Query 015471
Match_columns 406
No_of_seqs 288 out of 1239
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 13:12:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 6E-25 2.1E-29 213.9 15.0 193 135-354 11-215 (280)
2 1xhb_A Polypeptide N-acetylgal 92.9 2.9 9.8E-05 41.9 16.3 166 176-348 62-252 (472)
3 2d7i_A Polypeptide N-acetylgal 90.2 11 0.00039 38.9 17.7 163 177-346 146-330 (570)
4 2ffu_A Ppgalnact-2, polypeptid 89.1 13 0.00043 37.6 16.8 161 176-347 99-283 (501)
5 3bcv_A Putative glycosyltransf 88.4 13 0.00043 32.8 14.6 165 175-349 34-220 (240)
6 1qg8_A Protein (spore coat pol 88.1 14 0.00047 32.9 17.3 118 223-348 77-208 (255)
7 4fix_A UDP-galactofuranosyl tr 86.3 20 0.00067 38.1 16.8 125 224-350 258-413 (657)
8 2z86_A Chondroitin synthase; G 83.6 27 0.00092 36.0 16.0 126 225-351 165-327 (625)
9 2z86_A Chondroitin synthase; G 71.7 68 0.0023 32.9 14.8 156 175-348 404-566 (625)
10 4hg6_A Cellulose synthase subu 70.6 1.2E+02 0.004 32.8 16.9 128 225-355 229-369 (802)
11 2z5i_A TM, general control pro 37.6 39 0.0013 24.0 4.0 26 86-111 8-33 (52)
12 2bo4_A Mannosylglycerate synth 35.3 1.9E+02 0.0065 28.6 10.1 164 176-346 29-209 (397)
13 2lnd_A De novo designed protei 34.6 66 0.0023 25.2 5.2 74 143-231 31-104 (112)
14 2c0n_A A197; thermophil protei 33.7 2.7E+02 0.0093 25.2 11.8 145 178-338 3-158 (203)
15 2pnv_A Small conductance calci 29.3 50 0.0017 22.6 3.2 30 79-111 8-37 (43)
16 2akf_A Coronin-1A; coiled coil 24.3 99 0.0034 19.4 3.6 25 84-108 7-31 (32)
17 1fo8_A Alpha-1,3-mannosyl-glyc 24.0 1.7E+02 0.0059 28.3 7.4 86 224-319 89-179 (343)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.92 E-value=6e-25 Score=213.92 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=131.6
Q ss_pred CCeeEEEEEeCCCC-CHHHHHHHHHHhccCCcccccccccCCeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeecc-
Q 015471 135 RKYLMVVGINSAFS-SRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHV- 212 (406)
Q Consensus 135 ~~~~llI~V~S~p~-~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~- 212 (406)
..-.|+|+|+|+++ +.+|+.+||+||++.+.. .+|+.+... + ..+... ..+++++.++.
T Consensus 11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~~fifsd~~--d----~~l~~~--~~~~~~~~~~~~ 71 (280)
T 2j0a_A 11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------QTFIFTDSP--D----ERLQER--LGPHLVVTQCSA 71 (280)
T ss_dssp CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------GEEEEESSC--C----HHHHHH--HGGGEEECCC--
T ss_pred CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------ceEEEcCCC--c----cccccc--ccccceeccccc
Confidence 34678899999998 557889999999987531 124333322 1 123222 35678887764
Q ss_pred -ccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcCCCCceEEEEeccCcccccCCCccccCccccc
Q 015471 213 -EGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKPRVYIGCMKSGPVLAQKGVRYHEPEYWKF 291 (406)
Q Consensus 213 -DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~~~~~ly~G~~~~~pv~r~~~~Kwyvp~~~~f 291 (406)
+++.+|+.|+...+.+.. +++++||+|+|||||||+++|+++|..+++.+++|+|......+++ .++++|...+
T Consensus 72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~- 146 (280)
T 2j0a_A 72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT- 146 (280)
T ss_dssp -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc-
Confidence 467889999999998764 3699999999999999999999999999999999999975432322 2445554322
Q ss_pred CCCCCccCCCc-CCCceeecHHHHHHHHHhcccc-------CCCCcchHHHHHHHh-cCCCeeeCCCCcccC
Q 015471 292 GEEGNKYFRHA-TGQLYAISKDLASYISINQHVL-------HKFANEDVSLGSWFI-GLDAEHIDDRRLCCG 354 (406)
Q Consensus 292 g~~~~~YP~Y~-~G~gYvlS~dla~~I~~~s~~l-------~~~~~EDV~lG~~l~-gl~v~~~d~~~f~~~ 354 (406)
+...| +|| +|+|||||++++++|+...... .....||+++|+|+. .+||...+...|+..
T Consensus 147 --~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~ 215 (280)
T 2j0a_A 147 --KLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSH 215 (280)
T ss_dssp ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCS
T ss_pred --ccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCC
Confidence 22345 466 6789999999999999754322 223469999999998 999999999888753
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=92.93 E-value=2.9 Score=41.91 Aligned_cols=166 Identities=16% Similarity=0.120 Sum_probs=87.1
Q ss_pred eEEEEEeecCCCCCCchHHHHHHHHhhcC-CEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHH
Q 015471 176 IVMRFVIGHSATSGGILDRAIEAEDKKHG-DFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGA 254 (406)
Q Consensus 176 i~v~FvlG~s~~~~~~~~~~L~~E~~~~~-DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~ 254 (406)
..++.|-..|. ++.....|++-.+.+. .+..+...+.. - .-.+...+.+.-..+|++..|+|+.+.++-|..
T Consensus 62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~---G--~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS---G--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC---C--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCC---C--hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 34555554443 2224445555455666 46555544332 1 223344444445789999999999999888877
Q ss_pred HHHhcCCCCce-EEEEec--c-CcccccC-------CCccccCcccc-c---------CC-CCCccCCCcCCCceeecHH
Q 015471 255 TLARHRSKPRV-YIGCMK--S-GPVLAQK-------GVRYHEPEYWK-F---------GE-EGNKYFRHATGQLYAISKD 312 (406)
Q Consensus 255 ~L~~~~~~~~l-y~G~~~--~-~pv~r~~-------~~Kwyvp~~~~-f---------g~-~~~~YP~Y~~G~gYvlS~d 312 (406)
++......+.. ..|.+. . ....... .-.|.....|. + .+ ......+++.|++++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 77765433333 333321 1 1000000 00111110010 0 00 0122345688999999999
Q ss_pred HHHHHHHhccccCCCCcchHHHHHHH--hcCCCeeeCC
Q 015471 313 LASYISINQHVLHKFANEDVSLGSWF--IGLDAEHIDD 348 (406)
Q Consensus 313 la~~I~~~s~~l~~~~~EDV~lG~~l--~gl~v~~~d~ 348 (406)
+...+---.+.+..+..||+-++.=+ .|..+..++.
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~ 252 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC 252 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccC
Confidence 99887644444444558998887555 4555544443
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=90.16 E-value=11 Score=38.92 Aligned_cols=163 Identities=13% Similarity=0.054 Sum_probs=85.5
Q ss_pred EEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHHHH
Q 015471 177 VMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGATL 256 (406)
Q Consensus 177 ~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L 256 (406)
.++.|-..|. ++.+...|++..+.+..|-.+...+.. .+. .+...+.+.-..+|++..|+|+.+.++-|..++
T Consensus 146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~~----~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll 218 (570)
T 2d7i_A 146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-GLI----RTRMLGASVATGDVITFLDSHCEANVNWLPPLL 218 (570)
T ss_dssp EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-CHH----HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-CHH----HHHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence 4555554443 233345565555666666555543322 222 233444443478999999999999987777776
Q ss_pred HhcCCCCceEEEEec---cCcc--ccc---CC----Ccccc-----C--cccccCCC-CCccCCCcCCCceeecHHHHHH
Q 015471 257 ARHRSKPRVYIGCMK---SGPV--LAQ---KG----VRYHE-----P--EYWKFGEE-GNKYFRHATGQLYAISKDLASY 316 (406)
Q Consensus 257 ~~~~~~~~ly~G~~~---~~pv--~r~---~~----~Kwyv-----p--~~~~fg~~-~~~YP~Y~~G~gYvlS~dla~~ 316 (406)
......+.+.+|... .+.. .+. .. -.|.. + ....+.++ .....+++.|++.++++++...
T Consensus 219 ~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 298 (570)
T 2d7i_A 219 DRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE 298 (570)
T ss_dssp HHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred HHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence 655433444444321 1110 000 00 00100 0 00000000 0112345789999999999998
Q ss_pred HHHhccccCCCCcchHHHHHHH--hcCCCeee
Q 015471 317 ISINQHVLHKFANEDVSLGSWF--IGLDAEHI 346 (406)
Q Consensus 317 I~~~s~~l~~~~~EDV~lG~~l--~gl~v~~~ 346 (406)
|---...+..+..||+-+..=+ .|..+..+
T Consensus 299 iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~ 330 (570)
T 2d7i_A 299 LGGYDPGLEIWGGEQYEISFKVWMCGGRMEDI 330 (570)
T ss_dssp TTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCcccccCcchHHHHHHHHhCCCeEEEc
Confidence 8543344444447999887555 45544433
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.06 E-value=13 Score=37.58 Aligned_cols=161 Identities=12% Similarity=-0.006 Sum_probs=84.2
Q ss_pred eEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHHH
Q 015471 176 IVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGAT 255 (406)
Q Consensus 176 i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~ 255 (406)
..+++|-..|. ++++ ....+.+..+-.+...+.. - .-.++..+.+.-..+|++..|+|+.+.++-|..+
T Consensus 99 ~EIIvVDDgS~--D~t~----~~~~~~~~~v~vi~~~~n~---G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l 167 (501)
T 2ffu_A 99 KEIILVDDYSN--DPED----GALLGKIEKVRVLRNDRRE---G--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167 (501)
T ss_dssp EEEEEEECSCS--CTHH----HHGGGGBTTEEEEECSSCC---H--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred eeEEEEECCCC--chHH----HHHHhcCCCEEEEECCCCc---C--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence 35666665443 2222 2223456666555443322 2 2334445555457899999999999998888777
Q ss_pred HHhcCCCCceEEEE-ec--cCccc---------cc-----CCCccc-cCcc-c--ccCCC-CCccCCCcCCCceeecHHH
Q 015471 256 LARHRSKPRVYIGC-MK--SGPVL---------AQ-----KGVRYH-EPEY-W--KFGEE-GNKYFRHATGQLYAISKDL 313 (406)
Q Consensus 256 L~~~~~~~~ly~G~-~~--~~pv~---------r~-----~~~Kwy-vp~~-~--~fg~~-~~~YP~Y~~G~gYvlS~dl 313 (406)
+......+...++. +. ..... +. ...+|. .+.. . ...++ .....+++.|++.++++++
T Consensus 168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 247 (501)
T 2ffu_A 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY 247 (501)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence 76654333333332 21 10000 00 000110 0100 0 00000 1123456789999999999
Q ss_pred HHHHHHhccccCCCCcchHHHHHHH--hcCCCeeeC
Q 015471 314 ASYISINQHVLHKFANEDVSLGSWF--IGLDAEHID 347 (406)
Q Consensus 314 a~~I~~~s~~l~~~~~EDV~lG~~l--~gl~v~~~d 347 (406)
...+-.-...+..+..||+-+..-+ .|..+..++
T Consensus 248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 248 FEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp HHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhCCCCccccccCcchHHHHHHHHhcCCeEEEcc
Confidence 9988643344444558999887544 455554444
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=88.37 E-value=13 Score=32.76 Aligned_cols=165 Identities=8% Similarity=0.014 Sum_probs=80.8
Q ss_pred CeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHH
Q 015471 175 GIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGA 254 (406)
Q Consensus 175 ~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~ 254 (406)
.+.++.|-..|. +.....+++-.+++..+..+. .+ |.. .-.+...+.+..+.+|++.+|+|.++.++.|..
T Consensus 34 ~~eiIvvDd~S~---d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~ 104 (240)
T 3bcv_A 34 DIEIILIDDESP---DNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104 (240)
T ss_dssp SEEEEEEECCCS---SSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred CeEEEEEECCCC---cCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence 456666665443 223344544455666766654 22 322 223444555545789999999999999888777
Q ss_pred HHHhcCC-CCceEEEEec----cCc----ccccC-CCccccCccc------ccCCCCCcc---C-CCcCCCceeecHHHH
Q 015471 255 TLARHRS-KPRVYIGCMK----SGP----VLAQK-GVRYHEPEYW------KFGEEGNKY---F-RHATGQLYAISKDLA 314 (406)
Q Consensus 255 ~L~~~~~-~~~ly~G~~~----~~p----v~r~~-~~Kwyvp~~~------~fg~~~~~Y---P-~Y~~G~gYvlS~dla 314 (406)
++..... ...+.+|... .+. +...+ ...++..... .++ ....+ + ...+|++.++.++++
T Consensus 105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rr~~~ 183 (240)
T 3bcv_A 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIA-SDPYAREERAIQVSAKVVLYRRNLI 183 (240)
T ss_dssp HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTS-SCHHHHHHHHHHHTCSCEEEEHHHH
T ss_pred HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhh-cchhhccccccccchhheeeeHHHH
Confidence 7765432 3344444321 111 10000 0011111000 000 00000 0 014578899999999
Q ss_pred HHHHHhccccCCCCcchHHHHHHHh--cCCCeeeCCC
Q 015471 315 SYISINQHVLHKFANEDVSLGSWFI--GLDAEHIDDR 349 (406)
Q Consensus 315 ~~I~~~s~~l~~~~~EDV~lG~~l~--gl~v~~~d~~ 349 (406)
+.+-..-.....+..||+.+..-+. |..+..++..
T Consensus 184 ~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 184 EKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 8853111111123469999986554 4455555554
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=88.11 E-value=14 Score=32.90 Aligned_cols=118 Identities=8% Similarity=-0.064 Sum_probs=68.2
Q ss_pred HHHHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcC--CCCceEEEEec----c--CcccccCCCccccCcccccCCC
Q 015471 223 KIFFATAVALWDADFYVKVDDDVHVNIATLGATLARHR--SKPRVYIGCMK----S--GPVLAQKGVRYHEPEYWKFGEE 294 (406)
Q Consensus 223 l~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~--~~~~ly~G~~~----~--~pv~r~~~~Kwyvp~~~~fg~~ 294 (406)
-..+..+.+..+.+|++..|+|.++.++.|...+.... +.-.+..|.+. . +.++ ..+..|....
T Consensus 77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~---- 148 (255)
T 1qg8_A 77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAAQV---- 148 (255)
T ss_dssp HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCCSC----
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchHHH----
Confidence 34555666656889999999999999888877776543 33345445432 1 1111 0111222100
Q ss_pred CCccCCCcCCCceeecHHHHHHHH-Hhc----cccCCCCcchHHHHHHHhcCC-CeeeCC
Q 015471 295 GNKYFRHATGQLYAISKDLASYIS-INQ----HVLHKFANEDVSLGSWFIGLD-AEHIDD 348 (406)
Q Consensus 295 ~~~YP~Y~~G~gYvlS~dla~~I~-~~s----~~l~~~~~EDV~lG~~l~gl~-v~~~d~ 348 (406)
......+..|++.++.++++..+- .-. ........||..+..-+...+ +..++.
T Consensus 149 ~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 208 (255)
T 1qg8_A 149 TWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDE 208 (255)
T ss_dssp BSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEE
T ss_pred HHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhCCEEEecC
Confidence 112344578999999999999986 220 011224579998877664333 334443
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=86.31 E-value=20 Score=38.15 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=68.4
Q ss_pred HHHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcC--CCCceEEEEec--cCc--------ccccCCCccc-cCcccc
Q 015471 224 IFFATAVALWDADFYVKVDDDVHVNIATLGATLARHR--SKPRVYIGCMK--SGP--------VLAQKGVRYH-EPEYWK 290 (406)
Q Consensus 224 ~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~--~~~~ly~G~~~--~~p--------v~r~~~~Kwy-vp~~~~ 290 (406)
.+++.+....+++|++..|||+.+.++.|..++.... +...++.|.+. ..+ .+...+..|. .|...+
T Consensus 258 ~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 337 (657)
T 4fix_A 258 RVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEY 337 (657)
T ss_dssp HHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCS
T ss_pred HHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccc
Confidence 3566665544899999999999999888877776543 22233333342 111 1100000010 000000
Q ss_pred ---cC-------------CCCCccCCCcCCCceeecHHHHHHHHHhccccCCCCcchHHHHHHHh--cCCCeeeCCCC
Q 015471 291 ---FG-------------EEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFI--GLDAEHIDDRR 350 (406)
Q Consensus 291 ---fg-------------~~~~~YP~Y~~G~gYvlS~dla~~I~~~s~~l~~~~~EDV~lG~~l~--gl~v~~~d~~~ 350 (406)
|+ ........|++|++.++.+++.+.+---.. -.+..||+-++.=+. |..+..+++..
T Consensus 338 ~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~ 413 (657)
T 4fix_A 338 DHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAA 413 (657)
T ss_dssp CEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEE
Confidence 00 001223457899999999999998743221 223469999987664 44444444333
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=83.57 E-value=27 Score=36.04 Aligned_cols=126 Identities=16% Similarity=0.130 Sum_probs=67.2
Q ss_pred HHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcCCCC-ceEEEEec---cCc--cc---ccC----------------
Q 015471 225 FFATAVALWDADFYVKVDDDVHVNIATLGATLARHRSKP-RVYIGCMK---SGP--VL---AQK---------------- 279 (406)
Q Consensus 225 ~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~~~~-~ly~G~~~---~~p--v~---r~~---------------- 279 (406)
.+..+.+..+.+|++..|+|+.+.++.|..++......+ ...+|... ... .. ...
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 344555545889999999999999888887776653222 23333321 111 00 000
Q ss_pred -------CCccccCccc---ccCCCCCccCCCcCCCceeecHHHHHHHHHhccccCCCCcchHHHHHHHh--cCCCeeeC
Q 015471 280 -------GVRYHEPEYW---KFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFI--GLDAEHID 347 (406)
Q Consensus 280 -------~~Kwyvp~~~---~fg~~~~~YP~Y~~G~gYvlS~dla~~I~~~s~~l~~~~~EDV~lG~~l~--gl~v~~~d 347 (406)
...|...... .+. .......++.|++.+++++++..+---...+..+..||.-++.=+. |..+..++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLR-LCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp -------CCCTHHHHHHHTTTTT-TCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred hhhccCCccccchhhhccccccc-ccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence 0011000000 000 0011123478999999999999884333334444479999986664 44444444
Q ss_pred CCCc
Q 015471 348 DRRL 351 (406)
Q Consensus 348 ~~~f 351 (406)
....
T Consensus 324 ~~~v 327 (625)
T 2z86_A 324 GAMA 327 (625)
T ss_dssp GGCE
T ss_pred cchh
Confidence 4333
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=71.68 E-value=68 Score=32.93 Aligned_cols=156 Identities=11% Similarity=0.036 Sum_probs=79.8
Q ss_pred CeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCceeeeHHHHHH
Q 015471 175 GIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDDVHVNIATLGA 254 (406)
Q Consensus 175 ~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~ 254 (406)
.+.++.|-..|.+ .....+.+-...+..+..+. . .|.. .-.++..+.+..+.+|++..|+|.++.++.|..
T Consensus 404 ~~eiivvdd~S~d---~t~~~~~~~~~~~~~i~~~~-~---~n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~ 474 (625)
T 2z86_A 404 DLEVCICDDGSTD---DTLRILQEHYANHPRVRFIS-Q---KNKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVEL 474 (625)
T ss_dssp SEEEEEEEESCSS---SHHHHHHHHHTTCTTEEEEE-E---CCCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHH
T ss_pred CeEEEEEECcCCh---hHHHHHHHHHhhCCcEEEEe-C---CCCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHHH
Confidence 4566666655542 23334444344555665553 2 2222 223445555545789999999999999988887
Q ss_pred HHHhcC--CCCceEEEEec----cCcccccCCCccccCcccccCCCCCccCCCcCCCceeecHHHHHHHHHhccccCCCC
Q 015471 255 TLARHR--SKPRVYIGCMK----SGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQHVLHKFA 328 (406)
Q Consensus 255 ~L~~~~--~~~~ly~G~~~----~~pv~r~~~~Kwyvp~~~~fg~~~~~YP~Y~~G~gYvlS~dla~~I~~~s~~l~~~~ 328 (406)
.+.... +.-.+..|... .+..+... +..|. +. .......++.|.+.++.+++...+---...+ ..
T Consensus 475 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~-~~---~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~~--~~ 545 (625)
T 2z86_A 475 CLDEFRKDLSLACVYTTNRNIDREGNLISNG---YNWPI-YS---REKLTSAMICHHFRMFTARAWNLTEGFNESI--SN 545 (625)
T ss_dssp HHHHHHHCTTCSEEEEEEEEECTTSCEEEEC---CCCSS-CC---HHHHTTSCCCCSCEEEEHHHHTTTTCCCSSC--SS
T ss_pred HHHHHHhCCCeeEEEeeeEEECCCCCEeccC---ccccc-CC---HHHHhhcccCCceEEEEHHHHHHhCCCCCcc--CC
Confidence 776542 22233333221 12111110 11111 00 0011223466788899998766543222222 24
Q ss_pred cchHHHHHHHhcCC-CeeeCC
Q 015471 329 NEDVSLGSWFIGLD-AEHIDD 348 (406)
Q Consensus 329 ~EDV~lG~~l~gl~-v~~~d~ 348 (406)
.||.-+..-+...+ +.+++.
T Consensus 546 ~eD~dl~~r~~~~g~~~~~~~ 566 (625)
T 2z86_A 546 AVDYDMYLKLSEVGPFKHINK 566 (625)
T ss_dssp CHHHHHHHHHTTTSCEEEEEE
T ss_pred hHHHHHHHHHHHhCCEEEeCC
Confidence 69998876664443 334443
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=70.59 E-value=1.2e+02 Score=32.77 Aligned_cols=128 Identities=12% Similarity=-0.008 Sum_probs=69.1
Q ss_pred HHHHHHhcCCccEEEEecCceeeeHHHHHHHHHhcC--CCCceEEEEec--c-CcccccCCCccccCc-cc-ccCC--C-
Q 015471 225 FFATAVALWDADFYVKVDDDVHVNIATLGATLARHR--SKPRVYIGCMK--S-GPVLAQKGVRYHEPE-YW-KFGE--E- 294 (406)
Q Consensus 225 ~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~~L~~~~--~~~~ly~G~~~--~-~pv~r~~~~Kwyvp~-~~-~fg~--~- 294 (406)
.++.+.+..+.+|++.+|+|+.+.++.|...+.... ++-.+..|... . .+..+....-...+. .. ++.. .
T Consensus 229 alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (802)
T 4hg6_A 229 NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRG 308 (802)
T ss_dssp HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHH
T ss_pred HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhh
Confidence 456666656899999999999999988888877652 33223323221 1 111000000000000 00 0000 0
Q ss_pred -CCccCCCcCCCceeecHHHHHHHHHhccccCCCCcchHHHHHHHh--cCCCeeeCCCCcccCC
Q 015471 295 -GNKYFRHATGQLYAISKDLASYISINQHVLHKFANEDVSLGSWFI--GLDAEHIDDRRLCCGT 355 (406)
Q Consensus 295 -~~~YP~Y~~G~gYvlS~dla~~I~~~s~~l~~~~~EDV~lG~~l~--gl~v~~~d~~~f~~~~ 355 (406)
...-.+++.|++.++.+++.+.+---.. ....||..++.-+. |..+..+++.......
T Consensus 309 ~~~~~~~~~~G~~~~~Rr~al~~vGgf~~---~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 309 LDRWGGAFFCGSAAVLRRRALDEAGGFAG---ETITEDAETALEIHSRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp HHHTTCCCCCSSSEEEEHHHHHHHTTCCC---SSSSHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred HhhcCCceecccchhhhHHHHHHcCCcCC---CCcchHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence 0001134679999999999998742211 22359999998885 4445566665554433
No 11
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=37.62 E-value=39 Score=23.98 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=21.1
Q ss_pred HhhHHHHHHhhhhHHHHHHHHHHHhh
Q 015471 86 SKTHHAIQALDKTISNLEMELAAARA 111 (406)
Q Consensus 86 ~~~~~~~~~~~~~i~~le~el~~~~~ 111 (406)
......++.|+|+|..||.+|..++-
T Consensus 8 efAERsV~KLek~ID~LEdeL~~eKe 33 (52)
T 2z5i_A 8 YHLENEVARLKKLVDDLEDELYAQKL 33 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34455778999999999999998864
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=35.25 E-value=1.9e+02 Score=28.55 Aligned_cols=164 Identities=8% Similarity=-0.048 Sum_probs=84.5
Q ss_pred eEEEEEeecCCCCCCchHHHHHHHHh-hcCC-EEEeeccc-c--CCchhHHHHHHHHHHHhcCCccEEEEecCce-eeeH
Q 015471 176 IVMRFVIGHSATSGGILDRAIEAEDK-KHGD-FLRLEHVE-G--YLELSAKTKIFFATAVALWDADFYVKVDDDV-HVNI 249 (406)
Q Consensus 176 i~v~FvlG~s~~~~~~~~~~L~~E~~-~~~D-IL~ldf~D-s--Y~nLt~Ktl~~~~wa~~~~~a~fvlKvDDDv-fVnv 249 (406)
..+++|=+-|++....+-+.+..+.. .++. ++..-... . -.....=...+|+||...-+.++++.+|-|. ..++
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P 108 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGP 108 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCH
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCH
Confidence 45788888776310011111222332 3444 33332220 1 1234445677888887334789999999999 4888
Q ss_pred HHHHHHHHhcCCCCceEEEEecc---CcccccCCCcc----ccCcccccCCCCCccCCCcCCCceeecHHHHHHHHHhc-
Q 015471 250 ATLGATLARHRSKPRVYIGCMKS---GPVLAQKGVRY----HEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQ- 321 (406)
Q Consensus 250 ~~L~~~L~~~~~~~~ly~G~~~~---~pv~r~~~~Kw----yvp~~~~fg~~~~~YP~Y~~G~gYvlS~dla~~I~~~s- 321 (406)
+-+..++....+.-.+.+|.... +..+.....+. +.+.. .....+...++.+++++++++.+....
T Consensus 109 ~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~------~~~~i~dp~sG~~a~~R~vl~~l~~~~~ 182 (397)
T 2bo4_A 109 DWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHT------ELSWIEQPLGGELLMRREVAAMLYEDER 182 (397)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTS------SGGGCSCTTCCCEEEEHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHh------hccccccCCcccEEEeHHHHHHHhhhcc
Confidence 88887776653334566775321 11111111111 11110 001223345778899999999885421
Q ss_pred -cccCCCCcchHHHHHHH--hcCCCeee
Q 015471 322 -HVLHKFANEDVSLGSWF--IGLDAEHI 346 (406)
Q Consensus 322 -~~l~~~~~EDV~lG~~l--~gl~v~~~ 346 (406)
.....|. .|+.+-..+ .|+.|..+
T Consensus 183 ~~~~~~fg-~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 183 VRRRSDWG-IDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp HHTCCSTT-HHHHHHHHHHHTTCCEEEE
T ss_pred cCcCCCcc-hHHHHHHHHHHcCCEEEEE
Confidence 1223343 366665444 46666533
No 13
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.64 E-value=66 Score=25.16 Aligned_cols=74 Identities=26% Similarity=0.252 Sum_probs=45.3
Q ss_pred EeCCCCCHHHHHHHHHHhccCCcccccccccCCeEEEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHH
Q 015471 143 INSAFSSRKRRDSVRATWMPQGDKRKKLEEEKGIVMRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKT 222 (406)
Q Consensus 143 V~S~p~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Kt 222 (406)
|.|+.++.+-|+.|...=-+ ..-.++||-|.+.+. -...+.|+++-|=-.-.=-.-...+||..+
T Consensus 31 irtatssqdirdiiksmkdn-----------gkplvvfvngasqnd----vnefqneakkegvsydvlkstdpeeltqrv 95 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDN-----------GKPLVVFVNGASQND----VNEFQNEAKKEGVSYDVLKSTDPEELTQRV 95 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTC-----------CSCEEEEECSCCHHH----HHHHHHHHHHHTCEEEEEECCCHHHHHHHH
T ss_pred eeeccchhhHHHHHHHHHhc-----------CCeEEEEecCccccc----HHHHHHHHHhcCcchhhhccCCHHHHHHHH
Confidence 56777788888888764222 223578999988642 234566666654321111122345789999
Q ss_pred HHHHHHHHh
Q 015471 223 KIFFATAVA 231 (406)
Q Consensus 223 l~~~~wa~~ 231 (406)
..|++.+-.
T Consensus 96 reflktags 104 (112)
T 2lnd_A 96 REFLKTAGS 104 (112)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHhccc
Confidence 999988753
No 14
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=33.74 E-value=2.7e+02 Score=25.20 Aligned_cols=145 Identities=13% Similarity=0.023 Sum_probs=78.6
Q ss_pred EEEEeecCCCCCCchHHHHHHHHhhcCCEEEeeccccCCchhHHHHHHHHHHHhcCCccEEEEecCc---eeeeHHHHHH
Q 015471 178 MRFVIGHSATSGGILDRAIEAEDKKHGDFLRLEHVEGYLELSAKTKIFFATAVALWDADFYVKVDDD---VHVNIATLGA 254 (406)
Q Consensus 178 v~FvlG~s~~~~~~~~~~L~~E~~~~~DIL~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~fvlKvDDD---vfVnv~~L~~ 254 (406)
..|++-.-. + ..-.|..+..+.|==+++.+.++.-... .-.+.=.|+ ...++++++.+|.| +-.+++.+.+
T Consensus 3 ~~~~~~~~~---~-~~l~l~~~l~~~gi~~~l~~~~SlI~ra-RN~lv~~Fl-~~~~~dhllfIDAD~~~I~FdPe~V~r 76 (203)
T 2c0n_A 3 TLFFIPSMG---S-VRLPLIDFLVKNDIEYVILSRRNHVAVQ-REIALDMFL-EMKDYDTLAFLDEDVVPIEIDFQKVEA 76 (203)
T ss_dssp EEEEEECSS---C-CCHHHHHHHHHTTCCEEEECCCSCHHHH-HHHHHHHHH-HCTTCCEEEEECTTEEEEECCHHHHHH
T ss_pred eEEEeccCC---c-eehHHHHHHHhCCCeEEEEccccchHHH-HHHHHHHHH-hcCCCCEEEEEeCCCCccccCHHHHHH
Confidence 456664332 1 1234555555554445666553332111 122222233 34689999999999 9999999999
Q ss_pred HHHhcCCCCceEEEEe--ccCcccccCCCccccCcccccCCCCCccCCCcCCCceeecHHHHHHHHHhcc------ccCC
Q 015471 255 TLARHRSKPRVYIGCM--KSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLASYISINQH------VLHK 326 (406)
Q Consensus 255 ~L~~~~~~~~ly~G~~--~~~pv~r~~~~Kwyvp~~~~fg~~~~~YP~Y~~G~gYvlS~dla~~I~~~s~------~l~~ 326 (406)
+|+. ..++.+|.- ++..-. ....+.|.-. +. ..=-.||+.|.-+++|.+...|....- ..+.
T Consensus 77 Ll~~---g~DVV~GsYp~K~~~~~-s~~a~~y~~~---i~---~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~ 146 (203)
T 2c0n_A 77 KFNE---GYDVVCGYYYLKTLRGY-SVYRKDWEKE---IF---DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPH 146 (203)
T ss_dssp HHHH---TCSEEEEECBCTTSSSB-SEESSSBCSS---CC---CEECSEECSSEEEEEHHHHTTSCSSCCCC--------
T ss_pred HHhC---CCCEEEEEeeccCCCcc-chHHHHHHHh---cc---CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhcc
Confidence 9955 357888874 221100 0001111111 10 112356889999999999998865422 1122
Q ss_pred CCcchHHHHHHH
Q 015471 327 FANEDVSLGSWF 338 (406)
Q Consensus 327 ~~~EDV~lG~~l 338 (406)
.--|||++=.-.
T Consensus 147 ~~gEdv~F~~~~ 158 (203)
T 2c0n_A 147 WIGEDVYFFSTH 158 (203)
T ss_dssp -CCHHHHHHHHH
T ss_pred ccCCceEEEecc
Confidence 224888875544
No 15
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=29.30 E-value=50 Score=22.63 Aligned_cols=30 Identities=17% Similarity=0.372 Sum_probs=21.2
Q ss_pred chhhhchHhhHHHHHHhhhhHHHHHHHHHHHhh
Q 015471 79 AEILGEVSKTHHAIQALDKTISNLEMELAAARA 111 (406)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~i~~le~el~~~~~ 111 (406)
.+++.++...++ +|+++|..||..|.+-..
T Consensus 8 ydlvsel~~r~e---~LE~Ri~~LE~KLd~L~~ 37 (43)
T 2pnv_A 8 YDMISDLNERSE---DFEKRIVTLETKLETLIG 37 (43)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhH---HHHHHHHHHHHHHHHHHH
Confidence 345555555554 689999999999887664
No 16
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=24.30 E-value=99 Score=19.42 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=17.9
Q ss_pred chHhhHHHHHHhhhhHHHHHHHHHH
Q 015471 84 EVSKTHHAIQALDKTISNLEMELAA 108 (406)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~le~el~~ 108 (406)
+|.+-.-.+|+|++++..||.-..|
T Consensus 7 ~~r~l~~ivq~lq~r~drle~tvqa 31 (32)
T 2akf_A 7 DVRNLNAIVQKLQERLDRLEETVQA 31 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444334789999999999986543
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=24.00 E-value=1.7e+02 Score=28.31 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=47.7
Q ss_pred HHHHHHHhcCCccEEEEecCceeeeHHHHHH---HHHhcCCCCceEEEEecc--CcccccCCCccccCcccccCCCCCcc
Q 015471 224 IFFATAVALWDADFYVKVDDDVHVNIATLGA---TLARHRSKPRVYIGCMKS--GPVLAQKGVRYHEPEYWKFGEEGNKY 298 (406)
Q Consensus 224 ~~~~wa~~~~~a~fvlKvDDDvfVnv~~L~~---~L~~~~~~~~ly~G~~~~--~pv~r~~~~Kwyvp~~~~fg~~~~~Y 298 (406)
.++.++.+..++++++.+|||..+.++-+.- .|......++++ |+.+ .+....... -..+...|+
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n~~g~~~~~~-~~~~~~lyr------- 158 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWNDNGKEQMVD-SSKPELLYR------- 158 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCCTTCBGGGSC-TTCTTCEEE-------
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEecccCcccccccc-ccCcceEEe-------
Confidence 4555655544799999999999999876633 333333455664 3321 111000000 011222221
Q ss_pred CCCcCCCceeecHHHHHHHHH
Q 015471 299 FRHATGQLYAISKDLASYISI 319 (406)
Q Consensus 299 P~Y~~G~gYvlS~dla~~I~~ 319 (406)
-.|..|.|+++++++-+.+-.
T Consensus 159 s~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 159 TDFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHGG
T ss_pred ecCCCchhhhhcHHHHHHHhh
Confidence 123468899999999986643
Done!