSNKETADRNQG------TNLYLKNLDGSVDDDEKLKELFA 346
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
++G + K+ K GFV F + A +AL +NG +G + + ++ R
Sbjct: 347 EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 406
Query: 351 KQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYGTY----QQPGSYQQP 404
+ QAQ++ + PP P MY G PG G Q P ++ P
Sbjct: 407 RARLQAQFS-----------QMRPVMPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNP 455
Query: 405 Q 405
Q
Sbjct: 456 Q 456
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSV 329
+++VG LD SV D L VF Q G +V V++ +V F++ A +AL +
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 330 LNGTQLGGQSIRLSW-GRSPSNKQSDQA 356
LN T + G+ IR+ + R PS+++S A
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAA 130
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 33/291 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P E+ + S F G +S ++ R+ T S GYG++ F AER L+
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + R+ W+ R+ G IF+ +L + L +TF + +
Sbjct: 62 LNYESF--MGRPIRIMWSQRDPSLRKSGKG---NIFIKNLDKTIDQKQLYDTF-SFIGKI 115
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG---PAATKKAAT 251
K+ D G SKGYGFV F E R++ ++NG++ + R + +G P++ +K+A+
Sbjct: 116 LSCKIAMDE-HGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSAS 174
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV---KIPA 308
G K + N I+V P TD+ L+ +F ++GE+ K P
Sbjct: 175 G----KLRFNN--------------IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPE 216
Query: 309 GKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
GK GFV F + AEQA+ V++G ++ G+++ S + +Q + Q
Sbjct: 217 GKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEERQEELKQ 267
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 25/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L +++ + F G+ +S K+ ++ N S+GYGF+ F
Sbjct: 81 PSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGN-SKGYGFVHFEKE 139
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWAT--YGAGERRQDDGPDF--TIFVGDLAADVTDY 181
AER ++ NG + N R+ + + +R+ G I+V + D TD
Sbjct: 140 ECAERAIEKINGMMI-----NDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDE 194
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++ F + + +K V G+SKG+GFV F D +++ M+G + R +
Sbjct: 195 KLRDMF-SEFGEIKSC-CVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALY- 251
Query: 242 GPAATKKAATGQQYQKATYQNTQGSQGENDPN---NTTIFVGGLDPSVTDDILKTVFGQY 298
+A ++ Q+ Q + + E ++V LD ++ D+ LK F Y
Sbjct: 252 ----ASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHY 307
Query: 299 GELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
G + K+ K GFV F A +A++ +N T +G + + ++ + ++++
Sbjct: 308 GPITSAKVMTDANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALAQRKEDRRA 367
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 6/181 (3%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F +FVGDL+ DV++ +L+ TF+ + V AKV+ D T +SKGYGFV F ++ ++
Sbjct: 5 FHVFVGDLSKDVSNELLKSTFQK-FGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAI 63
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
+ MNG R +R AA K + + K T++ S +NT+++VG + P
Sbjct: 64 SGMNGKWIGKRAVRTNWAARKNSEENRD--KLTFEQVFNS---TKADNTSVYVGNISPQT 118
Query: 287 TDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
TD L+ F YG++ V++ +R FV++ + CA +A+ +NG +L G +R SWGR
Sbjct: 119 TDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRCSWGR 178
Query: 347 S 347
+
Sbjct: 179 T 179
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + S F GE KVIR+ QT S+GYGF+ F + AE +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD-----------DGPDFTIFVGDLAADVTDYVLQ 184
NG + ++ R NWA E +D + +++VG+++ TD L+
Sbjct: 67 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLR 124
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
++F + Y + +V +++ Y FVR+ + +++ EMNG
Sbjct: 125 DSF-STYGDIAEVRVF------KTQRYAFVRYEKKECATKAIMEMNG 164
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVL 330
+FVG L V++++LK+ F ++GE+ K+ K GFV F N+ AE A+S +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 331 NGTQLGGQSIRLSW-GRSPSNKQSDQAQWNGGGYYGFAQGYEAY--GYAPPTQDPNMYYG 387
NG +G +++R +W R S + D+ + A Y +P T D ++
Sbjct: 67 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDL-RD 125
Query: 388 GFPGYG 393
F YG
Sbjct: 126 SFSTYG 131
>gi|414875536|tpg|DAA52667.1| TPA: hypothetical protein ZEAMMB73_787505 [Zea mays]
Length = 448
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 137 GTQMPSTEQ----NFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
TQ P+ ++ +F+L+ AT D D +IF+G+LA DVT Y+L F+A Y
Sbjct: 327 ATQQPAPKKLPHPDFKLDLATQQERHAADDSSSDHSIFIGNLAYDVTGYMLHHLFKAHYP 386
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKA 249
SVK AK++ D++TG SK YGFV+FGD EQ++++T+MNG CSTRPMRIGP KK+
Sbjct: 387 SVKSAKIIFDKSTGLSKCYGFVQFGDVDEQIQALTKMNGAYCSTRPMRIGPVPKKKS 443
>gi|357626972|gb|EHJ76844.1| tRNA selenocysteine associated protein [Danaus plexippus]
Length = 282
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 6/174 (3%)
Query: 78 IGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+G L+P M ES+I + F G+ ++ KV+RNK T GY F+ F + A + N
Sbjct: 1 MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN 60
Query: 137 GTQMPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
G +P T FRLN A+ A Q + +F+++VGDL+ADV DY L F A YSS+
Sbjct: 61 GKPIPGTFPVVRFRLNTASREARANMQQER-EFSVWVGDLSADVDDYSLYRVFAAKYSSI 119
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
K AKV+ D ++G +KGYGFVRFG+E EQ ++ MNG ++P++I A K
Sbjct: 120 KTAKVILD-SSGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKPLKICTAVPK 172
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 28/183 (15%)
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+G L ++T+ + F + KV+ ++ TG GY FV F + E + +M ++N
Sbjct: 1 MGSLEPNMTESFILAAFHRMGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDTMHKLN 60
Query: 231 GV-LCSTRPM---RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
G + T P+ R+ A+ + A QQ ++ +++VG L V
Sbjct: 61 GKPIPGTFPVVRFRLNTASREARANMQQERE-----------------FSVWVGDLSADV 103
Query: 287 TDDILKTVFG-QYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNG-TQLGGQS 339
D L VF +Y + K+ K GFV+F N AL +NG T LG +
Sbjct: 104 DDYSLYRVFAAKYSSIKTAKVILDSSGYTKGYGFVRFGNEDEQRNALYAMNGYTGLGSKP 163
Query: 340 IRL 342
+++
Sbjct: 164 LKI 166
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Query: 158 ERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFG 217
E R D F +FVGDL+ DV++ +L+ TF + V AKV+ D T +SKGYGFV F
Sbjct: 216 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFTK-FGEVSEAKVIRDVQTQKSKGYGFVSFP 274
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTI 277
++ ++ MNG R +R AA K + + K T++ S +NT++
Sbjct: 275 NKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRD--KLTFEQVFNS---TKADNTSV 329
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGG 337
+VG + TD L+ +F YG++ V+I +R FV++ + CA +A+ +NG ++ G
Sbjct: 330 YVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAG 389
Query: 338 QSIRLSWGRS 347
+R SWGR+
Sbjct: 390 NQVRCSWGRT 399
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + S F GE KVIR+ QT S+GYGF+ F + AE +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD-----------DGPDFTIFVGDLAADVTDYVLQ 184
NG + ++ R NWA E +D + +++VG+++ TD L+
Sbjct: 287 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 344
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
+ F + Y + ++ +++ Y FVR+ + +++ EMNG
Sbjct: 345 DLF-STYGDIAEVRIF------KTQRYAFVRYEKKECATKAIMEMNG 384
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVL 330
+FVG L V++++LK+ F ++GE+ K+ K GFV F N+ AE A++ +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 331 NGTQLGGQSIRLSW-GRSPSNKQSDQAQW 358
NG +G +++R +W R S + D+ +
Sbjct: 287 NGKWIGKRAVRTNWAARKNSEENRDKLTF 315
>gi|194856103|ref|XP_001968677.1| GG24374 [Drosophila erecta]
gi|190660544|gb|EDV57736.1| GG24374 [Drosophila erecta]
Length = 336
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 50/248 (20%)
Query: 56 SQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF-- 113
SQ QP S + R+LW+GDL P +E+ I I+ G V K+IR K+
Sbjct: 4 SQIPQPPSTTIQTSDEPPRTLWMGDLDPSFDETTIQQIWMTLGHQVQVKLIRAKKNLLIP 63
Query: 114 ----------------------------------SEGYGFIEFVSHAAAERVLQTFNGTQ 139
GY F++F S A+ LQ N T
Sbjct: 64 CSTSSTLASSQHVEDERIQINGVSFIDPNTTQLHHAGYCFVQFPSLQEAQAGLQ-LNSTP 122
Query: 140 MP-------------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
+P + ++NFRLNWA+ + P+F++FVGDL+ T+ L
Sbjct: 123 LPNLISSTTHNPTNPTAKRNFRLNWASGATLQSDIPTTPEFSLFVGDLSPTATEAHLLSL 182
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAAT 246
F+ + SVK +V+TD TG S+ +GFVRF DE E+ R++ EMNG+ C R +R+ A
Sbjct: 183 FQTKFKSVKTVRVMTDPITGASRCFGFVRFADEQERRRALVEMNGIWCQGRQLRVAYATP 242
Query: 247 KKAATGQQ 254
+ QQ
Sbjct: 243 RNNILQQQ 250
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQAL 327
G DP+NTT+F+GGL+ +T+ L+++F +G ++ VK+P GK CGFV+F +R AE A+
Sbjct: 391 GYTDPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAI 450
Query: 328 SVLNGTQLGGQSIRLSWGRS 347
+ G +G +IRLSWGR+
Sbjct: 451 QGMQGFIVGNSAIRLSWGRT 470
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 33/237 (13%)
Query: 51 PVPPPSQQTQPYGVAPDASSDGI----RSLWIGDLQPWMEESYIASIFGHT-GEFVSGKV 105
P PP S Q VA D ++D R+LW+GDL PW++E I ++ + + V K+
Sbjct: 67 PNPPVSTQQSSAVVAADNNTDSDYERPRTLWMGDLDPWLDEQGITDLWWNILHKRVVVKI 126
Query: 106 IRNKQT------NF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST------------ 143
I+ K + N+ + GY F+EF + A++ L + NG +P
Sbjct: 127 IKPKSSISNLDPNYQGLTNSGYCFVEFETFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNP 185
Query: 144 ---EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKV 199
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +V
Sbjct: 186 DNQKKYFRLNWASGATLTAPIIQTPEYSLFVGDLSASTTEAHLLAFFQKSFPNSIKTVRV 245
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+TD +G+S+ +GFVRF DESE+ R++ EMNGV + RP+R+ AT + +Y+
Sbjct: 246 MTDPISGKSRCFGFVRFTDESERQRALVEMNGVWFAGRPLRVA-LATPRTNPRNKYE 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 264 QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCA 323
Q +Q DP NTT+FVGGL V++ L T+F +G + VKIP GK CGFV++ R A
Sbjct: 377 QLAQPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEA 436
Query: 324 EQALSVLNGTQLGGQSIRLSWGR-SPSNKQ 352
E+A++ + G +GG +RLSWGR SP+NK+
Sbjct: 437 EEAIAAMQGFIIGGNRVRLSWGRVSPTNKK 466
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 114/212 (53%), Gaps = 25/212 (11%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTN--------FSEGYGFIEFVS 124
R+LW+GDL PW++E+ IA ++ + V+ K+I+ K + GY F+EF S
Sbjct: 102 RTLWMGDLDPWLDENGIADLWWKILQKRVTVKIIKPKTSKPDITYQGLSHSGYCFVEFES 161
Query: 125 HAAAERVL----QTFNGTQMPST----------EQNFRLNWATYGAGERRQDDGPDFTIF 170
A+ L Q MPS ++ FRLNWA+ P++++F
Sbjct: 162 FEDAQLALGLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWASGATLSAPIIQSPEYSLF 221
Query: 171 VGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
VGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF DESE+ R++ EM
Sbjct: 222 VGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVSGKSRCFGFVRFTDESERQRALVEM 281
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQ 261
NGV RP+R+ AT + ++Q +Q
Sbjct: 282 NGVWFGGRPLRVA-LATPRNVNRNKFQNQNHQ 312
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL VT+ L T+F +G + VKIP GK CGF++++ R AE+A++ +
Sbjct: 398 DPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTREEAEEAIAAM 457
Query: 331 NGTQLGGQSIRLSWGRSPSNKQ 352
G +GG +RLSWGR N +
Sbjct: 458 QGFIIGGNRVRLSWGRVSMNNK 479
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQY--GELVHVKI----PAGK-RC-GFVQFANRTCAEQAL 327
++FVG L S T+ L F + + V++ +GK RC GFV+F + + ++AL
Sbjct: 219 SLFVGDLSASTTEAHLLAFFQKNFPASIKTVRVMTDPVSGKSRCFGFVRFTDESERQRAL 278
Query: 328 SVLNGTQLGGQSIRLSWGRSPS---------NKQSDQAQWNGGGYYGFAQGYEAYGYAPP 378
+NG GG+ +R++ + N Q + + GGG G +Q Y PP
Sbjct: 279 VEMNGVWFGGRPLRVALATPRNVNRNKFQNQNHQGNPVNFYGGG--GDSQQEMVYMQPPP 336
Query: 379 TQ----DPNMYYG 387
Q P YYG
Sbjct: 337 PQMRVESPYAYYG 349
>gi|195159506|ref|XP_002020619.1| GL15405 [Drosophila persimilis]
gi|198475233|ref|XP_001356977.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
gi|194117569|gb|EDW39612.1| GL15405 [Drosophila persimilis]
gi|198138730|gb|EAL34043.2| GA13731 [Drosophila pseudoobscura pseudoobscura]
Length = 339
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKIFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGFIGLGTKPIKICNAVPK 180
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 113/225 (50%), Gaps = 49/225 (21%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIR-------NKQTNFSEGYGFIEFVSHA 126
+LW G+L+PWM+E Y + G + V+ KV R +Q N + GY F+ F S A
Sbjct: 219 TLWWGELEPWMDEEYAKQVCNLMGWDPVNIKVPRPPPDTVTGQQAN-NPGYCFLTFPSQA 277
Query: 127 AAERVLQTFNGTQ------MPSTEQNFRLNW-----------------ATYGAGERRQDD 163
A VL N + MP++ + F LNW AT G+ Q
Sbjct: 278 HAASVLSQINSSSNSPAMIMPNSSKPFSLNWTSSIPSPPVASALPGQTATLQTGQNPQYP 337
Query: 164 GPDFTIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRS 208
+++IFVGDLA +V++ L FR + S K AK++ D TG S
Sbjct: 338 K-EYSIFVGDLAPEVSNSDLVAVFRNPVLGLRNDREPRFIRPFLSCKSAKIMLDPVTGVS 396
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK-KAATG 252
+GYGFVRF DE++Q R++ EM+G+ C +RPMRI PA K K A G
Sbjct: 397 RGYGFVRFTDETDQQRALIEMHGLYCLSRPMRISPATAKFKPAPG 441
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE +DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 592 RAILSNLIGPNGEQLTSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC 651
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 652 GFVQFVRKPDAERAIEKMQGFPIGGSRIRLSWGRS 686
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 17/224 (7%)
Query: 124 SHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
SH A VLQ ++ L+ A+ E R D F +FVGDL+ DV++ +L
Sbjct: 160 SHLANAIVLQ-----------ESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNDLL 208
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ TF+ Y V AKV+ D T +SKGYGFV F ++ ++ MNG R +R
Sbjct: 209 KSTFQK-YGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNW 267
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
AA K + + K T++ S +NT+++VG + TD L+ F YG++
Sbjct: 268 AARKNSEENRD--KLTFEQVFNS---TKADNTSVYVGNISQQTTDADLRDSFSTYGDIAE 322
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
V++ +R FV++ + CA +A+ +NG ++ G +R SWGR+
Sbjct: 323 VRVFKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVRCSWGRT 366
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + S F GE KVIR+ QT S+GYGF+ F + AE +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD-----------DGPDFTIFVGDLAADVTDYVLQ 184
NG + ++ R NWA E +D + +++VG+++ TD L+
Sbjct: 254 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 311
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
++F + Y + +V +++ Y FVR+ + +++ EMNG
Sbjct: 312 DSF-STYGDIAEVRVF------KTQRYAFVRYDKKECATKAIMEMNG 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVL 330
+FVG L V++D+LK+ F +YGE+ K+ K GFV F N+ AE A++ +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 331 NGTQLGGQSIRLSW-GRSPSNKQSDQAQW 358
NG +G +++R +W R S + D+ +
Sbjct: 254 NGKWIGKRAVRTNWAARKNSEENRDKLTF 282
>gi|28574707|ref|NP_608837.2| CG15440 [Drosophila melanogaster]
gi|19528537|gb|AAL90383.1| RE72132p [Drosophila melanogaster]
gi|28380262|gb|AAF51009.2| CG15440 [Drosophila melanogaster]
gi|220948848|gb|ACL86967.1| CG15440-PA [synthetic construct]
gi|220958268|gb|ACL91677.1| CG15440-PA [synthetic construct]
Length = 336
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|332808237|ref|XP_001141981.2| PREDICTED: tRNA selenocysteine 1-associated protein 1 [Pan
troglodytes]
Length = 255
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 36/177 (20%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T A+R
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLT--------------GPAKR--- 46
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S
Sbjct: 47 -------------FKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 90
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATKKA 249
+G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ A K +
Sbjct: 91 CRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 146
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 54 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 111
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 112 FTDELEQKRALTECQG 127
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 21/138 (15%)
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMR---IGPAATKKAATGQQYQKATYQNTQGSQGENDP 272
+ DE+ R+ M + S + +R GPA K ATY G Q +N P
Sbjct: 13 YMDENFISRAFATMGETVMSVKIIRNRLTGPAKRFKL------NYATY----GKQPDNSP 62
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQA 326
++FVG L P V D +L F + G++V + K GFV+F + ++A
Sbjct: 63 E-YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRA 121
Query: 327 LSVLNGTQ-LGGQSIRLS 343
L+ G LG + +RLS
Sbjct: 122 LTECQGAVGLGSKPVRLS 139
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L+IG L + E + IF TG S K+I +K + YGF+E+ AAER +
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSK-GLNYGFVEYDDPGAAERAMS 150
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
T NG ++ +E R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 151 TLNGRRVHQSE--IRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 207
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + + ++++ M+G +R +R A K +
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 254 QYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 268 QQQAMAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPL 327
Query: 295 FGQYGELVHVKIPAGKRCGFVQF 317
F +G +V + + FV+
Sbjct: 328 FQNFGYVVETRFQTDRGFRFVKM 350
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L A VT+ +L++ F V+ K++ D+ + + YGFV + D R+M+
Sbjct: 94 LYIGGLDARVTEDILRQIFETT-GHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMST 151
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
+NG +R+ A YQ+ ++ E+ N+ IFVG L V D
Sbjct: 152 LNGRRVHQSEIRVNWA---------------YQSNNNNK-EDTSNHFHIFVGDLSNEVND 195
Query: 289 DILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIRL 342
++L F +G + ++ + G FV F R AE+ALS ++G LG ++IR
Sbjct: 196 EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRC 255
Query: 343 SWG 345
+W
Sbjct: 256 NWA 258
>gi|195471272|ref|XP_002087929.1| GE14719 [Drosophila yakuba]
gi|194174030|gb|EDW87641.1| GE14719 [Drosophila yakuba]
Length = 338
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 24/284 (8%)
Query: 77 WIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFN 136
+IG+L E I +F G K+I N + YGF+E+ +A R L N
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGN--DPYGFVEYAEKNSAARALDAMN 65
Query: 137 GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKG 196
G S + ++NWAT + + D + IFVGDL+ D+ +L+ F + V
Sbjct: 66 GYSFGS--RAIKVNWATNSSMRK---DTNHYHIFVGDLSPDIDTTLLRSAFNQ-FGHVSD 119
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
A+VV D TG+ +GYGFV + + E +M MNG R +R A K AT +
Sbjct: 120 ARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNR-- 177
Query: 257 KATYQNTQGSQGEN----------DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
QN+ S ++ N T++VG L T++ L+ +F +G + +++
Sbjct: 178 ----QNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLSAGTTEETLRRIFIPFGPIADIRV 233
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
K F+++ + A A+ V++GT + G ++ SWG+ ++
Sbjct: 234 FPDKNYAFIRYMSHDHATNAIVVIHGTAVEGSQVKCSWGKEAND 277
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P ++ + + S F G +V+++ T GYGF+ + AE +Q+
Sbjct: 93 IFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSM 152
Query: 136 NGTQMPSTEQNFRLNWATY--GAGERRQDDGP------------------DFTIFVGDLA 175
NG + +N R NWAT GA RQ+ + T++VG+L+
Sbjct: 153 NGAWLGG--RNIRTNWATRKPGATTNRQNSDSSSTKSLNYDEIYLQTAVYNCTVYVGNLS 210
Query: 176 ADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
A T+ L+ F + + +V D K Y F+R+ ++ ++G
Sbjct: 211 AGTTEETLRRIF-IPFGPIADIRVFPD------KNYAFIRYMSHDHATNAIVVIHG 259
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 278 FVGGLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGT 333
++G LD T+ + +F ++G + K+ GFV++A + A +AL +NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 334 QLGGQSIRLSWGRSPSNKQ 352
G ++I+++W + S ++
Sbjct: 68 SFGSRAIKVNWATNSSMRK 86
>gi|195576533|ref|XP_002078130.1| GD22708 [Drosophila simulans]
gi|194190139|gb|EDX03715.1| GD22708 [Drosophila simulans]
Length = 336
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|195342467|ref|XP_002037822.1| GM18090 [Drosophila sechellia]
gi|194132672|gb|EDW54240.1| GM18090 [Drosophila sechellia]
Length = 336
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+ +M E++I + F GE + +++RNK T GY F+ F+S A +
Sbjct: 8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67
Query: 135 FNGTQMPSTE--QNFRLNWATYGA---GERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P T FRLN A+ G R+ F+++VGDL++DV DY L + F +
Sbjct: 68 LNGKPIPGTNPIVRFRLNSASNSYKLPGNERE-----FSVWVGDLSSDVDDYQLYKVFSS 122
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
++S+K AKV+ D + G SKGYGFVRFG E EQ ++ +MNG + T+P++I A K
Sbjct: 123 KFTSIKTAKVILD-SLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVPK 180
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 28/210 (13%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVSGKVIR--NKQTN------FSEGYGFIE 121
D R+LW+GDL PW++E+ I ++ + V+ K+I+ N +T+ + GY F+E
Sbjct: 106 DKPRTLWMGDLDPWLDENAIQDLWWSILQKKVTIKIIKPKNPKTDPTFHGLTNSGYCFVE 165
Query: 122 FVSHAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPD 166
F S A++ L + NG +P ++ FRLNWA+ P+
Sbjct: 166 FESFEDAQQAL-SLNGQLLPDIAMPSQQHFPNNPDNQKKYFRLNWASGATLSAPIVQTPE 224
Query: 167 FTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRS 225
F++FVGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF +ESE+ R+
Sbjct: 225 FSLFVGDLSASTTEAHLLAFFQKTFPNSIKTVRVMTDPISGKSRCFGFVRFTEESERQRA 284
Query: 226 MTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
+ EMNGV + RP+R+ A + TG++Y
Sbjct: 285 LVEMNGVWFAGRPLRVALATPR--ITGRRY 312
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL V + L T+F +G + VKIP GK CGFV+++ R AE+A++ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 331 NGTQLGGQSIRLSWGRSPSNKQ 352
G +GG +RLSWGR N +
Sbjct: 505 QGFIIGGNRVRLSWGRVSMNNK 526
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 45/281 (16%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
SD R+L++G+L + E +IA++F G KVI F E
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI------FDE-------------- 81
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
++NWA G + + D F +FVGDL+++V + L+E F+
Sbjct: 82 -----------------MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQ 124
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V AKV+ D T +SKGYGFV + E R++ +MNG R +R A K
Sbjct: 125 P-FGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 183
Query: 249 AATGQQYQKATYQNTQGSQGENDP--NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
G Q + + Y + N +NT+++VG + S+T+D ++ F +G + V+I
Sbjct: 184 ---GDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 239
Query: 307 PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+ FV+F N+ A +A+ +N +GGQ +R SWG++
Sbjct: 240 FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGKT 280
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 27/282 (9%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N T P + R+ ++ R+ IF+ +L + + L +TF A + ++
Sbjct: 104 NFT--PVNGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSA-FGNIL 157
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV T+ +G SKGYGFV++ + ++ E+NG+L + + + +GP K+
Sbjct: 158 SCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------- 209
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG---ELVHVKIPAGK-R 311
+N GS P ++V L S T+D LK +FG +G ++ V+ GK R
Sbjct: 210 ---ERENVFGS-----PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSR 261
Query: 312 C-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
C GFV F N A A+ LNG + + + + + S ++
Sbjct: 262 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 303
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 158/361 (43%), Gaps = 47/361 (13%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF+++
Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQD 180
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFT-IFVGDLAADVTDYV 182
+A+ + NG + + ++ + + R++ P F ++V +L+ T+
Sbjct: 181 ESAQNAINELNGMLL----NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 236
Query: 183 LQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F +SV +V G+S+ +GFV F + + + ++ ++NG + +
Sbjct: 237 LKELFGNFGPITSV----IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 292
Query: 241 IGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKTVFG 296
+G A K Q ++K+ + +QG T +++ LD SV DD LK +F
Sbjct: 293 VGRAQKKSEREMQLKESFEKSNKETADRNQG------TNLYLKNLDGSVDDDEKLKELFA 346
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
++G + K+ K GFV F + A +AL +NG +G + + ++ R
Sbjct: 347 EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 406
Query: 351 KQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYGTY----QQPGSYQQP 404
+ QAQ++ + PP P MY G PG G Q P ++ P
Sbjct: 407 RARLQAQFS-----------QMRPVMPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNP 455
Query: 405 Q 405
Q
Sbjct: 456 Q 456
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVL 330
++VG LD SV D L VF Q G +V V++ +V F++ A +AL +L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 331 NGTQLGGQSIRLSW-GRSPSNKQSDQA 356
N T + G+ IR+ + R PS+++S A
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRKSGAA 130
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ T S GY ++ F S A A R L+
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ IF+ +L + + L +TF +V+ ++
Sbjct: 100 LNFT--PINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTF-SVFGNI 153
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ +G SKGYGFV+F E +++++NG+L + + + +GP
Sbjct: 154 LSCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFV--------- 203
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+K +N G +P ++V L S T+D LK +FG++G + V +
Sbjct: 204 -RKQERENVSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKS 257
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GFV F N A +A+ LNG +
Sbjct: 258 RCFGFVNFENPDDAARAVEDLNGKKF 283
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 52/364 (14%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + + S+GYGF++F
Sbjct: 119 PSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELE 177
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD-----GPDFT-IFVGDLAADVT 179
AA+ + NG + + G R+Q+ P F ++V +L+ T
Sbjct: 178 EAAQNAISKLNGMLLNDKK-------VYVGPFVRKQERENVSGNPKFNNVYVKNLSESTT 230
Query: 180 DYVLQETFRAV--YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+ L+E F +SV VV G+S+ +GFV F + + R++ ++NG +
Sbjct: 231 EDNLKEIFGKFGPITSV----VVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDK 286
Query: 238 P---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD-ILKT 293
R + ++ ++++K + +QG T +++ LD S+ DD LK
Sbjct: 287 EWYVCRAQKKSEREMELKEKFEKNIKEAADKNQG------TNLYLKNLDDSIDDDEKLKE 340
Query: 294 VFGQYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RS 347
+F +G + K+ K GFV F + A +AL +NG +G + + ++ R
Sbjct: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
Query: 348 PSNKQSDQAQWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYGTY----QQPGSY 401
+ QAQ F+Q PP+ P MY G PG G Q P ++
Sbjct: 401 EERRARLQAQ--------FSQMRPM--VMPPSVAPRMPMYPPGVPGVGQQLFYGQPPPAF 450
Query: 402 QQPQ 405
PQ
Sbjct: 451 VNPQ 454
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL V D L + F V SV +V D T S GY +V F ++ R++
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQV-GSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N + +P+RI Y N S ++ N IF+ LD S+
Sbjct: 99 MLNFTPINGKPIRI-----------------MYSNRDPSSRKSGAAN--IFIKNLDKSID 139
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ L F +G ++ K+ K GFVQF A+ A+S LNG L + +
Sbjct: 140 NKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKV 197
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI--PAGKRC----GFVQFANRTCAEQALS 328
T+++VG LD SV D L VF Q G +V V++ R +V F++ A +AL
Sbjct: 39 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE 98
Query: 329 VLNGTQLGGQSIRLSW-GRSPSNKQSDQAQ 357
+LN T + G+ IR+ + R PS+++S A
Sbjct: 99 MLNFTPINGKPIRIMYSNRDPSSRKSGAAN 128
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSE-----GYGFIEFVSHAAAE 129
L++GDL P E+ I SI+ GE V K+I++ N S GY F+EF + AA
Sbjct: 58 LYMGDLNPDWTENDIKSIWSMLGEPNVQVKLIKSSNPNKSHAVNNSGYCFVEFPNQMAAS 117
Query: 130 RVLQTFNGTQMP-STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
L +G ++P + +LNWA++ G +FT+FVGDLA +VT+ L E F
Sbjct: 118 NALMK-SGLRVPMDSNYALKLNWASFATAP-----GSEFTLFVGDLAPNVTEAQLFELFI 171
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ YSS AK+V D+ TG SKGYGFV+F +E EQ R++ EM G + R +R+G + K
Sbjct: 172 SRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFLNGRAIRVGTTSKNK 231
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 57/77 (74%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+F+GGL +T+D L++ F +G++V+VKIP GK CGFVQ+ +R AE A+S +
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 331 NGTQLGGQSIRLSWGRS 347
G +G IRLSWGRS
Sbjct: 372 QGFPIGNSRIRLSWGRS 388
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 33/195 (16%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS-----KGYGFVRFGDESEQL 223
+++GDL D T+ ++ + + K++ +S GY FV F ++
Sbjct: 58 LYMGDLNPDWTENDIKSIWSMLGEPNVQVKLIKSSNPNKSHAVNNSGYCFVEFPNQ---- 113
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+ S M+ G + + A++ GS+ T+FVG L
Sbjct: 114 --------MAASNALMKSGLRVPMDSNYALKLNWASFATAPGSE-------FTLFVGDLA 158
Query: 284 PSVTDDILKTVF-GQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVLNGTQLG 336
P+VT+ L +F +Y ++ KI K GFV+F N ++AL + GT L
Sbjct: 159 PNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQRALVEMQGTFLN 218
Query: 337 GQSIRLSWGRSPSNK 351
G++IR+ G + NK
Sbjct: 219 GRAIRV--GTTSKNK 231
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 149 LNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRS 208
L+ A+ E R D F +FVGDL+ DV++ +L+ TF+ Y V AKV+ D T +S
Sbjct: 115 LHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFQK-YGEVSEAKVIRDAQTQKS 173
Query: 209 KGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG 268
KGYGFV F ++ ++ MNG R +R AA K + + K T++ S
Sbjct: 174 KGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSE--ENRDKLTFEQVFNS-- 229
Query: 269 ENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALS 328
+NT+++VG + T+ L+ F YG++ V++ +R FV++ + CA +A+
Sbjct: 230 -TKADNTSVYVGNISQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIM 288
Query: 329 VLNGTQLGGQSIRLSWGRS 347
+NG +L G +R SWGR+
Sbjct: 289 EMNGKELTGNQVRCSWGRT 307
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL + + S F GE KVIR+ QT S+GYGF+ F + AE +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQD-----------DGPDFTIFVGDLAADVTDYVLQ 184
NG + ++ R NWA E +D + +++VG+++ T+ L+
Sbjct: 195 NGKWI--GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTETDLR 252
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
E+F + Y + +V +++ Y FVR+ + +++ EMNG
Sbjct: 253 ESF-STYGDIAEVRVF------KTQRYAFVRYDKKECATKAIMEMNG 292
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 277 IFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFANRTCAEQALSVL 330
+FVG L V++++LK+ F +YGE+ K+ K GFV F N+ AE A++ +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 331 NGTQLGGQSIRLSW-GRSPSNKQSDQAQW 358
NG +G +++R +W R S + D+ +
Sbjct: 195 NGKWIGKRAVRTNWAARKNSEENRDKLTF 223
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 25/293 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + ++ + +F G K+IR ++++F GFI++
Sbjct: 111 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSF----GFIDYYDR 166
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A + + NG Q+ Q ++NWA R+D F IFVGDL +VTD L
Sbjct: 167 RYAALAILSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFA 222
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F YS+ A+V+ D+ TGRS+G+GFV F ++ + ++ ++NG R +R A
Sbjct: 223 FFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCN-WA 280
Query: 246 TKKAATGQQYQ----KATYQNTQGSQG---------ENDPNNTTIFVGGLDPSVTDDILK 292
TK A G++ Q K N G EN+P TT++VG L T + +
Sbjct: 281 TKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVH 340
Query: 293 TVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
F G + V++ K GFV+++ A A+ + NG +GG+ I+ S
Sbjct: 341 LFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD VLQE F+++ V+G K++ + +GF+ + D ++
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSI-GPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 174
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y ++T G + IFVG L P VT
Sbjct: 175 SLNGRQLYGQPIKVNWA----------YTSTPREDTSG--------HFNIFVGDLCPEVT 216
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 217 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 276
Query: 342 LSWGRSPSN 350
+W +N
Sbjct: 277 CNWATKGAN 285
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 185 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 244
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQ----------- 161
G+GF+ F + A+ + NG + + + R NWAT G AGE +Q
Sbjct: 245 RGFGFVSFRNQQDAQSAINDLNGKWLGNRQ--IRCNWATKGANAGEEKQILDTKVDLSNG 302
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
+DGP+ T++VG+L + T + F ++ GA + +
Sbjct: 303 SSESGKENPNEDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 357
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
R KG+GFVR+ E ++ NG L R ++
Sbjct: 358 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VTD +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 179
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
QL GQ I+++W + + ++ +N
Sbjct: 180 QLYGQPIKVNWAYTSTPREDTSGHFN 205
>gi|374671519|gb|AEZ56381.1| CBF-2 DNA-binding protein, partial [Dimocarpus longan]
Length = 84
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLA 175
GYGF+EF S AAAE+VLQ+++G+ MP+TEQ FRLNWAT+ AG+RR + G D +IFVGDLA
Sbjct: 1 GYGFVEFCSRAAAEKVLQSYSGSVMPNTEQPFRLNWATFSAGDRRTEAGSDLSIFVGDLA 60
Query: 176 ADVTDYVLQETFRAVYSSVKGAKV 199
DVTD +LQ TF + + SVKGAKV
Sbjct: 61 PDVTDGMLQATFSSKFPSVKGAKV 84
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 25/293 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P S RS+++G++ + ++ + +F G K+IR ++++F GFI++
Sbjct: 111 PGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSF----GFIDYYDR 166
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A + + NG Q+ Q ++NWA R+D F IFVGDL +VTD L
Sbjct: 167 RYAALAILSLNGRQLYG--QPIKVNWAY--TSTPREDTSGHFNIFVGDLCPEVTDATLFA 222
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F YS+ A+V+ D+ TGRS+G+GFV F ++ + ++ ++NG R +R A
Sbjct: 223 FFSG-YSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCN-WA 280
Query: 246 TKKAATGQQYQ----KATYQNTQGSQGENDPNN---------TTIFVGGLDPSVTDDILK 292
TK A G++ Q K N G+ +PN+ TT++VG L T + +
Sbjct: 281 TKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVH 340
Query: 293 TVFGQY--GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
F G + V++ K GFV+++ A A+ + NG +GG+ I+ S
Sbjct: 341 LFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 55 PSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFS 114
P + Y P + G ++++GDL P + ++ + + F +V+ +++T S
Sbjct: 185 PIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRS 244
Query: 115 EGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYG--AGERRQ----------- 161
G+GF+ F + A+ + NG + + + R NWAT G AGE +Q
Sbjct: 245 RGFGFVSFRNQQDAQSAINDLNGKWLGN--RQIRCNWATKGANAGEEKQILDTKVDLSNG 302
Query: 162 ----------DDGPD-----FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTG 206
DDGP+ T++VG+L + T + F ++ GA + +
Sbjct: 303 SSESGKENPNDDGPENNPQFTTVYVGNLPHEATMNDVHLFFHSL-----GAGSIEEVRVT 357
Query: 207 RSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
R KG+GFVR+ E ++ NG L R ++
Sbjct: 358 RDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIK 391
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG++ VTD VLQE F+++ V+G K++ + +GF+ + D ++
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSI-GPVEGCKLIRKEKSS----FGFIDYYDRRYAALAIL 174
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +P+++ A Y ++T G + IFVG L P VT
Sbjct: 175 SLNGRQLYGQPIKVNWA----------YTSTPREDTSG--------HFNIFVGDLCPEVT 216
Query: 288 DDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNGTQLGGQSIR 341
D L F Y ++ ++ G FV F N+ A+ A++ LNG LG + IR
Sbjct: 217 DATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 276
Query: 342 LSWGRSPSN 350
+W +N
Sbjct: 277 CNWATKGAN 285
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC--GFVQFANRTCAEQALSVLNGT 333
+++VG + VTD +L+ VF G + K+ ++ GF+ + +R A A+ LNG
Sbjct: 120 SVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILSLNGR 179
Query: 334 QLGGQSIRLSWGRSPSNKQSDQAQWN 359
QL GQ I+++W + + ++ +N
Sbjct: 180 QLYGQPIKVNWAYTSTPREDTSGHFN 205
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GINDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-EGGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|156542291|ref|XP_001604737.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Nasonia
vitripennis]
Length = 294
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES++ + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPST--EQNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + + FRLN A+ A ER +++I+VGDL+ DV DY L TF A
Sbjct: 70 LNGKIIPGSNPQVRFRLNHASTTGKPAAER------EYSIWVGDLSTDVDDYSLYRTFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG TR ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEDEQKDSLVTMNGYRGLGTRSLKICNAVPR 181
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFVMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG ++ + P R+ A+T K A ++Y +I+VG L
Sbjct: 70 LNGKIIPGSNPQVRFRLNHASTTGKPAAEREY--------------------SIWVGDLS 109
Query: 284 PSVTD-DILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D + +T +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 110 TDVDDYSLYRTFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKDSLVTMNGYRGLG 169
Query: 337 GQSIRLS 343
+S+++
Sbjct: 170 TRSLKIC 176
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG + G++I + + +Q++
Sbjct: 222 VMTDDNGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTE 275
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|307211508|gb|EFN87603.1| tRNA selenocysteine-associated protein 1 [Harpegnathos saltator]
Length = 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTEQN--FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + + FRLN A+ G+ D +F+I+VGDL+ DV DY L F A Y+
Sbjct: 70 LNGKVIPGSNPSVRFRLNHAS-TTGKPAADR--EFSIWVGDLSTDVDDYSLYRAFAAKYN 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S++ MNG T+ ++I A +
Sbjct: 127 SIRTAKVILD-SSGFSKGYGFVRFANEDEQKNSLSTMNGYRGLGTKSLKICNAVPR 181
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 32/186 (17%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG V+ + P R+ A+T K A +++ +I+VG L
Sbjct: 70 LNGKVIPGSNPSVRFRLNHASTTGKPAADREF--------------------SIWVGDLS 109
Query: 284 PSVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D L F +Y + K+ K GFV+FAN + +LS +NG + LG
Sbjct: 110 TDVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEDEQKNSLSTMNGYRGLG 169
Query: 337 GQSIRL 342
+S+++
Sbjct: 170 TKSLKI 175
>gi|383852956|ref|XP_003701991.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Megachile rotundata]
Length = 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 69/268 (25%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG V+ + P R+ A+T K A +++ +I+VG L
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPAAEREF--------------------SIWVGDLS 109
Query: 284 PSVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 110 TDVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLG 169
Query: 337 GQSIRLS------WGR-------------SPSNKQSD-------QAQWNGGGYYGFAQGY 370
+S+++ W + +PSN SD + WN Y + QGY
Sbjct: 170 TKSLKICNAVPRPWNKIAGSTPPQSSSEYTPSNMNSDAYNYYDTSSYWN--SYSAWQQGY 227
Query: 371 EAYGYAPPTQDPNMYYGGFPGYGTYQQP 398
+ PT D G+ Y + Q+P
Sbjct: 228 YE---SEPTSD------GYNSYVSDQKP 246
>gi|307181029|gb|EFN68803.1| tRNA selenocysteine-associated protein 1 [Camponotus floridanus]
Length = 304
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 181
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG V+ + P R+ A+T K A +++ +I+VG L
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAEREF--------------------SIWVGDLS 109
Query: 284 PSVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 110 TDVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLITMNGYRGLG 169
Query: 337 GQSIRLSWGR-SPSNKQSDQAQW 358
+S+++ P NK S Q +
Sbjct: 170 TKSLKICNAVPRPWNKISGQVNY 192
>gi|332030538|gb|EGI70226.1| tRNA selenocysteine 1-associated protein 1 [Acromyrmex echinatior]
Length = 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ A ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 181
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG V+ + P R+ A+T K A +++ +I+VG L
Sbjct: 70 LNGKVIPGSNPPVRFRLNHASTTGKPAAEREF--------------------SIWVGDLS 109
Query: 284 PSVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 110 TDVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLITMNGYRGLG 169
Query: 337 GQSIRLS 343
+S+++
Sbjct: 170 TKSLKIC 176
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 21/285 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ +++ A ER L+
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ R+ G IF+ +L + + L +TF A + +V
Sbjct: 105 LNYSLIKG--RACRIMWSQRDPALRKTGQG---NIFIKNLDEQIDNKALHDTF-AAFGNV 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD GRSKGYGFV + ++ +NG+L + + + +G ++KA++ ++
Sbjct: 159 LSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRER 217
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR--- 311
K Q T I+V LDP VT D +F Q+G + I ++
Sbjct: 218 QSKLEEMKAQF---------TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQS 268
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV F A++A+ L+ ++ G+ + +S + + ++ +
Sbjct: 269 RGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEE 313
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L P + + +F G V+ VI+ + S G+GF+ F +H A++ ++T
Sbjct: 230 NIYVKNLDPEVTQDDFVKLFEQFGN-VTSAVIQTDEQGQSRGFGFVNFETHEEAQKAVET 288
Query: 135 FNGTQ-------------MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ ++ E+ R ++ + + G +++ +L D+ D
Sbjct: 289 LHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQG--VNLYIKNLEDDIDDE 346
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++ F + S+ AKV+ D G SKG+GFV F E +++ EMN + ++P+ +
Sbjct: 347 RLRQEFEP-FGSITSAKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYV 404
Query: 242 GPAATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 405 S-LAQRREVRRQQLESQIAQRNQ 426
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SQK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTE 275
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 26/289 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S ++ R+ T S GY ++ F+ A A+R L T
Sbjct: 11 SLYVGDLPPDVTENMLFLKFSTVGTVLSIRICRDLVTRCSLGYAYVNFLHVADAQRALDT 70
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + Q+ RL W+ A R+ G +F+ +L + + L E F +V+ +
Sbjct: 71 MNFDVIQG--QSIRLMWSQRDAYLRKSGIG---NVFIKNLDKSIDNKTLYEHF-SVFGKI 124
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+KV+ D S+GYGFV F +++ R++ EMNGVL + +GP ++ +
Sbjct: 125 LSSKVMCDDQG--SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDREAEL 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
KA+ T I++ + D+ LK F YG++V VK+
Sbjct: 183 QNKAS-------------EFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKS 229
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
K GFV F A++A+ ++NG ++ GQ + + + + +Q++ Q
Sbjct: 230 KGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQL 278
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 147/286 (51%), Gaps = 26/286 (9%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
GI +++I +L ++ + F G+ +S KV+ + Q S GYGF+ F + AAA+R
Sbjct: 96 GIGNVFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQG--SRGYGFVHFQNQAAADRA 153
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERR----QDDGPDFT-IFVGDLAADVTDYVLQET 186
++ NG + ++FRL + R Q+ +FT I++ + ++ D L+E
Sbjct: 154 IEEMNGVLL----KDFRLFVGPFKNRRDREAELQNKASEFTNIYIKNFGDEMDDEKLKEF 209
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA-- 244
F + Y + KV+TD ++G+SKG+GFV F R++ +NG + + +G A
Sbjct: 210 F-SHYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAKRAVDIVNGREIFGQQVFVGRAQK 267
Query: 245 -ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A ++A Q +++ + + +G T I+V LD ++ ++ L+ F +G ++
Sbjct: 268 KAERQAELKQLFEQRKQERSWRVRG------TKIYVKNLDETIDEEKLRKAFSSFGSIIR 321
Query: 304 VKI--PAGKRCGF--VQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
VK+ G+ GF + F++ A +A++ +NG LG + + ++
Sbjct: 322 VKVMQEEGRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVNIALA 367
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +AE+ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSAEQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATK 247
R +R+ A K
Sbjct: 182 RAIRVNWANQK 192
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 25/183 (13%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VTDY+L E F AV V AK++ DR YGFV + D +++T
Sbjct: 24 LYVGNLSPRVTDYILTEIF-AVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +R+ A YQ Q E+ ++ +FVG L P V
Sbjct: 83 TLNGRKIFDAEIRVNWA---------------YQGNQNK--EDTQHHYHVFVGDLSPEVN 125
Query: 288 DDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
DD+L FG +G L ++ +GK GF+ F ++ AEQA++ +NG LG ++IR
Sbjct: 126 DDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 342 LSW 344
++W
Sbjct: 186 VNW 188
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFAN 319
Q P ++VG L P VTD IL +F G +V KI G GFV++A+
Sbjct: 14 QSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYAD 73
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQAQWN 359
AEQAL+ LNG ++ IR++W + NK+ Q ++
Sbjct: 74 MRSAEQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYH 114
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT++VG L P T L +F YG +V +++ A + FV+ A A++ L
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 334 QLGGQSIRLSWGR 346
+ G+ I+ SWG+
Sbjct: 316 LVHGRPIKCSWGK 328
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 25/285 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ +++ A ER L+
Sbjct: 50 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 109
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ R+ G IF+ +L + + L +TF A + +V
Sbjct: 110 LNYSLI--KNRPCRIMWSQRDPALRKTGQG---NIFIKNLDEAIDNKALHDTF-AAFGTV 163
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD TGRSKGYGFV + ++ +NG+L + + + +G ++K
Sbjct: 164 LSCKVATDE-TGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRK------ 216
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
Q E T ++V LDP VT D +F +YG + I
Sbjct: 217 -------ERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKS 269
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A+ LN +L G+ + +S + + ++ +
Sbjct: 270 KGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREEE 314
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L P + + +F G V+ VI + S+G+GF+ F +H A++ +
Sbjct: 231 NLYVKNLDPEVTQDEFIELFKKYGN-VTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDE 289
Query: 135 FNGTQM-------------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
N ++ E+ R ++ + + G +++ +L DV D
Sbjct: 290 LNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQG--VNLYIKNLEDDVDDD 347
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+ F + ++ KV+ D G+SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 348 KLRAEFEP-FGTITSCKVMRDEK-GQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 405
Query: 242 GPAATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 406 S-LAQRREVRRQQLESQIAQRNQ 427
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L+P + E+ + IF G S +V R+ T S GY ++ F++ +ER L+
Sbjct: 81 SLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQ 140
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ W+ G+RR G IF+ +L + + L +TF A + +
Sbjct: 141 LNYT--PIRGRPCRIMWSQRDPGQRRAGQG---NIFIKNLDEAIDNKALHDTF-AAFGKI 194
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV ++ S GYGFV + ++ +NG+L + + + +G +KK
Sbjct: 195 LSCKVASNEHG--SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKK------ 246
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR--- 311
+ Q E + T ++V LDP+VT + + +F +YG++ I +
Sbjct: 247 -------DRQAKIEEARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKS 299
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV F+ A +A+ LN T+ GQ + L + S ++ +
Sbjct: 300 RGFGFVNFSEHEQAAKAVEELNDTEFHGQKLFLGRAQKKSEREEE 344
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L P + + +F G+ S I Q S G+GF+ F H A + ++
Sbjct: 261 NVYVKNLDPAVTQEEFEKLFEKYGKITSA-AIATDQEGKSRGFGFVNFSEHEQAAKAVEE 319
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N T+ +E+ L A A + +++ +L D D L
Sbjct: 320 LNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDFDDERL 379
Query: 184 QETFRAVYSSVKGAKVVTDRT-TGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
QE F A + + AKV+ RT TG S+G+GFV + E +++ EMNG + RP+ +
Sbjct: 380 QEEF-APFGTTTSAKVM--RTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVA 436
Query: 243 PAATKKAATGQQYQKATYQNTQ 264
A +K QQ Q+ Q
Sbjct: 437 -LAQRKDVRHQQLAAQMMQHNQ 457
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 24/209 (11%)
Query: 71 DGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIR--------NKQTNFSEGYGFIE 121
D R+LW+GDL PW++E I+ ++ + V+ K+I+ N Q GY F+E
Sbjct: 106 DSPRTLWMGDLDPWLDEGAISDLWWQILHKKVTVKIIKPKTPKPENNAQGLSHSGYCFVE 165
Query: 122 FVSHAAAERVL----QTFNGTQMPSTEQ----------NFRLNWATYGAGERRQDDGPDF 167
F S A++ L Q MPS +Q FRLNWA+ P++
Sbjct: 166 FESFDDAQQALGLNGQLLPDIAMPSQQQFPNNPDNQKKYFRLNWASGATLSAPIVQTPEY 225
Query: 168 TIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++FVGDL+A T+ L F+ + +S+K +V+TD +G+S+ +GFVRF DESE+ R++
Sbjct: 226 SLFVGDLSASTTEAHLLAFFQKSFPTSIKTVRVMTDPVSGKSRCFGFVRFTDESERQRAL 285
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQY 255
EM+G RP+R+ A + +Y
Sbjct: 286 VEMHGAWFGGRPLRVALATPRNVGGKLRY 314
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%)
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+Q + Q Q Q DPNNTT+FVGGL VT+ L T+F +G + VKIP GK C
Sbjct: 401 EQLRSPNLQGGQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNC 460
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
GF+++++R AE+A++ + G +GG +RLSWGR N +
Sbjct: 461 GFIKYSSREEAEEAIAAMQGFIIGGNRVRLSWGRVSMNNK 500
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK FGQYG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ + GFV F A++A+ +NG L G++I + + +Q++
Sbjct: 222 VMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTE 275
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + FG G +S KV+ + S G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK-SRGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG + E+ L + R ++V +L
Sbjct: 244 AQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFTP-FGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 46/226 (20%)
Query: 67 DASSDGIRS-LWIGDLQPWMEESYIASIFGHTG-EFVSGKV-------IRNKQTNFSEGY 117
+ +S+ +RS LW GDL+PWM+E Y + G G + V+ KV +Q N + GY
Sbjct: 167 NTNSNALRSTLWWGDLEPWMDEEYAKQVCGLMGWDPVNIKVPSPGPDPASGQQAN-NPGY 225
Query: 118 GFIEFVSHAAAERVLQTF--NGT----QMPSTEQNFRLNWATYGAGERRQDDGP------ 165
F+ F S + A+ VL NG+ MP++ + F LNWA+ P
Sbjct: 226 CFLTFPSPSLAQSVLAQVANNGSGQPVTMPNSSKPFVLNWASSVPNTPMSSSFPAANVVM 285
Query: 166 ---------DFTIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVT 201
+++IFVGDLA + ++ L FR + S K AK++
Sbjct: 286 SSAQQQYPREYSIFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIML 345
Query: 202 DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
D TG S+GYGFVRF +E++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 346 DPVTGVSRGYGFVRFTEEADQQRALIEMHGLYCLSRPMRISPATAK 391
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 559 RAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHC 618
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 619 GFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 653
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 36/309 (11%)
Query: 32 QQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIA 91
Q Q Q QTP V T PV +G SL++GDL + +S +
Sbjct: 3 QVQLQGQTPNGSTVAVTSAPVTSGGATAAGFGTT---------SLYVGDLDVNVTDSQLF 53
Query: 92 SIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNW 151
F G VS +V R+ T S GYG++ F + A R +Q N +P + R+ +
Sbjct: 54 DAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQELN--YIPLYGKPIRVMY 111
Query: 152 ATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGY 211
+ RR G IF+ +L + L +TF +V+ ++ KV D ++G+SKGY
Sbjct: 112 SHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTF-SVFGNIVSCKVAVD-SSGQSKGY 166
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEND 271
GFV++ +E +++ ++NG+L + + + +GP + Q + +T T+
Sbjct: 167 GFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR------QERDSTANKTK------- 213
Query: 272 PNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGKR--CGFVQFANRTCAEQA 326
T ++V L S TDD LK FG+YG++ V +K GK GFV F N A +A
Sbjct: 214 --FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFENADDAARA 271
Query: 327 LSVLNGTQL 335
+ LNG +
Sbjct: 272 VESLNGHKF 280
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 24/303 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G VS KV + S+GYGF+++ +
Sbjct: 116 PSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDSSGQ-SKGYGFVQYANE 174
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A++ ++ NG + + G RRQ+ + FT ++V +LA T
Sbjct: 175 ESAQKAIEKLNGMLLNDKQ-------VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTT 227
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F Y + A V+ D G+SKG+GFV F + + R++ +NG +
Sbjct: 228 DDDLKNAF-GEYGKITSAVVMKD-GDGKSKGFGFVNFENADDAARAVESLNGHKFDDKEW 285
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + + QN + + + ++ ++V LDPS++D+ LK +F +G
Sbjct: 286 YVG-RAQKKSERETELRVRYEQNLK--EAADKFQSSNLYVKNLDPSISDEKLKEIFSPFG 342
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K+ P G K GFV F+ A +A+S L+G + + + ++ + ++++
Sbjct: 343 TVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRAQ 402
Query: 355 QAQ 357
+Q
Sbjct: 403 FSQ 405
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 45/221 (20%)
Query: 74 RSLWIGDLQPWMEESY---IASIFGHTGEFV-------SGKVIRNKQTNFSEGYGFIEFV 123
++LW+GDL+PWM++ Y + S+FG + + R+ + GY + F
Sbjct: 58 KTLWLGDLEPWMDDHYMLQVCSLFGWETSAIYMPRPPAAPNATRHPN---NAGYCLLIFP 114
Query: 124 SHAAAERVLQTF------NGTQ----MPSTEQNFRLNW--ATYGAGERRQDDGP-----D 166
+H A V++ + N T +P++ + +L+W +T +D GP +
Sbjct: 115 THEKAATVVEQYGLDAMNNSTAQPILLPNSNRPIKLDWLSSTNAKVSIGKDPGPIDNAIE 174
Query: 167 FTIFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGY 211
++IFVGD+AADVT+ L FR A + S AKV+ D TG SKGY
Sbjct: 175 YSIFVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGY 234
Query: 212 GFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
GFVRF E++Q R++ EM G+ C +RPMR+ A K A G
Sbjct: 235 GFVRFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGG 275
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 38/306 (12%)
Query: 75 SLWIGDLQPWMEESYIASIF-----GHTGEF-----------VSGKVIRNKQTNFSEGYG 118
S+++GD+ + + + ++F G G+F + KV+ + T S+GYG
Sbjct: 176 SIFVGDIAADVTNADLMNVFRNPNLGLRGDFPPRLIAPFLSCCNAKVMVDSVTGISKGYG 235
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFV------- 171
F+ F S A +R L G S A AG ++ ++ V
Sbjct: 236 FVRFTSEADQKRALLEMQGLYCKSRPMRLSTATAKNKAGGADEEHQEPMSVVVRVTPATS 295
Query: 172 -GDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM- 229
G L+ D R++ S+V A+ R + R + + + S+ +M +
Sbjct: 296 GGPLSPKSID---PSKIRSITSAV--AEGAASRPSQRGE-FHPMMLAKISQLANTMGQHP 349
Query: 230 ---NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE----NDPNNTTIFVGGL 282
GV P + + ++ +A + G+ + +DP NTT+FVGGL
Sbjct: 350 GYRGGVASVLPPPGLSNSQIQQWLHDNPQARAQLETLLGNGNDPLVPSDPQNTTVFVGGL 409
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
P ++++ L+T F +G + +VK+P GK CGFVQF ++ AE+A+ L+G + G +RL
Sbjct: 410 SPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSDAERAIEALSGFSIAGSKVRL 469
Query: 343 SWGRSP 348
SWGR P
Sbjct: 470 SWGRIP 475
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 62
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 63 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 121
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 122 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 181
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 182 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 232
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 55 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 114
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 115 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 172
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 173 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 218
>gi|281351637|gb|EFB27221.1| hypothetical protein PANDA_001198 [Ailuropoda melanoleuca]
Length = 245
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 88/137 (64%), Gaps = 7/137 (5%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
GY F+EF A AE+ L NG +P + + F+LN+ATYG ++ D+ P++++FVGD
Sbjct: 4 GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGD 60
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R+++E G +
Sbjct: 61 LTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALSECQGAV 119
Query: 234 -CSTRPMRIGPAATKKA 249
++P+R+ A K +
Sbjct: 120 GLGSKPVRLSVAIPKAS 136
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GY FV F D + + + ++NG +P+ P AT Y ATY G Q +
Sbjct: 4 GYCFVEFADLATAEKCLHKING-----KPL---PGATPAKRFKLNY--ATY----GKQPD 49
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCA 323
N P ++FVG L P V D +L F + G++V + K GFV+F +
Sbjct: 50 NSPE-YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQ 108
Query: 324 EQALSVLNGTQ-LGGQSIRLS 343
++ALS G LG + +RLS
Sbjct: 109 KRALSECQGAVGLGSKPVRLS 129
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 62 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIE 121
YG PD S + SL++GDL P +++ + F G + QT S+GYGF++
Sbjct: 44 YGKQPDNSPE--YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVK 101
Query: 122 FVSHAAAERVLQTFNG 137
F +R L G
Sbjct: 102 FTDELEQKRALSECQG 117
>gi|66472532|ref|NP_001018445.1| tRNA selenocysteine 1-associated protein 1 [Danio rerio]
gi|82228819|sp|Q503H1.1|TSAP1_DANRE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName:
Full=tRNA selenocysteine-associated protein 1
gi|63102413|gb|AAH95331.1| Zgc:110606 [Danio rerio]
gi|182888884|gb|AAI64339.1| Zgc:110606 protein [Danio rerio]
Length = 314
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
+ SLW+G+L+P+M+E +I F GE V ++IR+K T + GYGF+E A ER
Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERC 60
Query: 132 LQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
L+ NG +P + F+L+ + YG +Q + F++FV DL DV D +L E F
Sbjct: 61 LRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHY 116
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+SS K+V D G SK GFV F E EQ R++ ++ G + +R+ A+++
Sbjct: 117 HFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSR 174
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 23/197 (11%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
++++G+L + + + F + +V +++ D+ TG++ GYGFV D++ R +
Sbjct: 3 SLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLR 62
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
++NG +P+ P AT + ++ Y G QGE+ + ++FV L P V
Sbjct: 63 KVNG-----KPL---PGATPPKRF--KLSRSNY----GKQGES--STFSLFVSDLTPDVD 106
Query: 288 DDILKTVFGQY------GELVHVKIPAGKRCGFVQFANRTCAEQALSVLNG-TQLGGQSI 340
D +L F + G++V K CGFV F + ++AL L G T LG +++
Sbjct: 107 DGMLYEFFHYHFSSCCSGKIVLDANGHSKCCGFVSFESEREQKRALVDLQGATGLGKKAL 166
Query: 341 RLSWGRSPSNKQSDQAQ 357
RLS S NK+ + ++
Sbjct: 167 RLSLASSRVNKKKESSE 183
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDIKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRVVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 27/299 (9%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
PP+ P AP+A+ + SL+IGDL P + ES + F G +S +V R+ +
Sbjct: 37 PPANMGYPPN-APNATYS-MASLYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRL 94
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GY ++ F A AER L T N + + R+ W+ RR +G IF+ +
Sbjct: 95 SLGYAYVNFQQPADAERALDTMNFEVIHG--RPMRIMWSQRDPAARRAGNG---NIFIKN 149
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + + + +TF +++ ++ KV TD G SKGYGFV F E+ L ++ ++NG+L
Sbjct: 150 LDRVIDNKSIYDTF-SLFGNILSCKVATDE-EGNSKGYGFVHFETEASALTAIEKVNGML 207
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
S + + +G K Q+ ++ GE+ T +F+ + + L
Sbjct: 208 LSDKKVFVG----KFQPRAQRMKEL---------GESGLKYTNVFIKNFGDHLDEKKLTE 254
Query: 294 VFGQYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+F +YGE+ + K GFV F + A +A+ LN + L G ++LS R+
Sbjct: 255 MFSKYGEITSAVVMTDNSGKPKGFGFVAFVDPDAAIKAVDTLNESTLEGTDLKLSVCRA 313
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + ++E + +F GE S V+ + +G+GF+ FV AA + + T
Sbjct: 237 NVFIKNFGDHLDEKKLTEMFSKYGEITSA-VVMTDNSGKPKGFGFVAFVDPDAAIKAVDT 295
Query: 135 FNGTQMPST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
N + + T E+ L + R ++V ++ ++TD
Sbjct: 296 LNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGVNLYVKNIEEEMTDD 355
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L+E F A + S+ AKV+ D GRSKG+GFV F E ++TEMN + +P+ +
Sbjct: 356 GLREHF-ANFGSITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYV 413
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNT 275
A K +A QY + G Q P T
Sbjct: 414 ALAQRKEDRRAQLASQYMQRLATLRMGQQTNGVPGMT 450
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 28/319 (8%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
+P P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 IPSPTAQTSVQVPVSIPAPSPAAVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P E+ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFERPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQL 335
L + +D L+ FG++G + + RC GFV F A A+ +NG L
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Query: 336 GGQSIRLSWGRSPSNKQSD 354
G + + + S ++ +
Sbjct: 295 GDDVLYVGRAQKKSEREEE 313
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 148/300 (49%), Gaps = 24/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + T S+GYGF++F
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKE 186
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG---PDFT-IFVGDLAADVTDY 181
+A+ + NG M + +Q F ++ ER +D+ P FT ++V +L ++ +
Sbjct: 187 ESAQAAIDKLNGMLM-NDKQVFVGHFIRRQ--ERARDENTPTPRFTNVYVKNLPKEIGED 243
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++TF + + A V+ D++ G S+ +GFV F ++ +MNG+ + +
Sbjct: 244 ELRKTF-GKFGVISSAVVMRDQS-GNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYV 301
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A K + +++++ + SQG N +++ LD SV D+ LK +F +Y
Sbjct: 302 GRAQKKSEREEELRRKFEQERINRFEKSQGAN------LYLKNLDDSVDDEKLKEMFSEY 355
Query: 299 GELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
G + K+ P G + GFV ++N A +ALS +NG +G + + ++ + ++++
Sbjct: 356 GNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPLYIALAQRKEDRRA 415
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG YG + V+
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVR 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ + + + +Q++
Sbjct: 222 VMTDDTGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNE 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG+ G +S +V+ + T S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQKAVDD 250
Query: 135 FNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 31/294 (10%)
Query: 54 PPSQQTQPYGVAPDASSDG----IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
PP Q G P A+ SL++GDL + +S + +F G+ VS +V R+
Sbjct: 5 PPQPQVPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDL 64
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
+ S GYG++ + + A R L N T P R+ ++ R+ G I
Sbjct: 65 TSRRSLGYGYVNYSNPVDASRALDVLNFT--PLNGNPIRVMYSHRDPSVRKSGSG---NI 119
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
F+ +L + L +TF A + S+ KV TD ++G+SKG+GFV+F E L+++ ++
Sbjct: 120 FIKNLDKAIDHKALHDTFSA-FGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAIEKL 177
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
NG+L + + + +GP K Q +++ + T+ NN +FV L + +++
Sbjct: 178 NGMLLNDKQVFVGPFLRK------QERESVSEKTKF-------NN--VFVKNLAETTSEE 222
Query: 290 ILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQLGGQ 338
LK +FG++G + V + +C GFV F N A +++ LNG ++ G+
Sbjct: 223 DLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGK 276
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 25/353 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+G+GF++F +
Sbjct: 109 PSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQ-SKGFGFVQFDTE 167
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA + ++ NG + + +Q F + E + +FV +LA ++ L+
Sbjct: 168 EAALKAIEKLNGMLL-NDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKN 226
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + V+ D G+SK +GFV F + + RS+ +NG + +G A
Sbjct: 227 MF-GEFGPITSVVVMRD-GEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQ 284
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + QG N ++V LD S+ DD LK +F +G +
Sbjct: 285 KKSEREVELKSRFEQSVKEAADKYQGAN------LYVKNLDDSIDDDKLKELFTGFGTIT 338
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F++ A +AL+ +NG + + + ++ + ++++ QA
Sbjct: 339 SCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRRARLQA 398
Query: 357 QWNGGGYYGFAQGYEAYG---YAP--PTQDPNMYYGGFPGYGTYQQPG-SYQQ 403
Q++ A G Y P P ++YG P QPG YQQ
Sbjct: 399 QFSQMQPMAMASSVAPRGMPMYPPGGPGIGQQIFYGQAPPTIISSQPGFGYQQ 451
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 146/303 (48%), Gaps = 27/303 (8%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
T+ G +A S ++++GDL P + E+ + +F G S +V R+ T S GY
Sbjct: 62 TRNIGTETNAPSVSSATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYA 121
Query: 119 FIEFVSHAAAERVLQTFNGTQMPST-EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAAD 177
++ F S AER L+T N P T ++ RL W R+ G +F+ +L
Sbjct: 122 YVNFHSMDDAERALETMNFYACPQTRDKPMRLMWKNRDPTIRKSGAG---NVFIKNLDKA 178
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+ + L +TF +V+ ++ KV TD G S GYGFV F + + ++ ++NG+L + +
Sbjct: 179 IDNKTLFDTF-SVFGNILSCKVATD-DEGNSLGYGFVHFENPEDAETAINKVNGMLLNDK 236
Query: 238 PMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV-TDDILKTVFG 296
+ +G Y K + Q + S E T ++ L PS+ T++ ++ +F
Sbjct: 237 QVYVG------------YFK-SRQEREAS--EETHIFTNVYTKNLIPSMCTEEKIRELFS 281
Query: 297 QYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
YGE+ V +P K FV FA CA +A+ LNG G+S+ + + + +
Sbjct: 282 LYGEITSVYVPVDENEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAER 341
Query: 352 QSD 354
+++
Sbjct: 342 EAE 344
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
TI+VGDL +V + L E F A+ V +V D T RS GY +V F + R++
Sbjct: 78 TIYVGDLHPEVNEANLFEVFSAI-GPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALE 136
Query: 228 EMNGVLC---STRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
MN C +PMR+ ++N + ++ N +F+ LD
Sbjct: 137 TMNFYACPQTRDKPMRL-----------------MWKNRDPTIRKSGAGN--VFIKNLDK 177
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQS 339
++ + L F +G ++ K+ GFV F N AE A++ +NG L +
Sbjct: 178 AIDNKTLFDTFSVFGNILSCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQ 237
Query: 340 IRLSWGRSPSNKQSDQ 355
+ + + +S +++ +
Sbjct: 238 VYVGYFKSRQEREASE 253
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 130/325 (40%), Gaps = 30/325 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + + N S GYGF+ F +
Sbjct: 160 PTIRKSGAGNVFIKNLDKAIDNKTLFDTFSVFGNILSCKVATDDEGN-SLGYGFVHFENP 218
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV-----TD 180
AE + NG + N + + Y + ++ + IF ++ T+
Sbjct: 219 EDAETAINKVNGMLL-----NDKQVYVGYFKSRQEREASEETHIFTNVYTKNLIPSMCTE 273
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
++E F ++Y + V D KG+ FV F +++ E+NG + +
Sbjct: 274 EKIRELF-SLYGEITSVYVPVDENE-VPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLY 331
Query: 241 IGPAATKKAATGQQYQKATYQNTQ---GSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K + +KA + + QG N ++V L + ++ L+ F
Sbjct: 332 VGRAQKKAEREAELRRKAENKRAEILKKYQGVN------LYVRNLPDDMDEEGLRKEFSN 385
Query: 298 YGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
+G L ++ + GFV F+ A +A++ +NG +G + + + + K+
Sbjct: 386 FGTLTSCRVMRDDKGVSRGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYVCLAQ---RKE 442
Query: 353 SDQAQWNGGGYYGFAQGYEAYGYAP 377
QAQ A G G P
Sbjct: 443 IRQAQLEAQRIAAAAGGLRIPGAVP 467
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 31/294 (10%)
Query: 54 PPSQQTQPYGVAPDASSDG----IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK 109
PP Q G P A+ SL++GDL + +S + +F G+ VS +V R+
Sbjct: 5 PPQPQVPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDL 64
Query: 110 QTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTI 169
+ S GYG++ + + A R L N T P R+ ++ R+ G I
Sbjct: 65 TSRRSLGYGYVNYSNPVDASRALDVLNFT--PLNGNPIRVMYSHRDPSVRKSGSG---NI 119
Query: 170 FVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEM 229
F+ +L + L +TF A + S+ KV TD ++G+SKG+GFV+F E L+++ ++
Sbjct: 120 FIKNLDKAIDHKALHDTFSA-FGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAIEKL 177
Query: 230 NGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDD 289
NG+L + + + +GP K Q +++ + T+ NN +FV L + +++
Sbjct: 178 NGMLLNDKQVFVGPFLRK------QERESVSEKTKF-------NN--VFVKNLAETTSEE 222
Query: 290 ILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQLGGQ 338
LK +FG++G + V + +C GFV F N A +++ LNG ++ G+
Sbjct: 223 DLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGK 276
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 25/353 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+G+GF++F +
Sbjct: 109 PSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQ-SKGFGFVQFDTE 167
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA + ++ NG + + +Q F + E + +FV +LA ++ L+
Sbjct: 168 EAALKAIEKLNGMLL-NDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLKN 226
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + V+ D G+SK +GFV F + + RS+ +NG + +G A
Sbjct: 227 MF-GEFGPITSVVVMRD-GEGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQ 284
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + QG N ++V LD S+ DD LK +F +G +
Sbjct: 285 KKSEREVELKSRFEQSVKEAADKYQGAN------LYVKNLDDSIDDDKLKELFTGFGTIT 338
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F++ A +AL+ +NG + + + ++ + ++ + QA
Sbjct: 339 SCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKEDRIARLQA 398
Query: 357 QWNGGGYYGFAQGYEAYG---YAP--PTQDPNMYYGGFPGYGTYQQPG-SYQQ 403
Q++ A G Y P P ++YG P QPG YQQ
Sbjct: 399 QFSQMQPMAMASSVAPRGMPMYPPGGPGIGQQIFYGQAPPTIISSQPGFGYQQ 451
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 102 SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
S K+I +N + Y F+EF H A L NG ++ E ++NWAT + +++
Sbjct: 5 SCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK- 59
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D F +FVGDL+ ++T ++ F A + + A+VV D TG+SKGYGFV F ++ +
Sbjct: 60 DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLD 118
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVG 280
++ M G R +R A K A + T Q + ++ P N T++ G
Sbjct: 119 AENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCG 178
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
G+ +TD +++ F +G+++ +++ K FV+F+ A A+ +NGT + G +
Sbjct: 179 GIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 238
Query: 341 RLSWGR 346
+ WG+
Sbjct: 239 KCYWGK 244
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 67 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 126
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 127 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 184
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 185 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 230
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 138/266 (51%), Gaps = 28/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS +V R+ T S GYG++ + S A R L
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 98 LNFT--PFNNKPIRIMYSHRDPSIRKSGTG---NIFIKNLDKTIDHKALHDTFSS-FGNI 151
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+S+GYGFV+F +E ++ ++NG+L + + + +G
Sbjct: 152 LSCKVATD-SSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVG-----------H 199
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
+ + +++ ++ N+ ++V L S T++ LK +FG+YGE+ V ++ GK
Sbjct: 200 FLRKHERDSASNKKFNN-----VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKS 254
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
+C GFV F N A +A+ LNG ++
Sbjct: 255 KCFGFVNFENTDAAAKAVESLNGKKI 280
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
AS+ ++++ +L E + +IFG GE S ++R+ S+ +GF+ F + A
Sbjct: 209 ASNKKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGK-SKCFGFVNFENTDA 267
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + +++ NG ++ +E+ L + + D +++ +L
Sbjct: 268 AAKAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDD 327
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++D L+E F + + + KV+ D +G S+G GFV F E R++ EMNG + +
Sbjct: 328 SISDENLKELF-SDFGMITSCKVMRD-PSGISRGSGFVAFSTPEEASRALAEMNGKMVVS 385
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 386 KPLYVALAQRKE 397
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 27/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ + S GY ++ + + A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + + L +TF A + ++
Sbjct: 96 LNFT--PINGKPIRIMYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCA-FGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G S+GYGFV+F + ++ ++NG+L + + + +GP K Q
Sbjct: 150 LSCKIATD-PSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK------Q 202
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
++ N + S ++V L +VTDD LK +FG+YG + V ++ GK
Sbjct: 203 DRENVSSNIKFS---------NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
RC GFV F N A QA+ LNG + + + + S ++ +
Sbjct: 254 RCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S K+ + + S GYGF++F
Sbjct: 115 PSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKD 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A+ + NG + + G R+QD F+ ++V +L+ VT
Sbjct: 174 ESAQSAIDKLNGMLINDKK-------VFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F Y ++ A V+ D + G+S+ +GFV F + +++ E+NG + + + +
Sbjct: 227 DDELKEMF-GKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKEL 284
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + ++ +N Q + NT +++ L+ ++ D+ L+ +F +YG
Sbjct: 285 YVG-RAQKKSEREMELKEKFEKNVQ--EVAEKFQNTNLYLKNLEENIDDEKLRELFAEYG 341
Query: 300 ELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ + GFV F + A +AL+ +NG +G + + ++ R K
Sbjct: 342 NITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
Query: 354 DQAQWN 359
QAQ++
Sbjct: 402 LQAQFS 407
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVK----IPAGKRCG--FVQFANRTCAEQALS 328
T+++VG L SV D L VF Q G +V V+ I + K G +V + N+ A +AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 329 VLNGTQLGGQSIRLSW-GRSPSNKQS 353
+LN T + G+ IR+ + R PS+++S
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKS 120
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 27/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL ++++ + +F G VS +V R+ + S GY ++ + + A R L+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + + L +TF A + ++
Sbjct: 96 LNFT--PINGKPIRIMYSNRDPSSRKSGTG---NIFIKNLDKSIDNKALYDTFCA-FGNI 149
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G S+GYGFV+F + ++ ++NG+L + + + +GP K Q
Sbjct: 150 LSCKIATD-PSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRK------Q 202
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
++ N + S ++V L +VTDD LK +FG+YG + V ++ GK
Sbjct: 203 DRENVSSNIKFS---------NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKS 253
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
RC GFV F N A QA+ LNG + + + + S ++ +
Sbjct: 254 RCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREME 298
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S K+ + + S GYGF++F
Sbjct: 115 PSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATDP-SGESRGYGFVQFEKD 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A+ + NG + + G R+QD F+ ++V +L+ VT
Sbjct: 174 ESAQSAIDKLNGMLINDKK-------VFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+E F Y ++ A V+ D + G+S+ +GFV F + +++ E+NG + + + +
Sbjct: 227 DDELKEMF-GKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKEL 284
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + ++ +N Q + NT +++ L+ ++ D+ L+ +F +YG
Sbjct: 285 YVG-RAQKKSEREMELKEKFEKNVQ--EVAEKFQNTNLYLKNLEENIDDEKLRELFAEYG 341
Query: 300 ELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ + GFV F + A +AL+ +NG +G + + ++ R K
Sbjct: 342 NITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQRKEDRKAK 401
Query: 354 DQAQWN 359
QAQ++
Sbjct: 402 LQAQFS 407
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVK----IPAGKRCG--FVQFANRTCAEQALS 328
T+++VG L SV D L VF Q G +V V+ I + K G +V + N+ A +AL
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 329 VLNGTQLGGQSIRLSW-GRSPSNKQS 353
+LN T + G+ IR+ + R PS+++S
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKS 120
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIR 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG ++ G+ + + + +Q++
Sbjct: 222 VMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTE 275
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G +S +V+ + + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTD-DSGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A+R + NG +M E+ L + R ++V +L
Sbjct: 244 AQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GLDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 26/292 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +FG+YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVM 223
Query: 307 --PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
P GK GFV F A +A+ +NG + G+ + + + + +Q++
Sbjct: 224 TDPTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAE 275
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD TG+SKG+GFV F E +++ EMNG + + +
Sbjct: 205 ERLKELF-GKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLF 262
Query: 241 IGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A A ++A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKAERQAELKRRFEQLKQERLSRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHEE 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+P+ + A K KA QY Q G + P NT I
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY----MQRIAGMRAL--PANTII 398
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 148/332 (44%), Gaps = 45/332 (13%)
Query: 41 VPPPVGWTPQPVPPPSQQT---------QPYGVA-----------PDASSDGIRSLWIGD 80
VPPP+ PPP+ QP V P ++ + SL+IGD
Sbjct: 4 VPPPMTQVVTSAPPPTAAATVVAGAVAGQPQAVIQQGPPPTNIGYPPNATYSMASLYIGD 63
Query: 81 LQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQM 140
L P + E+ + F G +S +V R+ + S GY ++ F A AER L T N +
Sbjct: 64 LHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVI 123
Query: 141 PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
+ R+ W+ RR +G IF+ +L + + + +TF +++ ++ KV
Sbjct: 124 HG--RPMRIMWSQRDPAARRAGNG---NIFIKNLDRVIDNKSVYDTF-SLFGNILSCKVA 177
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATY 260
TD G SKGYGFV F E ++ ++NG+L S + + +G K Q+ ++
Sbjct: 178 TD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVG----KFQPRAQRMKEL-- 230
Query: 261 QNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG-----KRCGFV 315
GE+ T +FV + + L +F ++GE+ + K GFV
Sbjct: 231 -------GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFV 283
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
FA++ A QA+ LN + L G +LS R+
Sbjct: 284 AFADQDAAGQAVEKLNDSILEGTDCKLSVCRA 315
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ + +++ ++++F GE S V+ + Q +G+GF+ F AA + ++
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFADQDAAGQAVEK 297
Query: 135 FNGTQMPST-------------EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
N + + T E++ L + R ++V ++ D+ D
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++ F + + ++ AKV+ D GRSKG+GFV F E ++T+MN + +P+ +
Sbjct: 358 GLRDHFSS-FGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
A K +A QY + G Q P T ++
Sbjct: 416 ALAQRKEDRRAQLASQYMQRLATLRMGQQASGVPAMTQLY 455
>gi|66516817|ref|XP_623816.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
mellifera]
gi|380017726|ref|XP_003692798.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Apis
florea]
Length = 295
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYG---AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRA 189
NG +P + FRLN A+ ER +F+I+VGDL+ DV DY L F A
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTAER------EFSIWVGDLSTDVDDYSLYRAFAA 123
Query: 190 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
Y+S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 124 KYNSIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 67/267 (25%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+NG V+ + P R+ A+T T ++ +I+VG L
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTAER-------------------EFSIWVGDLST 110
Query: 285 SVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LGG 337
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 111 DVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGT 170
Query: 338 QSIRLS------WGR-------------SPSNKQSD-------QAQWNGGGYYGFAQGYE 371
+S+++ W + +PSN SD + WN Y + QGY
Sbjct: 171 KSLKICNAVPRPWNKLSGSTPPQSSSEYTPSNLNSDAYNYYDTSSYWN--SYSAWQQGYY 228
Query: 372 AYGYAPPTQDPNMYYGGFPGYGTYQQP 398
+ PT D G+ Y + Q+P
Sbjct: 229 E---SEPTSD------GYNSYVSDQKP 246
>gi|227206148|dbj|BAH57129.1| AT4G27000 [Arabidopsis thaliana]
Length = 88
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+L ETF+AVYSSVKGAKVV DRTTGRSKGYGFVRF DES Q+R+MTEMNG CS+RPMR
Sbjct: 1 MLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESGQIRAMTEMNGQYCSSRPMRT 60
Query: 242 GPAATKKAATGQ 253
GPAA KK T Q
Sbjct: 61 GPAANKKPLTMQ 72
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ + G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLHKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S++ +FG G VS +V R+ T S GYG++ + + A R L
Sbjct: 33 SLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARALDM 92
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ RR IF+ +L + + L +TF + + ++
Sbjct: 93 LNFT--PLNGKPIRIMYSFRDPSIRRSGTA---NIFIKNLDKAIDNKALYDTF-STFGAI 146
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD +G+SKGYGFV+F +E + ++NG+L + + + +GP K Q+
Sbjct: 147 LSCKIATD-ASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRK-----QE 200
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI----PAGK 310
+ AT N ++V L S TD+ LK +FG+YG + +
Sbjct: 201 RESAT----------NKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKS 250
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
+C GFV F N A +++ LNG +
Sbjct: 251 KCFGFVNFENADDAARSVEALNGKKF 276
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 139/303 (45%), Gaps = 19/303 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ + S+GYGF++F +
Sbjct: 112 PSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQ-SKGYGFVQFDNE 170
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ NG + + +Q + + E + ++V +L TD L+
Sbjct: 171 ESAKNATDKLNGMLL-NDKQVYVGPFVRKQERESATNKTKFNNVYVKNLLESTTDEDLKN 229
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F Y + A V+ D G+SK +GFV F + + RS+ +NG + +G A
Sbjct: 230 IF-GEYGPITSAVVMQD-GDGKSKCFGFVNFENADDAARSVEALNGKKFDDKEWYVGKAQ 287
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + QG N ++V LD S+ DD L+ +F ++G +
Sbjct: 288 KKTEREVELKGRFEQSLKEAVDKFQGLN------LYVKNLDDSIADDKLRELFSEFGTIT 341
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F+ A +AL+ +NG + + + ++ + ++++ QA
Sbjct: 342 SCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMVASKPLYVALAQRKEDRRARLQA 401
Query: 357 QWN 359
Q++
Sbjct: 402 QFS 404
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQAL 327
+T+++VG L+ +VTD L +FGQ G +V V++ + +R G+V + N A +AL
Sbjct: 31 STSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARAL 90
Query: 328 SVLNGTQLGGQSIRLSWG-RSPSNKQSDQA 356
+LN T L G+ IR+ + R PS ++S A
Sbjct: 91 DMLNFTPLNGKPIRIMYSFRDPSIRRSGTA 120
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P+GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKS 230
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV + A +A+ +NGT+L G+++ + + +Q++
Sbjct: 231 RGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 147/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD +G+S+G+GFV + + +++ EMNG + + +
Sbjct: 205 ERLKEIFDK-YGKTLSVKVMTD-PSGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKMERQAELKRKFEQLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G+ +S KV+ + + S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDP-SGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 26/287 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + E+ + F G +S +V R+ T S GY +I F A AER L
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + + R+ W+ G R+ G IF+ +L + + L +TF + +
Sbjct: 70 DTMNFEVIKG--RPIRIMWSQRDPGLRKSGIG---NIFIKNLDDSIDNKALYDTF-STFG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KVV D S+G+GFV F +++ MNG+L + R + +G ++
Sbjct: 124 NILSCKVVCDENG--SRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHFKSR----- 176
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR- 311
Q + G T I+V + + D+ L+ +F Q+G+ + VK+ +
Sbjct: 177 --------QEREAELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDENG 228
Query: 312 ----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV F A++A+S +NG +LGG+ + + + S +QS+
Sbjct: 229 QSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQKRSERQSE 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ + + M++ + +F G+ +S KV+ ++ S G+GF+ F H A++ +
Sbjct: 192 NIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDENGQ-SRGFGFVNFEKHEEAQKAVSN 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ +E+ L + R + ++V +L + D L
Sbjct: 251 MNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDDEKL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + Y + AKV+T+ G SKG+GFV F E +++TEMNG + ST+P+ +
Sbjct: 311 RKEF-SPYGVITSAKVMTE--GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVAL 367
Query: 244 AATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFV 279
A K KA QY + +G G P T F+
Sbjct: 368 AQRKEERKAILTSQYMQ-RLSTLRGLNGPLFPQPTNYFL 405
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 84
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 85 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 143
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 144 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 203
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 204 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 254
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 137 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 194
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 195 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 240
>gi|322792679|gb|EFZ16553.1| hypothetical protein SINV_16123 [Solenopsis invicta]
Length = 306
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 21 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 80
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + FRLN A+ + + F+I+VGDL+ DV DY L F A Y+
Sbjct: 81 LNGKVIPGSNPPVRFRLNHASTTGKPTTERE---FSIWVGDLSTDVDDYSLYRAFAAKYN 137
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 138 SIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLITMNGYRGLGTKSLKICNAVPR 192
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 21 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 80
Query: 229 MNG-VLCSTRP---MRIGPAATK-KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+NG V+ + P R+ A+T K T +++ +I+VG L
Sbjct: 81 LNGKVIPGSNPPVRFRLNHASTTGKPTTEREF--------------------SIWVGDLS 120
Query: 284 PSVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LG 336
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 121 TDVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLITMNGYRGLG 180
Query: 337 GQSIRLS 343
+S+++
Sbjct: 181 TKSLKIC 187
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 34/232 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 111 PNPPISTQ-QSTAIAADQESISGSELDNKPRTLWMGDLDPWLDENAIQDLWWSILQKKVV 169
Query: 103 GKVIRNKQ----TNF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ K NF + GY F+EF S A+ L + NG +P
Sbjct: 170 VKIIKPKNMKPDINFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 228
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 229 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 288
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A + A
Sbjct: 289 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRNVA 340
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++NR AE+A++ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 331 NGTQLGGQSIRLSWGR-SPSNKQ 352
G +GG +RLSWGR S SNK+
Sbjct: 569 QGFVIGGNRVRLSWGRVSVSNKK 591
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 27/263 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + IF G+ VS +V R+ T S GYG++ + + A R L
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 89
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF A + S+
Sbjct: 90 LNFT--PLNGKPIRVMYSHRDPSIRKSGAG---NIFIKNLDKAIDHKALHDTFSA-FGSI 143
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D ++G+SKGYGFV+F +E L+++ ++NG+L + + + +GP K+ G
Sbjct: 144 LSCKVALD-SSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDG-V 201
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK- 310
K+ + N +FV L + T++ L F ++G L + + GK
Sbjct: 202 VDKSKFNN--------------VFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKS 247
Query: 311 RC-GFVQFANRTCAEQALSVLNG 332
RC GFV F N A +A+ LNG
Sbjct: 248 RCFGFVNFENADDAARAVDTLNG 270
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL +VTD L + F V V +V D TT RS GYG+V + + + R++
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQV-GQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 88
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N + +P+R+ Y + S ++ N IF+ LD ++
Sbjct: 89 VLNFTPLNGKPIRV-----------------MYSHRDPSIRKSGAGN--IFIKNLDKAID 129
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
L F +G ++ K+ K GFVQF N A +A+ LNG L + +
Sbjct: 130 HKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQV 187
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + F G S V+R+ S +GF+ F + A R + T
Sbjct: 209 NVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGK-SRCFGFVNFENADDAARAVDT 267
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + +E+ L + D +++ +L + D L
Sbjct: 268 LNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLDDSIGDDKL 327
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A + ++ KV+ D G S+G GFV F E R++ EMNG + ++P+ +
Sbjct: 328 KELF-APFGTITSCKVMRD-PNGISRGSGFVAFSTPDEASRALVEMNGKMVVSKPLYVAL 385
Query: 244 AATKK 248
A K+
Sbjct: 386 AQRKE 390
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQALS 328
T+++VG LD +VTD L +F Q G++V V++ +R G+V ++N A +AL
Sbjct: 29 TSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 88
Query: 329 VLNGTQLGGQSIRLSWG-RSPSNKQS 353
VLN T L G+ IR+ + R PS ++S
Sbjct: 89 VLNFTPLNGKPIRVMYSHRDPSIRKS 114
>gi|340728040|ref|XP_003402340.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
terrestris]
gi|350417670|ref|XP_003491536.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like [Bombus
impatiens]
Length = 295
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+G L+P+M ES+I + F GE + KV+RN+ T GY F+ F + A +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 135 FNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG +P + FRLN A+ + + F+I+VGDL+ DV DY L F A Y+
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTTERE---FSIWVGDLSTDVDDYSLYRAFAAKYN 126
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
S++ AKV+ D ++G SKGYGFVRF +E EQ S+ MNG T+ ++I A +
Sbjct: 127 SIRTAKVILD-SSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGTKSLKICNAVPR 181
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 67/267 (25%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+++G L +T+ + F + + KV+ +R TG GY FV F + L +M +
Sbjct: 10 LWMGGLEPYMTESFIMNAFHKMGEQPQTVKVMRNRYTGEPAGYCFVHFPTDEMALDAMHK 69
Query: 229 MNG-VLCSTRP---MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
+NG V+ + P R+ A+T T ++ +I+VG L
Sbjct: 70 LNGKVIPGSNPAVRFRLNHASTTGKPTTER-------------------EFSIWVGDLST 110
Query: 285 SVTDDILKTVFG-QYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQ-LGG 337
V D L F +Y + K+ K GFV+FAN + +L +NG + LG
Sbjct: 111 DVDDYSLYRAFAAKYNSIRTAKVILDSSGFSKGYGFVRFANEEEQKNSLVTMNGYRGLGT 170
Query: 338 QSIRLS------WGR-------------SPSNKQSD-------QAQWNGGGYYGFAQGYE 371
+S+++ W + +PSN SD + WN Y + QGY
Sbjct: 171 KSLKICNAVPRPWNKLSGSTPPQSSSEYTPSNLNSDAYNYYDTSSYWN--SYSAWQQGYY 228
Query: 372 AYGYAPPTQDPNMYYGGFPGYGTYQQP 398
+ PT D G+ Y + Q+P
Sbjct: 229 E---SEPTSD------GYNSYISDQKP 246
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 111/191 (58%), Gaps = 11/191 (5%)
Query: 62 YGVAPDASSDGIR--SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEG--- 116
YG+ P S++ + L++G+L P + + + IF G VS K+I+++ NF G
Sbjct: 8 YGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFN 65
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
YGF+E+ +A++ L T NG ++ E R+NWA Y + ++D + +FVGDL+
Sbjct: 66 YGFVEYADMRSADQALTTLNGRKIFDAE--IRVNWA-YQGNQNKEDTQHHYHVFVGDLSP 122
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+V D VL + F A + S+ A+V+ D +G+S+GYGF+ F D+++ +++ MNG +
Sbjct: 123 EVNDDVLSKAFGA-FGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGS 181
Query: 237 RPMRIGPAATK 247
R +R+ A K
Sbjct: 182 RAIRVNWANQK 192
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK-GYGFVRFGDESEQLRSMT 227
++VG+L+ VTDY+L E F AV V AK++ DR YGFV + D +++T
Sbjct: 24 LYVGNLSPRVTDYILTEIF-AVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+NG +R+ A YQ Q E+ ++ +FVG L P V
Sbjct: 83 TLNGRKIFDAEIRVNWA---------------YQGNQNK--EDTQHHYHVFVGDLSPEVN 125
Query: 288 DDILKTVFGQYGELVHVKI----PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIR 341
DD+L FG +G L ++ +GK GF+ F ++ AEQA++ +NG LG ++IR
Sbjct: 126 DDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIR 185
Query: 342 LSWG 345
++W
Sbjct: 186 VNWA 189
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 267 QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-------PAGKRCGFVQFAN 319
Q P ++VG L P VTD IL +F G +V KI G GFV++A+
Sbjct: 14 QSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYAD 73
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
A+QAL+ LNG ++ IR++W + + D
Sbjct: 74 MRSADQALTTLNGRKIFDAEIRVNWAYQGNQNKED 108
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGT 333
NTT++VG L P T L +F YG +V +++ A + FV+ A A++ L
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 334 QLGGQSIRLSWGR 346
+ G+ I+ SWG+
Sbjct: 316 LVHGRPIKCSWGK 328
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S++ +F G+ VS +V R+ T S GYG++ + S A R L
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDM 84
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P R+ ++ R+ G IF+ +L + L +TF A + ++
Sbjct: 85 LNFT--PLNGSPIRIMYSHRDPSVRKSGSG---NIFIKNLDKGIDHKALHDTFSA-FGNI 138
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD ++G+SKGYGFV+F +E +++ ++NG+L + + + +GP K
Sbjct: 139 LSCKVATD-SSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRK------- 190
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAGK- 310
Q + + + NN ++V L + T++ LK FG+YG + V ++ GK
Sbjct: 191 ------QERESAIDKTRFNN--VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKT 242
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
+C GFV F N A A+ LNG +
Sbjct: 243 KCFGFVNFENADDAATAVEALNGKKF 268
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL A+VTD L + F V V +V D TT RS GYG+V + + R++
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQV-GQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALD 83
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N + P+RI Y + S ++ N IF+ LD +
Sbjct: 84 MLNFTPLNGSPIRI-----------------MYSHRDPSVRKSGSGN--IFIKNLDKGID 124
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
L F +G ++ K+ K GFVQF N A++A+ LNG L + +
Sbjct: 125 HKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQV 182
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ +L E + FG G S V+R+ ++ +GF+ F + A ++
Sbjct: 204 NVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGK-TKCFGFVNFENADDAATAVEA 262
Query: 135 FNGTQMPSTE--------QNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG + E +N R N + ++ F +++ +L + D L
Sbjct: 263 LNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRL 322
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ KV+ D G S+G GFV F E +++ EMNG + ++P+ +
Sbjct: 323 KQLF-SPFGTITSCKVMRD-PNGISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVAL 380
Query: 244 AATKK 248
A K+
Sbjct: 381 AQRKE 385
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 261 QNTQGSQGENDPNNTT-IFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---G 313
QN G G N P TT ++VG L+ +VTD L +F Q G++V V++ +R G
Sbjct: 11 QNVNG--GANAPYVTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYG 68
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+V +++ A +AL +LN T L G IR+ + R PS ++S
Sbjct: 69 YVNYSSPQDAARALDMLNFTPLNGSPIRIMYSHRDPSVRKS 109
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 5/231 (2%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H A L NG ++ E ++NWAT + +++ D F +FVGDL+
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSP 67
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++T ++ F A + + A+VV D TG+SKGYGFV F ++ + ++ M G
Sbjct: 68 EITTEDIKSAF-APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 126
Query: 237 RPMRIGPAATKKAATGQQYQKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
R +R A K A + T Q + ++ P N T++ GG+ +TD +++ F
Sbjct: 127 RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF 186
Query: 296 GQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
+G+++ +++ K FV+F+ A A+ +NGT + G ++ WG+
Sbjct: 187 SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 237
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119
Query: 136 NGTQMPSTEQNFRLNWATY-----------GAGERRQDDG------PDFTIFVGDLAADV 178
G + + R NWAT + R +D + T++ G +A+ +
Sbjct: 120 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 177
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 178 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 223
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 142/277 (51%), Gaps = 15/277 (5%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFSEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP-- 178
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG 313
K+T+++ G P+ V + P+ + +++ F +G+++ +++ K
Sbjct: 179 ---KSTFESRSGPLSPRVPDEA---VQSVLPA-PEQLMRQTFSPFGQIMEIRVFPDKGYS 231
Query: 314 FVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
FV+F++ A A+ +NGT + G ++ WG+ ++
Sbjct: 232 FVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETAD 268
>gi|123374542|ref|XP_001297747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878039|gb|EAX84817.1| hypothetical protein TVAG_508040 [Trichomonas vaginalis G3]
Length = 364
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 76 LWIGDLQPWM-EESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
LW+G+ W EES ++ + TG+ S ++K T YGF+ F S A V++
Sbjct: 4 LWVGNTVIWKDEESLMSDVKQMTGKQPKSCWFAKDKSTGTHLNYGFLVFASKNNAAEVIR 63
Query: 134 TFNGTQMPSTEQN-FRLNW--ATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
NGT++P++ N F+L W T+ + F+ +VG L + V + L E F+
Sbjct: 64 LLNGTEVPNSNGNKFKLGWGNTTFESDADTIAKAEGFSCYVGGLPSSVKESELLEFFKRY 123
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ + A+++ D G SKGYGF++F E + ++ +N V P+++
Sbjct: 124 FPNAINARLIRDEK-GNSKGYGFIKFNKHQEVIDAIQTLNNVNFKGHPLKVKE------- 175
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT-DDILKTVFGQYGELVHVKI-PA 308
G Q + +T +N D NTT+F+ +DP V ++ L F QYG ++ VKI P
Sbjct: 176 -GTQNRVSTNENNSL-----DVKNTTLFITNIDPDVVKEETLLQNFHQYGNVLSVKIDPN 229
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQS-IRLSWGR----SPSNKQS 353
+ V T AE A + L+G+Q GG + + WG+ +P KQ+
Sbjct: 230 NQSWATVVMETHTSAESAKNALSGSQFGGTTKAVIEWGKAIDDAPDTKQT 279
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ ++ RR IF+ +L + + L ETF + + ++
Sbjct: 107 LNFAVL--NNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHETFSS-FGTI 160
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E ++ +NG+L + +P+ +GP +K
Sbjct: 161 LSCKVAMDE-AGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP-FLRKQERDHS 218
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+ K + N +FV L S T + L VFG+YG + V + +
Sbjct: 219 FDKTKFNN--------------VFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKS 264
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GF+ F N A +A+ LNG ++
Sbjct: 265 RCFGFINFENPDAASRAVQELNGKKI 290
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 31/309 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV ++ S+G+GF+++
Sbjct: 126 PSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQ-SKGFGFVQYEKE 184
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------TIFVGDLAADVT 179
AA+ +++ NG + G R+Q+ F +FV +L+ T
Sbjct: 185 EAAQNAIKSLNGMLINDKP-------VFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTT 237
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L + F Y S+ A VV G+S+ +GF+ F + R++ E+NG + +
Sbjct: 238 KEDLLKVF-GEYGSITSA-VVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDKEW 295
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + ++++++ QG N +++ LD S+ DD L+ +F
Sbjct: 296 YVGRAQKKSEREMELKRRFEQSLKDAADKYQGLN------LYLKNLDDSIGDDQLRELFS 349
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
+G++ K+ K GFV F+ R A QAL+ +NG + G+ + +++ R
Sbjct: 350 NFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDR 409
Query: 351 KQSDQAQWN 359
K QAQ++
Sbjct: 410 KAMLQAQFS 418
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 34/232 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 109 PNPPISTQ-QSTAIAADQESISGSELDNKPRTLWMGDLDPWLDENAIQDLWWSILQKKVV 167
Query: 103 GKVIRNKQ----TNF----SEGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ K NF + GY F+EF S A+ L + NG +P
Sbjct: 168 VKIIKPKNMKPDINFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 226
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 227 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 286
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A + A
Sbjct: 287 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRNVA 338
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++NR AE+A++ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 331 NGTQLGGQSIRLSWGR-SPSNKQ 352
G +GG +RLSWGR S SNK+
Sbjct: 577 QGFVIGGNRVRLSWGRVSVSNKK 599
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 49/235 (20%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNK------------------ 109
+S++ R+LW+GDL P +E IASI+ G+ V K+I++K
Sbjct: 14 SSNELPRTLWMGDLDPGFDELIIASIWQSLGKSVKVKLIKSKTNALVPINSTSIPNNASS 73
Query: 110 --------------QTNFSE-GYGFIEFVSHAAAERVLQTFNGTQMPSTEQN-------- 146
+TN GY F+EF S A++ L T N T +P+ N
Sbjct: 74 NALEINGVSFIDPNKTNLHHAGYCFVEFESFEDAQQAL-TLNATPIPNISCNTTASKRTN 132
Query: 147 ------FRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVV 200
FRLNWA P+F++FVGDL+ T+ L F+ Y+SVK +V+
Sbjct: 133 DDGKRKFRLNWANGATLHSTILPTPEFSLFVGDLSPFATEADLLSLFQTKYNSVKTVRVM 192
Query: 201 TDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
TD TG S+ +GFVRF +E+E+ ++ EMNGV R +R+ AT + QQ+
Sbjct: 193 TDPITGASRCFGFVRFANETERRNALIEMNGVQFQGRQLRVA-YATPRNNVAQQH 246
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQ 334
TT+FVGGL+P++ + L +F +G + VKIP GK+CGFV++ R AE A++ L G
Sbjct: 445 TTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQGFI 504
Query: 335 LGGQSIRLSWGR 346
+ G IRLSWGR
Sbjct: 505 IMGSPIRLSWGR 516
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G IF+ +L + + L +TF A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F + R++ +MNG+L + R + +G ++K
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK------ 177
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
+ G T +++ + D+ LK +FG++G + VK+
Sbjct: 178 -------EREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKS 230
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 26/292 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVM 223
Query: 307 --PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
P+GK GFV F A QA+ +NG + G+ + + + +Q++
Sbjct: 224 TDPSGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F + Y KV+TD +G+SKG+GFV F + +++ +MNG + + +
Sbjct: 205 ERLKELF-SKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKVERQAELKRKFEQLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + + S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-SGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+P+ + A K KA QY Q G + P NT I
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY----MQRIAGMRAL--PANTII 398
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ + G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLHKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|297725721|ref|NP_001175224.1| Os07g0516900 [Oryza sativa Japonica Group]
gi|255677810|dbj|BAH93952.1| Os07g0516900, partial [Oryza sativa Japonica Group]
Length = 92
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%)
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
LA+DVTD +L+E F+ Y SV+GAKVV D+ TGRSKGYGFVRFGDE+EQ R+MTEMNG
Sbjct: 1 LASDVTDSMLEEAFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGAT 60
Query: 234 CSTRPMRIGPAATKKAATGQQ 254
STR MR+GPAA KK QQ
Sbjct: 61 LSTRQMRLGPAANKKNMGTQQ 81
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S ++ R+K T S GY ++ +
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+ER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 RDSERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKS 230
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV + A +A+ +NGT+L G+++ + + + +Q++
Sbjct: 231 RGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 145/300 (48%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+ D TG+S+G+GFV + + +++ +MNG + + +
Sbjct: 205 ERLKELFDK-YGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A ++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKNERQAELKRKFEMLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|225713382|gb|ACO12537.1| tRNA selenocysteine-associated protein 1 [Lepeophtheirus salmonis]
gi|290463033|gb|ADD24564.1| tRNA selenocysteine 1-associated protein 1 [Lepeophtheirus
salmonis]
Length = 257
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGE--FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+LWIG L+P+M+E +I + GE +S KVI+NK T YGFI F + A +
Sbjct: 6 ALWIGGLEPYMDEEFIRNSLALMGEDKIISIKVIKNKFTGVPASYGFINFEDDSCALMAM 65
Query: 133 QTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAV 190
NG +P++ F+LN + R D +I+VGDL DV D L + F +
Sbjct: 66 HKLNGKIIPNSTPPVRFKLNHNS----TRLMPGEKDSSIWVGDLTPDVDDLTLFKFFSSR 121
Query: 191 YSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPAATK 247
+ S+K AKVV D++ G SKGYGF+RFG+E EQ ++ M GV +P+++ A K
Sbjct: 122 FQSIKSAKVVLDQS-GFSKGYGFIRFGNEQEQQSALISMMGVSGLGAKPIKVSLAIPK 178
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L+T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALETMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALFD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDEHG--SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSVK 221
Query: 306 IP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQTE 275
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 21/195 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTD-ESGTSKGFGFVNFERHED 243
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGD 173
A++ ++ NG ++ + + A GER+ + F ++V +
Sbjct: 244 AQKAVEEMNGKEL--NGKKIYVGRAQ-KKGERQTELKRKFEQLKQDRITRYQGVNLYVKN 300
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + D L++ F + + ++ AKV+ + GR+KG+GFV F E +++TEMNG +
Sbjct: 301 LDDGIDDERLRKEF-SPFGTITSAKVMME--GGRNKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 234 CSTRPMRIGPAATKK 248
+T+P+ I A K+
Sbjct: 358 VATKPLYIALAQRKE 372
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKS 230
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV + A +A+ +NGT+L G+++ + + + +Q++
Sbjct: 231 RGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAE 275
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 145/300 (48%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+ D TG+S+G+GFV + + +++ +MNG + + +
Sbjct: 205 ERLKELFDK-YGKTLSVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A ++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKNERQAELKRKFEMLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDP-TGKSRGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ + + + +Q++
Sbjct: 222 VMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNE 275
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +F G +S +V+ + S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGK-SKGFGFVSFERHEDAQKAVDD 250
Query: 135 FNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 11/248 (4%)
Query: 117 YGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
Y F+EF H +A L N E ++NWAT + D IFVGDL+
Sbjct: 18 YCFVEFSDHQSAASALLAMNKRLCFGKE--MKVNWATSPGNTPKLDTSKHHHIFVGDLSP 75
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
++ L++ F A + + +VV D T +SKGYGFV F +++ ++ MNG +
Sbjct: 76 EIETTQLRDAF-APFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGS 134
Query: 237 RPMRIGPAATKKAATGQQYQKATYQNTQ-----GSQGENDPNNTTIFVGGLDPSVTDDIL 291
R +R A K A Q + +T+ ++ P N T++ GG+ ++++++
Sbjct: 135 RAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGITQGLSEELM 194
Query: 292 KTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR---SP 348
+ F YG + +++ K F++ + A A+ + + + GQ+++ SWG+ P
Sbjct: 195 QKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDP 254
Query: 349 SNKQSDQA 356
+N+Q Q
Sbjct: 255 NNQQQPQV 262
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 37/201 (18%)
Query: 63 GVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEF 122
G P + +++GDL P +E + + F G+ +V+R+ QT S+GYGF+ F
Sbjct: 55 GNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSF 114
Query: 123 VSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR---------------------Q 161
V A AE + T NG + S + R NWAT R Q
Sbjct: 115 VKKADAENAIGTMNGQWLGS--RAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQ 172
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
+ T++ G + +++ ++Q+TF + Y +++ +V D KGY F++ G +
Sbjct: 173 SSPTNCTVYCGGITQGLSEELMQKTFSS-YGAIQEIRVFKD------KGYAFIKVGTKEA 225
Query: 222 QLRSM-----TEMNG--VLCS 235
++ +++NG V CS
Sbjct: 226 ATHAIVATHNSDVNGQTVKCS 246
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG----PAATKKA 249
VKG K++ + + Y FV F D ++ MN LC + M++ P T K
Sbjct: 4 VKGCKIIHEPG---NDPYCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPGNTPKL 60
Query: 250 ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-- 307
T + + IFVG L P + L+ F +G++ ++
Sbjct: 61 DTSKHHH--------------------IFVGDLSPEIETTQLRDAFAPFGDISDCRVVRD 100
Query: 308 ----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG--RSPSNK 351
K GFV F + AE A+ +NG LG ++IR +W + P+N+
Sbjct: 101 PQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANR 150
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S Y ++ F AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G IFV +L + + VL +T A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NIFVKNLDKSINNKVLYDTVSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F R++ +MNG L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE- 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
G++ + PN +++ + D+ LK +FG++G + VK+
Sbjct: 183 ---------LGAKAKEFPN---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTE 275
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L D+ D L
Sbjct: 251 MNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKAF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPLRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ + + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNE 275
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +F G +S +V+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM--------PSTEQNFRLNWATYGAGERRQDDGPDF---TIFVGDLAADVTDYVL 183
NG ++ + ++ R N + +QD + ++V +L + D L
Sbjct: 251 MNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 27/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEM 97
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N +P + R+ ++ RR IF+ +L + + L +TF A + ++
Sbjct: 98 LNF--VPLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHDTFSA-FGAI 151
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SKG+GFV++ E +M +NG+L + +P+ +GP +K
Sbjct: 152 LSCKVATD-DMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGP-FLRKQERDNS 209
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----K 310
+ KA + N +FV L S T + L +F +YG + + G
Sbjct: 210 FDKARFNN--------------VFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKS 255
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
RC GF+ F + A +A+ LNG ++ + + S ++ D
Sbjct: 256 RCFGFINFESPDDAVRAVEELNGKKINDKEWYCGRAQKKSEREMD 300
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + S+G+GF+++
Sbjct: 117 PSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVATDDMGQ-SKGFGFVQYEKE 175
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------TIFVGDLAADVT 179
A+ +++ NG + G R+Q+ F +FV +L+ T
Sbjct: 176 EFAQSAMKSLNGMLINDKP-------VYVGPFLRKQERDNSFDKARFNNVFVKNLSESTT 228
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L + F + Y ++ A VV T G+S+ +GF+ F + +R++ E+NG + +
Sbjct: 229 KEDLVKIF-SEYGNITSA-VVMVGTDGKSRCFGFINFESPDDAVRAVEELNGKKINDKEW 286
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
G A K + ++++++ QG+N +++ LD ++DD L+ +F
Sbjct: 287 YCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQN------LYLKNLDDGISDDQLRELFS 340
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
+G++ K+ K GFV F+ R A QA++ +NG L G+ + +++ R
Sbjct: 341 TFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQRKEER 400
Query: 351 KQSDQAQWN 359
K QAQ++
Sbjct: 401 KAMLQAQFS 409
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 34/230 (14%)
Query: 51 PVPPPSQQTQPYGVAPDASS-------DGIRSLWIGDLQPWMEESYIASIF-GHTGEFVS 102
P PP S Q Q +A D S + R+LW+GDL PW++E+ I ++ + V
Sbjct: 87 PNPPISTQ-QSTAIAADQESTTGSDLDNKPRTLWMGDLDPWLDENAIRDLWWSILQKKVV 145
Query: 103 GKVIR--NKQTNFS------EGYGFIEFVSHAAAERVLQTFNGTQMPST----------- 143
K+I+ N + +FS GY F+EF S A+ L + NG +P
Sbjct: 146 VKIIKPKNMKPDFSFQGLTNSGYCFVEFESFEDAQHAL-SLNGQLLPDIAMPSQSNFPNN 204
Query: 144 ----EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAK 198
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +
Sbjct: 205 PDNQKKYFRLNWASGATLSAPIVQTPEYSLFVGDLSASTTEAHLLAFFQKNFPNSIKTVR 264
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
V+TD +G+S+ +GFVRF +ESE+ R++ EMNG + RP+R+ A +
Sbjct: 265 VMTDPISGKSRCFGFVRFTEESERQRALIEMNGAWFAGRPLRVALATPRN 314
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DPNNTT+FVGGL V++ L T+F +G + VKIP GK CGFV+++ R AE+A++ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 331 NGTQLGGQSIRLSWGR-SPSNKQ 352
G +GG +RLSWGR S SNK+
Sbjct: 521 QGFVIGGNRVRLSWGRVSISNKK 543
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 27/294 (9%)
Query: 59 TQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYG 118
+ PY +P ++ SL++G+L P + E+ + +F G+ S +V R+ T S GY
Sbjct: 46 STPYSASPSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 105
Query: 119 FIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADV 178
++ + + A ER L+ N T + + R+ W+ R+ G +F+ +L A +
Sbjct: 106 YVNYNNTADGERALEDLNYTSIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDAAI 160
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
+ L +TF + + ++ KV D G SKGYGFV + +++ +NG+L + +
Sbjct: 161 DNKALHDTF-SQFGNILSCKVAQDE-LGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKK 218
Query: 239 MRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+ +G K+ + Q E N T +++ +D SV+D+ +F Y
Sbjct: 219 VFVGHHIAKR-------------DRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPY 265
Query: 299 GELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GE+V I + GFV FA+ A +A+ LN + G+ +L GR+
Sbjct: 266 GEVVSATITRDENGKSRGFGFVNFASHESAAKAVEELNDKEFHGK--KLYVGRA 317
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I +L ++ + F G +S KV +++ N S+GYGF+ + + AA + +++
Sbjct: 150 NVFIKNLDAAIDNKALHDTFSQFGNILSCKVAQDELGN-SKGYGFVHYETAEAANQAIKS 208
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQETFRAVYSS 193
NG + + + A + ++ +FT +++ ++ V+D + F Y
Sbjct: 209 VNGMLLNDKKVFVGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEP-YGE 267
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK---KAA 250
V A + D G+S+G+GFV F +++ E+N + + +G A K +
Sbjct: 268 VVSATITRDEN-GKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEE 326
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI 306
+QY+ A + QG N ++V L V DD L+ +F YG + K+
Sbjct: 327 LRRQYEAARMEKASKYQGVN------LYVKNLTDDVDDDKLRELFSSYGTITSAKV 376
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 41/214 (19%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTG-EFVSGKVIR----NKQTNFSEGYGFIEFVSHAAAE 129
+LW GDL+PWM+E Y + + V+ KV N Q + GY F+ F S + A
Sbjct: 183 TLWWGDLEPWMDEEYAKQVCTLMNWDPVNIKVPAGSDANGQHANNPGYCFLTFSSPSVAA 242
Query: 130 RVLQTFNGT------QMPSTEQNFRLNWATYGAGE---------------RRQDDGPDFT 168
VL N MP++ + F +NWAT G + Q +++
Sbjct: 243 SVLNQVNSDGAPQSPTMPNSTKPFTMNWATTMPGACVPSLHSAAGVPLIAQPQQYQKEYS 302
Query: 169 IFVGDLAADVTDYVLQETFR---------------AVYSSVKGAKVVTDRTTGRSKGYGF 213
IFVGDLA + ++ L FR + S K AK++ D TG S+GYGF
Sbjct: 303 IFVGDLAPETSNSDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPVTGVSRGYGF 362
Query: 214 VRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
VRF DE++Q R++ EM+G+ C +RPMRI PA K
Sbjct: 363 VRFTDETDQQRALVEMHGLYCLSRPMRISPATAK 396
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 257 KATYQNTQGSQGE----NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
+A N G GE DP NTT+FVGGL P ++++ L+T F +G++ +VK+P GK C
Sbjct: 556 RAILSNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHC 615
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFVQF + AE+A+ + G +GG IRLSWGRS
Sbjct: 616 GFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 650
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 24/295 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S ++ R+K T S GY ++ +
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF-TIFVGDLAADVTDYVLQ 184
A+R L+T N + + R+ W+ R+ G IF+ +L + + L
Sbjct: 63 VDAKRALETLNFDVIKG--RPVRIMWSQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALY 120
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 121 DTFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 177
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
++K + G T +++ + D+ LK +FG++G + V
Sbjct: 178 KSRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 224
Query: 305 KIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 225 KVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 279
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H
Sbjct: 189 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHED 247
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + R ++V +L
Sbjct: 248 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 307
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 308 GIDDERLRKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 364
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 365 KPLYVALAQRKE 376
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 57/325 (17%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 45 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 102
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERR----------QDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E ++NWAT + +++ Q F +FVGDL+ ++T +
Sbjct: 103 AMNGRKIMGKE--VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDI 160
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F A + + A+VV D TG+SKGYGFV F ++ + ++ +M G R +R
Sbjct: 161 KAAF-APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW 219
Query: 244 AATKKAATGQQYQ-----------------------------------KATYQNTQGSQ- 267
A K A Y+ K T Q + Q
Sbjct: 220 ATRKPPAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQL 279
Query: 268 ------GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRT 321
++ P+N T++ GG+ +T+ +++ F +G+++ +++ K FV+F +
Sbjct: 280 SYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE 339
Query: 322 CAEQALSVLNGTQLGGQSIRLSWGR 346
A A+ +NGT + G ++ WG+
Sbjct: 340 SAAHAIVSVNGTTIEGHVVKCYWGK 364
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 40 EDEMPK-TLYVGNLSRDVTEALILQLFSQI-GPCKNCKMIMD--TAGNDPYCFVEFHEHR 95
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MNG + +++ AT ++ + +T +TQ SQ ++ +FVG
Sbjct: 96 HAAAALAAMNGRKIMGKEVKVN-WATTPSSQKKDTSSSTVVSTQRSQ-----DHFHVFVG 149
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K F +G + ++ K GFV F N+ AE A+ + G
Sbjct: 150 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 209
Query: 335 LGGQSIRLSWG-RSPSNKQS---------DQAQWNGGGYYG 365
LGG+ IR +W R P +S ++ WN G Y
Sbjct: 210 LGGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEKYA 250
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 28/319 (8%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQL 335
L + +D L+ FG++G + + RC GFV F A A+ +NG L
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Query: 336 GGQSIRLSWGRSPSNKQSD 354
G + + + S ++ +
Sbjct: 295 GDDVLYVGRAQKKSEREEE 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + T S+GYGF++F
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKE 186
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG---PDFT-IFVGDLAADVTDY 181
+A+ + NG M + +Q F ++ ER +D+ P FT ++V +L ++ +
Sbjct: 187 ESAQAAIDKLNGMLM-NDKQVFVGHFIRRQ--ERARDENTPTPRFTNVYVKNLPKEIGED 243
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++TF + + A V+ D++ G S+ +GFV F ++ +MNG+ + +
Sbjct: 244 ELRKTF-GKFGVISSAVVMRDQS-GNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYV 301
Query: 242 GPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A + ++ +++++ + SQG N +++ LD SV D+ LK +F +Y
Sbjct: 302 GRAQKKSEREEELRRKFEQERINRFEKSQGAN------LYLKNLDDSVDDEKLKEMFSEY 355
Query: 299 GELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
G + K+ P G + GFV ++N A +ALS +NG +G + + ++ + ++++
Sbjct: 356 GNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 28/270 (10%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
L++GDL + E ++ F G S +V R+ T+ S YG++ + S A A L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
N + + ++ R+ W+ RR G IFV +L++ V + LQE F + + V
Sbjct: 183 NHSLV--LDKPIRVMWSNRDPDARRSGVG---NIFVKNLSSSVDNASLQELF-SKFGDVL 236
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
KV + G S+GYGFV+F + ++ +NG L + R + +
Sbjct: 237 SCKVAKNE-DGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHV-------------- 281
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRC 312
AT+ ND T +++ LD +T++++K F Q+G +V VKI P G
Sbjct: 282 --ATFIKKSERSANNDDKFTNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSL 339
Query: 313 --GFVQFANRTCAEQALSVLNGTQLGGQSI 340
GFV F N A +A S +NG LG +++
Sbjct: 340 GFGFVSFQNPESAIKAQSTMNGMLLGSKAL 369
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 143/282 (50%), Gaps = 17/282 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + + +F G+ +S KV +N+ S GYGF++F S
Sbjct: 201 PDARRSGVGNIFVKNLSSSVDNASLQELFSKFGDVLSCKVAKNEDGT-SRGYGFVQFTSQ 259
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ + NG S + +L+ AT+ ER ++ FT +++ L D+T+ ++
Sbjct: 260 ESADEAIGNLNG----SLFNDRKLHVATFIKKSERSANNDDKFTNLYMKHLDDDITEELV 315
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + + S+ K++ R G S G+GFV F + +++ + MNG+L ++ + +
Sbjct: 316 KLKF-SQFGSIVSVKIMK-RPDGSSLGFGFVSFQNPESAIKAQSTMNGMLLGSKALYV-- 371
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K +QY + ++ + ++ N + +++ + V DD L+ F ++G +
Sbjct: 372 ARAQKKEERKQYLQRLHEEKR-NEIMTRCNESNVYIKNIHDEVDDDALRARFVEFGNITS 430
Query: 304 VKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSI 340
K+ + GFV ++ A+ A++ + G G+ +
Sbjct: 431 AKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPL 472
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S Y ++ F AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G IFV +L + + VL +T A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NIFVKNLDKSINNKVLYDTVSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F R++ +MNG L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE- 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
G++ + PN +++ + D+ LK +FG++G + VK+
Sbjct: 183 ---------LGAKAKEFPN---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A +A+ +NG +L G+ I + + +Q++
Sbjct: 231 KGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A + +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L D+ D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKAF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 65 APDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVS 124
A A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 AATAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQ 62
Query: 125 HAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQ 184
A AER L T N + + R+ W+ R+ G +F+ +L + + L
Sbjct: 63 PADAERALDTMNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALY 117
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+TF A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G
Sbjct: 118 DTFSA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRF 174
Query: 245 ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV 304
++K + G T +++ + D LK +F +YG+ + V
Sbjct: 175 KSRK-------------EREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSV 221
Query: 305 KI---PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K+ P GK GFV + A +A+ +NGT+L G+++ + + +Q++
Sbjct: 222 KVMTDPTGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAE 276
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 147/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 92 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 149
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 150 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDD 205
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD TG+S+G+GFV + + +++ EMNG + + +
Sbjct: 206 QRLKELFDK-YGKTLSVKVMTD-PTGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVF 263
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 264 VGRAQKKMERQAELKRKFEQLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 317
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 318 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 377
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S G+GF+ + H
Sbjct: 186 AKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDP-TGKSRGFGFVSYEKHED 244
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 245 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 304
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 305 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 361
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 362 KPLYVALAQRKEERKAHLTNQY 383
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 28/319 (8%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQL 335
L + +D L+ FG++G + + RC GFV F A A+ +NG L
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Query: 336 GGQSIRLSWGRSPSNKQSD 354
G + + + S ++ +
Sbjct: 295 GDDVLYVGRAQKKSEREEE 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + T S+GYGF++F
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKE 186
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG---PDFT-IFVGDLAADVTDY 181
+A+ + NG M + +Q F ++ ER +D+ P FT ++V +L ++ +
Sbjct: 187 ESAQAAIDKLNGMLM-NDKQVFVGHFIRRQ--ERARDENTPTPRFTNVYVKNLPKEIGED 243
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++TF + + A V+ D++ G S+ +GFV F ++ +MNG+ + +
Sbjct: 244 ELRKTF-GKFGVISSAVVMRDQS-GNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYV 301
Query: 242 GPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A + ++ +++++ + SQG N +++ LD SV D+ LK +F +Y
Sbjct: 302 GRAQKKSEREEELRRKFEQERINRFEKSQGAN------LYLKNLDDSVDDEKLKEMFSEY 355
Query: 299 GELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
G + K+ P G + GFV ++N A +ALS +NG +G + + ++ + ++++
Sbjct: 356 GNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL + +S + +F G+ VS +V R+ + S GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ N T P + R+ ++ RR +G IF+ +L + L +TF A +
Sbjct: 86 EVLNFT--PLHGKPIRIMYSNRDPTIRRSGNG---NIFIKNLDKAIDHKALHDTFSA-FG 139
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KV D ++G+SKGYGFV++ E +++ ++NG+L + + + +GP +K
Sbjct: 140 NILSCKVAVD-SSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGP-FVRKHERD 197
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK-- 310
K + T +FV L S ++ L+ +FG++G + V + +
Sbjct: 198 MAVDKTRF--------------TNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDG 243
Query: 311 --RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GFV F N A +A+ LNG +L
Sbjct: 244 KSRCFGFVNFENAEDAARAVEALNGYKL 271
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF+++ S
Sbjct: 107 PTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQ-SKGYGFVQYDSE 165
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ ++ NG + N + + + +D D T F ++++ L+E
Sbjct: 166 EAAQKAIEKLNGMLL-----NDKQVYVGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEE 220
Query: 186 TFRAVYS---SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
R ++ ++ V+ D G+S+ +GFV F + + R++ +NG + +G
Sbjct: 221 ELRKIFGEFGAITSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVG 279
Query: 243 PAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K + +++++ + SQG N +++ LD S++D+ LK +F YG
Sbjct: 280 RAQKKSEREMELKHRFEQSAKEAVDKSQGLN------LYIKNLDDSISDEKLKELFSPYG 333
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ P+G K GFV F+N A +ALS +NG + + + ++ R +
Sbjct: 334 TITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVSKPLYVALAQRKEERRAR 393
Query: 354 DQAQWN 359
QAQ++
Sbjct: 394 LQAQFS 399
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRT 321
G N+ T+++VG LD +VTD L +F Q G++V V++ +R G+V + N
Sbjct: 20 GVNNQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQ 79
Query: 322 CAEQALSVLNGTQLGGQSIRLSW-GRSPSNKQS 353
A +AL VLN T L G+ IR+ + R P+ ++S
Sbjct: 80 DAARALEVLNFTPLHGKPIRIMYSNRDPTIRRS 112
>gi|116181152|ref|XP_001220425.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
gi|88185501|gb|EAQ92969.1| hypothetical protein CHGG_01204 [Chaetomium globosum CBS 148.51]
Length = 183
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 51/194 (26%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTNFSEGYGFIEFVSHA 126
+S++ ++LW+G+++ WM+E++I +I GE V KVIR++ +
Sbjct: 35 SSNEAAKTLWMGEMEGWMDETFIKNICRTVLGEDVQVKVIRDRNSG-------------- 80
Query: 127 AAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQET 186
D GP+++IFVGDL +V ++VL
Sbjct: 81 ----------------------------------DDRGPEYSIFVGDLGPEVNEFVLVSL 106
Query: 187 FRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA- 245
F++ + S K AK++TD TG+S+GYGFVRF DES+Q R++ EM GV C RPMRI A
Sbjct: 107 FQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALVEMQGVYCGNRPMRISTATP 166
Query: 246 -TKKAATGQQYQKA 258
T+ A T + K
Sbjct: 167 KTRMAVTAKPRPKV 180
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 28/319 (8%)
Query: 41 VPPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEF 100
VP P T VP P VA + SL+ GDL P + E+++ +F H
Sbjct: 18 VPSPTAQTSVQVPVSIPLPSPVVVADQTHPNS--SLYAGDLDPKVTEAHLFDLFKHVANV 75
Query: 101 VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERR 160
VS +V R+ Q S GY +I F + A R ++ N T P ++ R+ + R
Sbjct: 76 VSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYT--PLFDRPIRIMLSNRDPSTRL 132
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
G IF+ +L A + + L ETF + + ++ KV D TGRSKGYGFV+F E
Sbjct: 133 SGKG---NIFIKNLDASIDNKALFETFSS-FGTILSCKVAMD-VTGRSKGYGFVQFEKEE 187
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ ++NG+L + + + +G ++ ++A +NT P T ++V
Sbjct: 188 SAQAAIDKLNGMLMNDKQVFVGHFIRRQ-------ERARDENTP------TPRFTNVYVK 234
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKI----PAGKRC-GFVQFANRTCAEQALSVLNGTQL 335
L + +D L+ FG++G + + RC GFV F A A+ +NG L
Sbjct: 235 NLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Query: 336 GGQSIRLSWGRSPSNKQSD 354
G + + + S ++ +
Sbjct: 295 GDDVLYVGRAQKKSEREEE 313
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 152/313 (48%), Gaps = 24/313 (7%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + T S+GYGF++F
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKE 186
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG---PDFT-IFVGDLAADVTDY 181
+A+ + NG M + +Q F ++ ER +D+ P FT ++V +L ++ +
Sbjct: 187 ESAQAAIDKLNGMLM-NDKQVFVGHFIRRQ--ERARDENTPTPRFTNVYVKNLPKEIGED 243
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L++TF + + A V+ D++ G S+ +GFV F ++ +MNG+ + +
Sbjct: 244 ELRKTF-GKFGVISSAVVMRDQS-GNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYV 301
Query: 242 GPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A + ++ +++++ + SQG N +++ LD SV D+ LK +F +Y
Sbjct: 302 GRAQKKSEREEELRRKFEQERINRFEKSQGAN------LYLKNLDDSVDDEKLKEMFSEY 355
Query: 299 GELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
G + K+ P G + GFV ++N A +ALS +NG +G + + ++ + ++++
Sbjct: 356 GNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
Query: 354 DQAQWNGGGYYGF 366
G GF
Sbjct: 416 HLQIRAPGPMSGF 428
>gi|385302688|gb|EIF46808.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 257
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 18/196 (9%)
Query: 76 LWIGDLQPWMEESYI----ASIFGHTGEFV-SGKVIRNKQTN----FSEGYGFIEFVSHA 126
LW+G+L +E I A++ G G + S K+IR++Q + + GY F+ F +
Sbjct: 40 LWMGELDQRWDEITIRQIWAALLGPMGIXIHSVKLIRDRQXSQMGLSNAGYCFVRFYNXE 99
Query: 127 AAERVLQTFNGTQMPST--EQNFRLNW-------ATYGAGERRQDDGPDFTIFVGDLAAD 177
A +VL FN +P + + FRLNW A + + P+F+IFVGDL
Sbjct: 100 DASKVLTMFNXKPIPGSAGRRFFRLNWSSANIQAAAATSTXLPESAAPEFSIFVGDLPQG 159
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+T+++L ETF A Y S AKV+ D+ TGR +G+GFV+F +E+ R++TEM + R
Sbjct: 160 ITEHLLYETFHARYPSCASAKVMIDQNTGRVRGFGFVKFFXNAERQRALTEMQDYVLLGR 219
Query: 238 PMRIGPAATKKAATGQ 253
P+R+ P A Q
Sbjct: 220 PIRVSPXDAXVAEFAQ 235
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 108/241 (44%), Gaps = 51/241 (21%)
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
+ GY F++F S AAA + L + NGT MP+T + F+LNWAT G R
Sbjct: 71 NAGYCFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNWATGGGLADR------------- 116
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
R VY G + +T + E+ R
Sbjct: 117 --------------RGVYC---GKPLPCASSTAHPQ---------ETRGPR--------C 142
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGEN---DPNNTTIFVGGLDPSVTDDI 290
CS PA T +T Q N DPNNTT+FVGGL VT+D
Sbjct: 143 CSPGANGYAPARTAACNLPDGPPPPIGPSTGAPQPMNQFTDPNNTTVFVGGLSGYVTEDE 202
Query: 291 LKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN 350
L++ F +GE+ +VKIP GK CGFVQF R AE A++ + G +G +RLSWGRS +N
Sbjct: 203 LRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 262
Query: 351 K 351
Sbjct: 263 S 263
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 54 PPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNF 113
P + +T+ D +S SL++G+L P + E+ + IF G S +V R+ T
Sbjct: 33 PAASETEANNSNVDTTS---ASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKT 89
Query: 114 SEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGD 173
S GY ++ F H + ++ N + P + R+ W+ R++ G IF+ +
Sbjct: 90 SLGYAYVNFNDHESGRTAIEKLNYS--PIKGKPCRIMWSQRDPALRKKGAG---NIFIKN 144
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L D+ + L +TF +V+ ++ K+ TD TG+SKG+GFV F +++ + ++ +NG++
Sbjct: 145 LHPDIDNKALHDTF-SVFGNILSCKIATDE-TGKSKGFGFVHFEEDNAAVEAVDAINGMM 202
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
+ R + + +KK + + E N T ++V +D +D
Sbjct: 203 LNGREVYVAQHVSKK-------------DRESKLEEVKANFTNVYVKNVDVDTPEDEFTA 249
Query: 294 VFGQYGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+F +YG + + + GF+ F N A +A+ LN + GQ +L GR+
Sbjct: 250 LFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQ--KLYVGRA 306
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 35/196 (17%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VG+L V++ +L + F + V +V D T S GY +V F D ++
Sbjct: 51 SLYVGELDPSVSEALLYDIFSPI-GPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIE 109
Query: 228 EMNGVLCSTRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++N +P RI PA KK A IF+ L
Sbjct: 110 KLNYSPIKGKPCRIMWSQRDPALRKKGAG------------------------NIFIKNL 145
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGG 337
P + + L F +G ++ KI K GFV F A +A+ +NG L G
Sbjct: 146 HPDIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNG 205
Query: 338 QSIRLSWGRSPSNKQS 353
+ + ++ S +++S
Sbjct: 206 REVYVAQHVSKKDRES 221
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ E ++F G S + ++ + F G+GFI F +H A + ++
Sbjct: 232 NVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKF-RGFGFINFENHDDAAKAVEE 290
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGDLAADVTD 180
N + + Y ER Q+ + +FV +L + D
Sbjct: 291 LNDLEFKGQKLYVGRAQKKY---ERLQELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDD 347
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+ F A + S+ AKV+ + G+SK +GFV F E +++TE N + + +P+
Sbjct: 348 EKLEAEF-APFGSITSAKVMRNEE-GKSKNFGFVCFSTPEEATKAITEKNQQIVAGKPLY 405
Query: 241 IGPAATKKAATGQQYQKATYQN 262
+ A K Q Q+ +N
Sbjct: 406 VAIAQRKDVRRSQLAQQIQARN 427
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG + G+S+ + + +Q++
Sbjct: 222 VMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTE 275
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFLP-FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ P GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKS 230
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GF+ + A +A+ +NGT+L G+++ + + +Q++
Sbjct: 231 RGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAE 275
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 146/300 (48%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMND 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD TG+S+G+GF+ + + +++ +MNG + + +
Sbjct: 205 ERLKELFDK-YGKTLSVKVMTD-PTGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A ++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKMERQAELKRKFEMLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +F G+ +S KV+ + T S G+GFI + H
Sbjct: 185 AKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDP-TGKSRGFGFISYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+P+ + A K KA QY Q G + P NT I
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYM----QRIAGMRAM--PANTII 398
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG + G+S+ + + +Q++
Sbjct: 222 VMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTE 275
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M + + +FG G +S KV+ + S+G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG M E+ L + R ++V +L
Sbjct: 244 AQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEFLP-FGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 112/227 (49%), Gaps = 33/227 (14%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHT-GEFVSGKVIRNKQTN------------FSEGYGFI 120
R+LW+GDL PW++E I ++ + VS K+IR K GY FI
Sbjct: 79 RTLWMGDLDPWLDELGIEHLWWQILRKKVSIKLIRPKIPKQDMGYNMYSGGLSHSGYCFI 138
Query: 121 EFVSHAAAERVLQTFNG-----------TQMPSTEQN----FRLNWATYGAGERRQDDGP 165
EF + A+ L + NG TQ P+ N FRLNWA+ P
Sbjct: 139 EFETFEDAKYAL-SLNGQLLPDVAIPSQTQFPNNPDNQKKYFRLNWASGATLSAPIVQSP 197
Query: 166 DFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
++++FVGDL+A T+ L F+ + SVK +V+TD G+S+ +GFVRF DESE+ R
Sbjct: 198 EYSLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQR 257
Query: 225 SMTEMNGVLCSTRPMRIG---PAATKKAATGQQYQKATYQNTQGSQG 268
++ EMNGV RP+R+ P KK+ Q+ Y G G
Sbjct: 258 ALHEMNGVWFGGRPLRVALATPRYNKKSFDKPPPQEMMYMTPFGFYG 304
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 14/285 (4%)
Query: 75 SLWIGDLQPWMEESYIASIFGHT--GEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
SL++GDL E+++ + F + + +V+ + S +GF+ F + +R L
Sbjct: 200 SLFVGDLSASTTEAHLLAFFQKSFPRSVKTVRVMTDPVNGKSRCFGFVRFTDESERQRAL 259
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
NG + R+ AT ++ D P + +T + T
Sbjct: 260 HEMNGVWF--GGRPLRVALATPRYNKKSFDKPPPQEMMY------MTPFGFYGTSPLPPP 311
Query: 193 SVKGAKVVT--DRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAA 250
+ D S G S + + G L PM +
Sbjct: 312 GSGPGVPMAHLDEDAPSSDSASLGASGPSSPGMFAQGPAQGQLTQAPPMGMPINGFNSPM 371
Query: 251 TGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK 310
G + N Q Q NDP NTT+FVGGL V++ L +F +G + +KIP GK
Sbjct: 372 MGPP--RTPILNNQHGQPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGK 429
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
CGFV+++ R AE A++ + G +GG +RLSWGR N + Q
Sbjct: 430 NCGFVKYSTREEAEDAIASMQGYIIGGNRVRLSWGRVSVNNKKFQ 474
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVK 195
+G + + + ++NWAT + +++ D F +FVGDL+ ++T ++ F A + +
Sbjct: 198 DGRRRAAPDSEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAF-APFGKIS 255
Query: 196 GAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQY 255
A+VV D TG+SKGYGFV F ++ + ++ M G R +R A K A
Sbjct: 256 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQ 315
Query: 256 QKATYQ-NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGF 314
+ T Q + ++ P N T++ GG+ +TD +++ F +G+++ +++ K F
Sbjct: 316 ENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSF 375
Query: 315 VQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN-----KQSDQAQW 358
V+F+ A A+ +NGT + G ++ WG+ + +Q D +QW
Sbjct: 376 VRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQW 424
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL P + I S F G+ +V+++ T S+GYGF+ F + AE +
Sbjct: 230 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 289
Query: 136 NGTQMPSTEQNFRLNWATYG--AGERRQDDG---------------PDFTIFVGDLAADV 178
G + + R NWAT A + Q++ + T++ G +A+ +
Sbjct: 290 GGQWLGG--RQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGL 347
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 231
TD ++++TF + + + +V + KGY FVRF ++ +NG
Sbjct: 348 TDQLMRQTF-SPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNG 393
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 43/287 (14%)
Query: 11 DQTSQYQQQHQQWMAYQ----QQSQQQQQQHQTPVPPPVGWTPQPVPPPSQQTQPYGVAP 66
++ S Y Q AY Q +++ + +P P T + ++Q P G
Sbjct: 62 EEVSIYSQDKSSSHAYDISGPQVHLKRKSSDMSVLPEPPLSTKESSAAATKQHGPLG--- 118
Query: 67 DASSDGIRSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR--NKQTNF------SEGY 117
+ R+LW+GDL PW++E+ IA + + + V+ K+IR + +T+F GY
Sbjct: 119 --HQENPRTLWMGDLDPWLDEAAIADLWYDVLKKRVNVKLIRPRSHKTDFPYHGVSHLGY 176
Query: 118 GFIEFVSHAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQD 162
F+EF + A+ L + NG +P + ++ FRLNWA +
Sbjct: 177 CFVEFDNLYDAQLAL-SLNGKPLPESAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPII 235
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
P+F++FVGDL+A T+ L F++ Y SVK +V+TD +G+S+ +GFVRF DE
Sbjct: 236 HTPEFSLFVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHA 295
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQG 268
+ +++ EM G R +R+ A+ K A NT GS G
Sbjct: 296 RSKALVEMQGTWFGGRQLRVALASPKTNAKA--------GNTNGSPG 334
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVL 330
DP NTT+FVGGL V D L +F +G + VKIP GK CGF++++ R AE A++ +
Sbjct: 420 DPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDAIASM 479
Query: 331 NGTQLGGQSIRLSWGRSPSNKQ 352
G +GG +RLSWG+ +N +
Sbjct: 480 QGFIIGGNRVRLSWGKVSTNNK 501
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 21/239 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT-------GRSK-GYGFVRFGDE 219
T+++GDL + + + + + V K++ R+ G S GY FV F +
Sbjct: 125 TLWMGDLDPWLDEAAIADLWYDVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNL 184
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN--TQGSQGENDPNNTTI 277
+ +++ +NG M ++ ++Y + + N T + + P ++
Sbjct: 185 YDAQLALS-LNGKPLPESAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPIIHTPE-FSL 242
Query: 278 FVGGLDPSVTDDILKTVF-GQYGELVHV------KIPAGKRC-GFVQFANRTCAEQALSV 329
FVG L S T+ L F +Y E V + RC GFV+F++ +AL
Sbjct: 243 FVGDLSASTTEAHLLAFFQSKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVE 302
Query: 330 LNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQG-YEAYGYAPPTQDPNMYYG 387
+ GT GG+ +R++ +N ++ + G Y Q ++A G P P YYG
Sbjct: 303 MQGTWFGGRQLRVALASPKTNAKAGNTNGSPGFYNVLPQHFFQAPGGLPLATSPFGYYG 361
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 49/339 (14%)
Query: 34 QQQHQTPV---PPPVGWTPQPVPPPSQQTQPYGVAPDASSDGIR-SLWIGDLQPWMEESY 89
Q QHQ+PV PPP G AP+ ++ + SL++GDL + +S
Sbjct: 5 QVQHQSPVSAAPPPNGGVAN--------------APNNANQFVTTSLYVGDLDQNVNDSQ 50
Query: 90 IASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRL 149
+ +F G+ VS +V R+ T S GYG++ F + A R L N T P ++ R+
Sbjct: 51 LYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFT--PLNNRSIRI 108
Query: 150 NWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSK 209
++ R+ IF+ +L + L +TF + + + K+ TD +G SK
Sbjct: 109 MYSHRDPSLRKSGTA---NIFIKNLDKAIDHKALHDTFSS-FGLILSCKIATD-ASGLSK 163
Query: 210 GYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGE 269
GYGFV+F +E ++ ++NG+L + + + +G K Q+ + + +
Sbjct: 164 GYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRK-------------QDRENALSK 210
Query: 270 NDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGK-RC-GFVQFANRTCAE 324
NN ++V L S TD+ L FG+YG + I GK RC GFV F N A
Sbjct: 211 TKFNN--VYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAA 268
Query: 325 QALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGY 363
+A+ LNG + + W + K+S++ Q G +
Sbjct: 269 KAVEGLNGKKFDDK----EWYVGKAQKKSEREQELKGRF 303
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K I + S+GYGF++F +
Sbjct: 115 PSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCK-IATDASGLSKGYGFVQFDNE 173
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT------IFVGDLAADVT 179
AA+ + NG + + G R+QD + ++V +L+ T
Sbjct: 174 EAAQNAIDKLNGMLINDKQ-------VYVGHFLRKQDRENALSKTKFNNVYVKNLSESTT 226
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L F Y ++ A ++ D G+S+ +GFV F + + +++ +NG +
Sbjct: 227 DEELMINF-GEYGTITSALIMRD-ADGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEW 284
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A +K + +Q K ++ + + P +++ LD +++D+ LK +F YG
Sbjct: 285 YVGKA--QKKSEREQELKGRFEQSIKEAADKYPG-LNLYLKNLDDTISDEKLKEMFADYG 341
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ P G + GFV F+ A +AL +NG G+ + ++ R +
Sbjct: 342 TITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKEERRAR 401
Query: 354 DQAQWN 359
QAQ++
Sbjct: 402 LQAQFS 407
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S I SL++GDL + E+ + F G VS +V R+ T S GY ++ F
Sbjct: 3 PGAPSYPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + Q R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--QPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D S+GYGFV F R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +F ++G V+
Sbjct: 175 SRK-------------EREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVR 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ G+ GFV F N A++A+ +NG +L G+ + + + +Q +
Sbjct: 222 VMTDESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKMERQME 275
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + IF G S +V+ + ++ G+GF+ F +H A++ +
Sbjct: 192 NVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGSITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 27/269 (10%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G SL++GDL + +S + FG G V+ +V R+ T S GYG++ F + A R
Sbjct: 34 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 93
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+Q N +P + R+ ++ RR G IF+ +L + L +TF + +
Sbjct: 94 IQELN--YIPLYGKPIRVMYSHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTFSS-F 147
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
++ KV D ++G+SKGYGFV++ +E +++ ++NG+L + + + +GP +
Sbjct: 148 GNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR---- 202
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPA 308
Q + +T T+ T ++V L S TDD LK FG+YG++ V +K
Sbjct: 203 --QERDSTANKTK---------FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE 251
Query: 309 GKR--CGFVQFANRTCAEQALSVLNGTQL 335
GK GFV F N A +A+ LNG +
Sbjct: 252 GKSKGFGFVNFENADDAARAVESLNGHKF 280
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G VS KV + S+GYGF+++ +
Sbjct: 116 PSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQ-SKGYGFVQYANE 174
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A++ ++ NG + + G RRQ+ + FT ++V +LA T
Sbjct: 175 ESAQKAIEKLNGMLLNDKQ-------VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTT 227
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F Y + A V+ D G+SKG+GFV F + + R++ +NG +
Sbjct: 228 DDDLKNAF-GEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEW 285
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + + QN + + + ++ ++V LDPS++D+ LK +F +G
Sbjct: 286 YVG-RAQKKSERETELRVRYEQNLK--EAADKFQSSNLYVKNLDPSISDEKLKEIFSPFG 342
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ P G K GFV FA A +A+S L+G + + + ++ R +
Sbjct: 343 TVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVR 402
Query: 354 DQAQWN 359
QAQ++
Sbjct: 403 LQAQFS 408
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQAL 327
NT+++VG LD +VTD L FGQ G +V V++ +R G+V F N A +A+
Sbjct: 35 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94
Query: 328 SVLNGTQLGGQSIRLSWG-RSPSNKQS 353
LN L G+ IR+ + R PS ++S
Sbjct: 95 QELNYIPLYGKPIRVMYSHRDPSVRRS 121
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ F + A R L+
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P + R+ ++ RR IF+ +L + + L ETF + + ++
Sbjct: 101 LNFA--PLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKMIDNKSLHETFSS-FGTI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E ++ +NG+L + +P+ +GP +K
Sbjct: 155 LSCKVAMDE-GGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP-FLRKQERDHS 212
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
+ K + N +FV L S T + L +FG+YG + V + +
Sbjct: 213 FDKTKFNN--------------VFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKS 258
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GF+ F N A +A+ LNG ++
Sbjct: 259 RCFGFINFENPDAASRAVQELNGKKI 284
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 31/309 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV ++ S+G+GF+++
Sbjct: 120 PSSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTILSCKVAMDEGGQ-SKGFGFVQYEKE 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF------TIFVGDLAADVT 179
AA+ +++ NG + G R+Q+ F +FV +L+ T
Sbjct: 179 EAAQNAIKSLNGMLINDKP-------VFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTT 231
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
L + F Y ++ A VV G+S+ +GF+ F + R++ E+NG + +
Sbjct: 232 KEDLLKIF-GEYGNITSA-VVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDKEW 289
Query: 240 RIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFG 296
+G A K + +++++ QG N +++ LD S+ DD L+ +F
Sbjct: 290 YVGRAQKKSEREMELKRRFEQILKDAADKYQGLN------LYLKNLDDSIGDDQLRELFS 343
Query: 297 QYGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSN 350
+G++ K+ K GFV F+ R A QAL+ +NG + G+ + +++ R
Sbjct: 344 NFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDR 403
Query: 351 KQSDQAQWN 359
K QAQ++
Sbjct: 404 KAMLQAQFS 412
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 27/269 (10%)
Query: 72 GIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERV 131
G SL++GDL + +S + FG G V+ +V R+ T S GYG++ F + A R
Sbjct: 18 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 77
Query: 132 LQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
+Q N +P + R+ ++ RR G IF+ +L + L +TF + +
Sbjct: 78 IQELN--YIPLYGKPIRVMYSHRDPSVRRSGAG---NIFIKNLDESIDHKALHDTFSS-F 131
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAAT 251
++ KV D ++G+SKGYGFV++ +E +++ ++NG+L + + + +GP +
Sbjct: 132 GNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRR---- 186
Query: 252 GQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPA 308
Q + +T T+ T ++V L S TDD LK FG+YG++ V +K
Sbjct: 187 --QERDSTANKTK---------FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE 235
Query: 309 GKR--CGFVQFANRTCAEQALSVLNGTQL 335
GK GFV F N A +A+ LNG +
Sbjct: 236 GKSKGFGFVNFENADDAARAVESLNGHKF 264
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G VS KV + S+GYGF+++ +
Sbjct: 100 PSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQ-SKGYGFVQYANE 158
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD-----DGPDFT-IFVGDLAADVT 179
+A++ ++ NG + + G RRQ+ + FT ++V +LA T
Sbjct: 159 ESAQKAIEKLNGMLLNDKQ-------VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTT 211
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F Y + A V+ D G+SKG+GFV F + + R++ +NG +
Sbjct: 212 DDDLKNAF-GEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEW 269
Query: 240 RIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G A KK+ + + QN + + + ++ ++V LDPS++D+ LK +F +G
Sbjct: 270 YVG-RAQKKSERETELRVRYEQNLK--EAADKFQSSNLYVKNLDPSISDEKLKEIFSPFG 326
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ P G K GFV FA A +A+S L+G + + + ++ R +
Sbjct: 327 TVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVR 386
Query: 354 DQAQWN 359
QAQ++
Sbjct: 387 LQAQFS 392
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQAL 327
NT+++VG LD +VTD L FGQ G +V V++ +R G+V F N A +A+
Sbjct: 19 NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 78
Query: 328 SVLNGTQLGGQSIRLSWG-RSPSNKQS 353
LN L G+ IR+ + R PS ++S
Sbjct: 79 QELNYIPLYGKPIRVMYSHRDPSVRRS 105
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 31/268 (11%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + +S + +F G+ VS +V R+ T S GYG++ + + A R L
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P + R+ ++ R+ G IF+ +L + L +TF + + ++
Sbjct: 95 LNFT--PLNNRPIRIMYSHRDPSIRKSGQG---NIFIKNLDKAIDHKALHDTFSS-FGNI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK--KAATG 252
KV D +G+SKGYGFV+F E +++ ++NG+L + + + +GP K + +TG
Sbjct: 149 LSCKVAVD-GSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTG 207
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG 309
+A + N +FV L S TDD LK FG++G + V ++ G
Sbjct: 208 ---DRAKFNN--------------VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDG 250
Query: 310 K-RC-GFVQFANRTCAEQALSVLNGTQL 335
K +C GFV F + A +A+ LNG ++
Sbjct: 251 KSKCFGFVNFESTDDAARAVEALNGKKI 278
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F +
Sbjct: 114 PSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQ-SKGYGFVQFDTE 172
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ ++ NG + + +Q + + E D +FV +L+ TD L++
Sbjct: 173 EAAQKAIEKLNGMLL-NDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKK 231
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF + ++ A V+ D G+SK +GFV F + R++ +NG + +G A
Sbjct: 232 TF-GEFGTITSAVVMRD-GDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQ 289
Query: 246 TKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + QG N ++V LD S+ D+ LK +F YG +
Sbjct: 290 KKSEREHELKIKFEQSMKEAADKYQGAN------LYVKNLDDSIADEKLKELFSSYGTIT 343
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD-QA 356
K+ P G + GFV F+ A +AL +NG + + + ++ + ++++ QA
Sbjct: 344 SCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRARLQA 403
Query: 357 QWNGGGYYGFAQGYEAYGYAPPTQDPN--MYYGGFPGYG 393
Q FAQ PP+ P MY G PG G
Sbjct: 404 Q--------FAQMRPV--SMPPSVAPRMPMYPPGGPGMG 432
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 36/221 (16%)
Query: 74 RSLWIGDLQPWMEESYIASI-FGHTGEFVSGKVIR--NKQTNF------SEGYGFIEFVS 124
R+LW+GDL PW++E+ IA + + + V+ K+IR + +T+F GY F+EF +
Sbjct: 124 RTLWMGDLDPWLDETAIADLWYNVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDN 183
Query: 125 HAAAERVLQTFNGTQMPST---------------EQNFRLNWATYGAGERRQDDGPDFTI 169
A+ L + NG +P + ++ FRLNWA + P+F++
Sbjct: 184 LYDAQLAL-SLNGKPLPQSAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPIIHTPEFSL 242
Query: 170 FVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
FVGDL+A T+ L F+ Y SVK +V+TD +G+S+ +GFVRF DE + +++ E
Sbjct: 243 FVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVE 302
Query: 229 MNGVLCSTRPMRIGPAATK-KAATGQQYQKATYQNTQGSQG 268
M G R +R+ A+ K A TG NT GS G
Sbjct: 303 MQGTWFGGRQLRVALASAKTNAKTG---------NTNGSPG 334
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 121/283 (42%), Gaps = 27/283 (9%)
Query: 75 SLWIGDLQPWMEESYIASIF--GHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
SL++GDL E+++ + F + + +VI + + S +GF+ F A + L
Sbjct: 241 SLFVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKAL 300
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
GT + L A A + P F + + Q F+A
Sbjct: 301 VEMQGTWFGGRQLRVALASAKTNAKTGNTNGSPGFY-----------NVLPQHFFQA--- 346
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
G + G YG + +S Q +++ + L S R G + + +
Sbjct: 347 --PGGLPLATSPFGY---YGNSQLHPQS-QYPALSSSSEALNSVR--HHGHSVIPDSISS 398
Query: 253 QQYQKATYQNTQG---SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG 309
+ N G Q DP NTT+FVGGL V D L +F +G + VKIP G
Sbjct: 399 YNGTEGLSNNLYGIHHGQPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPG 458
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
K CGF++++ R AE A++ + G +GG +RLSWG+ +N +
Sbjct: 459 KNCGFIKYSKRQEAEDAIASMQGFIIGGNRVRLSWGKVSTNNK 501
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 21/239 (8%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTT-------GRSK-GYGFVRFGDE 219
T+++GDL + + + + + V K++ R+ G S GY FV F +
Sbjct: 125 TLWMGDLDPWLDETAIADLWYNVLKKRVNVKLIRPRSHKTDFPYHGVSHLGYCFVEFDNL 184
Query: 220 SEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN--TQGSQGENDPNNTTI 277
+ +++ +NG M ++ ++Y + + N T + + P ++
Sbjct: 185 YDAQLALS-LNGKPLPQSAMPSQKVRSRNQDNQKKYFRLNWANGATLDAPIIHTPE-FSL 242
Query: 278 FVGGLDPSVTDDILKTVF-GQYGELVHV------KIPAGKRC-GFVQFANRTCAEQALSV 329
FVG L S T+ L F +Y E V + RC GFV+F++ +AL
Sbjct: 243 FVGDLSASTTEAHLLAFFQNKYPESVKTVRVITDPVSGKSRCFGFVRFSDEHARSKALVE 302
Query: 330 LNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQG-YEAYGYAPPTQDPNMYYG 387
+ GT GG+ +R++ + +N ++ + G Y Q ++A G P P YYG
Sbjct: 303 MQGTWFGGRQLRVALASAKTNAKTGNTNGSPGFYNVLPQHFFQAPGGLPLATSPFGYYG 361
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 55/292 (18%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKN----------------------- 138
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
R+NWA ++D F IFVGDL+ +V D VL + F A S
Sbjct: 139 ------------EIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC-GS 185
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + ++ ++++ M+G +R +R A K +
Sbjct: 186 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 245
Query: 254 QYQKATYQN-------------TQGSQG-----ENDPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 246 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPL 305
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ LNG + G+ ++ SWG+
Sbjct: 306 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGK 357
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 12/229 (5%)
Query: 140 MPST--EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGA 197
+P T + + NW+ AG + D F IFVGDL++DV L+E F + +
Sbjct: 19 LPKTFLSREMKGNWSNSPAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTP-FGEISDC 77
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
+VV D T +SKGYGFV F + + ++ MNG R +R A + A+ Q+
Sbjct: 78 RVVRDPQTQKSKGYGFVSFLRKQDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQE 137
Query: 258 ATYQNT---------QGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
+ N+ + P N T++ GGL +++++++ F YG + +++
Sbjct: 138 GSQGNSTPKYTPLTFDEVYNQASPTNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFK 197
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQ 357
K FV+FA + A A+ ++ T + GQ ++ SWG+ S+ + Q Q
Sbjct: 198 DKGYAFVRFATKESATHAIVAVHNTDVNGQIVKCSWGKESSDPNNQQVQ 246
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 41/192 (21%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL +E + F GE +V+R+ QT S+GYGF+ F+ AE +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 136 NGTQMPSTEQNFRLNWATY--GAGERRQDDGP-----------------------DFTIF 170
NG + + R NWAT + Q +G + T++
Sbjct: 110 NGQWLGG--RVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVY 167
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM---- 226
G L +++ ++Q+TF + Y ++ +V D KGY FVRF + ++
Sbjct: 168 CGGLGQGLSEELIQKTFSS-YGIIQEIRVFKD------KGYAFVRFATKESATHAIVAVH 220
Query: 227 -TEMNG--VLCS 235
T++NG V CS
Sbjct: 221 NTDVNGQIVKCS 232
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 25/285 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ R+ G +F+ +L + + + +TF A + ++
Sbjct: 72 MNFDAIKN--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKTIDNKAMYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+V TD SKGYGFV F E ++++++NG+L + + + +G +K
Sbjct: 126 LSCRVATDEEAA-SKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPRK------ 178
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
+ G+ T +++ + DD L +F +YG++ K+ +GK
Sbjct: 179 -------EREKMLGDKARCFTNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTDDSGKN 231
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV F AE+A+ LNG +GG+ + + + + +QS+
Sbjct: 232 RGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQKKAERQSE 276
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + +++ + IF G+ S KV+ + + + G+GF+ F +AER ++
Sbjct: 193 NVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTD-DSGKNRGFGFVSFEEPDSAERAVEE 251
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG M E+ L + R + ++V +L + D L
Sbjct: 252 LNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLDDALDDERL 311
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + ++ AKV+TD GRSKG+GFV F E +++TEMNG + ++P+ +
Sbjct: 312 RKEF-GPFGNITSAKVMTD-ANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVAL 369
Query: 244 AATK---KAATGQQY 255
A K KA QY
Sbjct: 370 AQRKEDRKAHLASQY 384
>gi|344233034|gb|EGV64907.1| hypothetical protein CANTEDRAFT_130074 [Candida tenuis ATCC 10573]
Length = 428
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 22/292 (7%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
LW+GDL E I SI+ GE ++ K+IR+++ G FVS A +
Sbjct: 65 LWMGDLDSSWNEETIISIWNSLGEAPLNVKLIRDREDPTGRGKPLYCFVSFANEASIASA 124
Query: 135 F--NGTQMPSTEQNFRLNWATYGAG--------ERRQDDGP--DFTIFVGDLAADVTDYV 182
F NG+ +P T++ +LN+AT R + P DF++ + L D T+
Sbjct: 125 FSKNGSSVPGTDKRLKLNYATGSGSGSSSTITSNDRFNRKPQDDFSLMISGLELDTTEGQ 184
Query: 183 LQETFRAVY-SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
+ + F + Y +SV+ K++ D TTG S+G+GF +F + Q EMNG + + +P+ +
Sbjct: 185 VFDAFNSRYPNSVRQVKIIVDTTTGVSRGFGFAKFNSSATQQIVCKEMNGFILNGKPISL 244
Query: 242 GPAATKKAATGQQY--QKATYQNTQGSQGE------NDPNNTTIFVGGLDPSVTDDILKT 293
G + + Q Q Q + +DP NT I V GL T+ ++
Sbjct: 245 GSTVSGVNSRNQDVLSDSVDLNVIQLPQAQPKLSKYSDPENTCIEVSGLSARFTESEVEC 304
Query: 294 VFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG 345
F +G+++ + I +++ R AE A+ ++N + +R++WG
Sbjct: 305 YFLSFGDIISLTISKNFDSCSIRYRIREDAEAAILLMNSFTINDCQMRVTWG 356
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W RR +DG +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRG--RPCRIMWCLRDPASRRNNDG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD G+S GYGF+ F +++ +NG + RP+ +G +
Sbjct: 127 MSCKIATD-VEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG-----------K 174
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+QK + + E D T ++V + S T+D+L +FG YG++ + + + G+
Sbjct: 175 FQKKAERFS-----EKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQFANRTCAEQALSVLN 331
GFV F N A+ A++ L+
Sbjct: 230 FGFVNFENPDSAKAAVAALH 249
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL ADVT+ +L E F +V + V ++ D T RS GY +V + ++ R++
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSV-AVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N RP RI A S+ ND N +FV LD S+
Sbjct: 72 TLNFTCIRGRPCRIMWCLRDPA----------------SRRNNDGN---VFVKNLDKSID 112
Query: 288 DDILKTVFGQYGELVHVKIPA---GKRCG--FVQFANRTCAEQALSVLNGTQLGGQSI 340
+ L F +G ++ KI GK G F+ F + A++A+S LNG LG + I
Sbjct: 113 NKTLFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPI 170
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++V +LA + + L+ F + +V + TD + G S+G+GFV F E +++
Sbjct: 363 VNLYVKNLADSINEEDLRSMFEP-FGTVSSVSIKTDES-GVSRGFGFVSFLSPDEATKAI 420
Query: 227 TEMNGVLCSTRPMRIG 242
TEM+ L +P+ +G
Sbjct: 421 TEMHLKLVRGKPLYVG 436
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG+YG + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ K GFV F A++A+ +NG + G++I
Sbjct: 222 VMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAI 261
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GYGF+ F +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AAER + NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 EAAERAIDKMNGMLL----NDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD +G+SKG+GFV F + +++ +MNG + + +
Sbjct: 205 ERLKEMF-GKYGPALSVKVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIY 262
Query: 241 IGPA--ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
+G A ++ +++++ QG N ++V LD + D+ L+ F +
Sbjct: 263 VGRAKKVERQTELKRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDERLRKEFSPF 316
Query: 299 GELVHVKIPA----GKRCGFVQFA 318
G + K+ K GFV F+
Sbjct: 317 GTITSAKVMMEGGRSKGFGFVCFS 340
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL DVT+ +L E F + +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPA-GPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G IF+
Sbjct: 68 ALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVG-----------------------NIFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K GFV F + AE+A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 29/318 (9%)
Query: 45 VGWTPQPVPPPSQQTQPYG-VAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
G P P +P G AP S SL++G+L P + E+ + +F G+ S
Sbjct: 28 AGAAPSTEAAPETAGEPSGTAAPATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASI 87
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
+V R+ T S GY ++ + + A ER L+ N T + + R+ W+ R+
Sbjct: 88 RVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRKTGQ 145
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
G +F+ +L + + L +TF A + ++ KV D G SKGYGFV +
Sbjct: 146 G---NVFIKNLDTAIDNKALHDTF-AAFGNILSCKVAQDE-YGNSKGYGFVHYETAEAAT 200
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++ +NG+L + + + +G KK + Q E N T I+V ++
Sbjct: 201 NAIKHVNGMLLNEKKVFVGHHIAKK-------------DRQSKFEEMKANFTNIYVKNVE 247
Query: 284 PSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGG 337
VTD+ + +F +YGE+ + GFV F++ A A+ LN +L G
Sbjct: 248 QDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKG 307
Query: 338 QSIRLSWGRSPSNKQSDQ 355
Q +L GR+ + ++
Sbjct: 308 Q--KLYVGRAQKKHEREE 323
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
R G+SKG+GFV F + E +++TEMN + +P+ + A K Q +N
Sbjct: 436 RHLGKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLEASIQARN 495
Query: 263 T 263
T
Sbjct: 496 T 496
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 26/292 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVM 223
Query: 307 --PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
P GK GFV F A +A+ +NG + G+ + + + +Q++
Sbjct: 224 TDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F + Y KV+TD TG+SKG+GFV F + +++ EMNG + + +
Sbjct: 205 ERLKELF-SKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKVERQAELKRKFEQLKQERLSRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGAITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGAITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+P+ + A K KA QY Q G + P NT I
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY----MQRIAGMRAL--PANTII 398
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 64
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 120
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 121 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 180
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 181 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 240
Query: 313 GFVQ 316
FV+
Sbjct: 241 SFVR 244
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 2 EDEMPK-TLYVGNLSRDVTEALILQLFSQI-GPCKNCKMIMD--TAGNDPYCFVEFHEHR 57
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 58 HAAAALAAMNG----------------RKIMGKEV-KVNWATTPSSQKKDTSNHFHVFVG 100
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K F +G + ++ K GFV F N+ AE A+ + G
Sbjct: 101 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 160
Query: 335 LGGQSIRLSWG-RSP 348
LGG+ IR +W R P
Sbjct: 161 LGGRQIRTNWATRKP 175
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAEQALSVL 330
T++VG L VT+ ++ +F Q G + K+ AG C FV+F A AL+ +
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAAALAAM 66
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSDQA 356
NG ++ G+ ++++W +PS+++ D +
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTS 92
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W RR +DG +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRG--RPCRIMWCLRDPASRRNNDG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD G+S GYGF+ F +++ +NG + RP+ +G +
Sbjct: 127 MSCKIATD-VEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG-----------K 174
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+QK + + E D T ++V + S T+D+L +FG YG++ + + + G+
Sbjct: 175 FQKKAERFS-----EKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQFANRTCAEQALSVLN 331
GFV F N A+ A++ L+
Sbjct: 230 FGFVNFENPDSAKAAVAALH 249
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL ADVT+ +L E F +V + V ++ D T RS GY +V + ++ R++
Sbjct: 13 SLYVGDLDADVTETMLYEIFNSV-AVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N RP RI A S+ ND N +FV LD S+
Sbjct: 72 TLNFTCIRGRPCRIMWCLRDPA----------------SRRNNDGN---VFVKNLDKSID 112
Query: 288 DDILKTVFGQYGELVHVKIPA---GKRCG--FVQFANRTCAEQALSVLNGTQLGGQSI 340
+ L F +G ++ KI GK G F+ F + A++A+S LNG LG + I
Sbjct: 113 NKTLFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPI 170
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
++V +LA + + L+ F + +V + TD + G S+G+GFV F E +++
Sbjct: 363 VNLYVKNLADSINEEDLRSMFEP-FGTVSSVSIKTDES-GVSRGFGFVSFLSPDEATKAI 420
Query: 227 TEMNGVLCSTRPMRIG 242
TEM+ L +P+ +G
Sbjct: 421 TEMHLKLVRGKPLYVG 436
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
+S+ + SL++G+L P + ES + +F G+ + +V R+ + S GY ++ F SHA
Sbjct: 42 NSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADG 101
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
E+ L+ N T P + R+ W+ RR G IF+ +L + + L +TF
Sbjct: 102 EKALEELNYT--PIKGKACRIMWSQRDPSLRRNGSG---NIFIKNLHPAIDNKTLHDTFS 156
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE-MNGVLCSTRPMRIGPAATK 247
A + + K+ TD G SKG+GFV + +ESE ++ E +NG+L + + +GP K
Sbjct: 157 A-FGKILSCKIATDE-NGNSKGFGFVHY-EESESAKAAIENVNGMLLNDHEVYVGPHLAK 213
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHV--- 304
K + Q E N T ++V ++ + +D L+ F +G + +
Sbjct: 214 K-------------DRQSKMRELIANFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLS 260
Query: 305 KIPAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
K +GK GFV F A +A+ LN + GQ + + + S +
Sbjct: 261 KDESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSER 309
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 144/301 (47%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P +G +++I +L P ++ + F G+ +S K+ ++ N S+G+GF+ +
Sbjct: 127 PSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFGKILSCKIATDENGN-SKGFGFVHYEES 185
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+A+ ++ NG + E + A + ++ +FT ++V ++ + + L+
Sbjct: 186 ESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSKMRELIANFTNVYVKNINLNWDEDKLR 245
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
ETF + + ++ + D + G+S+G+GFV F + ++++ E+N + + +G A
Sbjct: 246 ETF-SPFGTISSIFLSKDES-GKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRA 303
Query: 245 ATKKA---ATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + QY+ A + QG N +FV LD S+ D L+ F YG +
Sbjct: 304 QKKSERMESLKHQYEAARQEQLNKYQGYN------LFVKNLDDSIDDAKLEEEFKPYGTI 357
Query: 302 VHVKI---PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
K+ AGK GFV +++ A +A++ ++ + G+ + ++ + ++S +
Sbjct: 358 TSAKVMLDDAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVALAQRKEVRRSQLS 417
Query: 357 Q 357
Q
Sbjct: 418 Q 418
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ +E + F G +S + ++ S G+GF+ F H A + ++
Sbjct: 229 NVYVKNINLNWDEDKLRETFSPFGT-ISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G +E+ L A + + + + +FV +L + D L
Sbjct: 288 LNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKL 347
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F+ Y ++ AKV+ D G+SKG+GFV + E +++TEM+ + + +P+ +
Sbjct: 348 EEEFKP-YGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVAL 405
Query: 244 AATKKAATGQQYQKATYQN 262
A K+ Q Q+ +N
Sbjct: 406 AQRKEVRRSQLSQQIQARN 424
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
S E+N + + + A + + +T ++TQ S+ +++VG LDP
Sbjct: 2 SSAEINQITEQAEKLSVADPAAAETPATTAEESSTAESTQNSE-----TLASLYVGELDP 56
Query: 285 SVTDDILKTVFGQYGELVHVKI---PAGKRC---GFVQFANRTCAEQALSVLNGTQLGGQ 338
SVT+ L VF G++ +++ K+ +V F + E+AL LN T + G+
Sbjct: 57 SVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALEELNYTPIKGK 116
Query: 339 SIRLSWG-RSPSNKQS 353
+ R+ W R PS +++
Sbjct: 117 ACRIMWSQRDPSLRRN 132
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 30/284 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++GDL + E ++ +FG G S +V R+ T+ S YG++ ++S A A L+
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + ++ R+ W+ RR G +FV +L V + LQE F + +
Sbjct: 99 LNHSLI--LDKPIRVMWSNRDPDARRSGVG---NVFVKNLNDLVDNVSLQELF-CKFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV-LCSTRPMRIGPAATKKAATGQ 253
KV + G S+GYGFV+F + S+ +N C G+
Sbjct: 153 LSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFC-----------------GR 194
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----A 308
Q AT+ ND T +++ LD +T++++K F QYG ++ VKI
Sbjct: 195 QLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGT 254
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
K GFV F N A++A +NG LG +++ ++ + + ++
Sbjct: 255 SKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERK 298
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 160/341 (46%), Gaps = 22/341 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + +F G+ +S KV +N+ S GYGF++F
Sbjct: 118 PDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGT-SRGYGFVQFALQ 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ +Q N + + L+ AT+ ER ++ +T +++ +L D+T+ ++
Sbjct: 177 ESADASIQNLNNSHFCGRQ----LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELI 232
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + Y V K++ R G SKG+GFV F + R+ MNG+L ++ + +
Sbjct: 233 KLKF-SQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVAR 290
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K A +QY + ++ + ++ N + +++ ++ V DD L+ F ++G +
Sbjct: 291 A--QKKAERKQYLQRLHEEKR-NEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITS 347
Query: 304 VKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
KI ++ GFV + A+ A+S + G G+ + ++ + +++ Q
Sbjct: 348 AKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQR 407
Query: 359 NGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPG 399
+ A A PT P Y+ P Q PG
Sbjct: 408 ----FAELATMVGATSPVIPTGYPQFYF-AHPSTHLPQSPG 443
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 33/304 (10%)
Query: 55 PSQQTQPYGVAPDASSDGIR------SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN 108
P P P+A+ D SL++G+L P + E+ + +F G+ S +V R+
Sbjct: 20 PEANGAPVEATPEAAGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRD 79
Query: 109 KQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT 168
T S GY ++ + + A ER L+ N T + + R+ W+ R+ G
Sbjct: 80 AVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRKTGQG---N 134
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
+F+ +L + + L +TF A + ++ KV D SKGYGFV + ++
Sbjct: 135 VFIKNLDNAIDNKALHDTF-AAFGNILSCKVAQDEFA-NSKGYGFVHYETAEAANNAIKH 192
Query: 229 MNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTD 288
+NG+L + + + +G +KK + Q E N T I++ +D +TD
Sbjct: 193 VNGMLLNDKKVFVGHHISKK-------------DRQSKFEEMKANFTNIYIKNIDLEITD 239
Query: 289 DILKTVFGQYGE-----LVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
D +T+F +GE L H + + GFV +AN AE A++ +N ++ Q +L
Sbjct: 240 DEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVAEMNEKEVKSQ--KLY 297
Query: 344 WGRS 347
GR+
Sbjct: 298 VGRA 301
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 198 KVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
K + G+SKG+GFV F E +++TEMN + + +P+ + A K Q
Sbjct: 416 KKTEKKAFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEAS 475
Query: 258 ATYQNT 263
+NT
Sbjct: 476 IQARNT 481
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
++L++G+L + E+ I +F G + K+I + N + Y F+EF H A L
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGN--DPYCFVEFHEHRHAAAALA 72
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
NG ++ E ++NWAT + +++ D F +FVGDL+ ++T ++ F A +
Sbjct: 73 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAF-APFGR 128
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ A+VV D TG+SKGYGFV F ++ + ++ +M G R +R A K A
Sbjct: 129 ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS 188
Query: 254 QYQKATYQNTQGS-QGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC 312
Y+ T Q + ++ PNN T++ GG+ +T+ +++ F +G+++ +++ K
Sbjct: 189 TYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY 248
Query: 313 GFVQ 316
FV+
Sbjct: 249 SFVR 252
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 161 QDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDES 220
+D+ P T++VG+L+ DVT+ ++ + F + K K++ D T + Y FV F +
Sbjct: 10 EDEMPK-TLYVGNLSRDVTEALILQLFSQI-GPCKNCKMIMD--TAGNDPYCFVEFHEHR 65
Query: 221 EQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MNG + G++ K + T SQ ++ N+ +FVG
Sbjct: 66 HAAAALAAMNG----------------RKIMGKEV-KVNWATTPSSQKKDTSNHFHVFVG 108
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA------GKRCGFVQFANRTCAEQALSVLNGTQ 334
L P +T + +K F +G + ++ K GFV F N+ AE A+ + G
Sbjct: 109 DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW 168
Query: 335 LGGQSIRLSWG-RSP 348
LGG+ IR +W R P
Sbjct: 169 LGGRQIRTNWATRKP 183
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR--CGFVQFANRTCAEQALSVL 330
T++VG L VT+ ++ +F Q G + K+ AG C FV+F A AL+ +
Sbjct: 16 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAAALAAM 74
Query: 331 NGTQLGGQSIRLSWGRSPSNKQSDQA 356
NG ++ G+ ++++W +PS+++ D +
Sbjct: 75 NGRKIMGKEVKVNWATTPSSQKKDTS 100
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 105 LNYA--PIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 159 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 210
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 211 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 264
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F + A A+ +NG LG + + + S+++ +
Sbjct: 265 RSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 309
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F
Sbjct: 124 PSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKE 182
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------PDFT-IFVGDLAAD 177
A+ + NG + + +Q F G RRQD P FT ++V +L +
Sbjct: 183 ETAQAAIDKLNGMLL-NDKQVF------VGHFVRRQDRARSESGAVPSFTNVYVKNLPKE 235
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+TD L++TF Y + A V+ D++ G S+ +GFV F ++ +MNG+
Sbjct: 236 ITDDELKKTF-GKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVEKMNGISLGED 293
Query: 238 PMRIGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
+ +G A + ++ +++++ + QG N +++ LD SV D+ LK +
Sbjct: 294 VLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN------LYLKNLDDSVNDEKLKEM 347
Query: 295 FGQYGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
F +YG + K+ + GFV ++N A A+ +NG +G + + ++ +
Sbjct: 348 FSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKE 407
Query: 350 NKQS 353
+Q+
Sbjct: 408 ERQA 411
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 30/284 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++GDL + E ++ +FG G S +V R+ T+ S YG++ ++S A A L+
Sbjct: 39 ALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEK 98
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + ++ R+ W+ RR G +FV +L V + LQE F + +
Sbjct: 99 LNHSLI--LDKPIRVMWSNRDPDARRSGVG---NVFVKNLNDLVDNVSLQELF-CKFGDI 152
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV-LCSTRPMRIGPAATKKAATGQ 253
KV + G S+GYGFV+F + S+ +N C G+
Sbjct: 153 LSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFC-----------------GR 194
Query: 254 QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----A 308
Q AT+ ND T +++ LD +T++++K F QYG ++ VKI
Sbjct: 195 QLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGT 254
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
K GFV F N A++A +NG LG +++ ++ + + ++
Sbjct: 255 SKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQKKAERK 298
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 160/341 (46%), Gaps = 22/341 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
PDA G+ ++++ +L ++ + +F G+ +S KV +N+ S GYGF++F
Sbjct: 118 PDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGT-SRGYGFVQFALQ 176
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATY-GAGERRQDDGPDFT-IFVGDLAADVTDYVL 183
+A+ +Q N + + L+ AT+ ER ++ +T +++ +L D+T+ ++
Sbjct: 177 ESADASIQNLNNSHFCGRQ----LHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEELI 232
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + Y V K++ R G SKG+GFV F + R+ MNG+L ++ + +
Sbjct: 233 KLKF-SQYGLVISVKIMK-RDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVAR 290
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
A +K A +QY + ++ + ++ N + +++ ++ V DD L+ F ++G +
Sbjct: 291 A--QKKAERKQYLQCLHEEKR-NEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITS 347
Query: 304 VKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
KI ++ GFV + A+ A+S + G G+ + ++ + +++ Q
Sbjct: 348 AKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQR 407
Query: 359 NGGGYYGFAQGYEAYGYAPPTQDPNMYYGGFPGYGTYQQPG 399
+ A A PT P Y+ P Q PG
Sbjct: 408 ----FAELATMVGATSPVIPTGYPQFYF-AHPSTHLPQSPG 443
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 27/264 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF G S +V R+ T S GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + Q RL W+ R+ G IFV +L + + L +TF +++ ++
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGTG---NIFVKNLDKSIDNKALFDTF-SMFGNI 130
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SK YGFV + DE ++ ++NGV ++ + +GP K
Sbjct: 131 LSCKVATDE-FGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKS------ 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKR 311
++AT ND T ++V SVT+ L+ +F YGE+ + + ++
Sbjct: 184 -ERAT----------NDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSMIVKMDNKNRK 232
Query: 312 CGFVQFANRTCAEQALSVLNGTQL 335
F+ +A+ A+ A+ LNG ++
Sbjct: 233 FCFINYADAESAKNAMDNLNGKKI 256
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 33/182 (18%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL DVT+ VL E F V V +V D T +S GY +V + + ++ R++
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTV-GHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 228 EMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
+N +P R+ + +K+ TG IFV LD
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGTG-----------------------NIFVKNLD 112
Query: 284 PSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQ 338
S+ + L F +G ++ K+ K GFV + + A++A+ +NG QLG +
Sbjct: 113 KSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSK 172
Query: 339 SI 340
++
Sbjct: 173 NV 174
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----KRCG--FVQFANRTCAEQALSV 329
+++VG L+ VT+ +L +F G + +++ K G +V + N AE+AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 330 LNGTQLGGQSIRLSWG-RSPSNKQS 353
LN T + GQ RL W R PS ++S
Sbjct: 77 LNYTNIKGQPARLMWSHRDPSLRKS 101
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L + D +L+E F + ++ AKV+ D +SKG+GFV F + E +++T
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEP-FGTITSAKVMRDEKE-QSKGFGFVCFASQEEANKAVT 508
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EM+ + + +P+ +G A ++
Sbjct: 509 EMHLKIINGKPLYVGLAEKRE 529
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 60 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 118
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 119 LNYA--PIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 172
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 173 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 224
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 225 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 278
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F + A A+ +NG LG + + + S+++ +
Sbjct: 279 RSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 323
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F
Sbjct: 138 PSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKE 196
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------PDFT-IFVGDLAAD 177
A+ + NG + + +Q F G RRQD P FT ++V +L +
Sbjct: 197 ETAQAAIDKLNGMLL-NDKQVF------VGHFVRRQDRARSESGAVPSFTNVYVKNLPKE 249
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+TD L++TF Y + A V+ D++ G S+ +GFV F ++ +MNG+
Sbjct: 250 ITDDELKKTF-GKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVEKMNGISLGED 307
Query: 238 PMRIGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
+ +G A + ++ +++++ + QG N +++ LD SV D+ LK +
Sbjct: 308 VLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN------LYLKNLDDSVNDEKLKEM 361
Query: 295 FGQYGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
F +YG + K+ + GFV ++N A A+ +NG +G + + ++ +
Sbjct: 362 FSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKE 421
Query: 350 NKQS 353
+Q+
Sbjct: 422 ERQA 425
>gi|241998018|ref|XP_002433652.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
gi|215495411|gb|EEC05052.1| tRNA selenocysteine associated protein, putative [Ixodes
scapularis]
Length = 181
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 17/187 (9%)
Query: 81 LQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQ 139
L+P M+E ++ F GE V K+IRN+ T GYGF++F AA+R L NG
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNGRP 60
Query: 140 MPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKV 199
+P+ Q + +F++FVGDL+++V D L F Y SVK AKV
Sbjct: 61 IPNATQGVSPSLLPR-----------EFSMFVGDLSSEVDDVHLYHAFSQRYPSVKAAKV 109
Query: 200 VTDRTTGRSKGYGFVRFGDESEQLRSMTEM-NGVLCSTRPMRIGPAATKKAATGQ---QY 255
V D+ +G SKG+GFVRF DESE ++ +M + +L ++P+R+G A ++ A G+
Sbjct: 110 VLDQ-SGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRVGVANPRRVADGRVGGDG 168
Query: 256 QKATYQN 262
Q+ Y+N
Sbjct: 169 QRVFYRN 175
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 174 LAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL 233
L + +Y +Q+ F + + K++ +R TG +GYGF+ FGDE R++ NG
Sbjct: 1 LEPTMDEYFVQQAFTMMGENPVHVKIIRNRITGMPRGYGFLDFGDEEAAQRALLRCNG-- 58
Query: 234 CSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKT 293
RP+ P A TQG P ++FVG L V D L
Sbjct: 59 ---RPI---PNA-----------------TQGVSPSLLPREFSMFVGDLSSEVDDVHLYH 95
Query: 294 VFGQ-YGELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQL-GGQSIRL 342
F Q Y + K+ K GFV+F++ + ++AL + + L G + IR+
Sbjct: 96 AFSQRYPSVKAAKVVLDQSGLSKGFGFVRFSDESEYQEALVDMQHSLLVGSKPIRV 151
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 26/272 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G S +V R+ T S GY ++ + + A E+ L+
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 122 LNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNLDVAIDNKALHDTF-AAFGNI 175
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + + +++ +NG+L + + + +G KK
Sbjct: 176 LSCKVAQDE-NGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKK------ 228
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC-- 312
+ Q E N T I+V ++P VTDD +T+F +YG++ + +
Sbjct: 229 -------DRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGK 281
Query: 313 ----GFVQFANRTCAEQALSVLNGTQLGGQSI 340
GFV F + A +A+ LN + GQ++
Sbjct: 282 SRGFGFVNFTSHEDASKAVQELNEKEFHGQNL 313
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 94/245 (38%), Gaps = 58/245 (23%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + ++F G+ S + R+++T S G+GF+ F SH A + +Q
Sbjct: 243 NIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQE 302
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L + A + + +++ +L +V D L
Sbjct: 303 LNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKL 362
Query: 184 QETFRAVYSSVKGAKVVTDRTT-------------------------------------- 205
++ F + + + AKV+ D T
Sbjct: 363 RQLF-SEFGPITSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGE 421
Query: 206 --------GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQK 257
G+SKG+GFV F + + +++ EMN + + +P+ + A K Q Q
Sbjct: 422 DSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQLEQS 481
Query: 258 ATYQN 262
+N
Sbjct: 482 IQARN 486
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRC---GFVQFANRTCAEQAL 327
+ +++VG LDPSVT+ +L +F Q G + +++ +R +V + E+AL
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 328 SVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
LN T + G+ R+ W R P+ +++ Q
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGQ 148
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + ES++ +F + +V R+ T+ S GY ++ F + A R +++
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMES 104
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P ++ R+ + R G +F+ +L A + + L ETF + + ++
Sbjct: 105 LNYA--PIRDRPIRIMLSNRDPSTRLSGKG---NVFIKNLDASIDNKALYETFSS-FGTI 158
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D GRSKGYGFV+F E ++ ++NG+L + + + +G +
Sbjct: 159 LSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRR------- 210
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL---VHVKIPAG-- 309
Q+ S+ P+ T ++V L +TDD LK FG+YG++ V +K +G
Sbjct: 211 ------QDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNS 264
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F + A A+ +NG LG + + + S+++ +
Sbjct: 265 RSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 309
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF++F
Sbjct: 124 PSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKE 182
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDG-------PDFT-IFVGDLAAD 177
A+ + NG + + +Q F G RRQD P FT ++V +L +
Sbjct: 183 ETAQAAIDKLNGMLL-NDKQVF------VGHFVRRQDRARSESGAVPSFTNVYVKNLPKE 235
Query: 178 VTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR 237
+TD L++TF Y + A V+ D++ G S+ +GFV F ++ +MNG+
Sbjct: 236 ITDDELKKTF-GKYGDISSAVVMKDQS-GNSRSFGFVNFVSPEAAAVAVEKMNGISLGED 293
Query: 238 PMRIGPA---ATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTV 294
+ +G A + ++ +++++ + QG N +++ LD SV D+ LK +
Sbjct: 294 VLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSN------LYLKNLDDSVNDEKLKEM 347
Query: 295 FGQYGELVHVKIPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
F +YG + K+ + GFV ++N A A+ +NG +G + + ++ +
Sbjct: 348 FSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKE 407
Query: 350 NKQS 353
+Q+
Sbjct: 408 ERQA 411
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + DD LK +F +YG + ++
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIR 221
Query: 306 IPAGKR-----CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ + GFV F A++A+ +NG ++ G+ I + + +Q++
Sbjct: 222 VMTDENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTE 275
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + IF G +S +V+ ++ S G+GF+ F H
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGK-SRGFGFVSFERHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A+R + NG +M E+ L + R ++V +L
Sbjct: 244 AQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + ++ AKV+ D GRSKG+GFV F E +++TEMNG + +T
Sbjct: 304 GIDDERLRKEF-SPFGTITSAKVMMD--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 360
Query: 237 RPMRIGPAATKK 248
+P+ + A K+
Sbjct: 361 KPLYVALAQRKE 372
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + E+ + F G +S +V R+ T S GY +I F A AER L
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + + R+ W+ G R+ G +F+ +L + + L +TF A +
Sbjct: 70 DTMNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNLDDSIDNKALYDTFSA-FG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KVV D S+GYGFV F R++ MNG+L + R + +G ++K
Sbjct: 124 NILSCKVVCDENG--SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRK---- 177
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---- 308
+ G T +++ + DD L+ +F ++G+ + VK+
Sbjct: 178 ---------EREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNG 228
Query: 309 -GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A++ +NG ++ G+ + + + +QS+
Sbjct: 229 RSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKRLERQSE 275
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + IF G+ +S KV+ + S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGR-SKGFGFVNFEKHEEAQKAVAD 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R + ++V +L + D L
Sbjct: 251 MNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + Y ++ AKV+T+ GRSKG+GFV F E +++TEMNG + ST+P+ +
Sbjct: 311 RKEF-SPYGTITSAKVMTE--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVAL 367
Query: 244 AATK---KAATGQQY 255
A K KA QY
Sbjct: 368 AQRKEERKAILTNQY 382
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 134/268 (50%), Gaps = 27/268 (10%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL + +S + +F G+ VS +V R+ + S GYG++ + + A R L
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
+ N T P + R+ ++ RR +G IF+ +L + L +TF A +
Sbjct: 86 EVLNFT--PLHGKPIRIMYSNRDPTIRRSGNG---NIFIKNLDKAIDHKALHDTFSA-FG 139
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KV D ++G+SKGYGFV++ + +++ ++NG+L + + + +GP K
Sbjct: 140 NILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRK----- 193
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGK-- 310
Q + T+ T +FV L S ++ L+ +FG++G + V + +
Sbjct: 194 -QERDMAVDKTR---------FTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDG 243
Query: 311 --RC-GFVQFANRTCAEQALSVLNGTQL 335
RC GFV F N A +A+ LNG +L
Sbjct: 244 KSRCFGFVNFENAEDAARAVEALNGYKL 271
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 25/306 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S+GYGF+++ S
Sbjct: 107 PTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQ-SKGYGFVQYDSD 165
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
AA++ ++ NG + N + + ++ +D D T F ++++ L+E
Sbjct: 166 EAAQKAIEKLNGMLL-----NDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEE 220
Query: 186 TFRAVYS---SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 242
R ++ ++ V+ D G+S+ +GFV F + + R++ +NG + +G
Sbjct: 221 ELRKIFGEFGTITSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVG 279
Query: 243 PAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
A K + +++++ + SQG N +++ LD S++DD LK +F YG
Sbjct: 280 RAQKKSEREMELKHRFEQSAQEAVDKSQGLN------LYLKNLDDSISDDKLKELFSPYG 333
Query: 300 ELVHVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ K+ P+G K GFV F+ A +ALS +NG + + + ++ R +
Sbjct: 334 TITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMVVSKPLYVALAQRKEERRAR 393
Query: 354 DQAQWN 359
QAQ++
Sbjct: 394 LQAQFS 399
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 268 GENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRT 321
G N+ T+++VG LD +VTD L +F Q G++V V++ +R G+V + N
Sbjct: 20 GVNNQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQ 79
Query: 322 CAEQALSVLNGTQLGGQSIRLSW-GRSPSNKQS 353
A +AL VLN T L G+ IR+ + R P+ ++S
Sbjct: 80 DAARALEVLNFTPLHGKPIRIMYSNRDPTIRRS 112
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 33/240 (13%)
Query: 54 PPSQQTQPYGVAP--DASSDGI----RSLWIGDLQPWMEESYIASIF---------GHTG 98
PP TQ VA D+ S GI R+LW+GDL W++E I ++
Sbjct: 80 PPISTTQSNAVAAEQDSISGGISEQPRTLWMGDLDSWLDEKQITDLWWNLLKKKVVVKII 139
Query: 99 EFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPST--------------- 143
+ + K+ Q + GY F+EF + A++ L + NG +P
Sbjct: 140 KPKTLKLDPQFQGLTNSGYCFVEFETFEDAQQAL-SLNGQLLPDIAMPSQQVYPNNPDNQ 198
Query: 144 EQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY-SSVKGAKVVTD 202
++ FRLNWA+ P++++FVGDL+A T+ L F+ + +S+K +V+TD
Sbjct: 199 KKYFRLNWASGATLSAPIVQMPEYSLFVGDLSASTTEAHLLAFFQKKFPNSIKTVRVMTD 258
Query: 203 RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
+G+S+ +GFVRF +ESE+ R++ EMNGV + RP+R+ AT ++ +++ K+ N
Sbjct: 259 PVSGKSRCFGFVRFTEESERQRALNEMNGVWFAGRPLRVA-LATPRSTNYRKFGKSNNNN 317
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%)
Query: 256 QKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFV 315
Q+A+ Q S +DPNNTT+FVGGL VT+ L T+F +G + +KIP GK CGFV
Sbjct: 407 QQASLQPPISSPQYSDPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFV 466
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 352
+++ R AE+ + + G +GG +RLSWGR N +
Sbjct: 467 KYSTREEAERTIGAMQGFIIGGNRVRLSWGRVSMNNK 503
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 55/292 (18%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
R+L++G L P + E + IF TG S K+I +K
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKN----------------------- 136
Query: 134 TFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSS 193
R+NWA ++D F IFVGDL+ +V D VL + F A + S
Sbjct: 137 ------------EIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA-FGS 183
Query: 194 VKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
V A+V+ D TGRS+GYGFV F + S+ ++++ M+G +R +R A K +
Sbjct: 184 VSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 243
Query: 254 QYQKATYQN-------------TQGSQGEN-----DPN-NTTIFVGGLDPSVTDDILKTV 294
Q Q T G Q + P TT +VG L P T + L +
Sbjct: 244 QQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPL 303
Query: 295 FGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
F +G +V + A + FV+ A A+ L+G + G+ ++ SWG+
Sbjct: 304 FQNFGYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGK 355
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 31/301 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ ++++ ER L
Sbjct: 75 SLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQ 134
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N +Q+ + R+ W+ G R+ G IF+ +L + + L +TF A + +V
Sbjct: 135 LNYSQIRG--KPCRIMWSQRDPGLRKTGQG---NIFIKNLDQGIDNKALHDTF-AAFGTV 188
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD +G SKGYGFV + ++ +NG+L + + + +G
Sbjct: 189 LSCKVATD-DSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVG------------ 235
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
Q + + Q E + T ++V LD V ++ + +F Q+G + I
Sbjct: 236 -QHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNS 294
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSN------KQSDQAQWNGGGY 363
K GFV F N A++A+ L+ ++ G+ + + + S KQ +QA++ G
Sbjct: 295 KGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGK 354
Query: 364 Y 364
Y
Sbjct: 355 Y 355
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L++ +L + E +F G S + ++++ N S+G+GF+ F +H A+R ++
Sbjct: 256 NLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGN-SKGFGFVNFENHEDAQRAVEE 314
Query: 135 FNGTQM-------------PSTEQNFRLNW--ATYGAGERRQDDGPDFTIFVGDLAADVT 179
+ ++ E+ R + A Y + Q +++ +L DV
Sbjct: 315 LDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGS----NLYIKNLEDDVD 370
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
D L+ F + ++ KV+ D G SKG+GFV F E R+M+EMN + T+P+
Sbjct: 371 DEKLRAEFEP-FGTITSCKVMRDEK-GTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPL 428
Query: 240 RIGPAATKKAATGQQYQKATYQNTQ 264
+ A K Q + +N Q
Sbjct: 429 YVALAQRKDVRKQQLESQIAQRNNQ 453
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 275 TTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKRC---GFVQFANRTCAEQALS 328
+++VG LDP VT+ +L +F G + V++ +R +V + N E+AL
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALD 133
Query: 329 VLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
LN +Q+ G+ R+ W R P +++ Q
Sbjct: 134 QLNYSQIRGKPCRIMWSQRDPGLRKTGQ 161
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 26/292 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
ASS + SL++GDL + E+ + F G +S +V R+ T S GY ++ F A
Sbjct: 5 ASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPAD 64
Query: 128 AERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETF 187
AER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 65 AERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTF 119
Query: 188 RAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATK 247
A + ++ KVV D SKGY FV F + +++ +MNG+L + R + +G ++
Sbjct: 120 SA-FGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSR 176
Query: 248 KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI- 306
K + G T +++ V D+ LK +F Q+G+ + VK+
Sbjct: 177 K-------------EREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVM 223
Query: 307 --PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
P+GK GFV + A +A+ +NG ++GG+ I + + +Q++
Sbjct: 224 RDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAE 275
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 146/300 (48%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA++ ++ NG + + ++ + + + R+ + +FT +++ + +V D
Sbjct: 149 EAADKAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L++ F + + KV+ D +G+SKG+GFV + + +++ EMNG + +
Sbjct: 205 ESLKDLF-SQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKVERQAELKRKFEQLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + +++ + +F G+ +S KV+R+ + S+G+GF+ + H
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG ++ E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A AER L T
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGY FV F + R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI---PAGKR 311
KA T +++ + D+ LK +F +YG+ + VK+ +GK
Sbjct: 184 GAKAK-------------EFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKS 230
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV F A +A+ +NGT+L G+++ + + +Q++
Sbjct: 231 RGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAE 275
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 147/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + ++ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMED 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F Y KV+TD ++G+S+G+GFV F + +++ E+NG + + +
Sbjct: 205 EQLKEMFEK-YGKTLSVKVMTD-SSGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A ++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKMERQAELKRKFELLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + ME+ + +F G+ +S KV+ + + S G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTD-SSGKSRGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NGT++ E+ L + R +++ +L
Sbjct: 244 ANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQY 255
+P+ + A K KA QY
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY 382
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL D+T+ +L E F V +V D T RS GY +V F ++ R
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPA-GPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRI----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVG 280
++ MN + +P+RI + +K+ G +F+
Sbjct: 68 ALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVG-----------------------NVFIK 104
Query: 281 GLDPSVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLG 336
LD S+ + L F +G ++ K+ K FV F + A++A+ +NG L
Sbjct: 105 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLN 164
Query: 337 GQSIRLSWGRSPSNKQSD 354
+ + + GR S K+ +
Sbjct: 165 DRKVFV--GRFKSRKERE 180
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + ES + +F G +S +V R+ T S GY +I F A AER L
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + Q R+ W+ G R+ G IF+ +L + + L +TF + +
Sbjct: 70 DTMNFEVIKG--QPIRIMWSHRDPGLRKSGMG---NIFIKNLENSIDNKALYDTF-STFG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ +KVV + S+G+GFV F +++ MNG+L + R + +G ++
Sbjct: 124 SILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSR----- 176
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---- 308
Q + G T I+V L +V + L+ +F Q+G + VK+
Sbjct: 177 --------QKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG 228
Query: 309 -GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F A++A+ +NG ++ GQ + + + + +QS+
Sbjct: 229 QSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSE 275
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + G ++++ +L ++E + +F G S KV+R+ S G+GF+ F H
Sbjct: 185 ARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ-SRGFGFVNFEKHEE 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + RQ+ ++V +L
Sbjct: 244 AQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L+E F + Y + AKV+T+ + SKG+GFV F E +++TEMNG + T
Sbjct: 304 SINDERLKEVF-STYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 237 RPMRIGPAATK---KAATGQQYQK 257
+P+ + A K KA QY++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYRR 384
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + ES + +F G +S +V R+ T S GY +I F A AER L
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + Q R+ W+ G R+ G IF+ +L + + L +TF + +
Sbjct: 70 DTMNFEVIKG--QPIRIMWSHRDPGLRKSGMG---NIFIKNLENSIDNKALYDTF-STFG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ +KVV + S+G+GFV F +++ MNG+L + R + +G ++
Sbjct: 124 SILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSR----- 176
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---- 308
Q + G T I+V L +V + L+ +F Q+G + VK+
Sbjct: 177 --------QKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG 228
Query: 309 -GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F A++A+ +NG ++ GQ + + + + +QS+
Sbjct: 229 QSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSE 275
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + G ++++ +L ++E + +F G S KV+R+ S G+GF+ F H
Sbjct: 185 ARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ-SRGFGFVNFEKHEE 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + RQ+ ++V +L
Sbjct: 244 AQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L+E F + Y + AKV+T+ + SKG+GFV F E +++TEMNG + T
Sbjct: 304 SINDERLKEVF-STYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 237 RPMRIGPAATK---KAATGQQYQK 257
+P+ + A K KA QY++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYRR 384
>gi|221481353|gb|EEE19747.1| DNA/RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221502075|gb|EEE27821.1| DNA/RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 648
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 59/317 (18%)
Query: 74 RSLWIGDLQPW---MEESYIAS-IFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAA 128
R+LW+GDL ++E+Y+ + +F F++ +V R++ T +GF+EF + A
Sbjct: 64 RTLWMGDLDRAELPVDEAYVRNDMFLEFNAFITHVRVCRDRITRLP-SFGFVEFATEKHA 122
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATY-------------------------------GAG 157
+L+ NG +P ++LNWA + AG
Sbjct: 123 SYILEHMNGRFVPGRCHKYKLNWANFNLTEKPETRATFSRPPELSRNSGETASRSSNAAG 182
Query: 158 ERRQDDG---------PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
R D PD T I++G L + ++E F Y++V K++TD TG
Sbjct: 183 RRISDSSCRQSQGSPPPDSTSIWIGSLDPATSREEIEELFDQHYNTVCFVKLITDPNTGT 242
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQ 267
+G+GFV F D E R++ EMNG +C R +R A K A Q Y + T+ +
Sbjct: 243 GRGFGFVHFRDPDEADRALAEMNGAICRGRRIR----AQKIA---QDYCGG-FVPTKRKR 294
Query: 268 GENDPNNTT-IFVGGLDPSVTDDILKTVFGQYGELVHVK-IPAGKRCGFVQFANRTCAEQ 325
G T + V GLDP T++ ++ +GE++ K +P GK +V FA + AE
Sbjct: 295 GVLAGGATAKVVVRGLDPVCTEEEVERHLSHFGEIIQTKTVPGGK--AYVTFAEQQAAEN 352
Query: 326 ALSVLNGTQLGGQSIRL 342
A++ L+G +G + L
Sbjct: 353 AVTYLSGCFIGANRVGL 369
>gi|237838911|ref|XP_002368753.1| DNA/RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211966417|gb|EEB01613.1| DNA/RNA binding protein, putative [Toxoplasma gondii ME49]
Length = 648
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 59/317 (18%)
Query: 74 RSLWIGDLQPW---MEESYIAS-IFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAA 128
R+LW+GDL ++E+Y+ + +F F++ +V R++ T +GF+EF + A
Sbjct: 64 RTLWMGDLDRAELPVDEAYVRNDMFLEFNAFITHVRVCRDRITRLP-SFGFVEFATEKHA 122
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATY-------------------------------GAG 157
+L+ NG +P ++LNWA + AG
Sbjct: 123 SYILEHMNGRFVPGRCHKYKLNWANFNLTEKPETRATFSRPPELSRNSGETASRSSNAAG 182
Query: 158 ERRQDDG---------PDFT-IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGR 207
R D PD T I++G L + ++E F Y++V K++TD TG
Sbjct: 183 RRISDSSCRQSQGSPPPDSTSIWIGSLDPATSREEIEELFDQHYNTVCFVKLITDPNTGT 242
Query: 208 SKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQ 267
+G+GFV F D E R++ EMNG +C R +R A K A Q Y + T+ +
Sbjct: 243 GRGFGFVHFRDPDEADRALAEMNGAICRGRRIR----AQKIA---QDYCGG-FVPTKRKR 294
Query: 268 GENDPNNTT-IFVGGLDPSVTDDILKTVFGQYGELVHVK-IPAGKRCGFVQFANRTCAEQ 325
G T + V GLDP T++ ++ +GE++ K +P GK +V FA + AE
Sbjct: 295 GVLAGGATAKVVVRGLDPVCTEEEVERHLSHFGEIIQTKTVPGGK--AYVTFAEQQAAEN 352
Query: 326 ALSVLNGTQLGGQSIRL 342
A++ L+G +G + L
Sbjct: 353 AVTYLSGCFIGANRVGL 369
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P A S + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
A AER L T N + + R+ W+ R+ G IF+ +L + + L +
Sbjct: 63 ADAERALDTMNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNLDKSIDNKALYD 117
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
TF A + ++ KVV D SKGYGFV F + R++ +MNG+L + R + +G
Sbjct: 118 TFSA-FGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 174
Query: 246 TKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVK 305
++K + G T +++ + D+ LK +FG++G + VK
Sbjct: 175 SRK-------------EREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 306 IPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 222 VMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L + D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKEF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 60/325 (18%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SSD +L I L M E + S+F G+ S K++R++ T S GYGFI++V A
Sbjct: 498 SSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHPRDA 557
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER + NG Q P + ++++A + R D +++ L ++T L+ F
Sbjct: 558 ERAVCLLNGLQCP--PKTIKVSYARPNSSSIR-----DANLYINGLPKNMTQKELEHLFS 610
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG----------------- 231
Y + ++++TD+ +G S+G GF+RF +SE ++ +NG
Sbjct: 611 P-YGHIITSRILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPCGILEPLVVRFAHN 669
Query: 232 --------VLCST----------RPMRIG----PAATKKAATGQQYQKATYQNTQGSQGE 269
LC +P R G P T+ A Q +T +NT+ G
Sbjct: 670 QTQVTPQNPLCQLPHSSHGPLPPQPRRSGLNNTPIPTRAA---QNLTPSTTENTRDLVGV 726
Query: 270 NDPNNTT----IFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRCGFVQFAN 319
P T IF+ L P ++IL +FG +G + +VKI KR GFV +
Sbjct: 727 TFPGQTVTGWCIFIYNLAPDSDENILWQLFGPFGAVSNVKIIRDFNTNKCKRFGFVTMTS 786
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSW 344
A A++ LNG LGG+ +++S+
Sbjct: 787 YNEAALAIASLNGYCLGGRVLQVSF 811
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 262 NTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FV 315
+++ +G + + T + + L S+T++ L+++F + G++ K+ + G F+
Sbjct: 490 SSRAMEGTSSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFI 549
Query: 316 QFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEAYGY 375
+ + AE+A+ +LNG Q ++I++S+ R S+ D + G Q + +
Sbjct: 550 DYVHPRDAERAVCLLNGLQCPPKTIKVSYARPNSSSIRDANLYINGLPKNMTQKELEHLF 609
Query: 376 AP 377
+P
Sbjct: 610 SP 611
>gi|294884878|gb|ADF47447.1| TIA1-like protein [Dugesia japonica]
Length = 323
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 74 RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRN--KQTNFSEGYGFIEFVSHAAAERV 131
R++++G+L + + + IFG+ G+ +S +IR+ QTN Y FIE+ H++A
Sbjct: 7 RTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTN---PYAFIEYTDHSSASLA 63
Query: 132 LQTFNGTQMPSTEQNFRLNWAT--------YGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
L +G M + + ++NW++ + D IFVGD+ DV + +L
Sbjct: 64 LSAMDGIYMWNNQ--IKVNWSSGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPML 121
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F + + + AKVV G+S+G+ FV F + E R++ M+ R ++
Sbjct: 122 KEGF-SQFGQLIDAKVVR-YPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCN- 178
Query: 244 AATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVH 303
AT+ G+Q+ K T + + E NT ++V G ++T+++L F ++G +
Sbjct: 179 WATRNGLDGEQFIKYTPRPYELVYKEAPLTNTNVYVAG--ENLTEELLNCHFQEFGRIDS 236
Query: 304 VKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGR 346
VK+ K F+ F A +A+S +G ++ I+ +WG+
Sbjct: 237 VKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGK 279
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC-----GFVQFANRTCAEQAL 327
NN TI+VG L +V D +L +FG +G+ + I C F+++ + + A AL
Sbjct: 5 NNRTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLAL 64
Query: 328 SVLNGTQLGGQSIRLSWGRSPS 349
S ++G + I+++W PS
Sbjct: 65 SAMDGIYMWNNQIKVNWSSGPS 86
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E + F G +S ++ R+ T S GY ++ F++ A A++VL T
Sbjct: 11 SLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDT 70
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + ++ RL W+ A R+ G +F+ +L + + +L E F A + +
Sbjct: 71 MNFDMIQG--KSIRLMWSQRDAYLRKSGIG---NVFIKNLDRSIDNKMLYEHFSA-FGKI 124
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
+KV++D S+GY FV F +S R++ EMNG L + +GP +K +
Sbjct: 125 LSSKVMSDDKG--SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREAEL 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
KA T +++ + D+ LK VF QYG++V VK+
Sbjct: 183 QNKAN-------------EFTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKS 229
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQW 358
K GFV F A++A+ +NG + GQ + + + + +Q++ Q
Sbjct: 230 KGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQM 278
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +F G+ VS KV+ + S+G+GF+ F +H AA+R ++
Sbjct: 191 NVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGK-SKGFGFVSFDTHEAAQRAVEY 249
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG + E+ L R +++ +L + + L
Sbjct: 250 MNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDETIDEEQL 309
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + + S+ KV+ + GRSKG+G + F E ++M EMNG + ++ + I
Sbjct: 310 RRAFSS-FGSMSRVKVMEE--EGRSKGFGLICFSCPEEATKAMAEMNGQVLGSKAINIAL 366
Query: 244 A 244
A
Sbjct: 367 A 367
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQAL 327
+ +++VG L VT+D+L F G ++ ++I +R +V F N A++ L
Sbjct: 9 HASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVL 68
Query: 328 SVLNGTQLGGQSIRLSW 344
+N + G+SIRL W
Sbjct: 69 DTMNFDMIQGKSIRLMW 85
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + ES + +F G +S +V R+ T S GY +I F A AER L
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + Q R+ W+ G R+ G IF+ +L + + L +TF + +
Sbjct: 70 DTMNFEVIKG--QPIRIMWSHRDPGLRKSGMG---NIFIKNLENSIDNKALYDTF-STFG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
S+ +KVV + S+G+GFV F +++ MNG+L + R + +G ++
Sbjct: 124 SILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSR----- 176
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---- 308
Q + G T I+V L +V + L+ +F Q+G + VK+
Sbjct: 177 --------QKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNG 228
Query: 309 -GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
+ GFV F A++A+ +NG ++ GQ + + + + +QS+
Sbjct: 229 QSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSE 275
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + G ++++ +L ++E + +F G S KV+R+ S G+GF+ F H
Sbjct: 185 ARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ-SRGFGFVNFEKHEE 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A++ + NG ++ E+ L + RQ+ ++V +L
Sbjct: 244 AQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L+E F + Y + AKV+T+ + SKG+GFV F E +++TEMNG + T
Sbjct: 304 SINDERLKEVF-STYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEMNGRIVGT 360
Query: 237 RPMRIGPAATK---KAATGQQYQK 257
+P+ + A K KA QY++
Sbjct: 361 KPLYVALAQRKEERKAILTNQYRR 384
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 25/271 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L+P + E+ + +F H G S +V R+ T S GY ++ + + + E+ L+
Sbjct: 62 SLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 121
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 122 LNYTVI--NGRPCRIMWSQRDPALRKNGQG---NVFIKNLDVAIDNKALHDTF-AAFGNI 175
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + + +++ +NG+L + + + +G KK
Sbjct: 176 LSCKVAQDE-HGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKK------ 228
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AG 309
+ Q E N T ++V ++ +DD + +F +YGE+ +
Sbjct: 229 -------DRQSKFEEMKANFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKS 281
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ GFV F A QA+ LNG GQ +
Sbjct: 282 RGFGFVNFTTHEAASQAVEELNGKDFRGQDL 312
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 91/248 (36%), Gaps = 65/248 (26%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + +F GE S + R+ Q S G+GF+ F +H AA + ++
Sbjct: 243 NVYVKNINSEASDDEFRDLFTKYGEVTSSSLARD-QEGKSRGFGFVNFTTHEAASQAVEE 301
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG E+ L + A + + + +++ +L+ DV D
Sbjct: 302 LNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLSDDVDD--- 358
Query: 184 QETFRAVYSS---VKGAKVVTDRTT----------------------------------- 205
E RA++S + AKV+ D +
Sbjct: 359 -EKLRAMFSEFGPITSAKVMRDSISEGEDEEKAEEETPAPEAEVKKEDSEADADSQEAAD 417
Query: 206 -----------GRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
G+SKG+GFV F + + +++ +MN + +P+ + A K Q
Sbjct: 418 KKDAKKGDKKLGKSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQL 477
Query: 255 YQKATYQN 262
Q +N
Sbjct: 478 EQSIQARN 485
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 20/118 (16%)
Query: 258 ATYQNTQGSQGEND-----PNNT--------TIFVGGLDPSVTDDILKTVFGQYGELVHV 304
A N +G+QG+ D PN+ +++VG L+P VT+ +L +F G + +
Sbjct: 31 AINTNVEGAQGDADTAGPTPNSAVPQPQASASLYVGELEPQVTEAMLFELFSHIGPVASI 90
Query: 305 KI---PAGKRC---GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQ 355
++ +R +V + + E+AL LN T + G+ R+ W R P+ +++ Q
Sbjct: 91 RVCRDAVTRRSLGYAYVNYNTTSDGEKALEELNYTVINGRPCRIMWSQRDPALRKNGQ 148
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 25/271 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G S +V R+ T S GY ++ + + A ++ +Q
Sbjct: 51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQE 110
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N ++ + R+ W+ R++ G IF+ +L + + L ETF + + V
Sbjct: 111 LNYAEING--RPCRIMWSERDPAIRKKGSG---NIFIKNLHPAIDNKALHETF-STFGEV 164
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G S+G+GFV F +ES+ ++ +NG+L + + + KK +
Sbjct: 165 LSCKVALDE-NGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISK- 222
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----- 309
E N T I+V +D TD+ + +F QYGE+V +
Sbjct: 223 ------------LEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKP 270
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
K GFV F + A +A+ LNG + Q++
Sbjct: 271 KGFGFVNFVDHNAAAKAVEELNGKEFKSQAL 301
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 18/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L P ++ + F GE +S KV ++ N S G+GF+ F
Sbjct: 130 PAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGN-SRGFGFVHFKEE 188
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
+ A+ ++ NG M E ++ + ++ +FT I+V ++ + TD +
Sbjct: 189 SDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFE 248
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
+ F + Y + A + D G+ KG+GFV F D + +++ E+NG ++ + +G A
Sbjct: 249 QLF-SQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRA 306
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K +QY++ + QG N +F+ LD S+ D+ LK F YG +
Sbjct: 307 QKKYERAEELKKQYEQYRLEKLAKFQGVN------LFIKNLDDSIDDEKLKEEFAPYGTI 360
Query: 302 VHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
++ K GFV F++ A +A++ N + G+ + ++ + ++S A
Sbjct: 361 TSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVRRSQLA 420
Query: 357 Q 357
Q
Sbjct: 421 Q 421
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ + +F GE VS + ++ + +G+GF+ FV H AA + ++
Sbjct: 232 NIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGK-PKGFGFVNFVDHNAAAKAVEE 290
Query: 135 FNGTQMPSTEQNFRLNWATYGAGER--------RQDDGPDF---TIFVGDLAADVTDYVL 183
NG + S Y E R + F +F+ +L + D L
Sbjct: 291 LNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKL 350
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A Y ++ A+V+ D+ G SKG+GFV F E ++MTE N + + +P+ +
Sbjct: 351 KEEF-APYGTITSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAI 408
Query: 244 AATKKAATGQQYQKATYQN 262
A K Q Q+ +N
Sbjct: 409 AQRKDVRRSQLAQQIQARN 427
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 273 NNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI------PAGKRCGFVQFANRTCAEQA 326
NN +++VG LDP++T+ +L VF G + +++ A +V + + ++A
Sbjct: 48 NNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKA 107
Query: 327 LSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
+ LN ++ G+ R+ W R P+ ++
Sbjct: 108 IQELNYAEINGRPCRIMWSERDPAIRKK 135
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 34/317 (10%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
PP P P PP AP AS+ SL++G+L P + E+ + IF G S
Sbjct: 20 PPSVPVPAPYNPP---------APQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVAS 70
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+V R+ T S GY ++ +++ A ER L+ N + + + R+ W+ R+
Sbjct: 71 IRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIMWSQRDPALRKTG 128
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
G +F+ +L + + L +TF A + +V KV TD GRSKGYGFV +
Sbjct: 129 QG---NVFIKNLDEAIDNKALHDTFVA-FGNVLSCKVATDE-HGRSKGYGFVHYETAEAA 183
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++ +NG+L + + + +G ++K Q E T +++ L
Sbjct: 184 DNAIKSVNGMLLNDKKVYVGHHISRK-------------ERQSKLDEMKAQFTNLYIKNL 230
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGG 337
D VT + +F +YG + + K GFV + A++A+ L+ T L G
Sbjct: 231 DTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKG 290
Query: 338 QSIRLSWGRSPSNKQSD 354
+ + ++ + + ++ +
Sbjct: 291 KKLFVARAQKKAEREDE 307
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L+I +L + + +F G S V +++ S+G+GF+ + H A+R +
Sbjct: 224 NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK-SKGFGFVNYERHEEAQRAVDE 282
Query: 135 FNGTQMP-----------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ T + E+ L + A + +++ +L D D L
Sbjct: 283 LHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFDDDKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ KV+ D G SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 343 RAEFEP-FGAITSCKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS- 399
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 400 LAQRREVRRQQLESQIAQRNQ 420
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 11/210 (5%)
Query: 167 FTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSM 226
F IFVGDL++++ L+E F + + +VV D T +SKGYGFV F +SE ++
Sbjct: 171 FHIFVGDLSSEIETQQLREAFTP-FGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 229
Query: 227 TEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSV 286
T MNG +R +R A K A+ + + T+ ++ P+N T++VGG++ ++
Sbjct: 230 TAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYN---QSSPSNCTVYVGGVNSAL 286
Query: 287 T---DDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLS 343
T +++L+ F YG + +++ K FV+F+ + A A+ ++ T++ Q ++ S
Sbjct: 287 TALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 346
Query: 344 WGRS---PSNKQSDQAQ-WNGGGYYGFAQG 369
WG+ P+N QS +Q N GF G
Sbjct: 347 WGKESGDPNNSQSMASQALNSAAAAGFPYG 376
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 76 LWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTF 135
+++GDL +E + F GE +V+R+ QT S+GYGF+ F+ + AE +
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 136 NGTQMPSTEQNFRLNWATYGAGERRQDDGP-------------DFTIFVGDLAADVT--- 179
NG + S ++ R NWAT +++ P + T++VG + + +T
Sbjct: 233 NGQWLGS--RSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALS 290
Query: 180 DYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPM 239
+ VLQ+TF A Y +++ +V D KGY FVRF + ++ ++ + +P+
Sbjct: 291 EEVLQKTF-APYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPV 343
Query: 240 R 240
+
Sbjct: 344 K 344
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 26/272 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + +F G+ S +V R+ T S GY ++ + + A ER L+
Sbjct: 52 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEE 111
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + + R+ W+ R+ G +F+ +L + + L +TF A + ++
Sbjct: 112 LNYTLIKG--RPCRIMWSQRDPALRKTGHG---NVFIKNLDIAIDNKALHDTF-AAFGNI 165
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G SKGYGFV + ++ +NG+L + + + +G KK
Sbjct: 166 LSCKVAQDE-NGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYVGHHIPKK------ 218
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------A 308
Q E N T ++V +DP V+DD +T+F +G++ +
Sbjct: 219 -------ERQSKFDEMKANFTNVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGT 271
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
+ GFV F++ A A+ L+ T+L GQ++
Sbjct: 272 SRGFGFVNFSSHEAAAAAVDALHETELKGQAL 303
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + ++F + G+ S + R+ + S G+GF+ F SH AA +
Sbjct: 233 NVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSHEAAAAAVDA 292
Query: 135 FNGTQMP-------------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDY 181
+ T++ E+ R + + + G ++V +L ++ D
Sbjct: 293 LHETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQG--VNLYVKNLDDEIDDE 350
Query: 182 VLQETFRAVYSSVKGAKVV------------------------TDRTTGRSKGYGFVRFG 217
L++ F + Y ++ AKV+ TD+ G+SKG+GFV F
Sbjct: 351 RLRQEF-SPYGTITSAKVMRDSLDSPKEKDGEESKVGEPEEKATDKKQGKSKGFGFVCFS 409
Query: 218 DESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQ 253
+ E +++ EMN + + +P+ + A K Q
Sbjct: 410 NPDEASKAVAEMNQRMVNGKPLYVALAQRKDVRKSQ 445
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 26/291 (8%)
Query: 69 SSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAA 128
SS + SL++GDL P + E+ + F G +S +V R+ T S GY ++ F A A
Sbjct: 6 SSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 129 ERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFR 188
ER L T N + + R+ W+ R+ G +F+ +L + + L +TF
Sbjct: 66 ERALDTMNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNLDKSIDNKALYDTFS 120
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
A + ++ KVV D SKGY FV F + R++ +MNG+L + R + +G ++K
Sbjct: 121 A-FGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRK 177
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKI-- 306
+ G T +++ + D+ LK +F +YG+ + VK+
Sbjct: 178 -------------EREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMT 224
Query: 307 -PAGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
P GK GFV F A +A+ +NG + G+ + + + +Q++
Sbjct: 225 DPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAE 275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+GY F+ F +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQ 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA+R ++ NG + + ++ + + + R+ + +FT +++ + D+ D
Sbjct: 149 DAADRAIEKMNGMLL----NDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDD 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F + Y KV+TD TG+SKG+GFV F + +++ EMNG + + +
Sbjct: 205 ERLKELF-SKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVF 262
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A K +A +++++ + QG N +++ LD ++ D+ L+ F
Sbjct: 263 VGRAQKKVERQAELKRRFEQLKQERISRYQGVN------LYIKNLDDTIDDEKLRKEFSP 316
Query: 298 YGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
+G + K+ K GFV F++ A +A++ +NG +G + + ++ + +++
Sbjct: 317 FGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 68 ASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAA 127
A + +++I + M++ + +F G+ +S KV+ + T S+G+GF+ F H
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDP-TGKSKGFGFVSFEKHED 243
Query: 128 AERVLQTFNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAA 176
A + ++ NG + E+ L + R +++ +L
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 303
Query: 177 DVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCST 236
+ D L++ F + + S+ AKV+ + GRSKG+GFV F E +++TEMNG + +
Sbjct: 304 TIDDEKLRKEF-SPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 237 RPMRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTI 277
+P+ + A K KA QY Q G + P NT I
Sbjct: 361 KPLYVALAQRKEERKAHLTNQY----MQRIAGMRAL--PANTII 398
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 34/310 (10%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
PPVG P PP+ P P+A+ + SL+IGDL + ES + F G +S
Sbjct: 30 PPVGMGP----PPANMGYP----PNATYS-MASLYIGDLHGDVTESMLFEKFSMAGPVLS 80
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+V R+ + S GY ++ F A AER L T N + + R+ W+ RR
Sbjct: 81 IRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFETIHG--RPMRIMWSQRDPAARRAG 138
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
+G IF+ +L + + + +TF +++ ++ KV D G S+GYGFV F E
Sbjct: 139 NG---NIFIKNLDRVIDNKSIYDTF-SLFGNILSCKVAADE-DGSSRGYGFVHFETEESA 193
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++ ++NG+L S + + +G T+ Q+ ++ GE+ T +FV
Sbjct: 194 QIAIEKVNGMLLSGKKVYVGKFQTR----AQRLKEL---------GESGLKYTNVFVKNF 240
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPAG-----KRCGFVQFANRTCAEQALSVLNGTQLGG 337
+ + L +F +YGE+ + K GFV +A+ A++A+ LN L G
Sbjct: 241 GEHLDQEKLTKMFSKYGEITSAVVMTDADGKPKGFGFVAYADPDAAQKAVDDLNEKTLEG 300
Query: 338 QSIRLSWGRS 347
++LS R+
Sbjct: 301 TDLKLSVCRA 310
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ + +++ + +F GE S V+ + +G+GF+ + AA++ +
Sbjct: 234 NVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTDADGK-PKGFGFVAYADPDAAQKAVDD 292
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDF--------------TIFVGDLAADVTD 180
N + T+ + A + ER D + ++V ++ ++TD
Sbjct: 293 LNEKTLEGTDLKLSVCRAQKKS-ERTADLKRKYEALKQERVQRYQGVNLYVKNIDEELTD 351
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+ F A + ++ AKV+ D GRSKG+GFV F E ++TEMN + ++P+
Sbjct: 352 EGLRAHF-ASFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTEMNSKMMGSKPLY 409
Query: 241 IGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIF 278
+ A K +A QY + G Q P I+
Sbjct: 410 VALAQRKEDRRAQLASQYMQKLATLRMGQQTNGVPGMAPIY 450
>gi|213515090|ref|NP_001135023.1| cytotoxic granule-associated RNA binding protein 1 [Salmo salar]
gi|209738084|gb|ACI69911.1| Nucleolysin TIA-1 [Salmo salar]
Length = 409
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 138/286 (48%), Gaps = 17/286 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ----TNFSEGYGFIEFVSHAAAER 130
+L IG++ ++E+ + SI +F G+ + K N + Y F+ F A
Sbjct: 22 TLHIGNIHSAVDENVLVSILQ---QFFPGQGFQCKLFPDPNNSPDLYCFMTFADVNTATS 78
Query: 131 VLQTFNGTQMPSTEQNFRLNWATYGAGERRQD--DGPDFTIFVGDLAADVTDYVLQETFR 188
L NG ++ + +++WA+ GAG+ +Q G +I+VGDL + D +L + FR
Sbjct: 79 ALSILNGREV--MGKKLKVSWASGGAGQFKQSQISGTTHSIYVGDLPHECDDNMLAQAFR 136
Query: 189 AVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKK 248
+ V ++VV D +G SKG+GF+ + + E ++ +M+G S++ +++ A K
Sbjct: 137 P-FGEVLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGTISSKSVKVSWATRSK 195
Query: 249 AATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA 308
A T + Y + G + NTT++VG L S+ + L + F YG ++ KI
Sbjct: 196 ATTS--VPQLNYNDVYQQSGAH---NTTLYVGNLPESMKEQFLISFFEPYGAVLDTKIFH 250
Query: 309 GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K F++ A ++ NG + G +++ W R N Q +
Sbjct: 251 DKHFAFIKMDTHEAAATSIVKCNGQPVDGCVMKVWWSRDNPNLQGN 296
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 61 PYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFI 120
P AP + SL++G+L P + E+ + +F G+ S +V R+ T S GY ++
Sbjct: 48 PTSAAPSTAHPNSASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYV 107
Query: 121 EFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTD 180
+ S ER L+ N T + + R+ W+ R+ G +F+ +L + +
Sbjct: 108 NYNSANDGERALEELNYTLIKG--RPCRIMWSQRDPALRKTGHG---NVFIKNLDGAIDN 162
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L +TF A + ++ KV D G SKGYGFV + +++ +NG+L + + +
Sbjct: 163 KALHDTF-AAFGNILSCKVAVDE-LGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVF 220
Query: 241 IGPAATKKAATGQ-QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYG 299
+G KK + + KA + T I+V ++ VTDD + +F +YG
Sbjct: 221 VGHHIPKKDRMSKFEEMKANF--------------TNIYVKNIETEVTDDEFRELFEKYG 266
Query: 300 ELVHVKIPAGKRC------GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
E+ + GFV + N A +A+ LN + GQ +L GR+
Sbjct: 267 EITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQ--KLYVGRA 318
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 34/317 (10%)
Query: 43 PPVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVS 102
PP P P PP AP AS+ SL++G+L P + E+ + IF G S
Sbjct: 20 PPSVPVPAPYNPP---------APQASTAPSASLYVGELDPTVTEAMLFEIFNMIGPVAS 70
Query: 103 GKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQD 162
+V R+ T S GY ++ +++ A ER L+ N + + + R+ W+ R+
Sbjct: 71 IRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLI--KNRACRIMWSQRDPALRKTG 128
Query: 163 DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQ 222
G +F+ +L + + L +TF A + +V KV TD GRSKGYGFV +
Sbjct: 129 QG---NVFIKNLDEAIDNKALHDTFVA-FGNVLSCKVATDE-HGRSKGYGFVHYETAEAA 183
Query: 223 LRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
++ +NG+L + + + +G ++K Q E T +++ L
Sbjct: 184 DNAIKSVNGMLLNDKKVYVGHHISRK-------------ERQSKLDEMKAQFTNLYIKNL 230
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGG 337
D VT + +F +YG + + K GFV + A++A+ L+ T L G
Sbjct: 231 DTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKG 290
Query: 338 QSIRLSWGRSPSNKQSD 354
+ + ++ + + ++ +
Sbjct: 291 KKLFVARAQKKAEREDE 307
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+L+I +L + + +F G S V +++ S+G+GF+ + H A+R +
Sbjct: 224 NLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGK-SKGFGFVNYERHEEAQRAVDE 282
Query: 135 FNGTQMP-----------STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
+ T + E+ L + A + +++ +L D D L
Sbjct: 283 LHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFDDDKL 342
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+ F + ++ KV+ D G SKG+GFV F E +++ EMN + T+P+ +
Sbjct: 343 RAEFEP-FGAITSCKVMRDEK-GTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVS- 399
Query: 244 AATKKAATGQQYQKATYQNTQ 264
A ++ QQ + Q Q
Sbjct: 400 LAQRREVRRQQLESQIAQRNQ 420
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 26/276 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + IF S ++ R+ T S GY ++ + S A AER L T
Sbjct: 13 SLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDT 72
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + S + R+ W RR ++G +FV +L + + L +TF +++ ++
Sbjct: 73 LNFTCIRS--RPCRIMWCLRDPASRRNNEG---NVFVKNLDKSIDNKTLFDTF-SLFGNI 126
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD + G S GYGF+ F ++ +NG++ RP+ +G
Sbjct: 127 MSCKIATD-SEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVG------------ 173
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
+Q E D T ++V + + +++ L T+FG YG++ + + + G+
Sbjct: 174 ----KFQRKAERFSEKDKTFTNVYVKHIPKTWSEETLHTLFGVYGKISSLVLQSDSKGRP 229
Query: 312 CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
GFV F + A++A++ L+ + + L+ S
Sbjct: 230 FGFVNFEDPESAKKAVANLHNALVTPLGVELNSNNS 265
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 169 IFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE 228
++V +L+ +T+ L+ F Y ++ + TD + G S+G+GFV F E +++TE
Sbjct: 362 LYVKNLSESMTESDLRSLFEP-YGTISSVSIKTDES-GISRGFGFVSFLSPDEATKAITE 419
Query: 229 MNGVLCSTRPMRIG 242
M+ L +P+ +G
Sbjct: 420 MHLKLVRGKPLYVG 433
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T S GY + F A AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G +F+ +L + + L +TF A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NVFIKNLNKTIDNKALYDTFSA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV+D SKG+GFV F E R++ +MNG+L + R + +G ++K
Sbjct: 126 LSCKVVSDENG--SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQK------ 177
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
+ G T +++ + D+ L +FG++G+++ VK+
Sbjct: 178 -------EREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKS 230
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A+ +NG +L G+ I + + ++ ++
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTE 275
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 140/302 (46%), Gaps = 30/302 (9%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I +L ++ + F G +S KV+ ++ N S+G+GF+ F +
Sbjct: 91 PSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETE 148
Query: 126 AAAERVLQTFNGTQMPSTE------QNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADV 178
AAER ++ NG + + ++ + A G G + +FT +++ + +
Sbjct: 149 EAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTK------EFTNVYIKNFGDRM 202
Query: 179 TDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRP 238
D L F + + KV+TD G+SKG+GFV F + +++ EMNG + +
Sbjct: 203 DDETLNGLF-GRFGQILSVKVMTDEG-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKH 260
Query: 239 MRIGPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVF 295
+ +G A K ++++ T + QG N ++V LD + D+ L+ F
Sbjct: 261 IYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGIN------LYVKNLDDGIDDERLQKEF 314
Query: 296 GQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNK 351
+G + K+ K GFV F++ A +A+S +NG + + + ++ + +
Sbjct: 315 SPFGTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEER 374
Query: 352 QS 353
Q+
Sbjct: 375 QA 376
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL DVT+ +L E F + + +V D T RS GY V F ++ R
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSSA-GPILSIRVYRDVITRRSLGYASVNFEQPADAER 67
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++ MN + +P+RI Q + ++ G+ +F+ L+
Sbjct: 68 ALDTMNFDVIKGKPVRI---------MWSQRDPSLRRSGVGN----------VFIKNLNK 108
Query: 285 SVTDDILKTVFGQYGELVHVKIPA----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSI 340
++ + L F +G ++ K+ + K GFV F AE+A+ +NG L + +
Sbjct: 109 TIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKV 168
Query: 341 RLSWGRSPSNKQSD 354
+ GR S K+ +
Sbjct: 169 FV--GRFKSQKERE 180
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL P + E+ + F G +S +V R+ T Y ++ F AER L T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALDT 71
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + R+ W+ RR G IFV +L + + VL +T A + ++
Sbjct: 72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NIFVKNLDKSINNKVLYDTASA-FGNI 125
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KVV D SKGYGFV F R++ +MNG+L + R + +G ++K +
Sbjct: 126 LSCKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE- 182
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----G 309
G++ + PN +++ + D+ LK +FG++G + VK+
Sbjct: 183 ---------LGARAKEFPN---VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKS 230
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F A++A+ +NG +L G+ I + + +Q++
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE 275
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++I + M++ + +FG G +S KV+ + ++ S+G+GF+ F H A++ +
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 135 FNGTQM-----------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
NG ++ E+ L + R ++V +L D+ D L
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERL 310
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
++ F + + ++ AKV+ + GRSKG+GFV F E +++TEMNG + +T+P+ +
Sbjct: 311 RKAF-SPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 244 AATKK 248
A K+
Sbjct: 368 AQRKE 372
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 27/264 (10%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL + E+ + IF G S +V R+ T S GY ++ + + A AER L T
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T + Q RL W+ R+ G IFV +L + + L +TF +++ ++
Sbjct: 77 LNYTNIKG--QPARLMWSHRDPSLRKSGAG---NIFVKNLDKSIDNKALFDTF-SMFGNI 130
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+SK YGFV + DE ++ ++NG+ ++ + +G K
Sbjct: 131 LSCKVATDE-FGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKS------ 183
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA---GKR 311
++AT ND T ++V SVT+ LK +F YGE+ + + ++
Sbjct: 184 -ERAT----------NDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSMIVKTDNKNRK 232
Query: 312 CGFVQFANRTCAEQALSVLNGTQL 335
F+ +A+ A+ A+ LNG ++
Sbjct: 233 FCFINYADSESAKNAMENLNGKKI 256
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 35/183 (19%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL DVT+ VL E F V V +V D T +S GY +V + + ++ R++
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTV-GHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 228 EMNGVLCSTRPMRI-----GPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGL 282
+N +P R+ P+ K A IFV L
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGAG------------------------NIFVKNL 111
Query: 283 DPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGG 337
D S+ + L F +G ++ K+ K GFV + + A++A+ +NG QLG
Sbjct: 112 DKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGS 171
Query: 338 QSI 340
+++
Sbjct: 172 KNV 174
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAG----KRCG--FVQFANRTCAEQALSV 329
+++VG L+ VT+ +L +F G + +++ K G +V + N AE+AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76
Query: 330 LNGTQLGGQSIRLSWG-RSPSNKQS 353
LN T + GQ RL W R PS ++S
Sbjct: 77 LNYTNIKGQPARLMWSHRDPSLRKS 101
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++ +L + D L+E F Y ++ AKV+ D +SKG+GFV F + E +++T
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEP-YGTITSAKVMRDDKE-QSKGFGFVCFALQEEANKAVT 507
Query: 228 EMNGVLCSTRPMRIGPAATKK 248
EM+ + + +P+ +G A ++
Sbjct: 508 EMHLKIINGKPLYVGLAEKRE 528
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 28/297 (9%)
Query: 44 PVGWTPQPVPPPSQQTQPYGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSG 103
PV QP P + GV DA SL++GDL + +S + +F G+ VS
Sbjct: 11 PVAVAAQPSPATNGIANNGGVG-DARQFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSV 69
Query: 104 KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD 163
+V R+ T S GYG++ + + A R L N T P + R+ ++ R+
Sbjct: 70 RVCRDLSTRRSLGYGYVNYNAAHEATRALDELNFT--PLNGKPIRIMYSYRDPTIRKSGA 127
Query: 164 GPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQL 223
G IF+ +L + + L +TF + + ++ KV TD + G+S+GYGFV+F +E
Sbjct: 128 G---NIFIKNLDKSIDNKALHDTF-STFGNILSCKVATD-SLGQSRGYGFVQFDNEESAK 182
Query: 224 RSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLD 283
++ ++NG+L + + + +GP K Q +++T T+ NN ++V L
Sbjct: 183 SAIDKLNGMLLNDKQVFVGPFLRK------QERESTADKTRF-------NN--VYVKNLS 227
Query: 284 PSVTDDILKTVFGQYGELVHVKI---PAGK-RC-GFVQFANRTCAEQALSVLNGTQL 335
+ T+D LK +FG++G + + GK +C GFV F + A +++ LNG +
Sbjct: 228 ETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALNGKKF 284
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 19/303 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S GYGF++F +
Sbjct: 120 PTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQ-SRGYGFVQFDNE 178
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ + NG + + +Q F + E D ++V +L+ T+ L++
Sbjct: 179 ESAKSAIDKLNGMLL-NDKQVFVGPFLRKQERESTADKTRFNNVYVKNLSETTTEDDLKK 237
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F + + V+ D G+SK +GFV F D + RS+ +NG + +G A
Sbjct: 238 IF-GEFGIITSTAVMRD-ADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQ 295
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + +++++ + +G N ++V LD S++DD LK +F ++G +
Sbjct: 296 KKYEREMELKGKFEQSLKETADKFEGLN------LYVKNLDDSISDDKLKELFSEFGTIT 349
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQA 356
K+ P G + GFV F+ A +AL+ +NG + + + ++ R + QA
Sbjct: 350 SCKVMRDPNGISRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALAQRKEERRARLQA 409
Query: 357 QWN 359
Q++
Sbjct: 410 QFS 412
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 274 NTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFANRTCAEQAL 327
+T+++VG LD SV D L +F Q G++V V++ + +R G+V + A +AL
Sbjct: 39 STSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRAL 98
Query: 328 SVLNGTQLGGQSIRLSWG-RSPSNKQS 353
LN T L G+ IR+ + R P+ ++S
Sbjct: 99 DELNFTPLNGKPIRIMYSYRDPTIRKS 125
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 135/268 (50%), Gaps = 24/268 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+P + E+ + +F G S +V R+ T S GY ++ F + A AER L T
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDT 94
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + P + R+ W+ R+ + +FV +L + + L +TF +++ ++
Sbjct: 95 LNYS--PIRGKQCRIMWSHRDPTLRKAGNA---NVFVKNLDKTIDNKALYDTF-SLFGNI 148
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV TD G+S+GYGFV F ++ +++T++NG++ + + +GP
Sbjct: 149 LSCKVATD-DDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGP----------- 196
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPS-VTDDILKTVFGQYGELVHVKI---PAGK 310
+QK + Q G+ T +++ L S T++ ++ F ++G++ V I G+
Sbjct: 197 FQKHAERAEQ--HGDEPRKFTNVYIKHLPESWTTEEDVQKAFEEFGKITSVAIQTDRKGR 254
Query: 311 RCGFVQFANRTCAEQALSVLNGTQLGGQ 338
R FV + + A +A+ +NG + Q
Sbjct: 255 RFAFVNYEDFDSAAKAVEAMNGKDMRTQ 282
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 168 TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMT 227
+++VGDL DVT+ +L E F V V +V D T RS GY +V F + ++ R++
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGV-GPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALD 93
Query: 228 EMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVT 287
+N P K+ ++ T + N +FV LD ++
Sbjct: 94 TLN----------YSPIRGKQCRIMWSHRDPTLRKA---------GNANVFVKNLDKTID 134
Query: 288 DDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRL 342
+ L F +G ++ K+ + GFV F N A +A++ LNG +G +++ +
Sbjct: 135 NKALYDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYV 194
Query: 343 SWGRSPSNKQSDQAQWNGGGYYGFAQGY 370
P K +++A+ +G F Y
Sbjct: 195 ----GPFQKHAERAEQHGDEPRKFTNVY 218
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 142/362 (39%), Gaps = 51/362 (14%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G ++++ +L ++ + F G +S KV + S GYGF+ F +
Sbjct: 114 PTLRKAGNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVATDDDGK-SRGYGFVHFEND 172
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAAD-VTDYVL 183
+A + + NG + E+ D+ FT +++ L T+ +
Sbjct: 173 ESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQHGDEPRKFTNVYIKHLPESWTTEEDV 232
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTR------ 237
Q+ F + + + TDR + + + FV + D +++ MNG T+
Sbjct: 233 QKAFEE-FGKITSVAIQTDR---KGRRFAFVNYEDFDSAAKAVEAMNGKDMRTQEEIDAG 288
Query: 238 -----------------PMRIGPAATKKAATGQQYQKATYQNTQ--GSQGENDPNNTTIF 278
+ + A TK + + K +NT+ G+Q N ++
Sbjct: 289 KGEEESTEEGSDEMPEYKLYVTRAQTKTERSAELRNKFQAKNTEKVGNQSCN------LY 342
Query: 279 VGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCG------FVQFANRTCAEQALSVLNG 332
V L V D+ L+ +F Q+GE+ K+ + G FV FAN+ E+A+ ++
Sbjct: 343 VKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQAMHL 402
Query: 333 TQLGGQSIRLSWG--RSPSNKQSDQAQWNGGGYYGFAQGYEAY----GYAPPTQDPNMYY 386
GG+ + ++ R ++ Q G GF Q Y+ Y + P P MYY
Sbjct: 403 KLYGGKPLFVAVAEKRDARIERLQQRYRAGIPMGGFQQNYQGYRGPRNFNAPNPSP-MYY 461
Query: 387 GG 388
G
Sbjct: 462 SG 463
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 38/300 (12%)
Query: 64 VAPD-ASSDGIR----------SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTN 112
VAPD A+SD SL++G+L P + E+ + +F G+ S +V R+ T
Sbjct: 29 VAPDTATSDAATTPNPNQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTR 88
Query: 113 FSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVG 172
S GY ++ + + A ER L+ N T + + R+ W+ R+ G +F+
Sbjct: 89 RSLGYAYVNYNNTADGERALEDLNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIK 143
Query: 173 DLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGV 232
+L + + L +TF A + ++ KV D G SKGYGFV + ++ +NG+
Sbjct: 144 NLDTAIDNKALHDTF-AAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGM 201
Query: 233 LCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILK 292
L + + + +G +KK + Q E N T ++V +DP VTD+ +
Sbjct: 202 LLNDKKVFVGHHISKK-------------DRQSKFEEMKANFTNVYVKNIDPEVTDEEFR 248
Query: 293 TVFGQYGELVHVKIP---AGKR--CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 347
+FG+YG++ I +GK GFV + + A+ A+ LN Q +L GR+
Sbjct: 249 ELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQNAQSAVDELNDKDFHSQ--KLYVGRA 306
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 90/247 (36%), Gaps = 60/247 (24%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
++++ ++ P + + +FG G+ S + R+ + S G+GF+ +V H A+ +
Sbjct: 232 NVYVKNIDPEVTDEEFRELFGKYGDITSATISRD-DSGKSRGFGFVNYVDHQNAQSAVDE 290
Query: 135 FN-----------GTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
N G E+ L A + ++V +L DV D L
Sbjct: 291 LNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDDKL 350
Query: 184 QETFRAVYSSVKGAKVVTD----------------------------------------- 202
+E F + + ++ AKV+ D
Sbjct: 351 RELF-SPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAEDEEKTE 409
Query: 203 ------RTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQ 256
+ G+SKG+GFV F E +++TEMN + + +P+ + A K Q
Sbjct: 410 TKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEA 469
Query: 257 KATYQNT 263
+NT
Sbjct: 470 SIQARNT 476
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ F++ A ER ++
Sbjct: 48 SLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 107
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N + + + R+ W+ RR G IF+ +L A + + L +TF A + ++
Sbjct: 108 LNYSLI--RNRPCRIMWSQRDPALRRTGQG---NIFIKNLDAGIDNKALHDTF-AAFGNI 161
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV T+ T S GYGFV + ++ +NG+L + + + +G +K
Sbjct: 162 LSCKVATNETG--SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRK------ 213
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP-----AG 309
Q E N T ++ +DP VTDD + +F ++G++ +
Sbjct: 214 -------ERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKS 266
Query: 310 KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
K GFV F + A++A+ L+ + GQ + ++ + S ++ +
Sbjct: 267 KGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEE 311
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
+++ ++ P + + +F G+ S V++ + S+G+GF+ F H A++ +
Sbjct: 228 NVYAKNVDPEVTDDEFEKLFTKFGKITSC-VLQRDEDGKSKGFGFVNFEDHNEAQKAVDE 286
Query: 135 -----FNGTQM------PSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVL 183
F G ++ +E+ L + A + +++ ++ D L
Sbjct: 287 LHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERL 346
Query: 184 QETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGP 243
+E F A + ++ K++ +G S+G+GFV + E ++++EMNG + RP+ +
Sbjct: 347 REEF-APFGAITSCKIMRA-PSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVAL 404
Query: 244 AATK 247
A K
Sbjct: 405 AQRK 408
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 73 IRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVL 132
+ SL++GDL P + E+ + F G +S +V R+ T S GY +I F A AE L
Sbjct: 10 LASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECAL 69
Query: 133 QTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYS 192
T N + + R+ W+ G R+ G IF+ ++ + + L +TF A +
Sbjct: 70 DTMNYDVIKG--RPIRIMWSQRDPGLRKSGVG---NIFIKNMDESIDNKALYDTFSA-FG 123
Query: 193 SVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATG 252
++ KVV D SKGYGFV F E R++ MNG+L + R + +G ++K
Sbjct: 124 NILSCKVVCDERG--SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREE 181
Query: 253 QQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR- 311
+ KA T I++ D+ LK VF +G + V++ +R
Sbjct: 182 ELGSKAL-------------KFTNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERG 228
Query: 312 ----CGFVQFANRTCAEQALSVLNGTQLGGQSI 340
GFV FA+ A++A+ +NG +L G+ I
Sbjct: 229 RSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVI 261
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 144/300 (48%), Gaps = 26/300 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G+ +++I ++ ++ + F G +S KV+ +++ S+GYGF+ F +
Sbjct: 91 PGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERG--SKGYGFVHFETE 148
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDD----GPDFT-IFVGDLAADVTD 180
AA R ++T NG + + ++ + + + R+++ FT I++ + D D
Sbjct: 149 EAANRAIETMNGMLL----NDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYND 204
Query: 181 YVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
L+E F A + +V+ D GRS+G+GFV F + +++ EMNG + + +
Sbjct: 205 EKLKEVF-AAFGRTLSVRVMKDER-GRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIY 262
Query: 241 IGPAATKKAATGQ---QYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQ 297
+G A + G+ +++ Q QG N ++V LD S+ D+ L+ F
Sbjct: 263 VGRAQKRLERQGELKRKFELIKQDRIQRYQGVN------LYVKNLDDSIDDERLRKEFAP 316
Query: 298 YGELVHVKI----PAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQS 353
YG + K+ P + GFV F++ A +A++ +NG + + + ++ + +++
Sbjct: 317 YGTITSAKVMTDGPQSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKA 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 24/194 (12%)
Query: 165 PDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
P +++VGDL DVT+ +L + F + +V D T RS GY ++ F ++
Sbjct: 9 PLASLYVGDLHPDVTEAMLYQKFSPA-GPIMSIRVCRDIITRRSLGYAYINFQQPADAEC 67
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDP 284
++ MN + RP+RI +Q G IF+ +D
Sbjct: 68 ALDTMNYDVIKGRPIRI-------------------MWSQRDPGLRKSGVGNIFIKNMDE 108
Query: 285 SVTDDILKTVFGQYGELVHVKIPAGKR----CGFVQFANRTCAEQALSVLNGTQLGGQSI 340
S+ + L F +G ++ K+ +R GFV F A +A+ +NG L + +
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETEEAANRAIETMNGMLLNDRKV 168
Query: 341 RLSWGRSPSNKQSD 354
+ +S ++ +
Sbjct: 169 FVGHFKSRKEREEE 182
>gi|321461699|gb|EFX72729.1| hypothetical protein DAPPUDRAFT_308097 [Daphnia pulex]
Length = 336
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQ 133
SLWIG L+P+M E ++ F GE KV+RNK T G+GF +F A VL
Sbjct: 8 SLWIGGLEPYMTEEFLMRSFELMGEKPEAIKVMRNKHTGLPAGFGFCQFRDEKQAMEVLH 67
Query: 134 TFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVY 191
NG +P ++ F+LN +T G D ++VGDL+ADV DY L + F A Y
Sbjct: 68 KLNGKIIPYSQPPSRFKLNHSTNTKGST-----ADHALWVGDLSADVDDYGLYKCFSAKY 122
Query: 192 SSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRIGPA 244
+SV+ AKVV + G S+GY FV F +ES+ ++T M G + P+R+ A
Sbjct: 123 NSVQLAKVVRG-SNGESRGYAFVNFSNESDYKDALTHMQGHRGLGSNPLRVSLA 175
>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]
Length = 844
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 53/293 (18%)
Query: 104 KVIRNKQTNFSE--GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ 161
K++ Q + S YGF++++ A+A + T +G Q+ Q ++NWA Y +G+R +
Sbjct: 169 KIVVVFQASLSSLSSYGFVDYLDRASASLAIMTLHGRQVYG--QALKVNWA-YASGQR-E 224
Query: 162 DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESE 221
D F IFVGDL+ +VTD L F +V++S A+V+ D TGRSKGYGFV F ++ +
Sbjct: 225 DTSGHFNIFVGDLSPEVTDATLYACF-SVFASCSDARVMWDHKTGRSKGYGFVSFRNQQD 283
Query: 222 QLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN--------TQGSQG----- 268
++ +++G R +R ATK A + Q QN + GSQ
Sbjct: 284 AQSAINDLSGKWLGNRQIRCN-WATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEE 342
Query: 269 --ENDPNNTTIFVGGLDPSVTDDIL---------KTVFGQYGELV--------------- 302
EN+P TT++VG L +I+ +++F +L
Sbjct: 343 APENNPAYTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHAL 402
Query: 303 ------HVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPS 349
V+I K GFV++ A A+ + NG + G+S++ SWG P+
Sbjct: 403 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPT 455
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 55/224 (24%)
Query: 70 SDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAE 129
+ G ++++GDL P + ++ + + F +V+ + +T S+GYGF+ F + A+
Sbjct: 226 TSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQ 285
Query: 130 RVLQTFNGTQMPSTEQNFRLNWATYGAG-------------------------ERRQDDG 164
+ +G + + + R NWAT GAG E ++
Sbjct: 286 SAINDLSGKWLGN--RQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEA 343
Query: 165 PD-----FTIFVGDLAAD-VTDYVLQETFRAVYSSV----------------------KG 196
P+ T++VG+L+ + +T+ ++ F +V S+ G
Sbjct: 344 PENNPAYTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALG 403
Query: 197 AKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMR 240
A V+ + R KG+GFVR+ E ++ NG + + M+
Sbjct: 404 AGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMK 447
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 199 VVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKA 258
VV + YGFV + D + ++ ++G + +++ A A+GQ+
Sbjct: 172 VVFQASLSSLSSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAY----ASGQR---- 223
Query: 259 TYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP------AGKRC 312
E+ + IFVG L P VTD L F + ++ K
Sbjct: 224 ----------EDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGY 273
Query: 313 GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQ 355
GFV F N+ A+ A++ L+G LG + IR +W + D+
Sbjct: 274 GFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDK 316
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++G+L P + E+ + IF G S +V R+ T S GY ++ F + A + ++
Sbjct: 41 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGRQAIEK 100
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N T P Q R+ W+ R++ G IF+ +L AD+ + L +TF +V+ ++
Sbjct: 101 LNYT--PIKGQPCRIMWSQRDPSLRKKGSG---NIFIKNLHADIDNKALHDTF-SVFGNI 154
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
K+ TD TG SKG+GFV F + ++ +NG+L + + + + P ++K
Sbjct: 155 LSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEVYVAPHVSRK------ 208
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKR--- 311
+ Q E N T +++ + + + F + + V +
Sbjct: 209 -------DRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAPVTSVHLEKDSEGKL 261
Query: 312 --CGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
GFV + A +A+ LNG + GQ + + + +Q +
Sbjct: 262 RGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQE 306
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 140/301 (46%), Gaps = 17/301 (5%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S K+ ++ T S+G+GF+ F S
Sbjct: 120 PSLRKKGSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESD 179
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT-IFVGDLAADVTDYVLQ 184
AA + NG + E + + + ++ +FT +++ +++ + + +
Sbjct: 180 EAAREAIDAINGMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFE 239
Query: 185 ETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPA 244
E F+ V + V + D + G+ +G+GFV + + +++ E+NGV + + +G A
Sbjct: 240 EFFKKV-APVTSVHLEKD-SEGKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRA 297
Query: 245 ATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL 301
K + +QY+++ + + QG N +F+ LD S+ D+ L+ F +G +
Sbjct: 298 QKKYERQQELRRQYEQSKLEKMEKYQGVN------LFIKNLDDSIDDERLREEFSPFGTI 351
Query: 302 VHVKIPA-----GKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQA 356
VK+ K GFV F+ A +A++ N + G+ + ++ + ++S A
Sbjct: 352 TSVKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLA 411
Query: 357 Q 357
Q
Sbjct: 412 Q 412
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 116 GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGE--RRQDDGPDF------ 167
G+GF+ + +HA A + ++ NG + + + Y + RRQ +
Sbjct: 263 GFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQELRRQYEQSKLEKMEKY 322
Query: 168 ---TIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLR 224
+F+ +L + D L+E F + + ++ KV+T G+SKG+GFV F E +
Sbjct: 323 QGVNLFIKNLDDSIDDERLREEF-SPFGTITSVKVMTTEN-GKSKGFGFVCFSTPEEATK 380
Query: 225 SMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQN 262
++TE N + + +P+ + A K Q Q+ +N
Sbjct: 381 AITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 418
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 271 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRC------GFVQFANRTCAE 324
+ + +++VG LDP+V++ +L +F G + +++ +V F +
Sbjct: 36 ETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGR 95
Query: 325 QALSVLNGTQLGGQSIRLSWG-RSPSNKQ 352
QA+ LN T + GQ R+ W R PS ++
Sbjct: 96 QAIEKLNYTPIKGQPCRIMWSQRDPSLRK 124
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 27/285 (9%)
Query: 75 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQT 134
SL++GDL+ + +S + +F G+ VS +V R+ + S GY ++ + + A R ++
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 135 FNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSV 194
N P + R+ ++ RR IF+ +L + + L +TF A + ++
Sbjct: 183 LNFA--PLNNKPIRVMYSNRDPSSRRSGSA---NIFIKNLDKTIDNKTLHDTFSA-FGAI 236
Query: 195 KGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQ 254
KV D G+SKG+GFV++ E +M +NG+L + +P+ +GP +K
Sbjct: 237 LSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGP-FLRKQERDNS 294
Query: 255 YQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGEL----VHVKIPAGK 310
KA + N +FV L S T + L VF +YG + V + +
Sbjct: 295 SDKAKFNN--------------VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKS 340
Query: 311 RC-GFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSD 354
RC GFV F + A +A+ LNG ++ + + + S ++ D
Sbjct: 341 RCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSEREMD 385
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 145/307 (47%), Gaps = 27/307 (8%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P + G +++I +L ++ + F G +S KV + S+G+GF+++
Sbjct: 202 PSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKE 260
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFT----IFVGDLAADVTDY 181
+A+ +++ NG + N + + ++ +D+ D +FV +L+ T
Sbjct: 261 ESAQSAMKSLNGMLI-----NDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKE 315
Query: 182 VLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 241
L + F + Y ++ A VV G+S+ +GFV F + R++ E+NG + + +
Sbjct: 316 DLIKVF-SEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYV 373
Query: 242 GPAATK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQY 298
G A K + ++++++ QG+N +++ LD +TDD L+ +F +
Sbjct: 374 GRAQKKSEREMDLKRRFEQSMKDAADKYQGQN------LYLKNLDDGITDDQLRELFSNF 427
Query: 299 GELVHVKIP-----AGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQ 352
G++ KI K GFV F+ R A QAL+ +NG + G+ + +++ R K
Sbjct: 428 GKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKA 487
Query: 353 SDQAQWN 359
QAQ++
Sbjct: 488 MLQAQFS 494
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 156 AGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVR 215
AG Q P +++VGDL A+VTD L E F V +V D + RS GY +V
Sbjct: 111 AGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQA-GQVVSVRVCRDVNSRRSLGYAYVN 169
Query: 216 FGDESEQLRSMTEMNGVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNT 275
+ + + R+M +N + +P+R+ Y N S + N
Sbjct: 170 YSNPMDAARAMEALNFAPLNNKPIRV-----------------MYSNRDPSSRRSGSAN- 211
Query: 276 TIFVGGLDPSVTDDILKTVFGQYGELVHVKIPA-----GKRCGFVQFANRTCAEQALSVL 330
IF+ LD ++ + L F +G ++ K+ K GFVQ+ A+ A+ L
Sbjct: 212 -IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSL 270
Query: 331 NGTQLGGQSIRLS--WGRSPSNKQSDQAQWN 359
NG + + + + + + SD+A++N
Sbjct: 271 NGMLINDKPVYVGPFLRKQERDNSSDKAKFN 301
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 145/287 (50%), Gaps = 28/287 (9%)
Query: 52 VPPPSQQTQPYGVAPDASSDGI-RSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQ 110
V P + + P GV + + + SL++GDL+ + E+ + +F G+ VS +V R+
Sbjct: 6 VQPQAPVSAPNGVVSNGVNQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLT 65
Query: 111 TNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIF 170
+ S GYG++ + + A + ++ N T P + R+ ++ R+ G I+
Sbjct: 66 SRRSLGYGYVNYNNVHDAAQAIEVLNFT--PVNGKPIRIMYSYRDPTIRKSGTG---NIY 120
Query: 171 VGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMN 230
+ +L + + L +TF A + S+ KV TD + G+S GYGFV+F +E ++ ++N
Sbjct: 121 IKNLDKAIDNKALHDTFSA-FGSILSCKVATD-SLGQSLGYGFVQFDNEESAKNAIDKLN 178
Query: 231 GVLCSTRPMRIGPAATKKAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDI 290
G+L + + + +GP +K KAT+ N ++V L + T++
Sbjct: 179 GMLLNDKQVYVGP-FLRKQERESAIDKATFNN--------------VYVKNLSETTTEED 223
Query: 291 LKTVFGQYGEL---VHVKIPAGK-RC-GFVQFANRTCAEQALSVLNG 332
LK +FG+YG + V ++ GK RC GFV F N A Q++ LNG
Sbjct: 224 LKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAAQSVEALNG 270
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 139/303 (45%), Gaps = 19/303 (6%)
Query: 66 PDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSH 125
P G +++I +L ++ + F G +S KV + S GYGF++F +
Sbjct: 109 PTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQ-SLGYGFVQFDNE 167
Query: 126 AAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQE 185
+A+ + NG + + +Q + + E D ++V +L+ T+ L++
Sbjct: 168 ESAKNAIDKLNGMLL-NDKQVYVGPFLRKQERESAIDKATFNNVYVKNLSETTTEEDLKK 226
Query: 186 TFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIGPAA 245
F Y ++ A V+ D G+S+ +GFV F + + +S+ +NG + +G A
Sbjct: 227 IF-GEYGTITSAVVMRD-GNGKSRCFGFVNFENPDDAAQSVEALNGKTFDEKEWYVGKAQ 284
Query: 246 TK---KAATGQQYQKATYQNTQGSQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELV 302
K + ++++ + QG N ++V LD S+TDD LK +F ++G +
Sbjct: 285 KKSEREVELKGRFEQTLKETVDKFQGLN------LYVKNLDDSITDDKLKELFSEFGTIT 338
Query: 303 HVKI---PAG--KRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQSDQA 356
K+ P G + GFV F+ A +AL+ +NG + + + ++ R + QA
Sbjct: 339 SCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQA 398
Query: 357 QWN 359
Q++
Sbjct: 399 QYS 401
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 266 SQGENDPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIP---AGKRC---GFVQFAN 319
S G N T+++VG L+ +VT+ L +F Q+G++V +++ +R G+V + N
Sbjct: 20 SNGVNQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNN 79
Query: 320 RTCAEQALSVLNGTQLGGQSIRLSWG-RSPSNKQS 353
A QA+ VLN T + G+ IR+ + R P+ ++S
Sbjct: 80 VHDAAQAIEVLNFTPVNGKPIRIMYSYRDPTIRKS 114
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,378,267,054
Number of Sequences: 23463169
Number of extensions: 342201586
Number of successful extensions: 2666121
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16260
Number of HSP's successfully gapped in prelim test: 17692
Number of HSP's that attempted gapping in prelim test: 2044252
Number of HSP's gapped (non-prelim): 428291
length of query: 406
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 261
effective length of database: 8,957,035,862
effective search space: 2337786359982
effective search space used: 2337786359982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)