Query 015473
Match_columns 406
No_of_seqs 218 out of 1249
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 13:14:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015473.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015473hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dlqa4 g.37.1.1 (A:8-34) GLI- 57.9 1.4 0.0001 24.1 0.6 10 6-15 1-10 (27)
2 d1rwja_ a.138.1.1 (A:) Cytochr 31.6 5.2 0.00038 28.5 0.3 16 4-19 28-43 (81)
3 d1nmla1 a.3.1.5 (A:1-166) Di-h 29.3 7.9 0.00057 31.3 1.1 36 2-37 45-81 (166)
4 d1iqca1 a.3.1.5 (A:1-150) Di-h 26.4 7.1 0.00052 31.0 0.2 34 2-35 33-67 (150)
5 d1eb7a1 a.3.1.5 (A:1-164) Di-h 24.3 10 0.00076 30.5 0.9 34 2-35 45-79 (164)
6 d1pw4a_ f.38.1.1 (A:) Glycerol 21.7 2.2E+02 0.016 24.0 14.3 17 172-188 20-36 (447)
7 d1x61a2 g.39.1.3 (A:35-66) Thy 21.5 12 0.00088 21.2 0.5 12 8-19 2-13 (32)
8 d1rutx4 g.39.1.3 (X:114-146) L 18.6 17 0.0013 20.6 0.8 14 7-21 1-14 (33)
9 d1pbya1 a.3.1.7 (A:1-85) Quino 18.2 20 0.0015 25.4 1.3 9 7-15 10-18 (85)
10 d1kx7a_ a.3.1.1 (A:) Mono-heme 17.5 37 0.0027 23.0 2.6 19 7-25 13-31 (81)
No 1
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.94 E-value=1.4 Score=24.06 Aligned_cols=10 Identities=50% Similarity=1.378 Sum_probs=8.1
Q ss_pred eeeccccccc
Q 015473 6 IECSVCHSKL 15 (406)
Q Consensus 6 ~~~~~~~~~~ 15 (406)
++|+.||.+.
T Consensus 1 vqcp~c~k~f 10 (27)
T d2dlqa4 1 VECPTCHKKF 10 (27)
T ss_dssp CCCTTTCCCC
T ss_pred CcCcchHHHH
Confidence 5899999764
No 2
>d1rwja_ a.138.1.1 (A:) Cytochrome c7 (cytochrome c551.5, PpcA) {Geobacter sulfurreducens, GSU1996 [TaxId: 35554]}
Probab=31.56 E-value=5.2 Score=28.53 Aligned_cols=16 Identities=44% Similarity=0.964 Sum_probs=12.2
Q ss_pred CceeecccccccccCC
Q 015473 4 GMIECSVCHSKLVSPT 19 (406)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (406)
++..|.+||.++-...
T Consensus 28 ~~~~C~~CH~~iF~~~ 43 (81)
T d1rwja_ 28 GMYKCNECHTKLFAYK 43 (81)
T ss_dssp TTCCGGGTBTTTBCSS
T ss_pred CcCCccccchhhcccC
Confidence 4568999999975544
No 3
>d1nmla1 a.3.1.5 (A:1-166) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=29.26 E-value=7.9 Score=31.33 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=23.0
Q ss_pred CCCceeecccccccccCCc-cchhhhhccCCcccchh
Q 015473 2 KNGMIECSVCHSKLVSPTT-KSISRAYDRHKTRVSSK 37 (406)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~k 37 (406)
+||.+-|..||..-....+ ...+.-.|++...++.-
T Consensus 45 ~~~~~SCaSCH~~~~~f~d~~~~s~g~~g~~g~RN~P 81 (166)
T d1nmla1 45 SSHLISCNTCHNVGLGGDDELPTSIGHGWQKGPRNSP 81 (166)
T ss_dssp TTSCCCHHHHSCTTTTTSCSSCBSCSTTCCSSCBCCC
T ss_pred CCCCcccccccChhhccccccccccccCCccCCCCCc
Confidence 5899999999964433333 45566666666555443
No 4
>d1iqca1 a.3.1.5 (A:1-150) Di-heme cytochrome c peroxidase {Nitrosomonas europaea [TaxId: 915]}
Probab=26.37 E-value=7.1 Score=31.00 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=20.7
Q ss_pred CCCceeecccccccccCCc-cchhhhhccCCcccc
Q 015473 2 KNGMIECSVCHSKLVSPTT-KSISRAYDRHKTRVS 35 (406)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 35 (406)
+||.+-|..||..-....+ ...+.-.+++...++
T Consensus 33 ~~~~~SCasCH~~~~~~~D~~~~s~g~~g~~~~RN 67 (150)
T d1iqca1 33 KSGFISCNSCHNLSMGGTDNITTSIGHKWQQGPIN 67 (150)
T ss_dssp SSSCCCHHHHSBTTTTSBCCSSSCEEGGGEECSSC
T ss_pred CCCCCCcccccChhhcCCCCcccccCcCCCcCCCc
Confidence 5789999999975444333 344555555444333
No 5
>d1eb7a1 a.3.1.5 (A:1-164) Di-heme cytochrome c peroxidase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.28 E-value=10 Score=30.49 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=21.0
Q ss_pred CCCceeecccccccccCCc-cchhhhhccCCcccc
Q 015473 2 KNGMIECSVCHSKLVSPTT-KSISRAYDRHKTRVS 35 (406)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 35 (406)
+||.+-|..||..-....+ ...+...+++...++
T Consensus 45 ~~~~~SCaSCH~~~~~f~D~~~~s~g~~g~~~~RN 79 (164)
T d1eb7a1 45 RSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRN 79 (164)
T ss_dssp TTSCCCHHHHSCTTTTTSCCSSCBCCSTTCSSCBC
T ss_pred CCCCCCCccccCcccccccccccccCcCCccCCCc
Confidence 5889999999975444333 344555555444444
No 6
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=21.70 E-value=2.2e+02 Score=23.96 Aligned_cols=17 Identities=12% Similarity=0.512 Sum_probs=9.6
Q ss_pred CHHHHHHHHHHHHHHhh
Q 015473 172 SIIQWEALALLLIGISV 188 (406)
Q Consensus 172 s~~qwlal~ll~~GV~l 188 (406)
.+.||.-+++.+++...
T Consensus 20 ~~~~w~i~~~~~~~~~~ 36 (447)
T d1pw4a_ 20 RRLRWQIFLGIFFGYAA 36 (447)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 34567666666655433
No 7
>d1x61a2 g.39.1.3 (A:35-66) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.45 E-value=12 Score=21.25 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=9.3
Q ss_pred ecccccccccCC
Q 015473 8 CSVCHSKLVSPT 19 (406)
Q Consensus 8 ~~~~~~~~~~~~ 19 (406)
|.+||+|+--.+
T Consensus 2 C~tC~~kLRGqp 13 (32)
T d1x61a2 2 CSTCRAQLRGQH 13 (32)
T ss_dssp CSSSCCBCTTSC
T ss_pred eeEeCceecCCc
Confidence 889999876554
No 8
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.56 E-value=17 Score=20.63 Aligned_cols=14 Identities=43% Similarity=1.092 Sum_probs=10.0
Q ss_pred eecccccccccCCcc
Q 015473 7 ECSVCHSKLVSPTTK 21 (406)
Q Consensus 7 ~~~~~~~~~~~~~~~ 21 (406)
.|+.||..++ |+++
T Consensus 1 tC~tC~n~LV-PGDR 14 (33)
T d1rutx4 1 TCSTCRNRLV-PGDR 14 (33)
T ss_dssp BCTTTCCBCC-TTCE
T ss_pred Cccccccccc-CCce
Confidence 4999999875 4443
No 9
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Paracoccus denitrificans [TaxId: 266]}
Probab=18.18 E-value=20 Score=25.35 Aligned_cols=9 Identities=33% Similarity=1.066 Sum_probs=7.5
Q ss_pred eeccccccc
Q 015473 7 ECSVCHSKL 15 (406)
Q Consensus 7 ~~~~~~~~~ 15 (406)
-|+.|||..
T Consensus 10 ~C~~CHs~~ 18 (85)
T d1pbya1 10 ACAACHVQH 18 (85)
T ss_dssp TGGGTSCBC
T ss_pred HHHHhCCcc
Confidence 599999974
No 10
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=17.51 E-value=37 Score=22.96 Aligned_cols=19 Identities=42% Similarity=0.663 Sum_probs=12.5
Q ss_pred eecccccccccCCccchhh
Q 015473 7 ECSVCHSKLVSPTTKSISR 25 (406)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (406)
-|..||.....+.++...+
T Consensus 13 ~Ca~CHg~~~~G~p~~~~~ 31 (81)
T d1kx7a_ 13 ACTVCHSMGVAGAPKSHNT 31 (81)
T ss_dssp TTTSSTTTTCTTCCCSSCS
T ss_pred HHHHHccCCCCCCCCCCCh
Confidence 4999998766554444333
Done!