BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015469
(406 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04073|CTPA_SCEOB C-terminal processing peptidase, chloroplastic OS=Scenedesmus
obliquus GN=ctpA PE=1 SV=1
Length = 464
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/390 (51%), Positives = 271/390 (69%), Gaps = 13/390 (3%)
Query: 14 PSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMNTREETYMAIRKML 73
P+ A++ E LFLEAWR +DRAYVDK+FNGQSWF+ RE L+ EPM+ R +TY AIRK+L
Sbjct: 74 PAQAVTSEQLLFLEAWRAVDRAYVDKSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLL 133
Query: 74 ATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANR 133
A LDDPFTRFLEP + +LR GT G++TGVGL I Y GS +VV++ PGGPA +
Sbjct: 134 AVLDDPFTRFLEPSRLAALRRGTAGSVTGVGLEITY---DGGSGKDVVVLTPAPGGPAEK 190
Query: 134 AGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS-GA--EIRHLALTREKV 190
AG +GDVI+ +D T+ + + +YD ++ LQG S VE+ + + GA R L LTR+KV
Sbjct: 191 AGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQKV 250
Query: 191 SLNPVKSRLC-----VVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVL 245
++NPV C PG + ++GY++L +FN N + A ++A L V VL
Sbjct: 251 TINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVL 310
Query: 246 DLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKG 305
D+R+N GGLFP G+ +A++ +D+G +V I DS+G+RDIY DG +++ ++ PL VLVN+G
Sbjct: 311 DIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADG-NSIDSATPLVVLVNRG 369
Query: 306 TASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDK 365
TASASE+LAGALKD+KR ++ GE T+GKG IQ+V LSDGSG+AVTVARY+TPA DI+K
Sbjct: 370 TASASEVLAGALKDSKRGLIAGERTFGKGLIQTVVDLSDGSGVAVTVARYQTPAGVDINK 429
Query: 366 VGVIPDHPL-PKTFPKDEDGFCGCLQDSAS 394
+GV PD L P+ P D +G C L A+
Sbjct: 430 IGVSPDVQLDPEVLPTDLEGVCRVLGSDAA 459
>sp|P42784|CTPA_SYNP2 Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
Length = 414
Score = 332 bits (851), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/367 (47%), Positives = 247/367 (67%), Gaps = 20/367 (5%)
Query: 15 SLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMNTREETYMAIRKMLA 74
++A ++E L L+AWR + +AYVD+TFN Q+W+ R+ L+ P+ TR+E Y A+ +MLA
Sbjct: 27 AIAFTDEQDLLLQAWRYVSQAYVDETFNHQNWWLIRQKFLKR-PLKTRDEAYEAVGEMLA 85
Query: 75 TLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANRA 134
LDDP+TR L PE++ SL+ T G L+GVGL I D L VI +PG PA A
Sbjct: 86 LLDDPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVDV----LEVILPLPGSPAEAA 141
Query: 135 GILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAE--IRHLALTREKVSL 192
GI + D ILAID T ++G+ +AA R++G +GS V LTV+S +R + +TR+ ++L
Sbjct: 142 GIEAKDQILAIDGIDTRNIGLEEAAARMRGKKGSTVSLTVKSPKTDTVRTVKVTRDTIAL 201
Query: 193 NPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSG 252
NPV +L K+ ++GYI+L F+ NA + ++++ L+ + +VLDLR+N G
Sbjct: 202 NPVYDKL-----DEKNGEKVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPG 256
Query: 253 GLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDG---TDALAASEPLAVLVNKGTASA 309
GL GIEIA++WLD+ IVY + +G+ + Y G TDA PL VLVN+ TASA
Sbjct: 257 GLLQAGIEIARLWLDQETIVYTVNRQGIFESYSAVGQPLTDA-----PLVVLVNQATASA 311
Query: 310 SEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKVGVI 369
SEILAGAL+DN RA+L GE T+GKG IQS+F+L DG+G+AVTVA+YETP H DI+K+G++
Sbjct: 312 SEILAGALQDNGRAMLVGEKTFGKGLIQSLFELPDGAGMAVTVAKYETPLHHDINKLGIM 371
Query: 370 PDHPLPK 376
PD +P+
Sbjct: 372 PDEVVPQ 378
>sp|Q55669|CTPA_SYNY3 Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ctpA PE=3 SV=1
Length = 427
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 251/373 (67%), Gaps = 14/373 (3%)
Query: 2 LVTSTTIALSETPS-LALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMN 60
L+ I L TPS LA +EE +L L++WR ++++Y+D+TFN Q+W+ RE ++ P+
Sbjct: 15 LLMGALIYLGNTPSALAFTEEQKLLLQSWRLVNQSYLDETFNHQNWWLLREKYVKR-PLR 73
Query: 61 TREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGL 120
REETY AI +MLATLD+PFTR L PE++ +L+ T G L+GVGL I + + L
Sbjct: 74 NREETYTAIEEMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQINI----NPETNQL 129
Query: 121 VVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS-GAE 179
+++ + G PA AG+ D ILAID T+++ + +AA R++GP+ + V L + S G E
Sbjct: 130 EIMAPLAGSPAEEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVSLEILSAGTE 189
Query: 180 I-RHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSN 238
+ + LTR+ +SL+PV ++L PG+S +GYI+L+ F+ NA V A+ L
Sbjct: 190 VPQEFTLTRQLISLSPVAAQLDD-SRPGQS---VGYIRLSQFSANAYKEVAHALHQLEEQ 245
Query: 239 SVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGTDALAASEPL 298
+ ++LDLR+N GGL GI+IA++WL + IVY + +G ++ + +G A PL
Sbjct: 246 GADGYILDLRNNPGGLLQAGIDIARLWLPESTIVYTVNRQGTQESFTANGEAA--TDRPL 303
Query: 299 AVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETP 358
VLVN+GTASASEILAGAL+DN+RA L GE T+GKG IQS+F+LSDG+G+AVTVA+YETP
Sbjct: 304 VVLVNQGTASASEILAGALQDNQRATLVGEKTFGKGLIQSLFELSDGAGIAVTVAKYETP 363
Query: 359 AHTDIDKVGVIPD 371
H DI K+G++PD
Sbjct: 364 QHHDIHKLGIMPD 376
>sp|Q6GGY8|CTPAL_STAAR Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1432 PE=3 SV=1
Length = 496
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 164/316 (51%), Gaps = 16/316 (5%)
Query: 57 EPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGS 116
+ N+ + + AI M+ L DP++ +L E+ S G G G+G +
Sbjct: 92 KKQNSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ--- 148
Query: 117 SAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS 176
++V S M G PA RAGI DVI ++ S + + + + ++G E + V LTV+
Sbjct: 149 ---IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQR 205
Query: 177 GAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLR 236
G+E + + + REK+ + V+ K ++G I + F + SG +++A+
Sbjct: 206 GSEEKDVKIKREKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAH 256
Query: 237 SNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAAS 295
+ + VLDLR+N GGL E +++A I++DKG +V + + I ++ A
Sbjct: 257 KDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKD 316
Query: 296 EPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARY 355
+++LVN+G+ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++
Sbjct: 317 MDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKW 376
Query: 356 ETPAHTDIDKVGVIPD 371
TP I G+ PD
Sbjct: 377 LTPDGHYIHGKGIKPD 392
>sp|Q44879|CTPA_BARBK Carboxy-terminal-processing protease OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1
Length = 434
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 184/345 (53%), Gaps = 30/345 (8%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI ML +LD P + +++ EK +R T+G G+G+ + + + V+S +
Sbjct: 64 AINGMLLSLD-PHSSYMDAEKAKDMRDSTKGEFGGLGIEVTM------ENNLIKVVSPID 116
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTV-RSGAEI-RHLAL 185
PA +AG+L+GD I ID + +A ++++GP G+P+ LT+ R G + + +
Sbjct: 117 DTPAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMRGPAGTPITLTINRFGVDKPLDIKI 176
Query: 186 TREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRS----NSVN 241
R+ + + VK R+ IGY++L F + ++ AI ++S + +
Sbjct: 177 VRDIIKVKAVKYRV---------EGDIGYLRLIQFTEKTFSDLQAAIKDIQSKIPTDKLK 227
Query: 242 AFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGTDA----LAASEP 297
+VLDLR N GGL + I + +L+KG IV +RG R D DA L +P
Sbjct: 228 GYVLDLRLNPGGLLDQAISVTDAFLNKGEIV---STRG-RKQNDVMRFDAKLGDLTDEKP 283
Query: 298 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYET 357
+ VL+N G+ASASEI+AGAL+D++RA + G ++GKG +Q++ L + L +T A Y T
Sbjct: 284 IIVLINGGSASASEIVAGALQDHRRATIIGTQSFGKGSVQTIIPLGENGALRLTTALYYT 343
Query: 358 PAHTDIDKVGVIPDHPLPKTFPKDEDGFCGCLQDSASTCNMNGGQ 402
P+ T I +G+ PD + + P+ G+ L +S ++ G Q
Sbjct: 344 PSGTSIQGIGITPDIVVEQPLPEKYKGYDVTLGESELRGHIKGKQ 388
>sp|Q8NWR2|CTPAL_STAAW Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MW2) GN=MW1310 PE=3 SV=1
Length = 496
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 160/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEM------QKKNDQIMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V+ K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q6G9E1|CTPAL_STAAS Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1363 PE=3 SV=1
Length = 496
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 160/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEM------QKKNDQIMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V+ K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q2YXZ9|CTPAL_STAAB Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1
Length = 496
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 160/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEM------QKKNDQIMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V+ K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q7A5M9|CTPAL_STAAN Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
N315) GN=SA1253 PE=1 SV=1
Length = 496
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSV---------DYKKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ + A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q99U67|CTPAL_STAAM Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1
Length = 496
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSV---------DYKKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ + A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q5HG01|CTPAL_STAAC Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
COL) GN=SACOL1455 PE=3 SV=1
Length = 496
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
EK+ + V+ K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DKG +V + + I ++ A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGS 327
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GALKD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 367 GVIPD 371
G+ PD
Sbjct: 388 GIKPD 392
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 181/371 (48%), Gaps = 32/371 (8%)
Query: 2 LVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMNT 61
+ + TI +S S L+++ R + + I+ AY KT N + + N
Sbjct: 53 ITVAATIGISHKIS-GLTKDER---QEIKKIEYAY--KTLNNDYY----------KKQNA 96
Query: 62 REETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLV 121
+ + AI M+ L DP++ ++ ++ S G G+G + ++
Sbjct: 97 GKLSEAAIDGMVKELKDPYSEYMTKDETKSFNEDVSGDFVGIGAEM------QKKDKQIM 150
Query: 122 VISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIR 181
+ S M PA +AGI DV+ +D S + + ++G EG+ V+LT++ G++ +
Sbjct: 151 ITSPMKDSPAEKAGIQPKDVVTKVDGKSVVGKPLDQVVKLVRGKEGTTVKLTIKRGSQEK 210
Query: 182 HLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVN 241
+ + R K+ + V+ K IG + F N +G ++ AI + V
Sbjct: 211 EIKIKRGKIHVKSVEY---------KKKDNIGVFTINKFQDNTAGELKSAIIKAHKDGVR 261
Query: 242 AFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAV 300
+ VLDLR+N GGL E +++A I++DK +V + I ++ A +++
Sbjct: 262 SIVLDLRNNPGGLLDEAVKMANIFIDKDQTVVKLEKGDDTESIKTSNDASNEAKDMKVSI 321
Query: 301 LVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAH 360
LVN+G+ASASE+ GA++D+K+A ++G T+GKG +Q+ + DGS L T ++ TP
Sbjct: 322 LVNEGSASASEVFTGAMRDHKKAKVYGSKTFGKGIVQTTREFKDGSLLKYTQMKWLTPDG 381
Query: 361 TDIDKVGVIPD 371
+I G+ PD
Sbjct: 382 HNIHGKGIQPD 392
>sp|Q5HPB7|CTPAL_STAEQ Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1
Length = 491
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 179/372 (48%), Gaps = 32/372 (8%)
Query: 1 MLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMN 60
++ +TI +S S L++E R L+ YV +T N + + + L
Sbjct: 47 IITVVSTILISHQKS-GLNKEQRANLKKIE-----YVYQTLNKDYYKKQSSDKL------ 94
Query: 61 TREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGL 120
T AI M+ L DP++ ++ E+ G G G+G + + +
Sbjct: 95 ----TQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEM------QKKNEQI 144
Query: 121 VVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEI 180
V S M PA +AGI D++ ++ S + + ++G +G+ V LT++ G++
Sbjct: 145 SVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE 204
Query: 181 RHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSV 240
+ + + R+ + + V+ +G + + F N SG ++ AI +
Sbjct: 205 KDIKIKRDTIHVKSVEYE---------KKGNVGVLTINKFQSNTSGELKSAIIKAHKQGI 255
Query: 241 NAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLA 299
+LDLR+N GGL E +++A I++DKG +V + + ++ ++ A ++
Sbjct: 256 RHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVS 315
Query: 300 VLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPA 359
+LVN+G+ASASE+ GA+KD +A ++G T+GKG +Q++ + SDGS + T ++ TP
Sbjct: 316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTIREFSDGSLIKYTEMKWLTPD 375
Query: 360 HTDIDKVGVIPD 371
I G+ PD
Sbjct: 376 GHYIHGKGIRPD 387
>sp|Q8CSK8|CTPAL_STAES Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1113 PE=3 SV=1
Length = 491
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 32/372 (8%)
Query: 1 MLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMN 60
++ +TI +S S L++E R L+ YV +T N + + + L
Sbjct: 47 IITVVSTILISHQKS-GLNKEQRANLKKIE-----YVYQTLNKDYYKKQSSDKL------ 94
Query: 61 TREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGL 120
T AI M+ L DP++ ++ E+ G G G+G + + +
Sbjct: 95 ----TQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEM------QKKNEQI 144
Query: 121 VVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEI 180
V S M PA +AGI D++ ++ S + + ++G +G+ V LT++ G++
Sbjct: 145 SVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE 204
Query: 181 RHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSV 240
+ + + R+ + + V+ +G + + F N SG ++ AI +
Sbjct: 205 KDIKIKRDTIHVKSVEYE---------KKGNVGVLTINKFQSNTSGELKSAIIKAHKQGI 255
Query: 241 NAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLA 299
+LDLR+N GGL E +++A I++DKG +V + + ++ ++ A ++
Sbjct: 256 RHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVS 315
Query: 300 VLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPA 359
+LVN+G+ASASE+ GA+KD +A ++G T+GKG +Q+ + SDGS + T ++ TP
Sbjct: 316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPD 375
Query: 360 HTDIDKVGVIPD 371
I G+ PD
Sbjct: 376 GHYIHGKGIRPD 387
>sp|Q49XN1|CTPAL_STAS1 Probable CtpA-like serine protease OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1319 PE=3 SV=1
Length = 491
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 152/308 (49%), Gaps = 16/308 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI M+ LDDP++ ++ ++ S G G+G + + + S M
Sbjct: 98 AIDGMVKKLDDPYSDYMTKKETKSFNEDVSGDFVGIGAEM------QKKGNQIQITSPMK 151
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 187
PA +AGI DV+ ++ S + + ++++G +G+ V LT+ G + + + R
Sbjct: 152 QSPAEKAGIQPKDVVTKVNGKSIKGQPLEAIVKKVRGKQGTKVTLTIERGGQAHDITIKR 211
Query: 188 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 247
+K+ + V+ + +G + F + SG ++ AI + + VLDL
Sbjct: 212 DKIHVKSVEYQ---------KHGDVGVFTINKFQNSTSGELKSAIIKAHKDGIRKIVLDL 262
Query: 248 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 306
R+N GGL E +++A I++DK +V + + I ++ A +++LVNKG+
Sbjct: 263 RNNPGGLLDEAVKMANIFIDKNETVVQLEKGKHKEAIKASNDASKEAKDMDVSILVNKGS 322
Query: 307 ASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDKV 366
ASASE+ GA+KD +A ++G T+GKG +Q+ + DGS L T ++ TP I
Sbjct: 323 ASASEVFTGAMKDYNKAKVYGSKTFGKGIVQTTREFEDGSLLKFTNMKWLTPKSHYIHGK 382
Query: 367 GVIPDHPL 374
G+ PD +
Sbjct: 383 GITPDKKI 390
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 168/305 (55%), Gaps = 18/305 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI+ M+ +LDDP++ +++ E+ S + G+G + DG ++++S +
Sbjct: 71 AIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEGIGAQV---EEKDGE---ILIVSPIK 124
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTV-RSGAEIRHLALT 186
G PA +AGI D I+ ++ S + M + +A ++G +G+ V+L + R+G L++
Sbjct: 125 GSPAEKAGIKPRDQIIKVNGKSVKGMNVNEAVALIRGKKGTKVKLELNRAGVGNIDLSIK 184
Query: 187 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLD 246
R+ + + V S + IG I++TSF++ + + +AID+L ++LD
Sbjct: 185 RDTIPVETVYSEM--------KDNNIGEIQITSFSETTAKELTDAIDSLEKKGAKGYILD 236
Query: 247 LRDNSGGLFPEGIEIAKIWLDKGV-IVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKG 305
LR N GGL + I ++ +++DKG I+ + G +++ + + ++P VLVN G
Sbjct: 237 LRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKEVMKAEKERKV--TKPTVVLVNDG 294
Query: 306 TASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDIDK 365
TASA+EI+A AL ++ L GE T+GKG +Q+ + DGS + +TVA++ T I K
Sbjct: 295 TASAAEIMAAALHESSNVPLIGETTFGKGTVQTAKEYDDGSTVKLTVAKWLTADGEWIHK 354
Query: 366 VGVIP 370
G+ P
Sbjct: 355 KGIKP 359
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 16/306 (5%)
Query: 68 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 127
AI+ ML+TL+DP++ +++ + + G+G +G DG ++++S
Sbjct: 79 AIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGM---EDGK---IIIVSPFK 132
Query: 128 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLA--L 185
PA +AG+ D I++I+ S + A +++G +GS V + ++ + L+ +
Sbjct: 133 KSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRI 192
Query: 186 TREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVL 245
R ++ L V + V G +GYI +++F+++ + +A+ L + V+
Sbjct: 193 KRAEIPLETVFASEKKVQGHS-----VGYIAISTFSEHTAEDFAKALRELEKKEIEGLVI 247
Query: 246 DLRDNSGGLFPEGIEIAKIWLDKGV-IVYICDSRGVRDIYDTDGTDALAASEPLAVLVNK 304
D+R N GG EI K ++ K + I + G + Y + T A P+ V+ +K
Sbjct: 248 DVRGNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAY--PVNVITDK 305
Query: 305 GTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYETPAHTDID 364
G+ASASEILAGALK+ + G+ ++GKG +Q + DGS + +T+ ++ TP I
Sbjct: 306 GSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIH 365
Query: 365 KVGVIP 370
K G+ P
Sbjct: 366 KKGIEP 371
>sp|P43669|PRC_SALTY Tail-specific protease OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=prc PE=3 SV=2
Length = 682
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 48 RYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSI 107
RY+ A+R E+ + A DP T +L P + +L G+G +
Sbjct: 194 RYK-FAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVL 252
Query: 108 GYPTASDGSSAGLVVISSMPGGPANRAGILS-GDVILAIDDTSTESMGIY-----DAAER 161
D + V+ S + GGPA ++ +S GD I+ + + + D
Sbjct: 253 ---QMDDDYT---VINSLVAGGPAAKSKSISVGDRIVGVGQAGKPMVDVIGWRLDDVVAL 306
Query: 162 LQGPEGSPVELTVR---SGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLT 218
++GP+GS V L + G + R + LTRE++ L ++ V GK ++G + +
Sbjct: 307 IKGPKGSKVRLEILPAGKGTKTRIITLTRERIRLEDRAVKMSV-KTVGKE--KVGVLDIP 363
Query: 219 SFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSR 278
F + V+ + L +VN+ V+DLR N GG E + ++ +++ G IV + D+
Sbjct: 364 GFYVGLTDDVKVQLQKLEKQNVNSIVIDLRSNGGGALTEAVSLSGLFIPSGPIVQVRDNN 423
Query: 279 G-VRDIYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQ 337
G VR+ DTDG + PL VLV++ +ASASEI A A++D RA++ GEPT+GKG +Q
Sbjct: 424 GKVREDSDTDGV--VYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTVQ 481
Query: 338 SVFQLS 343
L+
Sbjct: 482 QYRSLN 487
>sp|P23865|PRC_ECOLI Tail-specific protease OS=Escherichia coli (strain K12) GN=prc PE=1
SV=2
Length = 682
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 24/307 (7%)
Query: 48 RYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSI 107
RY+ A+R E+ + A DP T +L P + +L G+G +
Sbjct: 194 RYK-FAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVL 252
Query: 108 GYPTASDGSSAGLVVISSM-PGGPANRAGILS-GDVILAIDDTSTESMGIY-----DAAE 160
VI+SM GGPA ++ +S GD I+ + T + + D
Sbjct: 253 QM-------DDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVA 305
Query: 161 RLQGPEGSPVELTVR---SGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKL 217
++GP+GS V L + G + R + LTRE++ L ++ V GK ++G + +
Sbjct: 306 LIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSV-KTVGKE--KVGVLDI 362
Query: 218 TSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDS 277
F + V+ + L +V++ ++DLR N GG E + ++ +++ G IV + D+
Sbjct: 363 PGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDN 422
Query: 278 RG-VRDIYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKI 336
G VR+ DTDG + PL VLV++ +ASASEI A A++D RA++ GEPT+GKG +
Sbjct: 423 NGKVREDSDTDGQ--VFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTV 480
Query: 337 QSVFQLS 343
Q L+
Sbjct: 481 QQYRSLN 487
>sp|P45306|PRC_HAEIN Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=prc PE=3 SV=1
Length = 695
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 20/270 (7%)
Query: 78 DPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANRAGIL 137
DP T +L P S +L G+G T + + S +PG PA R+ L
Sbjct: 231 DPHTSYLSPRTAKSFNESINLSLEGIG------TTLQSEDDEISIKSLVPGAPAERSKKL 284
Query: 138 S-GDVILAI-----DDTSTESMGIYDAAERLQGPEGSPVELTVR--SGAEIRHLALTREK 189
GD I+ + D + D E+++G +G+ V L + G + R + L R+K
Sbjct: 285 HPGDKIIGVGQATGDIEDVVGWRLEDLVEKIKGKKGTKVRLEIEPAKGGKSRIITLVRDK 344
Query: 190 VSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDLRD 249
V + ++L GK+ I IK+ SF + V++ + L + A ++DLR+
Sbjct: 345 VRIEDQAAKLTFEKVSGKN---IAVIKIPSFYIGLTEDVKKLLVKLENQKAEALIVDLRE 401
Query: 250 NSGGLFPEGIEIAKIWLDKGVIVYICDS-RGVRDIYDTDGTDALAASEPLAVLVNKGTAS 308
N GG E + ++ +++ G +V + D+ + +R D D T L V++N+ +AS
Sbjct: 402 NGGGALTEAVALSGLFITDGPVVQVRDAYQRIRVHEDDDATQQYKG--LLFVMINRYSAS 459
Query: 309 ASEILAGALKDNKRAVLFGEPTYGKGKIQS 338
ASEI A A++D +R ++ G+ T+GKG +Q
Sbjct: 460 ASEIFAAAMQDYRRGIIIGQNTFGKGTVQQ 489
>sp|Q7SZI7|RET3_XENLA Retinol-binding protein 3 OS=Xenopus laevis GN=rbp3 PE=1 SV=1
Length = 1219
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 26/170 (15%)
Query: 198 RLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAID----TLRSNSV---NAFVLDLRDN 250
++ V+PG +GY++ F+ A + +AI +L N + N+ ++D+R N
Sbjct: 714 KIEVLPG------NVGYLR---FDMMADTEIIKAIGPQLVSLVWNKLVETNSLIIDMRYN 764
Query: 251 SGGLFPEGIEIAKIW------LDKGVIVYICDSRGVRDIYDTDGT--DALAASEPLAVLV 302
+GG + I I + L VY + +DI+ + +++ + +L
Sbjct: 765 TGG-YSTAIPIFCSYFFDPEPLQHLYTVYDRSTSTGKDIWTLPEVFGERYGSTKDIYILT 823
Query: 303 NKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTV 352
+ T SA+E+ +LKD RA L GEPT G ++++ D S L VT+
Sbjct: 824 SHMTGSAAEVFTRSLKDLNRATLIGEPTSGVSLSVGMYKVGD-SNLYVTI 872
>sp|Q8NI35|INADL_HUMAN InaD-like protein OS=Homo sapiens GN=INADL PE=1 SV=3
Length = 1801
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 107 IGYP-TASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAAERLQG 164
+GY T+ G ++G+ V S +PG A G I D I+A+D + + +D E L
Sbjct: 381 VGYVGTSHTGEASGIYVKSIIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL-- 438
Query: 165 PEGSPVELTVRSGAEIRHLALTREKVS-----LNPVKSRLCVVPGPGKSSPRIGYIKLTS 219
R+ ++ HL L R K S L P R VV P K P +
Sbjct: 439 ----------RNAGQVVHLTLVRRKTSSSTSPLEPPSDRGTVVE-PLK-PPALFLTGAVE 486
Query: 220 FNQNASG---AVREAIDTLRSNSVNAF 243
N G ++E IDTL+++++ A
Sbjct: 487 TETNVDGEDEEIKERIDTLKNDNIQAL 513
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 115 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQ 163
G ++G+VV + +PGG A+R G L +GD IL I T+ + M A+ L+
Sbjct: 265 GKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 314
>sp|Q63ZW7|INADL_MOUSE InaD-like protein OS=Mus musculus GN=Inadl PE=1 SV=2
Length = 1834
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 107 IGYP-TASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAAERLQG 164
+GY TA G ++G+ V S +PG A G I D I+A+D + + D E L
Sbjct: 381 VGYVGTAHPGEASGIYVKSIIPGSAAYHNGQIQVNDKIVAVDGVNIQGFANQDVVEVL-- 438
Query: 165 PEGSPVELTVRSGAEIRHLALTREKVSL--NPVK--SRLCVVPGPGKSSPRIGYIKLTSF 220
R+ ++ HL L R K SL +P + S V P K R G K +
Sbjct: 439 ----------RNAGQVVHLTLVRRKTSLSASPFEHSSSRETVAEPPKVPERAGSPKPEAN 488
Query: 221 NQNASGAVREAIDTLRSNSVNAF 243
+ + E +D L++N+V A
Sbjct: 489 LSVEAEEIGERLDNLKNNTVQAL 511
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 115 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQ 163
G S+G+VV + +PGG A+R G L +GD IL I T+ + M A+ L+
Sbjct: 265 GKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 314
>sp|Q86UT5|NHRF4_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF4 OS=Homo sapiens
GN=PDZD3 PE=1 SV=2
Length = 571
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 127 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 186
PG PA +AG+ +GD ++A+ S E +G + R+QG +GS V LTV R ++
Sbjct: 362 PGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG-QGSCVSLTVVDPEADRFFSMV 420
Query: 187 R 187
R
Sbjct: 421 R 421
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 102 GVGLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAER 161
G G S G+ + S L + PGG A RAG+ GDVIL ++ +G + ER
Sbjct: 473 GPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEVNGY---PVGGQNDLER 529
Query: 162 LQG-PEGSP---VELTVRS 176
LQ PE P ++L RS
Sbjct: 530 LQQLPEAEPPLCLKLAARS 548
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 104 GLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
G S G+ + AG VV PG A R G+ GD ILA+++ E R++
Sbjct: 123 GKSFGFHLQQELGRAGHVVCRVDPGTSAQRQGLQEGDRILAVNNDVVEHEDYAVVVRRIR 182
Query: 164 GPEGSP-VELTVRSGAEIRHLA-LTREKVSLNPVKSRLCVVPGPGKSSPRIGYI 215
SP V LTV + RH + R ++ + + LC GPG PR+ +I
Sbjct: 183 A--SSPRVLLTVLA----RHAHDVARAQLGED---AHLCPTLGPG-VRPRLCHI 226
>sp|D4ACE5|INTU_RAT Protein inturned OS=Rattus norvegicus GN=Intu PE=3 SV=1
Length = 942
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 81 TRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAG-------LVVISSMPGGPANR 133
T ++ P+K ++++ Q L V + + + T +G LVV +PGG A +
Sbjct: 166 TVYINPKKLTAIKAREQAKLLEVLVGVIHQTKWSWKRSGKQADGERLVVHGLVPGGSAMK 225
Query: 134 AG-ILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIR 181
+G +L GDV++A++D S I + GP V+LT + ++
Sbjct: 226 SGQVLVGDVLVAVNDVDVTSENIERVLSCIPGP--MQVKLTFENAYAVK 272
>sp|Q66HS7|PDLI3_RAT PDZ and LIM domain protein 3 OS=Rattus norvegicus GN=Pdlim3 PE=1
SV=2
Length = 362
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAEAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q3SYZ8|PDLI3_BOVIN PDZ and LIM domain protein 3 OS=Bos taurus GN=PDLIM3 PE=2 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|O70209|PDLI3_MOUSE PDZ and LIM domain protein 3 OS=Mus musculus GN=Pdlim3 PE=1 SV=1
Length = 316
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q53GG5|PDLI3_HUMAN PDZ and LIM domain protein 3 OS=Homo sapiens GN=PDLIM3 PE=1 SV=1
Length = 364
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q6QGC0|PDLI3_PIG PDZ and LIM domain protein 3 OS=Sus scrofa GN=PDLIM3 PE=2 SV=1
Length = 365
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
L++ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LIITRITPGSKAAAANLCPGDVILAIDGYGTESMTHADAQDRIK 70
>sp|P12661|RET3_BOVIN Retinol-binding protein 3 OS=Bos taurus GN=RBP3 PE=1 SV=1
Length = 1286
Score = 38.5 bits (88), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 298 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYET 357
L VLV+ + SA+E A ++D +RA + GEPT G ++Q+ + A +
Sbjct: 838 LYVLVSHTSGSAAEAFAHTMQDLQRATIIGEPTAGGALSVGIYQVGSSALYASMPTQMAM 897
Query: 358 PAHTD--IDKVGVIPDHPLPKTFPKDEDGFCGCLQDSASTCNMNGGQLFA 405
A T D GV PD +P + L+ T G+L A
Sbjct: 898 SASTGEAWDLAGVEPDITVPMSVALSTARDIVTLRAKVPTVLQTAGKLVA 947
>sp|O84866|Y858_CHLTR Protein CT_858 OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=CT_858 PE=1 SV=2
Length = 601
Score = 38.5 bits (88), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 295 SEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAV---- 350
S+P+ VL+N+ S ++ LKDN RA++ G T G G Q + +G+
Sbjct: 478 SKPICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAGGFVFNVQFPNRTGIKTCSLT 537
Query: 351 -TVARYETPAHTDIDKVGVIPDHPLPKT 377
++A E A I+ +GV P LP T
Sbjct: 538 GSLAVREHGAF--IENIGVEPHIDLPFT 563
>sp|Q9PU47|PDLI3_CHICK PDZ and LIM domain protein 3 OS=Gallus gallus GN=PDLIM3 PE=1 SV=1
Length = 315
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQG 164
L++ PG A+ A + GD+I+AI+ STE+M DA ER++
Sbjct: 27 LIITRITPGSKASTANLCPGDIIVAINGLSTENMTHNDAQERIKA 71
>sp|Q059U7|INTU_MOUSE Protein inturned OS=Mus musculus GN=Intu PE=1 SV=1
Length = 942
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 81 TRFLEPEKFNSLRSGTQGALTGVGLSIGYPT-------ASDGSSAGLVVISSMPGGPANR 133
T ++ P K ++++ Q L V + I + T A LVV +PGG A +
Sbjct: 166 TVYINPRKLTAIKAREQVKLLEVLVGIIHQTKRSWKRSAKQADGERLVVHGLLPGGSAMK 225
Query: 134 AG-ILSGDVILAIDDTSTESMGIYDAAERLQGP 165
+G +L GDV++A++D S I + GP
Sbjct: 226 SGQVLVGDVLVAVNDVDVTSENIERVLSCIPGP 258
>sp|Q9ULD6|INTU_HUMAN Protein inturned OS=Homo sapiens GN=INTU PE=2 SV=2
Length = 942
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 83 FLEPEKFNSLRSGTQGALTGVGLSIGYPTA-------SDGSSAGLVVISSMPGGPANRAG 135
++ P+K +++ Q L V + I + T G LVV +PGG A ++G
Sbjct: 164 YVNPKKLTVIKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGDGERLVVHGLLPGGSAMKSG 223
Query: 136 -ILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIR 181
+L GDV++A++D + I + GP V+LT + +++
Sbjct: 224 QVLIGDVLVAVNDVDVTTENIERVLSCIPGP--MQVKLTFENAYDVK 268
>sp|P72780|HHOA_SYNY3 Putative serine protease HhoA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoA PE=1 SV=1
Length = 394
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 119 GLVVISSMPGGPANRAGILSGDVILAIDDT 148
G++V+ +PG PA RAGI GDVI+A+D T
Sbjct: 319 GILVMRVLPGTPAERAGIRRGDVIVAVDGT 348
>sp|Q9PL60|Y248_CHLMU Uncharacterized protein TC_0248 OS=Chlamydia muridarum (strain MoPn
/ Nigg) GN=TC_0248 PE=3 SV=1
Length = 601
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 295 SEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGL--AVTV 352
++P+ VL+N+ S ++ LKDN RA++ G T G G Q + +G+
Sbjct: 478 TKPICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLT 537
Query: 353 ARYETPAHTD-IDKVGVIPDHPLPKT 377
H D I+ VGV P +P T
Sbjct: 538 GSLAVREHGDLIENVGVEPHIEIPFT 563
>sp|Q9RDE2|TRI1_STRCO Tricorn protease homolog 1 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=tri1 PE=1 SV=1
Length = 1067
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 140/350 (40%), Gaps = 49/350 (14%)
Query: 19 SEENRLFLEAWRTIDRAYVDKTFNGQSWF----RYRENALRNEPMNTREETYMAIRKMLA 74
+E ++F E R + Y NG W RYR P+ R T+ + +L
Sbjct: 678 AEWRQMFDETGRIMRDHYWRADMNGVDWDGVLDRYR-------PVLDRVATHDDLVDLLW 730
Query: 75 TLDDPF---TRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPA 131
+ ++ P + SG + L G LS DG+ V+ S P
Sbjct: 731 EVHGELGTSHAYVTPRGGHG--SGARQGLLGADLS----RHEDGAWRIDRVLPSETSDPD 784
Query: 132 NRA-------GILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTV--RSGAEIRH 182
R+ + +GD I+A+ + + + L G G PVELTV G E+RH
Sbjct: 785 ARSPLAAPGVAVRAGDAIVAVAGQAVDP--VTGPGPLLVGTAGKPVELTVSPSGGGEVRH 842
Query: 183 LALTREKVSLNPVKSRLCVVPGPG----KSSPRIGYIKLTSFNQNASGAVREAIDTLRSN 238
A+ P++ V KS R+GY+ + + A G + D
Sbjct: 843 -AVVVPLADEEPLRYHAWVADRRAYVHEKSGGRLGYLHVP--DMQAPGWAQIHRDLRVEV 899
Query: 239 SVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDI-YDTDGTDALAASEP 297
+ V+D+R+N GG + + + K L + ++ + RG+R Y D A P
Sbjct: 900 AREGLVVDVRENRGGHTSQ-LVVEK--LARRIVGWDL-PRGMRPTSYPQD-----APRGP 950
Query: 298 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG-KIQSVFQLSDGS 346
+ + N+ + S +I+ A+K + G T+G I S ++L DG+
Sbjct: 951 VVAVANEFSGSDGDIVNAAIKALGIGPVVGVRTWGGVIGIDSRYRLVDGT 1000
>sp|P23648|NSR_LACLL Nisin-resistance protein OS=Lactococcus lactis subsp. lactis GN=nsr
PE=4 SV=1
Length = 318
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 234 TLRSNSVNAFVLDLRDNSGG-LFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGT--- 289
+L N+ N ++DLR N GG L P + ++ + D + Y+ S + + +G
Sbjct: 149 SLHKNNYNGVIVDLRGNRGGDLSPMVLGLSPLLPDGTLFTYVDKSSHSKPVELQNGEINS 208
Query: 290 ---------DALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVF 340
+ P+AVL++ T S+ E+ A + G + G
Sbjct: 209 GGSSTKISDNKKIKKAPIAVLIDNNTGSSGELTALCFEGIPNVKFLGSDSAGYTSANQTV 268
Query: 341 QLSDGSGLAVTVA 353
L DGS L +T A
Sbjct: 269 YLYDGSTLQITSA 281
>sp|Q9Z6P3|Y1016_CHLPN Protein CPn_1016/CP_0837/CPj1016/CpB1054 OS=Chlamydia pneumoniae
GN=CPn_1016 PE=3 SV=2
Length = 619
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 295 SEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLS 343
++PL +L+++ S ++ LKDN RA L G+PT G G VFQ++
Sbjct: 479 TKPLFMLIDEDDFSCGDLAPAILKDNGRATLIGKPTAGAGGF--VFQVT 525
>sp|Q6GLJ6|PDLI3_XENLA PDZ and LIM domain protein 3 OS=Xenopus laevis GN=pdlim3 PE=2 SV=1
Length = 358
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 120 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQG 164
LV+ PG ++ A + GDVILAID STE+M +A +R++
Sbjct: 27 LVISRITPGSKSSVANLCPGDVILAIDGFSTETMTHAEAQDRIKA 71
>sp|F1MDL2|INTU_BOVIN Protein inturned OS=Bos taurus GN=INTU PE=3 SV=2
Length = 933
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 83 FLEPEKFNSLRSGTQGALTGVGLSIGYPT-------ASDGSSAGLVVISSMPGGPANRAG 135
++ P+K ++ Q L V + I + T G LVV +PGG A ++G
Sbjct: 165 YVNPKKLTVTKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGGGERLVVHGLLPGGSAMKSG 224
Query: 136 -ILSGDVILAIDDTSTESMGIYDAAERLQGP 165
+L GDV++A++D S I + GP
Sbjct: 225 QVLIGDVLVAVNDVEVTSENIERVLSCIPGP 255
>sp|Q9PL97|DEGPL_CHLMU Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=htrA PE=3 SV=1
Length = 497
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 112 ASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVE 171
ASD + G+ V+S G PA AG++ G +ILA++ S + + + L+ +G V
Sbjct: 424 ASD--TRGIFVVSVEAGSPAASAGVVPGQLILAVNRQRVSS--VEELNQVLKNAKGENVL 479
Query: 172 LTVRSGAEIRHLALTREK 189
L V G IR + L ++
Sbjct: 480 LMVSQGEVIRFVVLKSDE 497
>sp|P73940|HHOB_SYNY3 Putative serine protease HhoB OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoB PE=1 SV=1
Length = 416
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 119 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPE-GSPVELTVRSG 177
G+++I PG PA +AG+ GD+IL + ++ D ER++ + G P+ + V+ G
Sbjct: 340 GVLIIQVSPGSPAAQAGLAPGDIILEVGGMGVKTA--TDVQERVEVSQIGEPLAIAVKRG 397
Query: 178 AEIRHLAL 185
+ + +A+
Sbjct: 398 QKPQMMAV 405
>sp|O75970|MPDZ_HUMAN Multiple PDZ domain protein OS=Homo sapiens GN=MPDZ PE=1 SV=2
Length = 2070
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 102 GVGLSI-GYPTASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAA 159
G+G SI Y D +S +++ S +PGG A + G +L GD ++ ++D + E+ + +A
Sbjct: 709 GLGFSILDYQDPIDPASTVIIIRSLVPGGIAEKDGRLLPGDRLMFVNDVNLENSSLEEAV 768
Query: 160 ERLQG-PEGSPVELTVRSG 177
E L+G P G TVR G
Sbjct: 769 EALKGAPSG-----TVRIG 782
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 115 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELT 173
G + G++V + +PGG A++ G L SGD IL I DT M A+ L+ G+ V+L
Sbjct: 274 GKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQC-GNRVKLM 332
Query: 174 VRSGA 178
+ GA
Sbjct: 333 IARGA 337
>sp|O95049|ZO3_HUMAN Tight junction protein ZO-3 OS=Homo sapiens GN=TJP3 PE=1 SV=2
Length = 933
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 104 GLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 163
G SIG A G+ G+ V G PA+ GI GD IL ++D +++ +A + L
Sbjct: 403 GKSIGLRLAG-GNDVGIFVSGVQAGSPADGQGIQEGDQILQVNDVPFQNLTREEAVQFLL 461
Query: 164 G-PEGSPVELTVRSGAEI 180
G P G +EL + +I
Sbjct: 462 GLPPGEEMELVTQRKQDI 479
>sp|A1SMX2|GCP_NOCSJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Nocardioides sp. (strain BAA-499 / JS614) GN=gcp PE=3
SV=1
Length = 348
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 218 TSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDS 277
TS ++ G VR TL +++V + V D GG+ PE A + I C++
Sbjct: 12 TSCDETGVGIVRG--HTLLADAVASSV-DEHARFGGVVPEVASRAHLEAMVPTIERACET 68
Query: 278 RGVRDIYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQ 337
G+R +YD D A+ V G A ++ G AV G+P YG +
Sbjct: 69 AGIR-LYDVD-----------AIAVTSGPGLAGALMVGVAAAKALAVGLGKPIYGVNHLA 116
Query: 338 ---SVFQLSDG 345
+V QL G
Sbjct: 117 AHVAVDQLEHG 127
>sp|Q3TJD7|PDLI7_MOUSE PDZ and LIM domain protein 7 OS=Mus musculus GN=Pdlim7 PE=2 SV=1
Length = 457
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 127 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 186
PGG A +AG+ GD +L ID + S+ +A + +R+ E L L+
Sbjct: 35 PGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNK------------IRACGERLSLGLS 82
Query: 187 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNAS--GAVREAIDTLRSN 238
R + PV+S+ P PR + S N+ A GA TLR N
Sbjct: 83 RAQ----PVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQN 132
>sp|P49194|RET3_MOUSE Retinol-binding protein 3 OS=Mus musculus GN=Rbp3 PE=2 SV=3
Length = 1234
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 298 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKGKIQSVFQLSDGSGLAVTVARYET 357
L +L++ + SA+E A ++D +RA + GEPT G ++Q+ + A +
Sbjct: 838 LYILMSHTSGSAAEAFAHTMQDLQRATVIGEPTAGGALSVGIYQVGNSPLYASMPTQMAL 897
Query: 358 PAHTD--IDKVGVIPDHPLPKTFPKDEDGFCGCLQDSASTCNMNGGQLFA 405
A T D GV PD +P + L+ T G+L A
Sbjct: 898 SASTGEAWDLAGVEPDITVPMSEALSTAQDIVVLRAKVPTVLQTAGKLVA 947
>sp|Q9NR12|PDLI7_HUMAN PDZ and LIM domain protein 7 OS=Homo sapiens GN=PDLIM7 PE=1 SV=1
Length = 457
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 127 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 186
PGG A +AG+ GD +L+ID + S+ +A + +R+ E L L+
Sbjct: 35 PGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNK------------IRACGERLSLGLS 82
Query: 187 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNA 224
R + PV+S+ P PR + S N+ A
Sbjct: 83 RAQ----PVQSKPQKASAPAADPPRYTFAPSVSLNKTA 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,467,149
Number of Sequences: 539616
Number of extensions: 6856651
Number of successful extensions: 17855
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 17660
Number of HSP's gapped (non-prelim): 248
length of query: 406
length of database: 191,569,459
effective HSP length: 120
effective length of query: 286
effective length of database: 126,815,539
effective search space: 36269244154
effective search space used: 36269244154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)