Query 015474
Match_columns 406
No_of_seqs 201 out of 1935
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015474.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015474hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1389 3-oxoacyl CoA thiolase 100.0 8.5E-89 1.8E-93 625.6 25.4 390 4-406 1-391 (435)
2 PLN02287 3-ketoacyl-CoA thiola 100.0 2.7E-78 5.8E-83 611.8 39.3 402 1-406 1-402 (452)
3 PRK08242 acetyl-CoA acetyltran 100.0 4.8E-73 1E-77 566.2 36.4 347 49-406 1-371 (402)
4 PRK06504 acetyl-CoA acetyltran 100.0 1.9E-72 4.1E-77 561.3 36.3 351 49-406 1-359 (390)
5 PRK06025 acetyl-CoA acetyltran 100.0 5.6E-72 1.2E-76 556.1 35.5 350 49-406 1-386 (417)
6 PRK06366 acetyl-CoA acetyltran 100.0 2.2E-72 4.9E-77 562.3 32.7 341 49-406 1-356 (388)
7 PRK09052 acetyl-CoA acetyltran 100.0 9.9E-72 2.1E-76 558.1 36.9 362 45-406 1-368 (399)
8 PRK13359 beta-ketoadipyl CoA t 100.0 1.4E-71 3.1E-76 556.3 34.8 351 49-406 1-369 (400)
9 PRK07661 acetyl-CoA acetyltran 100.0 2.2E-71 4.8E-76 554.6 35.4 355 49-406 1-360 (391)
10 PRK07850 acetyl-CoA acetyltran 100.0 5.8E-71 1.3E-75 550.9 36.9 350 49-406 1-356 (387)
11 TIGR02445 fadA fatty oxidation 100.0 3.5E-71 7.7E-76 552.1 34.5 349 51-406 1-354 (385)
12 KOG1390 Acetyl-CoA acetyltrans 100.0 1E-72 2.2E-77 521.2 21.4 350 49-406 5-365 (396)
13 PRK09051 beta-ketothiolase; Pr 100.0 7.3E-71 1.6E-75 551.4 36.5 351 49-406 2-363 (394)
14 PRK08235 acetyl-CoA acetyltran 100.0 4.3E-71 9.3E-76 553.3 34.4 351 49-406 1-362 (393)
15 PRK08947 fadA 3-ketoacyl-CoA t 100.0 6.1E-71 1.3E-75 551.1 35.4 351 49-406 1-356 (387)
16 PRK07108 acetyl-CoA acetyltran 100.0 1.4E-70 3E-75 549.1 35.4 356 49-406 1-361 (392)
17 PRK06205 acetyl-CoA acetyltran 100.0 4.8E-70 1E-74 548.2 37.0 351 49-406 1-372 (404)
18 PRK06633 acetyl-CoA acetyltran 100.0 1.5E-70 3.3E-75 547.0 32.8 349 50-406 3-361 (392)
19 PRK08131 acetyl-CoA acetyltran 100.0 5.7E-70 1.2E-74 545.3 36.5 352 49-406 1-369 (401)
20 PRK09050 beta-ketoadipyl CoA t 100.0 4.4E-70 9.5E-75 546.1 34.7 352 49-406 1-370 (401)
21 TIGR02430 pcaF beta-ketoadipyl 100.0 4.4E-70 9.6E-75 545.5 33.6 351 50-406 1-369 (400)
22 PRK06445 acetyl-CoA acetyltran 100.0 1.7E-69 3.7E-74 542.8 35.3 351 49-406 1-363 (394)
23 PRK05656 acetyl-CoA acetyltran 100.0 3.6E-69 7.8E-74 540.0 36.2 351 49-406 1-362 (393)
24 TIGR02446 FadI fatty oxidation 100.0 7.6E-69 1.7E-73 541.2 34.5 347 50-406 7-399 (430)
25 PRK08963 fadI 3-ketoacyl-CoA t 100.0 2.5E-68 5.4E-73 538.9 33.7 347 50-406 5-397 (428)
26 KOG1391 Acetyl-CoA acetyltrans 100.0 2.8E-69 6E-74 485.9 23.6 349 50-405 4-363 (396)
27 PRK06954 acetyl-CoA acetyltran 100.0 6.8E-68 1.5E-72 531.1 35.3 349 49-406 6-366 (397)
28 PRK05790 putative acyltransfer 100.0 4.1E-67 8.9E-72 526.3 36.7 351 49-406 1-362 (393)
29 PRK08170 acetyl-CoA acetyltran 100.0 4.1E-67 8.8E-72 530.0 33.9 346 49-406 2-395 (426)
30 PRK09268 acetyl-CoA acetyltran 100.0 1.1E-66 2.4E-71 525.5 34.3 343 48-406 5-397 (427)
31 PRK07801 acetyl-CoA acetyltran 100.0 2.8E-65 6E-70 510.9 33.5 340 49-406 1-351 (382)
32 PRK06690 acetyl-CoA acetyltran 100.0 1.3E-64 2.9E-69 498.8 32.0 327 51-406 2-329 (361)
33 PRK07851 acetyl-CoA acetyltran 100.0 3.8E-64 8.2E-69 505.1 34.1 348 49-406 1-374 (406)
34 PLN02644 acetyl-CoA C-acetyltr 100.0 1.1E-63 2.5E-68 500.5 35.9 350 50-406 1-362 (394)
35 cd00751 thiolase Thiolase are 100.0 3.7E-63 8E-68 496.6 33.8 346 53-406 1-356 (386)
36 TIGR01930 AcCoA-C-Actrans acet 100.0 1.5E-62 3.3E-67 491.6 33.8 345 54-406 1-357 (386)
37 PRK06157 acetyl-CoA acetyltran 100.0 1E-58 2.2E-63 465.2 30.9 315 50-406 7-357 (398)
38 PRK06365 acetyl-CoA acetyltran 100.0 6.3E-59 1.4E-63 469.9 29.5 318 48-406 14-384 (430)
39 PRK12578 acetyl-CoA acetyltran 100.0 1.8E-58 4E-63 462.5 29.6 316 50-406 1-346 (385)
40 PTZ00455 3-ketoacyl-CoA thiola 100.0 6.8E-58 1.5E-62 462.3 31.3 332 49-406 11-398 (438)
41 PRK08256 lipid-transfer protei 100.0 5.3E-58 1.2E-62 459.9 28.4 313 51-406 2-353 (391)
42 COG0183 PaaJ Acetyl-CoA acetyl 100.0 6.6E-59 1.4E-63 464.5 19.3 344 49-406 1-356 (392)
43 PRK06059 lipid-transfer protei 100.0 6.5E-57 1.4E-61 453.2 30.2 317 49-406 3-362 (399)
44 PRK06289 acetyl-CoA acetyltran 100.0 5E-57 1.1E-61 454.4 27.7 324 50-406 3-365 (403)
45 PRK06064 acetyl-CoA acetyltran 100.0 1.3E-56 2.8E-61 449.9 29.0 317 49-406 1-347 (389)
46 PRK06066 acetyl-CoA acetyltran 100.0 3.4E-56 7.4E-61 442.6 30.4 313 48-406 2-347 (385)
47 PRK06065 acetyl-CoA acetyltran 100.0 2.9E-56 6.2E-61 445.2 29.6 314 50-406 9-353 (392)
48 cd00829 SCP-x_thiolase Thiolas 100.0 2.3E-56 4.9E-61 446.5 28.8 310 55-406 1-340 (375)
49 PRK07516 acetyl-CoA acetyltran 100.0 2.1E-56 4.6E-61 448.1 28.3 313 49-406 1-349 (389)
50 PRK08313 acetyl-CoA acetyltran 100.0 9.1E-56 2E-60 442.2 30.5 315 49-406 2-345 (386)
51 cd00826 nondecarbox_cond_enzym 100.0 2E-55 4.2E-60 440.6 29.6 324 55-406 1-358 (393)
52 PRK06158 thiolase; Provisional 100.0 1.4E-55 3.1E-60 440.8 27.7 309 50-406 8-342 (384)
53 PRK08142 acetyl-CoA acetyltran 100.0 9.4E-55 2E-59 433.8 28.3 311 50-406 5-345 (388)
54 PRK07937 lipid-transfer protei 100.0 4.9E-53 1.1E-57 416.0 29.3 309 49-406 1-318 (352)
55 PF00108 Thiolase_N: Thiolase, 100.0 6.7E-53 1.5E-57 400.7 24.4 252 49-307 1-264 (264)
56 PRK07855 lipid-transfer protei 100.0 9.3E-51 2E-55 405.6 29.7 307 50-405 4-351 (386)
57 PRK08257 acetyl-CoA acetyltran 100.0 1.6E-48 3.4E-53 400.0 31.3 318 50-406 4-366 (498)
58 KOG1406 Peroxisomal 3-ketoacyl 100.0 3.4E-51 7.5E-56 370.0 9.9 318 48-406 4-361 (408)
59 KOG1392 Acetyl-CoA acetyltrans 100.0 8.2E-51 1.8E-55 371.3 11.8 346 47-404 39-430 (465)
60 TIGR03150 fabF beta-ketoacyl-a 99.9 4.4E-26 9.6E-31 230.2 18.9 239 75-405 71-350 (407)
61 PRK07314 3-oxoacyl-(acyl carri 99.9 2E-25 4.3E-30 225.9 20.4 242 74-405 71-351 (411)
62 cd00327 cond_enzymes Condensin 99.9 1.9E-25 4.1E-30 210.9 17.2 206 74-405 6-218 (254)
63 PRK06333 3-oxoacyl-(acyl carri 99.9 7.4E-25 1.6E-29 222.6 20.2 241 75-405 82-362 (424)
64 PTZ00050 3-oxoacyl-acyl carrie 99.9 1.7E-24 3.7E-29 219.5 21.8 245 71-404 73-359 (421)
65 PF02803 Thiolase_C: Thiolase, 99.9 1.1E-25 2.4E-30 187.9 5.8 93 314-406 1-93 (123)
66 PRK14691 3-oxoacyl-(acyl carri 99.9 2.4E-23 5.1E-28 204.6 20.2 239 75-404 4-279 (342)
67 KOG1394 3-oxoacyl-(acyl-carrie 99.9 4.7E-24 1E-28 201.2 12.9 234 75-402 94-373 (440)
68 PRK05952 3-oxoacyl-(acyl carri 99.9 1.4E-22 3.1E-27 202.1 22.4 230 76-404 57-325 (381)
69 cd00825 decarbox_cond_enzymes 99.9 3.4E-23 7.4E-28 203.2 17.1 246 51-405 1-278 (332)
70 PLN02836 3-oxoacyl-[acyl-carri 99.9 1.9E-22 4E-27 205.4 22.8 240 74-405 92-376 (437)
71 PRK08722 3-oxoacyl-(acyl carri 99.9 2.2E-22 4.7E-27 203.4 19.2 240 75-404 74-353 (414)
72 COG0304 FabB 3-oxoacyl-(acyl-c 99.9 7.4E-22 1.6E-26 196.9 22.3 241 72-404 68-350 (412)
73 cd00834 KAS_I_II Beta-ketoacyl 99.9 3.5E-22 7.6E-27 201.7 20.1 242 74-405 70-350 (406)
74 smart00825 PKS_KS Beta-ketoacy 99.9 1.2E-22 2.5E-27 206.4 16.4 235 75-405 87-357 (424)
75 PRK07103 polyketide beta-ketoa 99.9 7.1E-22 1.5E-26 199.7 19.6 242 74-405 79-353 (410)
76 PLN02787 3-oxoacyl-[acyl-carri 99.9 3.2E-21 6.9E-26 199.3 22.0 234 77-404 201-478 (540)
77 cd00828 elong_cond_enzymes "el 99.9 3.4E-21 7.3E-26 194.7 20.1 239 74-404 71-348 (407)
78 PRK07910 3-oxoacyl-(acyl carri 99.9 9.8E-21 2.1E-25 191.5 21.4 238 75-404 83-358 (418)
79 PRK06519 3-oxoacyl-(acyl carri 99.9 4.6E-20 1E-24 184.9 22.3 225 75-404 73-348 (398)
80 cd00833 PKS polyketide synthas 99.8 1.4E-20 3.1E-25 190.8 16.5 236 74-404 86-356 (421)
81 PRK09116 3-oxoacyl-(acyl carri 99.8 8.1E-20 1.7E-24 184.2 21.5 236 75-404 73-346 (405)
82 PRK06501 3-oxoacyl-(acyl carri 99.8 7.9E-20 1.7E-24 185.5 21.6 239 74-404 74-363 (425)
83 cd00832 CLF Chain-length facto 99.8 9.8E-20 2.1E-24 183.4 21.6 236 75-404 71-342 (399)
84 PRK08439 3-oxoacyl-(acyl carri 99.8 1.9E-19 4E-24 181.9 20.8 237 75-404 72-346 (406)
85 COG0332 FabH 3-oxoacyl-[acyl-c 99.8 5.5E-20 1.2E-24 177.4 14.3 209 71-398 48-284 (323)
86 PRK06147 3-oxoacyl-(acyl carri 99.8 4E-19 8.6E-24 175.8 18.7 228 72-404 62-308 (348)
87 PRK07967 3-oxoacyl-(acyl carri 99.8 2.8E-18 6E-23 172.9 21.2 233 75-404 71-343 (406)
88 PRK09352 3-oxoacyl-(acyl carri 99.8 2.4E-18 5.2E-23 168.3 16.5 226 59-404 37-286 (319)
89 CHL00203 fabH 3-oxoacyl-acyl-c 99.8 4.1E-18 8.9E-23 167.3 15.7 109 58-170 35-143 (326)
90 TIGR00747 fabH 3-oxoacyl-(acyl 99.8 7.3E-18 1.6E-22 164.8 15.6 217 69-404 45-286 (318)
91 PRK09258 3-oxoacyl-(acyl carri 99.8 1.1E-17 2.4E-22 165.0 16.6 228 71-403 57-305 (338)
92 TIGR02813 omega_3_PfaA polyket 99.8 2.3E-17 5E-22 193.9 21.4 233 76-405 94-393 (2582)
93 cd00830 KAS_III Ketoacyl-acyl 99.8 1.7E-17 3.6E-22 162.2 16.6 215 71-404 46-290 (320)
94 PLN02326 3-oxoacyl-[acyl-carri 99.8 2.4E-17 5.1E-22 165.1 17.5 98 70-170 91-188 (379)
95 PRK12879 3-oxoacyl-(acyl carri 99.7 5E-17 1.1E-21 159.4 17.7 214 71-403 49-291 (325)
96 PRK06816 3-oxoacyl-(acyl carri 99.7 6.4E-17 1.4E-21 162.0 18.6 96 73-170 61-156 (378)
97 PRK07204 3-oxoacyl-(acyl carri 99.7 1E-16 2.2E-21 157.5 18.4 210 72-400 49-293 (329)
98 TIGR00748 HMG_CoA_syn_Arc hydr 99.7 9.5E-17 2.1E-21 158.8 17.8 210 71-403 46-276 (345)
99 cd00827 init_cond_enzymes "ini 99.7 5.7E-17 1.2E-21 158.7 16.1 227 54-403 33-293 (324)
100 PRK07515 3-oxoacyl-(acyl carri 99.7 1.4E-16 3E-21 159.3 18.0 94 74-170 94-187 (372)
101 PRK04262 hypothetical protein; 99.7 2.4E-16 5.3E-21 156.1 16.4 209 71-402 47-276 (347)
102 PRK12880 3-oxoacyl-(acyl carri 99.7 2.4E-16 5.3E-21 156.2 15.2 98 71-170 56-153 (353)
103 COG3321 Polyketide synthase mo 99.7 8.5E-16 1.8E-20 170.4 20.4 233 76-405 92-360 (1061)
104 PRK05963 3-oxoacyl-(acyl carri 99.7 3E-15 6.4E-20 147.0 16.8 97 71-170 48-144 (326)
105 PRK09185 3-oxoacyl-(acyl carri 99.6 1.6E-15 3.6E-20 152.5 14.6 183 115-404 139-331 (392)
106 PRK06840 hypothetical protein; 99.6 6.1E-15 1.3E-19 145.6 17.8 98 71-170 49-148 (339)
107 cd00831 CHS_like Chalcone and 99.6 1.5E-15 3.3E-20 151.2 13.0 218 73-400 83-327 (361)
108 PLN03169 chalcone synthase fam 99.6 5E-15 1.1E-19 148.6 10.5 97 72-170 103-200 (391)
109 PLN03171 chalcone synthase-lik 99.6 3E-14 6.5E-19 143.3 13.6 96 73-170 106-202 (399)
110 PLN03173 chalcone synthase; Pr 99.6 4.6E-14 1E-18 141.4 14.3 94 75-170 102-196 (391)
111 PLN03170 chalcone synthase; Pr 99.6 1.9E-14 4.1E-19 144.7 11.2 94 75-170 106-200 (401)
112 PLN03168 chalcone synthase; Pr 99.6 7.9E-14 1.7E-18 139.8 15.6 95 74-170 100-195 (389)
113 TIGR02845 spore_V_AD stage V s 99.5 7.6E-14 1.7E-18 133.4 14.2 91 72-170 47-137 (327)
114 PLN03172 chalcone synthase fam 99.5 3.9E-14 8.5E-19 142.0 12.2 200 75-383 102-325 (393)
115 TIGR01835 HMG-CoA-S_prok 3-hyd 99.5 6.3E-13 1.4E-17 133.1 17.7 110 51-167 29-138 (379)
116 PRK08304 stage V sporulation p 99.5 5.3E-13 1.2E-17 128.0 14.6 91 72-170 53-143 (337)
117 PLN02854 3-ketoacyl-CoA syntha 99.5 2.9E-12 6.3E-17 131.1 19.5 94 75-170 188-282 (521)
118 PLN02377 3-ketoacyl-CoA syntha 99.4 4E-12 8.7E-17 130.0 17.4 95 74-170 171-266 (502)
119 PLN02577 hydroxymethylglutaryl 99.4 2.4E-12 5.3E-17 130.5 13.4 111 54-170 36-151 (459)
120 PLN02932 3-ketoacyl-CoA syntha 99.4 4.5E-12 9.8E-17 128.9 15.1 94 75-170 148-242 (478)
121 PRK12404 stage V sporulation p 99.3 5.5E-11 1.2E-15 113.6 12.9 83 74-164 53-135 (334)
122 PLN02192 3-ketoacyl-CoA syntha 99.3 1.1E-10 2.3E-15 119.5 15.6 94 75-170 176-270 (511)
123 COG3425 PksG 3-hydroxy-3-methy 99.3 2E-10 4.4E-15 111.9 16.8 210 71-402 47-277 (377)
124 TIGR01833 HMG-CoA-S_euk 3-hydr 99.2 8E-10 1.7E-14 112.2 16.9 108 54-167 33-145 (454)
125 PF00109 ketoacyl-synt: Beta-k 99.2 2.4E-10 5.3E-15 107.9 11.7 94 75-170 87-208 (254)
126 KOG1202 Animal-type fatty acid 99.1 2E-10 4.3E-15 122.4 9.5 227 75-405 87-352 (2376)
127 PLN00415 3-ketoacyl-CoA syntha 99.0 2E-09 4.3E-14 108.7 13.2 96 73-170 131-228 (466)
128 COG3424 BcsA Predicted naringe 98.9 2.5E-08 5.3E-13 93.8 14.6 196 75-380 76-296 (356)
129 PF08392 FAE1_CUT1_RppA: FAE1/ 98.6 2.5E-07 5.5E-12 87.8 11.7 94 75-170 83-177 (290)
130 PF07451 SpoVAD: Stage V sporu 98.5 2.5E-06 5.5E-11 80.7 12.5 108 50-165 9-133 (329)
131 PF00195 Chal_sti_synt_N: Chal 98.2 9.7E-06 2.1E-10 74.9 9.8 95 74-170 99-194 (226)
132 COG0183 PaaJ Acetyl-CoA acetyl 98.2 4.2E-07 9.2E-12 91.5 0.3 110 260-380 189-312 (392)
133 PF01154 HMG_CoA_synt_N: Hydro 98.1 7.6E-06 1.7E-10 72.1 6.9 96 71-167 49-148 (174)
134 PF02801 Ketoacyl-synt_C: Beta 97.8 5.1E-05 1.1E-09 63.3 6.0 88 317-404 1-101 (119)
135 PF08545 ACP_syn_III: 3-Oxoacy 97.1 0.00066 1.4E-08 52.4 4.3 39 132-170 1-39 (80)
136 PF08541 ACP_syn_III_C: 3-Oxoa 96.2 0.0038 8.3E-08 49.1 2.6 58 345-404 1-58 (90)
137 PF13723 Ketoacyl-synt_2: Beta 91.0 2.2 4.8E-05 39.4 10.0 92 74-172 33-147 (218)
138 PRK08257 acetyl-CoA acetyltran 90.5 1.5 3.4E-05 45.7 9.6 107 50-164 266-382 (498)
139 PF02801 Ketoacyl-synt_C: Beta 88.2 0.99 2.1E-05 37.3 5.0 101 53-156 3-111 (119)
140 PF08541 ACP_syn_III_C: 3-Oxoa 87.8 0.74 1.6E-05 35.9 3.9 75 87-167 1-79 (90)
141 TIGR00748 HMG_CoA_syn_Arc hydr 87.7 1.5 3.3E-05 43.4 6.9 85 75-167 206-296 (345)
142 cd00825 decarbox_cond_enzymes 87.4 5.8 0.00013 38.4 10.8 79 76-155 204-286 (332)
143 PRK06816 3-oxoacyl-(acyl carri 86.4 3 6.6E-05 41.8 8.3 81 79-168 274-366 (378)
144 PRK09185 3-oxoacyl-(acyl carri 86.3 4.6 0.0001 40.7 9.6 100 50-156 236-341 (392)
145 cd00327 cond_enzymes Condensin 85.3 9 0.0002 35.5 10.5 89 75-165 143-243 (254)
146 COG3424 BcsA Predicted naringe 85.3 0.9 2E-05 43.7 3.5 64 338-405 81-150 (356)
147 cd00829 SCP-x_thiolase Thiolas 84.9 8 0.00017 38.5 10.5 108 50-164 225-363 (375)
148 PRK06158 thiolase; Provisional 84.6 3 6.6E-05 41.9 7.3 64 317-381 9-77 (384)
149 COG0332 FabH 3-oxoacyl-[acyl-c 84.3 1.1 2.4E-05 43.9 3.9 42 338-379 57-103 (323)
150 PRK06064 acetyl-CoA acetyltran 83.4 9.4 0.0002 38.4 10.3 108 50-164 232-372 (389)
151 PRK07204 3-oxoacyl-(acyl carri 82.8 4 8.7E-05 39.8 7.2 81 79-165 232-316 (329)
152 PRK06519 3-oxoacyl-(acyl carri 82.8 3.9 8.4E-05 41.4 7.2 78 78-157 281-359 (398)
153 PRK05963 3-oxoacyl-(acyl carri 82.0 4.1 9E-05 39.7 7.0 84 77-166 227-314 (326)
154 cd00832 CLF Chain-length facto 81.8 8.9 0.00019 38.8 9.5 96 53-156 252-352 (399)
155 TIGR03150 fabF beta-ketoacyl-a 81.6 6.9 0.00015 39.3 8.6 100 52-156 253-359 (407)
156 PLN02932 3-ketoacyl-CoA syntha 81.2 1.5 3.2E-05 45.4 3.6 49 338-386 153-207 (478)
157 PRK14691 3-oxoacyl-(acyl carri 80.8 12 0.00027 37.0 9.8 100 52-156 184-289 (342)
158 PF00195 Chal_sti_synt_N: Chal 80.7 0.99 2.1E-05 41.9 1.9 60 338-403 105-172 (226)
159 PRK07937 lipid-transfer protei 80.3 16 0.00036 36.2 10.6 103 50-164 225-334 (352)
160 PRK04262 hypothetical protein; 80.1 3.5 7.5E-05 40.8 5.7 83 77-167 209-297 (347)
161 PRK07855 lipid-transfer protei 80.0 5.7 0.00012 40.0 7.3 61 318-379 6-70 (386)
162 PRK09050 beta-ketoadipyl CoA t 79.8 8.5 0.00018 39.0 8.5 96 52-162 280-384 (401)
163 cd00834 KAS_I_II Beta-ketoacyl 79.7 11 0.00023 37.9 9.2 79 77-156 275-359 (406)
164 PRK07314 3-oxoacyl-(acyl carri 79.2 7.9 0.00017 39.1 8.1 100 52-156 254-360 (411)
165 PRK09258 3-oxoacyl-(acyl carri 79.1 7 0.00015 38.2 7.5 83 77-167 239-327 (338)
166 COG1214 Inactive homolog of me 79.0 3.2 7E-05 38.4 4.7 77 74-163 36-116 (220)
167 PRK08256 lipid-transfer protei 79.0 17 0.00037 36.5 10.4 98 50-153 235-358 (391)
168 PLN02192 3-ketoacyl-CoA syntha 78.4 1.8 3.9E-05 45.1 3.1 49 338-386 181-235 (511)
169 PRK06289 acetyl-CoA acetyltran 78.3 24 0.00053 35.6 11.3 97 52-154 247-371 (403)
170 PRK06066 acetyl-CoA acetyltran 78.2 19 0.00041 36.3 10.3 97 50-154 231-353 (385)
171 PLN02377 3-ketoacyl-CoA syntha 78.0 1.8 3.9E-05 45.1 3.0 49 338-386 177-231 (502)
172 TIGR00747 fabH 3-oxoacyl-(acyl 78.0 4.1 8.9E-05 39.5 5.4 78 79-165 221-305 (318)
173 PRK05952 3-oxoacyl-(acyl carri 77.8 12 0.00025 37.8 8.7 98 52-156 232-335 (381)
174 KOG1393 Hydroxymethylglutaryl- 77.5 13 0.00028 37.0 8.4 107 51-163 40-153 (462)
175 PLN02326 3-oxoacyl-[acyl-carri 77.4 7.4 0.00016 39.0 7.2 81 79-165 282-366 (379)
176 COG0304 FabB 3-oxoacyl-(acyl-c 77.1 8.4 0.00018 39.2 7.4 99 52-155 254-359 (412)
177 PF08392 FAE1_CUT1_RppA: FAE1/ 77.0 4.3 9.3E-05 39.1 5.0 49 338-386 88-142 (290)
178 PRK06147 3-oxoacyl-(acyl carri 76.5 5.4 0.00012 39.5 5.9 88 77-165 234-329 (348)
179 PRK08722 3-oxoacyl-(acyl carri 76.4 18 0.0004 36.7 9.8 77 78-156 279-363 (414)
180 TIGR02430 pcaF beta-ketoadipyl 76.1 12 0.00026 37.9 8.3 98 51-162 278-383 (400)
181 CHL00203 fabH 3-oxoacyl-acyl-c 76.1 5.6 0.00012 38.9 5.8 81 79-165 228-312 (326)
182 PRK12578 acetyl-CoA acetyltran 75.9 16 0.00034 36.7 9.1 97 50-153 231-351 (385)
183 TIGR01930 AcCoA-C-Actrans acet 75.6 12 0.00026 37.6 8.2 97 52-163 269-372 (386)
184 PLN03168 chalcone synthase; Pr 75.2 3 6.4E-05 42.1 3.6 43 338-380 106-152 (389)
185 smart00825 PKS_KS Beta-ketoacy 74.8 23 0.00051 35.7 10.2 100 53-157 258-367 (424)
186 PLN03170 chalcone synthase; Pr 74.4 3.6 7.8E-05 41.7 4.0 43 338-380 111-157 (401)
187 PRK06840 hypothetical protein; 74.4 11 0.00024 37.0 7.4 77 79-165 239-322 (339)
188 PLN03169 chalcone synthase fam 74.4 3.2 6.9E-05 41.9 3.6 43 338-380 111-157 (391)
189 PRK12404 stage V sporulation p 74.3 3.7 8.1E-05 40.1 3.9 40 338-379 59-102 (334)
190 PRK06333 3-oxoacyl-(acyl carri 74.3 18 0.00038 36.8 9.1 100 52-156 266-371 (424)
191 PRK13359 beta-ketoadipyl CoA t 74.2 14 0.00031 37.4 8.3 97 52-162 279-383 (400)
192 PRK08142 acetyl-CoA acetyltran 74.2 11 0.00024 38.0 7.4 64 318-382 7-75 (388)
193 PRK06445 acetyl-CoA acetyltran 73.9 26 0.00056 35.4 10.1 97 52-163 275-378 (394)
194 cd00833 PKS polyketide synthas 73.8 19 0.00041 36.2 9.2 103 52-159 257-369 (421)
195 PLN03171 chalcone synthase-lik 73.3 3.7 8E-05 41.6 3.8 43 338-380 113-159 (399)
196 PLN02836 3-oxoacyl-[acyl-carri 73.3 21 0.00045 36.6 9.3 99 52-156 277-385 (437)
197 PTZ00050 3-oxoacyl-acyl carrie 73.2 23 0.00049 36.1 9.6 99 53-156 262-369 (421)
198 PRK08313 acetyl-CoA acetyltran 72.2 7.3 0.00016 39.2 5.6 64 318-381 5-78 (386)
199 cd00828 elong_cond_enzymes "el 72.0 17 0.00038 36.5 8.4 98 53-156 254-358 (407)
200 PRK06065 acetyl-CoA acetyltran 71.9 8.4 0.00018 38.9 6.0 64 318-381 11-83 (392)
201 PRK05790 putative acyltransfer 71.8 19 0.00041 36.2 8.6 78 79-163 293-377 (393)
202 PLN03173 chalcone synthase; Pr 71.5 4.8 0.0001 40.6 4.1 43 338-380 107-153 (391)
203 PRK12879 3-oxoacyl-(acyl carri 71.4 11 0.00025 36.5 6.7 79 79-166 227-312 (325)
204 PRK07515 3-oxoacyl-(acyl carri 71.2 8.5 0.00018 38.4 5.8 80 78-165 272-358 (372)
205 PLN03172 chalcone synthase fam 71.2 5.3 0.00012 40.4 4.4 43 338-380 107-153 (393)
206 cd00830 KAS_III Ketoacyl-acyl 71.1 11 0.00023 36.5 6.4 83 77-165 223-309 (320)
207 PRK12880 3-oxoacyl-(acyl carri 70.1 4.5 9.8E-05 40.2 3.5 42 338-379 65-111 (353)
208 PLN00415 3-ketoacyl-CoA syntha 69.8 5.1 0.00011 41.3 3.9 49 338-386 139-193 (466)
209 TIGR02845 spore_V_AD stage V s 69.8 3.8 8.1E-05 40.1 2.8 42 338-379 55-98 (327)
210 PRK07103 polyketide beta-ketoa 69.2 24 0.00051 35.8 8.6 96 52-156 261-362 (410)
211 PTZ00455 3-ketoacyl-CoA thiola 69.2 31 0.00067 35.4 9.5 94 51-153 285-403 (438)
212 PRK06365 acetyl-CoA acetyltran 69.1 16 0.00036 37.3 7.5 45 338-382 42-92 (430)
213 PRK08304 stage V sporulation p 68.7 4.1 8.8E-05 40.0 2.8 41 338-378 61-103 (337)
214 PRK07516 acetyl-CoA acetyltran 68.6 30 0.00066 34.7 9.2 96 50-153 235-354 (389)
215 PRK06157 acetyl-CoA acetyltran 68.3 54 0.0012 33.1 11.0 71 50-127 238-312 (398)
216 PRK07910 3-oxoacyl-(acyl carri 68.2 31 0.00066 35.2 9.2 99 52-156 264-368 (418)
217 PLN02787 3-oxoacyl-[acyl-carri 68.2 13 0.00027 39.3 6.5 76 79-156 407-488 (540)
218 TIGR03725 bact_YeaZ universal 67.5 5.9 0.00013 36.0 3.5 58 73-135 31-92 (202)
219 cd00826 nondecarbox_cond_enzym 67.0 0.57 1.2E-05 47.3 -3.6 43 195-238 146-191 (393)
220 PRK06690 acetyl-CoA acetyltran 66.9 17 0.00038 36.2 6.9 77 78-161 259-342 (361)
221 PRK09051 beta-ketothiolase; Pr 66.8 36 0.00078 34.4 9.3 96 52-162 275-377 (394)
222 PLN02854 3-ketoacyl-CoA syntha 65.6 5.5 0.00012 41.7 3.2 48 339-386 194-247 (521)
223 PRK09116 3-oxoacyl-(acyl carri 65.3 33 0.00072 34.7 8.8 95 53-156 256-356 (405)
224 PRK09352 3-oxoacyl-(acyl carri 65.1 19 0.0004 34.8 6.7 81 79-165 221-305 (319)
225 PRK09052 acetyl-CoA acetyltran 63.9 34 0.00075 34.6 8.5 96 52-162 280-382 (399)
226 PRK07661 acetyl-CoA acetyltran 61.1 31 0.00068 34.8 7.6 96 52-162 272-374 (391)
227 PRK06025 acetyl-CoA acetyltran 59.8 23 0.00049 36.1 6.3 67 80-154 318-392 (417)
228 cd00751 thiolase Thiolase are 57.5 13 0.00027 37.4 4.1 42 338-379 27-73 (386)
229 PF02803 Thiolase_C: Thiolase, 56.9 22 0.00049 29.7 4.8 77 79-163 24-108 (123)
230 PF00814 Peptidase_M22: Glycop 56.9 7.6 0.00016 37.0 2.3 59 74-136 28-89 (268)
231 PRK07850 acetyl-CoA acetyltran 56.7 74 0.0016 32.0 9.4 78 78-162 286-370 (387)
232 PRK06059 lipid-transfer protei 55.0 53 0.0012 33.1 8.2 70 79-154 275-368 (399)
233 PRK06205 acetyl-CoA acetyltran 54.0 38 0.00083 34.3 6.9 78 79-163 300-387 (404)
234 TIGR00329 gcp_kae1 metallohydr 53.8 15 0.00032 35.7 3.7 58 74-136 47-108 (305)
235 PRK06501 3-oxoacyl-(acyl carri 53.3 26 0.00056 35.7 5.6 77 78-156 290-373 (425)
236 PRK08170 acetyl-CoA acetyltran 52.8 19 0.00041 36.8 4.5 42 338-379 32-78 (426)
237 PRK07851 acetyl-CoA acetyltran 51.5 46 0.00099 33.8 7.0 96 52-162 286-388 (406)
238 PRK08235 acetyl-CoA acetyltran 51.4 43 0.00093 33.8 6.8 77 79-162 293-376 (393)
239 PRK08242 acetyl-CoA acetyltran 50.3 46 0.00099 33.8 6.7 75 80-162 303-385 (402)
240 PRK05656 acetyl-CoA acetyltran 49.5 42 0.00091 33.8 6.4 78 79-163 293-377 (393)
241 PRK08947 fadA 3-ketoacyl-CoA t 49.2 1.7E+02 0.0037 29.4 10.7 98 52-163 265-371 (387)
242 TIGR03723 bact_gcp putative gl 48.9 20 0.00043 35.1 3.8 58 74-136 48-109 (314)
243 PRK14878 UGMP family protein; 48.3 28 0.00061 34.1 4.8 57 76-136 45-104 (323)
244 TIGR03722 arch_KAE1 universal 46.3 26 0.00057 34.2 4.2 57 76-136 46-105 (322)
245 PRK09604 UGMP family protein; 46.0 25 0.00054 34.6 4.0 58 74-136 50-111 (332)
246 cd00831 CHS_like Chalcone and 44.7 46 0.001 32.9 5.7 82 78-165 260-350 (361)
247 COG0533 QRI7 Metal-dependent p 41.6 42 0.00091 33.1 4.7 58 74-136 49-110 (342)
248 PTZ00340 O-sialoglycoprotein e 41.5 31 0.00067 34.3 3.8 59 74-136 48-109 (345)
249 PLN02287 3-ketoacyl-CoA thiola 41.3 69 0.0015 33.1 6.5 68 79-154 333-408 (452)
250 PRK06504 acetyl-CoA acetyltran 41.3 92 0.002 31.4 7.3 78 77-162 288-373 (390)
251 PRK08131 acetyl-CoA acetyltran 41.0 1.1E+02 0.0025 30.9 7.9 89 52-154 279-375 (401)
252 PRK06366 acetyl-CoA acetyltran 40.8 78 0.0017 31.8 6.7 76 79-162 287-370 (388)
253 cd00827 init_cond_enzymes "ini 40.4 30 0.00065 33.3 3.6 41 338-378 53-98 (324)
254 KOG2708 Predicted metalloprote 39.9 49 0.0011 30.8 4.5 29 75-103 49-77 (336)
255 COG2971 Predicted N-acetylgluc 38.3 3.9E+02 0.0083 26.0 10.7 137 74-221 46-200 (301)
256 PLN02644 acetyl-CoA C-acetyltr 38.2 59 0.0013 32.8 5.4 76 80-162 294-376 (394)
257 COG3360 Uncharacterized conser 37.8 27 0.00058 25.8 2.0 27 336-362 18-44 (71)
258 TIGR02445 fadA fatty oxidation 36.7 1.4E+02 0.0031 29.9 7.9 78 79-162 282-368 (385)
259 TIGR01835 HMG-CoA-S_prok 3-hyd 36.7 37 0.00081 34.0 3.7 40 338-379 54-98 (379)
260 TIGR02813 omega_3_PfaA polyket 36.7 1.6E+02 0.0034 37.5 9.4 100 53-157 294-403 (2582)
261 KOG1394 3-oxoacyl-(acyl-carrie 35.4 50 0.0011 32.8 4.1 46 78-125 302-348 (440)
262 PF01890 CbiG_C: Cobalamin syn 35.1 62 0.0013 26.8 4.2 59 52-125 1-59 (121)
263 COG5441 Uncharacterized conser 35.1 1.9E+02 0.0042 28.1 7.8 96 49-164 2-99 (401)
264 PRK08439 3-oxoacyl-(acyl carri 34.7 2.9E+02 0.0063 27.8 9.8 76 77-156 274-356 (406)
265 PF04422 FrhB_FdhB_N: Coenzyme 34.5 62 0.0013 24.8 3.8 32 134-165 13-44 (82)
266 PRK07801 acetyl-CoA acetyltran 33.8 1.3E+02 0.0027 30.2 7.0 77 80-163 283-366 (382)
267 TIGR02446 FadI fatty oxidation 31.1 1.8E+02 0.0038 29.8 7.6 23 80-102 314-336 (430)
268 PRK09605 bifunctional UGMP fam 30.9 47 0.001 34.9 3.4 51 75-125 48-101 (535)
269 PF07451 SpoVAD: Stage V sporu 30.7 46 0.001 32.4 3.0 83 82-167 208-306 (329)
270 PRK07027 cobalamin biosynthesi 30.1 95 0.0021 25.9 4.5 59 53-126 4-62 (126)
271 PRK06954 acetyl-CoA acetyltran 28.2 80 0.0017 31.9 4.4 23 338-360 36-58 (397)
272 PF02797 Chal_sti_synt_C: Chal 27.0 89 0.0019 27.0 3.9 43 338-380 43-85 (151)
273 PLN02577 hydroxymethylglutaryl 26.6 40 0.00086 34.9 1.9 41 338-378 58-106 (459)
274 PF03880 DbpA: DbpA RNA bindin 25.9 39 0.00083 25.3 1.3 34 334-367 12-45 (74)
275 PRK06633 acetyl-CoA acetyltran 25.2 82 0.0018 31.8 3.9 42 338-379 32-78 (392)
276 KOG2708 Predicted metalloprote 23.9 53 0.0012 30.6 2.0 23 339-361 55-77 (336)
277 TIGR03285 methan_mark_14 putat 23.7 1.3E+02 0.0027 30.1 4.6 36 70-105 60-95 (445)
278 TIGR02714 amido_AtzD_TrzD ring 23.6 96 0.0021 30.5 3.7 50 52-103 110-160 (366)
279 PRK07108 acetyl-CoA acetyltran 22.2 48 0.001 33.5 1.5 42 338-379 32-79 (392)
280 KOG2707 Predicted metalloprote 22.0 1.1E+02 0.0024 30.4 3.8 46 79-125 86-135 (405)
281 COG3425 PksG 3-hydroxy-3-methy 21.2 3.6E+02 0.0078 27.1 7.3 92 67-165 199-297 (377)
282 PRK09268 acetyl-CoA acetyltran 21.1 3.7E+02 0.0079 27.5 7.7 26 78-103 310-335 (427)
283 COG0533 QRI7 Metal-dependent p 20.8 79 0.0017 31.3 2.6 23 339-361 56-78 (342)
284 PF09663 Amido_AtzD_TrzD: Amid 20.3 80 0.0017 31.1 2.5 24 338-361 135-159 (365)
285 PRK08963 fadI 3-ketoacyl-CoA t 20.2 3.3E+02 0.0072 27.7 7.2 24 79-102 311-334 (428)
No 1
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.5e-89 Score=625.60 Aligned_cols=390 Identities=80% Similarity=1.228 Sum_probs=372.1
Q ss_pred HHHHHHHHHhhcCCCCCCCccchhhhhhcccccCCcccccccccCCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHH
Q 015474 4 AINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL 83 (406)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~ 83 (406)
||+|+|.+++||++++. .+.++.++|.++.+.+|+ +|||||++.|||++|.++|.|+++.+++|+..++
T Consensus 1 ~~er~~~ll~hl~~~s~-----s~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl 69 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSS-----SASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVL 69 (435)
T ss_pred CchHHHHHHHhcCCccc-----ccccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHH
Confidence 57899999999988665 477899999999988865 7999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEE
Q 015474 84 KAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (406)
Q Consensus 84 ~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~ 163 (406)
++.+++.+++|++|+.|++|+++.++. +...+|+.+++.|+|.++|+.+||++|+||++|+...+..|++|.+|+.|++
T Consensus 70 ~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~ 148 (435)
T KOG1389|consen 70 RAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAA 148 (435)
T ss_pred HHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeeccc
Confidence 999999999999999999999999988 6788999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCC-CCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceee
Q 015474 164 GLESMTVN-PMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242 (406)
Q Consensus 164 G~E~ms~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~ 242 (406)
|+|+|+.. |..|-..+...+..++.+.+|+.+||.++|+++++||+||+++|+||+.||++|+.+.+.|.|++||+|++
T Consensus 149 GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~ 228 (435)
T KOG1389|consen 149 GVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVK 228 (435)
T ss_pred chhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeee
Confidence 99999985 44444456666778888999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEE
Q 015474 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 322 (406)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g 322 (406)
.|..||+ |.+|+.+++.||++|+.+|++.|.++||+|.+||++|++|+||++|||+||+|+.+..|.++|+++++++..
T Consensus 229 tkv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~ 307 (435)
T KOG1389|consen 229 TKVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRD 307 (435)
T ss_pred eeccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeee
Confidence 9999987 888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHH
Q 015474 323 FAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCC 402 (406)
Q Consensus 323 ~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~ 402 (406)
+...+++|.+||+||+.||+++|+.+||..+|||+||+||+|++|.++|.+.|||++++||++||++++|||+||||+|+
T Consensus 308 f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~ 387 (435)
T KOG1389|consen 308 FAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARC 387 (435)
T ss_pred eeeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC
Q 015474 403 SNCL 406 (406)
Q Consensus 403 v~~l 406 (406)
|++|
T Consensus 388 VaTl 391 (435)
T KOG1389|consen 388 VATL 391 (435)
T ss_pred HHHH
Confidence 9875
No 2
>PLN02287 3-ketoacyl-CoA thiolase
Probab=100.00 E-value=2.7e-78 Score=611.82 Aligned_cols=402 Identities=86% Similarity=1.306 Sum_probs=354.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCCCccchhhhhhcccccCCcccccccccCCCceEEEEeeecccccCCCCCCCCCCHHHHHH
Q 015474 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLA 80 (406)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~ 80 (406)
||++++|.+.+++|++++++- ...|+.+.|+++++++|||.-...++|||||++||||+|...+.+++.++.+|+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~ 76 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSSE----PSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLA 76 (452)
T ss_pred CchHHHHHHHHHhhccCCCCC----ccccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHH
Confidence 899999999999999885542 4468889999999999999998889999999999999985467888999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEE
Q 015474 81 PVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (406)
Q Consensus 81 ~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~v 160 (406)
+|++++|+|+||+++|||.+++|++.+...+..+.++.++..+|++...|+++|+++|+||+.++..|++.|++|.+|++
T Consensus 77 eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvv 156 (452)
T PLN02287 77 PVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 156 (452)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeE
Confidence 99999999999999999999999987665544567788999999975689999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccce
Q 015474 161 IGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240 (406)
Q Consensus 161 L~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p 240 (406)
|++|+|+||..|..++..+...+.......+...+||+++++||++||+|||++++|++++|+||.+||++|+|+++|+|
T Consensus 157 Lv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~p 236 (452)
T PLN02287 157 IGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236 (452)
T ss_pred EEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceee
Confidence 99999999987743221121111110101123457999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEE
Q 015474 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 320 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i 320 (406)
+.++..+++++++++.+++.||.+|+++++|+|.++||+|+|+|++|++|||+++|||+|+||++++.|++++.+|++++
T Consensus 237 v~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~ 316 (452)
T PLN02287 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316 (452)
T ss_pred eeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEE
Confidence 98754322334444567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHH
Q 015474 321 RTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGN 400 (406)
Q Consensus 321 ~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~ 400 (406)
.+++..+.+|..++.++..+++++|+++||+++|||++|+||+|+++++.++|+||||+.|||++||++++|||+||||+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~ 396 (452)
T PLN02287 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGA 396 (452)
T ss_pred EEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHH
Confidence 99887777787777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhC
Q 015474 401 CCSNCL 406 (406)
Q Consensus 401 ~~v~~l 406 (406)
+|++||
T Consensus 397 ~~v~~l 402 (452)
T PLN02287 397 RCVATL 402 (452)
T ss_pred HHHHHH
Confidence 999885
No 3
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=4.8e-73 Score=566.20 Aligned_cols=347 Identities=39% Similarity=0.602 Sum_probs=312.8
Q ss_pred CCceEEEEeeecccccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKS-KRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~-~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|++||||++.||||+|. +.|+|+++++.+|+.+|++++|+++|++|++||.+++|++.+...++.+.++.++..+|+|.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 57899999999999984 57999999999999999999999999999999999999999865545788999999999987
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-CCCCC-hhhhhhhhhhccCcchHHHHHHHHH
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-EGSVN-PKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
++|+++||++|+||++||..|++.|++|.+|++|++|+|+||+.|+.. +..+. +.+. ...+...+||.++|+|++
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~---~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPST---NFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCccc---ccccccCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999988522 11110 0000 001234579999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC---
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--- 282 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~--- 282 (406)
+||+|||+||+||++||+||.++++.|+|++||+||+. + +| ..++++||++|+++|+|+|.++||+|+|
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~-~~---~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~ 229 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----Q-NG---LTILDHDEHMRPGTTMESLAKLKPSFAMMGE 229 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----C-CC---CEeeCCCCCCCCCCCHHHHhCCCCCccCccc
Confidence 99999999999999999999999999999999999972 1 12 2568999999999999999999999998
Q ss_pred -CC-----------------CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHH
Q 015474 283 -DG-----------------TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAA 344 (406)
Q Consensus 283 -~g-----------------~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~a 344 (406)
+| ++|++|||+++|||+|+||++++.|++++++|+++|++++..+.+|..++.++..+++++
T Consensus 230 ~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~a 309 (402)
T PRK08242 230 MGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKA 309 (402)
T ss_pred cCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHH
Confidence 44 589999999999999999999999999999999999999998888888888999999999
Q ss_pred HHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 345 VKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 345 l~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+++||+++|||+||+||+|+++++.++|+||||++|+|++||++++|||+||||++++++|
T Consensus 310 l~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l 371 (402)
T PRK08242 310 LAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTV 371 (402)
T ss_pred HHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 4
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-72 Score=561.28 Aligned_cols=351 Identities=36% Similarity=0.534 Sum_probs=310.3
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.++++++.+|+.++++++|+|+||++++||.+++|++.+...++.+++|.+.+..|||.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~ 79 (390)
T PRK06504 1 MAEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPES 79 (390)
T ss_pred CCceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 4689999999999998 679999999999999999999999999999999999999986554456889999999999889
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC------CCChhhhhhhhhh--ccCcchHHHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVNPKVKAFEQAQ--NCLLPMGVTS 200 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~------~~~~~~~~~~~~~--~~~~~~g~~a 200 (406)
+|+++|+++|+||++|+..|++.|++|.+|++|++|+|+||+.|+.... .+........... ....+|+.++
T Consensus 80 vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 159 (390)
T PRK06504 80 VPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGA 159 (390)
T ss_pred CceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999987741110 1111000000011 1134789999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcc
Q 015474 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280 (406)
Q Consensus 201 ~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~ 280 (406)
++|+++||+|||+||+||++||+||.+||++|+|++||+|++++.+ + ..+.+++.||++|+++|+|+|+++||++
T Consensus 160 e~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~---~--~~~~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 160 EMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRA---D--GSGEMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCC---C--CCceEEccCCCCCCCCCHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999987532 1 1345789999999999999999999996
Q ss_pred cCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEc
Q 015474 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (406)
Q Consensus 281 ~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~ 360 (406)
+ .|++|++|||+++|||+|+||+|++.|++++.+|..+|.+++..+.+|..+..++..|++++|+++||+++|||++|+
T Consensus 235 ~-~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 235 E-GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred C-CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4 489999999999999999999999999999999988999888877777778889999999999999999999999999
Q ss_pred cccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 361 hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
||+|+++++.++|+||||++|||++||++++|||+||||++|+.+|
T Consensus 314 ~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l 359 (390)
T PRK06504 314 NEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTL 359 (390)
T ss_pred cccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875
No 5
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.6e-72 Score=556.10 Aligned_cols=350 Identities=36% Similarity=0.496 Sum_probs=316.1
Q ss_pred CCceEEEEeeecccc--cCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC
Q 015474 49 GDDVVIVAAYRTALC--KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~--r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~ 126 (406)
|++||||++.||||+ |.+.|+|+++++.+|+..+++++|++++++|++||.|++|++++.+.++.+++|++++.+|||
T Consensus 1 m~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp 80 (417)
T PRK06025 1 MAEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYD 80 (417)
T ss_pred CCceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCC
Confidence 468999999999999 855799999999999999999999999999999999999999988766789999999999999
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCC--C--CCChhhhhh--hh--hhccCcchHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G--SVNPKVKAF--EQ--AQNCLLPMGV 198 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~--~--~~~~~~~~~--~~--~~~~~~~~g~ 198 (406)
.++|+++||+.|+||++||..|++.|++|++|++|++|+|+||+.|+... . .....+.+. +. ..+...+||.
T Consensus 81 ~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~ 160 (417)
T PRK06025 81 IKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGV 160 (417)
T ss_pred CCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHH
Confidence 99999999999999999999999999999999999999999999986211 0 111111110 10 1122458999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
++|+++++||||||+||+||++||++|.+++++|+|++||+||+. + ++ .++++.||++|+++|+|+|.++||
T Consensus 161 ~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~--~---~~---~~~~~~De~~R~~~t~e~la~L~p 232 (417)
T PRK06025 161 CGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR--D---DG---SVALDHEEFPRPQTTAEGLAALKP 232 (417)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc--C---CC---CEEecCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999972 1 12 256999999999999999999999
Q ss_pred ccc--------CCCC------------------cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC
Q 015474 279 VFK--------KDGT------------------TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 332 (406)
Q Consensus 279 ~~~--------~~g~------------------lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~ 332 (406)
+|+ ++|+ +|++|||+++|||+|+||+|++.|++++.+|+++|++++..+.+|..
T Consensus 233 ~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~ 312 (417)
T PRK06025 233 AFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL 312 (417)
T ss_pred CccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh
Confidence 997 4787 89999999999999999999999999999999999999999888988
Q ss_pred CCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 333 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 333 ~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++.++..+++++|+++|++++|||+||+||+|+.+.+.+++.||++++|+|++||++++|||+|+||++++++|
T Consensus 313 ~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~l 386 (417)
T PRK06025 313 MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTV 386 (417)
T ss_pred hcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999874
No 6
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.2e-72 Score=562.29 Aligned_cols=341 Identities=35% Similarity=0.545 Sum_probs=305.0
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.++++++|+|+||++++||.+++|++.+... +.++++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~ 78 (388)
T PRK06366 1 MKDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFG 78 (388)
T ss_pred CCcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCC
Confidence 4689999999999998 568888999999999999999999999999999999999876654 56778999999999766
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC------CCCC----Chhhhh--hhhh-hc--cC
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW------EGSV----NPKVKA--FEQA-QN--CL 193 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~------~~~~----~~~~~~--~~~~-~~--~~ 193 (406)
+|.++++++|+||+.++..|+++|++|++|++|++|+|+|++.|... +..+ ...+.. .+.+ .+ ..
T Consensus 79 ~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 158 (388)
T PRK06366 79 VTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYF 158 (388)
T ss_pred CcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccC
Confidence 89999999999999999999999999999999999999999765421 1100 001111 0111 11 13
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh
Q 015474 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (406)
Q Consensus 194 ~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l 273 (406)
..|++.+++||++||+|||++++|++++|+||.+||++|+|++||+|+.. ++.||++| ++|+|+|
T Consensus 159 ~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~ 223 (388)
T PRK06366 159 EHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDL 223 (388)
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHH
Confidence 45899999999999999999999999999999999999999999999741 67899999 7999999
Q ss_pred hhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCC
Q 015474 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (406)
Q Consensus 274 ~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 353 (406)
+++||+|+|+|++|++|||+++|||+|+||+|+++|++++.+|+++|++++..+.+|..+..+++.|++++|+++||+++
T Consensus 224 ~~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~ 303 (388)
T PRK06366 224 AKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSID 303 (388)
T ss_pred hhCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999999999999998888888888889999999999999999
Q ss_pred CccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 354 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 354 DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|||++|+||+|++++++++|+|||+.+|||++||+|++|||+||||++|++||
T Consensus 304 DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l 356 (388)
T PRK06366 304 YYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTL 356 (388)
T ss_pred HcceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHH
Confidence 99999999999999999999999998999999999999999999999999985
No 7
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.9e-72 Score=558.09 Aligned_cols=362 Identities=47% Similarity=0.685 Sum_probs=318.3
Q ss_pred cccCCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCeEEEEeecCCCCCCccHHHHHHHHc
Q 015474 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA 123 (406)
Q Consensus 45 ~~~~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dA-gl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~l 123 (406)
|++.|++|||||++||||+|.+.|.|++.++.+|+.+|++++|+++ |+++++||.+++|++.++..++.+.++.+...+
T Consensus 1 ~~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~ 80 (399)
T PRK09052 1 MSKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLA 80 (399)
T ss_pred CCCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHc
Confidence 5667899999999999999844689999999999999999999997 999999999999998877655678888888889
Q ss_pred CCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhhhccCcchHHHHHH
Q 015474 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQAQNCLLPMGVTSEN 202 (406)
Q Consensus 124 Gl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (406)
|++..+|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.... .....+++.+........|++++++
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 997558999999999999999999999999999999999999999987741100 1111121111111112479999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCC--CCC--CCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK--TGD--EKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~--~~~--~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
|+++||+|||++|+|+++||+||.+||++|+|++||+|+++....+. +|. .+..++..|+++|+++|+|+|.++||
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 99999999999999999999999999999999999999987532110 121 13356899999999999999999999
Q ss_pred cccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 015474 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (406)
Q Consensus 279 ~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~ 358 (406)
+|+|+|++|.+|||+++|||+++||++++.|++++.+|+++|++++..+++|..++.++..|++++|+++||+++|||++
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~ 320 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWI 320 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99998999999999999999999999999999999999999999999998898888899999999999999999999999
Q ss_pred EccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 359 e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+||+|+++++.++|.||||+.|||++||++++|||+||||+++++++
T Consensus 321 ei~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~ 368 (399)
T PRK09052 321 ELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATV 368 (399)
T ss_pred EeCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999874
No 8
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=100.00 E-value=1.4e-71 Score=556.26 Aligned_cols=351 Identities=38% Similarity=0.561 Sum_probs=312.4
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~d-Agl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|++|||||++||||+| ++|.+++.++.+|+.++++++|++ +|+++++||.+++|++.+...++.+++|.+++.+|||.
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~ 79 (400)
T PRK13359 1 MTEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPH 79 (400)
T ss_pred CCcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCC
Confidence 5689999999999999 679999999999999999999995 69999999999999998776546899999999999987
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC--C-CCCC--Chhhhhh--------hh--hhcc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--W-EGSV--NPKVKAF--------EQ--AQNC 192 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~--~-~~~~--~~~~~~~--------~~--~~~~ 192 (406)
++|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+. . +..+ ...+++. +. +...
T Consensus 80 ~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T PRK13359 80 GVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYG 159 (400)
T ss_pred CCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccc
Confidence 89999999999999999999999999999999999999999998841 1 1111 1111110 11 1122
Q ss_pred CcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhh
Q 015474 193 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 272 (406)
Q Consensus 193 ~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~ 272 (406)
...||.++|+++++||+|||++|+|+++||+++..+...|+|++||+|++++.+ ++ ...+++.||.+|+ +|+|+
T Consensus 160 ~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~De~~r~-~t~e~ 233 (400)
T PRK13359 160 VDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQK---KG--DPLVVSRDEHPRE-TTLEA 233 (400)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccC---CC--CceeecCCCCCCC-CCHHH
Confidence 457999999999999999999999999999987777777899999999987531 12 2257999999997 99999
Q ss_pred hhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCC
Q 015474 273 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 352 (406)
Q Consensus 273 l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~ 352 (406)
|.++||+|+|+|++|++|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||++
T Consensus 234 l~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~ 313 (400)
T PRK13359 234 LAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTL 313 (400)
T ss_pred HhcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999999999999999999999999999888888888899999999999999999
Q ss_pred CCccEEEccccchHHHHHHHHHcCCCC--CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 353 DDIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 353 ~DID~~e~hd~fa~~~l~~~e~lGl~~--~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|||++|+||+|+++++.++|.||||+ .|+|++||++++|||+||||+++++|+
T Consensus 314 ~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~ 369 (400)
T PRK13359 314 DQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTA 369 (400)
T ss_pred HHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHH
Confidence 999999999999999999999999975 699999999999999999999999875
No 9
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.2e-71 Score=554.60 Aligned_cols=355 Identities=46% Similarity=0.703 Sum_probs=314.0
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+|.+.|+|+++++.+|+.+|++++|+++|+.+++||.+++|++.++..++.+.++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~ 80 (391)
T PRK07661 1 MREAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYT 80 (391)
T ss_pred CCcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 46899999999999996689999999999999999999999998889999999999887655457888999999999756
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCC--ChhhhhhhhhhccCcchHHHHHHHHHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSV--NPKVKAFEQAQNCLLPMGVTSENVAHR 206 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (406)
+|+++|+++|+||++|+..|++.|++|.+|++||+|+|+||+.|+. +..+ ...+.. ....+...|++++++|+++
T Consensus 81 ~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~-~~~~~~~~~~~~--~~~~~~~~m~~~a~~~~~~ 157 (391)
T PRK07661 81 VPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMM-GHVVRPNPRLVE--AAPEYYMGMGHTAEQVAVK 157 (391)
T ss_pred cceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCcc-ccccCCCccccc--cccchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987641 1111 111111 0111233589999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCC-CCCC--CCCeeeeccCCCCCCCchhhhhhcCCcccCC
Q 015474 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDP-KTGD--EKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (406)
Q Consensus 207 ~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~-~~~~--~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~ 283 (406)
||+|||++|+|+++||+||.+||++|+|+.||+|++++.++- ++++ ....+++.||++|+++|+|.|.+++|+|.+.
T Consensus 158 ~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~ 237 (391)
T PRK07661 158 YGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVK 237 (391)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCC
Confidence 999999999999999999999999999999999998863100 0111 1136799999999999999999999999888
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcccc
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~ 363 (406)
|++|++|||+++|||+|+||+|++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||+||+||+
T Consensus 238 g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 317 (391)
T PRK07661 238 GSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEA 317 (391)
T ss_pred CCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCH
Confidence 99999999999999999999999999999999999999999998888878888899999999999999999999999999
Q ss_pred chHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 364 fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+++++.++|+||||++|+|++||++++|||+||||++|++||
T Consensus 318 f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el 360 (391)
T PRK07661 318 FASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSL 360 (391)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999985
No 10
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.8e-71 Score=550.89 Aligned_cols=350 Identities=37% Similarity=0.503 Sum_probs=309.9
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|++++.++.+|+.++++++|+|+|++|++||.+++|++.+...|+.+++|.+++.+|+|.+
T Consensus 1 m~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~ 79 (387)
T PRK07850 1 MGNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYH 79 (387)
T ss_pred CCcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCC
Confidence 5789999999999999 578899999999999999999999999999999999999886655457789999999999877
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC--CCCCChhhhhhhhhhccCcchHHHHHHHHHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW--EGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (406)
+|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.. +..+......... .....|+.++++|+++
T Consensus 80 ~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~--~~~~~m~~~ae~~~~~ 157 (387)
T PRK07850 80 VGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWD--IDMPNQFEAAERIAKR 157 (387)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccc--cCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987421 1111100000000 1124577899999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeecc----CCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV----DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 207 ~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~----~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
||+|||+||+|+++||+||.+++++|+|++||+|++++.. ||..+ ..+++.||.+| ++|+|+|.+++|+| +
T Consensus 158 ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~---~~~~~~D~~~r-~~t~e~l~~l~p~~-~ 232 (387)
T PRK07850 158 RGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGE---TRLVTRDQGLR-DTTMEGLAGLKPVL-E 232 (387)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCC---ceEeecCCCcc-cCCHHHhccCCCCC-C
Confidence 9999999999999999999999999999999999987643 22221 13689999999 99999999999999 6
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
+|++|.+|||+++|||+|+||+|++.|++++.+|.++|++++..+.+|..+..++..+++++|+++||+++|||++|+||
T Consensus 233 ~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d 312 (387)
T PRK07850 233 GGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINE 312 (387)
T ss_pred CCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeecc
Confidence 78889999999999999999999999999998888999999988777877788899999999999999999999999999
Q ss_pred cchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 363 ~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+++++.++|.||++.+|||++||++++|||+||||+++++|+
T Consensus 313 ~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~ 356 (387)
T PRK07850 313 AFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTA 356 (387)
T ss_pred cchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999885
No 11
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=100.00 E-value=3.5e-71 Score=552.09 Aligned_cols=349 Identities=43% Similarity=0.620 Sum_probs=312.1
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~d-Agl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
+|||||++||||+|.+.|+++++++.+|+.++++++|++ +|++|++||.+++|++.+...++.++++.++...|+|..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 489999999999986689999999999999999999995 6999999999999998755544567999999899998889
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCC
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~ 209 (406)
|+++||++|+||+.||..|++.|++|++|++|++|+|+||..|...+..+...+.+. . .+....|++++++|+++||+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~~~ygi 158 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLH-V-AKAAGMMGLTAEMLGKMHGI 158 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhh-h-ccccchHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999987753221222222111 0 11124799999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC-CCCccc
Q 015474 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 288 (406)
Q Consensus 210 sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~-~g~lt~ 288 (406)
|||++|+||++||+||.++.++|+|++||+||+++..+ + +..++++|+.+|+++|+|+++++||+|+| +|.+|+
T Consensus 159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~---~--~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD---G--FLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC---C--CceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 99999999999999999999999999999999886321 1 23568999999999999999999999998 789999
Q ss_pred CCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHH
Q 015474 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (406)
Q Consensus 289 ~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~ 368 (406)
+|||+++|||+++||++++.+++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|++++
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~ 313 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQA 313 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHH
Confidence 99999999999999999999999999999999999998878877777889999999999999999999999999999999
Q ss_pred HHHHHHcCCCC---CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 369 VYCRNKLGLDP---EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 369 l~~~e~lGl~~---~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+.++|+||||+ .|||++||++++|||+||||+|++.+|
T Consensus 314 l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l 354 (385)
T TIGR02445 314 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTL 354 (385)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHH
Confidence 99999999987 699999999999999999999999875
No 12
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-72 Score=521.25 Aligned_cols=350 Identities=39% Similarity=0.588 Sum_probs=324.4
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
+++|+||++.|||+|- |+|+|..++..+|..-|++++|+++.++++|++-+++|++++... |++++|++++-+|||..
T Consensus 5 ~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp~s 82 (396)
T KOG1390|consen 5 SKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLPYS 82 (396)
T ss_pred CCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCCcc
Confidence 4799999999999995 899999999999999999999999999999999999999999887 99999999999999999
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC----CCCCCC-----hh-hhhhhhhhccCcchHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA----WEGSVN-----PK-VKAFEQAQNCLLPMGV 198 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~----~~~~~~-----~~-~~~~~~~~~~~~~~g~ 198 (406)
+++++||..|+||+.|+.+|++.|+.|..|+++++|+|+||..||. .+.+++ |. +.+-..+.+...+||.
T Consensus 83 v~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~ 162 (396)
T KOG1390|consen 83 VPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGI 162 (396)
T ss_pred eeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCCcch
Confidence 9999999999999999999999999999999999999999999952 122222 21 1122223345579999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
++|+.+++|+||||+||.||+.|++++..++++|.|.+||+||+++.+.. .+++++||.+++.+..+++.++||
T Consensus 163 ~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg------~~~v~~DEe~~k~~~~~~~~~l~~ 236 (396)
T KOG1390|consen 163 CAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRG------ETVVKKDEEPKKGSNIEKLSKLRP 236 (396)
T ss_pred hHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCC------cEEeccchhhhcccchhhhccccc
Confidence 99999999999999999999999999999999999999999999986542 468999999999999999999999
Q ss_pred cccCC-CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 279 ~~~~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
+|.++ |++|..|.|.++|||+|+||++.+.+.++|++|+++|++|+.++.+|.+|.++|..|++++|+++||..+|||+
T Consensus 237 vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~ 316 (396)
T KOG1390|consen 237 VFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDY 316 (396)
T ss_pred eeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhH
Confidence 99764 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
||+||+|+...+..++.|||+|.+||++||++++|||+|+||+|.+++|
T Consensus 317 ~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL 365 (396)
T KOG1390|consen 317 WEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTL 365 (396)
T ss_pred HhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHH
Confidence 9999999999999999999999999999999999999999999999876
No 13
>PRK09051 beta-ketothiolase; Provisional
Probab=100.00 E-value=7.3e-71 Score=551.39 Aligned_cols=351 Identities=43% Similarity=0.690 Sum_probs=312.1
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.+|++++|+++|+++++||.+++|++.+...+..+.++.++..+|++.+
T Consensus 2 m~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 2 MREVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999987654346788989999999756
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC-----CCCCCCh-hhhhh--h--hhhccCcchHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-----WEGSVNP-KVKAF--E--QAQNCLLPMGV 198 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~-----~~~~~~~-~~~~~--~--~~~~~~~~~g~ 198 (406)
+|+++|+++|+||++++..|++.|++|.+|++|++|+|+||+.|+. ++..+.+ ...+. . ........|++
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGV 160 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHH
Confidence 8999999999999999999999999999999999999999987641 1111111 00110 0 01111236999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
++++|+++||+|||++|+|+++||+||.+|+++|+|++||+|+.++.+ ++ .+++++|+++|+++|+|+|.++||
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~---~~---~~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR---KG---EVVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC---CC---CeEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987632 12 267899999999999999999999
Q ss_pred cccCC-CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 279 ~~~~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
+|+|+ |++|++|||+++|||+++||+|++.|++++.+|++||++++..+.+|..++.++..|++++|+++||+++|||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~ 314 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDV 314 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCE
Confidence 99876 89999999999999999999999999999999999999999998888878889999999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
||+||+|+++++.++|.|||+++|||++||++++|||+||||+++++|+
T Consensus 315 ~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~ 363 (394)
T PRK09051 315 IEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKA 363 (394)
T ss_pred EEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999874
No 14
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.3e-71 Score=553.27 Aligned_cols=351 Identities=38% Similarity=0.564 Sum_probs=311.3
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| ++|.+++.++.+|+.+|++++|+|+|+++++||.+++|++.+... +.++++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~ 78 (393)
T PRK08235 1 MSKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWE 78 (393)
T ss_pred CCcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCC
Confidence 5789999999999998 678999999999999999999999999999999999999876543 67888989999999767
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-----CCCCCh-hhhh----hh-hhhccCcchH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-KVKA----FE-QAQNCLLPMG 197 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-----~~~~~~-~~~~----~~-~~~~~~~~~g 197 (406)
.|+++|+++|+||+++|..|++.|++|.+|++|++|+|+||+.|+.. +..+.+ .+.+ .+ ........|+
T Consensus 79 ~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (393)
T PRK08235 79 VQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMG 158 (393)
T ss_pred cceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHH
Confidence 99999999999999999999999999999999999999999877421 111111 0111 00 0111123699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcC
Q 015474 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (406)
Q Consensus 198 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~ 277 (406)
.++++|+++||+|||++|+|+++||+||.+|.++|+|++||+|++++.+ +| +..++++|+++|+++|+|+++++|
T Consensus 159 ~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~---~~--~~~~~~~da~~r~~~t~e~~~~~~ 233 (393)
T PRK08235 159 VYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR---KG--DPIVVAKDEAPRKDTTIEKLAKLK 233 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC---CC--CceEeCCCCCCCCCCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999987532 12 235689999999999999999999
Q ss_pred CcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 278 p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
|+|+|+|++|++|||+++|||+|+||+|++.|++++.+|+++|++++..+.++..+..++..+++++|+++||+++|||+
T Consensus 234 ~v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ 313 (393)
T PRK08235 234 PVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDL 313 (393)
T ss_pred CcccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCe
Confidence 99999999999999999999999999999999999999999999988877667667778889999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+++++.++|.||||++|||++||++++|||+||||++|++||
T Consensus 314 ~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l 362 (393)
T PRK08235 314 FEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTL 362 (393)
T ss_pred ehhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999885
No 15
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=6.1e-71 Score=551.10 Aligned_cols=351 Identities=43% Similarity=0.631 Sum_probs=312.8
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~d-Agl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|++|||||++||||+|.+.|+++++.+.+|+.++++++|++ +||++++||.+++|++.+...++.++++.++..+|+|.
T Consensus 1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~ 80 (387)
T PRK08947 1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH 80 (387)
T ss_pred CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence 57899999999999996679999999999999999999995 79999999999999987554445778999999999986
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
++|+++|+++|+||+.|+..|+.+|++|++|++|++|+|+||..|...+..+...+.+. . .+....|++.+++|+++|
T Consensus 81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~~~y 158 (387)
T PRK08947 81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKN-V-AKAAGMMGLTAEMLGKMH 158 (387)
T ss_pred CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhh-c-cccchHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999987643221222122111 0 112247999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC-CCCc
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTT 286 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~-~g~l 286 (406)
|+|||++|+|+++||+||.+|+.+|+|++||+|+.++.++ ..+.++++|+.+|+++|+|+|+++||+|+| .|++
T Consensus 159 gisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~l 233 (387)
T PRK08947 159 GISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDAD-----GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTV 233 (387)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCC-----CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcE
Confidence 9999999999999999999999999999999999876421 223578999999999999999999999998 7889
Q ss_pred ccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchH
Q 015474 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (406)
Q Consensus 287 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~ 366 (406)
|++|||+++|||+|+||++++.+++++.+|+++|++++..+.++..++.++..+++++|+++||+++|||++|+||+|++
T Consensus 234 t~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~ 313 (387)
T PRK08947 234 TAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAA 313 (387)
T ss_pred EccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchH
Confidence 99999999999999999999999999999989999999987777777778899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCC---CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 367 QFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 367 ~~l~~~e~lGl~~---~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+++.++|+||||+ +|+|++||++++|||+||||++|+.+|
T Consensus 314 ~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l 356 (387)
T PRK08947 314 QSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTL 356 (387)
T ss_pred HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHH
Confidence 9999999999987 599999999999999999999999875
No 16
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.4e-70 Score=549.08 Aligned_cols=356 Identities=43% Similarity=0.678 Sum_probs=318.2
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+|.+.+++++.++.+|+.+|++++|+|+|+++++||.+++|++.++..++.+.++.++..+|++.+
T Consensus 1 M~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~ 80 (392)
T PRK07108 1 MTEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVT 80 (392)
T ss_pred CCcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCC
Confidence 57899999999999987678899999999999999999999999999999999999998776456799999999999767
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
+|+++|+++|+||+.||..|+++|++|++|++|++|+|+||+.|..... .....+... ...+....|+.++++++..|
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~-~~~~~~~~m~~~ae~~a~~~ 159 (392)
T PRK07108 81 VPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVE-HKPEIYWSMLQTAENVAKRY 159 (392)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhc-cCCccccCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999987753211 111111000 01122246899999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeec--cCCCCC--CCCCeeeeccCCCCCCCchhhhhhcCCcccCC
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI--VDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~--~~~~~~--~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~ 283 (406)
+++|+++|+|++.+|++|..+.+.|+|++||+||...+ +||..+ .+++.++++||++|+++|+|+|.+++|+| +.
T Consensus 160 ~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~ 238 (392)
T PRK07108 160 GISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PG 238 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CC
Confidence 99999999999999999999999999999999998753 455444 34457899999999999999999999999 67
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcccc
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~ 363 (406)
|++|++|||+++|||+|+||++++.|++++.+|+++|++++..+.+|+.++.++..|++++|+++||+++|||++|+||+
T Consensus 239 g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~ea 318 (392)
T PRK07108 239 GVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEA 318 (392)
T ss_pred CCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhH
Confidence 99999999999999999999999999999999999999999998888888889999999999999999999999999999
Q ss_pred chHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 364 fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|++++++++|+||||++|||++||++++|||+||||+|++++|
T Consensus 319 fa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 319 FAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999875
No 17
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.8e-70 Score=548.22 Aligned_cols=351 Identities=38% Similarity=0.593 Sum_probs=311.1
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... +++.++.++..+|++.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~ 78 (404)
T PRK06205 1 MRDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVT 78 (404)
T ss_pred CCceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCC
Confidence 5789999999999999 678999999999999999999999999999999999999887765 67788999999999756
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC-----CCCCCCCh-hhhhh------hh--h-hccC
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-----AWEGSVNP-KVKAF------EQ--A-QNCL 193 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~-----~~~~~~~~-~~~~~------~~--~-~~~~ 193 (406)
.|+++|+++|+||+.+|..|++.|++|.+|++||+|+|+||+.+. +++..+.+ .+++. +. . ....
T Consensus 79 ~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (404)
T PRK06205 79 VPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVP 158 (404)
T ss_pred CceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCC
Confidence 899999999999999999999999999999999999999997663 11111111 01110 00 1 1123
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh
Q 015474 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (406)
Q Consensus 194 ~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l 273 (406)
..|+.++++|+++||+|||+||+|+++||+||.++.+.|+|++||+||+++.+ +.++.++++|+++|+++|+|+|
T Consensus 159 ~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~-----~~~~~~~~~da~~r~~~t~e~~ 233 (404)
T PRK06205 159 GGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR-----KGDPTVVDRDEHPRADTTLESL 233 (404)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC-----CCCceEeccCCCCCCCCCHHHH
Confidence 46777899999999999999999999999999999999999999999987532 1223578999999999999999
Q ss_pred hhcCCcc---cCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCC
Q 015474 274 AKLKPVF---KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 350 (406)
Q Consensus 274 ~~~~p~~---~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl 350 (406)
+++||+| +|+|++|++|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..|++++|+++||
T Consensus 234 ~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl 313 (404)
T PRK06205 234 AKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGL 313 (404)
T ss_pred hcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCC
Confidence 9999999 5788999999999999999999999999999999999999999998888877778999999999999999
Q ss_pred CCCCccEEEccccchHHHHHHHHHcCCCC---CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 351 QLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 351 ~~~DID~~e~hd~fa~~~l~~~e~lGl~~---~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+++|||++|+||+|+++++.++|.||||+ +|||++||++++|||+||||+++++|+
T Consensus 314 ~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~ 372 (404)
T PRK06205 314 TLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATL 372 (404)
T ss_pred CHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHH
Confidence 99999999999999999999999999998 589999999999999999999999885
No 18
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.5e-70 Score=546.98 Aligned_cols=349 Identities=36% Similarity=0.587 Sum_probs=312.5
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|||||+.||||+| ++|.|++.++.+|+.++++++|+|+|+++++||.+++|++.+... +++.++.+++.+|+|.++
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 589999999999999 689999999999999999999999999999999999999987764 788999999999998679
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC----CCCCCh--hh----hhhhhhhccCcchHHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW----EGSVNP--KV----KAFEQAQNCLLPMGVT 199 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~----~~~~~~--~~----~~~~~~~~~~~~~g~~ 199 (406)
|+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|... ...+.. .. ++.+........|++.
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGIT 160 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHH
Confidence 9999999999999999999999999999999999999999765310 001111 00 0111111112368999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCc
Q 015474 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (406)
Q Consensus 200 a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~ 279 (406)
+++|+++||+|||++|+|+++||+||.+||++++|++||+|++++.+ ++ ..+++.||.+|+.+++|.|.+++|+
T Consensus 161 a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~---~~---~~~~~~d~~~rp~~~~e~l~~l~p~ 234 (392)
T PRK06633 161 AENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIK---KT---TSLFDHDETVRPDTSLEILSKLRPA 234 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccC---CC---ceeeccCCCCCCCCCHHHHccCCCc
Confidence 99999999999999999999999999999999999999999987531 11 2578999999999999999999999
Q ss_pred ccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 015474 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (406)
Q Consensus 280 ~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e 359 (406)
|+|.|++|++|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|
T Consensus 235 ~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 235 FDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred cCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 99999999999999999999999999999999999999999999998888888888889999999999999999999999
Q ss_pred ccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 360 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 360 ~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+||+|+++++++.|.||++..|||++||++++|||+||||++|++++
T Consensus 315 i~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~ 361 (392)
T PRK06633 315 VNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITL 361 (392)
T ss_pred hhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999874
No 19
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.7e-70 Score=545.29 Aligned_cols=352 Identities=39% Similarity=0.601 Sum_probs=309.8
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.++++++|+|+|+++++||.+++|++.+...++.++++.++..+|+|.+
T Consensus 1 ~~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~ 79 (401)
T PRK08131 1 MLDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVT 79 (401)
T ss_pred CCcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCC
Confidence 5789999999999998 468899999999999999999999999999999999999987665457889999999999878
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC---CCCC--Chhhhhh--------hhhh--ccC
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW---EGSV--NPKVKAF--------EQAQ--NCL 193 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~---~~~~--~~~~~~~--------~~~~--~~~ 193 (406)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|... +..+ ...+++. +... ...
T Consensus 80 ~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (401)
T PRK08131 80 VPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGN 159 (401)
T ss_pred CceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCccccccccc
Confidence 99999999999999999999999999999999999999999877411 0011 1011111 1001 123
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh
Q 015474 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (406)
Q Consensus 194 ~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l 273 (406)
..||+++++|+++||+|||++|+|+++||+++..+.+.++|+++|+|+++.... +.+..+++.||++|+.+|+|.|
T Consensus 160 ~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~----~~~~~~v~~De~~r~~~~~e~L 235 (401)
T PRK08131 160 DSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGR----KLPPKLVAEDEHPRPSSTVEAL 235 (401)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEecccc----CCCceEEecCCCCCCCCCHHHH
Confidence 468999999999999999999999999999999999998999999999874210 1112458999999999999999
Q ss_pred hhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCC
Q 015474 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (406)
Q Consensus 274 ~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 353 (406)
.++||+| +.|++|++|||+++|||+|+||+|++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++
T Consensus 236 ~~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~ 314 (401)
T PRK08131 236 TKLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLD 314 (401)
T ss_pred hcCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence 9999999 558999999999999999999999999999999999999999998888888888999999999999999999
Q ss_pred CccEEEccccchHHHHHHHHHcCCC--CCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 354 DIDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 354 DID~~e~hd~fa~~~l~~~e~lGl~--~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|||++|+||+|+++++.++|+|||| ..|||++||++++|||+||||++|++||
T Consensus 315 did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el 369 (401)
T PRK08131 315 DMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTA 369 (401)
T ss_pred HCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHH
Confidence 9999999999999999999999997 4599999999999999999999999985
No 20
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=100.00 E-value=4.4e-70 Score=546.12 Aligned_cols=352 Identities=40% Similarity=0.591 Sum_probs=312.4
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIE-KTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~-dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|++|||||++||||+| +.|.+++.++.+|+.++++++|+ ++|+++++||.+++|++.+.+.++.++++.+++.+|+|.
T Consensus 1 M~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~ 79 (401)
T PRK09050 1 MTEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPV 79 (401)
T ss_pred CCcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCC
Confidence 4689999999999998 56899999999999999999999 589999999999999998655434789999999999987
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC-C--CCCCC--hhhhh--------hhh--hhcc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-W--EGSVN--PKVKA--------FEQ--AQNC 192 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~-~--~~~~~--~~~~~--------~~~--~~~~ 192 (406)
++|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+. . ...+. ..+.+ .+. +...
T Consensus 80 ~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (401)
T PRK09050 80 SVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYG 159 (401)
T ss_pred CCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccc
Confidence 89999999999999999999999999999999999999999987741 0 00010 00000 011 1112
Q ss_pred CcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhh
Q 015474 193 LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 272 (406)
Q Consensus 193 ~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~ 272 (406)
..+||+++|+|+++||+|||+||+||..||+|+.++.+.|+|++||+|++++.+ +| +..++++|+++|+++|+|+
T Consensus 160 ~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~---~~--~~~~~~~da~~r~~~t~e~ 234 (401)
T PRK09050 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK---KG--DPVVVDRDEHPRPETTLEA 234 (401)
T ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC---CC--CceeeCCCCCCCCCCCHHH
Confidence 457999999999999999999999999999999999999999999999987632 12 2357899999999999999
Q ss_pred hhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCC
Q 015474 273 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQL 352 (406)
Q Consensus 273 l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~ 352 (406)
|.++||+|+|+|++|++|||+++|||+|+||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||++
T Consensus 235 l~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~ 314 (401)
T PRK09050 235 LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTI 314 (401)
T ss_pred HhcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCH
Confidence 99999999988999999999999999999999999999999999999999999888887788889999999999999999
Q ss_pred CCccEEEccccchHHHHHHHHHcCCCC--CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 353 DDIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 353 ~DID~~e~hd~fa~~~l~~~e~lGl~~--~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|||++|+||+|+++++.++|.||||+ .|||++||++++|||+||||+++++|+
T Consensus 315 ~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~ 370 (401)
T PRK09050 315 DQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTA 370 (401)
T ss_pred HHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHH
Confidence 999999999999999999999999986 699999999999999999999999875
No 21
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=100.00 E-value=4.4e-70 Score=545.48 Aligned_cols=351 Identities=39% Similarity=0.586 Sum_probs=311.0
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIE-KTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~-dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
++|||||++||||+| +.|.++++++.+|+.++++++|+ ++||++++||.+++|++.+...++.++++.+++.+|++.+
T Consensus 1 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 79 (400)
T TIGR02430 1 REAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVS 79 (400)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 369999999999998 56899999999999999999999 5799999999999999986554357899999999999767
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC---CCCC---Chhhh-------hhhh--hhccC
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW---EGSV---NPKVK-------AFEQ--AQNCL 193 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~---~~~~---~~~~~-------~~~~--~~~~~ 193 (406)
+|+++|+++|+||++||..|+++|++|++|++|++|+|+||+.|+.. +..+ ...++ ..+. +....
T Consensus 80 ~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T TIGR02430 80 VPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGV 159 (400)
T ss_pred CceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccccccc
Confidence 99999999999999999999999999999999999999999877410 0001 00000 0011 11123
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh
Q 015474 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (406)
Q Consensus 194 ~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l 273 (406)
..||.++++|+++||+|||+||+||++||++|..+.+.|+|++||+||.+|++.. +..++++|+++|+++|+|++
T Consensus 160 ~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~-----~~~~~n~da~~r~~~t~e~l 234 (400)
T TIGR02430 160 DSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKG-----EPTVVDQDEHPRPETTLEGL 234 (400)
T ss_pred CcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCC-----CceeeCCCCccCCCCCHHHH
Confidence 5799999999999999999999999999999999999999999999999875421 11368999999999999999
Q ss_pred hhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCC
Q 015474 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (406)
Q Consensus 274 ~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 353 (406)
.++||+|+|+|++|++|||+++|||+++||++++.|++++.+|.++|++++..+.+|..++.++..+++++|+++||+++
T Consensus 235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~ 314 (400)
T TIGR02430 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSID 314 (400)
T ss_pred hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHH
Confidence 99999999989999999999999999999999999999999888999999988777877778889999999999999999
Q ss_pred CccEEEccccchHHHHHHHHHcCCCC--CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 354 DIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 354 DID~~e~hd~fa~~~l~~~e~lGl~~--~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|||++|+||+|+++++.++|.||||+ .|||++||++++|||+||||+++++|+
T Consensus 315 DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~ 369 (400)
T TIGR02430 315 QFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTA 369 (400)
T ss_pred HCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHH
Confidence 99999999999999999999999986 699999999999999999999999885
No 22
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.7e-69 Score=542.81 Aligned_cols=351 Identities=41% Similarity=0.639 Sum_probs=309.1
Q ss_pred CCceEEEEeeecccccCC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHc
Q 015474 49 GDDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA 123 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~-----~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~l 123 (406)
|++|||||++||||+|.. .|+|++.++.+|+.+++++||+|+||+++|||.+++|++.+...+..+.++......
T Consensus 1 m~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a 80 (394)
T PRK06445 1 LEDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA 80 (394)
T ss_pred CCcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc
Confidence 468999999999999853 589999999999999999999999999999999999998875432356677777777
Q ss_pred CCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC------CCC-hhhhhhhhhhccCcch
Q 015474 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVN-PKVKAFEQAQNCLLPM 196 (406)
Q Consensus 124 Gl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~------~~~-~~~~~~~~~~~~~~~~ 196 (406)
+++.+.|+++|+++|+||+.++..|++.|++|.+|++|++|+|+||+.|..... .+. +..+.. ........|
T Consensus 81 ~~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 159 (394)
T PRK06445 81 RLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIE-YDLTTGYVM 159 (394)
T ss_pred CCCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCc-ccccCCCCH
Confidence 787678999999999999999999999999999999999999999976632100 000 100000 011122359
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhc
Q 015474 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (406)
Q Consensus 197 g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~ 276 (406)
++.+++|+++||+|||++|+|++++|+||.+|+..|+|++||+|+++. + ++. +.++++|+.+|+++|+|+++++
T Consensus 160 a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~---~~~--~~~~npda~~r~~~t~e~~~~~ 233 (394)
T PRK06445 160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-V---EGK--KKVVDVDQSVRPDTSLEKLAKL 233 (394)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-C---CCC--ceeeCCCCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999999872 1 222 2568999999999999999999
Q ss_pred CCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 015474 277 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (406)
Q Consensus 277 ~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID 356 (406)
+|+|+|.|++|.+|||+++|||+++||+|++.|++++.+|+++|++++....+|..++.++..+++++|+++||+++|||
T Consensus 234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId 313 (394)
T PRK06445 234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDID 313 (394)
T ss_pred CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcC
Confidence 99999989999999999999999999999999999999999999999998888877888899999999999999999999
Q ss_pred EEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|+||+|+++++.++|+||||++|||++||++++|||+||||++|++|+
T Consensus 314 ~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~ 363 (394)
T PRK06445 314 LWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTL 363 (394)
T ss_pred EEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999885
No 23
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.6e-69 Score=540.01 Aligned_cols=351 Identities=41% Similarity=0.646 Sum_probs=311.5
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... ++++++.++..+|++.+
T Consensus 1 m~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~ 78 (393)
T PRK05656 1 MQDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHS 78 (393)
T ss_pred CCcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCC
Confidence 4789999999999998 578899999999999999999999999999999999999876544 56789999999999755
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-----CCCCCh-h-hhh---hhh-hhccCcchH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-K-VKA---FEQ-AQNCLLPMG 197 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-----~~~~~~-~-~~~---~~~-~~~~~~~~g 197 (406)
.|+++|+++|+||+.+|..|++.|++|.+|++|++|+|+||..|+.. +..+.. . +.. .+. .......|+
T Consensus 79 ~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (393)
T PRK05656 79 VPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMG 158 (393)
T ss_pred cceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHH
Confidence 89999999999999999999999999999999999999999877421 001100 0 100 000 001124699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcC
Q 015474 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (406)
Q Consensus 198 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~ 277 (406)
+.+++|+++||+|||++|+|+++||+||.+|+..|+|++||+|+++.... .++++++.||++|+++|+|+|.++|
T Consensus 159 ~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~-----~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 159 ITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRK-----GEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCC-----CCceEeccCCCCCCCCCHHHHhcCC
Confidence 99999999999999999999999999999997777999999999874221 2345689999999999999999999
Q ss_pred CcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 278 p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
|+|.++|++|++|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||+
T Consensus 234 p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 313 (393)
T PRK05656 234 PAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDL 313 (393)
T ss_pred CCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99998999999999999999999999999999999999999999999988888888889999999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+.+++.++|.||+|++|+|++||++++|||+||||++|++||
T Consensus 314 ~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l 362 (393)
T PRK05656 314 IEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTL 362 (393)
T ss_pred EEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999885
No 24
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=100.00 E-value=7.6e-69 Score=541.23 Aligned_cols=347 Identities=33% Similarity=0.514 Sum_probs=306.1
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|||||++||||+| ++|.+++.++.+|+.++++++|+|+||++++||.+++|++.+... +.++++.+++.+|+|..+
T Consensus 7 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~~ 84 (430)
T TIGR02446 7 ERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVHT 84 (430)
T ss_pred CCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCCC
Confidence 689999999999998 579999999999999999999999999999999999999887554 578999999999998789
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC-------------CCChh--------hhh-hh
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-------------SVNPK--------VKA-FE 187 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~-------------~~~~~--------~~~-~~ 187 (406)
|+++|+++|+||+.|+..|+.+|++|.+|++|++|+|+||+.|+.... ..... +.. .+
T Consensus 85 p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (430)
T TIGR02446 85 DAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMP 164 (430)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcc
Confidence 999999999999999999999999999999999999999987642110 00000 000 00
Q ss_pred hh-----hccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccC
Q 015474 188 QA-----QNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (406)
Q Consensus 188 ~~-----~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de 262 (406)
.. ..+...|++.+++|+++||+|||+||+|+++||+||.++++.|.|++||+|+..+ |+ ..+++.||
T Consensus 165 ~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~n---p~-----a~~~~~D~ 236 (430)
T TIGR02446 165 VPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPP---PY-----KQWIAEDN 236 (430)
T ss_pred cCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeec---CC-----ceEecccC
Confidence 00 0013369999999999999999999999999999999999999999999998642 22 24689999
Q ss_pred CCCCCCchhhhhhcCCcccC-CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCC-CCCCCCHHHH
Q 015474 263 GIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP-AIMGVGPAVA 340 (406)
Q Consensus 263 ~~r~~~t~e~l~~~~p~~~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-~~~~~~~~~A 340 (406)
++|+++|+|+|.++||+|+| .|++|++|||+++|||+|+||+|++.|++++.+|.++|.+++..+.+| ..+..++..+
T Consensus 237 ~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a 316 (430)
T TIGR02446 237 NIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYA 316 (430)
T ss_pred CCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHH
Confidence 99999999999999999998 589999999999999999999999999999999989999998877766 3567788899
Q ss_pred HHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchhHHHHH
Q 015474 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 341 ~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lG-----------------l~~~~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
++++|+++||+++|||++|+||+|+++++.++|+|| ++.+|||++||++++|||+||||++|+
T Consensus 317 ~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v 396 (430)
T TIGR02446 317 TPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMI 396 (430)
T ss_pred HHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHH
Confidence 999999999999999999999999999999999997 566699999999999999999999999
Q ss_pred hhC
Q 015474 404 NCL 406 (406)
Q Consensus 404 ~~l 406 (406)
+|+
T Consensus 397 ~e~ 399 (430)
T TIGR02446 397 TQT 399 (430)
T ss_pred HHH
Confidence 885
No 25
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=2.5e-68 Score=538.86 Aligned_cols=347 Identities=35% Similarity=0.532 Sum_probs=304.6
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|||||++||||+| ++|.+++.++.+|+.++++++|+|+||+|++||.+++|++.+... +.++++.+++.+|++.++
T Consensus 5 ~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~~ 82 (428)
T PRK08963 5 DRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVHT 82 (428)
T ss_pred CeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCCC
Confidence 689999999999998 568999999999999999999999999999999999999876554 678899999999997679
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC-------------CChh--------hhh-h-
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK--------VKA-F- 186 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~-------------~~~~--------~~~-~- 186 (406)
|+++|+++|+||++|+..|++.|++|.+|++|++|+|+||+.|+.+... +... ... .
T Consensus 83 P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (428)
T PRK08963 83 DAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLP 162 (428)
T ss_pred cceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccc
Confidence 9999999999999999999999999999999999999999877421100 0000 000 0
Q ss_pred --hh--hhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccC
Q 015474 187 --EQ--AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (406)
Q Consensus 187 --~~--~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de 262 (406)
+. ...+...|++.+++|+++||+|||++|+|+++||+||.+|.+.|+|++||+|+.++ |. ..+++.||
T Consensus 163 ~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~---p~-----a~~~~~D~ 234 (428)
T PRK08963 163 VPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVP---PY-----KQPLEEDN 234 (428)
T ss_pred cCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEec---CC-----ceeeCCCC
Confidence 00 00112469999999999999999999999999999999999999999999999863 21 12589999
Q ss_pred CCCCCCchhhhhhcCCcccC-CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC-CCCCCHHHH
Q 015474 263 GIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGPAVA 340 (406)
Q Consensus 263 ~~r~~~t~e~l~~~~p~~~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-~~~~~~~~A 340 (406)
.+|+++|+|+|+++||+|+| +|++|++|||+++|||+|+||+|++.|++++.+|++||.+++..+.+|. .+..++..+
T Consensus 235 ~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a 314 (428)
T PRK08963 235 NIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYA 314 (428)
T ss_pred CCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHH
Confidence 99999999999999999985 6899999999999999999999999999999999999999998776663 355677889
Q ss_pred HHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchhHHHHH
Q 015474 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 341 ~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lG-----------------l~~~~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
++++|+++||+++|||++|+||+|+++++.++|.|| ++.+|||++||++++|||+||||++++
T Consensus 315 ~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~ 394 (428)
T PRK08963 315 TPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMI 394 (428)
T ss_pred HHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHH
Confidence 999999999999999999999999999999999994 566699999999999999999999999
Q ss_pred hhC
Q 015474 404 NCL 406 (406)
Q Consensus 404 ~~l 406 (406)
+|+
T Consensus 395 ~e~ 397 (428)
T PRK08963 395 TQT 397 (428)
T ss_pred HHH
Confidence 875
No 26
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-69 Score=485.85 Aligned_cols=349 Identities=39% Similarity=0.605 Sum_probs=331.2
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
+-|+||++.||+|+- |.|.+++++..+|..-|++.||+.+++.++.+|.+++|+++.+..++.+.+|.+-+..|+|.++
T Consensus 4 kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred ceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 569999999999996 8899999999999999999999999999999999999999999888889999999999999999
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC-----CCCC------CCChhhhhhhhhhccCcchHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-----AWEG------SVNPKVKAFEQAQNCLLPMGV 198 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~g~ 198 (406)
|+.+||+.|.||.++|..+++.|.-|+++++|++|+|+||..|+ ++|. .+.+.+|....+.++..+|++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 99999999999999999999999999999999999999999987 4554 334567777677788999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
++|++..+|.+|||+.|+|++.|++++.+++++|+|++||+||++|.+. .+.++.-||.+|+.+|+|.|.+++|
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kk------ge~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKK------GEQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeecc------CceeeEecCCCCccchHHHHhhCCc
Confidence 9999999999999999999999999999999999999999999998653 3467889999999999999999999
Q ss_pred cccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 015474 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (406)
Q Consensus 279 ~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~ 358 (406)
+|.++|.+|++|.|.++|||+|+|+++++..++++++|+++++++...+++|..||++|..|++.+|+++|++.+|||+|
T Consensus 237 vFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~ 316 (396)
T KOG1391|consen 237 VFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV 316 (396)
T ss_pred hhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhh
Q 015474 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 359 e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
|+||+|+.|.+.+.+.|+|+-.++|++||+|++|||+|+||.|...+
T Consensus 317 EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~H 363 (396)
T KOG1391|consen 317 EVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAH 363 (396)
T ss_pred EechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHH
Confidence 99999999999999999999999999999999999999999987654
No 27
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6.8e-68 Score=531.15 Aligned_cols=349 Identities=34% Similarity=0.481 Sum_probs=306.0
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
.++|+|||++||||+| +.|.+++.++.+|+.+|++++|+|+|+++++||.+++|++.+.+. +.+..+..++.+|+|.+
T Consensus 6 ~~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~ 83 (397)
T PRK06954 6 QDPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLS 83 (397)
T ss_pred CCCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCC
Confidence 3789999999999998 568999999999999999999999999999999999999886654 66778888888999867
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCC-----CCCC-----hhhhhhh--hhhccCcch
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN-----PKVKAFE--QAQNCLLPM 196 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~-----~~~~-----~~~~~~~--~~~~~~~~~ 196 (406)
.|+++|+++|+||++|+..|+.+|++|.+|++|++|+|+||+.|+... ..+. +.+...+ ........|
T Consensus 84 ~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T PRK06954 84 VGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLM 163 (397)
T ss_pred ccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCH
Confidence 999999999999999999999999999999999999999997664110 0111 0010011 111123579
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhc
Q 015474 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (406)
Q Consensus 197 g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~ 276 (406)
++++++|+++||+|||++|+||++||+||.++...|.|++++.|+++.... ...+++.||++| .++.|++.++
T Consensus 164 ~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~------~~~~v~~D~~pr-~~~~~~l~~l 236 (397)
T PRK06954 164 GTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKK------GDTVIDRDEQPF-KANPEKIPTL 236 (397)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCC------CCeEeccCCCcC-CCCHHHHhCC
Confidence 999999999999999999999999999999855555999999999874221 124699999999 5999999999
Q ss_pred CCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 015474 277 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (406)
Q Consensus 277 ~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID 356 (406)
+|+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|++++.....|..+..++..+++++|+++||+++|||
T Consensus 237 ~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did 316 (397)
T PRK06954 237 KPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVD 316 (397)
T ss_pred CCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999999999999999999999998887777777778899999999999999999999
Q ss_pred EEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+||+||+|+++++.++|+||||++|||++||++++|||+||||++|++|+
T Consensus 317 ~~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~ 366 (397)
T PRK06954 317 LFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTL 366 (397)
T ss_pred EEehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999875
No 28
>PRK05790 putative acyltransferase; Provisional
Probab=100.00 E-value=4.1e-67 Score=526.35 Aligned_cols=351 Identities=46% Similarity=0.687 Sum_probs=309.2
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|+|||+++|||+| ..|.+++.++.+|+.+|+++||+|+||+++|||.+++|++.+... +.++++.++..+|++.+
T Consensus 1 M~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~ 78 (393)
T PRK05790 1 MKDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVE 78 (393)
T ss_pred CCceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCC
Confidence 4789999999999998 467888999999999999999999999999999999998876543 56777878888999656
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-----CCCCCh-hhhh-----hhhhhccCcchH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-KVKA-----FEQAQNCLLPMG 197 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-----~~~~~~-~~~~-----~~~~~~~~~~~g 197 (406)
.|.++++++|+||+.+|..|+++|++|.+|++|++|+|+||+.|..+ +..+.. .... .+........|+
T Consensus 79 ~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (393)
T PRK05790 79 VPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMG 158 (393)
T ss_pred CceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHH
Confidence 79999999999999999999999999999999999999998866411 111110 0100 011111124699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcC
Q 015474 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (406)
Q Consensus 198 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~ 277 (406)
+.+++||++||+|||++++|++++|+||.+||++|+|+++|+|+....+ ..++.+++.|+.+|.++|.|+|.+++
T Consensus 159 ~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~-----~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 159 ITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR-----KGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC-----CCCceEecCCCCCCCCCCHHHHhCCC
Confidence 9999999999999999999999999999999999999999999987532 12345689999999999999999999
Q ss_pred CcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 278 p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
|+|+|.|++|.+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++|++++|||+
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~ 313 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDL 313 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99999899999999999999999999999999999999999999999988777767778889999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+++++.++|.||||+.|||++||++++|||+||||++|++|+
T Consensus 314 ~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~ 362 (393)
T PRK05790 314 IEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTL 362 (393)
T ss_pred EEeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985
No 29
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.1e-67 Score=530.04 Aligned_cols=346 Identities=38% Similarity=0.605 Sum_probs=299.2
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|||||++||||+| +.|.+++.++.+|+.+|+++||+|+||++++||.+++|+..+... ..++++.++..+|++.+
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 4689999999999998 467788899999999999999999999999999999998875443 45788999999999656
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC-----------------CCCh--hh---hhh
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----------------SVNP--KV---KAF 186 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~-----------------~~~~--~~---~~~ 186 (406)
.|.++++++|+||+++|..|+++|++|.+|++|++|+|+||+.|+.... ++.. .+ +..
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLA 159 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccc
Confidence 8999999999999999999999999999999999999999986531000 0000 00 111
Q ss_pred h-----hh-hcc--CcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeee
Q 015474 187 E-----QA-QNC--LLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (406)
Q Consensus 187 ~-----~~-~~~--~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~ 258 (406)
| .+ .+. ...|++.+++|+++||+|||++|+|+++||+||..+.+.|+|+ ||+||+.+ ++ ..+
T Consensus 160 ~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~-----~~----np~ 229 (426)
T PRK08170 160 PVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDR-----DG----KFY 229 (426)
T ss_pred cccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecC-----CC----Cee
Confidence 1 01 111 2479999999999999999999999999999999888889998 99999721 11 147
Q ss_pred eccCCCCCCCchhhhhhcCCccc-CCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCH
Q 015474 259 SVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 337 (406)
Q Consensus 259 ~~de~~r~~~t~e~l~~~~p~~~-~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~ 337 (406)
..||++|+++|+|+|+++||+|+ |.|++|++|||+++|||+|+||+|++.|++++.+|.+++++++..+.+|..++.++
T Consensus 230 a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~ 309 (426)
T PRK08170 230 DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGP 309 (426)
T ss_pred ccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccH
Confidence 88999999999999999999998 67899999999999999999999999999999999899999999888888888889
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHH---HcCCCC--------------CCCCCCCCccccCCccchhHH
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN---KLGLDP--------------EKINVNGGALAIGHPLGTTGN 400 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e---~lGl~~--------------~~vN~~GG~~a~Ghp~GatG~ 400 (406)
+.+++++|+++||+++|||++|+||+|+++++.+++ +||||+ .|||++||+|++|||+||||+
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~ 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccH
Confidence 999999999999999999999999999999996665 677765 499999999999999999999
Q ss_pred HHHhhC
Q 015474 401 CCSNCL 406 (406)
Q Consensus 401 ~~v~~l 406 (406)
+|+++|
T Consensus 390 ~~~~~l 395 (426)
T PRK08170 390 RIVLHL 395 (426)
T ss_pred HHHHHH
Confidence 999875
No 30
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-66 Score=525.50 Aligned_cols=343 Identities=32% Similarity=0.512 Sum_probs=297.1
Q ss_pred CCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 48 ~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
+|++|||||++||||+| +.|.+++.++.+|+.++++++|+|+|+++++||.+++|++.+... +.++++.++...|++.
T Consensus 5 ~m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~ 82 (427)
T PRK09268 5 TVRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSP 82 (427)
T ss_pred CCCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCC
Confidence 57899999999999998 568899999999999999999999999999999999999886543 4778999999988876
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC-------------CChh------h-h---
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK------V-K--- 184 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~-------------~~~~------~-~--- 184 (406)
..|+++|+++|+||+.++..|++.|++|.+|++|++|+|+||+.|+..... +... + .
T Consensus 83 ~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (427)
T PRK09268 83 YTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHL 162 (427)
T ss_pred CCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccc
Confidence 799999999999999999999999999999999999999999876421100 0000 0 0
Q ss_pred --hhhhhh--ccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeec
Q 015474 185 --AFEQAQ--NCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 260 (406)
Q Consensus 185 --~~~~~~--~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~ 260 (406)
..+... .....|+.++++||++||+|||++|+||++||+||.++.+.|+|++||.|+. .++.
T Consensus 163 ~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~--------------~~~~ 228 (427)
T PRK09268 163 APEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------------GLTR 228 (427)
T ss_pred cccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc--------------Cccc
Confidence 001111 1234699999999999999999999999999999999999999999998862 1778
Q ss_pred cCCCCCCCchhhhhhcCCcccC--CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCC----CCCC
Q 015474 261 DDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP----AIMG 334 (406)
Q Consensus 261 de~~r~~~t~e~l~~~~p~~~~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p----~~~~ 334 (406)
|+.+|+++|+|+|+++||+|+| +|++|++|||+++|||+|+||+|++.|++++.+|+.++..+...+.+| ..+.
T Consensus 229 D~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~ 308 (427)
T PRK09268 229 DNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLL 308 (427)
T ss_pred CCCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhh
Confidence 9999999999999999999998 789999999999999999999999999999999977775554444444 3466
Q ss_pred CCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHH---HHcCCCC--------------CCCCCCCCccccCCccch
Q 015474 335 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR---NKLGLDP--------------EKINVNGGALAIGHPLGT 397 (406)
Q Consensus 335 ~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~---e~lGl~~--------------~~vN~~GG~~a~Ghp~Ga 397 (406)
.++..|++++|+++||+++|||++|+||+|+++.+.++ |+||||+ .|||++||++++|||+||
T Consensus 309 ~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gA 388 (427)
T PRK09268 309 MAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAA 388 (427)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCccc
Confidence 78889999999999999999999999999999966666 9999883 489999999999999999
Q ss_pred hHHHHHhhC
Q 015474 398 TGNCCSNCL 406 (406)
Q Consensus 398 tG~~~v~~l 406 (406)
||+++++|+
T Consensus 389 TG~~~v~e~ 397 (427)
T PRK09268 389 TGGRIVATL 397 (427)
T ss_pred chHHHHHHH
Confidence 999999885
No 31
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.8e-65 Score=510.89 Aligned_cols=340 Identities=39% Similarity=0.579 Sum_probs=292.9
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|+|||+++|||+| +.+.+++.++.+|+.+|++++|+|+|+++++||.+++|++.....+..+.++.+....|++..
T Consensus 1 M~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~ 79 (382)
T PRK07801 1 MAEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEE 79 (382)
T ss_pred CCceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCC
Confidence 5789999999999998 457788899999999999999999999999999999998643322235577877788899767
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC--C--CCCC------CC-hhhhhhhhhhccCcchH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM--A--WEGS------VN-PKVKAFEQAQNCLLPMG 197 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~--~--~~~~------~~-~~~~~~~~~~~~~~~~g 197 (406)
.|.++++++|+||+.+|..|++.|++|++|++|++|+|+||..|+ . .+.. +. ...++.+... ...+++
T Consensus 80 ~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~ 158 (382)
T PRK07801 80 VPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGD-QEVSQF 158 (382)
T ss_pred CceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccC-CCCCHH
Confidence 899999999999999999999999999999999999999987653 1 1100 10 0001112211 123455
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcC
Q 015474 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (406)
Q Consensus 198 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~ 277 (406)
..+++|+++||+|||++++|++++|+||.+||++|+|.++++|+.. +..||++| ++|+|+|+++|
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~ 223 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLK 223 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCC
Confidence 5799999999999999999999999999999999999888888752 67799999 79999999999
Q ss_pred CcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 278 p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
|+++ .+++|++|||+++|||+|+||++++.|++++.+|.++|++++....+|..+..++..+++++|+++||+++|||+
T Consensus 224 ~i~~-~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~ 302 (382)
T PRK07801 224 PLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDV 302 (382)
T ss_pred CCCC-CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCE
Confidence 9994 368999999999999999999999999999998888999987766555556677889999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+++++.++|+||||++|||++||++++|||+||||++|++||
T Consensus 303 ~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~ 351 (382)
T PRK07801 303 VEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTL 351 (382)
T ss_pred eeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985
No 32
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.3e-64 Score=498.79 Aligned_cols=327 Identities=37% Similarity=0.578 Sum_probs=295.2
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
+|||||++||||+| +.|.+++.++.+|+..+++++++ |++ ++||.+++|++.+. +.+.+|.++..+|+|.++|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence 59999999999998 67999999999999999999854 896 89999999998654 3677888999999977899
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCC
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s 210 (406)
+++|+++|+||+.+|..|++.|++|++|++|++|+|+||+.|+.....+.+.+ .....|++++++|+++||+|
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~-------~~~~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPET-------IGDPDMGVAAEYVAERYNIT 147 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCccc-------ccCccHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999987742111111100 01124999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh-hhcCCcccCCCCcccC
Q 015474 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAG 289 (406)
Q Consensus 211 re~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l-~~~~p~~~~~g~lt~~ 289 (406)
||+||.||..||+|+.++.+.++|++||+|++. ++ |+.+|+.+|+|++ .+++|+|+|+|++|++
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~ 212 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence 999999999999999999999999999999751 55 8999999999999 7779999999999999
Q ss_pred CCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHH
Q 015474 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (406)
Q Consensus 290 ~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l 369 (406)
|||+++|||+|+||+|++.|++++.+|+++|++++..+.+|..+..++..+++++|+++||+++|||+||+||+|+++++
T Consensus 213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~ 292 (361)
T PRK06690 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVV 292 (361)
T ss_pred ccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHH
Confidence 99999999999999999999999999988999998888778777788899999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 370 ~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+++|.||||++|+|++||++++|||+|+||++++.+|
T Consensus 293 ~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~ 329 (361)
T PRK06690 293 ACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRL 329 (361)
T ss_pred HHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHH
Confidence 9999999999999999999999999999999999875
No 33
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.8e-64 Score=505.14 Aligned_cols=348 Identities=39% Similarity=0.604 Sum_probs=305.7
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dA-gl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|.+|||||+++|||+|.++|.|++.++.+|+.+|+++||+|+ ||+++|||.+++|++.+...++.+.++.++..+|++
T Consensus 1 m~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~- 79 (406)
T PRK07851 1 MPEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD- 79 (406)
T ss_pred CCcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-
Confidence 468999999999999876789999999999999999999997 999999999999987655443567789999999994
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC--------CCC-------------hhhhhh
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG--------SVN-------------PKVKAF 186 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~--------~~~-------------~~~~~~ 186 (406)
++|.++|+++|+||+.++..|++.|++|.+|+|||+|+|+||..+..... .+. +..++.
T Consensus 80 ~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
T PRK07851 80 FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHD 159 (406)
T ss_pred CCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccc
Confidence 68999999999999999999999999999999999999999876521000 000 001111
Q ss_pred hh----hhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccC
Q 015474 187 EQ----AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (406)
Q Consensus 187 ~~----~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de 262 (406)
+. .....+.||..+++|+++||++|+++++|++++|++|..+.+.+.+..+++|+..+. + +++++|+
T Consensus 160 ~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~-----~----~~~~~d~ 230 (406)
T PRK07851 160 PREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPD-----G----TVVSTDD 230 (406)
T ss_pred cccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCC-----C----ceeCCCC
Confidence 21 112245679999999999999999999999999999999999988899999987531 1 3578899
Q ss_pred CCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHH
Q 015474 263 GIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 342 (406)
Q Consensus 263 ~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~ 342 (406)
.+|+++|+|+++++||+++|.|.+|++|||+++|||+|+||++++.|++++.+|+++|+|++.....|..+..++..+++
T Consensus 231 ~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~ 310 (406)
T PRK07851 231 GPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASK 310 (406)
T ss_pred CccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999887777666677889999
Q ss_pred HHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 343 ~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|++|||+++|||++|+||+|+++++.++|+||||++|+|++||++++|||+|+||++|++|+
T Consensus 311 ~al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~ 374 (406)
T PRK07851 311 QALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTL 374 (406)
T ss_pred HHHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 34
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=100.00 E-value=1.1e-63 Score=500.47 Aligned_cols=350 Identities=35% Similarity=0.548 Sum_probs=302.4
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|||||+++|||+| +.+.+++.++.+|+.++++++|+|+||++++||.+++|++..... +.+.++.++..+|++.+.
T Consensus 1 ~~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 78 (394)
T PLN02644 1 RDVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPST 78 (394)
T ss_pred CcEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCC
Confidence 369999999999998 467888999999999999999999999999999999998765443 556778899999997678
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-----CCCCC-----hhhhhhhh-hhccCcchHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN-----PKVKAFEQ-AQNCLLPMGV 198 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-----~~~~~-----~~~~~~~~-~~~~~~~~g~ 198 (406)
|+++|+++|+||+.+|..|+++|++|++|++|++|+|+||+.|... +..+. +.+...+. .......|++
T Consensus 79 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (394)
T PLN02644 79 ICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGV 158 (394)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHH
Confidence 9999999999999999999999999999999999999999765311 10110 00100110 1111335889
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
.+++|+++||+|||++++|++++|+|+..|++.++|++||+|+++..+. +.+..+++.||.+| ..+.+.|.+++|
T Consensus 159 ~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~----~~~~~~~~~de~~~-~~~~~~l~~l~p 233 (394)
T PLN02644 159 CAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGR----GRPSVIVDKDEGLG-KFDPAKLRKLRP 233 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCC----CCCceEeecCCCcC-CCCHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999864211 11224578899997 789999999999
Q ss_pred cccC-CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 279 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 279 ~~~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
+|++ +|.+|.+|||+++|||+++||++++.|++++.+|+++|+|++.....+..+..++..+++++|+++||+++|||+
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~ 313 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDY 313 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 9988 699999999999999999999999999999999989999999876666556668888999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+++++.++|.||||++|+|++||++++|||+||||++|++||
T Consensus 314 ~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~ 362 (394)
T PLN02644 314 YEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTL 362 (394)
T ss_pred EEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999985
No 35
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=3.7e-63 Score=496.60 Aligned_cols=346 Identities=51% Similarity=0.778 Sum_probs=304.4
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~ 132 (406)
||||+++|||+| +.+.+++.++.+|+.+|+++||+|+|++++|||.+++++..++.. ++..++.++..+|++.+.|++
T Consensus 1 ~Ivg~~~Tpf~r-~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGR-FGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 599999999998 457788899999999999999999999999999999998776655 567788899999995447899
Q ss_pred EEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC----CC-Ch--hhhhhhhhh---ccCcchHHHHHH
Q 015474 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG----SV-NP--KVKAFEQAQ---NCLLPMGVTSEN 202 (406)
Q Consensus 133 ~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~----~~-~~--~~~~~~~~~---~~~~~~g~~a~~ 202 (406)
+|+.+|+|++.+|..|+++|++|.+|+||++|+|+||..+..... .+ .. ..+..+... .....|++.+++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 158 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN 158 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence 999999999999999999999999999999999999876532111 11 00 001111111 123468999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
||++||+|||++++|++++|+||..||+.+.+.++|.|+..+.+ ++..++++|+.+|+++|+|+|+++||+++|
T Consensus 159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p 232 (386)
T cd00751 159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232 (386)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999986421 234678899999999999999999999999
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
.|++|++|||+++|||+++||++++.|++++.+|+++|++++....++..+..++..+++++|+++||+++|||++|+||
T Consensus 233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d 312 (386)
T cd00751 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE 312 (386)
T ss_pred CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence 99999999999999999999999999999999999999999998777776777888999999999999999999999999
Q ss_pred cchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 363 ~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|++.+++++|.||+|+.|+|++||++++|||+||||+++++|+
T Consensus 313 ~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~ 356 (386)
T cd00751 313 AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTL 356 (386)
T ss_pred hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999874
No 36
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=100.00 E-value=1.5e-62 Score=491.60 Aligned_cols=345 Identities=50% Similarity=0.764 Sum_probs=301.6
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE
Q 015474 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (406)
Q Consensus 54 Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~ 133 (406)
|||+++|||+| ..|.+++.+..+|+.+|+++||+|+|++++|||.+++++..+... .+.+++.++..+|++.+.|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 78999999998 457788999999999999999999999999999999998776554 4567888999999964589999
Q ss_pred EcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC------CCCCChh-h--hhhhhhh-c--cCcchHHHHH
Q 015474 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW------EGSVNPK-V--KAFEQAQ-N--CLLPMGVTSE 201 (406)
Q Consensus 134 v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~------~~~~~~~-~--~~~~~~~-~--~~~~~g~~a~ 201 (406)
++++|+|++.+|..|++.|++|.+|++|++|+|+|++.+... ...+... . +..+... . ....|++.++
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 999999999999999999999999999999999998765321 1011100 0 1111111 1 1346899999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCccc
Q 015474 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (406)
Q Consensus 202 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~ 281 (406)
+||++||+|||++++|++++|+||.+|+++|.|+++|+|...+.+ +..++++.|+.+|+++|+|++++++|+++
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~------~~~~~~~~da~~r~~~t~e~v~~s~~i~~ 232 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGR------KGPVTVSTDEGIRPNTTLEKLAKLKPAFD 232 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999865321 12367899999999999999999999999
Q ss_pred CCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 282 ~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
|.|.+|++|||+++|||+|+||++++.|++++.+|+++|.|++..+..|..+..++..+++++|+++||+++|||++|+|
T Consensus 233 P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 233 PNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred CCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehc
Confidence 88889999999999999999999999999999999999999999877776667778899999999999999999999999
Q ss_pred ccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 362 d~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+|++.+++++|.||+...|||++||++++|||+||||+++++|+
T Consensus 313 d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~ 357 (386)
T TIGR01930 313 EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTL 357 (386)
T ss_pred chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHH
Confidence 999999999999999988899999999999999999999999873
No 37
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=1e-58 Score=465.22 Aligned_cols=315 Identities=19% Similarity=0.278 Sum_probs=261.5
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|+|||+++|||+|. .+.++.+|+.++++++|+|+||+++|||.+++|+...... ....+..++..+|++ +.
T Consensus 7 ~~v~IvG~g~tp~~~~-----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~-~~~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGER-----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIG-SGKSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEecccccccc-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-ccchhHHHHHHcCCC-CC
Confidence 6799999999999983 5788999999999999999999999999999998654221 112235677899996 58
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC--CChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS--VNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
|.++|+++|+||+.+|.+|+..|++|++|++|++|+|+|+..++..... ....++...........+++.+++|+++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998765421000 01111111011111235789999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCC
Q 015474 208 GVTRKEQ----DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (406)
Q Consensus 208 g~sre~~----~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~ 283 (406)
|+|+|++ +++++++|+||.+||++ ++ |+++|+|+|+++||+++|
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~np~A-~~------------------------------r~~~t~e~v~~s~~v~~P- 207 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGARNPKA-HL------------------------------RKAVTEEQVLKAPMIAGP- 207 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhcCChh-hc------------------------------CCCCCHHHHhcCCcccCC-
Confidence 9999999 79999999999999887 33 456999999999999986
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec----------CCCCCCCCHHHHHHHHHHHcCCC--
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV----------DPAIMGVGPAVAIPAAVKSAGLQ-- 351 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~----------~p~~~~~~~~~A~~~al~~AGl~-- 351 (406)
++++|||+++|||+|+||+|++.|++++.++.+||++++.... +|..+. .+..+++++|+++||+
T Consensus 208 --l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~ 284 (398)
T PRK06157 208 --LGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDP 284 (398)
T ss_pred --CchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCc
Confidence 7889999999999999999999999999755579999877532 222222 2567999999999998
Q ss_pred CCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 352 LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 352 ~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|||++|+||+|+++++.++|+||||+. |||++||+|++|||+||||++|++|+
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~ 357 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEM 357 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHH
Confidence 79999999999999999999999999983 89999999999999999999999884
No 38
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6.3e-59 Score=469.89 Aligned_cols=318 Identities=19% Similarity=0.181 Sum_probs=261.6
Q ss_pred CCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHH-HHHHcCCC
Q 015474 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFP 126 (406)
Q Consensus 48 ~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~-va~~lGl~ 126 (406)
.|++|+|||+++|||+|. +.+.+..+|+.+|+++||+|+||+++|||.+++++...... +.+.++. ++..+|++
T Consensus 14 ~m~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~ 88 (430)
T PRK06365 14 KSRDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLV 88 (430)
T ss_pred hccCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCC
Confidence 467899999999999983 34677899999999999999999999999998887554333 4455555 47999996
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC---C-ChhhhhhhhhhccCcchHHHHHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---V-NPKVKAFEQAQNCLLPMGVTSEN 202 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~~a~~ 202 (406)
..|+++|+++|+||..+|..|++.|++|.+|+|||+|+|+|+..++..+.. + .+..++.+........|++.+++
T Consensus 89 -~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~r 167 (430)
T PRK06365 89 -PKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVR 167 (430)
T ss_pred -CCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHH
Confidence 599999999999999999999999999999999999999999865322111 1 11111222221112347899999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
|+++||+|+|++++|++++|+||.+||.+ ++ |.++|+|+|+++|++++|
T Consensus 168 y~~~yG~t~e~la~vav~~~~~A~~NP~A-~~------------------------------~~~~t~e~v~~s~~i~~P 216 (430)
T PRK06365 168 HMYEFGTTVEQLAKVSVKNHGNAIHNPFA-QS------------------------------PMKITVEDVRKSPMVSYP 216 (430)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHhhCcHh-hc------------------------------CCCCCHHHHhcCCccccC
Confidence 99999999999999999999999999998 33 346899999999998865
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEe--ecCCCCCC------------------------C-
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV--GVDPAIMG------------------------V- 335 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~--~~~p~~~~------------------------~- 335 (406)
+|++|||+++|||+|+||+|++.|++++.+|+ +|.+.+.. +.++..+. .
T Consensus 217 ---lt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (430)
T PRK06365 217 ---LTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSF 292 (430)
T ss_pred ---cchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEecccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998875 45555443 33332211 1
Q ss_pred -CHHHHHHHHHHHcCCC--CCCccEEEccccchHHHHHHHHHcCCCC------------------CCCCCCCCccccCCc
Q 015474 336 -GPAVAIPAAVKSAGLQ--LDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIGHP 394 (406)
Q Consensus 336 -~~~~A~~~al~~AGl~--~~DID~~e~hd~fa~~~l~~~e~lGl~~------------------~~vN~~GG~~a~Ghp 394 (406)
....+++++|+++||+ ++|||++|+||||+++++.++|+||||+ .|||++||++++|||
T Consensus 293 ~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp 372 (430)
T PRK06365 293 RAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHA 372 (430)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCc
Confidence 1247999999999998 8999999999999999999999999998 399999999999999
Q ss_pred cchhHHHHHhhC
Q 015474 395 LGTTGNCCSNCL 406 (406)
Q Consensus 395 ~GatG~~~v~~l 406 (406)
+||||++|++|+
T Consensus 373 ~GatG~~~~~e~ 384 (430)
T PRK06365 373 VGATGIMQAVFM 384 (430)
T ss_pred ccHHHHHHHHHH
Confidence 999999999874
No 39
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.8e-58 Score=462.51 Aligned_cols=316 Identities=19% Similarity=0.255 Sum_probs=266.2
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|+|||+++|||+|. ++.++.+|+.+|+++||+|+||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~~-----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR-----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 4799999999999984 5788999999999999999999999999999998775433 356788999999995 56
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC----CCCh-hhhhhhhhhccCcchHHHHHHHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG----SVNP-KVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~----~~~~-~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+.++|+++|+||+.+|..|+..|++|.+|++|++|+|+||+.+..... ...+ .+...+.+......+++.+++||
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 779999999999999999999999999999999999999976532110 0011 11111222111223567889999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
++||+|+|++++|++++|++|.+||++ +|++ ++|.|+++++|++++|
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~np~a-~~~~------------------------------~i~~e~v~~s~~i~~P-- 200 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAMNPKA-HFQK------------------------------PVTVEEVLKSRAISWP-- 200 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhcCChh-hcCC------------------------------CCCHHHHhcCCccCCC--
Confidence 999999999999999999999999976 6643 4788899999998865
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEee------cCCCCCCC-CHHHHHHHHHHHcCCCCCCccE
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG------VDPAIMGV-GPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~------~~p~~~~~-~~~~A~~~al~~AGl~~~DID~ 357 (406)
+|++|||+++|||+|+||+|++.|++++.++.++|++++... ..|+.+.. ++..+++++|+++||+++|||+
T Consensus 201 -l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~ 279 (385)
T PRK12578 201 -IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV 279 (385)
T ss_pred -ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 999999999999999999999999999976678999998753 22333333 4568999999999999999999
Q ss_pred EEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||+|+++++.++|+||||+. |||++||+|++|||+||||++|++|+
T Consensus 280 ~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~ 346 (385)
T PRK12578 280 ATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEI 346 (385)
T ss_pred EEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHH
Confidence 99999999999999999999983 99999999999999999999999984
No 40
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=100.00 E-value=6.8e-58 Score=462.26 Aligned_cols=332 Identities=21% Similarity=0.258 Sum_probs=266.1
Q ss_pred CCceEEEEeeeccc-ccC---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCC--CCeEEEEeecCCCC-CCcc
Q 015474 49 GDDVVIVAAYRTAL-CKS---K-------RGGFKDTYPDDLLAPVLKAVIEKTNVDPSE--VGDIVVGTVLAPGS-QRAS 114 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~-~r~---~-------~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~--ID~v~~g~~~~~~~-~~~~ 114 (406)
|++|||||++|||| +|. + .|.+++.++.+|+.+|++++|+|+||+++| ||.+++|++.+... .+.+
T Consensus 11 ~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~ 90 (438)
T PTZ00455 11 AKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGH 90 (438)
T ss_pred cCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccc
Confidence 47899999999999 883 2 467789999999999999999999999999 99999999876542 1467
Q ss_pred HHHHHHHHcCCC------CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC-CC--hhhh-
Q 015474 115 ECRMAAFYAGFP------ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-VN--PKVK- 184 (406)
Q Consensus 115 ~a~~va~~lGl~------~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~-~~--~~~~- 184 (406)
+++.++..+|++ ..+|.++|+++|+||+.||..|+++|++|.+|++||+|+|+||+.|.+.+.. +. ..+.
T Consensus 91 ~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~ 170 (438)
T PTZ00455 91 LGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRR 170 (438)
T ss_pred hHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccc
Confidence 889888888776 5789999999999999999999999999999999999999999876532211 00 0000
Q ss_pred hhh-hhhccCcchHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHcCCC-ccccceeeeeccCCCCCCCCCeeeecc
Q 015474 185 AFE-QAQNCLLPMGVTSENVAHRFG-VTRKEQDQAAVDSHRKAAAATAAGKF-KDEIIPVATKIVDPKTGDEKPVTISVD 261 (406)
Q Consensus 185 ~~~-~~~~~~~~~g~~a~~~~~~~g-~sre~~~~~a~~s~~~A~~~~~ag~~-~~ei~p~~~~~~~~~~~~~~~~~~~~d 261 (406)
... ........+++. .+|+++|| +|||+++.|++++|.++..||.+ +| ++.+. +....|
T Consensus 171 ~~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~nP~A-~~~~~~~t----------------~~~~~d 232 (438)
T PTZ00455 171 QRKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNKNPLA-HMHTRKLS----------------LEFCTG 232 (438)
T ss_pred cccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHh-hccCCCCC----------------ceeecc
Confidence 000 000000013333 38899996 99999999999999999999998 54 22221 112346
Q ss_pred CCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCc----eEEEEEEEEeec----CC---
Q 015474 262 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPI----LGVFRTFAAVGV----DP--- 330 (406)
Q Consensus 262 e~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~----~a~i~g~~~~~~----~p--- 330 (406)
+.+| +.| +++++++.+ +++++|||+++|||+|+||+|++.|++++++| .++|++++..+. +|
T Consensus 233 ~~~~---~~e-~l~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~ 305 (438)
T PTZ00455 233 ASDK---NPK-FLGNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDA 305 (438)
T ss_pred cccc---chh-hhcCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCcccc
Confidence 6666 343 344556554 48899999999999999999999999999887 689999988765 44
Q ss_pred CCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCC------------------CCCCCCCCccccC
Q 015474 331 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIG 392 (406)
Q Consensus 331 ~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~------------------~~vN~~GG~~a~G 392 (406)
..++.+ ..+++++|+++||+++|||++|+||+|+++++.++|+||||+ .|||++||++++|
T Consensus 306 ~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~G 384 (438)
T PTZ00455 306 TRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFG 384 (438)
T ss_pred ccchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcC
Confidence 223333 679999999999999999999999999999999999999998 5999999999999
Q ss_pred CccchhHHHHHhhC
Q 015474 393 HPLGTTGNCCSNCL 406 (406)
Q Consensus 393 hp~GatG~~~v~~l 406 (406)
||+||||++|++|+
T Consensus 385 HP~gAtG~~~v~e~ 398 (438)
T PTZ00455 385 HPVGATGVKQIMEV 398 (438)
T ss_pred CCcchHHHHHHHHH
Confidence 99999999999884
No 41
>PRK08256 lipid-transfer protein; Provisional
Probab=100.00 E-value=5.3e-58 Score=459.90 Aligned_cols=313 Identities=24% Similarity=0.340 Sum_probs=263.6
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
+|+|||+++|||+|. + ++.+..+|+.+|+++||+|+||++++||.+++|+..++.. ....+...+|+. +.|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~----~~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST----SGQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc----hhHHHHHHcCCC-CCC
Confidence 589999999999973 2 4678899999999999999999999999999998776533 123466789993 578
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC--CCC---CCChh---h--hhhhh-hhccCcchHHH
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--WEG---SVNPK---V--KAFEQ-AQNCLLPMGVT 199 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~--~~~---~~~~~---~--~~~~~-~~~~~~~~g~~ 199 (406)
+++++++|+||+.+|..|+++|++|++|++|++|+|+|+..++. +.. .+... + +..+. .......|++.
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA 152 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence 89999999999999999999999999999999999999865431 111 01000 0 00111 01112358899
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCc
Q 015474 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (406)
Q Consensus 200 a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~ 279 (406)
+++|+++||+++|++++|++++|+||.+||++ +| |+++|+|+|+++||+
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~------------------------------~~~~t~e~~~~s~~i 201 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAANNPYA-QF------------------------------RDEYTLEDVLASPMI 201 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hc------------------------------CCCCCHHHHhcCCcc
Confidence 99999999999999999999999999999987 44 346899999999999
Q ss_pred ccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCC----------CHHHHHHHHHHHcC
Q 015474 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV----------GPAVAIPAAVKSAG 349 (406)
Q Consensus 280 ~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~----------~~~~A~~~al~~AG 349 (406)
++| +|++|||+++|||+|+||+|++.|+++++++.++|.+++....+|..+.. ++..+++++|+++|
T Consensus 202 ~~P---l~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag 278 (391)
T PRK08256 202 WGP---LTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAG 278 (391)
T ss_pred cCC---CcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcC
Confidence 976 99999999999999999999999999997777899998887665543321 24679999999999
Q ss_pred CCCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 350 l~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+++|||++|+||+|+++++.++|+||||++ |||++||+|++|||+||||++|++|+
T Consensus 279 ~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~ 353 (391)
T PRK08256 279 IGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAEL 353 (391)
T ss_pred CCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999987 99999999999999999999999984
No 42
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=100.00 E-value=6.6e-59 Score=464.54 Aligned_cols=344 Identities=40% Similarity=0.546 Sum_probs=309.3
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc--CCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dA--gl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~ 126 (406)
|++|+|+|++||||+|..+++++++.+++|...+.++.+++. +|++.+||.+++|++.+.+.++.+++|.+++.+|+|
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 578999999999999965689999999999998888888644 788889999999999988755789999999999998
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC-CCCCCC----Chhhhhhh-hhhccCcchHHHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-AWEGSV----NPKVKAFE-QAQNCLLPMGVTS 200 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~-~~~~~~----~~~~~~~~-~~~~~~~~~g~~a 200 (406)
.++|.++||++|+||++|+..|++.|++|.+|++|++|+|+||+.|+ .++... .+.++..+ ........|++++
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 67999999999999999999999999999999999999999999886 333321 12222222 1222345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCC--CchhhhhhcCC
Q 015474 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN--TSVSELAKLKP 278 (406)
Q Consensus 201 ~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~--~t~e~l~~~~p 278 (406)
++||++||+|||+||+|+++||+||.+||++++| +||+|+++... .+..|+.+|.+ .+.|.+.+++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~----------~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS----------PVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC----------ceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999988 99999987532 47889999999 99999999999
Q ss_pred cccCC-CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCC-CCCcc
Q 015474 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ-LDDID 356 (406)
Q Consensus 279 ~~~~~-g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~-~~DID 356 (406)
+|++. |..|.+|.+++.||++++++++++.++++++++++++.++...+.+|..| ..+..+++++|++++|. .+|||
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 99876 79999999999999999999999999999999999999999999999988 89999999999999999 99999
Q ss_pred EEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhhC
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|.+|+|..+.+.+.+.+|+ .|||++||+|++|||+||||+++++||
T Consensus 309 l~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l 356 (392)
T COG0183 309 LAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVEL 356 (392)
T ss_pred ceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHH
Confidence 999999999999999999999 899999999999999999999999885
No 43
>PRK06059 lipid-transfer protein; Provisional
Probab=100.00 E-value=6.5e-57 Score=453.16 Aligned_cols=317 Identities=20% Similarity=0.226 Sum_probs=262.6
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++|+|||+++|||+|. +.++.+|+.+|+++||+|+||++++||.+++++..+........++.++..+|++ +
T Consensus 3 ~~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 3 PEPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 36899999999999983 3467999999999999999999999999999887765442344578899999994 6
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC-C-CCCCCC-hhhhhh-hhhhccCcchHHHHHHHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-A-WEGSVN-PKVKAF-EQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~-~-~~~~~~-~~~~~~-~~~~~~~~~~g~~a~~~~ 204 (406)
.++++++.+|+||+.+|.+|+++|++|.+|++|++|+|+|+.... . .+.... ..+... +.+......|++.+++|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRM 155 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999985211 1 111111 111111 111111236899999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
++||+++|+++.+++++|++|..||++ + +|+++|+|+|+++||+++|
T Consensus 156 ~~yg~s~e~~a~v~~~~~~~a~~Np~A-~------------------------------~r~~~t~e~v~~s~~i~~P-- 202 (399)
T PRK06059 156 DLYGATVEDFAQVKVKNARHGLLNPNA-R------------------------------YRKEVTVEDVLASPVVSDP-- 202 (399)
T ss_pred HHhCCCHHHHHHHHHHHHHHHccCcHh-h------------------------------cCCCCCHHHHhcCCcccCC--
Confidence 999999999999999999999888877 3 3557999999999999976
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhc--CCCceEEEEEEEEee-cCC----CCCCCC-------H-------HHHHHH
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRK--GLPILGVFRTFAAVG-VDP----AIMGVG-------P-------AVAIPA 343 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~--g~~~~a~i~g~~~~~-~~p----~~~~~~-------~-------~~A~~~ 343 (406)
+|++|||+++|||+|+||+|++.|+++ +.++.+||.+++... ..+ .....+ + ..++++
T Consensus 203 -l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~ 281 (399)
T PRK06059 203 -LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDA 281 (399)
T ss_pred -CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHH
Confidence 889999999999999999999999999 666667999988754 111 111111 1 367999
Q ss_pred HHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhh
Q 015474 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 344 al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+|+++||+++|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||++|++|
T Consensus 282 a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e 361 (399)
T PRK06059 282 AYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCE 361 (399)
T ss_pred HHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHH
Confidence 9999999999999999999999999999999999974 9999999999999999999999988
Q ss_pred C
Q 015474 406 L 406 (406)
Q Consensus 406 l 406 (406)
+
T Consensus 362 ~ 362 (399)
T PRK06059 362 L 362 (399)
T ss_pred H
Confidence 4
No 44
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5e-57 Score=454.37 Aligned_cols=324 Identities=21% Similarity=0.271 Sum_probs=258.3
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCC--CccHHHHHHHHcCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ--RASECRMAAFYAGFPE 127 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~--~~~~a~~va~~lGl~~ 127 (406)
++|+|||+++|||+|+ +..++.++.+|+.+|+++||+|+||++++||.+++++..++... ............++ .
T Consensus 3 ~~v~Ivg~~~t~~~r~--~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (403)
T PRK06289 3 DDVWVLGGYQSDFARN--WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPAL-W 79 (403)
T ss_pred CcEEEEeCCcCccccc--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcC-C
Confidence 5799999999999984 44568899999999999999999999999999999987554220 11111112233355 2
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-CCCCC-hhhhhh-hh-hhcc-CcchHHHHHH
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-EGSVN-PKVKAF-EQ-AQNC-LLPMGVTSEN 202 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-~~~~~-~~~~~~-~~-~~~~-~~~~g~~a~~ 202 (406)
+.|+++++++|+||+.+|..|+.+|++|++|+||++|+|+|+..|... ...+. ..+.+. .. .... ...|++.+++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 468999999999999999999999999999999999999998755311 10110 011111 00 0011 1237899999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
||++||++||++++|++++|++|.+||++ +++..+.+ ++++.|++..++++.
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~NP~A-~~~~~~~~-------------------------~~~~~~d~~~s~~i~-- 211 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARRNPNA-QTRGWAFP-------------------------DEATNDDDATNPVVE-- 211 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHccCcHh-hcCccccc-------------------------cccchhhhhcCCccc--
Confidence 99999999999999999999999999999 66543210 147778888888775
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCC-CceEEEEEEEEeecC-------------CCCCCCCHHHHHHHHHHHc
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVD-------------PAIMGVGPAVAIPAAVKSA 348 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~-~~~a~i~g~~~~~~~-------------p~~~~~~~~~A~~~al~~A 348 (406)
+++|++|||+++|||+|+||+|++.|++++. ++.++|++++..... |..+ ..+..|++++|++|
T Consensus 212 -~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~A 289 (403)
T PRK06289 212 -GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRA 289 (403)
T ss_pred -CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHc
Confidence 4599999999999999999999999999986 677899999876321 1122 12567999999999
Q ss_pred CCCCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 349 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 349 Gl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
||+++|||++|+||+|++++++++|+||||++ |||++||+|++|||+||||++|++|+
T Consensus 290 gi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~ 365 (403)
T PRK06289 290 GVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDA 365 (403)
T ss_pred CCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHH
Confidence 99999999999999999999999999999984 89999999999999999999999984
No 45
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.3e-56 Score=449.90 Aligned_cols=317 Identities=23% Similarity=0.282 Sum_probs=268.2
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCC-CccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~-~~~~a~~va~~lGl~~ 127 (406)
|++|+|||+++|||+|. .+.++.+|+.++++++|+|+|+++++||.+++|+..++... ..++++.++..+|++
T Consensus 1 m~~v~IvG~~~tp~~~~-----~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~- 74 (389)
T PRK06064 1 MRDVAIIGVGQTKFGEL-----WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA- 74 (389)
T ss_pred CCcEEEEEcccccceec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-
Confidence 47899999999999873 57899999999999999999999999999999987654431 255788899999995
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCC----CCCChhhhhhhhhhccCcchHHHHHHH
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE----GSVNPKVKAFEQAQNCLLPMGVTSENV 203 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (406)
..|.++++++|+||+.+|..|++.|++|.+|++|++|.|+++..+.... ....+..++.+........|++.+++|
T Consensus 75 ~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~ 154 (389)
T PRK06064 75 PIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRY 154 (389)
T ss_pred CCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999987653110 011111122222211123688899999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCC
Q 015474 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (406)
Q Consensus 204 ~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~ 283 (406)
+++||+|||+++++++++|++|.+||++ +| |+++|.|+++++||+++|
T Consensus 155 ~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~------------------------------~~~~t~~~~~~s~~i~~P- 202 (389)
T PRK06064 155 MHKYGTTEEDLALVAVKNHYNGSKNPYA-QF------------------------------QKEITVEQVLNSPPVADP- 202 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhhCcHh-hh------------------------------CCCCCHHHHhcCCcccCC-
Confidence 9999999999999999999999999997 44 335899999999999976
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCC------CC-CCCCHHHHHHHHHHHcCCCCCCcc
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP------AI-MGVGPAVAIPAAVKSAGLQLDDID 356 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p------~~-~~~~~~~A~~~al~~AGl~~~DID 356 (406)
+|++|||+++|||+++||++++.|++++.++. +|.|++.....+ +. ...++..+++++|+++||+++|||
T Consensus 203 --l~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 203 --LKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred --CchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999987765 999998765432 22 223456799999999999999999
Q ss_pred EEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|+||+|++++++++|+||||++ |||++||+|++|||+||||+++++|+
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~ 347 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEI 347 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHH
Confidence 999999999999999999999873 99999999999999999999999874
No 46
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.4e-56 Score=442.61 Aligned_cols=313 Identities=18% Similarity=0.188 Sum_probs=255.6
Q ss_pred CCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-CCCCeEEEEeecCCCCCC-ccHHHHHHHHcC
Q 015474 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDP-SEVGDIVVGTVLAPGSQR-ASECRMAAFYAG 124 (406)
Q Consensus 48 ~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAg-l~~-~~ID~v~~g~~~~~~~~~-~~~a~~va~~lG 124 (406)
.|++|+|||+++|||+|. ..+.+..+|+.+|+++||+||| |++ +|||.+++++. +...+ ......++..+|
T Consensus 2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~--~~~~~~~~~~~~~~~~lg 75 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE--DFWEGIAIADEFAPDQIG 75 (385)
T ss_pred CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC--cccCcccccchhHHHHcc
Confidence 478999999999999962 1367889999999999999999 997 79999988642 11101 122234667888
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC---CCChhhhhhhhhhcc-CcchHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---SVNPKVKAFEQAQNC-LLPMGVTS 200 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~---~~~~~~~~~~~~~~~-~~~~g~~a 200 (406)
+. ..|.+.+ |+||..++..|+.+|++|.+|+||++|+|+|+... .+.. ...+..++.|.+... ...+++.+
T Consensus 76 ~~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~-~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 76 GA-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDIL-TFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cC-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCcc-chhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 83 4677776 89999999999999999999999999999987521 1110 111111222322211 12468999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcc
Q 015474 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280 (406)
Q Consensus 201 ~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~ 280 (406)
++||++||+++|+++++++++|+||.+||+| +| |+++|+|++++++++.
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A-~~------------------------------r~~~t~edvl~S~~ia 199 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRA-SY------------------------------ASNISLEDVLSSEYVV 199 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChh-hc------------------------------CCCCCHHHHhcCCccc
Confidence 9999999999999999999999999999999 44 4469999999999999
Q ss_pred cCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEee----cCCCCCCCCHH--HHHHHHHHHcCCC--C
Q 015474 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----VDPAIMGVGPA--VAIPAAVKSAGLQ--L 352 (406)
Q Consensus 281 ~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~----~~p~~~~~~~~--~A~~~al~~AGl~--~ 352 (406)
+| +|++|||+++|||+|+||+|++.|++++.+|+ +|.+++... ..+..+...+. .+++++|++|||+ +
T Consensus 200 ~P---l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~ 275 (385)
T PRK06066 200 YP---LTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPR 275 (385)
T ss_pred CC---chhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCH
Confidence 76 99999999999999999999999999998887 899887743 23444444553 6999999999998 7
Q ss_pred CCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 353 DDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 353 ~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|||++|+||+|+++++.++|+||||+. |||++||++++|||+||||++|++|+
T Consensus 276 ~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~ 347 (385)
T PRK06066 276 KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDA 347 (385)
T ss_pred HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHH
Confidence 9999999999999999999999999972 79999999999999999999999984
No 47
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.9e-56 Score=445.20 Aligned_cols=314 Identities=17% Similarity=0.173 Sum_probs=260.9
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCC-ccHHHHHHHHcCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFPET 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~-~~~a~~va~~lGl~~~ 128 (406)
++|+|||++.|||+|. .+.+..+|+.+|+++||+|+||+++|||.+++++. ++...+ ...+..++..+|+. +
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~ 81 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-R 81 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-C
Confidence 5799999999999984 36788999999999999999999999999999863 222211 33666788999984 5
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC---CCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---SVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
.|++.|+.+|+||..+|..|+.+|++|.+|+|||+|+|+|+........ ...+.+++.|.+......+++.+++||+
T Consensus 82 ~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 82 KPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMA 161 (392)
T ss_pred CCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999998653111000 0011122223332222347889999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
+||+++|+++++++++|+||.+||+| +| |+++|+|+++++||+.+|
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~NP~A-~~------------------------------r~~lt~e~vl~s~~ia~P--- 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALNNPYA-QL------------------------------GSKITVEDVLKSEVLVWP--- 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhccCchh-hh------------------------------cCCCCHHHHhcCCcccCC---
Confidence 99999999999999999999999998 44 446999999999999976
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC-------CCCCCHHHHHHHHHHHcCCCC--CCcc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQL--DDID 356 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-------~~~~~~~~A~~~al~~AGl~~--~DID 356 (406)
+|++|||+++|||+|+||+|++.|++++.+|+ +|.+++... ++. ....++..+++++|+++|+++ +|||
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD 285 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTL-DNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEID 285 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEec-CccccccccccccHHHHHHHHHHHHHcCCCCchhhCc
Confidence 99999999999999999999999999998775 788887742 221 112234679999999999985 9999
Q ss_pred EEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
++|+||||+++++.++|+||||++ |||++||++++|||+||||++|++|+
T Consensus 286 ~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~ 353 (392)
T PRK06065 286 VAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISI 353 (392)
T ss_pred EEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHH
Confidence 999999999999999999999984 99999999999999999999999874
No 48
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=100.00 E-value=2.3e-56 Score=446.46 Aligned_cols=310 Identities=26% Similarity=0.325 Sum_probs=267.0
Q ss_pred EEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE
Q 015474 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (406)
Q Consensus 55 vg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v 134 (406)
||+++|||+|. .+.++.+|+.+|+++||+|+|+++++||.+++|+..+... ...+++.++..+|++ ..+.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 68999999984 2789999999999999999999999999999998876543 367889999999996 7899999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC--CCCCCChhhhh---hhhhhccCcchHHHHHHHHHHcCC
Q 015474 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--WEGSVNPKVKA---FEQAQNCLLPMGVTSENVAHRFGV 209 (406)
Q Consensus 135 ~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~~a~~~~~~~g~ 209 (406)
+++|+|++.+|..|++.|++|.+|++|++|+|+|+..+.. ......+..+. ..........|++.+++|+++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999976531 01011111111 011111234689999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccC
Q 015474 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289 (406)
Q Consensus 210 sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~ 289 (406)
|+|+++.|++++|+||.+||++ +|+ .++|+|+++++||+++| +|++
T Consensus 154 t~e~~~~va~~~~~~A~~np~A-~~~------------------------------~~~t~d~~~~~~~i~~p---l~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAARNPYA-QFR------------------------------KPITVEDVLNSRMIADP---LRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCcccCC---Cchh
Confidence 9999999999999999999998 653 35899999999999965 9999
Q ss_pred CCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC-------CCCCHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-------MGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 290 ~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-------~~~~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
|||+++|||+|+||+|++.|+++ .++.++|++++.....+.. +..++..+++++|++|||+++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999999 6677899999987654432 455678899999999999999999999999
Q ss_pred cchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 363 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 363 ~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+++++.++|+||||++ |||++||++++|||+|+||+++++|+
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~ 340 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEA 340 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHH
Confidence 999999999999999983 99999999999999999999999874
No 49
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.1e-56 Score=448.06 Aligned_cols=313 Identities=25% Similarity=0.272 Sum_probs=254.4
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCC-CccHHHHHHHHcCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPE 127 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~-~~~~a~~va~~lGl~~ 127 (406)
|++|+|||+++|||+|. .+.++.+|+.+|+++||+|+|+++++||.+++|+..++... ....+..+...+|+ .
T Consensus 1 ~~~v~Ivg~g~tpfgr~-----~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl-~ 74 (389)
T PRK07516 1 MMTASIVGWAHTPFGKL-----DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL-R 74 (389)
T ss_pred CCcEEEEeCCcceeeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC-C
Confidence 57899999999999983 57889999999999999999999999999999987544321 12223334456677 4
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCC------CCChhhhhhhhhhccCcchHHHHH
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVNPKVKAFEQAQNCLLPMGVTSE 201 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~a~ 201 (406)
..|+++|+++|+||+.+|..|+..|++|.+|++|++|+|+||..|..... .+....+..+. .....|++.++
T Consensus 75 ~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~a~ 152 (389)
T PRK07516 75 FKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPG--GFAGVFGRIAQ 152 (389)
T ss_pred CCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCC--CcHHHHHHHHH
Confidence 78999999999999999999999999999999999999999876542110 01000000110 11125899999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchh----hhhhcC
Q 015474 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVS----ELAKLK 277 (406)
Q Consensus 202 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e----~l~~~~ 277 (406)
+|+++||++||++++|++++|+||.+||.+ +|++ ++|+| .+.+++
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A-~~~~------------------------------~~t~~~~~~~~~~~~ 201 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYA-QMRK------------------------------DLGFEFCRTVSEKNP 201 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChh-hcCC------------------------------cccHHhhhhhhhcCC
Confidence 999999999999999999999999999998 4432 34444 355667
Q ss_pred CcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-------CCCCCCCCHHHHHHHHHHHcCC
Q 015474 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-------DPAIMGVGPAVAIPAAVKSAGL 350 (406)
Q Consensus 278 p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-------~p~~~~~~~~~A~~~al~~AGl 350 (406)
++.+ ++|++|||+++|||+|+||+|++.|++++. .++|.+++.... +|. ...++..+++++|+++||
T Consensus 202 ~i~~---pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl 275 (389)
T PRK07516 202 LVAG---PLRRTDCSLVSDGAAALVLADAETARALQR--AVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGV 275 (389)
T ss_pred cccC---CCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCC
Confidence 7765 499999999999999999999999999953 358999887532 221 224567899999999999
Q ss_pred CCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 351 ~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+++|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||++|++|+
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~ 349 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLA 349 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999986 99999999999999999999999874
No 50
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.1e-56 Score=442.22 Aligned_cols=315 Identities=18% Similarity=0.187 Sum_probs=263.4
Q ss_pred CCceEEEEeeeccc-ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCC-ccHHHHHHHHcCCC
Q 015474 49 GDDVVIVAAYRTAL-CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFP 126 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~-~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~-~~~a~~va~~lGl~ 126 (406)
|++|+|||+++||| +|. .+.++.+|+.+|+++||+|+||+++|||.+++++ .++...+ ..++..++..+|+.
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC
Confidence 57899999999999 663 4678999999999999999999999999999987 2332211 24456788999994
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (406)
..++++++.+|+||..++..|++.|++|.+|+|||+|+|+++.....+....... ++.+........+++.+++|+++
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~-~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVP-FTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccc-cccccccchHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999876421111111111 11222222234578889999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCc
Q 015474 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (406)
Q Consensus 207 ~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~l 286 (406)
||+++|+++++++++|++|.+||+| +|++ +++|+|+++++||+++| +
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A-~~r~-----------------------------~~~t~e~v~~s~~ia~P---l 200 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYA-HLHQ-----------------------------PDITLEKVMASQMLWDP---I 200 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHH-hcCC-----------------------------CCCCHHHHhcCCcccCC---C
Confidence 9999999999999999999999998 5532 13899999999999976 9
Q ss_pred ccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC-------CCCCCHHHHHHHHHHHcCCC--CCCccE
Q 015474 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQ--LDDIDL 357 (406)
Q Consensus 287 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-------~~~~~~~~A~~~al~~AGl~--~~DID~ 357 (406)
|++|||+++|||+|+||+|+++|++++.++.+||.|++... ++. ....+...+++++|+++||+ ++|||+
T Consensus 201 ~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~ 279 (386)
T PRK08313 201 RFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDV 279 (386)
T ss_pred chhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCE
Confidence 99999999999999999999999999888888999998753 332 22235568999999999998 699999
Q ss_pred EEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 358 ~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+|+||||+++++.++|+||||++ |||++||+++ |||.|+||++|++|+
T Consensus 280 ~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~ 345 (386)
T PRK08313 280 AEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEA 345 (386)
T ss_pred EEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHH
Confidence 99999999999999999999986 9999999999 999999999999884
No 51
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=2e-55 Score=440.56 Aligned_cols=324 Identities=32% Similarity=0.460 Sum_probs=270.8
Q ss_pred EEeeecccccCCC--CCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHH-HHHHcCCCCCCce
Q 015474 55 VAAYRTALCKSKR--GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFPETVPV 131 (406)
Q Consensus 55 vg~~~tp~~r~~~--g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~-va~~lGl~~~~~~ 131 (406)
+|++||||+|... |.+....+.+|+.+|++++|++++|+|++||.+++|+..+... +..+++. +...+|+ .++|+
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p~ 78 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAPA 78 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCcE
Confidence 5889999998432 7778899999999999999999999999999999999987765 5677774 5556676 57899
Q ss_pred EEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCH
Q 015474 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 211 (406)
Q Consensus 132 ~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sr 211 (406)
++|+++|+||+.++..|+..|++|.+|++|++|+|+||..+... . .... ...+..+|+ +|
T Consensus 79 ~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~---~--------------~~~~--~~~~~~~~~-~r 138 (393)
T cd00826 79 IGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENN---A--------------KEKH--IDVLINKYG-MR 138 (393)
T ss_pred EEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccc---c--------------ccch--hHHHHHHhC-Ch
Confidence 99999999999999999999999999999999999998754210 0 0000 022456788 89
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCC--CCCchhhhhhcCCcccCCCCcccC
Q 015474 212 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIR--PNTSVSELAKLKPVFKKDGTTTAG 289 (406)
Q Consensus 212 e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r--~~~t~e~l~~~~p~~~~~g~lt~~ 289 (406)
++++.+++.++..+....+.|.++++|+||.++.++ |. .....|+..| +++|+|++++++|+|.+++++|++
T Consensus 139 ~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~---~~---~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~ 212 (393)
T cd00826 139 ACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRK---GD---IHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAG 212 (393)
T ss_pred hhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCC---CC---EEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEech
Confidence 999999999999999999999999999999887521 10 2344455444 679999999999999666789999
Q ss_pred CCCCCCCcceEEEecCHHHHHhcCC-------CceEEEEEEEEeecCCC----CCCCCHHHHHHHHHHHcCCCCCCccEE
Q 015474 290 NSSQVSDGAGAVLLMKRSVAMRKGL-------PILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (406)
Q Consensus 290 ~~~~~~DGAaAvvL~s~~~A~~~g~-------~~~a~i~g~~~~~~~p~----~~~~~~~~A~~~al~~AGl~~~DID~~ 358 (406)
|||+++|||+|+||+|++.|+++++ .+++++.++.....+|. .+..+++.|++++|+++||+++|||++
T Consensus 213 ~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~ 292 (393)
T cd00826 213 NACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLI 292 (393)
T ss_pred hcCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCee
Confidence 9999999999999999999999986 23344444444444555 466788999999999999999999999
Q ss_pred EccccchHHHHHHHHHcCCCC------------------CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 359 EINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 359 e~hd~fa~~~l~~~e~lGl~~------------------~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+||+|+++++.++|+||||+ .|||++||+|++|||+||||++|++|+
T Consensus 293 Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~ 358 (393)
T cd00826 293 EAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAEL 358 (393)
T ss_pred ehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHH
Confidence 999999999999999999998 699999999999999999999999985
No 52
>PRK06158 thiolase; Provisional
Probab=100.00 E-value=1.4e-55 Score=440.78 Aligned_cols=309 Identities=22% Similarity=0.243 Sum_probs=257.0
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|+|||+++|||+|. .+.++.+|+.+|+++||+|+||+++|||.+++++... ..+...++..+|++ ..
T Consensus 8 ~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~-----~~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 8 GRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD-----ALWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-----CCcHHHHHHHcCCC-Ce
Confidence 7899999999999874 4778999999999999999999999999999987431 22335688999994 57
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEE-eecCCCCCCCCCCCCCChhhhhhhhh-hccCcchHHHHHHHHHHc
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA-GLESMTVNPMAWEGSVNPKVKAFEQA-QNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~-G~E~ms~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~a~~~~~~~ 207 (406)
+.+.++.+|+|+..+|..|++.|++|.+|+|||+ |.|+++.... ......+..++.+.+ ......+++.+++||++|
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~y 155 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGK-LRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQY 155 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCccc-ccccccccchhcccCCCCcHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999986 7777663211 111111111222222 112335788999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcc
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 287 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt 287 (406)
|+|+|+++++++++|+||.+||++ +| |+++|+|+++++||+.+| +|
T Consensus 156 G~t~e~~a~vav~~~~~a~~NP~A-~~------------------------------~~~~t~e~vl~s~~ia~P---l~ 201 (384)
T PRK06158 156 GTTREQLAEVAVAARQWAQLNPEA-FM------------------------------RDPLTIDDVLAARMVSDP---LS 201 (384)
T ss_pred CcCHHHHHHHHHHHHHHHhcCchh-hh------------------------------CCCCCHHHHhcCCccCCC---Cc
Confidence 999999999999999999999998 54 446999999999999876 99
Q ss_pred cCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec------CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV------DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 288 ~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~------~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
++|||+++|||+|+||+|++.|++++.++ .+|++++.... .|+....+...+++++|++|||+++|||++|+|
T Consensus 202 ~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~Ely 280 (384)
T PRK06158 202 VRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELY 280 (384)
T ss_pred hhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 99999999999999999999999998776 47888876532 122222344679999999999999999999999
Q ss_pred ccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 362 EAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 362 d~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|||++++++++|+||||+. |||++||++++||| |+||++|++|+
T Consensus 281 D~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~ 342 (384)
T PRK06158 281 DAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEA 342 (384)
T ss_pred CCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHH
Confidence 9999999999999999986 99999999999999 99999999884
No 53
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.4e-55 Score=433.77 Aligned_cols=311 Identities=19% Similarity=0.197 Sum_probs=257.6
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|+|||+++|||+|. .+.++.+|+.+|+++||+||||+++|||.++++... . +.. ...++..+|+ ...
T Consensus 5 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~-~---~~~-~~~~~~~lGl-~~~ 73 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA-P---GLG-PASMVDYLGL-KLR 73 (388)
T ss_pred CCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-C---Ccc-HHHHHHhCCC-CCe
Confidence 6899999999999984 467889999999999999999999999997653211 1 111 1348899999 467
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC------CCCCCChhhhhhhhhhccCcchHHHHHHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA------WEGSVNPKVKAFEQAQNCLLPMGVTSENV 203 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (406)
+...++.+|+|+..+|..|+..|++|.+|+|||+|+|+++..... +.....+..++.+.+......+++.+++|
T Consensus 74 ~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~y 153 (388)
T PRK08142 74 HVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRH 153 (388)
T ss_pred eeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHH
Confidence 889999999999999999999999999999999999998642111 11001111122232222234578899999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCC
Q 015474 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (406)
Q Consensus 204 ~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~ 283 (406)
|++||+++|+++.+++++|+||.+||+| +| |+++|+|+++++|+|.+|
T Consensus 154 m~~yG~t~e~la~vav~~~~~A~~NP~A-~~------------------------------r~~~t~e~vl~s~~Ia~P- 201 (388)
T PRK08142 154 MHEYGTTSEQLAWIKVAASHHAQHNPHA-ML------------------------------RDVVTVEDVLNSPMIADP- 201 (388)
T ss_pred HHHHCcCHHHHHHHHHHHHHHhccCChh-hc------------------------------CCCCCHHHHhcCCcccCC-
Confidence 9999999999999999999999999998 54 446899999999999986
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~ 358 (406)
+|+++||+++|||+|+||+|++.|++++.++ .+|.+++.... .|+....+...+++++|++||++++|||++
T Consensus 202 --l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~ 278 (388)
T PRK08142 202 --LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYA 278 (388)
T ss_pred --chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 9999999999999999999999999998554 69999987532 233333345679999999999999999999
Q ss_pred EccccchHHHHHHHHHcCCCCC-------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 359 EINEAFASQFVYCRNKLGLDPE-------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 359 e~hd~fa~~~l~~~e~lGl~~~-------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
|+||||+++++.++|+||||++ |||++||+++.|||+||||++|++|+
T Consensus 279 elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~ 345 (388)
T PRK08142 279 SIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEA 345 (388)
T ss_pred EEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHH
Confidence 9999999999999999999863 89999999999999999999999884
No 54
>PRK07937 lipid-transfer protein; Provisional
Probab=100.00 E-value=4.9e-53 Score=415.99 Aligned_cols=309 Identities=17% Similarity=0.150 Sum_probs=245.9
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCH-HHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCc-cHHHHHHHHcCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYP-DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA-SECRMAAFYAGFP 126 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~-~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~-~~a~~va~~lGl~ 126 (406)
|++|+|||+++|||+|.. .+.+. .+|+.+|+++||+||||+++|||.++.+.. +...+. .........+|+.
T Consensus 1 M~~vaIvG~g~t~~~~~~----~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~ 74 (352)
T PRK07937 1 MRDVAVVGFAQAPHVRRT----DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAV 74 (352)
T ss_pred CCcEEEEEeeccccccCC----CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCC
Confidence 578999999999999842 13444 899999999999999999999998865432 222121 1222345667873
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCC--CCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--WEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
...|...++ ++|..+|..|+.+|++|.+|+|||+|+|+|+..... ..... +.+++.|.+......+++.+++||
T Consensus 75 ~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~-~~~~~~p~G~~~~~~~Al~a~~ym 150 (352)
T PRK07937 75 PPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQL-DPYTVAPLWPDSVSMAGLQARAGL 150 (352)
T ss_pred CCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccC-CcceeccCCCchHHHHHHHHHHHH
Confidence 345566665 468889999999999999999999999998641110 00011 112222322223345888999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
++||.++|+++++++++|+||.+||+| +| | +|+|+++++|++.+|
T Consensus 151 ~~yG~t~e~lA~vavk~r~nA~~NP~A-~~------------------------------r--it~edvl~s~~ia~P-- 195 (352)
T PRK07937 151 DAGKWTEEQMAEVAARSRADARRNPSA-EP------------------------------S--ISVDELLARPYFADP-- 195 (352)
T ss_pred HHhCCCHHHHHHHHHHHHHHHhhCchh-hc------------------------------c--CCHHHHhcCCcccCC--
Confidence 999999999999999999999999998 32 4 899999999999976
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCC---CCHHHHHHHHHHHc-CCCCCCccEEEc
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSA-GLQLDDIDLFEI 360 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~---~~~~~A~~~al~~A-Gl~~~DID~~e~ 360 (406)
+|++|||+++|||+|+||+|++.|++++.+| ++|.+++... ++..+. ..+..+++++++++ |++++|||++|+
T Consensus 196 -L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~-~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei 272 (352)
T PRK07937 196 -LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRI-ESPSLGARDLTRSPSTALAAEAATGGDAGGVDVAEL 272 (352)
T ss_pred -chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEee-CCccccccccccHHHHHHHHHHhcCCCHHHCCEEEE
Confidence 9999999999999999999999999999888 7999998854 332222 34556777888885 999999999999
Q ss_pred cccchHHHHHHHHHcCCCC-CCCCCCCCccccCCccchhHHHHHhhC
Q 015474 361 NEAFASQFVYCRNKLGLDP-EKINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 361 hd~fa~~~l~~~e~lGl~~-~~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
||+|+++++.++|+|||+. .|||++||+|+ |||+||||++|++|+
T Consensus 273 ~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~ 318 (352)
T PRK07937 273 HAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEA 318 (352)
T ss_pred eCCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHH
Confidence 9999999999999999976 59999999999 999999999999884
No 55
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=100.00 E-value=6.7e-53 Score=400.69 Aligned_cols=252 Identities=46% Similarity=0.714 Sum_probs=209.0
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|++||||++.||||++ +.|.|++.++.+|+.++++++|++++|+|++||.+++|++.+... +.+++|.+++.+|||.+
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 7999999999999997 789999999999999999999999999999999999999999887 89999999999999988
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC-----CCCCCh-----h-hhhhhhhhccCcchH
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-----K-VKAFEQAQNCLLPMG 197 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~-----~~~~~~-----~-~~~~~~~~~~~~~~g 197 (406)
+|+++|+++|+||++||..|+..|++|.+|++|++|+|+||+.|+.. +..++. . +........+..+||
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999988632 222332 1 111122345667899
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcC
Q 015474 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (406)
Q Consensus 198 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~ 277 (406)
.++|+++++||||||+||+||++||++|.+++++|+|++||+||+++.++ | ++.+++.||++|+++|+|+|.++|
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~---g--~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK---G--EEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT---S--EEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc---c--ceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999986532 2 236899999999999999999999
Q ss_pred CcccCC-CCcccCCCCCCCCcceEEEecCHH
Q 015474 278 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRS 307 (406)
Q Consensus 278 p~~~~~-g~lt~~~~~~~~DGAaAvvL~s~~ 307 (406)
|+|.++ |++|++|+|+++|||+++||+|+|
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999997 999999999999999999999986
No 56
>PRK07855 lipid-transfer protein; Provisional
Probab=100.00 E-value=9.3e-51 Score=405.64 Aligned_cols=307 Identities=17% Similarity=0.130 Sum_probs=245.9
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
++|+|||+++|+|+|. .+.++.+|+.+|+++||+||||+++|||.+++++. ... ....++..+|+....
T Consensus 4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~----~~~~l~~~lGl~~~~ 72 (386)
T PRK07855 4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DTN----PEIAVARALGIGELK 72 (386)
T ss_pred CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--ccc----cHHHHHHHCCCCCCc
Confidence 5799999999999984 46789999999999999999999999999987442 111 124588899994225
Q ss_pred ceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEee--cCCCCCC-CCCCCC---C-C---hhhhhhhhhh-ccCcchHH
Q 015474 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL--ESMTVNP-MAWEGS---V-N---PKVKAFEQAQ-NCLLPMGV 198 (406)
Q Consensus 130 ~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~--E~ms~~~-~~~~~~---~-~---~~~~~~~~~~-~~~~~~g~ 198 (406)
+..+|+.+|+|+..+|..|+..|++|.+|+||++|+ +.+.... ..+... . . +.-++.+.+. .....+++
T Consensus 73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al 152 (386)
T PRK07855 73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAM 152 (386)
T ss_pred ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHH
Confidence 667899999999999999999999999999999998 3321100 000000 0 0 0111222221 11234788
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCC
Q 015474 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (406)
Q Consensus 199 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p 278 (406)
.+++||++||+|+|+++++++++|+||.+||+| +|+ |+++|+|+++++|+
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A-~~~-----------------------------~~~~t~e~vl~s~~ 202 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAATNPKA-WFY-----------------------------GRPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHh-hhc-----------------------------CCCCCHHHHhcCCc
Confidence 999999999999999999999999999999998 542 23699999999999
Q ss_pred cccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC----------CCCC--CHHHHHHHHHH
Q 015474 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA----------IMGV--GPAVAIPAAVK 346 (406)
Q Consensus 279 ~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~----------~~~~--~~~~A~~~al~ 346 (406)
|.+| +|++|||+++|||+|+||+|++.|++++.+|+ +|.+++... ++. .+.. ....+++++|+
T Consensus 203 Ia~P---l~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~-~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~ 277 (386)
T PRK07855 203 IAEP---LRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGS-GADQYMMTSYYRDDITGLPEMGLVARQLWA 277 (386)
T ss_pred ccCC---chhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEec-CCccccccccccccccccchHHHHHHHHHH
Confidence 9876 99999999999999999999999999988875 899988743 221 1111 12369999999
Q ss_pred HcCCCCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhh
Q 015474 347 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 347 ~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+|||+++|||++|+||||+++++.++|+||||++ ||||+||+++.|||. |+.|++|
T Consensus 278 ~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E 351 (386)
T PRK07855 278 QSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAE 351 (386)
T ss_pred HcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHH
Confidence 9999999999999999999999999999999973 999999999999998 6666665
No 57
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=1.6e-48 Score=400.01 Aligned_cols=318 Identities=20% Similarity=0.187 Sum_probs=252.1
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~--~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
+.|+|||+++|+|+|...+ ...++.+|+.+|+++||+|+|++ +++||.+++++..... ..+....++..+|+.
T Consensus 4 ~~~~IVGvG~t~~~~~~~~--~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lGl~- 78 (498)
T PRK08257 4 RTPVIVGVGQVTERPDDPA--YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLGAD- 78 (498)
T ss_pred CcEEEEEeeecccccCCcc--cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcCCC-
Confidence 7899999999999873211 11488999999999999999999 9999999988765332 345678899999994
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCC--------CCCCC----C----C-----hhhhhh
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM--------AWEGS----V----N-----PKVKAF 186 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~--------~~~~~----~----~-----~~~~~~ 186 (406)
..+......+|.|++.+|..|+..|++|++|+||++|+|+|++.+. .|... + . ..-++.
T Consensus 79 p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (498)
T PRK08257 79 PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAEL 158 (498)
T ss_pred CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhh
Confidence 4556667788889999999999999999999999999999876421 01100 0 0 000111
Q ss_pred hhhhc-cCcchHHHHHHHHHHcCCCHHH-HHHHH---HHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeecc
Q 015474 187 EQAQN-CLLPMGVTSENVAHRFGVTRKE-QDQAA---VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261 (406)
Q Consensus 187 ~~~~~-~~~~~g~~a~~~~~~~g~sre~-~~~~a---~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~d 261 (406)
+.+.. ....+++.+.+|+++||+|+|+ +++++ +++|++|.+||+| ||
T Consensus 159 ~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A-~~--------------------------- 210 (498)
T PRK08257 159 RHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHA-WI--------------------------- 210 (498)
T ss_pred hcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHH-hh---------------------------
Confidence 11111 1235788899999999999998 34444 4899999999998 55
Q ss_pred CCCCCCCchhhhh----hcCCcccCCCCcccCCCCC-CCCcceEEEecCHHHHHhcCCC--ceEEEEEEEEeecC-----
Q 015474 262 DGIRPNTSVSELA----KLKPVFKKDGTTTAGNSSQ-VSDGAGAVLLMKRSVAMRKGLP--ILGVFRTFAAVGVD----- 329 (406)
Q Consensus 262 e~~r~~~t~e~l~----~~~p~~~~~g~lt~~~~~~-~~DGAaAvvL~s~~~A~~~g~~--~~a~i~g~~~~~~~----- 329 (406)
|+++|+|+++ ++|++.+| +|+++||+ .+|||+|+||+|++.|++++++ ...+|.|++.....
T Consensus 211 ---r~~~t~eevl~~~~~~rmIa~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~ 284 (498)
T PRK08257 211 ---PRERSAEEIVTPTPDNRMIAWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILE 284 (498)
T ss_pred ---CCCCCHHHHhcccCCCCeeeCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCcccccc
Confidence 3458999998 68899876 89999996 8999999999999999999853 23578888776421
Q ss_pred CCCCCCCH--HHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCC---CCCCCCCccccCCccchhHHHHHh
Q 015474 330 PAIMGVGP--AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 330 p~~~~~~~--~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~---~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
...+...+ ..+++++|++|||+++|||++|+||||++.++.++|+||||++ |+|++||++++|||+|++|+++++
T Consensus 285 r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~ 364 (498)
T PRK08257 285 RPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIA 364 (498)
T ss_pred ccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHH
Confidence 11233334 3699999999999999999999999999999999999999987 999999999999999999999998
Q ss_pred hC
Q 015474 405 CL 406 (406)
Q Consensus 405 ~l 406 (406)
|+
T Consensus 365 E~ 366 (498)
T PRK08257 365 EM 366 (498)
T ss_pred HH
Confidence 74
No 58
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-51 Score=369.97 Aligned_cols=318 Identities=23% Similarity=0.346 Sum_probs=263.6
Q ss_pred CCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 48 ~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
+.-+|||||+++|.|.+. |+..+.+..|++.+|+..||+|+++..++|+..++|.+.++.. .+..+...+|+ .
T Consensus 4 t~~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst----cgqraiyevgm-t 76 (408)
T KOG1406|consen 4 TKPRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST----CGQRAIYEVGM-T 76 (408)
T ss_pred CCceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc----cchHHHHhccc-c
Confidence 336899999999999974 7788999999999999999999999999999999999987755 34456668899 5
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCC--CC---CCChhhh------hhhhhhccCcch
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW--EG---SVNPKVK------AFEQAQNCLLPM 196 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~--~~---~~~~~~~------~~~~~~~~~~~~ 196 (406)
+.|+++||+.|++|..++.+|.+.|++|..|+||+.|+|+|++..... .. .....+. .....+-....+
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 899999999999999999999999999999999999999999854310 00 1111111 001111122356
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhc
Q 015474 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (406)
Q Consensus 197 g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~ 276 (406)
|.....+|++||..+|.+++++.++|.+...||+. .|++ .+|+|++.++
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvnnpys-qf~d------------------------------eysldqvm~s 205 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS-QFRD------------------------------EYSLDQVMKS 205 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccCChhH-hhhh------------------------------hccHHHHhcc
Confidence 77889999999999999999999999999988887 5543 4899999999
Q ss_pred CCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCce-EEEEEEEEeecCCCCC---------CC-CHHHHHHHHH
Q 015474 277 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPIL-GVFRTFAAVGVDPAIM---------GV-GPAVAIPAAV 345 (406)
Q Consensus 277 ~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~-a~i~g~~~~~~~p~~~---------~~-~~~~A~~~al 345 (406)
|-+|+ ++|.+.|||.+|||+|.||.|+.+.+++++.-. .+|++--+....|..+ |. -...+++++|
T Consensus 206 ~~v~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~ 282 (408)
T KOG1406|consen 206 PQVVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLF 282 (408)
T ss_pred hHHHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHH
Confidence 99997 699999999999999999999999999997632 2555554444444322 11 1257999999
Q ss_pred HHcCCCCCCccEEEccccchHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchhHHHHHhhC
Q 015474 346 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGNCCSNCL 406 (406)
Q Consensus 346 ~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~------------------~vN~~GG~~a~Ghp~GatG~~~v~~l 406 (406)
+++|++|.||+++|+||||+..++..+|+||||++ .|||+||+|+.|||+||||+.|-+||
T Consensus 283 aksgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcael 361 (408)
T KOG1406|consen 283 AKSGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAEL 361 (408)
T ss_pred HHcCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHH
Confidence 99999999999999999999999999999999985 69999999999999999999999886
No 59
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=8.2e-51 Score=371.35 Aligned_cols=346 Identities=37% Similarity=0.540 Sum_probs=300.5
Q ss_pred cCCCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC
Q 015474 47 VYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (406)
Q Consensus 47 ~~~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~ 126 (406)
++|++||+|...||||-- ..-.++++-+.||+.+++...|++..++.+.||.|++|++.+.-- ..+++|..++.+|++
T Consensus 39 kn~~nivlvdgvrtpfl~-sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agfs 116 (465)
T KOG1392|consen 39 KNMPNIVLVDGVRTPFLV-SGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGFS 116 (465)
T ss_pred cCCCceEEEecccCceee-cccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCCC
Confidence 467999999999999965 345679999999999999999999999999999999999998765 689999999999999
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCC-------------CChhhh------h--
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPKVK------A-- 185 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~-------------~~~~~~------~-- 185 (406)
..+|+.+|.-+|-|..+|+......|++|.+|+++++|+|-||.+|.+...+ ++..+. .
T Consensus 117 dktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nf 196 (465)
T KOG1392|consen 117 DKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNF 196 (465)
T ss_pred CCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999754321 111111 0
Q ss_pred -hhh---h--hccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeee
Q 015474 186 -FEQ---A--QNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS 259 (406)
Q Consensus 186 -~~~---~--~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~ 259 (406)
.|+ . ..+...||-.+.+++..|++||.++|+||++||..|..+++.|.|.+ ++|+.+..+++ +..
T Consensus 197 lapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~--------~t~ 267 (465)
T KOG1392|consen 197 LAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDP--------KTI 267 (465)
T ss_pred cCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCc--------cee
Confidence 011 1 12345789999999999999999999999999999999999999976 67998755443 345
Q ss_pred ccCCCCCCCchhhhhhcCCcccC-CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC-CCCCCH
Q 015474 260 VDDGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGP 337 (406)
Q Consensus 260 ~de~~r~~~t~e~l~~~~p~~~~-~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-~~~~~~ 337 (406)
+|++|| ..++|+|.++||.|-+ +|++|+.|++-+.|||.|.++|.+|.|..+|.+|.+++..+-....+|. ....+|
T Consensus 268 kdngir-vssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp 346 (465)
T KOG1392|consen 268 KDNGIR-VSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP 346 (465)
T ss_pred cCCCcc-cCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc
Confidence 899999 4999999999999975 8999999999999999999999999999999999999998888888885 456799
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCC----------------C-CCCCCCCCccccCCccchhHH
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLD----------------P-EKINVNGGALAIGHPLGTTGN 400 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~----------------~-~~vN~~GG~~a~Ghp~GatG~ 400 (406)
.++++++|++|||+.+|||.||+||+|+.|.+.-++++.-+ + +++|.+||.+++|||+||||+
T Consensus 347 ay~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgv 426 (465)
T KOG1392|consen 347 AYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGV 426 (465)
T ss_pred ccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccch
Confidence 99999999999999999999999999999988665555422 1 489999999999999999999
Q ss_pred HHHh
Q 015474 401 CCSN 404 (406)
Q Consensus 401 ~~v~ 404 (406)
|...
T Consensus 427 rl~m 430 (465)
T KOG1392|consen 427 RLAM 430 (465)
T ss_pred hhHH
Confidence 8764
No 60
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.94 E-value=4.4e-26 Score=230.22 Aligned_cols=239 Identities=22% Similarity=0.302 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCe----EEEEeecCCCC-------------------------CCccHHHHHHHHcCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~----v~~g~~~~~~~-------------------------~~~~~a~~va~~lGl 125 (406)
..+|+.+++++||+|+|++++++|. +++|+..+... .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4789999999999999999999987 56654322100 001234568889999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
..|.++++++|+||+.||..|++.|++|++|++||+|+|++.. |. ...+....+
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~--------------------~~~~~~~~~--- 204 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PL--------------------GIAGFAAMK--- 204 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HH--------------------HHHHHHHhC---
Confidence 6899999999999999999999999999999999999998665 10 000000000
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
.+... ..++ . ...+| |+.
T Consensus 205 ---------------------------~ls~~-------~~~~------------~------------~~~~p-fd~--- 222 (407)
T TIGR03150 205 ---------------------------ALSTR-------NDDP------------E------------KASRP-FDK--- 222 (407)
T ss_pred ---------------------------cccCC-------CCCC------------C------------cCCCC-CcC---
Confidence 11000 0000 0 01223 322
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~ 360 (406)
..++..++|||+++||++++.|+++|.+++++|.+++.... .|...+.+...+++++|+++|++++|||++|+
T Consensus 223 --~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~ 300 (407)
T TIGR03150 223 --DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINA 300 (407)
T ss_pred --CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 12455589999999999999999999999999999987642 23334455778999999999999999999999
Q ss_pred cccch----HHHHHHH-HHcCCC--CCCCCCCCCccccCCccchhHHHHHhh
Q 015474 361 NEAFA----SQFVYCR-NKLGLD--PEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 361 hd~fa----~~~l~~~-e~lGl~--~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
|++++ ..++..+ +.+|-. +.+||..++. +|||+||+|+.++++
T Consensus 301 h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~--~Gh~~~AsG~~~~~~ 350 (407)
T TIGR03150 301 HGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSM--TGHLLGAAGAIEAIF 350 (407)
T ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcch--hchhHHHHHHHHHHH
Confidence 99999 4555444 446654 3456666665 599999999999875
No 61
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.94 E-value=2e-25 Score=225.86 Aligned_cols=242 Identities=21% Similarity=0.314 Sum_probs=173.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCC-------------------------CCCccHHHHHHHHcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~-------------------------~~~~~~a~~va~~lG 124 (406)
...+|+.+++++||+|||++++++| ++++|+..+.. ......+..++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3568899999999999999999998 46666543210 001124567889999
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+ ..|.++++.+|+|++.||..|+++|++|++|++||+|+|.++. |. ...++.+.+
T Consensus 151 l--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~--------------------~~~~~~~~~-- 205 (411)
T PRK07314 151 A--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PL--------------------GIAGFAAAR-- 205 (411)
T ss_pred C--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HH--------------------HHHHHHHhc--
Confidence 9 6799999999999999999999999999999999999997664 10 000000000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
.+.. +..+| +. ..+| |+.
T Consensus 206 ----------------------------~ls~-------~~~~p------------~~------------~~~p-fd~-- 223 (411)
T PRK07314 206 ----------------------------ALST-------RNDDP------------ER------------ASRP-FDK-- 223 (411)
T ss_pred ----------------------------cccC-------CCCCC------------Cc------------CcCC-CcC--
Confidence 0000 00000 00 1122 332
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEee-----cCCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e 359 (406)
..|++.++|||+++||++++.|++++.+++++|+|++... ..|...+.++..+++++|+++|++++|||++|
T Consensus 224 ---~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~ 300 (411)
T PRK07314 224 ---DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYIN 300 (411)
T ss_pred ---CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 1366779999999999999999999999999999998865 24554556678899999999999999999999
Q ss_pred ccccchH----HHH-HHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhh
Q 015474 360 INEAFAS----QFV-YCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 360 ~hd~fa~----~~l-~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
.|+.++. .+. .+.+.+|....++++++.+..+|||+||+|+.+++.
T Consensus 301 ~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~ 351 (411)
T PRK07314 301 AHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIF 351 (411)
T ss_pred ccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHH
Confidence 9988872 222 223345544455666666666899999999988763
No 62
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.93 E-value=1.9e-25 Score=210.92 Aligned_cols=206 Identities=26% Similarity=0.348 Sum_probs=180.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
+..+|+.+|++++|+++|+++++||.+++++..++.. ....+..++..+|++ +.+.++++.+|+|++.||..|.+.|+
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887653 467788999999996 78999999999999999999999999
Q ss_pred cCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 015474 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~ 233 (406)
+|++|.+|++|+|. .
T Consensus 84 ~g~~~~~lv~~~e~--~--------------------------------------------------------------- 98 (254)
T cd00327 84 NGKADIVLAGGSEE--F--------------------------------------------------------------- 98 (254)
T ss_pred CCCCCEEEEEecce--e---------------------------------------------------------------
Confidence 99999999999774 0
Q ss_pred CccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcC
Q 015474 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (406)
Q Consensus 234 ~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 313 (406)
.++|||+|+||++++.+++++
T Consensus 99 -----------------------------------------------------------~~gdGAaa~vL~~~~~a~~~~ 119 (254)
T cd00327 99 -----------------------------------------------------------VFGDGAAAAVVESEEHALRRG 119 (254)
T ss_pred -----------------------------------------------------------eecceEEEEEECcHHHHHHCC
Confidence 056999999999999999999
Q ss_pred CCceEEEEEEEEeecCCC----CCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCC---CCCC
Q 015474 314 LPILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKI---NVNG 386 (406)
Q Consensus 314 ~~~~a~i~g~~~~~~~p~----~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~v---N~~G 386 (406)
.+++.+++++......+. .......++++++|+++|++++|||+|++|++++.......+.+++++++. |+.+
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (254)
T cd00327 120 AHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSA 199 (254)
T ss_pred CceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceec
Confidence 999999999876544332 223355789999999999999999999999999999888889999887554 7899
Q ss_pred CccccCCccchhHHHHHhh
Q 015474 387 GALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 387 G~~a~Ghp~GatG~~~v~~ 405 (406)
+...+||+.+|+|..++.+
T Consensus 200 ~~~~~G~~~~as~~~~l~~ 218 (254)
T cd00327 200 TLIMTGHPLGAAGLAILDE 218 (254)
T ss_pred cccccccchHHHHHHHHHH
Confidence 9999999999999988865
No 63
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.93 E-value=7.4e-25 Score=222.58 Aligned_cols=241 Identities=19% Similarity=0.299 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCC-C----eEEEEeecCCCC-----------C--------------CccHHHHHHHHcC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAG 124 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~I-D----~v~~g~~~~~~~-----------~--------------~~~~a~~va~~lG 124 (406)
...|+..++++||+|+|++++++ + ++++|+..+... . ....+..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 46788999999999999988777 4 467766533210 0 0123556888999
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+ ..|.++++++|+||+.||..|++.|++|++|++||+|+|.+.. +. . ..+.
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~----------~----------~~~f------ 212 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RV----------S----------LAGF------ 212 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH----------H----------HHHH------
Confidence 9 6899999999999999999999999999999999999998654 10 0 0000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
.. .+.+.... . .++++ ..|| |+.+
T Consensus 213 ------------------~~------~~~l~~~~------~------------~~p~~------------~~~P-fd~~- 236 (424)
T PRK06333 213 ------------------AA------ARALSTRF------N------------DAPEQ------------ASRP-FDRD- 236 (424)
T ss_pred ------------------HH------cccccccC------C------------CCCCc------------CCCC-CCCC-
Confidence 00 00110000 0 00011 2333 4331
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e 359 (406)
.+...++|||+++||++++.|+++|.+++++|.|++.+.. .|...+.+...+++++|+++||+++|||++|
T Consensus 237 ----~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~ 312 (424)
T PRK06333 237 ----RDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLN 312 (424)
T ss_pred ----CCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence 1233389999999999999999999999999999988643 2333344567899999999999999999999
Q ss_pred ccccchH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchhHHHHHhh
Q 015474 360 INEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 360 ~hd~fa~----~~l~~~e~-lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
.|++++. .++..++. +| ...++++++++..+||++||+|+.+++.
T Consensus 313 ~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~ 362 (424)
T PRK06333 313 AHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIF 362 (424)
T ss_pred ccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHH
Confidence 9999987 56555544 56 3457899999999999999999998864
No 64
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.93 E-value=1.7e-24 Score=219.46 Aligned_cols=245 Identities=20% Similarity=0.306 Sum_probs=173.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCC-CCCCCeEEEEeecCCCCCC-----------------------------ccHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVD-PSEVGDIVVGTVLAPGSQR-----------------------------ASECRMAA 120 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~-~~~ID~v~~g~~~~~~~~~-----------------------------~~~a~~va 120 (406)
++....+|+..++++||+|+|++ +++++...+|.+.+....+ ...+..++
T Consensus 73 ~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 152 (421)
T PTZ00050 73 RESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVA 152 (421)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHH
Confidence 44566899999999999999998 7777764444444332100 12345678
Q ss_pred HHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHH
Q 015474 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTS 200 (406)
Q Consensus 121 ~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a 200 (406)
..+|+ ..|.++++++|+||+.||..|++.|++|++|++||+|+|.+.. |.. ..+.
T Consensus 153 ~~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~--------------------~~~f-- 207 (421)
T PTZ00050 153 IKHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVS--------------------FAGF-- 207 (421)
T ss_pred HHhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHH--------------------HHHH--
Confidence 88899 6899999999999999999999999999999999999998553 100 0000
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcc
Q 015474 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280 (406)
Q Consensus 201 ~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~ 280 (406)
.+. +.+.... ..+++. ..+| |
T Consensus 208 ----------------------~~~------~~l~~~~------------------~~~p~~------------~~~p-f 228 (421)
T PTZ00050 208 ----------------------SRM------RALCTKY------------------NDDPQR------------ASRP-F 228 (421)
T ss_pred ----------------------Hhh------hccccCc------------------CCCCCc------------cCCC-C
Confidence 000 0000000 000001 1223 4
Q ss_pred cCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHH-cCCCCCC
Q 015474 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS-AGLQLDD 354 (406)
Q Consensus 281 ~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~-AGl~~~D 354 (406)
+++ .+...++|||+++||++++.|+++|.+++++|+|++.+.. .|...+.++..+++++|++ ||++++|
T Consensus 229 d~~-----~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~d 303 (421)
T PTZ00050 229 DKD-----RAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININD 303 (421)
T ss_pred cCC-----CCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhh
Confidence 331 1222479999999999999999999999999999988754 3445566778999999999 9999999
Q ss_pred ccEEEccccchH----HH-HHHHHHcCCCC-CCCCCCCCccccCCccchhHHHHHh
Q 015474 355 IDLFEINEAFAS----QF-VYCRNKLGLDP-EKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 355 ID~~e~hd~fa~----~~-l~~~e~lGl~~-~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
||++|+|++++. .+ ....+.+|-.. .++.++.-+..+||++||+|+..++
T Consensus 304 Id~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~ 359 (421)
T PTZ00050 304 VDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESI 359 (421)
T ss_pred CCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHH
Confidence 999999999982 23 23344455432 4566666666799999999998875
No 65
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=99.92 E-value=1.1e-25 Score=187.91 Aligned_cols=93 Identities=53% Similarity=0.786 Sum_probs=80.3
Q ss_pred CCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCC
Q 015474 314 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393 (406)
Q Consensus 314 ~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Gh 393 (406)
++|+++|++++..+.+|..++.+|..|++++|+++|++++|||+||+||+|+++++.++|+||++++|||++||+|++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhC
Q 015474 394 PLGTTGNCCSNCL 406 (406)
Q Consensus 394 p~GatG~~~v~~l 406 (406)
|+||||+|++++|
T Consensus 81 P~gasG~r~~~~l 93 (123)
T PF02803_consen 81 PLGASGARLVVEL 93 (123)
T ss_dssp HTTTHHHHHHHHH
T ss_pred cccccccchhhhh
Confidence 9999999999874
No 66
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.91 E-value=2.4e-23 Score=204.65 Aligned_cols=239 Identities=15% Similarity=0.245 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCCCeEEEEeecCCCC-----------CC--------------ccHHHHHHHHcCCCC
Q 015474 75 PDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPE 127 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~--~~~ID~v~~g~~~~~~~-----------~~--------------~~~a~~va~~lGl~~ 127 (406)
..+++..++++||++||+. ++.+ ++++|+..+... ++ ...+..++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4678889999999999974 3333 577776544421 00 1246678889999
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
++|.+++.++|+||+.||..|++.|++|++|++||+|+|.... |. ...+...-
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~--------------------~~~~f~~~------ 133 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TV--------------------SLAGFAAA------ 133 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HH--------------------HHHHHHHh------
Confidence 6899999999999999999999999999999999999997544 00 00000000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcc
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 287 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt 287 (406)
++.. . .+. .++++ ..|| ||.+
T Consensus 134 ----------------~~ls---~-~~~----------------------~~p~~------------~~rP-Fd~~---- 154 (342)
T PRK14691 134 ----------------RALS---T-HFN----------------------STPEK------------ASRP-FDTA---- 154 (342)
T ss_pred ----------------hhhh---c-CCC----------------------CCCCc------------CCCC-CCCC----
Confidence 0000 0 000 00111 1234 5542
Q ss_pred cCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 288 ~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
.+...++|||+++||++++.|+++|.+|+++|++++..+.. |...+.++..+++++|+++||+++|||++|.|+
T Consensus 155 -r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHg 233 (342)
T PRK14691 155 -RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHA 233 (342)
T ss_pred -CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 13333899999999999999999999999999999987654 444566778999999999999999999999999
Q ss_pred cchHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 363 AFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 363 ~fa~~----~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
+++.. |...+ +.+|-. .++.++.=+-.+||++||+|+..++
T Consensus 234 tgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~ 279 (342)
T PRK14691 234 TSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETI 279 (342)
T ss_pred CCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHH
Confidence 99963 44444 345632 2233333333589999999987664
No 67
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.91 E-value=4.7e-24 Score=201.18 Aligned_cols=234 Identities=24% Similarity=0.387 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCC---CCC----eEEEEeecCCCCC-----------C--------------ccHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGSQ-----------R--------------ASECRMAAFY 122 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~---~ID----~v~~g~~~~~~~~-----------~--------------~~~a~~va~~ 122 (406)
+..|++.|.++||+|+++.+. +.| +|.+|+..++... + .+.+.+++..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 467899999999999998654 334 3566654443210 0 1235678899
Q ss_pred cCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHH
Q 015474 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (406)
Q Consensus 123 lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (406)
+|+ ..|.+++.++|++|..+|..+++.|+.|++|++|++|.|+--. |+++.
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~------------------------Plsla--- 224 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN------------------------PLSLA--- 224 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec------------------------chhhh---
Confidence 999 6899999999999999999999999999999999999997433 22111
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
| .++.+|.. .++.+|+ ..+|| ||+
T Consensus 225 -----G-----------F~r~RALS---------------t~nd~P~------------------------~aSRP-fD~ 248 (440)
T KOG1394|consen 225 -----G-----------FSRARALS---------------TRNDNPQ------------------------KASRP-FDK 248 (440)
T ss_pred -----h-----------HHHHHHhh---------------hcCCCcc------------------------ccCCC-Ccc
Confidence 0 11112211 0011121 03556 665
Q ss_pred --CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEee-----cCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 015474 283 --DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDI 355 (406)
Q Consensus 283 --~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl~~~DI 355 (406)
||++ +++|++.+||++.|+|+++|.+|+++++|++.++ ++|+..|.|...+++++|++|||.|+||
T Consensus 249 ~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i 321 (440)
T KOG1394|consen 249 KRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDI 321 (440)
T ss_pred CCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhc
Confidence 5776 8999999999999999999999999999999876 4688889999999999999999999999
Q ss_pred cEEEccccchHH----HH-HHHHHcCCCCC--CCCCCCCccccCCccchhHHHH
Q 015474 356 DLFEINEAFASQ----FV-YCRNKLGLDPE--KINVNGGALAIGHPLGTTGNCC 402 (406)
Q Consensus 356 D~~e~hd~fa~~----~l-~~~e~lGl~~~--~vN~~GG~~a~Ghp~GatG~~~ 402 (406)
||++.|-..+.. +. .....|+-... +||.+-|. +||-+||+|+..
T Consensus 322 ~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKga--iGHLLGAAGavE 373 (440)
T KOG1394|consen 322 DYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGA--IGHLLGAAGAVE 373 (440)
T ss_pred CeeecccccCcCchHHHHHHHHHHhccCCcccccccccch--hhhhcccccchh
Confidence 999999777642 22 22233443222 57777775 799999999764
No 68
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.90 E-value=1.4e-22 Score=202.13 Aligned_cols=230 Identities=21% Similarity=0.309 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCC-CCeEEEEeecCCCC----------------------------CCccHHHHHHHHcCCC
Q 015474 76 DDLLAPVLKAVIEKTNVDPSE-VGDIVVGTVLAPGS----------------------------QRASECRMAAFYAGFP 126 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~-ID~v~~g~~~~~~~----------------------------~~~~~a~~va~~lGl~ 126 (406)
..++..++++||+|+|+++.. -=++++|+..+... .....+..++..+|+
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~- 135 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT- 135 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC-
Confidence 346778899999999997522 11577777543210 001235678889999
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHH
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (406)
+.|.+++.++|+||+.||..|++.|++|++|++||+|+|.... | +.+
T Consensus 136 -~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~-----------------------~~~-------- 182 (381)
T PRK05952 136 -QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-P-----------------------LTL-------- 182 (381)
T ss_pred -CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-H-----------------------HHH--------
Confidence 6899999999999999999999999999999999999996332 0 000
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCc
Q 015474 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (406)
Q Consensus 207 ~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~l 286 (406)
..+.. .+.+ +.+ ..|| |+.+
T Consensus 183 -------------~~~~~------~~~l------------------------s~~-------------~~rP-fd~~--- 202 (381)
T PRK05952 183 -------------AGFQQ------MGAL------------------------AKT-------------GAYP-FDRQ--- 202 (381)
T ss_pred -------------HHHHh------cCCc------------------------CCC-------------CCCC-CCCC---
Confidence 00000 0001 000 1234 4431
Q ss_pred ccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 287 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
.+...++||++++||++++.|++++.+|+++|.|++.... .|...+.+...+++++|+++||+++|||++|.|
T Consensus 203 --r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~h 280 (381)
T PRK05952 203 --REGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAH 280 (381)
T ss_pred --CCCccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEcc
Confidence 1333489999999999999999999999999999988643 233344456789999999999999999999988
Q ss_pred ccchH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 362 EAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 362 d~fa~----~~l~~~e~-lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
...+. .+...++. +| .++++++.+..+||++||+|+.+++
T Consensus 281 gtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~ 325 (381)
T PRK05952 281 GTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVA 325 (381)
T ss_pred CCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHH
Confidence 66553 33333333 34 3567777777899999999998875
No 69
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.90 E-value=3.4e-23 Score=203.22 Aligned_cols=246 Identities=20% Similarity=0.130 Sum_probs=180.1
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC----CCCCCeEEEEeecCCCC----------------
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD----PSEVGDIVVGTVLAPGS---------------- 110 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~----~~~ID~v~~g~~~~~~~---------------- 110 (406)
+++|+|++.+ ..+|+.+|++++|+++|++ +++||.|++++..+...
T Consensus 1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (332)
T cd00825 1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV 66 (332)
T ss_pred CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence 4689999988 5889999999999999999 99999999988765431
Q ss_pred ----CCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhh
Q 015474 111 ----QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAF 186 (406)
Q Consensus 111 ----~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~ 186 (406)
..+..+..++..+|+ +.|.++++.+|+|++.+|..|.+.|++|++|.+|++|+|.++.... .
T Consensus 67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~------------~ 132 (332)
T cd00825 67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD------------C 132 (332)
T ss_pred hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHH------------H
Confidence 013346789999999 6789999999999999999999999999999999999998765100 0
Q ss_pred hhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCC
Q 015474 187 EQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRP 266 (406)
Q Consensus 187 ~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~ 266 (406)
.+. ...+ . .++++.
T Consensus 133 --------~~~-------~~~~------------------------~------------------------~~~~~~--- 146 (332)
T cd00825 133 --------EFD-------AMGA------------------------L------------------------STPEKA--- 146 (332)
T ss_pred --------HHH-------hhcc------------------------c------------------------cCCCCC---
Confidence 000 0000 0 000000
Q ss_pred CCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC-----CCCCHHHHH
Q 015474 267 NTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAI 341 (406)
Q Consensus 267 ~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~A~ 341 (406)
.+| |+ ...+++.++|||+|+||++++.+++++.++++++.+++........ .......++
T Consensus 147 ---------~~~-~~-----~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (332)
T cd00825 147 ---------SRT-FD-----AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAA 211 (332)
T ss_pred ---------CCC-CC-----CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHH
Confidence 111 21 1246777999999999999999999999998899888764322111 112446799
Q ss_pred HHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCC---CCCCCCCccccCCccchhHHHHHhh
Q 015474 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 342 ~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~---~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+++|+++|++++|||+++.|..+........+.+++... +++...-+..+||+.+|+|..++++
T Consensus 212 ~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 212 KEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred HHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 999999999999999999999887543333333333222 3455555567999999999988864
No 70
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.90 E-value=1.9e-22 Score=205.42 Aligned_cols=240 Identities=19% Similarity=0.274 Sum_probs=168.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCC-----CCCeEEEEeecCCCCC-------------------------CccHHHHHHHHc
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPS-----EVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYA 123 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~-----~ID~v~~g~~~~~~~~-------------------------~~~~a~~va~~l 123 (406)
...+|+..++++||+|||+++. +..++++|+..+.... ....+..++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3567899999999999998642 3557888875433210 012355788999
Q ss_pred CCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHH-H
Q 015474 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE-N 202 (406)
Q Consensus 124 Gl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~-~ 202 (406)
|+ ..|.++|+++|+||+.||..|++.|++|++|++||+|+|.+.. +. ...+.... .
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~--------------------~~~~~~~~~~ 228 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-AL--------------------SIAGFSRSRA 228 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HH--------------------HHHHHHHhhh
Confidence 99 6899999999999999999999999999999999999997543 00 00000000 0
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC
Q 015474 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (406)
Q Consensus 203 ~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~ 282 (406)
+..+++. ++++ ..+| |+.
T Consensus 229 l~~~~~~-------------------------------------------------~p~~------------~~~p-fd~ 246 (437)
T PLN02836 229 LSTKFNS-------------------------------------------------CPTE------------ASRP-FDC 246 (437)
T ss_pred hhcccCC-------------------------------------------------Cccc------------ccCC-ccc
Confidence 0000000 0000 1223 322
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~ 357 (406)
..++..++|||+++||++++.|+++|.+++++|.|++..+. .|...+.+...++++||++|||+++|||+
T Consensus 247 -----~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ 321 (437)
T PLN02836 247 -----DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDY 321 (437)
T ss_pred -----CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCE
Confidence 13556689999999999999999999999999999988653 23222334567999999999999999999
Q ss_pred EEccccchHH----HHHHH-HHcCCC----CCCCCCCCCccccCCccchhHHHHHhh
Q 015474 358 FEINEAFASQ----FVYCR-NKLGLD----PEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 358 ~e~hd~fa~~----~l~~~-e~lGl~----~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+|.|++++.. +...+ +.+|-. ..+|+..+|. +||++||+|+.+++.
T Consensus 322 ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~--~GH~~~AsG~~~li~ 376 (437)
T PLN02836 322 VNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGA--TGHLLGAAGAVEAIF 376 (437)
T ss_pred EEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCccc--ccccHHHHHHHHHHH
Confidence 9999999842 33222 334421 2467777775 599999999987653
No 71
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=2.2e-22 Score=203.37 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCC-----------C--------------CccHHHHHHHHcCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGF 125 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~-----------~--------------~~~~a~~va~~lGl 125 (406)
...++..++++||+|+|+++.+.+ ++++|+..+... . ...++..++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 346888899999999999765544 477777543211 0 01356788899999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
..|.++++++|+|++.||..|++.|++|++|++||+|+|.... |. . ..+.
T Consensus 154 --~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~----------~----------~~~f------- 203 (414)
T PRK08722 154 --RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PL----------G----------MAGF------- 203 (414)
T ss_pred --CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HH----------H----------HHHH-------
Confidence 6899999999999999999999999999999999999997654 00 0 0000
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
.. .+.+.. +. -++++ ..|| |+.+
T Consensus 204 -----------------~~------~~~ls~-------~~------------~~p~~------------~~rp-fd~~-- 226 (414)
T PRK08722 204 -----------------GA------AKALST-------RN------------DEPQK------------ASRP-WDKD-- 226 (414)
T ss_pred -----------------HH------cCCccc-------CC------------CCCcc------------ccCc-CcCC--
Confidence 00 000000 00 00111 2334 5431
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~ 360 (406)
.+...++||++++||++++.|+++|.+++++|.+++..+. .|...+.+...+++++|+++||+++|||++|.
T Consensus 227 ---~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~ 303 (414)
T PRK08722 227 ---RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNA 303 (414)
T ss_pred ---CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEc
Confidence 2333489999999999999999999999999999988653 34333445578999999999999999999999
Q ss_pred cccchH----HHHHHH-HHcCCC-CCCCCCCCCccccCCccchhHHHHHh
Q 015474 361 NEAFAS----QFVYCR-NKLGLD-PEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 361 hd~fa~----~~l~~~-e~lGl~-~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|++++. .|...+ +.+|-. ..++.++.=+-.+||.+||+|+.+++
T Consensus 304 hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~ 353 (414)
T PRK08722 304 HGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAI 353 (414)
T ss_pred cCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHH
Confidence 999885 344433 345532 22333322223489999999998874
No 72
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=7.4e-22 Score=196.89 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=175.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-CCCCC---eEEEEeecCCCC----C----------------------CccHHHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTNVD-PSEVG---DIVVGTVLAPGS----Q----------------------RASECRMAAF 121 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAgl~-~~~ID---~v~~g~~~~~~~----~----------------------~~~~a~~va~ 121 (406)
-.....|+..|+.+||+|+|++ ..+.+ ++++|+..++.. + ....+..++.
T Consensus 68 ~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~ 147 (412)
T COG0304 68 MDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAI 147 (412)
T ss_pred ccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHH
Confidence 3467889999999999999997 34454 345555444322 0 0123667889
Q ss_pred HcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHH
Q 015474 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (406)
Q Consensus 122 ~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (406)
.+|+ ..+.+++..+|+||.+||..|++.|+.|++|++|++|+|..-. ++++
T Consensus 148 ~~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~------------------------~~~i--- 198 (412)
T COG0304 148 VFGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAIT------------------------PLGI--- 198 (412)
T ss_pred HhCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccC------------------------HHHH---
Confidence 9999 6899999999999999999999999999999999999987332 0000
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCccc
Q 015474 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (406)
Q Consensus 202 ~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~ 281 (406)
.-|... +|....+ .+|+ + .+|| |+
T Consensus 199 -------------~gF~am---~Alst~n---------------d~p~----------------~--------asrP-fd 222 (412)
T COG0304 199 -------------AGFEAM---RALSTRN---------------DDPE----------------K--------ASRP-FD 222 (412)
T ss_pred -------------HHHHHH---HHhccCC---------------CCcc----------------c--------cCCC-CC
Confidence 001000 0000000 0111 0 2445 55
Q ss_pred C--CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEee-----cCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 015474 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (406)
Q Consensus 282 ~--~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl~~~D 354 (406)
+ +|++ +++||+++||++.|.|+++|.+++++|+|++... +.|...+.+...+++.||+++||+++|
T Consensus 223 ~~RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~ 295 (412)
T COG0304 223 KNRDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPED 295 (412)
T ss_pred CCCCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhH
Confidence 4 5666 8999999999999999999999999999999865 457777889999999999999999999
Q ss_pred ccEEEccccch----HHHHHHHHH-cCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 355 IDLFEINEAFA----SQFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 355 ID~~e~hd~fa----~~~l~~~e~-lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|||++.|...+ ..+...++. +|=...++-++.-+-.+||++||+|+.+.+
T Consensus 296 idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai 350 (412)
T COG0304 296 IDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAI 350 (412)
T ss_pred CCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHH
Confidence 99999997666 345555554 454444444555566699999999988764
No 73
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.89 E-value=3.5e-22 Score=201.66 Aligned_cols=242 Identities=23% Similarity=0.340 Sum_probs=170.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCe----EEEEeecCCCC-------------------------CCccHHHHHHHHcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~----v~~g~~~~~~~-------------------------~~~~~a~~va~~lG 124 (406)
...+|+.+++++||+|+|++++++|. +++|+..+... .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 56789999999999999999988875 56665433210 01235678999999
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+ ..+.++++.+|+|+++||..|+++|++|++|.+||+|+|.++. | +....
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p-----------------------~~~~~---- 199 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-P-----------------------LTLAG---- 199 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-H-----------------------HHHHH----
Confidence 9 5789999999999999999999999999999999999998764 1 00000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
+.. .+.+... ..+++. ..+| |+.+
T Consensus 200 -----------------~~~------~~~l~~~-------------------~~~p~~------------~~~p-f~~~- 223 (406)
T cd00834 200 -----------------FAA------LRALSTR-------------------NDDPEK------------ASRP-FDKD- 223 (406)
T ss_pred -----------------HHh------cCCcCCC-------------------CCCCcc------------CCCC-CCCC-
Confidence 000 0011000 000000 1122 3221
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e 359 (406)
.++..++|||+++||++.+.|++++.+++++|.+++.... .|...+.+...+++++|+++|++++|||+++
T Consensus 224 ----~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~ 299 (406)
T cd00834 224 ----RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYIN 299 (406)
T ss_pred ----CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence 2445589999999999999999999999999999887542 2333345667899999999999999999999
Q ss_pred ccccchH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHhh
Q 015474 360 INEAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 360 ~hd~fa~----~~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
.|...+. .+...+ +.++-.+++++.+..+..+||+++|+|+.+++.
T Consensus 300 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~ 350 (406)
T cd00834 300 AHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIA 350 (406)
T ss_pred cccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHH
Confidence 9988764 233333 334443345555555555799999999998864
No 74
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.89 E-value=1.2e-22 Score=206.40 Aligned_cols=235 Identities=24% Similarity=0.318 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCC------------------CCccHHHHHHHHcCCCCCCceE
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVR 132 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~------------------~~~~~a~~va~~lGl~~~~~~~ 132 (406)
...|+.+++++||+|||+++++|| .+++|+...+.. .....+..++..+|+ ..|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 356899999999999999999999 788886543211 012345678899999 56899
Q ss_pred EEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHH
Q 015474 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (406)
Q Consensus 133 ~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre 212 (406)
+++.+|+|++.||..|+++|++|++|++||+|+|.+..... ..+.
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~---------------------~~~~-------------- 209 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT---------------------FVGF-------------- 209 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH---------------------HHHH--------------
Confidence 99999999999999999999999999999999998654100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCC
Q 015474 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (406)
Q Consensus 213 ~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~ 292 (406)
.. .+++ ..++. .+| |+. ..++.
T Consensus 210 ----------~~------~~~l------------------------~~~~~------------~~p-f~~-----~~~g~ 231 (424)
T smart00825 210 ----------SR------AGML------------------------SPDGR------------CKT-FDA-----DADGY 231 (424)
T ss_pred ----------hh------cCCC------------------------CCCCC------------CCC-CCC-----CCCcc
Confidence 00 0011 00111 122 322 12455
Q ss_pred CCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC-----CCCCHHHHHHHHHHHcCCCCCCccEEEccccchH-
Q 015474 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS- 366 (406)
Q Consensus 293 ~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~- 366 (406)
.++|||+++||++++.|++++.+++++|.+++........ .+.+...+++++|+++||+++|||+++.|++++.
T Consensus 232 ~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~ 311 (424)
T smart00825 232 VRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPL 311 (424)
T ss_pred cccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCC
Confidence 6899999999999999999999999999999876432211 1223457999999999999999999999977654
Q ss_pred ---HHH-HHHHHcCCCC---CCCCCCCCccc-cCCccchhHHHHHhh
Q 015474 367 ---QFV-YCRNKLGLDP---EKINVNGGALA-IGHPLGTTGNCCSNC 405 (406)
Q Consensus 367 ---~~l-~~~e~lGl~~---~~vN~~GG~~a-~Ghp~GatG~~~v~~ 405 (406)
.+. ...+.+|... .++.+ ++.++ +||++||+|+.++++
T Consensus 312 ~d~~E~~al~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~l~~ 357 (424)
T smart00825 312 GDPIEAEALAAVFGQGRPRDGPLLL-GSVKSNIGHLEAAAGVAGLIK 357 (424)
T ss_pred CCHHHHHHHHHHHhccCCCCCceEE-eccccccCCcccchhHHHHHH
Confidence 222 2234455432 23333 45554 699999999998864
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.89 E-value=7.1e-22 Score=199.71 Aligned_cols=242 Identities=19% Similarity=0.171 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCC--eEEEEeecCC-------------CC-----------CCccHHHHHHHHcCCCC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAP-------------GS-----------QRASECRMAAFYAGFPE 127 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID--~v~~g~~~~~-------------~~-----------~~~~~a~~va~~lGl~~ 127 (406)
...+|+..++++||+|+|+++.+.+ ++++|+.... .. .....+..++..+|+
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI-- 156 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--
Confidence 3577999999999999999643333 3455533210 00 001245678899999
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
..|.+++.++|+|++.||..|++.|++|++|++||+|++.... +. . ..++.. .
T Consensus 157 ~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~--------~------------~~~~~~------~ 209 (410)
T PRK07103 157 RGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YW--------E------------CQALRS------L 209 (410)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HH--------H------------HHHHHH------c
Confidence 5789999999999999999999999999999999999874322 00 0 000000 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcc
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 287 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt 287 (406)
+ .+... ....+| +. ..|| |+.
T Consensus 210 ~------------------------~l~~~-----~~~~~p------------~~------------~~rP-fd~----- 230 (410)
T PRK07103 210 G------------------------AMGSD-----RFADEP------------EA------------ACRP-FDQ----- 230 (410)
T ss_pred c------------------------ccccC-----ccCCCc------------cc------------CcCC-CCC-----
Confidence 0 00000 000000 01 1233 443
Q ss_pred cCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEccccc
Q 015474 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (406)
Q Consensus 288 ~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~f 364 (406)
..++..++|||+++||++++.|+++|.+++++|.|++.....-. ....+...+++++|+++|++++|||+++.|.++
T Consensus 231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtg 310 (410)
T PRK07103 231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTG 310 (410)
T ss_pred CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCC
Confidence 24566699999999999999999999999999999988643211 122344689999999999999999999999999
Q ss_pred hH----HHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHhh
Q 015474 365 AS----QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 365 a~----~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+. .+...+...+..+.+|+..++.+ ||++||+|+.+++.
T Consensus 311 t~~~D~~E~~al~~~~~~~~~v~s~k~~~--Gh~~~AsG~~~l~~ 353 (410)
T PRK07103 311 SPLGDETELAALFASGLAHAWINATKSLT--GHGLSAAGIVELIA 353 (410)
T ss_pred CCCCCHHHHHHHhcCCCCCCeEECCCccc--ccCchhhhHHHHHH
Confidence 86 44544543444456788888875 99999999998864
No 76
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.88 E-value=3.2e-21 Score=199.31 Aligned_cols=234 Identities=19% Similarity=0.299 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHcCCCCC---CCC----eEEEEeecCCCC------------------------CCccHHHHHHHHcCC
Q 015474 77 DLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGS------------------------QRASECRMAAFYAGF 125 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~---~ID----~v~~g~~~~~~~------------------------~~~~~a~~va~~lGl 125 (406)
.++..++++||+|+|++++ +++ +|++|+..+... .....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 5678899999999999764 232 578887643210 001234567888999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
..|.++++++|+|++.||..|++.|++|++|++||+|+|.... |.. ..+...-+
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~--------------------~~~f~~~~--- 334 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIG--------------------LGGFVACR--- 334 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHH--------------------HHHHHHHH---
Confidence 6899999999999999999999999999999999999997433 100 00000000
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC--C
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~--~ 283 (406)
..+. ++ .+ +++ ..|| ||. +
T Consensus 335 -------------aLS~----~~-----------------~~------------p~~------------~~rP-FD~~rd 355 (540)
T PLN02787 335 -------------ALSQ----RN-----------------DD------------PTK------------ASRP-WDMNRD 355 (540)
T ss_pred -------------Hhhc----cC-----------------CC------------ccc------------ccCC-cccCCC
Confidence 0000 00 00 011 2344 554 4
Q ss_pred CCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 015474 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (406)
Q Consensus 284 g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~ 358 (406)
|++ ++|||+++||++.+.|+++|.+|+++|+|++.+.. .|+..+.+...++++||+++||+++|||++
T Consensus 356 Gfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyI 428 (540)
T PLN02787 356 GFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI 428 (540)
T ss_pred Ccc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 544 89999999999999999999999999999988643 344444566789999999999999999999
Q ss_pred EccccchH----HHHHHH-HHcCCC-CCCCCCCCCccccCCccchhHHHHHh
Q 015474 359 EINEAFAS----QFVYCR-NKLGLD-PEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 359 e~hd~fa~----~~l~~~-e~lGl~-~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
+.|..-+. .|...+ +.+|-. +.+|+..-+ .+||++||+|+.+++
T Consensus 429 naHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks--~iGH~~gAAGa~eli 478 (540)
T PLN02787 429 NAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKS--MIGHLLGAAGAVEAI 478 (540)
T ss_pred EccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCC--CcCCCcccchHHHHH
Confidence 99977653 344333 345632 235654444 389999999998775
No 77
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.87 E-value=3.4e-21 Score=194.73 Aligned_cols=239 Identities=21% Similarity=0.281 Sum_probs=168.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-CC----eEEEEeecCCCC---------------------CC--ccHHHHHHHHcCC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAPGS---------------------QR--ASECRMAAFYAGF 125 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~-ID----~v~~g~~~~~~~---------------------~~--~~~a~~va~~lGl 125 (406)
....|+.+++++||+|||+++++ ++ ++++|+..+... .. ...+..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 56789999999999999998877 65 356665432110 01 3456778889999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
. ..|.++++++|+|++.||..|++.|++|++|++||+|+|.++ |.. +. +
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~--------~~------------~-------- 199 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEG--------LS------------G-------- 199 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHH--------HH------------H--------
Confidence 3 578999999999999999999999999999999999999877 210 00 0
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
+.+ .+.+..+ .++ .+ ...+| |+.
T Consensus 200 ----------------f~~------~~~ls~~----------------------~~~-~~--------~~~~p-fd~--- 222 (407)
T cd00828 200 ----------------FAN------MGALSTA----------------------EEE-PE--------EMSRP-FDE--- 222 (407)
T ss_pred ----------------HHH------cCCCCCC----------------------CCC-CC--------cccCC-CcC---
Confidence 000 0011000 000 00 01233 322
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC----CCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~----~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
..++..++|||+++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++|++++|||++|.|
T Consensus 223 --~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~h 300 (407)
T cd00828 223 --TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAH 300 (407)
T ss_pred --CCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecc
Confidence 245666899999999999999999999999999999886543221 23456789999999999999999999999
Q ss_pred ccchH----HHHHHHHH-cCCC--CCCCCCCCCccccCCccchhHHHHHh
Q 015474 362 EAFAS----QFVYCRNK-LGLD--PEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 362 d~fa~----~~l~~~e~-lGl~--~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
++.+. .+...++. ++-. +.+|+...+ .+||..+|+|+.+++
T Consensus 301 gtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~--~~Gh~~~Asg~~~l~ 348 (407)
T cd00828 301 GTSTPANDVAESRAIAEVAGALGAPLPVTAQKA--LFGHSKGAAGALQLI 348 (407)
T ss_pred cccCccccHHHHHHHHHHHhccCCCceeecccc--hhccchhhhhHHHHH
Confidence 98884 34444433 3432 335554444 489999999998875
No 78
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.87 E-value=9.8e-21 Score=191.50 Aligned_cols=238 Identities=21% Similarity=0.220 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--eEEEEeecCCCC-----------CC--------------ccHHHHHHHHcCCCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPE 127 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID--~v~~g~~~~~~~-----------~~--------------~~~a~~va~~lGl~~ 127 (406)
...++..++++||+|||++..+-+ ++++|+..+... .+ ...+..++..+|+
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~-- 160 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA-- 160 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--
Confidence 355788899999999997432222 366776543311 00 1235567888888
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHc
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (406)
..|.+++.++|+|++.||..|++.|++|++|++|++|+|..... . . ..+.
T Consensus 161 ~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~-~--------~------------~~~f--------- 210 (418)
T PRK07910 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEA-V--------P------------IAGF--------- 210 (418)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCH-H--------H------------HHHH---------
Confidence 67899999999999999999999999999999999999986540 0 0 0000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCC-CccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCc
Q 015474 208 GVTRKEQDQAAVDSHRKAAAATAAGK-FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (406)
Q Consensus 208 g~sre~~~~~a~~s~~~A~~~~~ag~-~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~l 286 (406)
.+ .|. +.. .. -++++ ..|| |+.+
T Consensus 211 ---------------~~------~~~~ls~-------~~------------~~~~~------------~~rP-Fd~~--- 234 (418)
T PRK07910 211 ---------------AQ------MRIVMST-------NN------------DDPAG------------ACRP-FDKD--- 234 (418)
T ss_pred ---------------Hh------cCCcccc-------CC------------CCCCC------------CcCC-CcCC---
Confidence 00 000 100 00 00111 1334 5541
Q ss_pred ccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeec-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 287 t~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
.+...++||++++||++++.|+++|.+++++|+|++.+.. .|+..+.+...+++++|+++||+++|||++|.|
T Consensus 235 --~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 235 --RDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred --CCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 1333389999999999999999999999999999988652 344445566789999999999999999999999
Q ss_pred ccchH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 362 EAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 362 d~fa~----~~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
.+.+. .+...+ +.+|-...+|+ .-+-.+||+.||+|+.+++
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~~~~v~--s~K~~~GH~~~AaG~~~li 358 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGHRPAVY--APKSALGHSVGAVGAVESI 358 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCCCCcee--CccccccccHHHHHHHHHH
Confidence 98873 344444 44664322343 3344599999999998864
No 79
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.86 E-value=4.6e-20 Score=184.93 Aligned_cols=225 Identities=15% Similarity=0.070 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCCC-------------------------------------Cc
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------------------RA 113 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~~-------------------------------------~~ 113 (406)
...|+..++++||+|+|++..+.+ ++++|+..+.... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567889999999999999654332 3677765543110 01
Q ss_pred cHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccC
Q 015474 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCL 193 (406)
Q Consensus 114 ~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
..+..++..+|+ +.|.+++.++|+||+.||..|++.|++|++|++||+|+|.... |.
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~-------------------- 209 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PD-------------------- 209 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH--------------------
Confidence 245678889999 6899999999999999999999999999999999999997544 10
Q ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhh
Q 015474 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (406)
Q Consensus 194 ~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l 273 (406)
.+.. +.. -+.+...
T Consensus 210 ---~~~~---------------------~~~------~~~ls~~------------------------------------ 223 (398)
T PRK06519 210 ---MLLL---------------------YEL------GGLLLKG------------------------------------ 223 (398)
T ss_pred ---HHHH---------------------HHH------cCccCCC------------------------------------
Confidence 0000 000 0011000
Q ss_pred hhcCCccc-----CCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCCCCCHHHHHHHHHHHc
Q 015474 274 AKLKPVFK-----KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348 (406)
Q Consensus 274 ~~~~p~~~-----~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~A~~~al~~A 348 (406)
..+|.|+ .+|++ ++|||+++||++++.|+++|.+++++|.|++... .+. ...+...++++||++|
T Consensus 224 -~~~p~~d~~~~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~-~~~~~~~am~~AL~~A 293 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR-APGDLEASLERLLKPA 293 (398)
T ss_pred -CCCchhccCccCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC-ChHHHHHHHHHHHHHC
Confidence 0011121 23444 8999999999999999999999999999996533 222 2235568999999999
Q ss_pred CCCCCCccEEEccccchH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 349 GLQLDDIDLFEINEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 349 Gl~~~DID~~e~hd~fa~----~~l~~~e~-lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|+ ++|||+++.|-.-+. .+...++. ++ .||+...+. +||.+||+|+..++
T Consensus 294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~Ks~--~GH~l~AAGa~e~i 348 (398)
T PRK06519 294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA---GPVRGIGTL--FGHTMEAQFPLGLA 348 (398)
T ss_pred CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC---CCccccchh--hccchHHHHHHHHH
Confidence 99 899999999977553 35444443 45 357766664 89999999988764
No 80
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.85 E-value=1.4e-20 Score=190.78 Aligned_cols=236 Identities=24% Similarity=0.280 Sum_probs=163.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCe----EEEEeecCCCC------------------CCccHHHHHHHHcCCCCCCce
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~----v~~g~~~~~~~------------------~~~~~a~~va~~lGl~~~~~~ 131 (406)
+..+|+.+++++||+|+|++++++|. +++|+..++.. .....+..++..+|+ ..|.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCc
Confidence 35789999999999999999988875 66665432110 012356678999999 5699
Q ss_pred EEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCH
Q 015474 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 211 (406)
Q Consensus 132 ~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sr 211 (406)
++++.+|+|++.||..|++.|++|.+|++||+|+|.+... . ..
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~-~-----------------------~~------------- 206 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSP-D-----------------------MF------------- 206 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCH-H-----------------------HH-------------
Confidence 9999999999999999999999999999999999986540 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCC
Q 015474 212 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 291 (406)
Q Consensus 212 e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~ 291 (406)
..+.. .|.+. ++. ..+| |+. ..++
T Consensus 207 --------~~~~~------~~~l~------------------------~~~------------~~~p-f~~-----~~~g 230 (421)
T cd00833 207 --------VGFSK------AGMLS------------------------PDG------------RCRP-FDA-----DADG 230 (421)
T ss_pred --------HHHhh------CCCCC------------------------CCC------------CCCC-CCC-----CCCC
Confidence 00000 00110 000 1122 221 1244
Q ss_pred CCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC--C---CCCCHHHHHHHHHHHcCCCCCCccEEEccccchH
Q 015474 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA--I---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (406)
Q Consensus 292 ~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~--~---~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~ 366 (406)
..++|||+++||++++.|++++.+++++|.+++....... . ...+...+++++|+++|++++|||++|.|...+.
T Consensus 231 ~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 231 YVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred eeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 4589999999999999999999999999999887543211 1 1234468999999999999999999999988864
Q ss_pred H----HHHHHHH-cCCC---CCCCCCCCCccccCCccchhHHHHHh
Q 015474 367 Q----FVYCRNK-LGLD---PEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 367 ~----~l~~~e~-lGl~---~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
. +...++. ++-. ..++..+.-+..+||+++|+|+.+++
T Consensus 311 ~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 311 LGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 3 3323322 2221 12233222233489999999998775
No 81
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.85 E-value=8.1e-20 Score=184.20 Aligned_cols=236 Identities=18% Similarity=0.230 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCC----eEEEEeecCCCC--------------C-----------CccHHHHHHHHcC
Q 015474 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS--------------Q-----------RASECRMAAFYAG 124 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~-~~ID----~v~~g~~~~~~~--------------~-----------~~~~a~~va~~lG 124 (406)
...|+..++++||+|||++. ..++ ++++|+..+... . ....+..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 45688899999999999843 2232 577776543210 0 0124667889999
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+ ..|.+++.++|+|+++||..|++.|++|++|++|++|+|..+... ..+.
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~----------------------~~~f------ 202 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTE----------------------AAVF------ 202 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHH----------------------HHHH------
Confidence 9 689999999999999999999999999999999999999754300 0000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCC
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g 284 (406)
+..-..+ ... .+++. ..|| |+.+
T Consensus 203 ----------~~l~~~~-----------~~~----------------------~~~~~------------~~rP-fd~~- 225 (405)
T PRK09116 203 ----------DTLFATS-----------TRN----------------------DAPEL------------TPRP-FDAN- 225 (405)
T ss_pred ----------HHhhhhc-----------cCC----------------------CCCCC------------CCCC-CcCC-
Confidence 0000000 000 00000 1233 4431
Q ss_pred CcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC---CCCCHHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 285 ~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~---~~~~~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
.+...++|||+++||++++.|+++|.+++++|.|++.+...... ...+...+++++|+++|++++|||+++.|
T Consensus 226 ----~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~H 301 (405)
T PRK09116 226 ----RDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAH 301 (405)
T ss_pred ----CCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECc
Confidence 23334899999999999999999999999999999886532211 12234689999999999999999999999
Q ss_pred ccchH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 362 EAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 362 d~fa~----~~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
.+.+. .+...+ +.+| ...||+...+ .+||++||+|+.+++
T Consensus 302 gtgt~~~D~~E~~Ai~~~fg-~~~pv~s~K~--~~GH~~~AaG~~~~~ 346 (405)
T PRK09116 302 GTATDRGDIAESQATAAVFG-ARMPISSLKS--YFGHTLGACGALEAW 346 (405)
T ss_pred CccCCCCCHHHHHHHHHHhC-CCCeeECcch--hhcccHHHHHHHHHH
Confidence 87763 344333 4455 2334543333 489999999987764
No 82
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.85 E-value=7.9e-20 Score=185.52 Aligned_cols=239 Identities=19% Similarity=0.211 Sum_probs=160.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCe------------------EEEEeecCCC-------------C--------CCcc
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGD------------------IVVGTVLAPG-------------S--------QRAS 114 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~------------------v~~g~~~~~~-------------~--------~~~~ 114 (406)
....|+..++++||+|||+++.+++. ++.+...... . ....
T Consensus 74 ~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (425)
T PRK06501 74 LSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGS 153 (425)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccH
Confidence 34678889999999999996544321 1111110000 0 0123
Q ss_pred HHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCc
Q 015474 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (406)
Q Consensus 115 ~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (406)
.+..++..+|+ ..+.++++.+|+|++.||..|+++|++|++|++||+|+|.... +
T Consensus 154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~---------------------- 208 (425)
T PRK06501 154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-A---------------------- 208 (425)
T ss_pred HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-H----------------------
Confidence 46678889999 5789999999999999999999999999999999999995322 0
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhh
Q 015474 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (406)
Q Consensus 195 ~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~ 274 (406)
. .+..|.... .+... .+ ..++
T Consensus 209 -~----------------~~~~~~~~~-----------~ls~~--------~~-----------~~~~------------ 229 (425)
T PRK06501 209 -E----------------ALIRFSLLS-----------ALSTQ--------ND-----------PPEK------------ 229 (425)
T ss_pred -H----------------HHHHHHHhh-----------ccccC--------CC-----------CCCc------------
Confidence 0 000010000 00000 00 0011
Q ss_pred hcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecC-----CCCCCCCHHHHHHHHHHHcC
Q 015474 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAG 349 (406)
Q Consensus 275 ~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~A~~~al~~AG 349 (406)
..|| |+.+ .+...++||++++||++.+.|+++|.++++.+.+++..... +...+.+...+++++|+++|
T Consensus 230 ~~rp-fd~~-----r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~ag 303 (425)
T PRK06501 230 ASKP-FSKD-----RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAG 303 (425)
T ss_pred ccCC-CCCC-----CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 2344 4432 12234899999999999999999999999999999875432 11122344689999999999
Q ss_pred CCCCCccEEEccccchHH----HHHHH-HHcCC--CCCCCCCCCCccccCCccchhHHHHHh
Q 015474 350 LQLDDIDLFEINEAFASQ----FVYCR-NKLGL--DPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 350 l~~~DID~~e~hd~fa~~----~l~~~-e~lGl--~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
++++|||+++.|+..+.. +...+ +.+|- ...|||..+|.+ ||++||+|+.+++
T Consensus 304 i~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~--Gh~~~AsG~~~~~ 363 (425)
T PRK06501 304 LTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMI--GHTLTAAGAVEAV 363 (425)
T ss_pred CCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCccc--CCCchhhhHHHHH
Confidence 999999999999988753 22222 23442 124788888875 9999999998874
No 83
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.85 E-value=9.8e-20 Score=183.38 Aligned_cols=236 Identities=19% Similarity=0.230 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCC-----------CC--------------ccHHHHHHHHcCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGF 125 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~-----------~~--------------~~~a~~va~~lGl 125 (406)
...|+..++++||+|+|++++.++ ++++|+..+... .+ ...+..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467889999999999999877654 477776543220 00 1235678889999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
..|.++++++|+|++.||..|++.|++|+ |++|++|+|.... | +.+
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p-----------------------~~~------- 196 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-P-----------------------WGW------- 196 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-H-----------------------HHH-------
Confidence 68999999999999999999999999999 9999999997554 0 000
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
..+.. .+.+... .+| .+ ..|| |+.+
T Consensus 197 --------------~~~~~------~~~ls~~--------~~p------------~~------------~~rP-Fd~~-- 221 (399)
T cd00832 197 --------------VAQLS------SGRLSTS--------DDP------------AR------------AYLP-FDAA-- 221 (399)
T ss_pred --------------HHHHh------ccccCCC--------CCC------------CC------------CcCC-CcCC--
Confidence 00000 0011000 000 01 2344 5441
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC--CCCCCHHHHHHHHHHHcCCCCCCccEEEcccc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA--IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~--~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~ 363 (406)
.+...++||++++||++++.|+++|.+++++|.|++.+..... ..+.+...+++++|+++|++++|||+++.|.+
T Consensus 222 ---~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgt 298 (399)
T cd00832 222 ---AAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAA 298 (399)
T ss_pred ---CCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeccC
Confidence 2333489999999999999999999999999999998653221 12345568999999999999999999999966
Q ss_pred chH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 364 FAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 364 fa~----~~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
-+. .+...+ +.+|-...||+...+ .+||+++|+|+.+++
T Consensus 299 gt~~~D~~E~~al~~~fg~~~~pv~s~K~--~~Gh~~~aaG~~~l~ 342 (399)
T cd00832 299 GVPELDRAEAAALAAVFGPRGVPVTAPKT--MTGRLYAGGAPLDVA 342 (399)
T ss_pred cCCCCCHHHHHHHHHHhCCCCCceeCCCc--hhcchHHHHHHHHHH
Confidence 553 344334 345644445554444 379999999998875
No 84
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.84 E-value=1.9e-19 Score=181.89 Aligned_cols=237 Identities=20% Similarity=0.239 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCe----EEEEeecCCCC-------------------------CCccHHHHHHHHcCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~----v~~g~~~~~~~-------------------------~~~~~a~~va~~lGl 125 (406)
..+|+..++++||+|+|+++.+++. +++|+...... .....+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 5788999999999999999888874 44444321110 011456778899999
Q ss_pred CCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHH
Q 015474 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (406)
Q Consensus 126 ~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (406)
..|.+++..+|+|++.||..|++.|++|++|++|++|+|.... | +..
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~-----------------------~~~------- 198 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-P-----------------------VGI------- 198 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-H-----------------------HHH-------
Confidence 5789999999999999999999999999999999999997543 0 000
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCC
Q 015474 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (406)
Q Consensus 206 ~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~ 285 (406)
..+.+ .+.+... . .+++. ..|| |+.+
T Consensus 199 --------------~~f~~------~~~ls~~-------~------------~~p~~------------~~rp-fd~~-- 224 (406)
T PRK08439 199 --------------GGFAA------MKALSTR-------N------------DDPKK------------ASRP-FDKD-- 224 (406)
T ss_pred --------------HHHHH------hCccccC-------C------------CCCcc------------CcCC-ccCC--
Confidence 00000 0011000 0 00011 1234 4431
Q ss_pred cccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCCC---CCCHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 286 lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~---~~~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
.+...++||++++||++++.|+++|.+++++|.|++..+...... ..+...+++++|+++|+ +|||++|.|.
T Consensus 225 ---~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hg 299 (406)
T PRK08439 225 ---RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINAHG 299 (406)
T ss_pred ---CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEccC
Confidence 123338999999999999999999999999999998754321111 13456899999999998 8999999997
Q ss_pred cchH----HHHHHHH-HcCCCCCCCCCCCCccc-cCCccchhHHHHHh
Q 015474 363 AFAS----QFVYCRN-KLGLDPEKINVNGGALA-IGHPLGTTGNCCSN 404 (406)
Q Consensus 363 ~fa~----~~l~~~e-~lGl~~~~vN~~GG~~a-~Ghp~GatG~~~v~ 404 (406)
..+. .+...++ .+|-....+ +-+..++ +||++||+|+.+++
T Consensus 300 tgt~~~D~~E~~al~~~f~~~~~~~-~v~s~K~~~Gh~~~AsG~~~~~ 346 (406)
T PRK08439 300 TSTPYNDKNETAALKELFGSKEKVP-PVSSTKGQIGHCLGAAGAIEAV 346 (406)
T ss_pred CcCCCCCHHHHHHHHHHhcccCCCC-eEECcccccccCchhhhHHHHH
Confidence 7654 3444443 345322222 1233333 89999999998764
No 85
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.83 E-value=5.5e-20 Score=177.40 Aligned_cols=209 Identities=24% Similarity=0.312 Sum_probs=159.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.+..+|+.+|+++||++||++|+|||.|++.+..++.. .+..+..++..||+. ++++++++.+|++.++||..|..
T Consensus 48 ~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~~~afDl~aaCsgf~yaL~~A~~ 125 (323)
T COG0332 48 DDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-GAPAFDLQAACSGFLYALSVADG 125 (323)
T ss_pred CCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-CcceeechhhhHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999887 788999999999995 68999999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
+|++|.++.+||+|.|..|+.- +|
T Consensus 126 ~i~sG~~k~vLVVg~e~~S~~l-d~------------------------------------------------------- 149 (323)
T COG0332 126 LIRSGGYKNVLVVGAETLSRIL-DW------------------------------------------------------- 149 (323)
T ss_pred HHHcCCCCEEEEEehhHhhccC-CH-------------------------------------------------------
Confidence 9999999999999999988710 00
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
.+ | ..|-.++|||+||||...+ .
T Consensus 150 ----~d----------------------------R-----------------------~t~vlFgDGAgAvvl~~~~--~ 172 (323)
T COG0332 150 ----TD----------------------------R-----------------------DTCVLFGDGAGAVVLEATE--D 172 (323)
T ss_pred ----hh----------------------------c-----------------------cceEEEcCCceEEEEecCC--C
Confidence 00 0 1233388999999998775 2
Q ss_pred hcCCCceEEEEEEEEee------------cCC---C--C-CCCCH----------HHHHHHHHHHcCCCCCCccEEEccc
Q 015474 311 RKGLPILGVFRTFAAVG------------VDP---A--I-MGVGP----------AVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~~------------~~p---~--~-~~~~~----------~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
+.++ +..-++..... ..+ . . ...+. ..+++++|+++||+++|||+|-.|+
T Consensus 173 ~~~i--~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ 250 (323)
T COG0332 173 DNGI--LDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ 250 (323)
T ss_pred CcCe--eeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc
Confidence 2221 11111111000 000 0 0 00121 2688999999999999999999999
Q ss_pred cchHHHHHHHHHcCCCCCCCCCCCCccccCCccchh
Q 015474 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTT 398 (406)
Q Consensus 363 ~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~Gat 398 (406)
+.....-...+.||++++++..+-.. +|+...||
T Consensus 251 an~ri~~~i~~~l~~~~~k~~~~~~~--yGNtsaAs 284 (323)
T COG0332 251 ANLRIIEAIAKKLGIPEEKVVVTVDK--YGNTSAAS 284 (323)
T ss_pred ccHHHHHHHHHHcCCCHHHHhhHHHH--hcccccch
Confidence 99999999999999988765544322 45555444
No 86
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.82 E-value=4e-19 Score=175.79 Aligned_cols=228 Identities=20% Similarity=0.173 Sum_probs=160.0
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCCCCCCeEEEEee-----cCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTV-----LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 145 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAg-l~~~~ID~v~~g~~-----~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai 145 (406)
+.+..+|+..|++++|++++ +++++||.+++... .+... .......++.++|+....+.++++.+|+||.+||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDL-EERLLRELEARLGLRLEPGSAVIARGRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcch-HHHHHHHHHHHhCCCCCCCcccccccchHHHHHH
Confidence 34778999999999999999 78999998877432 11111 1234567888999854567899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 015474 146 ADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKA 225 (406)
Q Consensus 146 ~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A 225 (406)
..|++.|++|++|.+||+|+|.++.... +. .+...
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~----------------------~~-----------------------~~~~~ 175 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPT----------------------LA-----------------------HYEAR 175 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHH----------------------HH-----------------------HHHHh
Confidence 9999999999999999999998776100 00 00000
Q ss_pred HHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecC
Q 015474 226 AAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 305 (406)
Q Consensus 226 ~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s 305 (406)
.. .+. .| +.+|+ .++|||+++||++
T Consensus 176 ----~~-l~~------------------------~~-------------------~~~G~-------v~GEGA~a~vLe~ 200 (348)
T PRK06147 176 ----DR-LLT------------------------SQ-------------------NSNGF-------IPGEAAAAVLLGR 200 (348)
T ss_pred ----hc-cCC------------------------CC-------------------CCCce-------eeeceEEEEEEcc
Confidence 00 000 00 01233 3899999999999
Q ss_pred HHHHHhcCCCceEEEEEEEEeecC------CCCCCCCHHHHHHHHHHHcCCCCCCccEEEccccchHH----HH-HHHHH
Q 015474 306 RSVAMRKGLPILGVFRTFAAVGVD------PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FV-YCRNK 374 (406)
Q Consensus 306 ~~~A~~~g~~~~a~i~g~~~~~~~------p~~~~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~----~l-~~~e~ 374 (406)
.+.|++++.++++ .+++..... +...+.+...+++++|+++|++++|||+++.|-..+.. +. ...+.
T Consensus 201 ~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~ 278 (348)
T PRK06147 201 PAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRL 278 (348)
T ss_pred HhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHH
Confidence 9999999998887 444443211 11134456789999999999999999999999664432 22 23344
Q ss_pred cCCC--CCCCCCCCCccccCCccchhHHHHHh
Q 015474 375 LGLD--PEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 375 lGl~--~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
+|-. +.+++...+ .+||.++|+|+.+++
T Consensus 279 f~~~~~~~~~~~~k~--~~Gh~~aAaG~~~~~ 308 (348)
T PRK06147 279 FRVRKEFFDLWHPAE--CIGEIGAAIGPALLG 308 (348)
T ss_pred hhhccCCCceecchH--hhcchHHHHHHHHHH
Confidence 5532 235654433 489999999998875
No 87
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.80 E-value=2.8e-18 Score=172.86 Aligned_cols=233 Identities=15% Similarity=0.225 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCC------------C--------------CccHHHHHHHHcC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------Q--------------RASECRMAAFYAG 124 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~------------~--------------~~~~a~~va~~lG 124 (406)
...++..++++||+|+|+++.+.+ ++++|+..+... . ....+..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 467888999999999999765544 366665432210 0 0125667889999
Q ss_pred CCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHH
Q 015474 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (406)
Q Consensus 125 l~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (406)
+ ..|.++++++|+|++.||..|++.|++|++|++||+|+|..+.. + ..+..+
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~-----------~-----------~~~f~~---- 202 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWE-----------M-----------SCLFDA---- 202 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChH-----------H-----------HHHHHH----
Confidence 9 68999999999999999999999999999999999999964330 0 000000
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccC--
Q 015474 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-- 282 (406)
Q Consensus 205 ~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~-- 282 (406)
. .+. .. .+. .+++. ..|| |+.
T Consensus 203 ------------~------~~l-s~---~~~----------------------~~p~~------------~~rP-Fd~~r 225 (406)
T PRK07967 203 ------------M------GAL-ST---KYN----------------------DTPEK------------ASRA-YDANR 225 (406)
T ss_pred ------------h------hhh-cc---CCC----------------------CCCCc------------CCcC-CcCCC
Confidence 0 000 00 000 00111 2334 544
Q ss_pred CCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC---CCCCHHHHHHHHHHHcCCCCCCccEEE
Q 015474 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (406)
Q Consensus 283 ~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~---~~~~~~~A~~~al~~AGl~~~DID~~e 359 (406)
+|++ ++|||+++||++.+.|+++|.+|+++|.|++.+...... .+.+...+++++|+.++ + |||+++
T Consensus 226 ~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~ 295 (406)
T PRK07967 226 DGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYIN 295 (406)
T ss_pred Ccee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEE
Confidence 3444 899999999999999999999999999999986532211 23455689999998654 4 999999
Q ss_pred ccccchH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 360 INEAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 360 ~hd~fa~----~~l~~~-e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
.|..-+. .+...+ +.+|-...+|+..-+ .+||.+||+|+..++
T Consensus 296 aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~s~K~--~~GH~~~AaG~~e~i 343 (406)
T PRK07967 296 THGTSTPVGDVKELGAIREVFGDKSPAISATKS--LTGHSLGAAGVQEAI 343 (406)
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCCCCeeECccc--ccccCccccchHHHH
Confidence 9966553 344333 335643234554444 489999999988764
No 88
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.79 E-value=2.4e-18 Score=168.27 Aligned_cols=226 Identities=23% Similarity=0.263 Sum_probs=165.0
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCC
Q 015474 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (406)
Q Consensus 59 ~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~C 138 (406)
+|++.+ +....++.+..+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|+ .+.++++++.+|
T Consensus 37 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~-~~~~~~~v~~~C 113 (319)
T PRK09352 37 RTGIKE-RRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGA-KNAAAFDLSAAC 113 (319)
T ss_pred hcCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCC-CCCcEeeccccc
Confidence 566654 234457889999999999999999999999999999998876543 35567889999999 477999999999
Q ss_pred chHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHH
Q 015474 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (406)
Q Consensus 139 aSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a 218 (406)
+||+.||..|++.|++|.+|++|++|+|+++... .
T Consensus 114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-~-------------------------------------------- 148 (319)
T PRK09352 114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV-D-------------------------------------------- 148 (319)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-C--------------------------------------------
Confidence 9999999999999999999999999999987510 0
Q ss_pred HHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcc
Q 015474 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (406)
Q Consensus 219 ~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGA 298 (406)
+.+ + ..+..++|||
T Consensus 149 ---------------~~~----------------------------~-----------------------~~~~~~gDGa 162 (319)
T PRK09352 149 ---------------WTD----------------------------R-----------------------STCVLFGDGA 162 (319)
T ss_pred ---------------ccc----------------------------C-----------------------CceEEEeccc
Confidence 000 0 0112378999
Q ss_pred eEEEecCHHHHHhcCCCceEEEEEEEEee---cCCCC-------------CCC--------CHHHHHHHHHHHcCCCCCC
Q 015474 299 GAVLLMKRSVAMRKGLPILGVFRTFAAVG---VDPAI-------------MGV--------GPAVAIPAAVKSAGLQLDD 354 (406)
Q Consensus 299 aAvvL~s~~~A~~~g~~~~a~i~g~~~~~---~~p~~-------------~~~--------~~~~A~~~al~~AGl~~~D 354 (406)
+|+||.+.+.. ++.. ..+...+... ..|.. .+. ....+++++|+++|++++|
T Consensus 163 aA~ll~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~d 238 (319)
T PRK09352 163 GAVVLGASEEP---GILS-THLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPED 238 (319)
T ss_pred eEEEEEEcCCC---CeEE-EEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999986431 1100 0111111000 00100 000 0125888999999999999
Q ss_pred ccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 355 ID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
||+|-+|...........+.||++++++..+ +--+||..+|+=...+.
T Consensus 239 i~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~ 286 (319)
T PRK09352 239 IDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALD 286 (319)
T ss_pred CCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHH
Confidence 9999999998888888999999999877543 22489998887655543
No 89
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.77 E-value=4.1e-18 Score=167.32 Aligned_cols=109 Identities=18% Similarity=0.208 Sum_probs=95.5
Q ss_pred eecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCC
Q 015474 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (406)
Q Consensus 58 ~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~ 137 (406)
.+|++.+ +....++.+..+|+.+|++++|+++|+++++||.++++++.+... ...+..++..+|+. +.++++++++
T Consensus 35 ~~~gi~~-r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~~~v~~~ 110 (326)
T CHL00203 35 TRTGIKK-RHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVAFDITAA 110 (326)
T ss_pred eccCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCceeeeccc
Confidence 6788865 345667889999999999999999999999999999998776543 23456788899995 6889999999
Q ss_pred CchHHHHHHHHHHHHHcCCCCEEEEEeecCCCC
Q 015474 138 CSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 138 CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~ 170 (406)
|+||+.+|..|.+.|++|.++.+|++|+|.||.
T Consensus 111 Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~ 143 (326)
T CHL00203 111 CSGFILALVTATQFIQNGSYKNILVVGADTLSK 143 (326)
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence 999999999999999999999999999999886
No 90
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.77 E-value=7.3e-18 Score=164.83 Aligned_cols=217 Identities=20% Similarity=0.238 Sum_probs=160.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHH
Q 015474 69 GFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV 148 (406)
Q Consensus 69 ~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~A 148 (406)
..++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ +.++++++.+|+|++.+|..|
T Consensus 45 ~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C~s~~~al~~A 122 (318)
T TIGR00747 45 AADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAACAGFIYALSVA 122 (318)
T ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhhHHHHHHHHHH
Confidence 346789999999999999999999999999999998876643 456778899999995 578999999999999999999
Q ss_pred HHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 015474 149 AAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228 (406)
Q Consensus 149 a~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~ 228 (406)
++.|++|.++.+|++|+|.++.. .+
T Consensus 123 ~~~i~~g~~~~~Lvv~~e~~~~~-~~------------------------------------------------------ 147 (318)
T TIGR00747 123 KQYIESGKYKTVLVVGAEKLSST-LD------------------------------------------------------ 147 (318)
T ss_pred HHHHHcCCCCEEEEEEehhhcCc-CC------------------------------------------------------
Confidence 99999999999999999987651 00
Q ss_pred HHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHH
Q 015474 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 308 (406)
Q Consensus 229 ~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~ 308 (406)
+. + | .++..++|||+|+||.+.+.
T Consensus 148 ----~~-~----------------------------~-----------------------~~~~~~GDGAaA~lL~~~~~ 171 (318)
T TIGR00747 148 ----WT-D----------------------------R-----------------------GTCVLFGDGAGAVVLGESED 171 (318)
T ss_pred ----cC-C----------------------------C-----------------------CeEEEEecceeEEEEeecCC
Confidence 00 0 0 01123789999999987653
Q ss_pred HHhcCCCceEEEEEEEEe----ecCCC-------CCC----CC----------HHHHHHHHHHHcCCCCCCccEEEcccc
Q 015474 309 AMRKGLPILGVFRTFAAV----GVDPA-------IMG----VG----------PAVAIPAAVKSAGLQLDDIDLFEINEA 363 (406)
Q Consensus 309 A~~~g~~~~a~i~g~~~~----~~~p~-------~~~----~~----------~~~A~~~al~~AGl~~~DID~~e~hd~ 363 (406)
.. .+.......... ..-|. ..+ .+ ...+++++|+++|++++|||+|-+|..
T Consensus 172 ~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~ 247 (318)
T TIGR00747 172 PG----GIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQA 247 (318)
T ss_pred CC----cEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 21 111111010000 00000 000 01 135788899999999999999999999
Q ss_pred chHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 364 fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
.........+.||++++++..+ .--+||..+|+=...+.
T Consensus 248 ~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~ 286 (318)
T TIGR00747 248 NLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALD 286 (318)
T ss_pred CHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHH
Confidence 9998888999999999876643 22489998887665554
No 91
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.76 E-value=1.1e-17 Score=164.96 Aligned_cols=228 Identities=17% Similarity=0.169 Sum_probs=161.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++.++|++..+++++++.+|+|++.||..|.+
T Consensus 57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~ 135 (338)
T PRK09258 57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAAN 135 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHH
Confidence 3678999999999999999999999999999998876655 567889999999996568899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|++++|.++... ++. + ..
T Consensus 136 ~i~~g~~~~~Lvv~~e~~s~~~-~~~-------------------~--------------------------~~------ 163 (338)
T PRK09258 136 MIELGQIDYALVVSGESAREIV-EAT-------------------I--------------------------DR------ 163 (338)
T ss_pred HHHcCCCCEEEEEEecccchhc-cch-------------------h--------------------------hh------
Confidence 9999999999999999877611 000 0 00
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
+..+ + .+.+. | ........++|||+|+||.+.+..
T Consensus 164 --~~~~-------------------------~-----~~~~~-------~-----~~~~~~~~~GDGA~A~ll~~~~~~- 198 (338)
T PRK09258 164 --LLAP-------------------------E-----TTRED-------F-----AQSFATLTLGSGAAAAVLTRGSLH- 198 (338)
T ss_pred --hccC-------------------------c-----cchhh-------h-----hhccceEEecccceEEEEecCCCC-
Confidence 0000 0 00000 0 000122337899999999875421
Q ss_pred hcCCCceEEEEEEEEeecCCC----------CC-CCC----------HHHHHHHHHHHcCCCCCCccEEEccccchHHHH
Q 015474 311 RKGLPILGVFRTFAAVGVDPA----------IM-GVG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~~~~p~----------~~-~~~----------~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l 369 (406)
..+ ..+++.... .++. .+ ..+ ...+++++|+++|++++|||+|-+|.......-
T Consensus 199 ~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~~ 273 (338)
T PRK09258 199 PRG----HRLLGGVTR-AATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHTR 273 (338)
T ss_pred CCc----ceeeeeeee-cCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHHH
Confidence 011 123332211 1111 11 011 124788999999999999999999999998888
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchhHHHHH
Q 015474 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 370 ~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
...+.||++++++-.+- --+||..+++=...+
T Consensus 274 ~~~~~lgl~~~k~~~~~--~~~GN~~sas~~~~L 305 (338)
T PRK09258 274 AILKALGIDPEKVFTTF--PTLGNMGPASLPITL 305 (338)
T ss_pred HHHHHhCCCHHHceehH--hhhCCcHHhHHHHHH
Confidence 89999999988764432 248888887654433
No 92
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.76 E-value=2.3e-17 Score=193.94 Aligned_cols=233 Identities=20% Similarity=0.224 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCC-----------------------------------------
Q 015474 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS----------------------------------------- 110 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~----------------------------------------- 110 (406)
..|+.+++++||+|||++++ .+ ++++|...+...
T Consensus 94 qrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 94 QLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 45788999999999999643 33 477775432100
Q ss_pred -----C---CccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChh
Q 015474 111 -----Q---RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPK 182 (406)
Q Consensus 111 -----~---~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~ 182 (406)
. ....+..++..+|| ++|.++|+++|+|++.||++|++.|++|++|++|++|++.... |.
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~--------- 240 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PF--------- 240 (2582)
T ss_pred CccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HH---------
Confidence 0 01346778999999 7899999999999999999999999999999999999986543 10
Q ss_pred hhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccC
Q 015474 183 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (406)
Q Consensus 183 ~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de 262 (406)
..++ +.+ .+. ++.|+
T Consensus 241 -----------~~~~------------------------fs~------~~~------------------------lS~~g 255 (2582)
T TIGR02813 241 -----------MYMS------------------------FSK------TPA------------------------FTTNE 255 (2582)
T ss_pred -----------HHHH------------------------HHh------ccC------------------------cCCCC
Confidence 0000 000 001 22233
Q ss_pred CCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCC--CCC---CCCH
Q 015474 263 GIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--AIM---GVGP 337 (406)
Q Consensus 263 ~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p--~~~---~~~~ 337 (406)
.+| | ||.+ .|...++||++++||.+.+.|++.|.+|+++|.|++.+.... ... ..+.
T Consensus 256 ~cr------------p-FD~~-----adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq 317 (2582)
T TIGR02813 256 DIQ------------P-FDID-----SKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQ 317 (2582)
T ss_pred Ccc------------C-CCCC-----CCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHH
Confidence 233 3 5541 233348999999999999999999999999999999875432 111 1234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccchH----HHHHHH-HHcCCCC---CCCCCCCCcc-ccCCccchhHHHHHhh
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAFAS----QFVYCR-NKLGLDP---EKINVNGGAL-AIGHPLGTTGNCCSNC 405 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~fa~----~~l~~~-e~lGl~~---~~vN~~GG~~-a~Ghp~GatG~~~v~~ 405 (406)
..+++++|++||++++||||+|.|..-+. .++..+ +.+|-.. .++-. |..+ .+||..+|+|+..++.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~v-gSvKs~iGH~~~AAG~a~lik 393 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIAL-GSVKSQIGHTKSTAGTAGMIK 393 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCcee-eccccccccchHhHHHHHHHH
Confidence 68999999999999999999999976653 333333 3455321 22322 3333 4899999999988763
No 93
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.76 E-value=1.7e-17 Score=162.21 Aligned_cols=215 Identities=24% Similarity=0.254 Sum_probs=160.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ +.++++++.+|+|+..+|..|++
T Consensus 46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 4578999999999999999999999999999998876654 466788999999996 78999999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|++++|.++... +
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~~~-~-------------------------------------------------------- 146 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSRIL-D-------------------------------------------------------- 146 (320)
T ss_pred HHHcCCCCEEEEEEehhhcccc-C--------------------------------------------------------
Confidence 9999999999999999987610 0
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
|++ + .....++|||+|+||.+.+.
T Consensus 147 ---~~~----------------------------~-----------------------~~~~~~GDgAaA~ll~~~~~-- 170 (320)
T cd00830 147 ---WTD----------------------------R-----------------------STAVLFGDGAGAVVLEATEE-- 170 (320)
T ss_pred ---ccc----------------------------C-----------------------CceEEEeccceEEEEEecCC--
Confidence 000 0 01122789999999987643
Q ss_pred hcCCCceEEEEEEEEe-----ecC------C--------CC--C-C--------CCHHHHHHHHHHHcCCCCCCccEEEc
Q 015474 311 RKGLPILGVFRTFAAV-----GVD------P--------AI--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~-----~~~------p--------~~--~-~--------~~~~~A~~~al~~AGl~~~DID~~e~ 360 (406)
+..++......... ..+ | .. + + .....+++++|+++|++++|||+|-+
T Consensus 171 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~ 248 (320)
T cd00830 171 --DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVP 248 (320)
T ss_pred --CCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEE
Confidence 11121111110000 000 0 00 0 0 01136889999999999999999999
Q ss_pred cccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 361 hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|.......-...+.||++++++..+- --+||...|+=...+.
T Consensus 249 h~~~~~~~~~~~~~lgl~~~~~~~~~--~~~Gn~~sas~~~~L~ 290 (320)
T cd00830 249 HQANLRIIEAVAKRLGLPEEKVVVNL--DRYGNTSAASIPLALD 290 (320)
T ss_pred CCCCHHHHHHHHHHhCCCHHHhhhhH--HhhCcHHHHHHHHHHH
Confidence 99999988889999999988875432 2489998887655443
No 94
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.75 E-value=2.4e-17 Score=165.13 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=88.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHH
Q 015474 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (406)
Q Consensus 70 ~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa 149 (406)
..+.+..+|+.+|++++|+++|++++|||.+++++..+... ...+..++..+|++ +.++++++.+|+|++.+|..|.
T Consensus 91 ~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~ 167 (379)
T PLN02326 91 SGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAA 167 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeeccccchHHHHHHHHHH
Confidence 35678999999999999999999999999999998766543 34577899999995 7899999999999999999999
Q ss_pred HHHHcCCCCEEEEEeecCCCC
Q 015474 150 AAIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 150 ~~I~sG~~d~vL~~G~E~ms~ 170 (406)
..|++|.++.+|++|+|.++.
T Consensus 168 ~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 168 RFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred HHHHcCCCCEEEEEEechhcC
Confidence 999999999999999999876
No 95
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=5e-17 Score=159.38 Aligned_cols=214 Identities=22% Similarity=0.264 Sum_probs=157.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.+..+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ..+++.++.+|+|++.||..|.+
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~ 126 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG 126 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence 4678999999999999999999999999999998776554 567788899999995 57899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|++++|.++.... +
T Consensus 127 ~l~~g~~~~~Lvv~~e~~s~~~~-~------------------------------------------------------- 150 (325)
T PRK12879 127 LITSGLYKKVLVIGAERLSKVTD-Y------------------------------------------------------- 150 (325)
T ss_pred HHHcCCCCEEEEEEehhhcCcCC-c-------------------------------------------------------
Confidence 99999999999999998775100 0
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
++ | ..+..++|||+|+||.+.+..
T Consensus 151 ------------------------------~~--~-----------------------~~~~~~GDgAaA~ll~~~~~~- 174 (325)
T PRK12879 151 ------------------------------TD--R-----------------------TTCILFGDGAGAVVLEATENE- 174 (325)
T ss_pred ------------------------------cc--c-----------------------CceEEEeecceEEEEEecCCC-
Confidence 00 0 011237899999999875431
Q ss_pred hcCCCceEEEEEEEE----------ee--cCCC--C----CC-CC----------HHHHHHHHHHHcCCCCCCccEEEcc
Q 015474 311 RKGLPILGVFRTFAA----------VG--VDPA--I----MG-VG----------PAVAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~----------~~--~~p~--~----~~-~~----------~~~A~~~al~~AGl~~~DID~~e~h 361 (406)
.+ .+....+... .+ .++. . +. .+ ...+++++|+++|++++|||+|-+|
T Consensus 175 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 175 -PG--FIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred -CC--eEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 11 1111111100 00 0000 0 00 01 1257889999999999999999999
Q ss_pred ccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHH
Q 015474 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 362 d~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
.......-.+.+.||++++++..+ .--+||...|+=...+
T Consensus 252 ~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L 291 (325)
T PRK12879 252 QANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLAL 291 (325)
T ss_pred CCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHH
Confidence 999888888899999998876542 3458999888754433
No 96
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=6.4e-17 Score=161.95 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHH
Q 015474 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 73 ~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I 152 (406)
.+..+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ +.++++++.+|+|++.+|..|...|
T Consensus 61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i 138 (378)
T PRK06816 61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSV 138 (378)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999998876533 344456788899995 5789999999999999999999999
Q ss_pred HcCCCCEEEEEeecCCCC
Q 015474 153 KAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 153 ~sG~~d~vL~~G~E~ms~ 170 (406)
++|.++.+|++|+|.+|.
T Consensus 139 ~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 139 KAGESRNAVATASELASR 156 (378)
T ss_pred HCCCCCEEEEEeEccchh
Confidence 999999999999999987
No 97
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=1e-16 Score=157.54 Aligned_cols=210 Identities=20% Similarity=0.240 Sum_probs=154.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC-CCceEEEcCCCchHHHHHHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~-~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
+.+..+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++. .+++++++.+|+|++.+|..|..
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~ 127 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY 127 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence 568899999999999999999999999999998766543 4667888999999953 36899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|+++.|.++..- +
T Consensus 128 ~l~~g~~~~~Lvv~~e~~s~~~-~-------------------------------------------------------- 150 (329)
T PRK07204 128 AIECGRYKRVLIISSEISSVGL-N-------------------------------------------------------- 150 (329)
T ss_pred HHHCCCCCEEEEEEeccccCCC-C--------------------------------------------------------
Confidence 9999999999999999876510 0
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
+.+ + .++..++|||+|+||.+.+..
T Consensus 151 ---~~~----------------------------~-----------------------~~~~lfGDGAaA~ll~~~~~~- 175 (329)
T PRK07204 151 ---WGQ----------------------------N-----------------------ESCILFGDGAAAVVITKGDHS- 175 (329)
T ss_pred ---ccc----------------------------C-----------------------cceEEEecccEEEEEEEcCCC-
Confidence 000 0 011237899999999875421
Q ss_pred hcCCCceE-------------EEEEEEEeecCCCCC------C-----CC----------HHHHHHHHHHHcCCCCCCcc
Q 015474 311 RKGLPILG-------------VFRTFAAVGVDPAIM------G-----VG----------PAVAIPAAVKSAGLQLDDID 356 (406)
Q Consensus 311 ~~g~~~~a-------------~i~g~~~~~~~p~~~------~-----~~----------~~~A~~~al~~AGl~~~DID 356 (406)
..++. .+.+.+.. .++... . .+ ...+++++|+++|++++|||
T Consensus 176 ---~~il~~~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did 251 (329)
T PRK07204 176 ---SRILASHMETYSSGAHLSEIRGGGTM-IHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADID 251 (329)
T ss_pred ---CcEEEEEEEEecCCCCceEEecCCcC-CCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 11111 11111110 011000 0 01 12688999999999999999
Q ss_pred EEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHH
Q 015474 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGN 400 (406)
Q Consensus 357 ~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~ 400 (406)
+|-+|...........+.||++++++..+ .--+||...++=.
T Consensus 252 ~~~~H~~~~~~~~~i~~~l~l~~e~~~~~--~~~~Gn~~sas~~ 293 (329)
T PRK07204 252 LIVPHQASGPAMRLIRKKLGVDEERFVTI--FEDHGNMIAASIP 293 (329)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCcHHHHHHH
Confidence 99999999998889999999998876522 2247887766543
No 98
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.73 E-value=9.5e-17 Score=158.77 Aligned_cols=210 Identities=15% Similarity=0.264 Sum_probs=153.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
++.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++...+.++++.+|+++..+|..|..
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~ 124 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG 124 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999988766543 455677899999995467899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|+++.|.++..|..
T Consensus 125 ~i~sg~~~~vLVv~~d~~~~~~~~-------------------------------------------------------- 148 (345)
T TIGR00748 125 LVASGMIKYGLAIGADTAQGAPGD-------------------------------------------------------- 148 (345)
T ss_pred HHHcCCCCEEEEEEEeecccCCCc--------------------------------------------------------
Confidence 999999999999999987531100
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
+ + . ...+|||+|+||...+..
T Consensus 149 ----------------------------------~--------------------~---~-~~~GDGAaA~vl~~~~~~- 169 (345)
T TIGR00748 149 ----------------------------------A--------------------L---E-YTAGAGGAAYIIGEKNTV- 169 (345)
T ss_pred ----------------------------------c--------------------C---c-ccCCCceEEEEEccCCcc-
Confidence 0 0 0 015788889888753311
Q ss_pred hcCCCceEEEEEEEEeecC------------CCCCC--CC-------HHHHHHHHHHHcCCCCCCccEEEccccchHHHH
Q 015474 311 RKGLPILGVFRTFAAVGVD------------PAIMG--VG-------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~~~~------------p~~~~--~~-------~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l 369 (406)
..+.+......+ |.... .+ ...+++++|+++|++++|||+|-+|+++..+..
T Consensus 170 -------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~ 242 (345)
T TIGR00748 170 -------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYL 242 (345)
T ss_pred -------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHH
Confidence 111111100000 10000 01 126788999999999999999999999999888
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchhHHHHH
Q 015474 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 370 ~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
.+.+.||++++++..+=-.--+||...|+=-..+
T Consensus 243 ~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L 276 (345)
T TIGR00748 243 VAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGL 276 (345)
T ss_pred HHHHHcCCCHHHeeccccccccCchhhhHHHHHH
Confidence 8999999998775432001248888777754433
No 99
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.73 E-value=5.7e-17 Score=158.73 Aligned_cols=227 Identities=17% Similarity=0.201 Sum_probs=167.3
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE
Q 015474 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (406)
Q Consensus 54 Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~ 133 (406)
-+|+.+..|.. ++.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|++ ..+.++
T Consensus 33 ~~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~~ 104 (324)
T cd00827 33 TTGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAFD 104 (324)
T ss_pred eeecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCceee
Confidence 47888888864 3678999999999999999999999999999998876654 567888999999996 789999
Q ss_pred EcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHH
Q 015474 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (406)
Q Consensus 134 v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 213 (406)
++.+|+|++.||..|++.|++|.++.+|++++|.++..+..
T Consensus 105 v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~~--------------------------------------- 145 (324)
T cd00827 105 LKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDE--------------------------------------- 145 (324)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcccC---------------------------------------
Confidence 99999999999999999999999999999999998862100
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCC
Q 015474 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (406)
Q Consensus 214 ~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~ 293 (406)
+ ..+...
T Consensus 146 ---------------------------------------------------~----------------------~~~~~~ 152 (324)
T cd00827 146 ---------------------------------------------------G----------------------SALEPT 152 (324)
T ss_pred ---------------------------------------------------C----------------------CCcccc
Confidence 0 001223
Q ss_pred CCCcceEEEecCHHHHHhcCCCceEEEEEEE---------Eee-cCCC--------CC-C------------CCHHHHHH
Q 015474 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFA---------AVG-VDPA--------IM-G------------VGPAVAIP 342 (406)
Q Consensus 294 ~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~---------~~~-~~p~--------~~-~------------~~~~~A~~ 342 (406)
++|||+|+||.+.+... ...++....... ... ..+. .+ . .....+++
T Consensus 153 ~gdgaaA~ll~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (324)
T cd00827 153 LGDGAAAMLVSRNPGIL--AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVR 230 (324)
T ss_pred ccCceEEEEEecCcccc--cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHH
Confidence 78999999998765421 111111111100 000 0000 00 0 11236888
Q ss_pred HHHHHcCCCCCCccEEEccccch-HHHHHHHHHcCCCCCCCCCCCC--ccccCCccchhHHHHH
Q 015474 343 AAVKSAGLQLDDIDLFEINEAFA-SQFVYCRNKLGLDPEKINVNGG--ALAIGHPLGTTGNCCS 403 (406)
Q Consensus 343 ~al~~AGl~~~DID~~e~hd~fa-~~~l~~~e~lGl~~~~vN~~GG--~~a~Ghp~GatG~~~v 403 (406)
++|+++|++ +|||+|-+|.... .......+.|+++++++..+-- .--+||...|+=...+
T Consensus 231 ~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 231 KALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 999999999 9999999999998 7777778999998877776532 3348888877755444
No 100
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.73 E-value=1.4e-16 Score=159.33 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
+..+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|+ ..++++++.+|+|++.+|..|++.|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl--~~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGI--EGFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCC--CCcEEEecchhHHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999988765543 34557788999999 36899999999999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
+|.+|.+|++|+|.++.
T Consensus 171 ~g~~~~vLvv~~e~~s~ 187 (372)
T PRK07515 171 SGSARRVLVVNPEICSG 187 (372)
T ss_pred cCCCCEEEEEeeecccc
Confidence 99999999999999875
No 101
>PRK04262 hypothetical protein; Provisional
Probab=99.71 E-value=2.4e-16 Score=156.07 Aligned_cols=209 Identities=17% Similarity=0.256 Sum_probs=152.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++...+++.++.+|++++.+|..|..
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~ 125 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999988766543 455677888999996457889999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|++|.++.+|+++.|.....|.
T Consensus 126 ~i~sg~~~~aLVv~~e~~~~~~~--------------------------------------------------------- 148 (347)
T PRK04262 126 LVKSGMIKYALAIGADTAQGAPG--------------------------------------------------------- 148 (347)
T ss_pred HHHcCCCCEEEEEEEeeeccCCC---------------------------------------------------------
Confidence 99999999999999997211000
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
+ + +. . ..+|||+|+||..++.
T Consensus 149 -----~----------------------------~--------------~~----~------~~GDGA~A~ll~~~~~-- 169 (347)
T PRK04262 149 -----D----------------------------A--------------LE----Y------TAAAGGAAFIIGKEEV-- 169 (347)
T ss_pred -----C----------------------------C--------------CC----C------cCCCCcEEEEEecCcc--
Confidence 0 0 00 0 1478999999875331
Q ss_pred hcCCCceEEEEEEEEeecC------------CCC---C-C-----CCHHHHHHHHHHHcCCCCCCccEEEccccchHHHH
Q 015474 311 RKGLPILGVFRTFAAVGVD------------PAI---M-G-----VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~~~~------------p~~---~-~-----~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l 369 (406)
..+|.+......+ |.. + . .....+++++|+++|++++|||+|-+|..+.....
T Consensus 170 ------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 170 ------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred ------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHH
Confidence 1123221100000 100 0 0 01236888999999999999999999999999998
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchhHHHH
Q 015474 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGNCC 402 (406)
Q Consensus 370 ~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~ 402 (406)
...+.||++++++-.+==.--+||..+|+=...
T Consensus 244 ~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~ 276 (347)
T PRK04262 244 RVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLG 276 (347)
T ss_pred HHHHHcCCCHHHhhccchhhhhCChHHHHHHHH
Confidence 999999999887643211234899888774433
No 102
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.70 E-value=2.4e-16 Score=156.19 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=90.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.+..+|+.+|++++|+++|++++|||.+++++..++.. .+..+..++..||++..++++.++.+|++++++|..|..
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~ 134 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS 134 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999988776 788899999999997678899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCC
Q 015474 151 AIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~ 170 (406)
.|++|..+ +|+++.|..|.
T Consensus 135 ~i~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 135 LIQSGLGK-ILLICGDTLSK 153 (353)
T ss_pred HHHcCCCC-EEEEEehhhhc
Confidence 99999999 99999888765
No 103
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=8.5e-16 Score=170.43 Aligned_cols=233 Identities=22% Similarity=0.259 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----eEEEEeecCCCCCC------------------ccHHHHHHHHcCCCCCCceEE
Q 015474 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQR------------------ASECRMAAFYAGFPETVPVRT 133 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~ID----~v~~g~~~~~~~~~------------------~~~a~~va~~lGl~~~~~~~~ 133 (406)
..|+.+.+++||+|||+++..+. +|+.|....+.... ...+..++..+++ .+|.+.
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~ 169 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVT 169 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcc
Confidence 45899999999999999998887 57777665544311 1256778999999 789999
Q ss_pred EcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHH
Q 015474 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (406)
Q Consensus 134 v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~ 213 (406)
|+++|+|++.|+++|+..|++|+||++|++|+..+-.....+
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~-------------------------------------- 211 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSY-------------------------------------- 211 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCccee--------------------------------------
Confidence 999999999999999999999999999999998765521100
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCC
Q 015474 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (406)
Q Consensus 214 ~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~ 293 (406)
.|.+. -.+++|..+|. |+.+ .|...
T Consensus 212 -------------------~~~~~------------------g~ls~~g~c~~-------------fd~~-----adG~v 236 (1061)
T COG3321 212 -------------------LFSAG------------------GMLSPDGRCKA-------------FDAD-----ADGYV 236 (1061)
T ss_pred -------------------eeecc------------------cCcCCCCccee-------------cccC-----CCCEE
Confidence 00000 01233333332 4431 23333
Q ss_pred CCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCCC--C---CCCHHHHHHHHHHHcCCCCCCccEEEccccchH--
Q 015474 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI--M---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS-- 366 (406)
Q Consensus 294 ~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~--~---~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~-- 366 (406)
.++|++++||...+.|.+-|.+|++.|.|++.+...... . +.+...+++++|+++|+++++|+|+|.|..-+.
T Consensus 237 ~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lG 316 (1061)
T COG3321 237 RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLG 316 (1061)
T ss_pred EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCc
Confidence 789999999999999999999999999999987643221 1 124468999999999999999999999965443
Q ss_pred -----HHHHHHHHcCCC-CCCCCCCCCccc-cCCccchhHHHHHhh
Q 015474 367 -----QFVYCRNKLGLD-PEKINVNGGALA-IGHPLGTTGNCCSNC 405 (406)
Q Consensus 367 -----~~l~~~e~lGl~-~~~vN~~GG~~a-~Ghp~GatG~~~v~~ 405 (406)
..+.. .+|-. +...-..|..++ +||+..|.|+..+++
T Consensus 317 DpiE~~aL~~--v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK 360 (1061)
T COG3321 317 DPIEANALGA--VYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIK 360 (1061)
T ss_pred CHHHHHHHHH--HhccCCCCCcccccccccccccHHHHHHHHHHHH
Confidence 33322 22211 233444455555 999999999998875
No 104
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.65 E-value=3e-15 Score=147.00 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=87.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ +.++++++.+|++++++|..|..
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~ 125 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG 125 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence 4678999999999999999999999999999999887654 466788899999995 67899999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCC
Q 015474 151 AIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~ 170 (406)
.|++|. +.+|++++|..+.
T Consensus 126 ~l~~~~-~~aLVv~~d~~s~ 144 (326)
T PRK05963 126 FVRAQG-KPVLVVAANILSR 144 (326)
T ss_pred HHHcCC-CeEEEEEechhhc
Confidence 999985 8999999997664
No 105
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.65 E-value=1.6e-15 Score=152.51 Aligned_cols=183 Identities=20% Similarity=0.314 Sum_probs=126.2
Q ss_pred HHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCc
Q 015474 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (406)
Q Consensus 115 ~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (406)
.+..++..+|+ ..|.++++.+|+|++.||..|++.|++|++|++||+|+|..+... +
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~----------~----------- 195 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLT----------L----------- 195 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHH----------H-----------
Confidence 56778999999 579999999999999999999999999999999999999644300 0
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhh
Q 015474 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (406)
Q Consensus 195 ~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~ 274 (406)
.+. .+ . +.+.. +
T Consensus 196 -~~~------------------------~~-~-----~~l~~-------------------------~------------ 207 (392)
T PRK09185 196 -NGF------------------------NS-L-----ESLSP-------------------------Q------------ 207 (392)
T ss_pred -HHH------------------------Hh-c-----cccCC-------------------------C------------
Confidence 000 00 0 00000 0
Q ss_pred hcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecC-----CCCCCCCHHHHHHHHHHHcC
Q 015474 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAG 349 (406)
Q Consensus 275 ~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~A~~~al~~AG 349 (406)
..+| |+.. .+...++||++++||++++ +. ..+|.|++..... |+..+.+...+++++|+++|
T Consensus 208 ~~~P-fd~~-----~~G~~~gEGaa~vVLe~~~-----~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Ag 274 (392)
T PRK09185 208 PCRP-FSAN-----RDGINIGEAAAFFLLERED-----DA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAG 274 (392)
T ss_pred ccCC-CcCC-----CCccceeceEEEEEEEEcC-----CC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1122 2221 1223378999999999871 22 2478888775421 22233445689999999999
Q ss_pred CCCCCccEEEccccchH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 350 LQLDDIDLFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 350 l~~~DID~~e~hd~fa~----~~l~~~e-~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|+++|||+++.|...+. .|...+. .+|- ..||+...+. +||+++|+|+.+++
T Consensus 275 l~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~-~~pv~s~K~~--~Gh~~~AaG~~~l~ 331 (392)
T PRK09185 275 LAPADIGYINLHGTATPLNDAMESRAVAAVFGD-GVPCSSTKGL--TGHTLGAAGAVEAA 331 (392)
T ss_pred CCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC-CCceeCCCcc--cccChhhcchHHHH
Confidence 99999999999988875 4444443 3452 3467666665 69999999998875
No 106
>PRK06840 hypothetical protein; Validated
Probab=99.64 E-value=6.1e-15 Score=145.62 Aligned_cols=98 Identities=11% Similarity=0.008 Sum_probs=84.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEee-cCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTV-LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~-~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa 149 (406)
.+.+..+|+.+|++++|+++|++|++||.+++++. .++.. .+..+..++..+|++ ..+++.++.+|++++.+|..|.
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~ 126 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK 126 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence 46789999999999999999999999999986543 33332 355678899999995 6789999999999999999999
Q ss_pred HHHHc-CCCCEEEEEeecCCCC
Q 015474 150 AAIKA-GFYDIGIGAGLESMTV 170 (406)
Q Consensus 150 ~~I~s-G~~d~vL~~G~E~ms~ 170 (406)
+.|++ |.++.+|+++.|..+.
T Consensus 127 ~~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 127 DLLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred HHHhcCCCccEEEEEeeccccc
Confidence 99999 9999999999998665
No 107
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.64 E-value=1.5e-15 Score=151.23 Aligned_cols=218 Identities=17% Similarity=0.145 Sum_probs=153.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc-CCCchHHHHHHHHHHH
Q 015474 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (406)
Q Consensus 73 ~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~CaSg~~Ai~~Aa~~ 151 (406)
....+|+.+|++++|+++|+++++||.+++++..+ .. .+..+..++..+|++..++++.++ .+|++++.+|..|.+.
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~ 160 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHH
Confidence 36899999999999999999999999999988765 32 467788999999996568899998 8999999999999999
Q ss_pred HHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHc
Q 015474 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (406)
Q Consensus 152 I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~a 231 (406)
|++|..+.+|++++|.+|.. +++
T Consensus 161 ~~~~~~~~aLvv~~e~~s~~-~~~-------------------------------------------------------- 183 (361)
T cd00831 161 LEANPGARVLVVSTELCSLW-YRG-------------------------------------------------------- 183 (361)
T ss_pred HHHCCCCEEEEEEeecccce-eCC--------------------------------------------------------
Confidence 99999999999999987761 000
Q ss_pred CCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHh
Q 015474 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (406)
Q Consensus 232 g~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~ 311 (406)
++ +.+. ....+.++|||+|+||.+.+....
T Consensus 184 -----------------------------~d------~~~~---------------~~~~~lfGDgaaA~ll~~~~~~~~ 213 (361)
T cd00831 184 -----------------------------PD------HRSM---------------LVGNALFGDGAAAVLLSNDPRDRR 213 (361)
T ss_pred -----------------------------CC------cHHH---------------hhhhhhccCCceEEEEEcCCCccc
Confidence 00 0000 001223789999999997654311
Q ss_pred cCCCceEEEEEEEEe---------ec--CCC----CCC--------CCHHHHHHHHHHHc--CCCCCCccEEEccccchH
Q 015474 312 KGLPILGVFRTFAAV---------GV--DPA----IMG--------VGPAVAIPAAVKSA--GLQLDDIDLFEINEAFAS 366 (406)
Q Consensus 312 ~g~~~~a~i~g~~~~---------~~--~p~----~~~--------~~~~~A~~~al~~A--Gl~~~DID~~e~hd~fa~ 366 (406)
. ..+...+.+.... .. .+. .+. .....+++++|+++ |++++|||+|-+|.....
T Consensus 214 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~ 292 (361)
T cd00831 214 R-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRA 292 (361)
T ss_pred c-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChH
Confidence 0 0111111111100 00 000 000 01235788999999 999999999999999998
Q ss_pred HHHHHHHHcCCCCCCCCCCCC-ccccCCccchhHH
Q 015474 367 QFVYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGN 400 (406)
Q Consensus 367 ~~l~~~e~lGl~~~~vN~~GG-~~a~Ghp~GatG~ 400 (406)
..-...+.||++++++..+=- +--+||..+||=.
T Consensus 293 i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~ 327 (361)
T cd00831 293 VLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVL 327 (361)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHH
Confidence 888889999999987632100 1237888777643
No 108
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.58 E-value=5e-15 Score=148.63 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=85.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
+.+..+|+.+|+++||+++|+++++||.+++++.. +.. .+..+..++..||++..+ .++.++.+|++++.+|..|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 45678999999999999999999999999998864 433 567788999999996444 468999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCC
Q 015474 151 AIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~ 170 (406)
.|++|....+|++++|..+.
T Consensus 181 ~~~~~~~~~vLvv~~e~~s~ 200 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTIL 200 (391)
T ss_pred HHHhCCCCeEEEEEEEcChh
Confidence 99999999999999998664
No 109
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.56 E-value=3e-14 Score=143.35 Aligned_cols=96 Identities=14% Similarity=0.009 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHHH
Q 015474 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 73 ~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~~ 151 (406)
.+..+|+.+|++++|+++|+++++||.|++++..+.. .+..+..++..+|++... ....++.+|++++.+|..|.+.
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~l 183 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH--IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDL 183 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC--CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999988765 367888999999996432 2456777999999999999999
Q ss_pred HHcCCCCEEEEEeecCCCC
Q 015474 152 IKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 152 I~sG~~d~vL~~G~E~ms~ 170 (406)
|++|.+..||++++|.+|.
T Consensus 184 i~~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 184 AENNRGARVLVVAAEITLL 202 (399)
T ss_pred HHhCCCCeEEEEEEecccc
Confidence 9999999999999999876
No 110
>PLN03173 chalcone synthase; Provisional
Probab=99.55 E-value=4.6e-14 Score=141.41 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
..+|+.+|+++||+++|++++|||.|++++..+.. .+..+..++..+|++..+ .++.++.+|+++..+|..|.+.|+
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999998877643 367888999999996434 356789999999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
++....||++++|..|.
T Consensus 180 ~~~~~~vLVV~~E~~S~ 196 (391)
T PLN03173 180 NNKGARVLVVCSEITAV 196 (391)
T ss_pred hCCCCeEEEEEEehhhh
Confidence 99999999999998774
No 111
>PLN03170 chalcone synthase; Provisional
Probab=99.55 E-value=1.9e-14 Score=144.70 Aligned_cols=94 Identities=12% Similarity=0.011 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
..+|+.+|+++||+++|++++|||.|++++..+.. .+..+..++..||++..+ .++.++.+|++++.+|..|.+.|+
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999988876533 477889999999996433 378999999999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
+|....||++++|..|.
T Consensus 184 ~~~~~~vLVV~~E~~S~ 200 (401)
T PLN03170 184 NNRGARVLVVCSEITAV 200 (401)
T ss_pred cCCCCeEEEEEEehhhh
Confidence 99999999999998775
No 112
>PLN03168 chalcone synthase; Provisional
Probab=99.55 E-value=7.9e-14 Score=139.79 Aligned_cols=95 Identities=17% Similarity=0.092 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~~I 152 (406)
...+|+.+|+++||+++|++++|||.|++++.++.. .+..+..++..||++... .++.++.+|++++.+|..|...|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999988743 477899999999996433 37999999999999999999999
Q ss_pred HcCCCCEEEEEeecCCCC
Q 015474 153 KAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 153 ~sG~~d~vL~~G~E~ms~ 170 (406)
++|....||++++|.+|.
T Consensus 178 ~~~~~~~VLVV~~E~~S~ 195 (389)
T PLN03168 178 ENNKGARVLAVASEVTAV 195 (389)
T ss_pred HhCCCCEEEEEEEehhhh
Confidence 999999999999998876
No 113
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.55 E-value=7.6e-14 Score=133.41 Aligned_cols=91 Identities=18% Similarity=0.280 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~ 151 (406)
+....+|+.+|+++||+++|++++|||.+++|+. .+ ....+..++..+|+ |.+.++.+|+|+..+|..|+..
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~l 118 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAML 118 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHH
Confidence 3567889999999999999999999999999873 22 13467788999998 5699999999999999999999
Q ss_pred HHcCCCCEEEEEeecCCCC
Q 015474 152 IKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 152 I~sG~~d~vL~~G~E~ms~ 170 (406)
|++|.+|.+|+++.|.++.
T Consensus 119 I~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 119 VDGGFADRVLAATSSHYAT 137 (327)
T ss_pred HhCCCCCEEEEEEecccch
Confidence 9999999999999888775
No 114
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.54 E-value=3.9e-14 Score=142.01 Aligned_cols=200 Identities=15% Similarity=0.039 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-ceEEEcCCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
..+|+.+|+++||+++|+++++||.|++++..+.. .+..+..++..+|++..+ .++.++.+|+++..+|..|.+.++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999988877643 467888999999996444 356789999999999999999999
Q ss_pred cCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 015474 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~ 233 (406)
+|....+|++++|..|..-..+
T Consensus 180 ~~~~~~vLVV~~E~~S~~~~~~---------------------------------------------------------- 201 (393)
T PLN03172 180 NNAGSRVLVVCSEITAVTFRGP---------------------------------------------------------- 201 (393)
T ss_pred cCCCCeEEEEEEehhhhhhccc----------------------------------------------------------
Confidence 9999999999999877400000
Q ss_pred CccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcC
Q 015474 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (406)
Q Consensus 234 ~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g 313 (406)
++ + +.+.+ -.++.++|||+|+||...+... .
T Consensus 202 ---------------------------~d--~---~~~~~---------------v~~~LFGDGAaAvVl~~~~~~~-~- 232 (393)
T PLN03172 202 ---------------------------SD--T---HLDSL---------------VGQALFGDGAAAVIIGADPDTK-I- 232 (393)
T ss_pred ---------------------------cc--c---cHHhh---------------hccchhcCceEEEEEecCCCCc-c-
Confidence 00 0 00110 1234488999999998643211 0
Q ss_pred CCceEEEEEEEEe---ecCC------CCCCC-------C-------HHHHHHHHHHHcCCCCCCccEEEccccchHHHHH
Q 015474 314 LPILGVFRTFAAV---GVDP------AIMGV-------G-------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (406)
Q Consensus 314 ~~~~a~i~g~~~~---~~~p------~~~~~-------~-------~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~ 370 (406)
.++.-+++++... ..+. ...|. - ....++++|++.|++..|||+|-+|.......-.
T Consensus 233 ~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~ 312 (393)
T PLN03172 233 ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQ 312 (393)
T ss_pred cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHH
Confidence 1122234444221 1100 00010 0 1256778999999999999999999999998889
Q ss_pred HHHHcCCCCCCCC
Q 015474 371 CRNKLGLDPEKIN 383 (406)
Q Consensus 371 ~~e~lGl~~~~vN 383 (406)
..+.|||+++++-
T Consensus 313 v~~~Lgl~~~~~~ 325 (393)
T PLN03172 313 VEIKLDLKEEKLR 325 (393)
T ss_pred HHHHcCCCHHHHH
Confidence 9999999987653
No 115
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.50 E-value=6.3e-13 Score=133.11 Aligned_cols=110 Identities=8% Similarity=0.058 Sum_probs=96.1
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
+.++.|.+++.+... ..+.+..+|+.+|++++|+++ ++++||.+++++..+... ....+..++..+|++..++
T Consensus 29 ~~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~ 101 (379)
T TIGR01835 29 EKFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCR 101 (379)
T ss_pred HHHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCce
Confidence 346678888887642 246778999999999999998 899999999999887754 5678899999999965688
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecC
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 167 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ 167 (406)
++.+..+|++|..||..|.+.|++|..+.+|++++|.
T Consensus 102 ~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~ 138 (379)
T TIGR01835 102 SFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI 138 (379)
T ss_pred EEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence 9999999999999999999999999999999999886
No 116
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.49 E-value=5.3e-13 Score=127.96 Aligned_cols=91 Identities=19% Similarity=0.329 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHH
Q 015474 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 72 ~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~ 151 (406)
+....+|+.+|+++||+++|++++|||.+++|+... ....+..++..+|+ |++.++.+|+|+..+|..|+..
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~----Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN----QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC----CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 456788999999999999999999999999997531 13467778888887 6999999999999999999999
Q ss_pred HHcCCCCEEEEEeecCCCC
Q 015474 152 IKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 152 I~sG~~d~vL~~G~E~ms~ 170 (406)
|++|.+|.+|+++.|.+++
T Consensus 125 I~SG~ad~VLVV~Ssh~s~ 143 (337)
T PRK08304 125 IDGGFADRVLAATSSHFAT 143 (337)
T ss_pred HhcCCCCEEEEEEcchhhh
Confidence 9999999999999998876
No 117
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.47 E-value=2.9e-12 Score=131.10 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc-CCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~CaSg~~Ai~~Aa~~I~ 153 (406)
.+.+...++.++|+++|++|+|||.+++.+ .+... .+..+.+++.++|++.++..++++ .+|++++.+|..|.+.|+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~c-S~~~p-~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVNC-SLFNP-TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-CCCCC-CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 466677788899999999999999999853 34432 578899999999997678899998 899999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
+|....+|++++|.+|.
T Consensus 266 ~~~~~~aLVVstE~~S~ 282 (521)
T PLN02854 266 ANPNSYAVVVSTENITL 282 (521)
T ss_pred hCCCCeEEEEEEeeeec
Confidence 99999999999999874
No 118
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.43 E-value=4e-12 Score=130.00 Aligned_cols=95 Identities=18% Similarity=0.217 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc-CCCchHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAI 152 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~CaSg~~Ai~~Aa~~I 152 (406)
...+++..|++++|+++|++|+|||.+++ ++.+... .+..+.+++.++|++.++..++++ .+|++|+.+|..|.+.|
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 46899999999999999999999999987 5555433 578899999999997678999999 69999999999999999
Q ss_pred HcCCCCEEEEEeecCCCC
Q 015474 153 KAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 153 ~sG~~d~vL~~G~E~ms~ 170 (406)
++|....+|++++|.+|.
T Consensus 249 ~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HcCCCCEEEEEEEecccc
Confidence 999999999999999886
No 119
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.40 E-value=2.4e-12 Score=130.50 Aligned_cols=111 Identities=15% Similarity=0.190 Sum_probs=92.1
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHH---HHcCCCCCCc
Q 015474 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA---FYAGFPETVP 130 (406)
Q Consensus 54 Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va---~~lGl~~~~~ 130 (406)
.+|.++..+.- .-.+.+..+|++.|++.+|+++|++|++||.|++++..+... .+..+..++ ..+|. .++.
T Consensus 36 ~~GI~~r~~av----a~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~-~~~~ 109 (459)
T PLN02577 36 TIGLGQDCMAF----CTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGN-TDIE 109 (459)
T ss_pred hhccceeEecc----CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCC-CCcE
Confidence 45666655431 124789999999999999999999999999999999988755 566676664 56787 4789
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCCC--CEEEEEeecCCCC
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLESMTV 170 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~~--d~vL~~G~E~ms~ 170 (406)
++.++.+|.++..||..|.+.|++|.. +.+||+|+|.++.
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc
Confidence 999999999999999999999999985 9999999997554
No 120
>PLN02932 3-ketoacyl-CoA synthase
Probab=99.40 E-value=4.5e-12 Score=128.91 Aligned_cols=94 Identities=14% Similarity=0.249 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc-CCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~CaSg~~Ai~~Aa~~I~ 153 (406)
.++|+.+|++++|+++|++|+|||.+++.+.++.. .+..+.+++.++|++..+..+.++ .+|++++.+|..|.+.++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~--~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNP--TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999999988763 478899999999997678999999 899999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
+|....+||+++|.+|.
T Consensus 226 ~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 226 VHRNTYALVVSTENITQ 242 (478)
T ss_pred cCCCCeEEEEEEeeccc
Confidence 99999999999999987
No 121
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.26 E-value=5.5e-11 Score=113.56 Aligned_cols=83 Identities=18% Similarity=0.255 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
...+|+.+|++.||+++|++++|||.+++|+.... ..++..++..+|+ |.+.++++|+|+..+|..|+..|+
T Consensus 53 AE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ----~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 53 AERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ----ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC----cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999987722 3455588889997 458999999999999999999999
Q ss_pred cCCCCEEEEEe
Q 015474 154 AGFYDIGIGAG 164 (406)
Q Consensus 154 sG~~d~vL~~G 164 (406)
+|.+|++|++-
T Consensus 125 SG~Ad~VLavt 135 (334)
T PRK12404 125 SGGAKYVLTGA 135 (334)
T ss_pred cCCCCEEEEEe
Confidence 99999999985
No 122
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.26 E-value=1.1e-10 Score=119.50 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc-CCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~CaSg~~Ai~~Aa~~I~ 153 (406)
.+.+...|++++|+++|++|+|||.+++.+. +... .+..+.+++.++|+..++..++++ .+|++++.+|..|.+.++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~-~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCC-CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 5788999999999999999999999988754 3332 577899999999996578999999 699999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
++....+||+++|.+|.
T Consensus 254 a~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 254 VHPNSYALVISMENITL 270 (511)
T ss_pred cCCCCeEEEEEEEeccc
Confidence 99999999999999884
No 123
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.26 E-value=2e-10 Score=111.89 Aligned_cols=210 Identities=19% Similarity=0.285 Sum_probs=154.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~ 150 (406)
.+.+...|+++|++.+|+++++||++|+.|++|+-..... .-..+..++..+|++.....+.+..+|-+|..||..|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999999877655 456788999999998888888999999999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 015474 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ 230 (406)
.|.+|..+-+||+|.+.--..|.
T Consensus 126 ~v~s~~~~~~LvI~sD~a~~~~~--------------------------------------------------------- 148 (377)
T COG3425 126 WVESGMISYGLVIGADTAQYAPG--------------------------------------------------------- 148 (377)
T ss_pred HHHcCCccceEEEeehhhccCCC---------------------------------------------------------
Confidence 99999999999999875322110
Q ss_pred cCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHH
Q 015474 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (406)
Q Consensus 231 ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~ 310 (406)
... . .| .++||+|+|+..-.
T Consensus 149 -------------------------------------~~~------E--------~t------~GAGavA~lIg~n~--- 168 (377)
T COG3425 149 -------------------------------------DAL------E--------YT------AGAGAVAFLIGKNP--- 168 (377)
T ss_pred -------------------------------------ccc------C--------cc------CCCceEEEEEccCC---
Confidence 000 0 11 56899999988621
Q ss_pred hcCCCceEEEEEEEEeec-CCCCC-----------C-C-------CHHHHHHHHHHHcCCCCCCccEEEccccchHHHHH
Q 015474 311 RKGLPILGVFRTFAAVGV-DPAIM-----------G-V-------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (406)
Q Consensus 311 ~~g~~~~a~i~g~~~~~~-~p~~~-----------~-~-------~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~ 370 (406)
.+.+.+-+.+.... .|+.+ + . ....|++..+++.|++++|.|++-+|.+|+-+..-
T Consensus 169 ----~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 169 ----PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred ----CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHH
Confidence 12333333333222 12211 0 0 11368889999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcc-ccCCccchhHHHH
Q 015474 371 CRNKLGLDPEKINVNGGAL-AIGHPLGTTGNCC 402 (406)
Q Consensus 371 ~~e~lGl~~~~vN~~GG~~-a~Ghp~GatG~~~ 402 (406)
.++.||+..++|-++==.. ..|....++....
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~ 277 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLG 277 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHH
Confidence 9999999865544321111 1455555554433
No 124
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.17 E-value=8e-10 Score=112.15 Aligned_cols=108 Identities=16% Similarity=0.130 Sum_probs=90.6
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHH---cCCCCCCc
Q 015474 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY---AGFPETVP 130 (406)
Q Consensus 54 Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~---lGl~~~~~ 130 (406)
.+|.++..+.- ...+.+..+|+..|++.+|++++++|++||.|++++..+... .+..+..++.. +|+ .++.
T Consensus 33 ~~GI~~rr~av----~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~-~~~~ 106 (454)
T TIGR01833 33 TIGLGQTKMGF----CTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TDVE 106 (454)
T ss_pred eechhheeccc----CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCC-CCce
Confidence 46776665321 124789999999999999999999999999999999888765 56677777764 456 4788
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCC--CCEEEEEeecC
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGF--YDIGIGAGLES 167 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~--~d~vL~~G~E~ 167 (406)
++.++.+|.++..||..|.+.|++|. .+.+||++.|.
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 99999999999999999999999997 49999999987
No 125
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.16 E-value=2.4e-10 Score=107.90 Aligned_cols=94 Identities=23% Similarity=0.373 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC-----eEEEEeecCCC-------------C----------CCccHHHHHHHHcCCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVG-----DIVVGTVLAPG-------------S----------QRASECRMAAFYAGFP 126 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID-----~v~~g~~~~~~-------------~----------~~~~~a~~va~~lGl~ 126 (406)
...|+..++.+||+|+|+++.+++ ++++|+...+. . .....+..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 568899999999999999885443 37777766621 0 011246688999999
Q ss_pred CCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCC
Q 015474 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 127 ~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~ 170 (406)
+.|.++++++|+||+.||..|++.|++|++|++||+|+|....
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 208 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS 208 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred -CCccccccccccccccccchhcccccccccccccccccccccc
Confidence 6899999999999999999999999999999999999995443
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.11 E-value=2e-10 Score=122.40 Aligned_cols=227 Identities=23% Similarity=0.294 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCe----EEEEeecCCCC----C------C--------ccHHHHHHHHcCCCCCCceE
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS----Q------R--------ASECRMAAFYAGFPETVPVR 132 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~----v~~g~~~~~~~----~------~--------~~~a~~va~~lGl~~~~~~~ 132 (406)
-..|+.++..+|+-||||.|.++.+ +++|...+... + | .+.+..++..+.+ .+|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 4689999999999999999988864 66666554432 0 0 1123344445566 68999
Q ss_pred EEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHH
Q 015474 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (406)
Q Consensus 133 ~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre 212 (406)
.++++|+|.+.|+..|.+.|++|+||.+||.|+...-... +.+.. .+.
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt-----------------------~slQF----lRL----- 212 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPT-----------------------TSLQF----LRL----- 212 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccc-----------------------hhhHH----HHh-----
Confidence 9999999999999999999999999999999987654410 11000 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCC
Q 015474 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (406)
Q Consensus 213 ~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~ 292 (406)
| .++.|..+|. ||. .+|..
T Consensus 213 -------------------g------------------------mls~dGsCka-------------FDe-----agnGY 231 (2376)
T KOG1202|consen 213 -------------------G------------------------MLSPDGSCKA-------------FDE-----AGNGY 231 (2376)
T ss_pred -------------------c------------------------CcCCCCcccc-------------hhc-----cCCce
Confidence 0 1233333432 543 24555
Q ss_pred CCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCCC----CC--CCCHHHHHHHHHHHcCCCCCCccEEEccccch-
Q 015474 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA----IM--GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA- 365 (406)
Q Consensus 293 ~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~----~~--~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa- 365 (406)
-.+||.++++|.+...|++.= +.|+....+...-. -+ |.-....++..|+.+||.|+++-|+|.|..-+
T Consensus 232 ~Rseg~~avllqrk~~ArRvY----AtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 232 CRSEGVVAVLLQRKSLARRVY----ATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTK 307 (2376)
T ss_pred eecCceEEEEEehhHHHHHHH----HHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCC
Confidence 578999999999999998753 34443333221000 11 22234789999999999999999999994433
Q ss_pred ---------HHHHHHHHHcCCCCCCCCCCCCccc-cCCccchhHHHHHhh
Q 015474 366 ---------SQFVYCRNKLGLDPEKINVNGGALA-IGHPLGTTGNCCSNC 405 (406)
Q Consensus 366 ---------~~~l~~~e~lGl~~~~vN~~GG~~a-~Ghp~GatG~~~v~~ 405 (406)
+...+|... -.|+ .-|..++ .||+--|||+..++.
T Consensus 308 VGDpQEaN~it~~fC~~R----t~pL-LIGSvKSNMGHaEPASGv~alaK 352 (2376)
T KOG1202|consen 308 VGDPQEANGITRFFCATR----TTPL-LIGSVKSNMGHAEPASGVCALAK 352 (2376)
T ss_pred CCChHHhhhHHHHHhhcC----CCce-EeeeccccCCCCCccchHHHHHH
Confidence 333333311 1122 2344444 899999999877654
No 127
>PLN00415 3-ketoacyl-CoA synthase
Probab=99.05 E-value=2e-09 Score=108.67 Aligned_cols=96 Identities=22% Similarity=0.255 Sum_probs=81.2
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcC-CCchHHHHHHHHHH
Q 015474 73 TYPDDLLAP-VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAA 150 (406)
Q Consensus 73 ~~~~~L~~~-A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~CaSg~~Ai~~Aa~ 150 (406)
....+|+.. |++++|+++|++|+|||.+++. ..+... .+..+..++.++|++.++..+.++. +|++|..+|..|.+
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~-~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNP-NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCC-CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 345566655 7788999999999999998864 334322 4777889999999977889999997 99999999999999
Q ss_pred HHHcCCCCEEEEEeecCCCC
Q 015474 151 AIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ms~ 170 (406)
.++++....+|++++|..|.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999886
No 128
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=2.5e-08 Score=93.81 Aligned_cols=196 Identities=18% Similarity=0.172 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE-EcCCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-VNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~-v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
...|.+++.++||+++++.|+|||.+++.++++-.. +.+-..+...|||+..+.-+- ..-+|+.|..++..|.+..+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~--Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLAT--PSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccC--CChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 467899999999999999999999999998876554 555667889999965444333 36799999999999999999
Q ss_pred cCCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccCcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 015474 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~ 233 (406)
..-...+|++.+|-=|-. + .
T Consensus 154 a~P~~~vlvV~vELCSLt-~-----------------------------------------------------------~ 173 (356)
T COG3424 154 AAPDANVLVVCVELCSLT-Y-----------------------------------------------------------V 173 (356)
T ss_pred hCccceEEEEEeeeeeee-e-----------------------------------------------------------e
Confidence 999999999999975530 0 0
Q ss_pred CccccceeeeeccCCCCCCCCCeeeeccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhc-
Q 015474 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK- 312 (406)
Q Consensus 234 ~~~ei~p~~~~~~~~~~~~~~~~~~~~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~- 312 (406)
+.+. . . + ..-..+.++||+||+|++-...++..
T Consensus 174 ~~d~----------t----------------~----------s----------~lVgtaLF~DG~AA~vv~gd~~~~~~~ 207 (356)
T COG3424 174 FADD----------T----------------K----------S----------NLVGTALFGDGAAAVVVSGDRRAEGKR 207 (356)
T ss_pred cCCC----------C----------------c----------c----------cceeeeeecCCeeEEEEeccccccccC
Confidence 0000 0 0 0 00123458899999999874443322
Q ss_pred CCCceEEEEEEEEeec--CCCCCCC---------------------CHHHHHHHHHHHcCCCCCCccEEEccccchHHHH
Q 015474 313 GLPILGVFRTFAAVGV--DPAIMGV---------------------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (406)
Q Consensus 313 g~~~~a~i~g~~~~~~--~p~~~~~---------------------~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l 369 (406)
...+ .|++....=. .-+.|+. .....+...|..-||+.+||+.|-+|---.-..-
T Consensus 208 ~~~p--~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVid 285 (356)
T COG3424 208 PLRP--DILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVID 285 (356)
T ss_pred CCCc--eecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHH
Confidence 1222 2443322100 0011211 1236888999999999999999999988877777
Q ss_pred HHHHHcCCCCC
Q 015474 370 YCRNKLGLDPE 380 (406)
Q Consensus 370 ~~~e~lGl~~~ 380 (406)
...+.|||+++
T Consensus 286 a~~~sLgls~e 296 (356)
T COG3424 286 AYEESLGLSPE 296 (356)
T ss_pred HHHHhcCCCHH
Confidence 77888999874
No 129
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.65 E-value=2.5e-07 Score=87.77 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE-cCCCchHHHHHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v-~~~CaSg~~Ai~~Aa~~I~ 153 (406)
.+.++..+++++|+++|++|+|||.+++.+..... .+..+.++..++|+...+..+++ .-||++|+-+|..|.+.++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 46688899999999999999999999998876544 37889999999999777777775 5799999999999999999
Q ss_pred cCCCCEEEEEeecCCCC
Q 015474 154 AGFYDIGIGAGLESMTV 170 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~ 170 (406)
.-.-..+|++.+|..|.
T Consensus 161 ~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 161 AHPNSYALVVSTENISA 177 (290)
T ss_pred hCCCcEEEEEEEeeccc
Confidence 99999999999999886
No 130
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.45 E-value=2.5e-06 Score=80.69 Aligned_cols=108 Identities=18% Similarity=0.279 Sum_probs=76.3
Q ss_pred CceEEEEeee--------cccccCCCCCCCCCC---------HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCC
Q 015474 50 DDVVIVAAYR--------TALCKSKRGGFKDTY---------PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112 (406)
Q Consensus 50 ~~v~Ivg~~~--------tp~~r~~~g~~~~~~---------~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~ 112 (406)
++++|++.+. -|++..|+-.+.|.. ...|..+|++.+|+++++.++|||.++.|--+..
T Consensus 9 ~~p~I~~~asvvGpkEg~GPL~~~FD~~~~D~~~Ge~swEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ---- 84 (329)
T PF07451_consen 9 NPPYIISTASVVGPKEGEGPLGDYFDKIYEDDYFGEKSWEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQ---- 84 (329)
T ss_dssp CEEEEEEEEEEE-HHHHCSTTGGGSSEE-SSTTTTSSSHHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCC----
T ss_pred CCCEEEEEEEEECCccccCCChhhCCccccccccCcccHHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhh----
Confidence 3456665543 477766643333322 4678899999999999999999999999876533
Q ss_pred ccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEee
Q 015474 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165 (406)
Q Consensus 113 ~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~ 165 (406)
...+...+..+++ |.+-+-.+|++...+|..|+..|..|-++.+|++-.
T Consensus 85 ~i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tS 133 (329)
T PF07451_consen 85 IISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATS 133 (329)
T ss_dssp CCHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEE
T ss_pred hHHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEec
Confidence 2456667777777 688889999999999999999999999999998753
No 131
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=98.19 E-value=9.7e-06 Score=74.89 Aligned_cols=95 Identities=12% Similarity=0.107 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE-EcCCCchHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-VNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~-v~~~CaSg~~Ai~~Aa~~I 152 (406)
...+|+.+|+++||+++|++++||+.+++.++++-. .+..-..+...+||+..+.=+. ..-||..|..+|..|.+..
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~--~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA--APGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE--CS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC--CCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 457899999999999999999999999998887654 3666778899999965554443 4689999999999999999
Q ss_pred HcCCCCEEEEEeecCCCC
Q 015474 153 KAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 153 ~sG~~d~vL~~G~E~ms~ 170 (406)
++..-..||++.+|..|.
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999899999999998774
No 132
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.16 E-value=4.2e-07 Score=91.46 Aligned_cols=110 Identities=21% Similarity=0.160 Sum_probs=82.9
Q ss_pred ccCCCCCCCchhhhhhcCCcccCCCCcccCCCCCCCCcceEEEecCHHHHHhcCCCceEEEEEEEEeecCC---------
Q 015474 260 VDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--------- 330 (406)
Q Consensus 260 ~de~~r~~~t~e~l~~~~p~~~~~g~lt~~~~~~~~DGAaAvvL~s~~~A~~~g~~~~a~i~g~~~~~~~p--------- 330 (406)
++.++++++|.+++++++++.|| +++.|||+..||++++++++++.+ + .++.+.+..-.+.
T Consensus 189 p~a~~~~eI~~~~v~~~~~~~dp---~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~~ 258 (392)
T COG0183 189 PKAGFFDEITPEDVLNSPVVADP---LRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMSE 258 (392)
T ss_pred HhcCCCCceeeEEecCCceecCC---cccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhhH
Confidence 34556678889999888777766 888999999999999999997642 1 2344433211110
Q ss_pred ---CCCCCCHHHHHHHHHHHcCCCCC--CccEEEccccchHHHHHHHHHcCCCCC
Q 015474 331 ---AIMGVGPAVAIPAAVKSAGLQLD--DIDLFEINEAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 331 ---~~~~~~~~~A~~~al~~AGl~~~--DID~~e~hd~fa~~~l~~~e~lGl~~~ 380 (406)
..++ ....|..++|+.+|++|. ++|++++||+|+..++..+|+|||++.
T Consensus 259 ~~~~~~~-l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 259 SKAKELG-LAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred HHHHHCC-CcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 1111 223577899999999998 999999999999999999999999973
No 133
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.10 E-value=7.6e-06 Score=72.11 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC--CCCceEEEcCCCchHHHHHHHH
Q 015474 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (406)
Q Consensus 71 ~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~--~~~~~~~v~~~CaSg~~Ai~~A 148 (406)
.+.+...|++.|++.+|++.++++++|+.+++|+-..-.. .-..+..+...+|++ ..+..+.+..+|-+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~-sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK-SKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS-SS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc-cccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 4678899999999999999999999999999998765544 456788899999993 3456788899999999999999
Q ss_pred HHHHHcCCCC--EEEEEeecC
Q 015474 149 AAAIKAGFYD--IGIGAGLES 167 (406)
Q Consensus 149 a~~I~sG~~d--~vL~~G~E~ 167 (406)
++.|+++..+ .+||++.|.
T Consensus 128 ~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 128 VNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp HHHHCSTTSTTEEEEEEEEEE
T ss_pred HHHHhcCCCCCCeEEEEeccc
Confidence 9999999765 899999885
No 134
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=97.78 E-value=5.1e-05 Score=63.34 Aligned_cols=88 Identities=22% Similarity=0.251 Sum_probs=52.4
Q ss_pred eEEEEEEEEeecC---CCCC---CCCHHHHHHHHHHHcCCCCCCccEEEccccchHH----HHHHH-HHcCCCC--CCCC
Q 015474 317 LGVFRTFAAVGVD---PAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCR-NKLGLDP--EKIN 383 (406)
Q Consensus 317 ~a~i~g~~~~~~~---p~~~---~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~----~l~~~-e~lGl~~--~~vN 383 (406)
++.|.|++..... .... +.+...+++++|+++|++++|||++|.|..-+.. +...+ +.++-.. .++-
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 4678888887643 1111 2245689999999999999999999999776653 33333 3344332 2333
Q ss_pred CCCCccccCCccchhHHHHHh
Q 015474 384 VNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 384 ~~GG~~a~Ghp~GatG~~~v~ 404 (406)
++.=+..+||+.+++|+..++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~ 101 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLA 101 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHH
T ss_pred eeccccccccccccchHHHHH
Confidence 333344599999999998875
No 135
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.12 E-value=0.00066 Score=52.42 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=35.1
Q ss_pred EEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCC
Q 015474 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (406)
Q Consensus 132 ~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~ 170 (406)
++++.+|++++.+|..|...|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 578999999999999999999999999999999999876
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=96.15 E-value=0.0038 Score=49.08 Aligned_cols=58 Identities=26% Similarity=0.275 Sum_probs=42.5
Q ss_pred HHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCCCCCCCCCccccCCccchhHHHHHh
Q 015474 345 VKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGNCCSN 404 (406)
Q Consensus 345 l~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~~vN~~GG~~a~Ghp~GatG~~~v~ 404 (406)
|+++|++++|||+|-+|+..........+.+|++++++..+- --+||...|+=...+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~--~~~Gn~~sa~~~~~L~ 58 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNL--AEYGNTGSASIPINLA 58 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-TH--HHH-B-GGGHHHHHHH
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHH--hccCcchhhhHHHHHH
Confidence 689999999999999999999988889999999998775543 4589998888665543
No 137
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=91.00 E-value=2.2 Score=39.44 Aligned_cols=92 Identities=12% Similarity=0.027 Sum_probs=69.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCC----------C-------------ccHHHHHHHHcCCCCCCc
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ----------R-------------ASECRMAAFYAGFPETVP 130 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~----------~-------------~~~a~~va~~lGl~~~~~ 130 (406)
....|+.+++.+++.+. .++|.+|+++..++... + ...+..++...|. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 34667777777776442 57789999987766430 0 0134566677776 678
Q ss_pred eEEEcCCCchHHHHHHHHHHHHHcCCCCEEEEEeecCCCCCC
Q 015474 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172 (406)
Q Consensus 131 ~~~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~E~ms~~~ 172 (406)
.+++..+-.|...++..|+..++.| .+-||++.+|.....+
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~ 147 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEP 147 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChh
Confidence 9999999999999999999999999 8999999998766533
No 138
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=90.52 E-value=1.5 Score=45.67 Aligned_cols=107 Identities=12% Similarity=0.042 Sum_probs=67.7
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC-
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET- 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~- 128 (406)
+.|+|.|.+...-...+ ....+.........+++++++.+|++++|||.+-+-..+ +.......+.|||+..
T Consensus 266 ~~V~i~g~a~~~~~~~~-~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF------~~~~~~~~E~LGl~~~g 338 (498)
T PRK08257 266 RWVYLHGGADAHDPYDI-LERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCF------PSAVQVAARELGLDLDD 338 (498)
T ss_pred ceEEEEEEEEeeCcccc-ccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCC------HHHHHHHHHHcCcCCCC
Confidence 45888888775322111 111233333344568899999999999999988763321 2333455578898533
Q ss_pred -CceEEEc--------CCCchHHHHHHHHHHHHHcCCCCEEEEEe
Q 015474 129 -VPVRTVN--------RQCSSGLQAVADVAAAIKAGFYDIGIGAG 164 (406)
Q Consensus 129 -~~~~~v~--------~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G 164 (406)
.|+ +++ ...++|+..|.+++..++....+++|+.+
T Consensus 339 ~~pv-N~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~ 382 (498)
T PRK08257 339 PRPL-TVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTA 382 (498)
T ss_pred CCCc-CCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEEC
Confidence 232 222 23456788889999999976788888875
No 139
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=88.19 E-value=0.99 Score=37.31 Aligned_cols=101 Identities=21% Similarity=0.253 Sum_probs=55.9
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC---CCC
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP---ETV 129 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~---~~~ 129 (406)
+|.|.+.+-=+. ........+. +-..++++++|+++|++|++||.|..-..-.... .......+...++-. ...
T Consensus 3 ~i~g~~~~~dg~-~~~~~~~p~~-~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~-D~~E~~ai~~~~~~~~~~~~~ 79 (119)
T PF02801_consen 3 VIRGYGVNSDGA-RSSSLTAPNG-AALARAIRRALADAGISPEDIDYIEAHGTGTPLG-DAAEAEAIARVFGDSARQQPV 79 (119)
T ss_dssp EEEEEEEEE-SS-STSSSSSTTH-HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHH-HHHHHHHHHHHHGGGGGTSTS
T ss_pred EEEEEEEECCCC-CCCCCcCcCH-HHHHHHHHHHHhhhccccccceeeeeeccccccc-hhhhhhhhhhhhccccccccc
Confidence 467776655441 1112222333 3447789999999999999999887632211111 123344444444431 123
Q ss_pred ceEEE-----cCCCchHHHHHHHHHHHHHcCC
Q 015474 130 PVRTV-----NRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 130 ~~~~v-----~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
++..+ ...++||+..+..+...++.|.
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCC
Confidence 44432 3577899999999999888774
No 140
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=87.84 E-value=0.74 Score=35.87 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=44.4
Q ss_pred HHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE----EcCCCchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 87 IEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 87 L~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~----v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
|+++|++++|||.++.-+.. ......++..+|+|......+ -|.+|++-..++..+...=+-..-|.+|+
T Consensus 1 L~~~g~~~~did~~i~hq~~------~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~ 74 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS------KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLL 74 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS------HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC------HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEE
Confidence 68999999999999985432 334556888999975433222 25666666767766555212224578888
Q ss_pred EeecC
Q 015474 163 AGLES 167 (406)
Q Consensus 163 ~G~E~ 167 (406)
+++-.
T Consensus 75 ~~~G~ 79 (90)
T PF08541_consen 75 VGFGA 79 (90)
T ss_dssp EEEET
T ss_pred EEEEh
Confidence 87644
No 141
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=87.72 E-value=1.5 Score=43.41 Aligned_cols=85 Identities=18% Similarity=0.131 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE------EcCCCchHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT------VNRQCSSGLQAVADV 148 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~------v~~~CaSg~~Ai~~A 148 (406)
....+..+++++|+++|++++|||.+++=+.. ...-..+...+|+|......+ =|.+++|-..+|..+
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~------~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~ 279 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN------GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV 279 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC------hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence 34455688889999999999999998883221 224455788999974322221 255566767777777
Q ss_pred HHHHHcCCCCEEEEEeecC
Q 015474 149 AAAIKAGFYDIGIGAGLES 167 (406)
Q Consensus 149 a~~I~sG~~d~vL~~G~E~ 167 (406)
...++.| |.+|.+|+=+
T Consensus 280 ~~~~~~G--d~vll~~~G~ 296 (345)
T TIGR00748 280 LDIAEPG--DRILAVSYGS 296 (345)
T ss_pred HHhcCCC--CEEEEEEecC
Confidence 6666666 5787777544
No 142
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=87.43 E-value=5.8 Score=38.45 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCC---CC-CCceEEEcCCCchHHHHHHHHHHH
Q 015474 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF---PE-TVPVRTVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl---~~-~~~~~~v~~~CaSg~~Ai~~Aa~~ 151 (406)
.+-...+++++|+++|++++|||.++.-....... ............+. +. ......=|..++|+...+..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG-DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC-CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 45566789999999999999999988855433322 11122222222232 00 111122456677888888888888
Q ss_pred HHcC
Q 015474 152 IKAG 155 (406)
Q Consensus 152 I~sG 155 (406)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 8877
No 143
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.44 E-value=3 Score=41.78 Aligned_cols=81 Identities=15% Similarity=0.035 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHc-----CCCCCCceEEE----cCCCchHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA-----GFPETVPVRTV----NRQCSSGLQAVADVA 149 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~l-----Gl~~~~~~~~v----~~~CaSg~~Ai~~Aa 149 (406)
...+++++|+++|+.++|||.++.=+.. ...-..++..+ |+|...-..++ |.+|+|-..++..+.
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~n------~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYSS------EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCccc------HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 3667788999999999999998873321 22344556655 88644333344 455555556665553
Q ss_pred HHHHcCC---CCEEEEEeecCC
Q 015474 150 AAIKAGF---YDIGIGAGLESM 168 (406)
Q Consensus 150 ~~I~sG~---~d~vL~~G~E~m 168 (406)
+.|. -|.++..+.|+-
T Consensus 348 ---~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 348 ---NSGRLKPGQKILCFVPESG 366 (378)
T ss_pred ---HcCCCCCCCEEEEEEeccc
Confidence 3343 378888877763
No 144
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=86.28 E-value=4.6 Score=40.69 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=61.5
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
..++|.|.+.+-=+.+. ...+.. ..-..+++++||+++|++++|||.+.. |+..+. . .....+.+...+|- .
T Consensus 236 ~~~~I~g~g~~~d~~~~--~~~~~~-~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~-~-D~~E~~al~~~f~~--~ 308 (392)
T PRK09185 236 AAVALLGVGESSDAHHM--SAPHPE-GLGAILAMQQALADAGLAPADIGYINLHGTATPL-N-DAMESRAVAAVFGD--G 308 (392)
T ss_pred CcEEEEEEEEeCCCCCC--CCCCCC-HHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcC-C-CHHHHHHHHHHhCC--C
Confidence 35788888775333221 111222 223357899999999999999998765 322221 1 23445556666653 2
Q ss_pred CceE-----EEcCCCchHHHHHHHHHHHHHcCC
Q 015474 129 VPVR-----TVNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 129 ~~~~-----~v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
.|+. .=...+++|...+..++..++.|.
T Consensus 309 ~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 309 VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred CceeCCCcccccChhhcchHHHHHHHHHHhcCC
Confidence 3332 334677888888888888888774
No 145
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=85.29 E-value=9 Score=35.46 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHH-HHcCC---C-CCCceEEEcCCCchHHHHHHHHH
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA-FYAGF---P-ETVPVRTVNRQCSSGLQAVADVA 149 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va-~~lGl---~-~~~~~~~v~~~CaSg~~Ai~~Aa 149 (406)
..+...++++++|+++|++++|||.++.-....... ......+- ...+. + .......=+..++|+...+..+.
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~ 220 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIG--DAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELL 220 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccc--cHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHH
Confidence 345677889999999999999999988744332221 11111111 11111 0 01112224667788899999998
Q ss_pred HHHHcC-------CCCEEEEEee
Q 015474 150 AAIKAG-------FYDIGIGAGL 165 (406)
Q Consensus 150 ~~I~sG-------~~d~vL~~G~ 165 (406)
...+.+ ..+.+++.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~~~ 243 (254)
T cd00327 221 LMLEHEFIPPTPREPRTVLLLGF 243 (254)
T ss_pred HHHhCCCcCCCCCCcCEEEEeeE
Confidence 888876 6678777764
No 146
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.26 E-value=0.9 Score=43.70 Aligned_cols=64 Identities=25% Similarity=0.329 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc----hHHHHHHHHHcCCCCC--CCCCCCCccccCCccchhHHHHHhh
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGNCCSNC 405 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f----a~~~l~~~e~lGl~~~--~vN~~GG~~a~Ghp~GatG~~~v~~ 405 (406)
+.+.+++|+.+++.++|||.+-+-.+. ++.....+.+|||.|. ++.++| +|=..||+|++...+
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~ 150 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARD 150 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHH
Confidence 479999999999999999999876443 2345688899999985 566554 677888999877643
No 147
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=84.86 E-value=8 Score=38.50 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=62.3
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
..++|.|.+...-.... ....+.....-...+++++|+++|++++|||.+-+-..+ ..........+||....
T Consensus 225 ~~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F------~~~~l~~~e~lGl~~~g 297 (375)
T cd00829 225 RPVWILGVGAASDTPSL-SERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCF------TIAELLALEDLGFCEKG 297 (375)
T ss_pred CCeEEEEEEEecCCccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcC------hHHHHHHHHHcCCCCCC
Confidence 45889998876443211 111111123445679999999999999999987663221 22333445677774322
Q ss_pred c----------------eEEEc--------CCCchHHHHHHHHHHHHHcC-------CCCEEEEEe
Q 015474 130 P----------------VRTVN--------RQCSSGLQAVADVAAAIKAG-------FYDIGIGAG 164 (406)
Q Consensus 130 ~----------------~~~v~--------~~CaSg~~Ai~~Aa~~I~sG-------~~d~vL~~G 164 (406)
. -++++ ...++|+.-+.+++..++.. .++++|+.+
T Consensus 298 ~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~~l~~~ 363 (375)
T cd00829 298 EGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHN 363 (375)
T ss_pred chHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccEEEEec
Confidence 2 12222 22345777777888888643 255666554
No 148
>PRK06158 thiolase; Provisional
Probab=84.62 E-value=3 Score=41.94 Aligned_cols=64 Identities=23% Similarity=0.197 Sum_probs=41.2
Q ss_pred eEEEEEEEEeecCCCCCCCC----HHHHHHHHHHHcCCCCCCccEEEccccch-HHHHHHHHHcCCCCCC
Q 015474 317 LGVFRTFAAVGVDPAIMGVG----PAVAIPAAVKSAGLQLDDIDLFEINEAFA-SQFVYCRNKLGLDPEK 381 (406)
Q Consensus 317 ~a~i~g~~~~~~~p~~~~~~----~~~A~~~al~~AGl~~~DID~~e~hd~fa-~~~l~~~e~lGl~~~~ 381 (406)
...|+|.+.....+. .+.. ..+|+++||+.+||+++|||.+-+...+. .......+.||+.+.+
T Consensus 9 ~vaIvG~g~t~~~~~-~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~ 77 (384)
T PRK06158 9 RTAIVGAATAGLGEA-PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRF 77 (384)
T ss_pred CEEEEEeeeccceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCee
Confidence 346888877543221 1122 24799999999999999999886533211 1123466889997654
No 149
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=84.33 E-value=1.1 Score=43.89 Aligned_cols=42 Identities=33% Similarity=0.502 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEc-----cccchHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEI-----NEAFASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~-----hd~fa~~~l~~~e~lGl~~ 379 (406)
..|+++||++||++++|||++-+ ...|+.......+.||+..
T Consensus 57 ~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~ 103 (323)
T COG0332 57 VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGG 103 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCC
Confidence 47999999999999999999976 3567888888999999875
No 150
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=83.43 E-value=9.4 Score=38.38 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=62.3
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC-
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET- 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~- 128 (406)
..++|.|.+.+...... ....++....-...+++++|+++|++++|||.+-+-... ........+.+||...
T Consensus 232 ~~v~I~g~g~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~f------t~~~~~~~e~lgl~~~G 304 (389)
T PRK06064 232 TPVWIKASGQASDTIAL-HDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCF------TIAEILAYEDLGFAKKG 304 (389)
T ss_pred CCeEEEEEEEecCcccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCC------cHHHHHHHHHcCCCCCC
Confidence 45789999876443211 111122122334578899999999999999988662211 1223345566776321
Q ss_pred ----------------CceEE-------EcCCCchHHHHHHHHHHHHHcCC---------CCEEEEEe
Q 015474 129 ----------------VPVRT-------VNRQCSSGLQAVADVAAAIKAGF---------YDIGIGAG 164 (406)
Q Consensus 129 ----------------~~~~~-------v~~~CaSg~~Ai~~Aa~~I~sG~---------~d~vL~~G 164 (406)
.|+.+ -+...++|+.-+.+++..++-.. ++++|+.|
T Consensus 305 ~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv~~a~~~l~~~ 372 (389)
T PRK06064 305 EGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHN 372 (389)
T ss_pred chHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCccCCCccEEEEec
Confidence 12111 12334578888888888888432 46666655
No 151
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.82 E-value=4 Score=39.84 Aligned_cols=81 Identities=14% Similarity=0.066 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHH-HHHHHHHHcCC-
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV-ADVAAAIKAGF- 156 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai-~~Aa~~I~sG~- 156 (406)
...+++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++.+-+.++...+ ..-...+++|.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~------~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~ 305 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQA------SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKV 305 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCC
Confidence 457888999999999999999887332 2334567888999975432223333232332222 22223445554
Q ss_pred --CCEEEEEee
Q 015474 157 --YDIGIGAGL 165 (406)
Q Consensus 157 --~d~vL~~G~ 165 (406)
-|.+|.+++
T Consensus 306 ~~Gd~vll~~~ 316 (329)
T PRK07204 306 QRGNKILLLGT 316 (329)
T ss_pred CCCCEEEEEEE
Confidence 377777764
No 152
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=82.75 E-value=3.9 Score=41.41 Aligned_cols=78 Identities=13% Similarity=-0.000 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC-CCceEEEcCCCchHHHHHHHHHHHHHcCC
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~-~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
-..++++.||++||+ ++|||.|..--...... .....+.+...++.|. .+..+.=...+++|..-+..+...|+.|.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~-D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~ 358 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPA-TAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGA 358 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc-cHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCc
Confidence 457799999999999 89999977532211111 2445666666667531 23333445667788888888888888885
Q ss_pred C
Q 015474 157 Y 157 (406)
Q Consensus 157 ~ 157 (406)
+
T Consensus 359 v 359 (398)
T PRK06519 359 L 359 (398)
T ss_pred c
Confidence 3
No 153
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=82.04 E-value=4.1 Score=39.70 Aligned_cols=84 Identities=11% Similarity=0.065 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHH-HHHHHcC
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV-AAAIKAG 155 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~A-a~~I~sG 155 (406)
+...++++++|+++|++++|||.+++=+. ....-..+...+|+|......++..-+.++...+-.+ ...++.|
T Consensus 227 ~~~~~~~~~~L~~~gl~~~did~~~~h~~------~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~ 300 (326)
T PRK05963 227 RMMSGASQNVLASAAMTPQDIDRFFPHQA------NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQ 300 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhC
Confidence 34456778899999999999999888221 2345567788999975443333333333333333222 2334444
Q ss_pred C---CCEEEEEeec
Q 015474 156 F---YDIGIGAGLE 166 (406)
Q Consensus 156 ~---~d~vL~~G~E 166 (406)
. -|.+|.+++-
T Consensus 301 ~~~~Gd~vll~~~G 314 (326)
T PRK05963 301 PLREGERLLFAAAG 314 (326)
T ss_pred CCCCCCEEEEEEEe
Confidence 3 3788887753
No 154
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=81.84 E-value=8.9 Score=38.76 Aligned_cols=96 Identities=18% Similarity=0.130 Sum_probs=58.0
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~ 132 (406)
.|.|.+.+--+... ... .+=...++++||+++|+++++||.|..-..-.... .......+...+|- ...|+.
T Consensus 252 ~i~g~~~~~d~~~~-----~~~-~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~-~~~pv~ 323 (399)
T cd00832 252 EIAGYAATFDPPPG-----SGR-PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP-RGVPVT 323 (399)
T ss_pred EEEeEEEcCCCCCC-----CCC-HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC-CCCcee
Confidence 57777765443311 112 44456789999999999999999876532111111 24455556666664 233443
Q ss_pred E-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 133 T-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 133 ~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
. =...+++|...+..+..+++.|.
T Consensus 324 s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ 352 (399)
T cd00832 324 APKTMTGRLYAGGAPLDVATALLALRDGV 352 (399)
T ss_pred CCCchhcchHHHHHHHHHHHHHHHHhCCC
Confidence 2 23446677777777777888765
No 155
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=81.62 E-value=6.9 Score=39.33 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=58.7
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC-CCC
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETV 129 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~-~~~ 129 (406)
++|.|.+.+.-+.... . .. ....-...++++||+++|++++|||.+.. ++..+. . .......+...+|-. ...
T Consensus 253 a~i~g~~~~~d~~~~~-~-~~-~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~-~-D~~E~~a~~~~~~~~~~~~ 327 (407)
T TIGR03150 253 AEIVGYGMSGDAYHIT-A-PA-PEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPL-G-DKAETKAIKRVFGDHAYKL 327 (407)
T ss_pred EEEEEEEECCCCCCCC-C-CC-CCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC-C-CHHHHHHHHHHhccCCCCC
Confidence 4688877654432110 0 11 11223567899999999999999999865 322221 1 233444555555531 123
Q ss_pred ceEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 130 ~~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
|+.. =...++||+..+..++..++.|.
T Consensus 328 ~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ 359 (407)
T TIGR03150 328 AVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGV 359 (407)
T ss_pred ceeCCcchhchhHHHHHHHHHHHHHHHHhcCC
Confidence 3322 23456788888888888888775
No 156
>PLN02932 3-ketoacyl-CoA synthase
Probab=81.24 E-value=1.5 Score=45.38 Aligned_cols=49 Identities=22% Similarity=0.337 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCC--CCCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNG 386 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~--~~vN~~G 386 (406)
..|++++|+++|++++|||++-++ +.++.......+.||+.+ ..+|.+|
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~g 207 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGG 207 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEecc
Confidence 479999999999999999999654 677888889999999964 3567664
No 157
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=80.78 E-value=12 Score=36.96 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=57.8
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
..|+|.+.+--+.+.. ......+-...++++||+++||+++|||.|.. |+..+.. .....+.+...+|-....|
T Consensus 184 a~I~g~~~~~d~~~~~---~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~--D~~E~~Ai~~~fg~~~~~~ 258 (342)
T PRK14691 184 AEIVGYGTSADAYHMT---SGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG--DLGEINAIKHLFGESNALA 258 (342)
T ss_pred EEEEEEEEEcCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC--CHHHHHHHHHHhCCCCCce
Confidence 5677877654432211 01123445677899999999999999998764 3332221 2445666666666311233
Q ss_pred eEEE-----cCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VRTV-----NRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~~v-----~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+..+ ...+++|...+..++..|+.|.
T Consensus 259 v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ 289 (342)
T PRK14691 259 ITSTKSATGHLLGAAGGLETIFTVLALRDQI 289 (342)
T ss_pred EECCcccccCCcchhhHHHHHHHHHHHhCCc
Confidence 3332 2345666555556666677664
No 158
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=80.65 E-value=0.99 Score=41.93 Aligned_cols=60 Identities=27% Similarity=0.257 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc----hHHHHHHHHHcCCCCC----CCCCCCCccccCCccchhHHHHH
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDPE----KINVNGGALAIGHPLGTTGNCCS 403 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f----a~~~l~~~e~lGl~~~----~vN~~GG~~a~Ghp~GatG~~~v 403 (406)
.+|++++|+++|++++||+.+-.-.|- +......++.|||.+. +|+- .|=-.|++|++.-
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~------~GC~gg~~~L~~A 172 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFG------MGCAGGAAGLRRA 172 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-------GGGHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEec------cchhhHHHHHHHH
Confidence 479999999999999999999876554 3457888999999885 3443 3444566666543
No 159
>PRK07937 lipid-transfer protein; Provisional
Probab=80.33 E-value=16 Score=36.24 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=60.6
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~d-Agl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
+.|+|.|.+..--.... ...+.... .+.+.++++ ||++|+|||.+-+--.+ ....-...+.+||...
T Consensus 225 ~pv~I~g~~~~~~~~~~--~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~D~F------~~~~l~~~e~lGl~g~ 292 (352)
T PRK07937 225 RPAWITGIEHRIESPSL--GARDLTRS----PSTALAAEAATGGDAGGVDVAELHAPF------THQELILREALGLGDK 292 (352)
T ss_pred CcEEEEEEEEeeCCccc--cccccccH----HHHHHHHHHhcCCCHHHCCEEEEeCCC------hHHHHHHHHHcCCCCC
Confidence 45899998774111100 11223332 333444555 59999999998663211 2223344567787322
Q ss_pred CceEE------EcCCCchHHHHHHHHHHHHHcCCCCEEEEEe
Q 015474 129 VPVRT------VNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 164 (406)
Q Consensus 129 ~~~~~------v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G 164 (406)
.|+-+ -+...+||+.-+.+++..++.+.++++|+.+
T Consensus 293 ~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~ 334 (352)
T PRK07937 293 TKVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA 334 (352)
T ss_pred CCcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 22221 2222457888899999999999899998875
No 160
>PRK04262 hypothetical protein; Provisional
Probab=80.11 E-value=3.5 Score=40.80 Aligned_cols=83 Identities=20% Similarity=0.121 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE-----E-EcCCCchHHHHHHHHHH
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-----T-VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~-----~-v~~~CaSg~~Ai~~Aa~ 150 (406)
....++++++|+++|++++|||.+++=+. ....-..++..+|+|...-.. . =|.+++|-..++..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~ 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP------NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC------chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH
Confidence 46678889999999999999998887321 234556678899997433221 1 24444555566666655
Q ss_pred HHHcCCCCEEEEEeecC
Q 015474 151 AIKAGFYDIGIGAGLES 167 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~E~ 167 (406)
.++. -|.+|.+++=.
T Consensus 283 ~~~~--Gd~vll~~~G~ 297 (347)
T PRK04262 283 VAKP--GDRILVVSFGS 297 (347)
T ss_pred hCCC--CCEEEEEecCC
Confidence 4444 47777776543
No 161
>PRK07855 lipid-transfer protein; Provisional
Probab=80.01 E-value=5.7 Score=40.01 Aligned_cols=61 Identities=20% Similarity=0.191 Sum_probs=39.3
Q ss_pred EEEEEEEEeecCCCCCCCCH----HHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCC
Q 015474 318 GVFRTFAAVGVDPAIMGVGP----AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP 379 (406)
Q Consensus 318 a~i~g~~~~~~~p~~~~~~~----~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~ 379 (406)
..|+|.+.....+. .+..+ .+|+++||+.|||+++|||.+-++...........+.||+.+
T Consensus 6 v~IvG~g~t~~~r~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~ 70 (386)
T PRK07855 6 AAIVGIGATEFSKN-SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGE 70 (386)
T ss_pred EEEEEeeecccccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCC
Confidence 46788877543222 12222 479999999999999999977552111111245678899976
No 162
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=79.82 E-value=8.5 Score=39.02 Aligned_cols=96 Identities=11% Similarity=0.048 Sum_probs=56.9
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC-Cc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-VP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~-~~ 130 (406)
+.|+|.+.+..... ... .-...+++++|+++||+++|||.+-+.-. + ..........+|+... .|
T Consensus 280 a~I~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~DId~~ei~D~----f--~~~~l~~~e~lg~~~~~~p 345 (401)
T PRK09050 280 ARILGMATAGVEPR----IMG----IGPAPATRKLLARLGLTIDQFDVIELNEA----F--AAQGLAVLRQLGLADDDAR 345 (401)
T ss_pred EEEEEEEEeccCCc----ccc----chHHHHHHHHHHHcCCCHHHCCccccCcH----h--HHHHHHHHHHcCCCCCCCC
Confidence 57888776543221 111 12357889999999999999999875211 1 1122334467888322 23
Q ss_pred eEEEcCC--------CchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 131 VRTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 131 ~~~v~~~--------CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
+ +.+.+ .+||..-+.+++..++......+|+
T Consensus 346 v-N~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~~ 384 (401)
T PRK09050 346 V-NPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALC 384 (401)
T ss_pred E-eCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 2 22222 4567778888888887554555554
No 163
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=79.69 E-value=11 Score=37.89 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC-CCCceEE-----EcCCCchHHHHHHHHHH
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP-ETVPVRT-----VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~-~~~~~~~-----v~~~CaSg~~Ai~~Aa~ 150 (406)
+-..++++++|+++|++++|||.|..-....... .......+...++-. ...++.. =+..++||+..+..++.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~-d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 353 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLN-DAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLL 353 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccc-cHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHH
Confidence 4456788999999999999999877632211111 233444444444431 1233332 23678899999999999
Q ss_pred HHHcCC
Q 015474 151 AIKAGF 156 (406)
Q Consensus 151 ~I~sG~ 156 (406)
+++.|.
T Consensus 354 ~l~~~~ 359 (406)
T cd00834 354 ALRDGV 359 (406)
T ss_pred HHhcCC
Confidence 999884
No 164
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=79.23 E-value=7.9 Score=39.08 Aligned_cols=100 Identities=16% Similarity=0.103 Sum_probs=57.8
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC-CCC
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETV 129 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~-~~~ 129 (406)
++|.|.+.+.-+... ...+.. ..-...++++||+++|++++|||.+.. |+..+.. .......+...+|.. ...
T Consensus 254 a~I~g~~~~~d~~~~--~~~~~~-~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~--d~~E~~al~~~~~~~~~~~ 328 (411)
T PRK07314 254 AEVVGYGMTGDAYHM--TAPAPD-GEGAARAMKLALKDAGINPEDIDYINAHGTSTPAG--DKAETQAIKRVFGEHAYKV 328 (411)
T ss_pred EEEEEEEEcCCCCCC--CCCCCC-cHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccc--cHHHHHHHHHHhcccCCCC
Confidence 468888776433211 011111 122457889999999999999999864 3322111 233344455555531 123
Q ss_pred ceEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 130 PVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 130 ~~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
++.. =+..++||...+..++..++.|.
T Consensus 329 ~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 329 AVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred eeECccchhchhHHHHHHHHHHHHHHHHhCCC
Confidence 3322 23456788888888888888875
No 165
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=79.08 E-value=7 Score=38.25 Aligned_cols=83 Identities=19% Similarity=0.105 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE----cCCCchHHHHHHHHHHH-
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAA- 151 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v----~~~CaSg~~Ai~~Aa~~- 151 (406)
.....+++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++ |.+++|-..++..+...
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~------~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g 312 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQV------GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEG 312 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCC------CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhC
Confidence 44556788899999999999999887332 23455678889999753333333 33334444445444332
Q ss_pred -HHcCCCCEEEEEeecC
Q 015474 152 -IKAGFYDIGIGAGLES 167 (406)
Q Consensus 152 -I~sG~~d~vL~~G~E~ 167 (406)
++. -|.+|.+++..
T Consensus 313 ~~~~--Gd~vll~~~G~ 327 (338)
T PRK09258 313 FLKP--GDRVALLGIGS 327 (338)
T ss_pred CCCC--CCEEEEEEech
Confidence 333 37888887664
No 166
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=78.99 E-value=3.2 Score=38.39 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCc----cHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~----~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa 149 (406)
...+.+...+.++|.++|++..|+|.|+++..-++.. |- ..++-++..+| .|++.|++ +.++...
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFT-GlRIG~~~AkgLA~~l~----iplvgvss-----L~~~A~~- 104 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFT-GLRIGVAFAKGLALALN----IPLVGVSS-----LEALAQG- 104 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCccc-chhhHHHHHHHHHHHcC----CCEEEeCH-----HHHHHHh-
Confidence 4578889999999999999999999999987544433 32 23444444444 46776643 4444332
Q ss_pred HHHHcCCCCEEEEE
Q 015474 150 AAIKAGFYDIGIGA 163 (406)
Q Consensus 150 ~~I~sG~~d~vL~~ 163 (406)
.+......+++.
T Consensus 105 --~~~~~~~~v~v~ 116 (220)
T COG1214 105 --GAEKNAGFVLVA 116 (220)
T ss_pred --hhccCCCceEEE
Confidence 555555666653
No 167
>PRK08256 lipid-transfer protein; Provisional
Probab=78.96 E-value=17 Score=36.53 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=57.4
Q ss_pred CceEEEEeeecccccCCCC--CCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRG--GFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g--~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
..|+|.|.+.+......-+ ...+.........+++++|+++|++++|||.+-+--.+ ........+.+||.+
T Consensus 235 ~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f------~~~~l~~le~lg~~~ 308 (391)
T PRK08256 235 RAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCF------SANELLTYEALGLCP 308 (391)
T ss_pred CCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCC------cHHHHHHHHHcCCCC
Confidence 4588888765433211000 01112222334578999999999999999998763211 223334456778753
Q ss_pred CC-----------------ceEE-------EcCCCchHHHHHHHHHHHHH
Q 015474 128 TV-----------------PVRT-------VNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 128 ~~-----------------~~~~-------v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
.. |+-+ -+..++||+.-+.+++..++
T Consensus 309 ~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 309 EGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 21 2221 12344678888999999987
No 168
>PLN02192 3-ketoacyl-CoA synthase
Probab=78.42 E-value=1.8 Score=45.13 Aligned_cols=49 Identities=20% Similarity=0.204 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCC--CCCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNG 386 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~--~~vN~~G 386 (406)
..|++++|+++|++++|||++-++ .++++...+..+.||+.+ ..+|.+|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg 235 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG 235 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc
Confidence 369999999999999999998654 345667788889999974 3567665
No 169
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=78.29 E-value=24 Score=35.62 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=56.3
Q ss_pred eEEEEeeecccccCCCCC----CCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 52 VVIVAAYRTALCKSKRGG----FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~----~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
|+|+|.+.......+... ..+.........++++|++.+|++++|||.+-+--.+ ....-...+.+||.+
T Consensus 247 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~f------a~~~l~~le~lGl~~ 320 (403)
T PRK06289 247 PRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCF------TPSEYLAIDHIGLTG 320 (403)
T ss_pred EEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccc------hHHHHHHHHHcCCCC
Confidence 799999875332211110 0111122334679999999999999999987763221 222334456778743
Q ss_pred C---------------C--ceEE----E---cCCCchHHHHHHHHHHHHHc
Q 015474 128 T---------------V--PVRT----V---NRQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 128 ~---------------~--~~~~----v---~~~CaSg~~Ai~~Aa~~I~s 154 (406)
. . |+-+ + ....+||+.-+.+++..++-
T Consensus 321 ~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg 371 (403)
T PRK06289 321 PGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTG 371 (403)
T ss_pred CCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhc
Confidence 1 1 2111 1 12236788888999998873
No 170
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=78.16 E-value=19 Score=36.33 Aligned_cols=97 Identities=11% Similarity=0.001 Sum_probs=55.0
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~--~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~ 127 (406)
+.|+|.|.+..--.... ...+.........+++++++.+|++ ++|||.+-+--. + ....-...+.+||..
T Consensus 231 ~pv~I~g~g~~~~~~~~--~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~----F--t~~~l~~~e~lG~~~ 302 (385)
T PRK06066 231 DPVWIKGIGWSTESSNL--ETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDR----Y--SYKELQHIEALRLSE 302 (385)
T ss_pred CCEEEEEEEEecCCccc--ccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecC----C--hHHHHHHHHHcCCCC
Confidence 45788888763210000 0122222333347899999999997 699998876321 1 122334446677743
Q ss_pred CCce----------------EEE--------cCCCchHHHHHHHHHHHHHc
Q 015474 128 TVPV----------------RTV--------NRQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 128 ~~~~----------------~~v--------~~~CaSg~~Ai~~Aa~~I~s 154 (406)
.... ++. +...+||+.-+.+++..++-
T Consensus 303 ~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g 353 (385)
T PRK06066 303 EPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRG 353 (385)
T ss_pred CCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcc
Confidence 2111 111 23346788888888888874
No 171
>PLN02377 3-ketoacyl-CoA synthase
Probab=78.00 E-value=1.8 Score=45.10 Aligned_cols=49 Identities=20% Similarity=0.235 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCC--CCCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNG 386 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~--~~vN~~G 386 (406)
..|++++|+++|++++|||++-++ ..+++...+..+.||+.+ ..+|.+|
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g 231 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG 231 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc
Confidence 369999999999999999999663 245667788899999975 3577765
No 172
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=77.96 E-value=4.1 Score=39.52 Aligned_cols=78 Identities=18% Similarity=0.206 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE----cCCCchHHHHHHHHHHHHHc
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v----~~~CaSg~~Ai~~Aa~~I~s 154 (406)
..++++++|+++|++++|||.+++-+. +...-+.++..+|+|...-..++ |.++++-...+..+ +++
T Consensus 221 ~~~~~~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~---~~~ 291 (318)
T TIGR00747 221 MGDVVEETLEANGLDPEDIDWFVPHQA------NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL---LRT 291 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---HHc
Confidence 456788899999999999999887322 23456678899999753333334 23333444444443 344
Q ss_pred CC---CCEEEEEee
Q 015474 155 GF---YDIGIGAGL 165 (406)
Q Consensus 155 G~---~d~vL~~G~ 165 (406)
|. -|.+|.+++
T Consensus 292 ~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 292 GRIKPGDLLLLVAF 305 (318)
T ss_pred CCCCCCCEEEEEEE
Confidence 43 377777765
No 173
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.83 E-value=12 Score=37.76 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=60.1
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
..|.|.+.+--+.+. ...+. ..+-...+++++|+++|++|+|||.|.. |+..+. . .......+...+|- ..|
T Consensus 232 a~I~g~~~~~d~~~~--~~~~~-~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~-~-D~~E~~al~~~fg~--~~~ 304 (381)
T PRK05952 232 GQILGFGLTCDAYHM--SAPEP-DGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRL-N-DQREANLIQALFPH--RVA 304 (381)
T ss_pred EEEEEEEecCCCCCC--CCCCC-CHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCC-C-cHHHHHHHHHHcCC--CCe
Confidence 357888776443321 11122 2345678999999999999999999875 332221 1 23344555555552 334
Q ss_pred eEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+.. =...+++|...+..+...++.|.
T Consensus 305 v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ 335 (381)
T PRK05952 305 VSSTKGATGHTLGASGALGVAFSLLALRHQQ 335 (381)
T ss_pred eecchhhhccChHHHHHHHHHHHHHHHhcCc
Confidence 433 23556788888888888888875
No 174
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=77.51 E-value=13 Score=37.04 Aligned_cols=107 Identities=18% Similarity=0.227 Sum_probs=73.3
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccH-HHHHHHHc--CCCC
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASE-CRMAAFYA--GFPE 127 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~-a~~va~~l--Gl~~ 127 (406)
.-|=+|-|++.++= -. ...+...|..-+++.++++-.|+++.|..+-||+-.--.- .-.. .....+.- |- .
T Consensus 40 gKytIGLGq~~Mgf--cs--drEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK-SKSVKt~LMqLF~~sgN-t 113 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGF--CS--DREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-T 113 (462)
T ss_pred cceEeccCcceecc--cC--chhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc-chHHHHHHHHHhhhcCC-C
Confidence 34778999988862 11 2234677888899999999999999999999997543211 0111 11222222 43 3
Q ss_pred CCceEEEcCCCchHHHHHHHHHHHHHcC----CCCEEEEE
Q 015474 128 TVPVRTVNRQCSSGLQAVADVAAAIKAG----FYDIGIGA 163 (406)
Q Consensus 128 ~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG----~~d~vL~~ 163 (406)
....++..++|=+|..||-.|.+.|.+- +.-+|+|+
T Consensus 114 dIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~g 153 (462)
T KOG1393|consen 114 DIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCG 153 (462)
T ss_pred ccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEe
Confidence 5667778899999999999999999874 44455444
No 175
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=77.42 E-value=7.4 Score=39.01 Aligned_cols=81 Identities=12% Similarity=0.216 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHH-HHHHHcCC-
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV-AAAIKAGF- 156 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~A-a~~I~sG~- 156 (406)
...+++++|+++|++++|||.++.-+. +...-..++..+|+|...-..++.+-+.++...+-.+ .+.++.|.
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~ 355 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA------NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKV 355 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcCCC
Confidence 335678889999999999998887332 2234456889999975433344544444444443332 23344443
Q ss_pred --CCEEEEEee
Q 015474 157 --YDIGIGAGL 165 (406)
Q Consensus 157 --~d~vL~~G~ 165 (406)
-|.+|.+|+
T Consensus 356 ~~Gd~vll~~~ 366 (379)
T PLN02326 356 KKGDVIATAGF 366 (379)
T ss_pred CCCCEEEEEEE
Confidence 367777764
No 176
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.07 E-value=8.4 Score=39.16 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=58.6
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCC--C--
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF--P-- 126 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl--~-- 126 (406)
..|+|++.|--+.+.. ... ..-+=+..+++.||+++|++++|||.|.. |+.++.. .......+...+|= .
T Consensus 254 aei~G~g~~~Da~h~t-~P~--p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n--D~~E~~ai~~vfg~~~~~~ 328 (412)
T COG0304 254 AEIVGYGTTSDAYHIT-APA--PDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN--DKAESLAIKRVFGEHAKSL 328 (412)
T ss_pred EEEEEEEecccccccC-CCC--CCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc--cHHHHHHHHHHhcccccCc
Confidence 4578888776554321 000 01333568899999999999999999876 4433322 24556666666662 0
Q ss_pred --CCCceEEEcCCCchHHHHHHHHHHHHHcC
Q 015474 127 --ETVPVRTVNRQCSSGLQAVADVAAAIKAG 155 (406)
Q Consensus 127 --~~~~~~~v~~~CaSg~~Ai~~Aa~~I~sG 155 (406)
..+..++=....++|..-...+...|+.|
T Consensus 329 ~vsstKs~tGH~lGAaGaveai~~~l~l~~g 359 (412)
T COG0304 329 PVSSTKSLTGHTLGAAGAVEAIISLLALRDG 359 (412)
T ss_pred eeeecccccccChhhHHHHHHHHHHHHHhcC
Confidence 12334444455555655555666667655
No 177
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=77.00 E-value=4.3 Score=39.06 Aligned_cols=49 Identities=22% Similarity=0.384 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC--CCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNG 386 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~--~vN~~G 386 (406)
..+++++|+++|++|+|||++-++ -+.++..-+.++.+|+.++ ..|.+|
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsG 142 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSG 142 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccC
Confidence 369999999999999999998765 4455667788899999875 466654
No 178
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=76.52 E-value=5.4 Score=39.53 Aligned_cols=88 Identities=9% Similarity=-0.014 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCC-CCCCceEE-----EcCCCchHHHHHHHHHH
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF-PETVPVRT-----VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl-~~~~~~~~-----v~~~CaSg~~Ai~~Aa~ 150 (406)
+=..++++++|+++|+++++||.|+.-.. +........+..+...+|- ....|+.. =+.+.++|...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~-gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADLN-GEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCCC-CCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 44578899999999999999999876322 1111012233334444442 11223332 23455677777888888
Q ss_pred HHHcCC--CCEEEEEee
Q 015474 151 AIKAGF--YDIGIGAGL 165 (406)
Q Consensus 151 ~I~sG~--~d~vL~~G~ 165 (406)
.++.|. -+.+|+...
T Consensus 313 ~~~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLS 329 (348)
T ss_pred HHHcCcCCCCcEEEEec
Confidence 999995 467777653
No 179
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=76.43 E-value=18 Score=36.70 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCC--CCCCceEEE-----cCCCchHHHHHHHHH
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF--PETVPVRTV-----NRQCSSGLQAVADVA 149 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v-----~~~CaSg~~Ai~~Aa 149 (406)
-...+++++|+++|++|+|||.|.. |+..+.. .....+.+...+|- +...|+..+ ....++|...+..++
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~--D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~ 356 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG--DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITV 356 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC--CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHH
Confidence 3567889999999999999998764 3332221 24456666666653 122344332 345677887787788
Q ss_pred HHHHcCC
Q 015474 150 AAIKAGF 156 (406)
Q Consensus 150 ~~I~sG~ 156 (406)
..++.|.
T Consensus 357 l~l~~~~ 363 (414)
T PRK08722 357 MSLVDQI 363 (414)
T ss_pred HHHhcCc
Confidence 8888775
No 180
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=76.13 E-value=12 Score=37.88 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=56.6
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
.+.|+|.+.+-.... ... .-...+++++|+++|++++|||.+-+. +.+ ..........+|+.....
T Consensus 278 ~~~I~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~DID~~ei~----D~f--~~~~l~~~e~lG~~~~~~ 343 (400)
T TIGR02430 278 RARILAAATAGVEPR----IMG----IGPVPATQKLLARAGLSIDQFDVIELN----EAF--AAQALAVLRELGLADDDA 343 (400)
T ss_pred cEEEEEEEEecCCCc----ccc----chHHHHHHHHHHHhCCCHHHCCCcccC----cHH--HHHHHHHHHHcCCCCCCC
Confidence 467788766532111 111 123578899999999999999988742 111 122334456788832222
Q ss_pred eEEEcCC--------CchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 131 VRTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 131 ~~~v~~~--------CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
-++.+.+ .+||...+.+++..++......+|+
T Consensus 344 pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~ 383 (400)
T TIGR02430 344 RVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALC 383 (400)
T ss_pred eECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 2222222 3567778888888887544455544
No 181
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=76.12 E-value=5.6 Score=38.86 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHH-HHHHHcCC-
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADV-AAAIKAGF- 156 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~A-a~~I~sG~- 156 (406)
...+++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++.+-+.++...+-.+ ...++.|.
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~------~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~ 301 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQA------NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKI 301 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCC
Confidence 445688899999999999999888432 2345567889999975443334433333333333222 23344444
Q ss_pred --CCEEEEEee
Q 015474 157 --YDIGIGAGL 165 (406)
Q Consensus 157 --~d~vL~~G~ 165 (406)
-|.+|.+|+
T Consensus 302 ~~Gd~vll~~~ 312 (326)
T CHL00203 302 QPGQIIVLSGF 312 (326)
T ss_pred CCCCEEEEEEE
Confidence 357777664
No 182
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=75.92 E-value=16 Score=36.70 Aligned_cols=97 Identities=11% Similarity=0.030 Sum_probs=56.4
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
..+.|.|.+........ +...+.....-...++++||+.+|++++|||.+-+-... ..........+||....
T Consensus 231 ~~~~I~g~g~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~f------t~~~l~~le~lGl~~~G 303 (385)
T PRK12578 231 SPVWITGIGYANDYAYV-ARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAF------TIAEIMGYEDLGFTEKG 303 (385)
T ss_pred CCeEEEEEEEecCcccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcC------hHHHHHHHHHcCCCCCC
Confidence 45889998875332111 111222222235578999999999999999997663211 22333445677774211
Q ss_pred c----------------eEEEc--------CCCchHHHHHHHHHHHHH
Q 015474 130 P----------------VRTVN--------RQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 130 ~----------------~~~v~--------~~CaSg~~Ai~~Aa~~I~ 153 (406)
. -++.+ ...+||+.-+.+++..++
T Consensus 304 ~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLr 351 (385)
T PRK12578 304 KGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLR 351 (385)
T ss_pred chHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHh
Confidence 0 11222 223568888888888887
No 183
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=75.62 E-value=12 Score=37.61 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=59.3
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|.|.+.+.... +... .-...+++++|+++|++|+|||.+-+-. .+ ..........+|+. ..|+
T Consensus 269 ~~i~g~g~~~~~~-------~~~~-~~~~~a~~~a~~~Agi~~~did~~e~~d----~f--a~~~~~~~e~lG~~-~~pv 333 (386)
T TIGR01930 269 ARIVSFAVAGVDP-------EIMG-LGPVPAIPKALKKAGLSISDIDLFEINE----AF--AAQVLACIKELGLD-LEKV 333 (386)
T ss_pred EEEEEEEEecCCC-------cccc-ccHHHHHHHHHHHcCCCHHHCCeeehcc----hh--HHHHHHHHHHhCCC-hhhc
Confidence 5788887653211 1111 1235789999999999999999985421 11 11222333567762 1222
Q ss_pred E-------EEcCCCchHHHHHHHHHHHHHcCCCCEEEEE
Q 015474 132 R-------TVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (406)
Q Consensus 132 ~-------~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~ 163 (406)
. .=...+++|+..+.+++..++....+++|+-
T Consensus 334 n~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~ 372 (386)
T TIGR01930 334 NVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLAT 372 (386)
T ss_pred CCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 1 1123356788889999999987667888774
No 184
>PLN03168 chalcone synthase; Provisional
Probab=75.19 E-value=3 Score=42.13 Aligned_cols=43 Identities=26% Similarity=0.203 Sum_probs=35.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~ 380 (406)
.+|+++||+++|++++|||++-+. ..++.......+.||+.+.
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~ 152 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPT 152 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCc
Confidence 479999999999999999999764 3356677888899999764
No 185
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=74.85 E-value=23 Score=35.73 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=58.4
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC----C
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP----E 127 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~----~ 127 (406)
.|.|.+.+--+... .+. ....+-...+++++|+++|++++|||.+.. ++..... .......+...+|.. .
T Consensus 258 ~I~g~~~~~~~~~~--~~~-~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~--d~~E~~al~~~~~~~~~~~~ 332 (424)
T smart00825 258 VIRGSAVNQDGRSN--GLT-APSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG--DPIEAEALAAVFGQGRPRDG 332 (424)
T ss_pred EEEEEEEeCCCCCC--CCC-CcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC--CHHHHHHHHHHHhccCCCCC
Confidence 47777655333211 111 122445567899999999999999999876 3332211 123344455555431 1
Q ss_pred CCceEE-----EcCCCchHHHHHHHHHHHHHcCCC
Q 015474 128 TVPVRT-----VNRQCSSGLQAVADVAAAIKAGFY 157 (406)
Q Consensus 128 ~~~~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~~ 157 (406)
..|+.. =...++||+..+..+...++.|.+
T Consensus 333 ~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 367 (424)
T smart00825 333 PLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTI 367 (424)
T ss_pred ceEEeccccccCCcccchhHHHHHHHHHHHhCCCC
Confidence 123322 234467888888888888888753
No 186
>PLN03170 chalcone synthase; Provisional
Probab=74.44 E-value=3.6 Score=41.70 Aligned_cols=43 Identities=21% Similarity=0.184 Sum_probs=35.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~ 380 (406)
..|+++||+++|++++|||++-+- ..++....+..+.||+.+.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~ 157 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPS 157 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcc
Confidence 479999999999999999986432 2367788899999999764
No 187
>PRK06840 hypothetical protein; Validated
Probab=74.42 E-value=11 Score=36.98 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE----cCCCchHHHHHHHHHHHHHc
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v----~~~CaSg~~Ai~~Aa~~I~s 154 (406)
..++++++|+++|++++|||.++.-+. +...-+.+...+|+|... .+.+ |.++++-...+.. .+++
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~~------~~~~~~~~~~~Lgl~~~~-~~~~~~~Gn~~sas~~~~L~~---~~~~ 308 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILHM------KRSAHIALLEGLGLTEEQ-AIYLDEYGHLGQLDQILSLHL---ALEQ 308 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCc------CHHHHHHHHHHcCCCHHH-eEeHHhccchhhhhHHHHHHH---HHHc
Confidence 457888999999999999999876332 233446688899997432 2222 2333333334443 3444
Q ss_pred CC---CCEEEEEee
Q 015474 155 GF---YDIGIGAGL 165 (406)
Q Consensus 155 G~---~d~vL~~G~ 165 (406)
|. -|.+|.+++
T Consensus 309 ~~~~~Gd~ill~~~ 322 (339)
T PRK06840 309 GKLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCCEEEEEEE
Confidence 43 366776664
No 188
>PLN03169 chalcone synthase family protein; Provisional
Probab=74.40 E-value=3.2 Score=41.94 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccc----cchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd----~fa~~~l~~~e~lGl~~~ 380 (406)
..|+++||+++|++++|||++-+.- .++....+..+.||+.+.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~ 157 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPD 157 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCc
Confidence 4799999999999999999875543 356667788899999763
No 189
>PRK12404 stage V sporulation protein AD; Provisional
Probab=74.29 E-value=3.7 Score=40.09 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccc----cchHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd----~fa~~~l~~~e~lGl~~ 379 (406)
.+|+++||+++||+++|||++-.-+ .++.. +..+.||++-
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP~ 102 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIPY 102 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCCc
Confidence 4799999999999999999998854 44443 7778999764
No 190
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=74.26 E-value=18 Score=36.77 Aligned_cols=100 Identities=12% Similarity=0.053 Sum_probs=57.4
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
..|.|++.+-=+.+.. ......+-...++++||+++|++|+|||.|.. |+..+.. .......+...+|-....+
T Consensus 266 a~i~G~~~~~d~~~~~---~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~--D~~E~~al~~~fg~~~~~~ 340 (424)
T PRK06333 266 AELVGYGTSADAYHMT---AGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG--DLGEVAAIKKVFGHVSGLA 340 (424)
T ss_pred EEEEEEEEcCCCCCCC---CCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc--hHHHHHHHHHHhCCCCCce
Confidence 3577777653322110 01112344678899999999999999999865 3322211 2334455556665211233
Q ss_pred eEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+.. =...+++|...+..++..++.|.
T Consensus 341 v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ 371 (424)
T PRK06333 341 VSSTKSATGHLLGAAGGVEAIFTILALRDQI 371 (424)
T ss_pred eECcccchhhhHHHHHHHHHHHHHHHHhcCC
Confidence 322 22345677777777788888775
No 191
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=74.19 E-value=14 Score=37.36 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=57.0
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|+|.+...... +.. ..-...+++++|+++|++++|||.+-+. +.+ ..........+|+.....-
T Consensus 279 a~I~g~~~~~~~p-------~~~-~~~~~~A~~~al~~AGl~~~DID~iei~----daf--a~~~l~~~e~lg~~~~~~p 344 (400)
T PRK13359 279 ARVLGIATAGVEP-------RVM-GIGPAPATQKLLARLGMTLDQFDVIELN----EAF--ASQGLAVLRELGLADDDAR 344 (400)
T ss_pred EEEEEEEEecCCC-------Ccc-chhHHHHHHHHHHHhCCCHHHcCcCccC----cHh--HHHHHHHHHHcCCCCCCCC
Confidence 7788887653211 111 1123678899999999999999988742 111 1122334456787321122
Q ss_pred EEEcCC--------CchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 132 RTVNRQ--------CSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 132 ~~v~~~--------CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
++.+.+ .+||..-+.+++..++......+|+
T Consensus 345 vN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~ 383 (400)
T PRK13359 345 VNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALC 383 (400)
T ss_pred EECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 233332 3578888888888887544455554
No 192
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=74.18 E-value=11 Score=38.02 Aligned_cols=64 Identities=19% Similarity=0.104 Sum_probs=40.2
Q ss_pred EEEEEEEEeecCCCCCCCC----HHHHHHHHHHHcCCCCCCccEEEccccchH-HHHHHHHHcCCCCCCC
Q 015474 318 GVFRTFAAVGVDPAIMGVG----PAVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKI 382 (406)
Q Consensus 318 a~i~g~~~~~~~p~~~~~~----~~~A~~~al~~AGl~~~DID~~e~hd~fa~-~~l~~~e~lGl~~~~v 382 (406)
..|+|.+....... .... ..+|+++||+.|||+++|||.+-.+...+. ......+.||+.+.++
T Consensus 7 vaIvG~g~t~~~~~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~ 75 (388)
T PRK08142 7 AYIVGAYEHPTRKA-PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHV 75 (388)
T ss_pred EEEEEEeeccceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeee
Confidence 46888877543221 1112 257999999999999999997644211111 1234678999976543
No 193
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=73.93 E-value=26 Score=35.36 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=60.0
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|.|.+.+..... ... .-...+++++|+++|++++|||.+-+-.. .....-.....+|++. .|+
T Consensus 275 a~i~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~dId~~e~~d~------f~~~~l~~~e~lg~~~-~~v 339 (394)
T PRK06445 275 AKIRSFGFAGVPPA----IMG----KGPVPASKKALEKAGLSVKDIDLWEINEA------FAVVVLYAIKELGLDP-ETV 339 (394)
T ss_pred EEEEEEEEeccCCc----hhc----chHHHHHHHHHHHcCCCHHHcCEEEeccc------chHHHHHHHHHhCCCc-ccc
Confidence 46778776543211 111 12467889999999999999999876321 1223334556788742 221
Q ss_pred E-------EEcCCCchHHHHHHHHHHHHHcCCCCEEEEE
Q 015474 132 R-------TVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (406)
Q Consensus 132 ~-------~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~ 163 (406)
- .-+...+||+.-+.+++..++....+.+|+.
T Consensus 340 N~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~ 378 (394)
T PRK06445 340 NIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVAT 378 (394)
T ss_pred CCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEEE
Confidence 1 1234457888888888888876556666654
No 194
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=73.85 E-value=19 Score=36.21 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=58.9
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC----
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP---- 126 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~---- 126 (406)
+.|.|.+.+.-+... . . .....+-...++++||+++|++++|||.+.. |+.... . .......+...++-.
T Consensus 257 a~i~g~~~~~~~~~~-~-~-~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~-~-D~~E~~al~~~f~~~~~~~ 331 (421)
T cd00833 257 AVIRGSAVNQDGRTK-G-I-TAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL-G-DPIEVEALAKVFGGSRSAD 331 (421)
T ss_pred EEEEEEEEcCCCCCC-C-C-cCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCC-C-CHHHHHHHHHHHhccCCCC
Confidence 467777765443211 1 1 1112455568999999999999999999876 332221 1 123333444443321
Q ss_pred CCCceE-----EEcCCCchHHHHHHHHHHHHHcCCCCE
Q 015474 127 ETVPVR-----TVNRQCSSGLQAVADVAAAIKAGFYDI 159 (406)
Q Consensus 127 ~~~~~~-----~v~~~CaSg~~Ai~~Aa~~I~sG~~d~ 159 (406)
...++. .-....++|+..+..++..++.|...-
T Consensus 332 ~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~ 369 (421)
T cd00833 332 QPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPP 369 (421)
T ss_pred CceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCC
Confidence 112222 234556788888888888888876443
No 195
>PLN03171 chalcone synthase-like protein; Provisional
Probab=73.34 E-value=3.7 Score=41.58 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEc----cccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEI----NEAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~----hd~fa~~~l~~~e~lGl~~~ 380 (406)
..|++++|+++|++++|||++-+ .+.++.......+.||+.+.
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 159 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPS 159 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcc
Confidence 47999999999999999999976 34577778888999999753
No 196
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=73.33 E-value=21 Score=36.61 Aligned_cols=99 Identities=10% Similarity=0.022 Sum_probs=55.3
Q ss_pred eEEEEeeecccccCCCCCCCCCC-HHHHHHHHHHHHHHHcCCCCCCCCeEEEE-eecCCCCCCccHHHHHHHHcCCC---
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTY-PDDLLAPVLKAVIEKTNVDPSEVGDIVVG-TVLAPGSQRASECRMAAFYAGFP--- 126 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~-~~~L~~~A~~~AL~dAgl~~~~ID~v~~g-~~~~~~~~~~~~a~~va~~lGl~--- 126 (406)
+.|.|.+.+.-+.+ +.... ..+-...++++||+++||+++|||.|..- +..+ .. .....+.+...+|-.
T Consensus 277 a~I~g~~~~~d~~~----~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~-~~-D~~E~~ai~~~~~~~~~~ 350 (437)
T PLN02836 277 AEVRGYGMSGDAHH----ITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTP-LG-DAVEARAIKTVFSEHATS 350 (437)
T ss_pred EEEEeeeecCCCCC----CcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCc-Cc-CHHHHHHHHHHhcccccC
Confidence 46788876544321 11111 23445678999999999999999988652 2221 11 233344444444421
Q ss_pred CCCceEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 127 ETVPVRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 127 ~~~~~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
...|+.. =+...++|...+..++..++.|.
T Consensus 351 ~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (437)
T PLN02836 351 GGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGI 385 (437)
T ss_pred CCCeeECCcccccccHHHHHHHHHHHHHHHHhcCc
Confidence 0122222 23345677777777777888774
No 197
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=73.21 E-value=23 Score=36.06 Aligned_cols=99 Identities=8% Similarity=-0.047 Sum_probs=58.7
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC--CC
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP--ET 128 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~d-Agl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~--~~ 128 (406)
.|+|.+.+--+.+. ...+ ...+-...++++||++ +|++++|||.|.. |+..+. . .......+...+|-. ..
T Consensus 262 ~i~g~~~~~d~~~~--~~p~-~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~-~-D~~E~~al~~~~~~~~~~~ 336 (421)
T PTZ00050 262 EIRGYGSSSDAHHI--TAPH-PDGRGARRCMENALKDGANININDVDYVNAHATSTPI-G-DKIELKAIKKVFGDSGAPK 336 (421)
T ss_pred EEEEEEEcCCCCCC--CCCC-CChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCC-C-CHHHHHHHHHHhccccCCC
Confidence 67888766443211 0111 1234456789999999 9999999999865 322211 1 123334455555531 12
Q ss_pred Cce-----EEEcCCCchHHHHHHHHHHHHHcCC
Q 015474 129 VPV-----RTVNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 129 ~~~-----~~v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
.++ ..=....++|...+..++..++.|.
T Consensus 337 ~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ 369 (421)
T PTZ00050 337 LYVSSTKGGLGHLLGAAGAVESIVTILSLYEQI 369 (421)
T ss_pred ceEECccccccccHHHHHHHHHHHHHHHHHcCc
Confidence 333 2234566788888888888888875
No 198
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=72.22 E-value=7.3 Score=39.21 Aligned_cols=64 Identities=22% Similarity=0.226 Sum_probs=40.9
Q ss_pred EEEEEEEEeecCCCCCCCCH----HHHHHHHHHHcCCCCCCccEEEcc---ccch---HHHHHHHHHcCCCCCC
Q 015474 318 GVFRTFAAVGVDPAIMGVGP----AVAIPAAVKSAGLQLDDIDLFEIN---EAFA---SQFVYCRNKLGLDPEK 381 (406)
Q Consensus 318 a~i~g~~~~~~~p~~~~~~~----~~A~~~al~~AGl~~~DID~~e~h---d~fa---~~~l~~~e~lGl~~~~ 381 (406)
..|+|.+............+ .+|+++||+.|||+++|||.+-+. |.|. .......+.||+.+.+
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~ 78 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKP 78 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCc
Confidence 35778776543111112222 579999999999999999988653 3321 1124566889997654
No 199
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=72.01 E-value=17 Score=36.48 Aligned_cols=98 Identities=15% Similarity=0.219 Sum_probs=56.9
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC-CCCc
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVP 130 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~-~~~~ 130 (406)
.|.|.+.+--+... . ... ..+-...++++||+++|+++++||.|.. ++..+. . .......+...+|-. ...|
T Consensus 254 ~i~g~~~~~d~~~~-~-~~~--~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~-~-D~~E~~ai~~~~~~~~~~~~ 327 (407)
T cd00828 254 RVAGTASTTDGAGR-S-VPA--GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPA-N-DVAESRAIAEVAGALGAPLP 327 (407)
T ss_pred EEEEEEeccCCCCC-C-CCC--ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCcc-c-cHHHHHHHHHHHhccCCCce
Confidence 46777655443211 1 111 3455677899999999999999998865 332222 1 233444444444421 1233
Q ss_pred eEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+.. =+..+++|...+..+...++.|.
T Consensus 328 v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ 358 (407)
T cd00828 328 VTAQKALFGHSKGAAGALQLIGALQSLEHGL 358 (407)
T ss_pred eecccchhccchhhhhHHHHHHHHHHHhcCc
Confidence 333 34556777777888888888764
No 200
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=71.93 E-value=8.4 Score=38.92 Aligned_cols=64 Identities=22% Similarity=0.110 Sum_probs=40.1
Q ss_pred EEEEEEEEeecCCCC--C-CCCHHHHHHHHHHHcCCCCCCccEEEcc---ccc---hHHHHHHHHHcCCCCCC
Q 015474 318 GVFRTFAAVGVDPAI--M-GVGPAVAIPAAVKSAGLQLDDIDLFEIN---EAF---ASQFVYCRNKLGLDPEK 381 (406)
Q Consensus 318 a~i~g~~~~~~~p~~--~-~~~~~~A~~~al~~AGl~~~DID~~e~h---d~f---a~~~l~~~e~lGl~~~~ 381 (406)
..|+|.+........ . ..-..+|++++|+++||+++|||.+-+- +.+ ........+.||+.+.+
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~ 83 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP 83 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC
Confidence 357777775433211 1 1112579999999999999999988653 323 11233456778876544
No 201
>PRK05790 putative acyltransferase; Provisional
Probab=71.80 E-value=19 Score=36.22 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE-------EEcCCCchHHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-------TVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~-------~v~~~CaSg~~Ai~~Aa~~ 151 (406)
...+++++|+++|++++|||.+-+. +.+ ....-.....+|+. ..|+. .=...++||..-+.+++..
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~----d~f--~~~~l~~~e~lg~~-~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~q 365 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEIN----EAF--AAQALAVEKELGLD-PEKVNVNGGAIALGHPIGASGARILVTLLHE 365 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----cHH--HHHHHHHHHHhCCC-hhhcCCCcchhhhCcchhhhHHHHHHHHHHH
Confidence 3578999999999999999998752 111 11222344567763 11221 1235567888889999999
Q ss_pred HHcCCCCEEEEE
Q 015474 152 IKAGFYDIGIGA 163 (406)
Q Consensus 152 I~sG~~d~vL~~ 163 (406)
++......+|+-
T Consensus 366 L~~~~~~~gl~~ 377 (393)
T PRK05790 366 MKRRGAKKGLAT 377 (393)
T ss_pred HHhcCCCeEEEE
Confidence 986556666654
No 202
>PLN03173 chalcone synthase; Provisional
Probab=71.53 E-value=4.8 Score=40.64 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~ 380 (406)
..|+++||+++|++++|||++-+. ..++.......+.||+.+.
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSS 153 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCcc
Confidence 479999999999999999987543 3467778889999999764
No 203
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=71.43 E-value=11 Score=36.45 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCC----CchHHHHHHHHHHHHHc
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ----CSSGLQAVADVAAAIKA 154 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~----CaSg~~Ai~~Aa~~I~s 154 (406)
...+++++|+++|++++|||.+++-+. +...-..+...+|+|......++.+- |+|-...+ ...++.
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~------~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L---~~~~~~ 297 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQA------NLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLAL---DLALEQ 297 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHH---HHHHHc
Confidence 346778999999999999999888432 23345678899999743322233222 22333333 344555
Q ss_pred CC---CCEEEEEeec
Q 015474 155 GF---YDIGIGAGLE 166 (406)
Q Consensus 155 G~---~d~vL~~G~E 166 (406)
|. -|.+|++++-
T Consensus 298 g~~~~Gd~vll~~~G 312 (325)
T PRK12879 298 GKIKPGDTLLLYGFG 312 (325)
T ss_pred CCCCCCCEEEEEEEc
Confidence 54 3577777653
No 204
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=71.24 E-value=8.5 Score=38.40 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHH-cCCC--CCCceEE----EcCCCchHHHHHHHHHH
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY-AGFP--ETVPVRT----VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~-lGl~--~~~~~~~----v~~~CaSg~~Ai~~Aa~ 150 (406)
...++++++|+++|++++|||.+++=.. +...-..+... +|++ ......+ =|.+|+|-..++..+..
T Consensus 272 ~~~~~i~~~L~~~gl~~~dId~~~~Hq~------~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~ 345 (372)
T PRK07515 272 MVAEHIVEHLAENGLTPADVKRFWLHQA------NINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSD 345 (372)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhc
Confidence 3678899999999999999999888221 12222233444 5652 2111222 25556666666666655
Q ss_pred HHHcCCCCEEEEEee
Q 015474 151 AIKAGFYDIGIGAGL 165 (406)
Q Consensus 151 ~I~sG~~d~vL~~G~ 165 (406)
.++.| |.+|.+++
T Consensus 346 ~~~~G--d~vll~~~ 358 (372)
T PRK07515 346 DLAAG--DLGVICSF 358 (372)
T ss_pred cCCCC--CEEEEEEe
Confidence 55544 66777664
No 205
>PLN03172 chalcone synthase family protein; Provisional
Probab=71.17 E-value=5.3 Score=40.36 Aligned_cols=43 Identities=21% Similarity=0.190 Sum_probs=35.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEc----cccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEI----NEAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~----hd~fa~~~l~~~e~lGl~~~ 380 (406)
..|+++||+++|++++|||++-+ ...++.......+.||+.+.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPS 153 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCC
Confidence 47999999999999999998753 33477788899999999764
No 206
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=71.06 E-value=11 Score=36.46 Aligned_cols=83 Identities=19% Similarity=0.257 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHH-HHHHHHHHHcC
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQA-VADVAAAIKAG 155 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~A-i~~Aa~~I~sG 155 (406)
+...++++++|+++|++++|||.+++-+. +...-..+...+|+|...-..++.+-+-.+... +..-...++.|
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~ 296 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA------NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEG 296 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHcC
Confidence 34567888999999999999998887432 234455688899997443322332222222222 22223445555
Q ss_pred C---CCEEEEEee
Q 015474 156 F---YDIGIGAGL 165 (406)
Q Consensus 156 ~---~d~vL~~G~ 165 (406)
. -|.+|.+++
T Consensus 297 ~~~~G~~vll~~~ 309 (320)
T cd00830 297 KLKKGDLVLLLGF 309 (320)
T ss_pred CCCCCCEEEEEEE
Confidence 3 477777764
No 207
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=70.09 E-value=4.5 Score=40.20 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccc-----cchHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd-----~fa~~~l~~~e~lGl~~ 379 (406)
..|+++||+++|++++|||++-+.- .++.......+.||+.+
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~ 111 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSS 111 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 4799999999999999999997643 34566778889999974
No 208
>PLN00415 3-ketoacyl-CoA synthase
Probab=69.84 E-value=5.1 Score=41.25 Aligned_cols=49 Identities=20% Similarity=0.329 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC--CCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNG 386 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~--~vN~~G 386 (406)
..|++++|+++|++++|||++-++ ..++.......+.||+.+. .++.+|
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~g 193 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG 193 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEecc
Confidence 358899999999999999987543 2456667788899999743 466655
No 209
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=69.77 E-value=3.8 Score=40.09 Aligned_cols=42 Identities=26% Similarity=0.381 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc--hHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f--a~~~l~~~e~lGl~~ 379 (406)
.+|+++||+++||+++|||++-+-+.. .+..-+..+.||++.
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~ 98 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPF 98 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCE
Confidence 479999999999999999999765432 123345668899744
No 210
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=69.20 E-value=24 Score=35.80 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=54.5
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
++|.|.+.+--+.+ ....+..- ..+++++||+++|++++|||.|.. |+..+. . .......+ ...+. ...|
T Consensus 261 a~I~g~~~~~d~~~----~~~p~~~~-~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~-~-D~~E~~al-~~~~~-~~~~ 331 (410)
T PRK07103 261 AKLLGWSMRLDANR----GPDPSLEG-EMRVIRAALRRAGLGPEDIDYVNPHGTGSPL-G-DETELAAL-FASGL-AHAW 331 (410)
T ss_pred EEEEEEEEecCCCC----CCCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEccCCCCCC-C-CHHHHHHH-hcCCC-CCCe
Confidence 56888776533321 11222222 357889999999999999998765 322221 1 12222222 22222 1233
Q ss_pred eEE-----EcCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VRT-----VNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+.. -....++|+..+..+...++.|.
T Consensus 332 v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ 362 (410)
T PRK07103 332 INATKSLTGHGLSAAGIVELIATLLQMRAGF 362 (410)
T ss_pred EECCCcccccCchhhhHHHHHHHHHHHhCCe
Confidence 322 34556788888888888888774
No 211
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=69.18 E-value=31 Score=35.41 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=55.7
Q ss_pred ceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC--
Q 015474 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-- 128 (406)
Q Consensus 51 ~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~-- 128 (406)
.|+|+|.+........ ...+.........+++++|+.+|++++|||.+-+--.+ ....-.....+||...
T Consensus 285 ~v~i~g~~~~~~~~~~--~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daF------a~~~l~~~e~lGl~~~G~ 356 (438)
T PTZ00455 285 LVEIKSLACASGNLYE--DPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCF------TIAELLMYEALGIAEYGH 356 (438)
T ss_pred cEEEEEEEEecCCccc--CccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccC------hHHHHHHHHHcCCCCCCc
Confidence 4889998876432110 11122223334689999999999999999988663211 2223344567787432
Q ss_pred ---------------CceEEEc--------CCCchHHHHHHHHHHHHH
Q 015474 129 ---------------VPVRTVN--------RQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 129 ---------------~~~~~v~--------~~CaSg~~Ai~~Aa~~I~ 153 (406)
.|+ +++ ..++||+.-+.+++..++
T Consensus 357 ~~~~~~~G~~~~~G~~pv-N~~GG~la~GHP~gAtG~~~v~e~~~QLr 403 (438)
T PTZ00455 357 AKDLIRNGATALEGRIPV-NTGGGLLSFGHPVGATGVKQIMEVYRQMK 403 (438)
T ss_pred hHHHHhcCCcccCCCcee-eCCCchhhcCCCcchHHHHHHHHHHHHHh
Confidence 122 221 234667777777877776
No 212
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=69.08 E-value=16 Score=37.29 Aligned_cols=45 Identities=31% Similarity=0.361 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc---ccch---HHHHHHHHHcCCCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN---EAFA---SQFVYCRNKLGLDPEKI 382 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h---d~fa---~~~l~~~e~lGl~~~~v 382 (406)
..|++.||+++||+++|||.+-.. +.+. .......+.||+.+.+.
T Consensus 42 ~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~ 92 (430)
T PRK06365 42 KKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPS 92 (430)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCce
Confidence 478999999999999999987543 2222 12234568899987553
No 213
>PRK08304 stage V sporulation protein AD; Validated
Probab=68.68 E-value=4.1 Score=39.99 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc--hHHHHHHHHHcCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 378 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f--a~~~l~~~e~lGl~ 378 (406)
.+|+++||+++||+++|||++-.-+.. .+...+..+.||++
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIP 103 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIP 103 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCc
Confidence 579999999999999999999664332 22344566888874
No 214
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=68.61 E-value=30 Score=34.73 Aligned_cols=96 Identities=9% Similarity=-0.007 Sum_probs=54.7
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 129 (406)
..|+|.|.+..--..... .. +.....-...+++++|+++|++|+|||.+-+--.. ....-.....+||.+..
T Consensus 235 ~~v~i~g~~~~~~~~~~~-~~-~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f------~~~~~~~~e~lg~~~~G 306 (389)
T PRK07516 235 RAVRFRARAHVNDFLPLS-RR-DPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCF------TIAELIEYEAMGLAPPG 306 (389)
T ss_pred CCEEEEEEEeccCccccc-CC-CccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCC------CHHHHHHHHHcCCCCCC
Confidence 457888887642211110 11 21122445679999999999999999988663211 22233445667774321
Q ss_pred -----------------ceEE-------EcCCCchHHHHHHHHHHHHH
Q 015474 130 -----------------PVRT-------VNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 130 -----------------~~~~-------v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
|+.+ -...++||..-+.+++..++
T Consensus 307 ~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~ 354 (389)
T PRK07516 307 QGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLT 354 (389)
T ss_pred chHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhc
Confidence 2221 11233567777778888776
No 215
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=68.31 E-value=54 Score=33.10 Aligned_cols=71 Identities=10% Similarity=-0.041 Sum_probs=39.8
Q ss_pred CceEEEEeeecccccCCCCCCCCCCHHHH--HHHHHHHHHHHcCCC--CCCCCeEEEEeecCCCCCCccHHHHHHHHcCC
Q 015474 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDL--LAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (406)
Q Consensus 50 ~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L--~~~A~~~AL~dAgl~--~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl 125 (406)
+.|+|.|++..--.. +.....+..+..+ ...+++++++++||+ ++|||.+-+--. + ....-...+.+||
T Consensus 238 ~~v~I~g~~~~~~~~-~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~----F--s~~~l~~~e~lGl 310 (398)
T PRK06157 238 DPVYVKALQLAVSNG-WELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDC----F--SITELVTMEDLGL 310 (398)
T ss_pred CCeEEEEEEEecccc-cccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecC----C--hHHHHHHHHHcCC
Confidence 568899987641110 0000111222222 557889999999997 699998766221 1 2223344567777
Q ss_pred CC
Q 015474 126 PE 127 (406)
Q Consensus 126 ~~ 127 (406)
.+
T Consensus 311 ~~ 312 (398)
T PRK06157 311 SE 312 (398)
T ss_pred CC
Confidence 43
No 216
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=68.22 E-value=31 Score=35.16 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=57.6
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCc
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVP 130 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~ 130 (406)
..|+|.+.+-=+.+. ...+.. ..-..+++++||+++|++++|||.|.. |+..+. . .......+...+|-. ..+
T Consensus 264 a~i~g~~~~~dg~~~--~~~~~~-~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~-D~~E~~Al~~~fg~~-~~~ 337 (418)
T PRK07910 264 ARIMGASITSDGFHM--VAPDPN-GERAGHAMTRAIELAGLTPGDIDHVNAHATGTSV-G-DVAEGKAINNALGGH-RPA 337 (418)
T ss_pred EEEEEEEEecCCCCC--CCCCCC-HHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCC-C-CHHHHHHHHHHhCCC-CCc
Confidence 357777665433221 111222 233578899999999999999999864 332221 1 234566666777741 222
Q ss_pred eE-----EEcCCCchHHHHHHHHHHHHHcCC
Q 015474 131 VR-----TVNRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 131 ~~-----~v~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
+. .=...+++|...+..+...++.|.
T Consensus 338 v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ 368 (418)
T PRK07910 338 VYAPKSALGHSVGAVGAVESILTVLALRDGV 368 (418)
T ss_pred eeCccccccccHHHHHHHHHHHHHHHHhcCc
Confidence 32 223455677777777777777663
No 217
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=68.20 E-value=13 Score=39.35 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCceE-----EEcCCCchHHHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPVR-----TVNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~~~-----~v~~~CaSg~~Ai~~Aa~~I 152 (406)
...++++||+++|++|+|||.|.. |+..+.. .......+...+|-....|+. .=...+++|...+..+...|
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g--D~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal 484 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG--DLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAI 484 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC--CHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHH
Confidence 467899999999999999998764 3332221 234455556666532123333 22456778888888888888
Q ss_pred HcCC
Q 015474 153 KAGF 156 (406)
Q Consensus 153 ~sG~ 156 (406)
+.|.
T Consensus 485 ~~g~ 488 (540)
T PLN02787 485 RTGW 488 (540)
T ss_pred hcCC
Confidence 8876
No 218
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=67.48 E-value=5.9 Score=35.98 Aligned_cols=58 Identities=16% Similarity=0.317 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCc----cHHHHHHHHcCCCCCCceEEEc
Q 015474 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVN 135 (406)
Q Consensus 73 ~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~----~~a~~va~~lGl~~~~~~~~v~ 135 (406)
....+.....++++|++++++++|||.|+++..-++.. |- ..++-++..++ .|++.|+
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfT-GlRig~~~akgla~~~~----~p~~~vs 92 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFT-GLRIGLATAKGLALALG----IPLVGVS 92 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH-hHHHHHHHHHHHHHHhC----CCEEecC
Confidence 35678888899999999999999999999976433322 21 23444444444 4566554
No 219
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=66.97 E-value=0.57 Score=47.33 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHH---HHHHHHHHHcCCCcccc
Q 015474 195 PMGVTSENVAHRFGVTRKEQDQAAVDS---HRKAAAATAAGKFKDEI 238 (406)
Q Consensus 195 ~~g~~a~~~~~~~g~sre~~~~~a~~s---~~~A~~~~~ag~~~~ei 238 (406)
.+++...+|+++||+++|++..+++++ |.++.+||.+ +|++++
T Consensus 146 ~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a-~~~~~~ 191 (393)
T cd00826 146 LAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYI-QFGDEA 191 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCC-CCCCCC
Confidence 567778999999999999999999998 7889999998 665544
No 220
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=66.87 E-value=17 Score=36.22 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE-------EcCCCchHHHHHHHHHH
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-------VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~-------v~~~CaSg~~Ai~~Aa~ 150 (406)
-...+++++|+++|++++|||.+.+-... ..........+|++. .|+.. .+...+||..-+.++..
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~eaf------a~~~~~~~e~lgl~~-~~vn~~GG~la~Ghp~GatG~~~~~~~~~ 331 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEAF------ASKVVACAKELQIPY-EKLNVNGGAIALGHPYGASGAMLVTRLFY 331 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecchh------HHHHHHHHHhcCCCc-hhcccCCcHHhccCchhhhHHHHHHHHHH
Confidence 45678899999999999999998762211 122233446788853 22211 23556778888888888
Q ss_pred HHHcCCCCEEE
Q 015474 151 AIKAGFYDIGI 161 (406)
Q Consensus 151 ~I~sG~~d~vL 161 (406)
.++.-....+|
T Consensus 332 ql~~~~~~~g~ 342 (361)
T PRK06690 332 QAKREDMKYGI 342 (361)
T ss_pred HHHHhCCCEEE
Confidence 87654444444
No 221
>PRK09051 beta-ketothiolase; Provisional
Probab=66.81 E-value=36 Score=34.37 Aligned_cols=96 Identities=8% Similarity=0.013 Sum_probs=57.1
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|+|.+...... +.. ..-...+++++|+++|++++|||.+-+- +.+ ..........+|+.. .|+
T Consensus 275 ~~I~g~~~~~~~~-------~~~-~~~~~~a~~~al~~agi~~~did~~ei~----d~f--~~~~~~~~e~lg~~~-~~v 339 (394)
T PRK09051 275 ARLVGYAHAGVDP-------EYM-GIGPVPATQKALERAGLTVADLDVIEAN----EAF--AAQACAVTRELGLDP-AKV 339 (394)
T ss_pred EEEEEEEEeccCC-------Ccc-cccHHHHHHHHHHHcCCCHHHcCEEEec----Ccc--HHHHHHHHHHhCCCc-ccc
Confidence 3677777654321 111 1123678899999999999999998762 111 223344556788732 222
Q ss_pred EE-------EcCCCchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 132 RT-------VNRQCSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 132 ~~-------v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
-. =+..++||..-+.++...++......+|+
T Consensus 340 N~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~~ 377 (394)
T PRK09051 340 NPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALV 377 (394)
T ss_pred CCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 11 12345678888888888887544444443
No 222
>PLN02854 3-ketoacyl-CoA synthase
Probab=65.55 E-value=5.5 Score=41.68 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCCCCCCccEEEcc----ccchHHHHHHHHHcCCCCC--CCCCCC
Q 015474 339 VAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNG 386 (406)
Q Consensus 339 ~A~~~al~~AGl~~~DID~~e~h----d~fa~~~l~~~e~lGl~~~--~vN~~G 386 (406)
.+++++|+++|++++|||++-++ .++++......+.||+.++ .+|.+|
T Consensus 194 ~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg 247 (521)
T PLN02854 194 GALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG 247 (521)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc
Confidence 58899999999999999999764 2456677788899999643 466654
No 223
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.31 E-value=33 Score=34.71 Aligned_cols=95 Identities=14% Similarity=0.230 Sum_probs=56.4
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
.|.|.+.+--+.+ +...+ .+-...+++++|++++++++|||.|.. |+..+.. .....+.+...+|- ..|+
T Consensus 256 ~i~g~~~~~d~~~----~~~p~-~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~--D~~E~~Ai~~~fg~--~~pv 326 (405)
T PRK09116 256 EIVGFGTNSDGAH----VTQPQ-AETMQIAMELALKDAGLAPEDIGYVNAHGTATDRG--DIAESQATAAVFGA--RMPI 326 (405)
T ss_pred EEEEEEEcCCCCc----CCCCC-HHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC--CHHHHHHHHHHhCC--CCee
Confidence 4777776543321 11112 234468889999999999999998864 4333222 24456666666663 3344
Q ss_pred EEE-----cCCCchHHHHHHHHHHHHHcCC
Q 015474 132 RTV-----NRQCSSGLQAVADVAAAIKAGF 156 (406)
Q Consensus 132 ~~v-----~~~CaSg~~Ai~~Aa~~I~sG~ 156 (406)
..+ ...+++|..-+..+...|+.|.
T Consensus 327 ~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ 356 (405)
T PRK09116 327 SSLKSYFGHTLGACGALEAWMSIEMMNEGW 356 (405)
T ss_pred ECcchhhcccHHHHHHHHHHHHHHHHHcCc
Confidence 332 2345566666666677777665
No 224
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=65.08 E-value=19 Score=34.84 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCc-hHHHHHHHHHHHHHcCC-
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCS-SGLQAVADVAAAIKAGF- 156 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Ca-Sg~~Ai~~Aa~~I~sG~- 156 (406)
..++++++|+++|++++|||.++.-+. +...-..++..+|+|...-..++..-+- ++..-+..-...++.|.
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~~g~~ 294 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQA------NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRDGRI 294 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHHcCCC
Confidence 456788899999999999999887322 2345567888999974322222211111 12222233344455554
Q ss_pred --CCEEEEEee
Q 015474 157 --YDIGIGAGL 165 (406)
Q Consensus 157 --~d~vL~~G~ 165 (406)
-|.+|++++
T Consensus 295 ~~Gd~vll~s~ 305 (319)
T PRK09352 295 KRGDLVLLEGF 305 (319)
T ss_pred CCCCEEEEEEE
Confidence 367777764
No 225
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=63.93 E-value=34 Score=34.59 Aligned_cols=96 Identities=10% Similarity=0.055 Sum_probs=55.1
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|+|.+.+.... +.... -...+++++|+++|++++|||.+-+. +.+ ..........+|+. ..|+
T Consensus 280 a~i~g~~~~~~~~-------~~~~~-~~~~A~~~al~~Agi~~~did~~ei~----D~f--~~~~l~~~e~lg~~-~~~v 344 (399)
T PRK09052 280 ARFVSFAVAGVPP-------EIMGI-GPIEAIPAALKQAGLKQDDLDWIELN----EAF--AAQSLAVIRDLGLD-PSKV 344 (399)
T ss_pred EEEEEEEEeccCC-------Cccch-hHHHHHHHHHHHcCCCHHHcCEEEeC----cHH--HHHHHHHHHHhCCC-Cccc
Confidence 3688877763221 11111 33678999999999999999998742 111 12233445667873 2222
Q ss_pred EE-------EcCCCchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 132 RT-------VNRQCSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 132 ~~-------v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
.. =+...+||..-+...+..++......+|+
T Consensus 345 N~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~~~g~~ 382 (399)
T PRK09052 345 NPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMV 382 (399)
T ss_pred CCCCchhhcCchHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 11 12234566666777777777654444443
No 226
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=61.12 E-value=31 Score=34.79 Aligned_cols=96 Identities=11% Similarity=0.059 Sum_probs=55.7
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|+|.+...... +... .-...+++++|+++|++++|||.+-+.-.. ....-.....+|+.. .|+
T Consensus 272 ~~i~g~~~~~~~~-------~~~~-~~~~~a~~~al~~agl~~~did~~ei~d~f------~~~~l~~~e~lg~~~-~~v 336 (391)
T PRK07661 272 AKFRSFAVAGVPP-------EVMG-IGPIAAIPKALKLAGLELSDIGLFELNEAF------ASQSIQVIRELGLDE-EKV 336 (391)
T ss_pred EEEEEEEEecCCC-------cccc-hHHHHHHHHHHHHcCCCHHHCCEEEeCCHH------HHHHHHHHHHcCCCC-CCC
Confidence 3677777653211 1111 234678999999999999999998853211 111222234678731 111
Q ss_pred E-------EEcCCCchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 132 R-------TVNRQCSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 132 ~-------~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
. .=+...+||..-+.+++..++......+|+
T Consensus 337 N~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~ 374 (391)
T PRK07661 337 NVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIV 374 (391)
T ss_pred CCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 1 113345678888888888887544444443
No 227
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=59.79 E-value=23 Score=36.14 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCC--------CchHHHHHHHHHHH
Q 015474 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ--------CSSGLQAVADVAAA 151 (406)
Q Consensus 80 ~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~--------CaSg~~Ai~~Aa~~ 151 (406)
..+++++|+++|++++|||.+.+-... ..........+|++. .++ +++.+ .+||...+.+++..
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~eaF------a~~~l~~~~~lg~~~-~~v-N~~GG~ia~GHp~GaTGa~~v~~ll~q 389 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEAF------AVVAEKFIRDLDLDR-DKV-NVNGGAIALGHPIGATGSILIGTVLDE 389 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchHH------HHHHHHHHHHcCCCh-hhc-cccCCHHhcCCchhHHHHHHHHHHHHH
Confidence 478899999999999999998863211 122234556778753 232 33333 56777777666666
Q ss_pred HHc
Q 015474 152 IKA 154 (406)
Q Consensus 152 I~s 154 (406)
++.
T Consensus 390 L~~ 392 (417)
T PRK06025 390 LER 392 (417)
T ss_pred HHH
Confidence 643
No 228
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=57.45 E-value=13 Score=37.44 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcccc-----chHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~-----fa~~~l~~~e~lGl~~ 379 (406)
..|++++|+++||+++|||.+-+... .........+.||+.+
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~ 73 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPE 73 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCC
Confidence 47999999999999999998864321 1222334567899875
No 229
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=56.93 E-value=22 Score=29.66 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE--------cCCCchHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV--------NRQCSSGLQAVADVAA 150 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v--------~~~CaSg~~Ai~~Aa~ 150 (406)
...|++++|+++|++++|||.+=+--. + ....-.....+|++. .++ ++ ....+||..-+.+.+.
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----F--A~~~l~~~~~lg~~~-~~v-N~~GG~la~GHP~gasG~r~~~~l~~ 95 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----F--AAQVLAFLEALGLDP-EKV-NPNGGALALGHPLGASGARLVVELAH 95 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----B--HHHHHHHHHHHTTGG-GGB-STT--HHHH-BHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----h--hhHHHHhhccccccc-ccc-CcccccccccccccccccchhhhhHH
Confidence 367899999999999999998877321 1 222334456678742 211 11 1234688888888888
Q ss_pred HHHcCCCCEEEEE
Q 015474 151 AIKAGFYDIGIGA 163 (406)
Q Consensus 151 ~I~sG~~d~vL~~ 163 (406)
.++....+..++.
T Consensus 96 ~L~~~~~~~gla~ 108 (123)
T PF02803_consen 96 QLRRRGGRYGLAA 108 (123)
T ss_dssp HHHHHTTSEEEEE
T ss_pred HHHHhchhhhhHH
Confidence 8877656665543
No 230
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=56.91 E-value=7.6 Score=37.03 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC---CCccHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~---~~~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+.....++++|++++++++|||.|.++..-+... -|...++.++..+++ |++.|+.
T Consensus 28 ~H~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~----Pli~v~~ 89 (268)
T PF00814_consen 28 QHSENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNI----PLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEEH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCC----CeEeecc
Confidence 4577788999999999999999999999976532221 012234555555554 6777754
No 231
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=56.69 E-value=74 Score=32.03 Aligned_cols=78 Identities=12% Similarity=-0.001 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE-------EcCCCchHHHHHHHHHH
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-------VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~-------v~~~CaSg~~Ai~~Aa~ 150 (406)
-...+++++|+.+|++++|||.+-+--.+ ....-.....+|+.. .|+-+ -....+||+..+.+++.
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d~F------~~~~l~~~e~lg~~~-~pvN~~GG~la~Ghp~gatG~~~v~e~~~ 358 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINEAF------ASVVLSWAQVHEPDM-DKVNVNGGAIALGHPVGSTGARLITTALH 358 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecccc------hHHHHHHHHHcCCCC-CCcCCCCchhhcCCCcchhHHHHHHHHHH
Confidence 34688999999999999999998772211 112223335677632 12211 12445678889999999
Q ss_pred HHHcCCCCEEEE
Q 015474 151 AIKAGFYDIGIG 162 (406)
Q Consensus 151 ~I~sG~~d~vL~ 162 (406)
.++......+|+
T Consensus 359 qL~~~~~~~g~~ 370 (387)
T PRK07850 359 ELERTDKSTALI 370 (387)
T ss_pred HHHhcCCCeEEE
Confidence 997654444444
No 232
>PRK06059 lipid-transfer protein; Provisional
Probab=55.02 E-value=53 Score=33.09 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCC-----------------ceEE-------E
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-----------------PVRT-------V 134 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-----------------~~~~-------v 134 (406)
...+++++++.+|++++|||.+-+--.. ....-...+.+||.+.. |+.+ =
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d~f------~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~G 348 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYDLS------TALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFG 348 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeecccC------hHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCC
Confidence 3567899999999999999988663211 11222233677874321 2211 1
Q ss_pred cCCCchHHHHHHHHHHHHHc
Q 015474 135 NRQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 135 ~~~CaSg~~Ai~~Aa~~I~s 154 (406)
....+||+..+.+++..++-
T Consensus 349 hp~gatG~~~~~e~~~qLrg 368 (399)
T PRK06059 349 EAIPAQAIAQVCELTWQLRG 368 (399)
T ss_pred ccCCccHHHHHHHHHHHhcc
Confidence 12335788888889988873
No 233
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=53.98 E-value=38 Score=34.28 Aligned_cols=78 Identities=13% Similarity=0.162 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC--CceEEEc--------CCCchHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET--VPVRTVN--------RQCSSGLQAVADV 148 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~--~~~~~v~--------~~CaSg~~Ai~~A 148 (406)
...+++++|+++||+++|||.+-+--.+ ....-.....+||... .+ ++++ ...+||+.-+.++
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d~f------~~~~l~~~e~lg~~~~~~~~-vN~~GG~la~Ghp~gatG~~~v~e~ 372 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNEAF------AAQVLAVLKEWGFGADDEER-LNVNGSGISLGHPVGATGGRILATL 372 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeeccHH------HHHHHHHHHHhCcCcccCCC-cCCCCCHHhhCCChhhhHHHHHHHH
Confidence 3678999999999999999998752211 1112233456776421 12 1222 3346788888888
Q ss_pred HHHHHcCCCCEEEEE
Q 015474 149 AAAIKAGFYDIGIGA 163 (406)
Q Consensus 149 a~~I~sG~~d~vL~~ 163 (406)
+..++......+|+-
T Consensus 373 ~~qL~~~~~~~gl~~ 387 (404)
T PRK06205 373 LRELQRRQARYGLET 387 (404)
T ss_pred HHHHHhcCCCeEEEE
Confidence 888876555666654
No 234
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=53.76 E-value=15 Score=35.73 Aligned_cols=58 Identities=26% Similarity=0.278 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCC----ccHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR----ASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~----~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+.....++++|+++|++++|||.|.++..-+... + ...++.++..+++ |++.|+.
T Consensus 47 ~H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~t-glrvg~~~Ak~la~~~~~----p~~~v~h 108 (305)
T TIGR00329 47 HHAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGG-SLRVGATFARSLALSLDK----PLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchh-hHHHHHHHHHHHHHHhCC----CEeeccc
Confidence 3577778889999999999999999999976433222 2 2335566666655 5555544
No 235
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.28 E-value=26 Score=35.74 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC-CCCceEE-----EcCCCchHHHHHHHHHH
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP-ETVPVRT-----VNRQCSSGLQAVADVAA 150 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~-~~~~~~~-----v~~~CaSg~~Ai~~Aa~ 150 (406)
-...+++++|+++|++++|||.+.. |+..+. . .......+...+|-. ...|+.. =....++|+..+..++.
T Consensus 290 ~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~-d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTPEQIDYINAHGTSTPE-N-DKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCccCcc-h-HHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHH
Confidence 3567889999999999999999875 332221 1 233344444444421 1233332 23445678878887888
Q ss_pred HHHcCC
Q 015474 151 AIKAGF 156 (406)
Q Consensus 151 ~I~sG~ 156 (406)
.++.|.
T Consensus 368 ~l~~~~ 373 (425)
T PRK06501 368 TIQTGR 373 (425)
T ss_pred HHhcCc
Confidence 888876
No 236
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=52.79 E-value=19 Score=36.77 Aligned_cols=42 Identities=21% Similarity=0.145 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc-----hHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f-----a~~~l~~~e~lGl~~ 379 (406)
..|++++|+++||+++|||.+-+...+ ........+.+|++.
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~ 78 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGE 78 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCC
Confidence 479999999999999999977653222 122244567899963
No 237
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=51.54 E-value=46 Score=33.76 Aligned_cols=96 Identities=10% Similarity=0.074 Sum_probs=53.9
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
++|.|.+..... . +..... ...++++||+++|++++|||.+-+ .+.+ ....-...+.+|+.. .|+
T Consensus 286 a~I~g~~~~~~~----~---~~~~~~-~~~a~~~al~~Agi~~~did~~ei----~d~f--~~~~l~~le~lg~~~-~pv 350 (406)
T PRK07851 286 ARIVSTGVSGLS----P---EIMGLG-PVEASKQALARAGMSIDDIDLVEI----NEAF--AAQVLPSARELGIDE-DKL 350 (406)
T ss_pred EEEEEEEEccCC----C---Cccchh-HHHHHHHHHHHhCCCHHHCCeehh----hhHH--HHHHHHHHHHhCCCc-ccc
Confidence 578887764221 1 111111 457899999999999999998843 1110 111222335677731 121
Q ss_pred E-------EEcCCCchHHHHHHHHHHHHHcCCCCEEEE
Q 015474 132 R-------TVNRQCSSGLQAVADVAAAIKAGFYDIGIG 162 (406)
Q Consensus 132 ~-------~v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~ 162 (406)
. .=....+||+..+.+....++......+|+
T Consensus 351 N~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~ 388 (406)
T PRK07851 351 NVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLE 388 (406)
T ss_pred CCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 1 112335677778888888886544445544
No 238
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=51.37 E-value=43 Score=33.81 Aligned_cols=77 Identities=18% Similarity=0.163 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE------E-EcCCCchHHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR------T-VNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~------~-v~~~CaSg~~Ai~~Aa~~ 151 (406)
...+++++|+++||+++|||.+-+. +.+ ..........+|+.. .|+. . =+...+||..-+.+++..
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~----d~f--~~~~l~~~e~lg~~~-~pvN~~GG~la~Ghp~gasG~~~~~~l~~q 365 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN----EAF--AAVALASTEIAGIDP-EKVNVNGGAVALGHPIGASGARIIVTLIHE 365 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc----chh--HHHHHHHHHHhCCCc-ccCCcCCchHHhCCcHHHHHHHHHHHHHHH
Confidence 4579999999999999999998642 111 122334446778731 2221 1 124457788888888888
Q ss_pred HHcCCCCEEEE
Q 015474 152 IKAGFYDIGIG 162 (406)
Q Consensus 152 I~sG~~d~vL~ 162 (406)
++....+..|+
T Consensus 366 L~~~~~~~g~~ 376 (393)
T PRK08235 366 LKRRGGGIGIA 376 (393)
T ss_pred HHhcCCCeEEE
Confidence 87433344443
No 239
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=50.26 E-value=46 Score=33.78 Aligned_cols=75 Identities=13% Similarity=0.101 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc--------CCCchHHHHHHHHHHH
Q 015474 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN--------RQCSSGLQAVADVAAA 151 (406)
Q Consensus 80 ~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~--------~~CaSg~~Ai~~Aa~~ 151 (406)
..+++++|+++|++++|||.+-+.-. + ....-.....+|++. .|+ +++ ...+||..-+...+..
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~da----F--a~~~l~~~e~lG~~~-~~v-N~~GG~la~GHP~GAsG~~~~~~l~~~ 374 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNEA----F--ASVVLRFMQALDIPH-DKV-NVNGGAIAMGHPLGATGAMILGTVLDE 374 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecch----h--hHHHHHHHHHhCCCC-cCC-CcCCCHHhcCCcHHHHHHHHHHHHHHH
Confidence 46899999999999999999886211 1 122233456778742 221 222 3346777777777777
Q ss_pred HHcCCCCEEEE
Q 015474 152 IKAGFYDIGIG 162 (406)
Q Consensus 152 I~sG~~d~vL~ 162 (406)
++......+|+
T Consensus 375 L~~~~~~~g~~ 385 (402)
T PRK08242 375 LERRGKRTALI 385 (402)
T ss_pred HHhcCCCeEEE
Confidence 76544444443
No 240
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=49.48 E-value=42 Score=33.83 Aligned_cols=78 Identities=12% Similarity=0.087 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE-------EEcCCCchHHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-------TVNRQCSSGLQAVADVAAA 151 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~-------~v~~~CaSg~~Ai~~Aa~~ 151 (406)
...+++++|+++|++++|||.+-+- +.+ ..........+|++. .|+. .=....+||..-+.+++..
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~----d~f--~~~~~~~~e~lg~~~-~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~ 365 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEAN----EAF--AAQSLAVGKELGWDA-AKVNVNGGAIALGHPIGASGCRVLVTLLHE 365 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----Ccc--HHHHHHHHHHhCCCC-ccCCcCCCHHHhCccHHHHHHHHHHHHHHH
Confidence 3578999999999999999998862 111 223334456677631 1111 1123346677667777777
Q ss_pred HHcCCCCEEEEE
Q 015474 152 IKAGFYDIGIGA 163 (406)
Q Consensus 152 I~sG~~d~vL~~ 163 (406)
.+.-....+|+-
T Consensus 366 l~~~~~~~gl~~ 377 (393)
T PRK05656 366 MIRRDAKKGLAT 377 (393)
T ss_pred HHHcCCCEEEEE
Confidence 654445555543
No 241
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=49.24 E-value=1.7e+02 Score=29.44 Aligned_cols=98 Identities=9% Similarity=0.041 Sum_probs=57.3
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC--C
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET--V 129 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~--~ 129 (406)
+.|+|.+..... ...... -...+++++|+++|++++|||.+-+--. + ....-...+.+||.+. .
T Consensus 265 ~~I~g~~~~~~~----~~~~~~----~~~~a~~~al~~Agl~~~DId~~El~d~----F--~~~~l~~~e~lg~~~~~~~ 330 (387)
T PRK08947 265 ARIRSMAVAGCD----PSIMGY----GPVPATQKALKRAGLSISDIDVFELNEA----F--AAQSLPCLKDLGLLDKMDE 330 (387)
T ss_pred EEEEEEEEcCcC----cccccc----cHHHHHHHHHHHcCCCHHHCCEEEeccc----c--hHHHHHHHHHcCCCCCCCC
Confidence 678888765211 111111 1357889999999999999999876221 1 2223344467787221 1
Q ss_pred ceEE-------EcCCCchHHHHHHHHHHHHHcCCCCEEEEE
Q 015474 130 PVRT-------VNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (406)
Q Consensus 130 ~~~~-------v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~ 163 (406)
|+.+ -+..++||..-+...+..++.-...++|+-
T Consensus 331 ~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~ 371 (387)
T PRK08947 331 KVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLAT 371 (387)
T ss_pred CcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEE
Confidence 2111 123457788888888888865445566543
No 242
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=48.90 E-value=20 Score=35.07 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCc----cHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~----~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+.+...++++|+++++++++||.|.++..-+... +- ..++.++..+++ |++.|+.
T Consensus 48 ~H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsft-glrig~~~Ak~la~~~~~----p~~~v~h 109 (314)
T TIGR03723 48 AHLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIG-ALLVGVSFAKALALALNK----PLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH-hHHHHHHHHHHHHHHhCC----CEEeccc
Confidence 4577788899999999999999999999976433222 22 345555555555 5666644
No 243
>PRK14878 UGMP family protein; Provisional
Probab=48.35 E-value=28 Score=34.10 Aligned_cols=57 Identities=19% Similarity=0.307 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC---CCccHHHHHHHHcCCCCCCceEEEcC
Q 015474 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~---~~~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
.+....+++++|+++|++++|||.|.++..-+... -|...++.++..++. |+..|+.
T Consensus 45 ~~~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~----p~~~v~h 104 (323)
T PRK14878 45 AEVAPELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK----PLVPVNH 104 (323)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC----Cccccch
Confidence 44556899999999999999999999976422221 012336667777666 4555544
No 244
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=46.26 E-value=26 Score=34.24 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC---CCccHHHHHHHHcCCCCCCceEEEcC
Q 015474 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 76 ~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~---~~~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
.+.....++++|+.+|++++|||.|.+...-+... -+...++.++..+++ |++.|+.
T Consensus 46 ~~~l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~----p~~~v~h 105 (322)
T TIGR03722 46 AEVAPKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK----PLVGVNH 105 (322)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC----Ceechhh
Confidence 44456679999999999999999999976322111 012235666666665 4555544
No 245
>PRK09604 UGMP family protein; Validated
Probab=46.00 E-value=25 Score=34.63 Aligned_cols=58 Identities=14% Similarity=0.169 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCC----ccHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR----ASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~----~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+.+...++++|+++|+++++||.|+++..-+... + ...++.++..+++ |.+.|+.
T Consensus 50 ~H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~t-glrvg~~~Ak~La~~~~i----pl~~v~h 111 (332)
T PRK09604 50 AHVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVG-ALLVGVSFAKALALALNK----PLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHH-hHHHHHHHHHHHHHHhCC----CEEeecC
Confidence 3577788899999999999999999999976432221 2 2335556666555 5665554
No 246
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=44.71 E-value=46 Score=32.91 Aligned_cols=82 Identities=16% Similarity=0.015 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHc--CCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce---EE----EcCCCchHHHHHHHH
Q 015474 78 LLAPVLKAVIEKT--NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV---RT----VNRQCSSGLQAVADV 148 (406)
Q Consensus 78 L~~~A~~~AL~dA--gl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~---~~----v~~~CaSg~~Ai~~A 148 (406)
...++++++|+++ |++++|||.+++=+. +...-..+...+|++...-. .+ =|..++|-..+|..+
T Consensus 260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~~------~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 260 NLERVLRKLLARLGIGLFKLAFDHWCVHPG------GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred HHHHHHHHHhccccCCCccccceEEEECCC------ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence 4556788889999 999999998887321 23345568888999643211 11 244444555555555
Q ss_pred HHHHHcCCCCEEEEEee
Q 015474 149 AAAIKAGFYDIGIGAGL 165 (406)
Q Consensus 149 a~~I~sG~~d~vL~~G~ 165 (406)
.+.-+...-|.+|.+++
T Consensus 334 ~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 334 EAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 43211113477887765
No 247
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=41.56 E-value=42 Score=33.12 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC----CCccHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS----QRASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~----~~~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+-....++++|++||++.+|||.|.+-.. |... -|.+.++.++..++. |.+-||.
T Consensus 49 ~H~e~i~~li~~al~eA~~~~~dID~IA~T~g-PGL~gaL~VG~~~Ak~LA~a~~k----Pli~VnH 110 (342)
T COG0533 49 HHVENIPPLIEEALAEAGVSLEDIDAIAVTAG-PGLGGALLVGATAAKALALALNK----PLIPVNH 110 (342)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCEEEEecC-CCchhHHHHHHHHHHHHHHHhCC----CEeecch
Confidence 34566778899999999999999999998442 2222 023457777777666 5666655
No 248
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=41.49 E-value=31 Score=34.25 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC---CCccHHHHHHHHcCCCCCCceEEEcC
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGFPETVPVRTVNR 136 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~---~~~~~a~~va~~lGl~~~~~~~~v~~ 136 (406)
...+.....++++|+++|++++|||.|.+...-+... -|...++-++..++. |.+-|+.
T Consensus 48 ~H~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~----PligV~H 109 (345)
T PTZ00340 48 HHREHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGK----PLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCC----CEeecch
Confidence 4567778889999999999999999999865322211 012346666666665 5665554
No 249
>PLN02287 3-ketoacyl-CoA thiolase
Probab=41.34 E-value=69 Score=33.05 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHH-HHHHHHcCCCCCCceE-------EEcCCCchHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASEC-RMAAFYAGFPETVPVR-------TVNRQCSSGLQAVADVAA 150 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a-~~va~~lGl~~~~~~~-------~v~~~CaSg~~Ai~~Aa~ 150 (406)
...+++++|+++||+++|||.+-+- + .+... -.....+|+.. .|+. .-+...+||..-+.+++.
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----d---aFa~~~l~~~e~lG~~~-~pvN~sGG~la~GHp~gAsG~~~v~~l~~ 404 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----E---AFASQFVYCCKKLGLDP-EKVNVNGGAIALGHPLGATGARCVATLLH 404 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----c---hHHHHHHHHHHHcCCCc-cccCCCCcHHhccCcHHHHHHHHHHHHHH
Confidence 4678999999999999999998542 1 11111 12235678731 2221 123446788888888888
Q ss_pred HHHc
Q 015474 151 AIKA 154 (406)
Q Consensus 151 ~I~s 154 (406)
.++.
T Consensus 405 qL~~ 408 (452)
T PLN02287 405 EMKR 408 (452)
T ss_pred HHHh
Confidence 8864
No 250
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=41.28 E-value=92 Score=31.40 Aligned_cols=78 Identities=17% Similarity=0.114 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEc--------CCCchHHHHHHHH
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN--------RQCSSGLQAVADV 148 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~--------~~CaSg~~Ai~~A 148 (406)
.....+++++|+++|++++|||.+-+-..+ ....-.....+||+. .| ++++ ...+||..-+...
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d~F------a~~~l~~~e~lG~~~-~p-vN~~GG~la~Ghp~gatG~r~~~~l 359 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNEAF------ASVPLAWLKATGADP-ER-LNVNGGAIALGHPLGASGTKLMTTL 359 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecccc------hHHHHHHHHHhCCCC-CC-cCCCCcHHhcCCCcchhHHHHHHHH
Confidence 344568999999999999999998663211 222334457789853 23 2222 2234565556667
Q ss_pred HHHHHcCCCCEEEE
Q 015474 149 AAAIKAGFYDIGIG 162 (406)
Q Consensus 149 a~~I~sG~~d~vL~ 162 (406)
+..++.-..+.+|+
T Consensus 360 ~~~lr~~~~~~gl~ 373 (390)
T PRK06504 360 VHALKQRGKRYGLQ 373 (390)
T ss_pred HHHHHhhCCCeEEE
Confidence 77776544555543
No 251
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=41.04 E-value=1.1e+02 Score=30.90 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=50.9
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCce
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~ 131 (406)
+.|+|.+.+.... .... .-...+++++|+++||+++|||.+-+--. + ....-.....+|+.....-
T Consensus 279 ~~i~g~~~~~~~~-------~~~~-~~~~~a~~~a~~~agl~~~did~~ei~d~----F--a~~~l~~~e~lg~~~~~~~ 344 (401)
T PRK08131 279 ARILSSAAAGVEP-------RIMG-IGPVEAIKKALARAGLTLDDMDIIEINEA----F--ASQVLGCLKGLGVDFDDPR 344 (401)
T ss_pred EEEEEEEEeccCC-------cccc-chHHHHHHHHHHHcCCCHHHCCeehhccH----H--HHHHHHHHHHcCCCCCCCC
Confidence 3688877664321 1111 23467899999999999999998875211 1 1112223456776211111
Q ss_pred EEEc--------CCCchHHHHHHHHHHHHHc
Q 015474 132 RTVN--------RQCSSGLQAVADVAAAIKA 154 (406)
Q Consensus 132 ~~v~--------~~CaSg~~Ai~~Aa~~I~s 154 (406)
++.+ ...+||..-+.+++..++.
T Consensus 345 vN~~GG~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 345 VNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred ccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 1222 2346777778888888764
No 252
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=40.75 E-value=78 Score=31.82 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEE--------cCCCchHHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV--------NRQCSSGLQAVADVAA 150 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v--------~~~CaSg~~Ai~~Aa~ 150 (406)
...+++++|+++|++++|||.+-+--.+ ....-...+.+||+. -| +++ +..++||..-+.+.+.
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~daF------a~~~l~~le~lgl~g-~~-vN~~GG~la~GHP~GatG~~~~~~l~~ 358 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNEAF------SIASIIVRDQLKIDN-ER-FNVNGGAVAIGHPIGNSGSRIIVTLIN 358 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccchh------HHHHHHHHHHhCCCC-Cc-cCCCCchhhhCCCcCCCHHHHHHHHHH
Confidence 3689999999999999999987662211 122233445677742 22 222 2335677777777888
Q ss_pred HHHcCCCCEEEE
Q 015474 151 AIKAGFYDIGIG 162 (406)
Q Consensus 151 ~I~sG~~d~vL~ 162 (406)
.++......+|+
T Consensus 359 qL~~~~~~~g~~ 370 (388)
T PRK06366 359 ALKTRHMKTGLA 370 (388)
T ss_pred HHHhcCCCeEEE
Confidence 786543444543
No 253
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=40.38 E-value=30 Score=33.34 Aligned_cols=41 Identities=32% Similarity=0.380 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcccc-----chHHHHHHHHHcCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 378 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~-----fa~~~l~~~e~lGl~ 378 (406)
..|++++|+++|++++|||.+-+-.. +........+.||+.
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~ 98 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT 98 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC
Confidence 57999999999999999999875221 233445567889986
No 254
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=39.90 E-value=49 Score=30.83 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEE
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVG 103 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g 103 (406)
..+.....++.+|+.++++.+|||.+++-
T Consensus 49 Hr~~il~Lv~~al~ea~v~~~diD~icyT 77 (336)
T KOG2708|consen 49 HRAWILGLVKQALEEAGVTSDDIDCICYT 77 (336)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEc
Confidence 34556677899999999999999999883
No 255
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=38.30 E-value=3.9e+02 Score=26.03 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEEEcCCCchHHHHHHHHHHHHH
Q 015474 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (406)
Q Consensus 74 ~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~CaSg~~Ai~~Aa~~I~ 153 (406)
....=...++++|+.++|++|++|+..+.|-...... ..........++|... -..| |.-+.-|+.-+..
T Consensus 46 ~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~---~~~~~~~~~~~l~~a~-~v~v---~~Dg~iAl~ga~~--- 115 (301)
T COG2971 46 EAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGAN---VEEAREELERLLPFAG-KVDV---ENDGLIALRGALG--- 115 (301)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHhCceeeeeeccCcc---hhHHHHHHHHhcCccc-eEEE---ecChHHHHhhccC---
Confidence 3445567788999999999999999999987665432 1122223345554222 2333 3345555543221
Q ss_pred cCCCCEEEEEeecCCCCC-----CC---CCCCCCChh----------hhhhhhhhccCcchHHHHHHHHHHcCCCHHHHH
Q 015474 154 AGFYDIGIGAGLESMTVN-----PM---AWEGSVNPK----------VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 215 (406)
Q Consensus 154 sG~~d~vL~~G~E~ms~~-----~~---~~~~~~~~~----------~~~~~~~~~~~~~~g~~a~~~~~~~g~sre~~~ 215 (406)
+.--++++.|+=|..-. .. .||..++|. +.......|....-...++.++..|+...+++=
T Consensus 116 -~~~Gii~i~GTGSi~~~~~gg~~~r~GG~Gf~IgDegSga~ig~~~L~~~lra~DG~~~~t~L~d~v~~~f~~d~edlv 194 (301)
T COG2971 116 -DDDGIIVIAGTGSIGYGRKGGRRERVGGWGFPIGDEGSGAWIGREALQEALRAFDGRREATPLTDAVMAEFNLDPEDLV 194 (301)
T ss_pred -CCCCEEEEecCCeEEEEEeCCeeEEecCcCccccccchHHHHHHHHHHHHHHHhcCCccCChHHHHHHHHhCCCHHHHH
Confidence 34455566665443210 01 233333331 111122233333333457788899999888887
Q ss_pred HHHHHH
Q 015474 216 QAAVDS 221 (406)
Q Consensus 216 ~~a~~s 221 (406)
.|.++.
T Consensus 195 ~~~y~a 200 (301)
T COG2971 195 AFIYKA 200 (301)
T ss_pred HHHHhc
Confidence 776654
No 256
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=38.16 E-value=59 Score=32.81 Aligned_cols=76 Identities=11% Similarity=0.130 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceE------E-EcCCCchHHHHHHHHHHHH
Q 015474 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR------T-VNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 80 ~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~------~-v~~~CaSg~~Ai~~Aa~~I 152 (406)
..+++++|+++|++++|||.+-+.-. + ..........+|++. .|+. . =...++||+..+.+.+..+
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~----f--~~~~l~~~e~lg~~~-~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l 366 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA----F--SVVALANQKLLGLDP-EKVNVHGGAVSLGHPIGCSGARILVTLLGVL 366 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----H--HHHHHHHHHHhCCCc-cccCCCCChHhhCCCHHHHHHHHHHHHHHHH
Confidence 45899999999999999999886211 1 122334456778731 1211 1 1234678888888888888
Q ss_pred HcCCCCEEEE
Q 015474 153 KAGFYDIGIG 162 (406)
Q Consensus 153 ~sG~~d~vL~ 162 (406)
+.-.....|+
T Consensus 367 ~~~~~~~g~~ 376 (394)
T PLN02644 367 RSKNGKYGVA 376 (394)
T ss_pred HhcCCCeEEE
Confidence 7544444544
No 257
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=37.78 E-value=27 Score=25.83 Aligned_cols=27 Identities=37% Similarity=0.502 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHcCCCCCCccEEEccc
Q 015474 336 GPAVAIPAAVKSAGLQLDDIDLFEINE 362 (406)
Q Consensus 336 ~~~~A~~~al~~AGl~~~DID~~e~hd 362 (406)
+.-.|+..++.+|-=+.+++|+||+-|
T Consensus 18 S~d~Ai~~Ai~RA~~t~~~l~wfeV~~ 44 (71)
T COG3360 18 SIDAAIANAIARAADTLDNLDWFEVVE 44 (71)
T ss_pred cHHHHHHHHHHHHHhhhhcceEEEEEe
Confidence 445799999999999999999999876
No 258
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=36.70 E-value=1.4e+02 Score=29.94 Aligned_cols=78 Identities=10% Similarity=0.120 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC--CceE------E-EcCCCchHHHHHHHHH
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET--VPVR------T-VNRQCSSGLQAVADVA 149 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~--~~~~------~-v~~~CaSg~~Ai~~Aa 149 (406)
...+++++|+++|++|+|||.+=+- +.+ ....-.....+|+... .|+. . -...++||...+...+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----daF--a~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~ 355 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EAF--AAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLL 355 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----ccc--HHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHH
Confidence 4678899999999999999987662 111 1222233456776221 1211 1 1244678888888888
Q ss_pred HHHHcCCCCEEEE
Q 015474 150 AAIKAGFYDIGIG 162 (406)
Q Consensus 150 ~~I~sG~~d~vL~ 162 (406)
+....-....+|+
T Consensus 356 ~~l~~~~~~~Gl~ 368 (385)
T TIGR02445 356 NLMEQKDATFGLA 368 (385)
T ss_pred HHHHhcCCCeEEE
Confidence 7775433444543
No 259
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=36.68 E-value=37 Score=34.01 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc-----ccchHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h-----d~fa~~~l~~~e~lGl~~ 379 (406)
..|++++|+++ +++|||++.+- +.+.....+..+.||+.+
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~ 98 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQP 98 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCC
Confidence 47999999998 89999999763 334556677888899865
No 260
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=36.66 E-value=1.6e+02 Score=37.47 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=61.8
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCC----C
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFP----E 127 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~----~ 127 (406)
+|.|.+.+-=|+. + ++-.-+..- -.+++++||++||++|++||.|-. |+.+.-+ .......+...+|-. .
T Consensus 294 vI~G~g~~~DG~~-~-~itaP~~~g-q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g--D~~E~~Al~~vf~~~~~~~~ 368 (2582)
T TIGR02813 294 VIKGVGASSDGKF-K-SIYAPRPEG-QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAG--DVAEFGGLVSVFSQDNDQKQ 368 (2582)
T ss_pred EEEEEEEcCCCCC-C-CCcCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCC--CHHHHHHHHHHhcccccCCC
Confidence 5888887666652 1 222223333 367899999999999999998754 3332221 233445555555421 1
Q ss_pred CCceEE-----EcCCCchHHHHHHHHHHHHHcCCC
Q 015474 128 TVPVRT-----VNRQCSSGLQAVADVAAAIKAGFY 157 (406)
Q Consensus 128 ~~~~~~-----v~~~CaSg~~Ai~~Aa~~I~sG~~ 157 (406)
.+++-+ =...+++|+..+.-++.+++.|.+
T Consensus 369 ~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 369 HIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred CceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 122222 235578999999999999988864
No 261
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.45 E-value=50 Score=32.84 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCC
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGF 125 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl 125 (406)
=+..+.+++|++|||.|+|||.|-. .++++-+ ....+..+...++-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G--D~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLG--DAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCc--hHHHHHHHHHHhcc
Confidence 3566788999999999999999864 3333322 23345555555543
No 262
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=35.14 E-value=62 Score=26.84 Aligned_cols=59 Identities=8% Similarity=0.122 Sum_probs=36.4
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCC
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl 125 (406)
++++|.|. | ++.+ .+...++++++|++.++++..|+.+..-..-.+ ...-..++..+|+
T Consensus 1 ~l~~GiGc----r------r~~~-~~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~~----E~~l~~~A~~l~~ 59 (121)
T PF01890_consen 1 NLVLGIGC----R------RGAP-AEEIEEAIEQALAEAGLSPRSIAAIASIDIKAD----EPGLLELAEELGI 59 (121)
T ss_dssp -EEEEEEE-----------SS---HHHHHHHHHHHHHHCT--GGGEEEEEESSSSS------HHHHHHHHHCTS
T ss_pred CEEEEeCc----C------CCCC-HHHHHHHHHHHHHHcCCChhhccEEEeccccCC----CHHHHHHHHHhCC
Confidence 46788884 2 2444 555688999999999999999998887443322 2233466777776
No 263
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=35.13 E-value=1.9e+02 Score=28.12 Aligned_cols=96 Identities=17% Similarity=0.055 Sum_probs=50.1
Q ss_pred CCceEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC
Q 015474 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (406)
Q Consensus 49 ~~~v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~ 128 (406)
|+++||||-+-| ..+||+. +.++++++|.++-.||.-+.++ +... ....+..++...+= +
T Consensus 2 ~krIyVvgT~DT-------------Kg~EL~y--lad~I~~aG~~~v~vDvs~~~~--~~~~-~dis~~~VA~~hp~--~ 61 (401)
T COG5441 2 MKRIYVVGTADT-------------KGEELAY--LADLIEAAGGSPVLVDVSTLRN--PTSE-VDISAEDVAGAHPG--G 61 (401)
T ss_pred CceEEEEecCCC-------------cchhHHH--HHHHHHHcCCCeEEEEeeccCC--CCCC-cccCHHHHhhhCCC--c
Confidence 578999987644 2366766 3578999999988777655432 2221 22334455554432 2
Q ss_pred CceEEEcCCCchHHHHHHHHHHHHH--cCCCCEEEEEe
Q 015474 129 VPVRTVNRQCSSGLQAVADVAAAIK--AGFYDIGIGAG 164 (406)
Q Consensus 129 ~~~~~v~~~CaSg~~Ai~~Aa~~I~--sG~~d~vL~~G 164 (406)
..+.--.+--.+...++..|...-. .++.+-+|..|
T Consensus 62 ~qAv~~~~Drg~AiaaMa~A~~r~l~sR~dV~gmig~G 99 (401)
T COG5441 62 RQAVLDGNDRGSAIAAMAEAFVRFLSSRGDVAGMIGMG 99 (401)
T ss_pred ceeEeccCchhHHHHHHHHHHHHHhhcccchhheeecC
Confidence 2222222223344455544444333 34444444433
No 264
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=34.73 E-value=2.9e+02 Score=27.82 Aligned_cols=76 Identities=18% Similarity=0.144 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEE-EeecCCCCCCccHHHHHHHHcCCCC-CCce-----EEEcCCCchHHHHHHHHH
Q 015474 77 DLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPE-TVPV-----RTVNRQCSSGLQAVADVA 149 (406)
Q Consensus 77 ~L~~~A~~~AL~dAgl~~~~ID~v~~-g~~~~~~~~~~~~a~~va~~lGl~~-~~~~-----~~v~~~CaSg~~Ai~~Aa 149 (406)
+-...++++||+++|+ ++||.|.. |+..+.. .......+...+|-.. ..|+ ..-...+++|...+..++
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~--D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~ 349 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYN--DKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISI 349 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCC--CHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHH
Confidence 4556889999999998 78887754 3322221 2334444555555311 1122 223456678887777788
Q ss_pred HHHHcCC
Q 015474 150 AAIKAGF 156 (406)
Q Consensus 150 ~~I~sG~ 156 (406)
..++.|.
T Consensus 350 ~~l~~~~ 356 (406)
T PRK08439 350 MAMRDGI 356 (406)
T ss_pred HHHhCCe
Confidence 8888774
No 265
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=34.46 E-value=62 Score=24.76 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=28.0
Q ss_pred EcCCCchHHHHHHHHHHHHHcCCCCEEEEEee
Q 015474 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165 (406)
Q Consensus 134 v~~~CaSg~~Ai~~Aa~~I~sG~~d~vL~~G~ 165 (406)
+...++||...-..+...+..|.+|.+++++.
T Consensus 13 ir~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~ 44 (82)
T PF04422_consen 13 IREKSQSGGVVTALLAYLLESGLVDGVVVVGR 44 (82)
T ss_pred hcccCCcHHHHHHHHHHHHHcCCceEEEEEee
Confidence 44678888888899999999999999999984
No 266
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=33.80 E-value=1.3e+02 Score=30.20 Aligned_cols=77 Identities=12% Similarity=0.101 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCCCceEE-------EcCCCchHHHHHHHHHHHH
Q 015474 80 APVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-------VNRQCSSGLQAVADVAAAI 152 (406)
Q Consensus 80 ~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~~~~~-------v~~~CaSg~~Ai~~Aa~~I 152 (406)
..++++|++++|+.++|||.+-+- +.+ ....-.....+||.. .|+-+ -....+||+.-+.+.+..+
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~F--a~~~~~~~e~lG~~~-~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL 355 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAF--APVVLAWLKETGADP-AKVNPNGGAIALGHPLGATGAKLMTTLLHEL 355 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccc--hHHHHHHHHHhCCCc-hhcCCCcchhhhcCcHHHHHHHHHHHHHHHH
Confidence 468999999999999999988542 211 122333456678742 22211 1233467787888888888
Q ss_pred HcCCCCEEEEE
Q 015474 153 KAGFYDIGIGA 163 (406)
Q Consensus 153 ~sG~~d~vL~~ 163 (406)
+.-...++|+.
T Consensus 356 ~~~~~~~gl~~ 366 (382)
T PRK07801 356 ERTGGRYGLQT 366 (382)
T ss_pred HhcCCCEEEEE
Confidence 75334455443
No 267
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=31.10 E-value=1.8e+02 Score=29.81 Aligned_cols=23 Identities=9% Similarity=0.101 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEE
Q 015474 80 APVLKAVIEKTNVDPSEVGDIVV 102 (406)
Q Consensus 80 ~~A~~~AL~dAgl~~~~ID~v~~ 102 (406)
..+++++|+.+|++++|||.+-+
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei 336 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDM 336 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46889999999999999998766
No 268
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=30.87 E-value=47 Score=34.90 Aligned_cols=51 Identities=16% Similarity=0.271 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC---CCccHHHHHHHHcCC
Q 015474 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS---QRASECRMAAFYAGF 125 (406)
Q Consensus 75 ~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~---~~~~~a~~va~~lGl 125 (406)
..+....+++++|+++|+++++||.|.++..-+... -|...++.++..+++
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~ 101 (535)
T PRK09605 48 HAEAIPKVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV 101 (535)
T ss_pred HHHHHHHHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC
Confidence 344556889999999999999999999965322211 012235555555555
No 269
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=30.69 E-value=46 Score=32.35 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCCCC---------------CceEEEcCCCc-hHHHHH
Q 015474 82 VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET---------------VPVRTVNRQCS-SGLQAV 145 (406)
Q Consensus 82 A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~~~---------------~~~~~v~~~Ca-Sg~~Ai 145 (406)
.+..-|+|.|.+|++-|.|+.|--- . . |..+.+.+...-|++.. -.++.=..+|+ |.....
T Consensus 208 TI~~h~~D~g~~p~dYDlIvTGDLg-~-v-G~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~ 284 (329)
T PF07451_consen 208 TIEQHFKDTGRSPDDYDLIVTGDLG-K-V-GRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVLC 284 (329)
T ss_dssp HHHHHHHHCT--GGG-SEEEESS-H-H-H-HHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHHH
T ss_pred HHHHHHHHhCCChhhcCeEEecchH-H-H-HHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHHH
Confidence 3445588999999999999986311 0 0 23344444445554211 12222234554 445555
Q ss_pred HHHHHHHHcCCCCEEEEEeecC
Q 015474 146 ADVAAAIKAGFYDIGIGAGLES 167 (406)
Q Consensus 146 ~~Aa~~I~sG~~d~vL~~G~E~ 167 (406)
......++.|+...+|++++-.
T Consensus 285 g~ll~~l~~g~~krvL~vaTGA 306 (329)
T PF07451_consen 285 GYLLPKLRKGELKRVLFVATGA 306 (329)
T ss_dssp HCHHHHHHTTS-SEEEEEEEEE
T ss_pred HHHHHHHHcCCceEEEEEEchh
Confidence 7788999999999999998654
No 270
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=30.13 E-value=95 Score=25.90 Aligned_cols=59 Identities=10% Similarity=0.183 Sum_probs=39.9
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC
Q 015474 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (406)
Q Consensus 53 ~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~ 126 (406)
+++|+|. | ++.+.++ ..++++++|++.++++..|+.+..-..-.+ ...-..++..+|+|
T Consensus 4 ~~vGIGc----r------~~~~~e~-i~~ai~~~L~~~~l~~~si~~lasi~~K~~----E~~L~~~A~~lg~p 62 (126)
T PRK07027 4 VALGIGC----R------RGVPAEQ-IEAAIRAALAQRPLASADVRVVATLDLKAD----EAGLLALCARHGWP 62 (126)
T ss_pred EEEeecc----C------CCCCHHH-HHHHHHHHHHHcCCCHHHhheeEehhhhcC----CHHHHHHHHHhCCC
Confidence 4788873 2 2455555 588899999999999999998877443321 12234567777874
No 271
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=28.20 E-value=80 Score=31.88 Aligned_cols=23 Identities=48% Similarity=0.592 Sum_probs=20.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEc
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEI 360 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~ 360 (406)
..+++++|+++||+++|||.+-+
T Consensus 36 ~~a~~~aL~~Agi~~~dID~vi~ 58 (397)
T PRK06954 36 AAAIAAAVERAGLKPEQIDEVVM 58 (397)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEE
Confidence 57999999999999999998854
No 272
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=27.00 E-value=89 Score=27.02 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccchHHHHHHHHHcCCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE 380 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~fa~~~l~~~e~lGl~~~ 380 (406)
...+..+|++.|++..|+++|-+|=.-....-...+.|||+++
T Consensus 43 ~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~ 85 (151)
T PF02797_consen 43 PPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPE 85 (151)
T ss_dssp HHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GG
T ss_pred HHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHH
Confidence 4578899999999987888999998888877788888999875
No 273
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=26.61 E-value=40 Score=34.86 Aligned_cols=41 Identities=10% Similarity=0.136 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc-----ccchHHHHHH---HHHcCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYC---RNKLGLD 378 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h-----d~fa~~~l~~---~e~lGl~ 378 (406)
..|++++|+++|++++|||++.+- |.+.....+. ++.||..
T Consensus 58 ~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~ 106 (459)
T PLN02577 58 LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT 106 (459)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC
Confidence 579999999999999999999873 4455444333 4667764
No 274
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=25.86 E-value=39 Score=25.26 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCccEEEccccchHH
Q 015474 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (406)
Q Consensus 334 ~~~~~~A~~~al~~AGl~~~DID~~e~hd~fa~~ 367 (406)
+..|..-+..+.+.+|++.+||.-++++|.|+..
T Consensus 12 g~~~~~iv~~i~~~~gi~~~~IG~I~I~~~~S~v 45 (74)
T PF03880_consen 12 GLTPRDIVGAICNEAGIPGRDIGRIDIFDNFSFV 45 (74)
T ss_dssp T--HHHHHHHHHTCTTB-GGGEEEEEE-SS-EEE
T ss_pred CCCHHHHHHHHHhccCCCHHhEEEEEEeeeEEEE
Confidence 3456667777888889999999999999999864
No 275
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=25.18 E-value=82 Score=31.83 Aligned_cols=42 Identities=7% Similarity=0.054 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccccc---h--HHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEINEAF---A--SQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~hd~f---a--~~~l~~~e~lGl~~ 379 (406)
..+++++|+++||+++|||.+-+=..+ . .........+||+.
T Consensus 32 ~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~ 78 (392)
T PRK06633 32 AHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPK 78 (392)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCC
Confidence 479999999999999999987663222 1 11233457789974
No 276
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=23.87 E-value=53 Score=30.60 Aligned_cols=23 Identities=30% Similarity=0.385 Sum_probs=20.5
Q ss_pred HHHHHHHHHcCCCCCCccEEEcc
Q 015474 339 VAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 339 ~A~~~al~~AGl~~~DID~~e~h 361 (406)
..++++|++++++.+|||++..-
T Consensus 55 ~Lv~~al~ea~v~~~diD~icyT 77 (336)
T KOG2708|consen 55 GLVKQALEEAGVTSDDIDCICYT 77 (336)
T ss_pred HHHHHHHHHcCCChhhCCEEEEc
Confidence 57899999999999999999764
No 277
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=23.68 E-value=1.3e+02 Score=30.08 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEee
Q 015474 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTV 105 (406)
Q Consensus 70 ~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~ 105 (406)
+...+..+|....+.+++++|+|+.+|+|.|+=.+.
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG 95 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG 95 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccc
Confidence 345678999999999999999999999999885443
No 278
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=23.58 E-value=96 Score=30.51 Aligned_cols=50 Identities=18% Similarity=0.123 Sum_probs=33.1
Q ss_pred eEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCC-CCCCCCeEEEE
Q 015474 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNV-DPSEVGDIVVG 103 (406)
Q Consensus 52 v~Ivg~~~tp~~r~~~g~~~~~~~~~L~~~A~~~AL~dAgl-~~~~ID~v~~g 103 (406)
-.-+|..+|+-=.. -.+-.+--.++...++++|+.+||| ||.|+-.+-+=
T Consensus 110 rLavg~a~T~~~~P--EeiGr~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvK 160 (366)
T TIGR02714 110 RLTVGVAFTRQFLP--EEIGRTAQITETAAAVKRAMRDAGIADPADVHFVQVK 160 (366)
T ss_pred ceEEEeecCCCCCh--HHcCcHHHHHHHHHHHHHHHHHcCCCChhHeeEEEec
Confidence 45677777754210 1122234567788999999999999 67887776653
No 279
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=22.19 E-value=48 Score=33.47 Aligned_cols=42 Identities=19% Similarity=0.145 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc----ccc--hHHHHHHHHHcCCCC
Q 015474 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAF--ASQFVYCRNKLGLDP 379 (406)
Q Consensus 338 ~~A~~~al~~AGl~~~DID~~e~h----d~f--a~~~l~~~e~lGl~~ 379 (406)
..+++++|+++||+++|||.+-+= +.+ ..........+|++.
T Consensus 32 ~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~ 79 (392)
T PRK07108 32 GHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPV 79 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCC
Confidence 479999999999999999987552 222 123344555678763
No 280
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=22.03 E-value=1.1e+02 Score=30.41 Aligned_cols=46 Identities=11% Similarity=0.094 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeecCCCC----CCccHHHHHHHHcCC
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS----QRASECRMAAFYAGF 125 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~----~~~~~a~~va~~lGl 125 (406)
...+++++|++|++.|+|+|.|.+-. .|+.. -|-..++.++..+..
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~-gPGl~lsL~vGl~fA~glA~~l~k 135 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTR-GPGLPLSLKVGLSFAKGLAVKLQK 135 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEec-CCCceeehhhhHHHHHHHHHhccC
Confidence 45678899999999999999998832 22221 123445555555544
No 281
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=21.17 E-value=3.6e+02 Score=27.12 Aligned_cols=92 Identities=22% Similarity=0.098 Sum_probs=59.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCCccHHHHHHHHcCCC-----CCCce--EEEcCCCc
Q 015474 67 RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP-----ETVPV--RTVNRQCS 139 (406)
Q Consensus 67 ~g~~~~~~~~~L~~~A~~~AL~dAgl~~~~ID~v~~g~~~~~~~~~~~~a~~va~~lGl~-----~~~~~--~~v~~~Ca 139 (406)
+|.+...........+.+..+++.|+.++|.|.+++=.-. .-....++..+|.+ ++.-. ..=|.-|+
T Consensus 199 dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~------~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~Ytg 272 (377)
T COG3425 199 DGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPN------GKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTG 272 (377)
T ss_pred CceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCC------CchHHHHHHHhCccHhhcCccchhhhhcCcccch
Confidence 3455544566777888999999999999999999984322 23455666666663 11111 12366777
Q ss_pred hHHHHHHHHHHHHHcCCCCEEEEEee
Q 015474 140 SGLQAVADVAAAIKAGFYDIGIGAGL 165 (406)
Q Consensus 140 Sg~~Ai~~Aa~~I~sG~~d~vL~~G~ 165 (406)
|...++......-. -.-|.+|++..
T Consensus 273 S~~L~Las~L~~a~-~~G~rIl~~SY 297 (377)
T COG3425 273 SLLLGLASLLDNAK-LPGDRILLFSY 297 (377)
T ss_pred hHHHHHHHHHhhcC-CCCCEEEEEee
Confidence 87777766665544 13478888753
No 282
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=21.06 E-value=3.7e+02 Score=27.47 Aligned_cols=26 Identities=4% Similarity=0.027 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEE
Q 015474 78 LLAPVLKAVIEKTNVDPSEVGDIVVG 103 (406)
Q Consensus 78 L~~~A~~~AL~dAgl~~~~ID~v~~g 103 (406)
....+++++++.+|++++|||.+-+-
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 44568899999999999999988763
No 283
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=20.82 E-value=79 Score=31.25 Aligned_cols=23 Identities=35% Similarity=0.566 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCCCCccEEEcc
Q 015474 339 VAIPAAVKSAGLQLDDIDLFEIN 361 (406)
Q Consensus 339 ~A~~~al~~AGl~~~DID~~e~h 361 (406)
..++++|++||++.+|||.+-+-
T Consensus 56 ~li~~al~eA~~~~~dID~IA~T 78 (342)
T COG0533 56 PLIEEALAEAGVSLEDIDAIAVT 78 (342)
T ss_pred HHHHHHHHHcCCCcccCCEEEEe
Confidence 68899999999999999999753
No 284
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=20.27 E-value=80 Score=31.10 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCC-CCCCccEEEcc
Q 015474 338 AVAIPAAVKSAGL-QLDDIDLFEIN 361 (406)
Q Consensus 338 ~~A~~~al~~AGl-~~~DID~~e~h 361 (406)
+.++++++.++|| +|+||.|+++-
T Consensus 135 A~aV~~aM~~AGI~dpaDVH~VQvK 159 (365)
T PF09663_consen 135 AAAVRAAMADAGITDPADVHFVQVK 159 (365)
T ss_pred HHHHHHHHHHcCCCChhheeeEEec
Confidence 4799999999999 79999999985
No 285
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=20.16 E-value=3.3e+02 Score=27.73 Aligned_cols=24 Identities=13% Similarity=0.098 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEE
Q 015474 79 LAPVLKAVIEKTNVDPSEVGDIVV 102 (406)
Q Consensus 79 ~~~A~~~AL~dAgl~~~~ID~v~~ 102 (406)
...+++++|+++|++++|||.+-+
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei 334 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDM 334 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 456889999999999999998766
Done!