BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015480
(406 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 165/296 (55%), Gaps = 17/296 (5%)
Query: 69 RFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEV 126
RF+ +L + N+S + LG GGFG+VYKG+ +G +AVK L + E QF EV
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 127 GTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRA---IEWEKLHEIAI 183
I H NL+RL GFC LVY YM NGS+ L + + ++W K IA+
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 184 GTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG 243
G+A+GL YLH+ C +IIH D+K N+LLD F V DFGLAKL D HV + +G
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRG 205
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV-GRR-----RNAIVGATESLDWFPKHV 297
T G+ APE+LS + K DV+ +G++L E++ G+R R A LDW +
Sbjct: 206 TIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 298 WEEYEKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEG 353
E+ + + + G KD E+ ++L VAL C Q SP +RP MS V++MLEG
Sbjct: 265 KEKKLEALVDVDLQG---NYKD-EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 163/296 (55%), Gaps = 17/296 (5%)
Query: 69 RFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEV 126
RF+ +L + N+ + LG GGFG+VYKG+ +G +AVK L + E QF EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 127 GTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRA---IEWEKLHEIAI 183
I H NL+RL GFC LVY YM NGS+ L + + ++W K IA+
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 184 GTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG 243
G+A+GL YLH+ C +IIH D+K N+LLD F V DFGLAKL D HV + +G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRG 197
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV-GRR-----RNAIVGATESLDWFPKHV 297
G+ APE+LS + K DV+ +G++L E++ G+R R A LDW +
Sbjct: 198 XIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 298 WEEYEKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEG 353
E+ + + + G KD E+ ++L VAL C Q SP +RP MS V++MLEG
Sbjct: 257 KEKKLEALVDVDLQG---NYKD-EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 159/291 (54%), Gaps = 14/291 (4%)
Query: 69 RFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEV 126
R + L T+N+ + +G G FG+VYKG +G K+A+K + E+F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ-GIEEFETEI 86
Query: 127 GTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---RAIEWEKLHEIAI 183
T+ H +LV L GFC +++ L+Y+YMENG+L +L+G ++ WE+ EI I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 184 GTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKL-CDRNKTHVTISGYK 242
G A+GL YLH + IIH D+K N+LLD NF PK+ DFG++K + ++TH+ K
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-VK 202
Query: 243 GTPGYSAPE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEY 301
GT GY PE F+ G +T K DVYSFG+VLFE++ R + + + E +
Sbjct: 203 GTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 302 EKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+L ++ ++ E ++ A+ C+ S EDRP M V+ LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 158/291 (54%), Gaps = 14/291 (4%)
Query: 69 RFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEV 126
R + L T+N+ + +G G FG+VYKG +G K+A+K + E+F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ-GIEEFETEI 86
Query: 127 GTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---RAIEWEKLHEIAI 183
T+ H +LV L GFC +++ L+Y+YMENG+L +L+G ++ WE+ EI I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 184 GTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKL-CDRNKTHVTISGYK 242
G A+GL YLH + IIH D+K N+LLD NF PK+ DFG++K + +TH+ K
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-VK 202
Query: 243 GTPGYSAPE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEY 301
GT GY PE F+ G +T K DVYSFG+VLFE++ R + + + E +
Sbjct: 203 GTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 302 EKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+L ++ ++ E ++ A+ C+ S EDRP M V+ LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 115/220 (52%), Gaps = 19/220 (8%)
Query: 70 FTSLQLNNFTSNYSTR--------LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEE- 120
F+ +L N T+N+ R +G GGFG VYKG + N +AVK L + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 121 --QFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWE 176
QF E+ + + H NLV L GF D LVY YM NGSL L + W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+IA G A G+ +LHE IH DIK N+LLD F+ K++DFGLA+ ++ V
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
S GT Y APE L G IT K D+YSFG+VL EI+
Sbjct: 191 MXSRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 70 FTSLQLNNFTSNYSTR--------LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEE- 120
F+ +L N T+N+ R +G GGFG VYKG + N +AVK L + EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 121 --QFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWE 176
QF E+ + + H NLV L GF D LVY YM NGSL L + W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+IA G A G+ +LHE IH DIK N+LLD F+ K++DFGLA+ ++ V
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GT Y APE L G IT K D+YSFG+VL EI+
Sbjct: 185 MXXRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEII 222
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 70 FTSLQLNNFTSNYSTR--------LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEE- 120
F+ +L N T+N+ R +G GGFG VYKG + N +AVK L + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 121 --QFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWE 176
QF E+ + + H NLV L GF D LVY YM NGSL L + W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+IA G A G+ +LHE IH DIK N+LLD F+ K++DFGLA+ ++ V
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GT Y APE L G IT K D+YSFG+VL EI+
Sbjct: 191 MXXRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEII 228
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 112/220 (50%), Gaps = 19/220 (8%)
Query: 70 FTSLQLNNFTSNYSTR--------LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEE- 120
F+ +L N T+N+ R G GGFG VYKG + N +AVK L + EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 121 --QFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWE 176
QF E+ + H NLV L GF D LVY Y NGSL L + W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+IA G A G+ +LHE IH DIK N+LLD F+ K++DFGLA+ ++ V
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
S GT Y APE L G IT K D+YSFG+VL EI+
Sbjct: 182 XXSRIVGTTAYXAPEALRGE--ITPKSDIYSFGVVLLEII 219
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 137
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 194
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 245
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 246 YQLMRLC----W--KERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 83 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 136
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 193
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 244
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 245 YQLMRLC----W--KERPEDRPTFDYLRSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 188
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 239
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 240 YQLMRLC----W--KERPEDRPTFDYLRSVLE 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 88 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 141
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 198
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 249
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 250 YQLMRLC----W--KERPEDRPTFDYLRSVLE 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 137
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 194
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 245
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 246 YQLMRLC----W--KERPEDRPTFDYLRSVLE 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 80 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 190
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 241
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 242 YQLMRLC----W--KERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 87 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 140
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 197
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 248
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 249 YQLMRLC----W--KERPEDRPTFDYLRSVLE 274
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 79 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 132
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 189
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 240
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 241 YQLMRLC----W--KERPEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 188
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 239
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 240 YQLMRLC----W--KERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 73 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 126
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 183
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 234
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 235 YQLMRLC----W--KERPEDRPTFDYLRSVLE 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 86 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 139
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 196
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 247
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 248 YQLMRLC----W--KERPEDRPTFDYLRSVLE 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + N+ G K ++APE + NY T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NYGTFT 188
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 239
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 240 YQLMRLC----W--KERPEDRPTFDYLRSVLE 265
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 74 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 127
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H +++ N+L+ S K+ADFGLA+L + N+ + G K ++APE + NY T
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFT 184
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 235
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 236 YQLMRLC----W--KERPEDRPTFDYLRSVLE 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 22/276 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++EE F+ E + + H LV+L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV+E+ME+G L YL ++ E L + + +G+ YL E C +
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS-RYS 180
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 225
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
+ + + C ++ PEDRP S +++ L + E
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 22/276 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++EE F+ E + + H LV+L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV+E+ME+G L YL ++ E L + + +G+ YL E C +
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS-RYS 185
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 230
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
+ + + C ++ PEDRP S +++ L + E
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 22/276 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++EE F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV+E+ME+G L YL ++ E L + + +G+ YL E C +
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFS-RYS 182
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 227
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
+ + + C ++ PEDRP S +++ L + E
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 133/276 (48%), Gaps = 22/276 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++E+ F+ E + + H LV+L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKE--GSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV+E+ME+G L YL ++ E L + + +G+ YL E C +
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSR-YS 202
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 247
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
+ + + C ++ PEDRP S +++ L + E
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVL-NRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
N ++G G FG V++ ++ +G +AVK+L ++ +F+ EV + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF--GKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
G ++V EY+ GSL L G + ++ + +A AKG+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY 257
I+H ++K N+L+D ++ KV DFGL++L + T ++ GTP + APE L +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR-DE 214
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMI-LGCGIE 316
P K DVYSFG++L+E+ + W ++ A + C
Sbjct: 215 PSNEKSDVYSFGVILWELATL----------------QQPWGNLNPAQVVAAVGFKCKRL 258
Query: 317 EKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE-VLPPP 361
E + ++ + C + P RP + ++ +L +++ +PPP
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 22/276 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++EE F+ E + + H LV+L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV E+ME+G L YL ++ E L + + +G+ YL E C +
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSR-YS 183
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 228
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
+ + + C ++ PEDRP S +++ L + E
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 135/272 (49%), Gaps = 30/272 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G GEV+ G + K+AVK L + G ++ + F+AE + + H LVRLY
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 145 HDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
Q ++ EYMENGSL +L G K I KL ++A A+G+ ++ E + I
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYI 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PIT 260
H D++ N+L+ S K+ADFGLA+L + + G K ++APE + NY T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAI--NYGTFT 188
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++L EIV R G T E + E G ++ ++
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP---------EVIQNLERGYRMVRPDNCPEEL 239
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ RLC W ++ PEDRP + +LE
Sbjct: 240 YQLMRLC----W--KERPEDRPTFDYLRSVLE 265
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 26/286 (9%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVL-NRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
N ++G G FG V++ ++ +G +AVK+L ++ +F+ EV + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF--GKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
G ++V EY+ GSL L G + ++ + +A AKG+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY 257
I+H D+K N+L+D ++ KV DFGL++L + + GTP + APE L +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR-DE 214
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMI-LGCGIE 316
P K DVYSFG++L+E+ + W ++ A + C
Sbjct: 215 PSNEKSDVYSFGVILWELATL----------------QQPWGNLNPAQVVAAVGFKCKRL 258
Query: 317 EKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE-VLPPP 361
E + ++ + C + P RP + ++ +L +++ +PPP
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 140/283 (49%), Gaps = 26/283 (9%)
Query: 83 STRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMA---EVGTIGRTYHINLVR 139
STR+G G FG VYKG++ V AVK+L + EQF A EV + +T H+N++
Sbjct: 41 STRIGSGSFGTVYKGKWHGDV--AVKILK--VVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
G+ ++ A+V ++ E SL +L ++ + +L +IA TA+G+ YLH +
Sbjct: 97 FMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KN 152
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNY 257
IIH D+K N+ L + K+ DFGLA + R + G+ + APE + N
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 258 PITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIE 316
P + + DVYS+G+VL+E++ G + + + + + V Y +L + C
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRGYASPDLSKLYKNC--- 266
Query: 317 EKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLP 359
+ KRL CV+ E+RP ++ +E + LP
Sbjct: 267 ---PKAMKRLVAD---CVKKVKEERPLFPQILSSIELLQHSLP 303
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 19 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E +KL +IA TA+G+ YLH + IIH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + + P +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DVY+FG+VL+E++
Sbjct: 193 QSDVYAFGIVLYELM 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +G G FG V+ G + N K+A+K + G ++EE F+ E + + H LV+L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG C +Q LV+E+ME+G L YL ++ E L + + +G+ YL E +
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASV 124
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+ N L+ N KV+DFG+ + + + + +G K +++PE S + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSR-YS 182
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
K DV+SFG++++E+ + + S E E G + K +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNS---------EVVEDISTGFRLY------KPR 227
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGV 354
+ + + C ++ PEDRP S +++ L +
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E +KL +IA TA+G+ YLH + IIH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA R G+ + APE + + P +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 262 KCDVYSFGMVLFEIV 276
+ DVY+FG+VL+E++
Sbjct: 205 QSDVYAFGIVLYELM 219
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E +KL +IA TA+G+ YLH + IIH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA R G+ + APE + + P +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 262 KCDVYSFGMVLFEIV 276
+ DVY+FG+VL+E++
Sbjct: 205 QSDVYAFGIVLYELM 219
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FG V K ++ +A+K + R A F+ E+ + R H N+V+LYG C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL 72
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA--IGTAKGLVYLHEECQQRIIHY 203
+ LV EY E GSL L G + + H ++ + ++G+ YLH + +IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 204 DIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG-NYPITH 261
D+KP N+LL A + K+ DFG A CD +TH+T KG+ + APE G NY +
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA--CDI-QTHMT--NNKGSAAWMAPEVFEGSNY--SE 183
Query: 262 KCDVYSFGMVLFEIVGRRR 280
KCDV+S+G++L+E++ RR+
Sbjct: 184 KCDVFSWGIILWEVITRRK 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FG V K ++ +A+K + R A F+ E+ + R H N+V+LYG C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL 71
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA--IGTAKGLVYLHEECQQRIIHY 203
+ LV EY E GSL L G + + H ++ + ++G+ YLH + +IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 204 DIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG-NYPITH 261
D+KP N+LL A + K+ DFG A CD +TH+T KG+ + APE G NY +
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA--CDI-QTHMT--NNKGSAAWMAPEVFEGSNY--SE 182
Query: 262 KCDVYSFGMVLFEIVGRRR 280
KCDV+S+G++L+E++ RR+
Sbjct: 183 KCDVFSWGIILWEVITRRK 201
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 86 LGFGGFGEVYKGQFPNG-----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+G G FGEVYKG V +A+K L F+ E G +G+ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G ++ EYMENG+LD +L K +L + G A G+ YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNY 168
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+H D+ N+L+++N KV+DFGL++ L D + T SG K ++APE +S
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR-KF 227
Query: 260 THKCDVYSFGMVLFEIV 276
T DV+SFG+V++E++
Sbjct: 228 TSASDVWSFGIVMWEVM 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + K+A+K L G ++ E F+ E + + H LV+LY
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKP--GTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 145 HDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ RA++ L ++A A G+ Y+ + IH
Sbjct: 74 SEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ K+ADFGLA+L + N+ G K ++APE L G + I K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTI--K 186
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV+SFG++L E+V + R G + V E+ E+ C I
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNN------REVLEQVERGYRMPCPQDCPIS------ 234
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
L + + C + PE+RP + LE
Sbjct: 235 ---LHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 42 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 155
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + + V Y +L + C
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM---VGRGYLSPDLSKVRSNC------- 265
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLP 359
KA + M C++ ++RP ++ +E + LP
Sbjct: 266 PKAMKRLMAE--CLKKKRDERPLFPQILASIELLARSLP 302
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 262 KCDVYSFGMVLFEIV 276
+ DVY+FG+VL+E++
Sbjct: 217 QSDVYAFGIVLYELM 231
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 17 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 130
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 233
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 277
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 236
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 236
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 231
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA + R G+ + APE + P +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 231
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
RLG G FGEV+ G + N K+AVK L G ++ + F+ E + H LVRLY
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKP--GTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRA-IEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ ++ EYM GSL +L + + KL + + A+G+ Y+ ++ IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 134
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-GNYPITHK 262
D++ NVL+ + K+ADFGLA++ + N+ + G K ++APE ++ G + I K
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGCFTI--K 191
Query: 263 CDVYSFGMVLFEIV 276
DV+SFG++L+EIV
Sbjct: 192 SDVWSFGILLYEIV 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 35 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 148
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA R G+ + APE + P +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 251
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 295
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 22/279 (7%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA R G+ + APE + P +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + + V Y +L + C
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM---VGRGYLSPDLSKVRSNC------- 266
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLP 359
KA + M C++ ++RP ++ +E + LP
Sbjct: 267 PKAMKRLMAE--CLKKKRDERPLFPQILASIELLARSLP 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-FMAEVGTIGRTYHINLVRLYGF 143
R+G G FG VYKG++ V AVK+LN + Q F EVG + +T H+N++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ A+V ++ E SL +L + E KL +IA TA+G+ YLH + IIH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF--LSGNYPITH 261
D+K N+ L + + K+ DFGLA R G+ + APE + P +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ DVY+FG+VL+E++ G+ + + + + ++G G D
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----------------IFMVGRGYLSPDL 231
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVVEVLP 359
K + C A+ C++ ++RP ++ +E + LP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +AVK++ G ++E++F E T+ + H LV+ YG C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
++ +V EY+ NG L YL + +E +L E+ +G+ +L + IH D+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L+D + KV+DFG+ + + +V+ G K +SAPE + + K DV
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFH-YFKYSSKSDV 188
Query: 266 YSFGMVLFEI 275
++FG++++E+
Sbjct: 189 WAFGILMWEV 198
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 75 VSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 187
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 188 KSDVWSFGILLTELTTKGR 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 72 VSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ G K ++APE L G + I
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTI-- 184
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 185 KSDVWSFGILLTELTTKGR 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI--K 361
Query: 263 CDVYSFGMVLFEIVGRRR 280
DV+SFG++L E+ + R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI--K 361
Query: 263 CDVYSFGMVLFEIVGRRR 280
DV+SFG++L E+ + R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 71 VSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 183
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 184 KSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 73 VSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 185
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 186 KSDVWSFGILLTELTTKGR 204
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K+LN G A +FM E + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C + LV + M +G L Y+ K I + L + AKG++YL E +R+
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+ NVL+ + K+ DFGLA+L + ++ G K + A E + T
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK-FT 197
Query: 261 HKCDVYSFGMVLFEIV 276
H+ DV+S+G+ ++E++
Sbjct: 198 HQSDVWSYGVTIWELM 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K+LN G A +FM E + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C + LV + M +G L Y+ K I + L + AKG++YL E +R+
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRL 161
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+ NVL+ + K+ DFGLA+L + ++ G K + A E + T
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK-FT 220
Query: 261 HKCDVYSFGMVLFEIV 276
H+ DV+S+G+ ++E++
Sbjct: 221 HQSDVWSYGVTIWELM 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI--K 361
Query: 263 CDVYSFGMVLFEIVGRRR 280
DV+SFG++L E+ + R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + N K+AVK L G ++ + F+ E + H LVRLY
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKP--GTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRA-IEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+ ++ E+M GSL +L + + KL + + A+G+ Y+ ++ IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-GNYPITHK 262
D++ NVL+ + K+ADFGLA++ + N+ + G K ++APE ++ G + I K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGCFTI--K 190
Query: 263 CDVYSFGMVLFEIV 276
+V+SFG++L+EIV
Sbjct: 191 SNVWSFGILLYEIV 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 332 SEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI--K 444
Query: 263 CDVYSFGMVLFEIVGRRR 280
DV+SFG++L E+ + R
Sbjct: 445 SDVWSFGILLTELTTKGR 462
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L +++ A G+ Y+ + +H
Sbjct: 79 VSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 191
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 192 KSDVWSFGILLTELTTKGR 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D+ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 11/198 (5%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKP--GNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ + +V EYM GSL +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 250 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D++ N+L+ N KVADFGL +L + N+ + G K ++APE L G + I K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI--K 362
Query: 263 CDVYSFGMVLFEIVGRRR 280
DV+SFG++L E+ + R
Sbjct: 363 SDVWSFGILLTELTTKGR 380
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM G L +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM GSL +L G+ + + +L +++ A G+ Y+ + +H
Sbjct: 79 VSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ G K ++APE L G + I
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAPEAALYGRFTI-- 191
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 192 KSDVWSFGILLTELTTKGR 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 84 TRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEV+ G + ++A+K L G ++ E F+ E + + H LV+LY
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ + +V EYM G L +L G+ + + +L ++A A G+ Y+ + +H
Sbjct: 82 VSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITH 261
D++ N+L+ N KVADFGLA+L + N+ + G K ++APE L G + I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 262 KCDVYSFGMVLFEIVGRRR 280
K DV+SFG++L E+ + R
Sbjct: 195 KSDVWSFGILLTELTTKGR 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 15/216 (6%)
Query: 65 EKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMA 124
+KP + ++ + +LG G FGEV+ + K+AVK + G ++ E F+A
Sbjct: 2 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLA 59
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLF---GKKRAIEWEKLHEI 181
E + H LV+L+ + + ++ E+M GSL +L G K+ + KL +
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDF 116
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY 241
+ A+G+ ++ Q+ IH D++ N+L+ A+ K+ADFGLA++ + N+ + G
Sbjct: 117 SAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGA 172
Query: 242 KGTPGYSAPEFLS-GNYPITHKCDVYSFGMVLFEIV 276
K ++APE ++ G++ I K DV+SFG++L EIV
Sbjct: 173 KFPIKWTAPEAINFGSFTI--KSDVWSFGILLMEIV 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 15/216 (6%)
Query: 65 EKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMA 124
+KP + ++ + +LG G FGEV+ + K+AVK + G ++ E F+A
Sbjct: 175 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLA 232
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLF---GKKRAIEWEKLHEI 181
E + H LV+L+ + + ++ E+M GSL +L G K+ + KL +
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDF 289
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY 241
+ A+G+ ++ Q+ IH D++ N+L+ A+ K+ADFGLA++ + N+ + G
Sbjct: 290 SAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGA 345
Query: 242 KGTPGYSAPEFLS-GNYPITHKCDVYSFGMVLFEIV 276
K ++APE ++ G++ I K DV+SFG++L EIV
Sbjct: 346 KFPIKWTAPEAINFGSFTI--KSDVWSFGILLMEIV 379
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGLA+ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 140
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 199
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 200 SASDVWSYGIVLWEVM 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 157
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 158 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 216
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 217 SASDVWSYGIVLWEVM 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 167
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 226
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 227 SASDVWSYGIVLWEVM 242
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 86 LGFGGFGEVYKGQFPNGVK----IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV +G+ K +A+K L +F++E +G+ H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G + ++ E+MENG+LD +L +L + G A G+ YL E +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYV 138
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNK---THVTISGYKGTPGYSAPEFLSGNYP 258
H D+ N+L+++N KV+DFGL++ + N T+ + G K ++APE ++
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR-K 197
Query: 259 ITHKCDVYSFGMVLFEIV 276
T D +S+G+V++E++
Sbjct: 198 FTSASDAWSYGIVMWEVM 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G FGEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T +G K ++APE L+ N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI A G + P V+E EK GC EK
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC------PEK 238
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 239 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGFGGFGEVYKGQF----PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G GEV G+ V +A+K L F++E +G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G + +V EYMENGSLD +L +L + G G+ YL + +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YV 173
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ NVL+D+N KV+DFGL++ L D T +G K ++APE ++ +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR-TFS 232
Query: 261 HKCDVYSFGMVLFEIVG 277
DV+SFG+V++E++
Sbjct: 233 SASDVWSFGVVMWEVLA 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL + L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 86 LGFGGFGEVYKGQFPNGVK----IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV +G+ K +A+K L +F++E +G+ H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G + ++ E+MENG+LD +L +L + G A G+ YL E +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYV 140
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNK---THVTISGYKGTPGYSAPEFLSGNYP 258
H D+ N+L+++N KV+DFGL++ + N T + G K ++APE ++
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK- 199
Query: 259 ITHKCDVYSFGMVLFEIV 276
T D +S+G+V++E++
Sbjct: 200 FTSASDAWSYGIVMWEVM 217
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 86 LGFGGFGEVYKGQF----PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G GEV G+ V +A+K L F++E +G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G + +V EYMENGSLD +L +L + G G+ YL + +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YV 173
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ NVL+D+N KV+DFGL++ L D T +G K ++APE ++ +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR-TFS 232
Query: 261 HKCDVYSFGMVLFEIVG 277
DV+SFG+V++E++
Sbjct: 233 SASDVWSFGVVMWEVLA 249
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T +G K ++APE L+ N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI A G + P V+E EK GC EK
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC------PEK 238
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 239 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T +G K ++APE L+ N + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN-KFSIK 190
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI A G + P V+E EK GC EK
Sbjct: 191 SDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRMERPEGC------PEK 238
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 239 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEE--QFMAEVGTIGRTYHINLVRLYG 142
LG G FG+V G+ G K+AVK+LNR R + + E+ + H ++++LY
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+V EY+ G L Y+ R E E + G+ Y H + ++H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES-RRLFQQILSGVDYCH---RHMVVH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+KPENVLLDA+ + K+ADFGL+ + + + G+P Y+APE +SG +
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 263 CDVYSFGMVLFEIV 276
D++S G++L+ ++
Sbjct: 197 VDIWSSGVILYALL 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 245
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 246 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V E MENGSLD +L +L + G A G+ YL + +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 140
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 141 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 199
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 200 SASDVWSYGIVLWEVM 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYN-KFSIK 193
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 241
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 242 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 245
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 246 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G+ + +A+K L F++E +G+ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ EYMENGSLD +L +L + G G+ YL + +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAV 153
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFG+++ L D + T G K ++APE ++ T
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFT 212
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
DV+S+G+V++E+ + + + W+ + + A IEE +
Sbjct: 213 SASDVWSYGIVMWEV--------------MSYGERPYWDMSNQDVIKA------IEEGYR 252
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVV 355
C +AL C Q DRP ++ ML+ ++
Sbjct: 253 LPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 242
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 243 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G+ + +A+K L F+ E +G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V EYMENGSLD +L +L + G + G+ YL + +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYV 146
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K ++APE ++ T
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR-KFT 205
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
DV+S+G+V++E+V + + WE + + A +EE +
Sbjct: 206 SASDVWSYGIVMWEVVS--------------YGERPYWEMTNQDVIKA------VEEGYR 245
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVV 355
+ C AL+ C Q RP ++ ML+ ++
Sbjct: 246 LPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V E MENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 245
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 246 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 138
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 196
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 197 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 244
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 245 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 245
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 246 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 205
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 206 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 253
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 254 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 284
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 242
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 243 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G+ + +A+K L F++E +G+ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ EYMENGSLD +L +L + G G+ YL + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 138
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFG+++ L D + T G K ++APE ++ T
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFT 197
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
DV+S+G+V++E+ + + + W+ + + A IEE +
Sbjct: 198 SASDVWSYGIVMWEV--------------MSYGERPYWDMSNQDVIKA------IEEGYR 237
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVV 355
C +AL C Q DRP ++ ML+ ++
Sbjct: 238 LPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKG--QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + P+ +I+V + +G +++ F+ E +G+ H N++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V E MENGSLD +L +L + G A G+ YL + +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYV 169
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL++ L D + T G K +++PE ++ T
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR-KFT 228
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+VL+E++
Sbjct: 229 SASDVWSYGIVLWEVM 244
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 194
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 242
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 243 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G+ + +A+K L F++E +G+ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ EYMENGSLD +L +L + G G+ YL + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 132
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFG+++ L D + T G K ++APE ++ T
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFT 191
Query: 261 HKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
DV+S+G+V++E+ + + + W+ + + A IEE +
Sbjct: 192 SASDVWSYGIVMWEV--------------MSYGERPYWDMSNQDVIKA------IEEGYR 231
Query: 321 EKAKRLCMVALW-----CVQDSPEDRPPMSAVIKMLEGVV 355
C +AL C Q DRP ++ ML+ ++
Sbjct: 232 LPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 24/270 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 192
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 240
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
L M A W Q +P DRP + + + E
Sbjct: 241 VYEL-MRACW--QWNPSDRPSFAEIHQAFE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T +G K ++APE L+ N + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN-KFSIK 193
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 241
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 242 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T +G K ++APE L+ N + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTAPESLAYN-KFSIK 197
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEK 322
DV++FG++L+EI + G S V+E EK GC EK
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPEGC------PEK 245
Query: 323 AKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
L M A W Q +P DRP + + + E + +
Sbjct: 246 VYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 276
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 25/196 (12%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+LG G FGEV+ + K+AVK + G ++ E F+AE + H LV+L+
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 145 HDQHMTALVYEYMENGSLDGYLF---GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
+ + ++ E+M GSL +L G K+ + KL + + A+G+ ++ Q+ I
Sbjct: 247 TKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYI 300
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-GNYPIT 260
H D++ N+L+ A+ K+ADFGLA++ G K ++APE ++ G++ I
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTI- 348
Query: 261 HKCDVYSFGMVLFEIV 276
K DV+SFG++L EIV
Sbjct: 349 -KSDVWSFGILLMEIV 363
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 190
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 244
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 245 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 286
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKPFRYLDL 369
E R + RPPM A+ ++L+ +V PP P L
Sbjct: 287 ETPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVNEPPPKLPSAVFSL 334
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDI 188
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 189 WAFGVLMWEI 198
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYS-KFSSKSDI 189
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 190 WAFGVLMWEI 199
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 32/278 (11%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 341
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
++ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 399
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFP----KHVWEEYEKCELGAMILGCGIEEK 318
DV++FG++L+EI AT + +P V+E EK GC
Sbjct: 400 SDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC----- 444
Query: 319 DKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
EK L M A W Q +P DRP + + + E + +
Sbjct: 445 -PEKVYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 478
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 31/283 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 155
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 209
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 210 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 251
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKP 363
E R + + RPPM A+ ++L+ +V PP P
Sbjct: 252 ETPPRPRTPGRPLNKFGMDSRPPM-AIFELLDYIVNEPPPKLP 293
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 182
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 224
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKP 363
E R + RPPM A+ ++L+ +V PP P
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVNEPPPKLP 266
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 182
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 224
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKP 363
E R + RPPM A+ ++L+ +V PP P
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVNEPPPKLP 266
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G+ V +A+K L F+ E +G+ H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +V E+MENG+LD +L +L + G A G+ YL + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYV 167
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV-TISGYKGTPGYSAPEFLSGNYPIT 260
H D+ N+L+++N KV+DFGL+++ + + V T +G K ++APE + T
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR-KFT 226
Query: 261 HKCDVYSFGMVLFEIV 276
DV+S+G+V++E++
Sbjct: 227 SASDVWSYGIVMWEVM 242
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDI 184
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 185 WAFGVLMWEI 194
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 82 YSTRLGFGGFGEVY-KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ +LG G FG+V+ + +G++ +K +N++ ++ EQ AE+ + H N++++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLF---GKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
+ D H +V E E G L + + +A+ + E+ L Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---S 142
Query: 198 QRIIHYDIKPENVLLD--ANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
Q ++H D+KPEN+L + SP K+ DFGLA+L ++ H T + GT Y APE
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-KSDEHSTNAA--GTALYMAPEVFK 199
Query: 255 GNYPITHKCDVYSFGMVLF 273
+ +T KCD++S G+V++
Sbjct: 200 RD--VTFKCDIWSAGVVMY 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDI 189
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 190 WAFGVLMWEI 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 182
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 224
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKP 363
E R + RPPM A+ ++L+ +V PP P
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVNEPPPKLP 266
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 182
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDK 320
+ D++S G+ L E+ VGR P +E E ++ GC +E
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP------------IPPPDAKELE------LMFGCQVEGDAA 224
Query: 321 EKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKP 363
E R + RPPM A+ ++L+ +V PP P
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPM-AIFELLDYIVNEPPPKLP 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 32/278 (11%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 338
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
++ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 396
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFP----KHVWEEYEKCELGAMILGCGIEEK 318
DV++FG++L+EI AT + +P V+E EK GC
Sbjct: 397 SDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC----- 441
Query: 319 DKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
EK L M A W Q +P DRP + + + E + +
Sbjct: 442 -PEKVYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 475
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ ++ ++ G K +S PE L + + K D+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLMYS-KFSSKSDI 204
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 205 WAFGVLMWEI 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 32/278 (11%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY+G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + ++ E+M G+L YL ++ + L +A + + YL ++ IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 380
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
++ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-KFSIK 438
Query: 263 CDVYSFGMVLFEIVGRRRNAIVGATESLDWFP----KHVWEEYEKCELGAMILGCGIEEK 318
DV++FG++L+EI AT + +P V+E EK GC
Sbjct: 439 SDVWAFGVLLWEI----------ATYGMSPYPGIDLSQVYELLEKDYRMERPEGC----- 483
Query: 319 DKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVE 356
EK L M A W Q +P DRP + + + E + +
Sbjct: 484 -PEKVYEL-MRACW--QWNPSDRPSFAEIHQAFETMFQ 517
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDI 195
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 196 WAFGVLMWEI 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
LG G FG V G++ +A+K++ G ++E++F+ E + H LV+LYG C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDI 205
Q ++ EYM NG L YL + + ++L E+ + + YL ++ +H D+
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDV 265
N L++ KV+DFGL++ + + + G K +S PE L + + K D+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDI 204
Query: 266 YSFGMVLFEI 275
++FG++++EI
Sbjct: 205 WAFGVLMWEI 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEE--QFMAEVGTIGRTYHINLVRLYG 142
LG G FG+V G+ G K+AVK+LNR R + + E+ + H ++++LY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 143 FCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+V EY+ G L Y+ G+ +E +L + + Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH---RHMV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+KPENVLLDA+ + K+ADFGL+ + + T G+P Y+APE +SG
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLYAG 189
Query: 261 HKCDVYSFGMVLFEIV 276
+ D++S G++L+ ++
Sbjct: 190 PEVDIWSCGVILYALL 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + +A+K L F++E +G+ H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ E+MENGSLD +L +L + G A G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYV 157
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCD---RNKTHVTISGYKGTPGYSAPEFLSGNYP 258
H D+ N+L+++N KV+DFGL++ + + T+ + G K ++APE +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-K 216
Query: 259 ITHKCDVYSFGMVLFEIV 276
T DV+S+G+V++E++
Sbjct: 217 FTSASDVWSYGIVMWEVM 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LG G FG+V G+ G K+AVK+LNR R + + E+ + H ++++LY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 143 FCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+V EY+ G L Y+ G+ +E +L + + Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH---RHMV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+KPENVLLDA+ + K+ADFGL+ + + + G+P Y+APE +SG
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRLYAG 189
Query: 261 HKCDVYSFGMVLFEIV 276
+ D++S G++L+ ++
Sbjct: 190 PEVDIWSCGVILYALL 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG+VYK Q V A KV++ E +M E+ + H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
+ ++ ++ E+ G++D + +R + ++ + T L YLH+ +IIH D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPIT 260
+K N+L + K+ADFG++ +T + GTP + APE + S + P
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 261 HKCDVYSFGMVLFEI 275
+K DV+S G+ L E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +GEVY G + + +AVK L + + E+F+ E + H NLV+L G
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKR-AIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + +V EYM G+L YL R + L +A + + YL ++ IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIH 153
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
D+ N L+ N KVADFGL++L + T+ +G K ++APE L+ N + K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-TFSIK 211
Query: 263 CDVYSFGMVLFEI 275
DV++FG++L+EI
Sbjct: 212 SDVWAFGVLLWEI 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 84 TRLGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V K Q P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L KR I E L +++I +GL YL E+ Q I+H
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKHQ--IMH 138
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y APE L G + +
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMAPERLQGTH-YSV 192
Query: 262 KCDVYSFGMVLFEI-VGR 278
+ D++S G+ L E+ VGR
Sbjct: 193 QSDIWSMGLSLVELAVGR 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG+VYK Q V A KV++ E +M E+ + H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
+ ++ ++ E+ G++D + +R + ++ + T L YLH+ +IIH D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPIT 260
+K N+L + K+ADFG++ R + GTP + APE + S + P
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRR--DSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 261 HKCDVYSFGMVLFEI 275
+K DV+S G+ L E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 89 GGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQH 148
G FG V+K Q N +AVK+ + + ++ EV ++ H N+++ G ++
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG--AEKR 89
Query: 149 MTA------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC------ 196
T+ L+ + E GSL +L K + W +L IA A+GL YLHE+
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 197 -QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
+ I H DIK +NVLL N + +ADFGLA + K+ G GT Y APE L G
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 256 NYPITH----KCDVYSFGMVLFEIVGR 278
+ D+Y+ G+VL+E+ R
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 92 GEVY-KGQFPNGVKIAVK-----VLNRNLGRIAEEQ---FMAEVGTIGRTYHINLVRLYG 142
GEV KG F +K+ + ++ + L R EE F+ EV + H N+++ G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + EY++ G+L G + W + A A G+ YLH IIH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLC----------------DRNKTHVTISGYKGTPG 246
D+ N L+ N + VADFGLA+L DR K + + G P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV----GNPY 187
Query: 247 YSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ APE ++G K DV+SFG+VL EI+GR
Sbjct: 188 WMAPEMINGR-SYDEKVDVFSFGIVLCEIIGR 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 67 PVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFP-NGVKIAVKVLNRNL--GRIAEEQ 121
P F F+ Y + LG G FGEV + G + AVKV+++ + +E
Sbjct: 13 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 122 FMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
+ EV + + H N+++LY F D+ LV E G L + +KR E + I
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-I 131
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHV 236
G+ Y+H + +I+H D+KPEN+LL DAN ++ DFGL+ + +K
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK--- 183
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
+ GT Y APE L G Y KCDV+S G++L+
Sbjct: 184 KMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG+VYK Q V A KV++ E +M E+ + H N+V+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
+ ++ ++ E+ G++D + +R + ++ + T L YLH+ +IIH D
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPIT 260
+K N+L + K+ADFG++ R + GTP + APE + S + P
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 261 HKCDVYSFGMVLFEI 275
+K DV+S G+ L E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++A+K++++ L + ++ EV + H N+V+L+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE---KLHEIAIGTAKGLVYLHEECQQRI 200
+ L+ EY G + YL R E E K +I + Y H Q+RI
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QKRI 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISG----YKGTPGYSAPEFLSGN 256
+H D+K EN+LLDA+ + K+ADFG + T+ G + G+P Y+APE G
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFCGSPPYAAPELFQGK 185
Query: 257 YPITHKCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 186 KYDGPEVDVWSLGVILYTLV 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FGEV G + +A+K L F++E +G+ H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ E+MENGSLD +L +L + G A G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYV 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCD---RNKTHVTISGYKGTPGYSAPEFLSGNYP 258
H + N+L+++N KV+DFGL++ + + T+ + G K ++APE +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-K 190
Query: 259 ITHKCDVYSFGMVLFEIV 276
T DV+S+G+V++E++
Sbjct: 191 FTSASDVWSYGIVMWEVM 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 12/213 (5%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 131
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + GT Y +PE L G + +
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE-----FVGTRSYMSPERLQGTH-YSV 185
Query: 262 KCDVYSFGMVLFEI-VGRRRNAIVGATESLDWF 293
+ D++S G+ L E+ VGR + E LD+
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 82 YSTRLGFGGFGEVYKGQF---PNGVKIAVKVLNRNLGRIAE----EQFMAEVGTIGRTYH 134
Y ++G GGFG V+KG+ + V I +L + G ++F EV + H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
N+V+LYG H+ +V E++ G L L K I+W + + A G+ Y+
Sbjct: 83 PNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 195 ECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
+ I+H D++ N+ L +A KVADFGL++ H ++SG G + A
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVH-SVSGLLGNFQWMA 194
Query: 250 PEFLSG-NYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE + T K D YSF M+L+ I+ D + Y K +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILY--------TILTGEGPFDEY------SYGKIKFIN 240
Query: 309 MILGCGIEEKDKEKA-KRLCMVALWCVQDSPEDRPPMSAVIKML 351
MI G+ E RL V C P+ RP S ++K L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 67 PVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFP-NGVKIAVKVLNRNL--GRIAEEQ 121
P F F+ Y + LG G FGEV + G + AVKV+++ + +E
Sbjct: 36 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 122 FMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
+ EV + + H N+++LY F D+ LV E G L + +KR E + I
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-I 154
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHV 236
G+ Y+H + +I+H D+KPEN+LL DAN ++ DFGL+ + +K
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK--- 206
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
+ GT Y APE L G Y KCDV+S G++L+
Sbjct: 207 KMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 67 PVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFP-NGVKIAVKVLNRNL--GRIAEEQ 121
P F F+ Y + LG G FGEV + G + AVKV+++ + +E
Sbjct: 37 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 122 FMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
+ EV + + H N+++LY F D+ LV E G L + +KR E + I
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-I 155
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHV 236
G+ Y+H + +I+H D+KPEN+LL DAN ++ DFGL+ + +K
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK--- 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
+ GT Y APE L G Y KCDV+S G++L+
Sbjct: 208 KMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 242
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++A+K++++ L + ++ EV + H N+V+L+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE---KLHEIAIGTAKGLVYLHEECQQRI 200
+ L+ EY G + YL R E E K +I + Y H Q+RI
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QKRI 135
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV--TISGYKGTPGYSAPEFLSGNYP 258
+H D+K EN+LLDA+ + K+ADFG + N+ V + + G P Y+APE G
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 259 ITHKCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 191 DGPEVDVWSLGVILYTLV 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 88 FGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHD 146
G FG+VYK Q V A KV++ E +M E+ + H N+V+L +
Sbjct: 20 LGDFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 147 QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIK 206
++ ++ E+ G++D + +R + ++ + T L YLH+ +IIH D+K
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLK 135
Query: 207 PENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPITHK 262
N+L + K+ADFG++ R S + GTP + APE + S + P +K
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 263 CDVYSFGMVLFEI 275
DV+S G+ L E+
Sbjct: 195 ADVWSLGITLIEM 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAE----EQFMAEVGTIGRTYHINLVRLY 141
+G G FG VY G++ + + ++ ++L RI E E F+ E + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 142 GF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G + + ++ YM +G L ++ +R + L + A+G+ YL E Q+
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKF 145
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTP-GYSAPEFLSGNYP 258
+H D+ N +LD +F+ KVADFGLA+ + DR V + P ++A E L Y
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ-TYR 204
Query: 259 ITHKCDVYSFGMVLFEIVGR 278
T K DV+SFG++L+E++ R
Sbjct: 205 FTTKSDVWSFGVLLWELLTR 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 67 PVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFP-NGVKIAVKVLNRNL--GRIAEEQ 121
P F F+ Y + LG G FGEV + G + AVKV+++ + +E
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 122 FMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
+ EV + + H N+++LY F D+ LV E G L + +KR E + I
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-I 137
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHV 236
G+ Y+H + +I+H D+KPEN+LL DAN ++ DFGL+ + +K
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK--- 189
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
+ GT Y APE L G Y KCDV+S G++L+
Sbjct: 190 KMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ--FMAE 125
+SL NY LG G FG+V G K+A+K++N+ + ++ Q E
Sbjct: 5 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 64
Query: 126 VGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
+ + H ++++LY + +V EY N D Y+ + + E E A
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQE-----ARRF 118
Query: 186 AKGLVYLHEECQQ-RIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKG 243
+ ++ E C + +I+H D+KPEN+LLD + + K+ADFGL+ + D N + G
Sbjct: 119 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 174
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
+P Y+APE +SG + DV+S G++L+ ++ RR
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G P Y+APE G
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDAFCGAPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG V+KG + P G + + +KV+ GR + + + IG H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C + LV +Y+ GSL ++ + A+ + L + AKG+ YL E +
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGM 154
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-GNYPI 259
+H ++ NVLL + +VADFG+A L + + S K + A E + G Y
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY-- 212
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 213 THQSDVWSYGVTVWELM 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ--FMAE 125
+SL NY LG G FG+V G K+A+K++N+ + ++ Q E
Sbjct: 4 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 63
Query: 126 VGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
+ + H ++++LY + +V EY N D Y+ + + E E A
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQE-----ARRF 117
Query: 186 AKGLVYLHEECQQ-RIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKG 243
+ ++ E C + +I+H D+KPEN+LLD + + K+ADFGL+ + D N + G
Sbjct: 118 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----G 173
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
+P Y+APE +SG + DV+S G++L+ ++ RR
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLYG 142
LG G FG+V G K+A+K++N+ + ++ Q E+ + H ++++LY
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ-RII 201
+ +V EY N D Y+ + + E E A + ++ E C + +I+
Sbjct: 72 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQE-----ARRFFQQIISAVEYCHRHKIV 125
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+KPEN+LLD + + K+ADFGL+ + D N + G+P Y+APE +SG
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAG 181
Query: 261 HKCDVYSFGMVLFEIVGRR 279
+ DV+S G++L+ ++ RR
Sbjct: 182 PEVDVWSCGVILYVMLCRR 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRN-LGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAE--VGTIGRTYHINLVRLYG 142
LG G FG+V + K+A+K ++R L + ++ E + + H ++++LY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE--KLHEIAIGTAKGLVYLHEECQQRI 200
+V EY G L Y+ KKR E E + + I + Y H + +I
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE---YCH---RHKI 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+H D+KPEN+LLD N + K+ADFGL+ + D N + G+P Y+APE ++G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKLYA 185
Query: 260 THKCDVYSFGMVLF-EIVGR 278
+ DV+S G+VL+ +VGR
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 21/200 (10%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-----FMAEVGTIGRTYHINLVR 139
++G G +G VYK + G +A+K + + AE++ + E+ + +H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLD----AEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L H + LV+E+ME L L K ++ ++ +G+ + H Q R
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHR 139
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KP+N+L++++ + K+ADFGLA+ + R+ TH ++ + Y AP+ L G+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGS 194
Query: 257 YPITHKCDVYSFGMVLFEIV 276
+ D++S G + E++
Sbjct: 195 KKYSTSVDIWSIGCIFAEMI 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLYG 142
LG G FG+V G K+A+K++N+ + ++ Q E+ + H ++++LY
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ-RII 201
+ +V EY N D Y+ + + E E A + ++ E C + +I+
Sbjct: 76 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQE-----ARRFFQQIISAVEYCHRHKIV 129
Query: 202 HYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
H D+KPEN+LLD + + K+ADFGL+ + D N + G+P Y+APE +SG
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLYAG 185
Query: 261 HKCDVYSFGMVLFEIVGRR 279
+ DV+S G++L+ ++ RR
Sbjct: 186 PEVDVWSCGVILYVMLCRR 204
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 21/200 (10%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ-----FMAEVGTIGRTYHINLVR 139
++G G +G VYK + G +A+K + + AE++ + E+ + +H N+V
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLD----AEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L H + LV+E+ME L L K ++ ++ +G+ + H Q R
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHR 139
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KP+N+L++++ + K+ADFGLA+ + R+ TH ++ + Y AP+ L G+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGS 194
Query: 257 YPITHKCDVYSFGMVLFEIV 276
+ D++S G + E++
Sbjct: 195 KKYSTSVDIWSIGCIFAEMI 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 182
Query: 262 KCDVYSFGMVLFEI-VGR 278
+ D++S G+ L E+ VGR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 43/296 (14%)
Query: 86 LGFGGFGEVYKGQFPN------GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V+ + N + +AVK L ++ A + F E + H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF-----------GKKRAIEWE----KLHEIAIG 184
YG C D +V+EYM++G L+ +L G+ R + E ++ IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKT-HVTISGYKG 243
A G+VYL Q +H D+ N L+ AN K+ DFG+++ D T + + G+
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTM 196
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEK 303
P P T + DV+SFG++L+EI + K W +
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---------------YGKQPWFQLSN 241
Query: 304 CELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLP 359
E+ I + E+ + K + V L C Q P+ R + + K+L + + P
Sbjct: 242 TEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG V+KG + P G + + +KV+ GR + + + IG H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C + LV +Y+ GSL ++ + A+ + L + AKG+ YL E +
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGM 136
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-GNYPI 259
+H ++ NVLL + +VADFG+A L + + S K + A E + G Y
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY-- 194
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 195 THQSDVWSYGVTVWELM 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 121/284 (42%), Gaps = 36/284 (12%)
Query: 82 YSTRLGFGGFGEVYKGQF---PNGVKIAVKVLNRNLGRIAE----EQFMAEVGTIGRTYH 134
Y ++G GGFG V+KG+ + V I +L + G ++F EV + H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
N+V+LYG H+ +V E++ G L L K I+W + + A G+ Y+
Sbjct: 83 PNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 195 ECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
+ I+H D++ N+ L +A KVADFG ++ H ++SG G + A
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVH-SVSGLLGNFQWMA 194
Query: 250 PEFLSG-NYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE + T K D YSF M+L+ I+ D + Y K +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILY--------TILTGEGPFDEY------SYGKIKFIN 240
Query: 309 MILGCGIEEKDKEKA-KRLCMVALWCVQDSPEDRPPMSAVIKML 351
MI G+ E RL V C P+ RP S ++K L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AV+++++ L + ++ EV + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---K 134
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TR 193
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 194 TFSHASDTWMFGVTLWEM 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 121/284 (42%), Gaps = 36/284 (12%)
Query: 82 YSTRLGFGGFGEVYKGQF---PNGVKIAVKVLNRNLGRIAE----EQFMAEVGTIGRTYH 134
Y ++G GGFG V+KG+ + V I +L + G ++F EV + H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
N+V+LYG H+ +V E++ G L L K I+W + + A G+ Y+
Sbjct: 83 PNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 195 ECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
+ I+H D++ N+ L +A KVADF L++ H ++SG G + A
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVH-SVSGLLGNFQWMA 194
Query: 250 PEFLSG-NYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE + T K D YSF M+L+ I+ D + Y K +
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILY--------TILTGEGPFDEY------SYGKIKFIN 240
Query: 309 MILGCGIEEKDKEKA-KRLCMVALWCVQDSPEDRPPMSAVIKML 351
MI G+ E RL V C P+ RP S ++K L
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK-TR 199
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 200 TFSHASDTWMFGVTLWEM 217
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 27 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 83
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 201 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK-TR 189
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 190 TFSHASDTWMFGVTLWEM 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 84 TRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+ LG G G V+K P+G+ +A K+++ + Q + E+ + +V YG
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ ++ E+M+ GSLD L R I + L +++I KGL YL E + +I+H
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE--KHKIMH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+L+++ K+ DFG++ +L D + + GT Y +PE L G + +
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH-YSV 201
Query: 262 KCDVYSFGMVLFEI-VGR 278
+ D++S G+ L E+ VGR
Sbjct: 202 QSDIWSMGLSLVEMAVGR 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G + VYKG GV +A+K + + + E+ + H N+VRLY
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 144 CHDQHMTALVYEYMENG---SLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
H ++ LV+E+M+N +D G R +E + +GL + HE +
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NK 128
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I+H D+KP+N+L++ K+ DFGLA+ T S T Y AP+ L G+
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTY 186
Query: 260 THKCDVYSFGMVLFEIV 276
+ D++S G +L E++
Sbjct: 187 STSIDIWSCGCILAEMI 203
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AV+++++ L + ++ EV + H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDEFCGSPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TR 189
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
+H D + FG+ L+E+ + +G S
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGR-IAE--EQFMAEVGTIGRTYHINLVRLYG 142
+G GGFG+VY+ F G ++AVK + I++ E E H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + LV E+ G L+ L GK+ I + L A+ A+G+ YLH+E IIH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNYLHDEAIVPIIH 131
Query: 203 YDIKPENVLL--------DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
D+K N+L+ +N K+ DFGLA+ R Y + APE +
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY----AWMAPEVIR 187
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
+ + DV+S+G++L+E++
Sbjct: 188 ASM-FSKGSDVWSYGVLLWELL 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---K 134
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TR 193
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 194 TFSHASDTWMFGVTLWEM 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 67 PVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFP-NGVKIAVKVLNRNL--GRIAEEQ 121
P F F+ Y + LG G FGEV + G + AVKV+++ + +E
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 122 FMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
+ EV + + H N+ +LY F D+ LV E G L + +KR E + I
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-I 131
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLL-----DANFSPKVADFGLAKLCDRNKTHV 236
G+ Y H + +I+H D+KPEN+LL DAN ++ DFGL+ TH
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS-------THF 179
Query: 237 TISGYK----GTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
S GT Y APE L G Y KCDV+S G++L+
Sbjct: 180 EASKKXKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILY 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TR 199
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 200 TFSHASDTWMFGVTLWEM 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLV 138
N LG G FGEV K + + AVKV+N+ + + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L+ D +V E G L + +KR E + I G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGITYMH---KH 140
Query: 199 RIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I+H D+KPEN+LL++ + K+ DFGL+ +N + GT Y APE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 256 NYPITHKCDVYSFGMVLF 273
Y KCDV+S G++L+
Sbjct: 198 TYD--EKCDVWSAGVILY 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 85 RLGFGGFGEVYKGQF--PNG--VKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLV 138
+LG G FG V +G++ P+G V +AVK L ++ E + F+ EV + H NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
RLYG M +V E GSL L + L A+ A+G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---K 130
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNY 257
R IH D+ N+LL K+ DFGL + +N H + ++ P + APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TR 189
Query: 258 PITHKCDVYSFGMVLFEI 275
+H D + FG+ L+E+
Sbjct: 190 TFSHASDTWMFGVTLWEM 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P+G + +A+KVL N A ++ + E + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C + LV + M G L ++ + + + L + AKG+ YL + R+
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+ NVL+ + K+ DFGLA+L D ++T G K + A E + T
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR-FT 199
Query: 261 HKCDVYSFGMVLFEIV 276
H+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV H N+V+L+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKFRQIVSAVQYCHQKFIVH 136
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G P Y+APE G
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNK----LDAFCGAPPYAAPELFQGKKYDGP 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV + H N+V+L+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL R E E A + +V + C Q+ I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKFRQIVSAVQYCHQKYIVH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLD + + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNK----LDTFCGSPPYAAPELFQGKKYDGP 193
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S G++L+ +V
Sbjct: 194 EVDVWSLGVILYTLV 208
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
LN+ ++G G FGEV+ G+ + +AVK L + +F+ E + +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+VRL G C + +V E ++ G +L + + + L ++ A G+ YL
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEF 252
+C IH D+ N L+ K++DFG+++ + + + G + P ++APE
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEA 286
Query: 253 LS-GNYPITHKCDVYSFGMVLFE 274
L+ G Y + + DV+SFG++L+E
Sbjct: 287 LNYGRY--SSESDVWSFGILLWE 307
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRN-LGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G F +V + G ++AVK++++ L + ++ EV + H N+V+L+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
+ LV EY G + YL A W K E A + +V + C Q+ I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLV----AHGWMKEKE-ARAKFRQIVSAVQYCHQKFIVH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN+LLDA+ + K+ADFG + + NK + + G+P Y+APE G
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDGP 185
Query: 262 KCDVYSFGMVLFEIVG 277
+ DV+S G++L+ +V
Sbjct: 186 EVDVWSLGVILYTLVS 201
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 103
Query: 146 DQHMTA-------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 261
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 65
Query: 146 DQH-------MTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 64
Query: 146 DQH-------MTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 84
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 202 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 233
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 25 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 81
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 199 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 230
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 90
Query: 146 DQHMTA-------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 248
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 47 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 103
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 221 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 252
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 70
Query: 146 DQH-------MTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 228
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 20 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 76
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 194 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 46 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 102
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 163 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 220 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 251
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 27 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 83
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 201 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 232
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 29/222 (13%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G FGEV++G++ G ++AVK+ + EE+ I +T + + GF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIA 67
Query: 146 DQHMTA-------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
+ LV +Y E+GSL YL + + E + ++A+ TA GL +LH E
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N + +AD GLA D + I+ GT Y APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 252 FLSGNYPITH-----KCDVYSFGMVLFEIVGRRRNAIVGATE 288
L + + H + D+Y+ G+V +EI RR +I G E
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIA--RRCSIGGIHE 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 84
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 202 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 26 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 82
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 200 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 79
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ YL ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 197 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 228
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLV 138
N LG G FGEV K + + AVKV+N+ + + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L+ D +V E G L + +KR E + I G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGITYMH---KH 140
Query: 199 RIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I+H D+KPEN+LL++ + K+ DFGL+ +N + GT Y APE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 256 NYPITHKCDVYSFGMVLF 273
Y KCDV+S G++L+
Sbjct: 198 TYD--EKCDVWSAGVILY 213
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 81 NYSTRLGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLV 138
N LG G FGEV K + + AVKV+N+ + + + EV + + H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L+ D +V E G L + +KR E + I G+ Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-QVFSGITYMH---KH 140
Query: 199 RIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I+H D+KPEN+LL++ + K+ DFGL+ +N + GT Y APE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 256 NYPITHKCDVYSFGMVLF 273
Y KCDV+S G++L+
Sbjct: 198 TYD--EKCDVWSAGVILY 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
LN+ ++G G FGEV+ G+ + +AVK L + +F+ E + +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+VRL G C + +V E ++ G +L + + + L ++ A G+ YL
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEF 252
+C IH D+ N L+ K++DFG+++ + + G + P ++APE
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGLRQVPVKWTAPEA 286
Query: 253 LS-GNYPITHKCDVYSFGMVLFE 274
L+ G Y + + DV+SFG++L+E
Sbjct: 287 LNYGRY--SSESDVWSFGILLWE 307
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 86 LGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V + G +AVK L + G + E+ + YH ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 141 YGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C DQ +L V EY+ GSL YL + +I +L A +G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGNY 257
IH ++ NVLLD + K+ DFGLAK + + +P + APE L Y
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK-EY 195
Query: 258 PITHKCDVYSFGMVLFEIV 276
+ DV+SFG+ L+E++
Sbjct: 196 KFYYASDVWSFGVTLYELL 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 86 LGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V + G +AVK L + G + E+ + YH ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 141 YGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C DQ +L V EY+ GSL YL + +I +L A +G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGNY 257
IH ++ NVLLD + K+ DFGLAK + + +P + APE L Y
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK-EY 195
Query: 258 PITHKCDVYSFGMVLFEIV 276
+ DV+SFG+ L+E++
Sbjct: 196 KFYYASDVWSFGVTLYELL 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 29 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 85
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 203 KWMALESLQ-TQKFTTKSDVWSFGVLLWELMTR 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 85 RLGFGGFGEVYKGQFPNG-VKIAVKVL-------------NRNLGRIAEEQFMAEVGTIG 130
+LG G +GEV + NG + A+KV+ N+N+ + EE + E+ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY-NEISLLK 101
Query: 131 RTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLV 190
H N+++L+ D+ LV E+ E G L + + + E + + I G+
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN-IMKQILSGIC 160
Query: 191 YLHEECQQRIIHYDIKPENVLLDAN---FSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
YLH + I+H DIKPEN+LL+ + K+ DFGL+ ++ + GT Y
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYY 214
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLF 273
APE L Y KCDV+S G++++
Sbjct: 215 IAPEVLKKKY--NEKCDVWSCGVIMY 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 62 IGREKPVRFTSLQLNNFTSNYSTR---LGFGGFGEV----YKGQFPN-GVKIAVKVLNRN 113
+ +KP T + +F + R LG G FG+V Y + N G ++AVK L
Sbjct: 4 VSEKKPA--TEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE 61
Query: 114 LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQ--HMTALVYEYMENGSLDGYLFGKKR 171
G E+ + YH N+V+ G C + + L+ E++ +GSL YL K
Sbjct: 62 SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN 121
Query: 172 AIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDR 231
I ++ + A+ KG+ YL ++ +H D+ NVL+++ K+ DFGL K +
Sbjct: 122 KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178
Query: 232 NKTHVTISGYKGTPGY-SAPE-FLSGNYPITHKCDVYSFGMVLFEIV 276
+K T+ + +P + APE + + I DV+SFG+ L E++
Sbjct: 179 DKEXXTVKDDRDSPVFWYAPECLMQSKFYIAS--DVWSFGVTLHELL 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG--VEHQLRREVEIQSHLRHPNILRL 77
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L R E ++ A L Y H +R+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-QRTATYITELANALSYCH---SKRV 133
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL +N K+ADFG + ++ GT Y PE + G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMH-D 188
Query: 261 HKCDVYSFGMVLFEIV 276
K D++S G++ +E +
Sbjct: 189 EKVDLWSLGVLCYEFL 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 86 LGFGGFGEVYKGQF---PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG V +G + + +A+KVL + + E+ M E + + + +VRL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + + LV E G L +L GK+ I + E+ + G+ YL E + +H
Sbjct: 78 VCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVH 133
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTI-SGYKGTPGYSAPEFLSGNYPITH 261
D+ NVLL K++DFGL+K + ++ T S K + APE ++ +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR-KFSS 192
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S+G+ ++E +
Sbjct: 193 RSDVWSYGVTMWEAL 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 74
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + C + T GT Y PE + G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT--LSGTLDYLPPEMIEGRMH-D 185
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 186 EKVDLWSLGVLCYEFLVGK 204
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 26 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 82
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 200 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG--VEHQLRREVEIQSHLRHPNILRL 77
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L R E ++ A L Y H +R+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-QRTATYITELANALSYCH---SKRV 133
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL +N K+ADFG + ++ + GT Y PE + G
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH-D 188
Query: 261 HKCDVYSFGMVLFEIV 276
K D++S G++ +E +
Sbjct: 189 EKVDLWSLGVLCYEFL 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 214
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 215 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 257
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 84
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 202 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 87 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 143
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 261 KWMALESLQ-TQKFTTKSDVWSFGVLLWELMTR 292
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 185 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 240
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 241 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 283
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 29 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 85
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 203 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 33 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 89
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 207 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 238
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 86 LGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V + G +AVK L + G + E+ + YH ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 141 YGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C D +L V EY+ GSL YL + +I +L A +G+ YLH Q
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGNY 257
IH D+ NVLLD + K+ DFGLAK + +P + APE L Y
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK-EY 212
Query: 258 PITHKCDVYSFGMVLFEIV 276
+ DV+SFG+ L+E++
Sbjct: 213 KFYYASDVWSFGVTLYELL 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 76 NNFTSNYSTRLGFGGFGEVYKGQF--PNGVKI--AVKVLNR--NLGRIAEEQFMAEVGTI 129
++ +++ +G G FG VY G +G KI AVK LNR ++G ++ QF+ E G I
Sbjct: 28 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTE-GII 84
Query: 130 GRTY-HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ + H N++ L G C + LV YM++G L ++ + + L + AK
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHV-TISGYKGTP 245
G+ +L ++ +H D+ N +LD F+ KVADFGLA+ + D+ V +G K
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
+ A E L T K DV+SFG++L+E++ R
Sbjct: 202 KWMALESLQTQ-KFTTKSDVWSFGVLLWELMTR 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 89 GGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF----C 144
G FG V+K Q N +AVK+ L Q E+ + H NL++
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-------- 196
+ + L+ + + GSL YL G I W +L +A ++GL YLHE+
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ I H D K +NVLL ++ + +ADFGLA + K G GT Y APE L G
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 257 YPITH----KCDVYSFGMVLFEIVGRRRNA 282
+ D+Y+ G+VL+E+V R + A
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 214
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 215 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 257
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 86 LGFGGFGEV----YKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V Y + N G ++AVK L G E+ + YH N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 141 YGFCHDQ--HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C + + L+ E++ +GSL YL K I ++ + A+ KG+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPE-FLSGN 256
+ +H D+ NVL+++ K+ DFGL K + +K T+ + +P + APE +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 257 YPITHKCDVYSFGMVLFEIV 276
+ I DV+SFG+ L E++
Sbjct: 194 FYIAS--DVWSFGVTLHELL 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 175 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 230
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 231 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 273
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 274 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHI 135
Y ++LG G FG V ++ G +AVK L + G + F E+ + +
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 71
Query: 136 NLVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+V+ G + + LV EY+ +G L +L + ++ +L + KG+ YL
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEF 252
+R +H D+ N+L+++ K+ADFGLAKL +K + + +P + APE
Sbjct: 132 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 253 LSGNYPITHKCDVYSFGMVLFEI 275
LS N + + DV+SFG+VL+E+
Sbjct: 189 LSDNI-FSRQSDVWSFGVVLYEL 210
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 165 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 220
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 221 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 263
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 264 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 228
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 229 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 271
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 63 GREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRI 117
G + P F L Y ++LG G FG V ++ G +AVK L + G
Sbjct: 1 GPQDPTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPD 54
Query: 118 AEEQFMAEVGTIGRTYHINLVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEW 175
+ F E+ + + +V+ G + + LV EY+ +G L +L + ++
Sbjct: 55 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA 114
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTH 235
+L + KG+ YL +R +H D+ N+L+++ K+ADFGLAKL +K +
Sbjct: 115 SRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 236 VTISGYKGTPGY-SAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +P + APE LS N + + DV+SFG+VL+E+
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNI-FSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHI 135
Y ++LG G FG V ++ G +AVK L + G + F E+ + +
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 84
Query: 136 NLVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+V+ G + + LV EY+ +G L +L + ++ +L + KG+ YL
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEF 252
+R +H D+ N+L+++ K+ADFGLAKL +K + + +P + APE
Sbjct: 145 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 253 LSGNYPITHKCDVYSFGMVLFEI 275
LS N + + DV+SFG+VL+E+
Sbjct: 202 LSDNI-FSRQSDVWSFGVVLYEL 223
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 213
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 214 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 256
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 159 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR-ASYYRKGGCAMLPVKWMP 214
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 215 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 257
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 78
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G + L K + ++ A L Y H +R+
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 189
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 78
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G + L K + ++ A L Y H +R+
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRMH-D 189
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNR-NLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+LG G +GEV + V+ A+K++ + ++ + + + EV + H N+++LY
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
F D+ LV E + G L + + + E + I G+ YLH + I+H
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA-AVIIKQVLSGVTYLH---KHNIVH 159
Query: 203 YDIKPENVLLDANFSP---KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+LL++ K+ DFGL+ + + K + GT Y APE L Y
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRKKYD- 215
Query: 260 THKCDVYSFGMVLF 273
KCDV+S G++LF
Sbjct: 216 -EKCDVWSIGVILF 228
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 228
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 229 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 271
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 158 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 213
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 214 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 256
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 150 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 205
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 206 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 248
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 249 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 90
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 146
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 201
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 202 EKVDLWSLGVLCYEFLVGK 220
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTP-GYSA 249
E IH DI N LL +VA DFG+A+ R ++ G P +
Sbjct: 173 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-ASYYRKGGCAMLPVKWMP 228
Query: 250 PE-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGA 308
PE F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 229 PEAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLE 271
Query: 309 MILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 99
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRM-HD 210
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 211 EKVDLWSLGVLCYEFLVGK 229
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 74
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMH-D 185
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 186 EKVDLWSLGVLCYEFLVGK 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 78
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 189
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTPGYSAP 250
E IH DI N LL +VA DFG+A+ R + + P
Sbjct: 199 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 251 E-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAM 309
E F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 256 EAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEF 298
Query: 310 ILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 299 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 75
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH-D 186
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 187 EKVDLWSLGVLCYEFLVGK 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 74
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH-D 185
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 186 EKVDLWSLGVLCYEFLVGK 204
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHI 135
Y ++LG G FG V ++ G +AVK L + G + F E+ + +
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSD 68
Query: 136 NLVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+V+ G + + LV EY+ +G L +L + ++ +L + KG+ YL
Sbjct: 69 FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEF 252
+R +H D+ N+L+++ K+ADFGLAKL +K + +P + APE
Sbjct: 129 S---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 253 LSGNYPITHKCDVYSFGMVLFEI 275
LS N + + DV+SFG+VL+E+
Sbjct: 186 LSDNI-FSRQSDVWSFGVVLYEL 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FGEVY+GQ P+ +++AVK L E F+ E I + H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF------GKKRAIEWEKLHEIAIGTAKGLVYLH 193
G ++ E M G L +L + ++ L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVA---DFGLAKLCDRNKTHVTISGYKGTPGYSAP 250
E IH DI N LL +VA DFG+A+ R + + P
Sbjct: 176 E---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 251 E-FLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAM 309
E F+ G + T K D +SFG++L+EI SL + P + E+
Sbjct: 233 EAFMEGIF--TSKTDTWSFGVLLWEIF------------SLGYMP---YPSKSNQEVLEF 275
Query: 310 ILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+ G + K + + C Q PEDRP + +++ +E
Sbjct: 276 VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 78
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH-D 189
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 72
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 128
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 183
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 184 EKVDLWSLGVLCYEFLVGK 202
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 99
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEGRM-HD 210
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 211 EKVDLWSLGVLCYEFLVGK 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 86 LGFGGFGEVYKGQF---PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG V +G + + +A+KVL + + E+ M E + + + +VRL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + + LV E G L +L GK+ I + E+ + G+ YL E + +H
Sbjct: 404 VCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVH 459
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTI-SGYKGTPGYSAPEFLSGNYPITH 261
++ NVLL K++DFGL+K + ++ T S K + APE ++ +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR-KFSS 518
Query: 262 KCDVYSFGMVLFEIV 276
+ DV+S+G+ ++E +
Sbjct: 519 RSDVWSYGVTMWEAL 533
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIA--EEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG VY + N I A+KVL + A E Q EV H N++RLYG
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ HD L+ EY G++ L K + ++ A L Y H +++IH
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKKVIH 131
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHK 262
DIKPEN+LL + K+ADFG + ++ + GT Y PE + G K
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMH-DEK 186
Query: 263 CDVYSFGMVLFE-IVGR 278
D++S G++ +E +VG+
Sbjct: 187 VDLWSLGVLCYEFLVGK 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 242
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P+ RP ++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 195
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 196 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 239
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P+ RP ++ +L+
Sbjct: 240 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ------FMAEVGTIGRTYHINLV 138
++G G +G VYK Q G A+K + R+ +E + E+ + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+LY H + LV+E+++ L L + +E + G+ Y H+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSG 255
R++H D+KP+N+L++ K+ADFGLA+ + R TH ++ + Y AP+ L G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMG 174
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + D++S G + E+V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 77
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 133
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 188
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 189 EKVDLWSLGVLCYEFLVGK 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ------FMAEVGTIGRTYHINLV 138
++G G +G VYK Q G A+K + R+ +E + E+ + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+LY H + LV+E+++ L L + +E + G+ Y H+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSG 255
R++H D+KP+N+L++ K+ADFGLA+ + R TH ++ + Y AP+ L G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW-----YRAPDVLMG 174
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + D++S G + E+V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 78
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEXIEGRXH-D 189
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 190 EKVDLWSLGVLCYEFLVGK 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 242
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P RP ++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ------FMAEVGTIGRTYHINLV 138
++G G +G VYK Q G A+K + R+ +E + E+ + H N+V
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+LY H + LV+E+++ L L + +E + G+ Y H+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---R 119
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSG 255
R++H D+KP+N+L++ K+ADFGLA+ + R TH ++ + Y AP+ L G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW-----YRAPDVLMG 174
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + D++S G + E+V
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH-D 184
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 185 EKVDLWSLGVLCYEFLVGK 203
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 84 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 139
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 197
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 198 THQSDVWSYGVTVWELM 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 78 FTSNYSTRLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+T + + LG G FG+V+K + G+K+A K++ + G +E+ E+ + + H N
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKDKEEVKNEISVMNQLDHAN 147
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
L++LY ++ LV EY++ G L + + + +G+ ++H
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH--- 204
Query: 197 QQRIIHYDIKPENVLL---DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
Q I+H D+KPEN+L DA K+ DFGLA+ R K + GTP + APE +
Sbjct: 205 QMYILHLDLKPENILCVNRDAK-QIKIIDFGLAR---RYKPREKLKVNFGTPEFLAPEVV 260
Query: 254 SGNYPITHKCDVYSFGMVLFEIVG 277
+ ++ ++ D++S G++ + ++
Sbjct: 261 NYDF-VSFPTDMWSVGVIAYMLLS 283
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 93 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 148
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 206
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 207 THQSDVWSYGVTVWELM 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 84 LGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 139
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 197
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 198 THQSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 85 RLGFGGFGEVYKGQFPNGVK--IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
R+G G FGEVYKG N K +A+K+++ E E+ + + + R +G
Sbjct: 26 RIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
++ EY+ GS L K +E + I KGL YLH E R IH
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE---RKIH 139
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
DIK NVLL K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVIKQS-AYDF 195
Query: 262 KCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKH 296
K D++S G+ E+ G N+ + L PK+
Sbjct: 196 KADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 231
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 87 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 142
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 200
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 201 THQSDVWSYGVTVWELM 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 85 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 198
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 199 THQSDVWSYGVTVWELM 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
+G G FG+V G + G K+AVK + + + F+AE + + H NLV+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAI-EWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ +V EYM GSL YL + R++ + L + ++ + + YL +H
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 132
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKC 263
D+ NVL+ + KV+DFGL K + T K ++APE L + K
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR-EAAFSTKS 186
Query: 264 DVYSFGMVLFEI 275
DV+SFG++L+EI
Sbjct: 187 DVWSFGILLWEI 198
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
+G G FG+V G + G K+AVK + + + F+AE + + H NLV+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAI-EWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ +V EYM GSL YL + R++ + L + ++ + + YL +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 126
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKC 263
D+ NVL+ + KV+DFGL K + T K ++APE L + K
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR-EKKFSTKS 180
Query: 264 DVYSFGMVLFEI 275
DV+SFG++L+EI
Sbjct: 181 DVWSFGILLWEI 192
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 86 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 141
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 199
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 200 THQSDVWSYGVTVWELM 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 86 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 141
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 199
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 200 THQSDVWSYGVTVWELM 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 70
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 126
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ + GT Y PE + G
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH-D 181
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 182 EKVDLWSLGVLCYEFLVGK 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 85 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 198
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 199 THQSDVWSYGVTVWELM 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 77 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 190
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 191 THQSDVWSYGVTVWELM 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF- 143
++G G +GEV+ G++ G K+AVKV EE I +T + + GF
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFF-----TTEEASWFRETEIYQTVLMRHENILGFI 97
Query: 144 CHDQHMTA------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC- 196
D T L+ +Y ENGSL YL K ++ + + ++A + GL +LH E
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 197 ----QQRIIHYDIKPENVLLDANFSPKVADFGLAK--LCDRNKTHVTISGYKGTPGYSAP 250
+ I H D+K +N+L+ N + +AD GLA + D N+ + + GT Y P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 251 EFLSGNYPITH-----KCDVYSFGMVLFEIVGR 278
E L + H D+YSFG++L+E+ R
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG GGFG V++ + + A+K + +A E+ M EV + + H +VR +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 145 HDQHMT-------ALVYEYME-----NGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGL 189
+++ T VY Y++ +L ++ G+ E E+ LH I + A+ +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH-IFLQIAEAV 131
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTI----------S 239
+LH + ++H D+KP N+ + KV DFGL D+++ T+ +
Sbjct: 132 EFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 240 GYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
G GT Y +PE + GN +HK D++S G++LFE++
Sbjct: 189 GQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLILFELL 224
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+ADFG + ++ GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLCGTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 86 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 141
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 199
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 200 THQSDVWSYGVTVWELM 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
LG G FG+VYK + +A + E ++ E+ + H +V+L G +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
HD + ++ E+ G++D + R + ++ + + L +LH +RIIH D
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 142
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPIT 260
+K NVL+ ++ADFG++ KT + GTP + APE + + P
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 261 HKCDVYSFGMVLFEI 275
+K D++S G+ L E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
+G G FG+V G + G K+AVK + + + F+AE + + H NLV+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAI-EWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ +V EYM GSL YL + R++ + L + ++ + + YL +H
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 141
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKC 263
D+ NVL+ + KV+DFGL K + T K ++APE L + K
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR-EKKFSTKS 195
Query: 264 DVYSFGMVLFEI 275
DV+SFG++L+EI
Sbjct: 196 DVWSFGILLWEI 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
+G G FG+V G + G K+AVK + + + F+AE + + H NLV+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAI-EWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ +V EYM GSL YL + R++ + L + ++ + + YL +H
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 313
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKC 263
D+ NVL+ + KV+DFGL K + T K ++APE L + K
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALR-EKKFSTKS 367
Query: 264 DVYSFGMVLFEI 275
DV+SFG++L+EI
Sbjct: 368 DVWSFGILLWEI 379
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 86 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 141
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 199
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 200 THQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 90 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 145
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 203
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 204 THQSDVWSYGVTVWELM 220
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 75
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+A+FG + ++ GT Y PE + G
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 186
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 187 EKVDLWSLGVLCYEFLVGK 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 89 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 144
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 202
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 203 THQSDVWSYGVTVWELM 219
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKVLNRNL-------GRIAEEQFMAEVGTIGRTYHINL 137
LG G FG V+ + NG A+KVL + + +E+ M + T H +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-----HPFI 68
Query: 138 VRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE-WEKLHEIAIGTAKGLVYLHEEC 196
+R++G D ++ +Y+E G L L +R K + + A L YLH
Sbjct: 69 IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--LEYLH--- 123
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ II+ D+KPEN+LLD N K+ DFG AK + GTP Y APE +S
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTK 178
Query: 257 YPITHKCDVYSFGMVLFEIVG 277
P D +SFG++++E++
Sbjct: 179 -PYNKSIDWWSFGILIYEMLA 198
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-FC 144
LG G FG+VYK + +A + E ++ E+ + H +V+L G +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
HD + ++ E+ G++D + R + ++ + + L +LH +RIIH D
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 134
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNYPIT 260
+K NVL+ ++ADFG++ KT + GTP + APE + + P
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 261 HKCDVYSFGMVLFEI 275
+K D++S G+ L E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAV-KVLNRNLGRIAEEQFM-AEVGTIGRTYHINLVRLYGF 143
+G G +G K + + KI V K L+ AE+Q + +EV + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 144 CHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-- 199
D+ T L V EY E G L + + ++ E + L +EC +R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 200 ----IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
++H D+KP NV LD + K+ DFGLA++ + + + + GTP Y +PE ++
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSPEQMN- 189
Query: 256 NYPITHKCDVYSFGMVLFEIVG 277
K D++S G +L+E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCA 211
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 108 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 163
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+ NVL+ K+ DFGLAKL + G K + A E + T
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 222
Query: 261 HKCDVYSFGMVLFEIV 276
H+ DV+S+G+ ++E++
Sbjct: 223 HQSDVWSYGVTVWELM 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 242
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P+ RP ++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + + +AVKVL +L R +F E H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+++ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV-------GRRRNAIVGATESLDWFPKHVWEEYEKCE 305
G+ + + DVYS G VL+E++ G +++ D P E +
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSAD 249
Query: 306 LGAMIL 311
L A++L
Sbjct: 250 LDAVVL 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLLPVRW 198
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 242
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P+ RP ++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY + +F +K+ K G E Q EV H N++RL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG--VEHQLRREVEIQSHLRHPNILRL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
YG+ HD L+ EY G++ L K + ++ A L Y H +R+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH DIKPEN+LL + K+A+FG + ++ GT Y PE + G
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMH-D 187
Query: 261 HKCDVYSFGMVLFE-IVGR 278
K D++S G++ +E +VG+
Sbjct: 188 EKVDLWSLGVLCYEFLVGK 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + + +AVKVL +L R +F E H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+L+ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 134 ---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV 276
G+ + + DVYS G VL+E++
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVL 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 86 LGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V + G +AVK L G + E+ + YH ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 141 YGFCHDQ--HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C DQ LV EY+ GSL YL + + +L A +G+ YLH Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 130
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGNY 257
IH + NVLLD + K+ DFGLAK + + +P + APE L
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK-EC 189
Query: 258 PITHKCDVYSFGMVLFEIV 276
+ DV+SFG+ L+E++
Sbjct: 190 KFYYASDVWSFGVTLYELL 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 76
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 194 TES-KFSVASDVWSFGVVLYEL 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKV----LNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G K+ + V L A ++ + E + + ++ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 117 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 172
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 230
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 231 THQSDVWSYGVTVWELM 247
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 86 LGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG+V + G +AVK L G + E+ + YH ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 141 YGFCHDQ--HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
G C DQ LV EY+ GSL YL + + +L A +G+ YLH Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 131
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGNY 257
IH + NVLLD + K+ DFGLAK + + +P + APE L
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK-EC 190
Query: 258 PITHKCDVYSFGMVLFEIV 276
+ DV+SFG+ L+E++
Sbjct: 191 KFYYASDVWSFGVTLYELL 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 71
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 189 TES-KFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 70
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 188 TES-KFSVASDVWSFGVVLYEL 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 75
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 193 TES-KFSVASDVWSFGVVLYEL 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAV-KVLNRNLGRIAEEQFM-AEVGTIGRTYHINLVRLYGF 143
+G G +G K + + KI V K L+ AE+Q + +EV + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 144 CHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-- 199
D+ T L V EY E G L + + ++ E + L +EC +R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 200 ----IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
++H D+KP NV LD + K+ DFGLA++ + + + + GTP Y +PE ++
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KTFVGTPYYMSPEQMN- 189
Query: 256 NYPITHKCDVYSFGMVLFEIVG 277
K D++S G +L+E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCA 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 72
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 190 TES-KFSVASDVWSFGVVLYEL 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 63 GREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRI 117
G P +F L + +LG G FG V ++ G +AVK L +
Sbjct: 1 GSRDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 55
Query: 118 AEEQFMAEVGTIGRTYHINLVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEW 175
+ F E+ + H N+V+ G C+ + L+ EY+ GSL YL K I+
Sbjct: 56 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 114
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTH 235
KL + KG+ YL +R IH ++ N+L++ K+ DFGL K+ ++K +
Sbjct: 115 IKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEY 171
Query: 236 VTISGYKGTPGY-SAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +P + APE L+ + + DV+SFG+VL+E+
Sbjct: 172 YKVKEPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYEL 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 78
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 196 TES-KFSVASDVWSFGVVLYEL 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 72
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 190 TES-KFSVASDVWSFGVVLYEL 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 77
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 195 TES-KFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 79
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 197 TES-KFSVASDVWSFGVVLYEL 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + + +AVKVL +L R +F E H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+++ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV 276
G+ + + DVYS G VL+E++
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVL 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 103
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 221 TES-KFSVASDVWSFGVVLYEL 241
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 15 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 74
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 135 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPV 189
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 190 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H D+ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 197
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 198 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 241
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P+ RP ++ +L+
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 72
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 190 TES-KFSVASDVWSFGVVLYEL 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 90
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 208 TES-KFSVASDVWSFGVVLYEL 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIA--EEQFMAEVGTIGRTYHINLVRLYG 142
LG G F VY+ + G+++A+K++++ A ++ EV + H +++ LY
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ D + LV E NG ++ YL + + + G++YLH I+H
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILH 135
Query: 203 YDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+ N+LL N + K+ADFGLA +L ++ H T+ GTP Y +PE + + H
Sbjct: 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRS---AH 189
Query: 262 --KCDVYSFGMVLFE-IVGR 278
+ DV+S G + + ++GR
Sbjct: 190 GLESDVWSLGCMFYTLLIGR 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + A+G+ YL + +R+
Sbjct: 80 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED---RRL 135
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 193
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 194 THQSDVWSYGVTVWELM 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G GGF +V G +A+K++++N + E+ + H ++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
+ +V EY G L Y+ + R E E+ + + Y+H Q H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSE-EETRVVFRQIVSAVAYVHS---QGYAHRD 133
Query: 205 IKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCD 264
+KPEN+L D K+ DFGL NK + + G+ Y+APE + G + + D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELIQGKSYLGSEAD 192
Query: 265 VYSFGMVLFEIV 276
V+S G++L+ ++
Sbjct: 193 VWSMGILLYVLM 204
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 90
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL K I+ KL + KG+ YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 208 TES-KFSVASDVWSFGVVLYEL 228
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 144 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPV 198
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 199 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 53/314 (16%)
Query: 67 PVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKI--AVKVLNRNLGRIAEEQFM 123
P + L N+ + +G G FG+V K + +G+++ A+K + + F
Sbjct: 6 PTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 63
Query: 124 AEVGTIGRT-YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
E+ + + +H N++ L G C + L EY +G+L +L K R +E + IA
Sbjct: 64 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIA 122
Query: 183 IGTA----------------KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLA 226
TA +G+ YL Q++ IH D+ N+L+ N+ K+ADFGL+
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 179
Query: 227 KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI-THKCDVYSFGMVLFEIVGRRRNAIVG 285
+ V + G S NY + T DV+S+G++L+EIV G
Sbjct: 180 R-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
Query: 286 ATESLDWFPKHVWEEYEKCELGAMI---LGCGIEEKDKEKAKRLCMVALWCVQDSPEDRP 342
T + E YEK G + L C E D + C ++ P +RP
Sbjct: 235 MTCA---------ELYEKLPQGYRLEKPLNCDDEVYDLMRQ---------CWREKPYERP 276
Query: 343 PMSAVIKMLEGVVE 356
+ ++ L ++E
Sbjct: 277 SFAQILVSLNRMLE 290
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAV-KVLNRNLGRIAEEQFM-AEVGTIGRTYHINLVRLYGF 143
+G G +G K + + KI V K L+ AE+Q + +EV + H N+VR Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 144 CHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-- 199
D+ T L V EY E G L + + ++ E + L +EC +R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 200 ----IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
++H D+KP NV LD + K+ DFGLA++ + ++ + GTP Y +PE ++
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMN- 189
Query: 256 NYPITHKCDVYSFGMVLFEIVG 277
K D++S G +L+E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCA 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V K +AVK+L N ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYL-----------------------FGKKRAIEWE 176
LYG C L+ EY + GSL G+L +RA+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A ++G+ YL E +++H D+ N+L+ K++DFGL++ ++V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG-ATESLDWFPK 295
S + + A E L ++ T + DV+SFG++L+EIV N G E L K
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 296 --HVWEEYEKC--ELGAMILGCGIEEKDK 320
H E + C E+ ++L C +E DK
Sbjct: 267 TGHRMERPDNCSEEMYRLMLQCWKQEPDK 295
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 87 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 142
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFG AKL + G K + A E L Y
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 200
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 201 THQSDVWSYGVTVWELM 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
L G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 136/336 (40%), Gaps = 58/336 (17%)
Query: 54 TMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPN------GVKIAV 107
M+ F+Q I R V LG G FG+V+ + N + +AV
Sbjct: 2 AMDTFVQHIKRHNIV-------------LKRELGEGAFGKVFLAECYNLCPEQDKILVAV 48
Query: 108 KVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL- 166
K L ++ A + F E + H ++V+ YG C + +V+EYM++G L+ +L
Sbjct: 49 KTL-KDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLR 107
Query: 167 -FGKKRAIEWE----------KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDAN 215
G + E ++ IA A G+VYL Q +H D+ N L+ N
Sbjct: 108 AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGEN 164
Query: 216 FSPKVADFGLAKLCDRNKT-HVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFE 274
K+ DFG+++ D T + + G+ P P T + DV+S G+VL+E
Sbjct: 165 LLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 275 IVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEKAKRLCMVALWCV 334
I + K W + E+ I + ++ + + + + L C
Sbjct: 223 IFT---------------YGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCW 267
Query: 335 QDSPEDRPPMSAVIKMLEGVVEVLPPPKPFRYLDLI 370
Q P R + + +L+ + + P YLD++
Sbjct: 268 QREPHMRKNIKGIHTLLQNLAKASPV-----YLDIL 298
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
L G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 90 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 145
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 203
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 204 THQSDVWSYGVTVWELM 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 35/225 (15%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
+G G +GEV++G + +G +AVK+ + +EQ I T + + GF
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSR-----DEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 146 DQHMTA--------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC- 196
MT+ L+ Y E+GSL Y F +++ +E +A+ A GL +LH E
Sbjct: 70 SD-MTSRNSSTQLWLITHYHEHGSL--YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 197 ----QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAP 250
+ I H D K NVL+ +N +AD GLA + + ++ I GT Y AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 251 EFLSGNYPITHKC-------DVYSFGMVLFEIVGRRRNAIVGATE 288
E L I C D+++FG+VL+EI RR + G E
Sbjct: 187 EVLDEQ--IRTDCFESYKWTDIWAFGLVLWEIA--RRTIVNGIVE 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 60 QEIGREKPVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLN-RNLG 115
Q++GR F F+ NY + LG G F V + G++ A K++N + L
Sbjct: 11 QQMGRGS--EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS 68
Query: 116 RIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEW 175
++ E + H N+VRL+ ++ LV++ + G L + ++ E
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANF---SPKVADFGLA-KLCDR 231
+ H I + + Y H I+H ++KPEN+LL + + K+ADFGLA ++ D
Sbjct: 129 DASHCIQ-QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Query: 232 NKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
H G+ GTPGY +PE L + P + D+++ G++L+
Sbjct: 185 EAWH----GFAGTPGYLSPEVLKKD-PYSKPVDIWACGVILY 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 76 NNFTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLN-RNLGRIAEEQFMAEVGTIGR 131
F+ NY + LG G F V + G++ A K++N + L ++ E +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
H N+VRL+ ++ LV++ + G L + ++ E + H I + + Y
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAY 120
Query: 192 LHEECQQRIIHYDIKPENVLLDANF---SPKVADFGLA-KLCDRNKTHVTISGYKGTPGY 247
H I+H ++KPEN+LL + + K+ADFGLA ++ D H G+ GTPGY
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGY 173
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLF 273
+PE L + P + D+++ G++L+
Sbjct: 174 LSPEVLKKD-PYSKPVDIWACGVILY 198
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 53/314 (16%)
Query: 67 PVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKI--AVKVLNRNLGRIAEEQFM 123
P + L N+ + +G G FG+V K + +G+++ A+K + + F
Sbjct: 16 PTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73
Query: 124 AEVGTIGRT-YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
E+ + + +H N++ L G C + L EY +G+L +L K R +E + IA
Sbjct: 74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIA 132
Query: 183 IGTA----------------KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLA 226
TA +G+ YL Q++ IH D+ N+L+ N+ K+ADFGL+
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 189
Query: 227 KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI-THKCDVYSFGMVLFEIVGRRRNAIVG 285
+ V + G S NY + T DV+S+G++L+EIV G
Sbjct: 190 R-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
Query: 286 ATESLDWFPKHVWEEYEKCELGAMI---LGCGIEEKDKEKAKRLCMVALWCVQDSPEDRP 342
T + E YEK G + L C E D + C ++ P +RP
Sbjct: 245 MTCA---------ELYEKLPQGYRLEKPLNCDDEVYDLMRQ---------CWREKPYERP 286
Query: 343 PMSAVIKMLEGVVE 356
+ ++ L ++E
Sbjct: 287 SFAQILVSLNRMLE 300
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 76 NNFTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLN-RNLGRIAEEQFMAEVGTIGR 131
F+ NY + LG G F V + G++ A K++N + L ++ E +
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
H N+VRL+ ++ LV++ + G L + ++ E + H I + + Y
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAY 119
Query: 192 LHEECQQRIIHYDIKPENVLLDANF---SPKVADFGLA-KLCDRNKTHVTISGYKGTPGY 247
H I+H ++KPEN+LL + + K+ADFGLA ++ D H G+ GTPGY
Sbjct: 120 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGY 172
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLF 273
+PE L + P + D+++ G++L+
Sbjct: 173 LSPEVLKKD-PYSKPVDIWACGVILY 197
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
L G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 90 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 145
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFGLAKL + G K + A E L Y
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 203
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 204 THQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 85 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
+H D+ NVL+ K+ DFG AKL + G K + A E + T
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 261 HKCDVYSFGMVLFEIV 276
H+ DV+S+G+ ++E++
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 39/210 (18%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVL-------NRNLGRIAEEQFMAEVGTIGRTYHIN 136
+LG GG VY + +K+A+K + L R F EV + H N
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-----FEREVHNSSQLSHQN 72
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA--------KG 188
+V + + LV EY+E +L Y+ E +++ TA G
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---------ESHGPLSVDTAINFTNQILDG 123
Query: 189 LVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-GTPGY 247
+ + H+ RI+H DIKP+N+L+D+N + K+ DFG+AK ++T +T + + GT Y
Sbjct: 124 IKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQY 178
Query: 248 SAPEFLSGNYPITHKC-DVYSFGMVLFEIV 276
+PE G T +C D+YS G+VL+E++
Sbjct: 179 FSPEQAKGEA--TDECTDIYSIGIVLYEML 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRLY 141
+LG G +GEV + G + A+K++ ++ + EV + + H N+++LY
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
F D+ LV E G L + +++ E + I G YLH + I+
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-AVIMKQVLSGTTYLH---KHNIV 126
Query: 202 HYDIKPENVLLDANFSP---KVADFGLAKLCDRNKTHVTISGYK----GTPGYSAPEFLS 254
H D+KPEN+LL++ K+ DFGL+ H + G GT Y APE L
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPEVLR 179
Query: 255 GNYPITHKCDVYSFGMVLF 273
Y KCDV+S G++L+
Sbjct: 180 KKYD--EKCDVWSCGVILY 196
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 85 LGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFG AKL + G K + A E L Y
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 198
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 199 THQSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 85 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 140
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFG AKL + G K + A E L Y
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 198
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 199 THQSDVWSYGVTVWELM 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 83 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 138
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFG AKL + G K + A E L Y
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 196
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 197 THQSDVWSYGVTVWELM 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 78 FTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLN-RNLGRIAEEQFMAEVGTIGRTY 133
F+ NY + LG G F V + G++ A K++N + L ++ E +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+VRL+ ++ LV++ + G L + ++ E + H I + + Y H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCH 122
Query: 194 EECQQRIIHYDIKPENVLLDANF---SPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSA 249
I+H ++KPEN+LL + + K+ADFGLA ++ D H G+ GTPGY +
Sbjct: 123 ---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGTPGYLS 175
Query: 250 PEFLSGNYPITHKCDVYSFGMVLF 273
PE L + P + D+++ G++L+
Sbjct: 176 PEVLKKD-PYSKPVDIWACGVILY 198
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 188
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
RLG GGFG V + + G ++A+K + L E++ E+ + + H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 144 CHDQHMTA------LVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
A L EY E G L YL F ++ + + + L YLHE
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 196 CQQRIIHYDIKPENVLLD---ANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF 252
RIIH D+KPEN++L K+ D G AK D+ + + + GT Y APE
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 195
Query: 253 L-SGNYPITHKCDVYSFGMVLFEIV 276
L Y +T D +SFG + FE +
Sbjct: 196 LEQKKYTVT--VDYWSFGTLAFECI 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 191
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 193
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 85 RLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
RLG GGFG V + + G ++A+K + L E++ E+ + + H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 144 CHDQHMTA------LVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
A L EY E G L YL F ++ + + + L YLHE
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 139
Query: 196 CQQRIIHYDIKPENVLLD---ANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF 252
RIIH D+KPEN++L K+ D G AK D+ + + + GT Y APE
Sbjct: 140 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPEL 194
Query: 253 L-SGNYPITHKCDVYSFGMVLFEIV 276
L Y +T D +SFG + FE +
Sbjct: 195 LEQKKYTVT--VDYWSFGTLAFECI 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 82 YSTRLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
+ +LG G FG V ++ G +AVK L + + F E+ + H N
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDN 75
Query: 137 LVRLYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
+V+ G C+ + L+ EY+ GSL YL I+ KL + KG+ YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFL 253
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 254 SGNYPITHKCDVYSFGMVLFEI 275
+ + + DV+SFG+VL+E+
Sbjct: 193 TES-KFSVASDVWSFGVVLYEL 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQF-PNG----VKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VYKG + P G + +A+K L A ++ + E + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
G C L+ + M G L Y+ K I + L + AKG+ YL + +R+
Sbjct: 90 LGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRL 145
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPI 259
+H D+ NVL+ K+ DFG AKL + G K + A E L Y
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY-- 203
Query: 260 THKCDVYSFGMVLFEIV 276
TH+ DV+S+G+ ++E++
Sbjct: 204 THQSDVWSYGVTVWELM 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 191
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 194
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 235
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 85 RLGFGGFGEVY--KGQFPNGVKIAVKVLNRNLGRIAEEQ--FMAEVGTIGRTYHINLVRL 140
+LG G +GEV K + G + A+K++ ++ + EV + + H N+++L
Sbjct: 28 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y F D+ LV E G L + +++ E + I G YLH + I
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-AVIMKQVLSGTTYLH---KHNI 142
Query: 201 IHYDIKPENVLLDANFSP---KVADFGLAKLCDRNKTHVTISGYK----GTPGYSAPEFL 253
+H D+KPEN+LL++ K+ DFGL+ H + G GT Y APE L
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPEVL 195
Query: 254 SGNYPITHKCDVYSFGMVLF 273
Y KCDV+S G++L+
Sbjct: 196 RKKY--DEKCDVWSCGVILY 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V K +AVK+L N ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYL-----------------------FGKKRAIEWE 176
LYG C L+ EY + GSL G+L +RA+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A ++G+ YL E +++H D+ N+L+ K++DFGL++ + V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG-ATESLDWFPK 295
S + + A E L ++ T + DV+SFG++L+EIV N G E L K
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 296 --HVWEEYEKC--ELGAMILGCGIEEKDK 320
H E + C E+ ++L C +E DK
Sbjct: 267 TGHRMERPDNCSEEMYRLMLQCWKQEPDK 295
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H ++ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 199 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 242
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P RP ++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 196
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTI-GRTYHINLV 138
LG G FG VY+G + +K +AVK +N + +F+ E + G T H ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAKGL 189
RL G T +V E M +G L YL + E +++ ++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGY 247
YL+ ++ +H ++ N ++ +F+ K+ DFG+ + D +T G KG +
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELG 307
APE L T D++SFG+VL+EI G + ++
Sbjct: 200 MAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---------------QVL 243
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
++ G ++ +R+ + C Q +P RP ++ +L+
Sbjct: 244 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 106 GVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 219
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 260
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + +AVKVL +L R +F E H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+++ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV 276
G+ + + DVYS G VL+E++
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVL 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 85 RLGFGGFGEVYKGQFP-----NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
+LG G FG V ++ G +AVK L + + F E+ + H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-FEREIEILKSLQHDNIVK 78
Query: 140 LYGFCHD--QHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
G C+ + L+ E++ GSL YL K I+ KL + KG+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY-SAPEFLSGN 256
+R IH D+ N+L++ K+ DFGL K+ ++K + +P + APE L+ +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 257 YPITHKCDVYSFGMVLFEI 275
+ DV+SFG+VL+E+
Sbjct: 196 -KFSVASDVWSFGVVLYEL 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 26/263 (9%)
Query: 100 PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMEN 159
P K+A+K +N + + ++ + E+ + + +H N+V Y + LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 160 GSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLL 212
GS+ + K ++ + I +GL YLH+ Q IH D+K N+LL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 213 DANFSPKVADFGLAKL------CDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVY 266
+ S ++ADFG++ RNK T + GTP + APE + K D++
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKT---FVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 267 SFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEKAKRL 326
SFG+ E+ GA + P V + + ++ G +E K+ K
Sbjct: 212 SFGITAIELA-------TGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF 264
Query: 327 CMVALWCVQDSPEDRPPMSAVIK 349
+ C+Q PE RP + +++
Sbjct: 265 RKMISLCLQKDPEKRPTAAELLR 287
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 101 NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHI--------NLVRLYGFCHDQHMTAL 152
G + AVK++ R++ EQ R HI +++ L L
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 153 VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLL 212
V++ M G L YL +K A+ ++ I + + +LH I+H D+KPEN+LL
Sbjct: 178 VFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILL 233
Query: 213 DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH-----KCDVYS 267
D N +++DFG + + + + GTPGY APE L + TH + D+++
Sbjct: 234 DDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290
Query: 268 FGMVLFEIVG 277
G++LF ++
Sbjct: 291 CGVILFTLLA 300
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
N+V L G C ++ EY G L +L K R +E + IA TA LH
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 195 ECQ----------QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
Q + IH D+ NVLL K+ DFGLA+ + ++ +
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ APE + + T + DV+S+G++L+EI N G
Sbjct: 230 VKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 20 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAI---------EWEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + A+ K+ ++A A
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 140 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 194
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 195 RWMSPESLKDGVFTTYS-DVWSFGVVLWEI 223
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAI---------EWEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + A+ K+ ++A A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TP 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 150 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 204
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 205 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE 119
E+ +E+P L++ +F + LG G FG+V+ +F + A+K L +++ + +
Sbjct: 2 ELNKERPSLQIKLKIEDFILH--KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD 59
Query: 120 --EQFMAEVGTIGRTY-HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE 176
E M E + + H L ++ + V EY+ G L Y +
Sbjct: 60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLS 118
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ A GL +LH + I++ D+K +N+LLD + K+ADFG+ K +
Sbjct: 119 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDA 173
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
+ + GTP Y APE L G H D +SFG++L+E++
Sbjct: 174 KTNXFCGTPDYIAPEILLGQ-KYNHSVDWWSFGVLLYEML 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 21 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 141 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 195
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 196 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 143 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 197
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 198 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 137 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 191
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 192 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 143 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 197
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 198 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 571
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TP 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 150 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 204
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 205 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 233
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ +N K+ DFGL++ + + T S K + APE ++ T
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRR-FTS 191
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 26/263 (9%)
Query: 100 PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMEN 159
P K+A+K +N + + ++ + E+ + + +H N+V Y + LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 160 GSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLL 212
GS+ + K ++ + I +GL YLH+ Q IH D+K N+LL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 213 DANFSPKVADFGLAKL------CDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVY 266
+ S ++ADFG++ RNK T + GTP + APE + K D++
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKT---FVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 267 SFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEEKDKEKAKRL 326
SFG+ E+ GA + P V + + ++ G +E K+ K
Sbjct: 207 SFGITAIELA-------TGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSF 259
Query: 327 CMVALWCVQDSPEDRPPMSAVIK 349
+ C+Q PE RP + +++
Sbjct: 260 RKMISLCLQKDPEKRPTAAELLR 282
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 13 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 123
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 184 AEPVDVWSCGIVLTAMLA 201
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 144 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 198
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 199 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + +AVKVL +L R +F E H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+++ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 134 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV 276
G+ + + DVYS G VL+E++
Sbjct: 191 ARGDS-VDARSDVYSLGCVLYEVL 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 15/221 (6%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE 119
E+ +E+P L++ +F + LG G FG+V+ +F + A+K L +++ + +
Sbjct: 3 ELNKERPSLQIKLKIEDFELH--KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD 60
Query: 120 --EQFMAEVGTIGRTY-HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE 176
E M E + + H L ++ + V EY+ G L Y +
Sbjct: 61 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQSCHKFDLS 119
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKT-H 235
+ A GL +LH + I++ D+K +N+LLD + K+ADFG +C N
Sbjct: 120 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFG---MCKENMLGD 173
Query: 236 VTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
+ + GTP Y APE L G H D +SFG++L+E++
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQ-KYNHSVDWWSFGVLLYEML 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 53/314 (16%)
Query: 67 PVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKI--AVKVLNRNLGRIAEEQFM 123
P + L N+ + +G G FG+V K + +G+++ A+K + + F
Sbjct: 13 PTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 70
Query: 124 AEVGTIGRT-YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
E+ + + +H N++ L G C + L EY +G+L +L K R +E + IA
Sbjct: 71 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIA 129
Query: 183 IGTA----------------KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLA 226
TA +G+ YL Q++ IH ++ N+L+ N+ K+ADFGL+
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Query: 227 KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI-THKCDVYSFGMVLFEIVGRRRNAIVG 285
+ V + G S NY + T DV+S+G++L+EIV G
Sbjct: 187 R-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 241
Query: 286 ATESLDWFPKHVWEEYEKCELGAMI---LGCGIEEKDKEKAKRLCMVALWCVQDSPEDRP 342
T + E YEK G + L C E D + C ++ P +RP
Sbjct: 242 MTCA---------ELYEKLPQGYRLEKPLNCDDEVYDLMRQ---------CWREKPYERP 283
Query: 343 PMSAVIKMLEGVVE 356
+ ++ L ++E
Sbjct: 284 SFAQILVSLNRMLE 297
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 38/269 (14%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V K +AVK+L N ++E + + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYL-----------------------FGKKRAIEWE 176
LYG C L+ EY + GSL G+L +RA+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A ++G+ YL E ++H D+ N+L+ K++DFGL++ + V
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG-ATESLDWFPK 295
S + + A E L ++ T + DV+SFG++L+EIV N G E L K
Sbjct: 208 KRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 296 --HVWEEYEKC--ELGAMILGCGIEEKDK 320
H E + C E+ ++L C +E DK
Sbjct: 267 TGHRMERPDNCSEEMYRLMLQCWKQEPDK 295
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G + VYKG+ +A+K + A + EV + H N+V L+
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
H + LV+EY++ L YL I + +GL Y H +Q+++H
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKC 263
D+KP+N+L++ K+ADFGLA+ ++ T T Y P+ L G+ + +
Sbjct: 125 DLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 264 DVYSFGMVLFEIVGRR 279
D++ G + +E+ R
Sbjct: 183 DMWGVGCIFYEMATGR 198
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 145
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 146 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 205 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 262 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 298
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 125
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ D I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G +GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ A K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 191
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 232
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N ++ +F+ K+ DFG+ + D +T G KG
Sbjct: 172 GMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 226
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 227 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 255
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V K + V +AVK+L + ++E + M +G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--- 99
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 215 KTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N ++ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ------FMAEVGTIGRTYHINLVR 139
LG G F VYK + N +I V + LG +E + + E+ + H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 140 LY-GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
L F H +++ LV+++ME L+ + + + + T +GL YLH Q
Sbjct: 77 LLDAFGHKSNIS-LVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QH 131
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLC---DRNKTHVTISGYKGTPGYSAPEFLSG 255
I+H D+KP N+LLD N K+ADFGLAK +R H ++ + Y APE L G
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW-----YRAPELLFG 186
Query: 256 NYPITHKCDVYSFGMVLFEIVGR 278
D+++ G +L E++ R
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLR 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 91
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 92 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 208 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G FG+V++G + + + +A+K E+F+ E T+ + H ++V+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ ++ E G L +L +K +++ L A + L YL +R +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI NVL+ A K+ DFGL++ + + T+ S K + APE ++ T
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRR-FTS 571
Query: 262 KCDVYSFGMVLFEIV--------GRRRNAIVGATESLDWFP 294
DV+ FG+ ++EI+ G + N ++G E+ + P
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 88
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 89 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 205 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 86
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ EY G+L YL ++ + ++
Sbjct: 87 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 203 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 239
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 83 STRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN 136
S LG G FG VY+G VK +A+K +N +F+ E + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE---------WEKLHEIAIGTAK 187
+VRL G T ++ E M G L YL + +E K+ ++A A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT--P 245
G+ YL+ + +H D+ N + +F+ K+ DFG+ + D +T G KG
Sbjct: 137 GMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPV 191
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ +PE L T+ DV+SFG+VL+EI
Sbjct: 192 RWMSPESLKDGVFTTY-SDVWSFGVVLWEI 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R + E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 40/292 (13%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRL 140
LG G FG V +G +K+AVK + + E E+F++E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 141 YGFCHDQHMTAL-----VYEYMENGSLDGYLFGKK-----RAIEWEKLHEIAIGTAKGLV 190
G C + + + +M+ G L YL + + I + L + + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 191 YLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAP 250
YL + +H D+ N +L + + VADFGL+K + K + A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 251 EFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGAT--ESLDWFPK-HVWEEYEKCELG 307
E L+ T K DV++FG+ ++EI R G E D+ H ++ E C
Sbjct: 219 ESLADRV-YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDC--- 274
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLP 359
L + C + P DRP S + LE ++E LP
Sbjct: 275 ---------------LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAE--EQFMAEVGTIGRTYHINLVRLYG 142
LGFGG EV+ + +AVKVL +L R +F E H +V +Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 143 FCHDQH----MTALVYEYMENGSLDGYL-----FGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + +V EY++ +L + KRAIE + + L + H
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 150
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEF 252
Q IIH D+KP N+++ A + KV DFG+A+ + D + + GT Y +PE
Sbjct: 151 ---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 253 LSGNYPITHKCDVYSFGMVLFEIV 276
G+ + + DVYS G VL+E++
Sbjct: 208 ARGDS-VDARSDVYSLGCVLYEVL 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 77
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 78 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 193 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 230
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 84
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 85 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 200 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 85
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 86 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 201 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 92
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 208 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 81
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 82 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 197 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPAFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
N+V L G C ++ EY G L +L K R +E + IA T LH
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 195 ECQ----------QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
Q + IH D+ NVLL K+ DFGLA+ + ++ +
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ APE + + T + DV+S+G++L+EI N G
Sbjct: 230 VKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 86 LGFGGFGEVYKGQFPNGV---KIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G GEV N V +AVK+++ E E+ H N+V+ YG
Sbjct: 14 LGEGAAGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYL---FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ ++ L EY G L + G H++ G+VYLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH---GIG 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I H DIKPEN+LLD + K++DFGLA + N ++ GT Y APE L
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 260 THKCDVYSFGMVLFEIVG 277
DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 92
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 208 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 92
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 208 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 245
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 78 FTSNYST--RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTY 133
F N+ ++G G +G VYK + G +A+K + + + E+ +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V+L H ++ LV+E++ I + +GL + H
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAP 250
R++H D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y AP
Sbjct: 128 ---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 251 EFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
E L G + D++S G + E+V RR
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA---IGTAKGLVYLHEECQQR 199
H ++ LV+E++ S+D F A+ L I +GL + H R
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 126
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
++H D+KPEN+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 181
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGXKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R ++ E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLYG 142
LG GGFGEV+ Q K+ + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 143 FCHDQHMTALVYEYMENGSL---------DGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ LV M G + D F + RAI + GL +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY------TAQIVSGLEHLH 306
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
Q+ II+ D+KPENVLLD + + +++D GLA +T GY GTPG+ APE L
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELL 361
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRR 279
G D ++ G+ L+E++ R
Sbjct: 362 LGE-EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLYG 142
LG GGFGEV+ Q K+ + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 143 FCHDQHMTALVYEYMENGSL---------DGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ LV M G + D F + RAI + GL +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY------TAQIVSGLEHLH 306
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
Q+ II+ D+KPENVLLD + + +++D GLA +T GY GTPG+ APE L
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELL 361
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRR 279
G D ++ G+ L+E++ R
Sbjct: 362 LGE-EYDFSVDYFALGVTLYEMIAAR 386
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R ++ E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ Y G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G FGEV+KG K+ A+K+++ E E+ + + + + YG
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 144 CHDQHMTALVYEYMENGS-LDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYLHEECQ 197
++ EY+ GS LD +E L E I T KGL YLH E
Sbjct: 89 YLKDTKLWIIMEYLGGGSALD--------LLEPGPLDETQIATILREILKGLDYLHSE-- 138
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ IH DIK NVLL + K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVIKQS 194
Query: 257 YPITHKCDVYSFGMVLFEIV 276
K D++S G+ E+
Sbjct: 195 -AYDSKADIWSLGITAIELA 213
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLYG 142
LG GGFGEV+ Q K+ + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 143 FCHDQHMTALVYEYMENGSL---------DGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ LV M G + D F + RAI + GL +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY------TAQIVSGLEHLH 306
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
Q+ II+ D+KPENVLLD + + +++D GLA +T GY GTPG+ APE L
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELL 361
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRR 279
G D ++ G+ L+E++ R
Sbjct: 362 LGE-EYDFSVDYFALGVTLYEMIAAR 386
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R ++ E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA---IGTAKGLVYLHEECQQR 199
H ++ LV+E++ S+D F A+ L I +GL + H R
Sbjct: 71 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHR 124
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
++H D+KPEN+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGC 179
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLYG 142
LG GGFGEV+ Q K+ + + M E + + + +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 143 FCHDQHMTALVYEYMENGSL---------DGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ LV M G + D F + RAI + GL +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY------TAQIVSGLEHLH 306
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
Q+ II+ D+KPENVLLD + + +++D GLA +T GY GTPG+ APE L
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELL 361
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRR 279
G D ++ G+ L+E++ R
Sbjct: 362 LGE-EYDFSVDYFALGVTLYEMIAAR 386
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R ++ E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G FGEV+KG K+ A+K+++ E E+ + + + + YG
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 144 CHDQHMTALVYEYMENGS-LDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYLHEECQ 197
++ EY+ GS LD +E L E I T KGL YLH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALD--------LLEPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ IH DIK NVLL + K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAPEVIKQS 179
Query: 257 YPITHKCDVYSFGMVLFEIV 276
K D++S G+ E+
Sbjct: 180 -AYDSKADIWSLGITAIELA 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 78 FTSNYST--RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTY 133
F N+ ++G G +G VYK + G +A+K + + + E+ +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 67
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V+L H ++ LV+E++ I + +GL + H
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAP 250
R++H D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y AP
Sbjct: 128 ---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 251 EFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
E L G + D++S G + E+V RR
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 25/199 (12%)
Query: 84 TRLGFGGFGEVYK-----GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
+ LG G VY+ Q P +K+ K +++ + R E+G + R H N++
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR-------TEIGVLLRLSHPNII 111
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L +LV E + G L + K E + + + + YLHE
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-QILEAVAYLHE---N 167
Query: 199 RIIHYDIKPENVLLDANFSP----KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
I+H D+KPEN LL A +P K+ADFGL+K+ + T+ G TPGY APE L
Sbjct: 168 GIVHRDLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG---TPGYCAPEILR 223
Query: 255 GNYPITHKCDVYSFGMVLF 273
G + D++S G++ +
Sbjct: 224 GC-AYGPEVDMWSVGIITY 241
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G FGEV+KG K+ A+K+++ E E+ + + + + YG
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 144 CHDQHMTALVYEYMENGS-LDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYLHEECQ 197
++ EY+ GS LD +E L E I T KGL YLH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALD--------LLEPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ IH DIK NVLL + K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVIKQS 179
Query: 257 YPITHKCDVYSFGMVLFEIV 276
K D++S G+ E+
Sbjct: 180 -AYDSKADIWSLGITAIELA 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 180
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 92
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 208 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 245
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ D I + +GL + H R++H
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 184
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 130
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 185
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 182
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQFMAEVGTIGRTYHINLVR 139
LG G F V K + G++ A K + + R ++ E+ EV + + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L+ ++ L+ E + G L +L +K ++ E+ G+ YLH ++
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 200 IIHYDIKPENV-LLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
I H+D+KPEN+ LLD N K+ DFGLA + V GTP + APE +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIV-- 190
Query: 256 NY-PITHKCDVYSFGMVLF 273
NY P+ + D++S G++ +
Sbjct: 191 NYEPLGLEADMWSIGVITY 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 180
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 85 RLGFGGFGEVYKGQFPNGVK--IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
R+G G FGEV+KG N + +A+K+++ E E+ + + + + YG
Sbjct: 30 RIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYLHEECQ 197
++ EY+ GS L RA ++ E I T KGL YLH E
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL----RAGPFD---EFQIATMLKEILKGLDYLHSE-- 139
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ IH DIK NVLL K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAPEVIQQS 195
Query: 257 YPITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKH 296
K D++S G+ E+ G N+ + L PK+
Sbjct: 196 -AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN 235
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ D I + +GL + H R++H
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 183
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 86 LGFGGFGEVYKGQF-------PNGV-KIAVKVLNRNLGR------IAEEQFMAEVGTIGR 131
LG G FG+V + PN V K+AVK+L + I+E + M +G
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--- 133
Query: 132 TYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWE 176
H N++ L G C ++ EY G+L YL ++ + +
Sbjct: 134 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A A+G+ YL ++ IH D+ NVL+ + K+ADFGLA+ +
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++L+EI
Sbjct: 249 KTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEI 286
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 119
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 120 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 177 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 85 RLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
++G G +G VYK G+ KI + + A + E+ + H N+V
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IREISLLKELNHPNIV 65
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L H ++ LV+E++ I + +GL + H
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SH 122
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSG 255
R++H D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLG 177
Query: 256 NYPITHKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 85 RLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
++G G +G VYK G+ KI + + A + E+ + H N+V
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IREISLLKELNHPNIV 64
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
+L H ++ LV+E++ I + +GL + H
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SH 121
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSG 255
R++H D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLG 176
Query: 256 NYPITHKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 85 RLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G FGEV+KG K+ A+K+++ E E+ + + + + YG
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 144 CHDQHMTALVYEYMENGS-LDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYLHEECQ 197
++ EY+ GS LD +E L E I T KGL YLH E
Sbjct: 94 YLKDTKLWIIMEYLGGGSALD--------LLEPGPLDETQIATILREILKGLDYLHSE-- 143
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+ IH DIK NVLL + K+ADFG+A +L D T + + + GTP + APE + +
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNTFVGTPFWMAPEVIKQS 199
Query: 257 YPITHKCDVYSFGMVLFEIV 276
K D++S G+ E+
Sbjct: 200 -AYDSKADIWSLGITAIELA 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 86 LGFGGFGEVY--------KGQFPNGVKIAVKVLN-----RNLGRIAEEQFMAEVGTIGRT 132
LG G FG+V K + V +AVK+L ++L + E M ++ IG+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM--IGK- 99
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEK 177
H N++ L G C ++ Y G+L YL ++ + ++
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
L A+G+ YL Q+ IH D+ NVL+ N K+ADFGLA+ + +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 238 ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + + APE L TH+ DV+SFG++++EI
Sbjct: 216 TTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEI 252
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 119
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 120 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 177 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 29/208 (13%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 143 FCHDQHMTALVYE--------YMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
H ++ LV+E +M+ +L G ++ ++ L +GL + H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLL--------QGLAFCH- 119
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPE 251
R++H D+KP+N+L++ + K+ADFGLA+ + R TH ++ + Y APE
Sbjct: 120 --SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPE 172
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVGRR 279
L G + D++S G + E+V RR
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 183
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG+V K + + A+K + +++ ++EV + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLNHQYVVRYYAAW 71
Query: 145 HDQH-----MTA--------LVYEYMENGSLDGYL----FGKKRAIEWEKLHEIAIGTAK 187
++ MTA + EY ENG+L + ++R W +I +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----E 127
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN------------KTH 235
L Y+H Q IIH D+KP N+ +D + + K+ DFGLAK R+ +
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 236 VTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
++ GT Y A E L G K D+YS G++ FE++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGR-TYHINLVRLYGF 143
+G G +G+VYKG+ G A+KV++ + EE+ E+ + + ++H N+ YG
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 144 CHDQHMTA------LVYEYMENGSLDGYLFGKK-RAIEWEKLHEIAIGTAKGLVYLHEEC 196
++ LV E+ GS+ + K ++ E + I +GL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--- 146
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS-- 254
Q ++IH DIK +NVLL N K+ DFG++ DR T + + GTP + APE ++
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACD 204
Query: 255 GNYPITH--KCDVYSFGMVLFEIV 276
N T+ K D++S G+ E+
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMA 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 79 TSNYS--TRLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGR----IAEEQFMAEVGTIGR 131
TS Y +G G +G VYK + P +G +A+K + G I+ + +A + +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 132 TYHINLVRLYGFCHDQHM-----TALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGT 185
H N+VRL C LV+E+++ L YL + E + ++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
+GL +LH C I+H D+KPEN+L+ + + K+ADFGLA++ + ++ T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVTL 175
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
Y APE L + T D++S G + E+ RR+ G +E+
Sbjct: 176 WYRAPEVLLQSTYAT-PVDMWSVGCIFAEMF-RRKPLFCGNSEA 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 182
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 60/307 (19%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLY 141
+G G FG VY + N +A+K ++ + G+ + E++ + EV + + H N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +H LV EY GS L K+ ++ ++ + G +GL YLH +I
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMI 137
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNY 257
H D+K N+LL K+ DFG A + + + GTP + APE + G Y
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQY 191
Query: 258 PITHKCDVYSFGMVLFEIVGRR-----RNAI-----VGATESLDWFPKHVWEEYEKCELG 307
K DV+S G+ E+ R+ NA+ + ES H W EY + +
Sbjct: 192 --DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVD 248
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKPFRYL 367
+ C+Q P+DRP ++K VL P +
Sbjct: 249 S------------------------CLQKIPQDRPTSEVLLKHR----FVLRERPPTVIM 280
Query: 368 DLIKMTR 374
DLI+ T+
Sbjct: 281 DLIQRTK 287
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV-TISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 86 LGFGGFGEVY-----KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG VY K F +K+ K G E Q E+ +H N++RL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG--VEHQLRREIEIQAHLHHPNILRL 88
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y + +D+ L+ EY G L L K + ++ I A L+Y H +++
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH---GKKV 144
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCD--RNKTHVTISGYKGTPGYSAPEFLSGNYP 258
IH DIKPEN+LL K+ADFG + R KT GT Y PE + G
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC------GTLDYLPPEMIEGRMH 198
Query: 259 ITHKCDVYSFGMVLFEIV 276
K D++ G++ +E++
Sbjct: 199 -NEKVDLWCIGVLCYELL 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 79 TSNYS--TRLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGR----IAEEQFMAEVGTIGR 131
TS Y +G G +G VYK + P +G +A+K + G I+ + +A + +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 132 TYHINLVRLYGFCHDQHM-----TALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGT 185
H N+VRL C LV+E+++ L YL + E + ++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
+GL +LH C I+H D+KPEN+L+ + + K+ADFGLA++ + + T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPVVVTL 175
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
Y APE L + T D++S G + E+ RR+ G +E+
Sbjct: 176 WYRAPEVLLQSTYAT-PVDMWSVGCIFAEMF-RRKPLFCGNSEA 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV-TISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------RAIEWEKLHEIAIGT 185
N+V L G C ++ EY G L +L K R +E L +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
A+G+ +L + IH D+ NVLL K+ DFGLA+ + ++ +
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ APE + + T + DV+S+G++L+EI N G
Sbjct: 219 KWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------RAIEWEKLHEIAIGT 185
N+V L G C ++ EY G L +L K R +E L +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
A+G+ +L + IH D+ NVLL K+ DFGLA+ + ++ +
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ APE + + T + DV+S+G++L+EI N G
Sbjct: 227 KWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 155
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 216 SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV-TISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 71 TSLQLNNFTSNYST--RLGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGR-----IAEEQF 122
T + N Y T LG G F V K + G++ A K + + + ++ E
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIA 182
EV + H N++ L+ ++ L+ E + G L +L +K ++ E+ E
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFL 120
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENV-LLDANFSP---KVADFGLAKLCDRNKTHVTI 238
G+ YLH +I H+D+KPEN+ LLD N K+ DFGLA D I
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 239 SGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLF 273
GTP + APE + NY P+ + D++S G++ +
Sbjct: 178 F---GTPEFVAPEIV--NYEPLGLEADMWSIGVITY 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 85 RLGFGGFGE-VYKGQFPNGVKIAVKVLN-RNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G FG+ + +G + +K +N + E+ EV + H N+V+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 143 FCHDQHMTALVYEYMENGSL-------DGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
+ +V +Y E G L G LF + + ++W + L ++H+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVHD- 143
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
++I+H DIK +N+ L + + ++ DFG+A++ N T GTP Y +PE +
Sbjct: 144 --RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPE-ICE 198
Query: 256 NYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESL 290
N P +K D+++ G VL+E+ + G+ ++L
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 27/270 (10%)
Query: 85 RLGFGGFGEVYKGQ-FPNGVKIAVKVLN--RNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
++G G F EVY+ +GV +A+K + + A + E+ + + H N+++ Y
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 142 G-FCHDQHMTALVYEYMENGSLD---GYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
F D + +V E + G L + +KR I + + + L ++H
Sbjct: 99 ASFIEDNELN-IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS--- 154
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY 257
+R++H DIKP NV + A K+ D GL + T GTP Y +PE + N
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHEN- 211
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCGIEE 317
K D++S G +L+E+ ++ G +L K + E+C+ +
Sbjct: 212 GYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKI----EQCDYPPL-------- 258
Query: 318 KDKEKAKRLCMVALWCVQDSPEDRPPMSAV 347
++ L + C+ PE RP ++ V
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 145
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 60/307 (19%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQF---MAEVGTIGRTYHINLVRLY 141
+G G FG VY + N +A+K ++ + G+ + E++ + EV + + H N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G +H LV EY GS L K+ ++ ++ + G +GL YLH +I
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMI 176
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL----SGNY 257
H D+K N+LL K+ DFG A + + + GTP + APE + G Y
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQY 230
Query: 258 PITHKCDVYSFGMVLFEIVGRR-----RNAI-----VGATESLDWFPKHVWEEYEKCELG 307
K DV+S G+ E+ R+ NA+ + ES H W EY + +
Sbjct: 231 --DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVD 287
Query: 308 AMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLEGVVEVLPPPKPFRYL 367
+ C+Q P+DRP ++K VL P +
Sbjct: 288 S------------------------CLQKIPQDRPTSEVLLKHR----FVLRERPPTVIM 319
Query: 368 DLIKMTR 374
DLI+ T+
Sbjct: 320 DLIQRTK 326
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 84 TRLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ------FMAEVGTIGRTYHIN 136
T+LG G +GEVYK +A+K + R+ E+ + EV + H N
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRI-----RLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
++ L H H L++EY EN L Y+ K + + G+ + H
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCH--- 149
Query: 197 QQRIIHYDIKPENVLL---DANFSP--KVADFGLAK---LCDRNKTHVTISGYKGTPGYS 248
+R +H D+KP+N+LL DA+ +P K+ DFGLA+ + R TH I+ + Y
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW-----YR 204
Query: 249 APEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE L G+ + D++S + E++
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 183
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 152
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 213 SIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 153
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 214 SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 144
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 205 SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG V++ + G A K + +E E+ T+ H LV L+
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
D + ++YE+M G L + + + ++ E KGL ++HE +H D
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLD 174
Query: 205 IKPENVLLDANFSP--KVADFGL-AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
+KPEN++ S K+ DFGL A L + VT GT ++APE G P+ +
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGK-PVGY 229
Query: 262 KCDVYSFGMVLFEIV-------GRRRNAIVGATESLDW 292
D++S G++ + ++ G + + +S DW
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 267
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 180
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 182
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 145
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 206 SIDIWSVGCILAEMLSNR 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQ---FMAEVGTIGRTYHINLVRLYG 142
+G G FG+VY G++ V I + + R+ E+Q F EV +T H N+V G
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERD----NEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C A++ + +L + K ++ K +IA KG+ YLH + I+H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 203 YDIKPENVLLDANFSPKVADFGLAKL-----CDRNKTHVTISGYKGTPGYSAPEFL---- 253
D+K +NV D N + DFGL + R + + I G + APE +
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEIIRQLS 210
Query: 254 ----SGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAM 309
P + DV++ G + +E+ R E++ +W+ +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI------IWQMGTGMKPNLS 264
Query: 310 ILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKMLE 352
+G G E D + L+C E+RP + ++ MLE
Sbjct: 265 QIGMGKEISD---------ILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKVLNRN--LGRIAEEQFMAEVGTIGRTY-HINLVRLY 141
+G G FG+V + V AVKVL + L + E+ M+E + + H LV L+
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
V +Y+ G L Y ++R + A A L YLH I+
Sbjct: 106 FSFQTADKLYFVLDYINGGEL-FYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIV 161
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTH-VTISGYKGTPGYSAPEFLSGNYPIT 260
+ D+KPEN+LLD+ + DFG LC N H T S + GTP Y APE L P
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCGTPEYLAPEVLHKQ-PYD 217
Query: 261 HKCDVYSFGMVLFEIV 276
D + G VL+E++
Sbjct: 218 RTVDWWCLGAVLYEML 233
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV-TISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 208 SIDIWSVGCILAEMLSNR 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 184
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 128
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 183
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 184 STAVDIWSLGCIFAEMVTRR 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE-------EQFMA 124
L +N+F+ + +G GGFGEVY + + K+ A+K L++ ++ + E+ M
Sbjct: 186 LTMNDFSVHRI--IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIG 184
+ + G I + Y F H + + + M G L Y + + A
Sbjct: 244 SLVSTGDCPFIVCMS-YAF-HTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAE 300
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
GL ++H + +++ D+KP N+LLD + +++D GLA + K H ++ GT
Sbjct: 301 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 353
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GY APE L D +S G +LF+++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE-------EQFMA 124
L +N+F+ + +G GGFGEVY + + K+ A+K L++ ++ + E+ M
Sbjct: 186 LTMNDFSVHRI--IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIG 184
+ + G I + Y F H + + + M G L Y + + A
Sbjct: 244 SLVSTGDCPFIVCMS-YAF-HTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAE 300
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
GL ++H + +++ D+KP N+LLD + +++D GLA + K H ++ GT
Sbjct: 301 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 353
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GY APE L D +S G +LF+++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 126
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 181
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 182 STAVDIWSLGCIFAEMVTRR 201
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 86 LGFGGFGEVYK-GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG V++ + G A K + +E E+ T+ H LV L+
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
D + ++YE+M G L + + + ++ E KGL ++HE +H D
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLD 280
Query: 205 IKPENVLLDANFSP--KVADFGL-AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
+KPEN++ S K+ DFGL A L + VT GT ++APE G P+ +
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGK-PVGY 335
Query: 262 KCDVYSFGMVLFEIV-------GRRRNAIVGATESLDW 292
D++S G++ + ++ G + + +S DW
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 373
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 69 RFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAE 125
+ LQ+ + +G G FGEV + K+ A+K+L++ + R F E
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 126 VGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
+ +V+L+ D +V EYM G L + +W K + T
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY-----T 180
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
A+ ++ L +IH D+KP+N+LLD + K+ADFG D V GTP
Sbjct: 181 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-VHCDTAVGTP 239
Query: 246 GYSAPEFL---SGNYPITHKCDVYSFGMVLFEIV 276
Y +PE L G+ +CD +S G+ LFE++
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
LG G FGEVY+G + N + +AVK ++ +E+FM+E + H ++V+L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ T ++ E G L YL K +++ L ++ K + YL +
Sbjct: 76 GIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 131
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI N+L+ + K+ DFGL++ + ++ + S + + +PE ++ T
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRR-FTT 189
Query: 262 KCDVYSFGMVLFEIVGRRRNA--------IVGATESLDWFPK 295
DV+ F + ++EI+ + ++G E D PK
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 231
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 125
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 180
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 181 STAVDIWSLGCIFAEMVTRR 200
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
LG G FGEVY+G + N + +AVK ++ +E+FM+E + H ++V+L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ T ++ E G L YL K +++ L ++ K + YL +
Sbjct: 92 GIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 147
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI N+L+ + K+ DFGL++ + ++ + S + + +PE ++ T
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRR-FTT 205
Query: 262 KCDVYSFGMVLFEIVGRRRNA--------IVGATESLDWFPK 295
DV+ F + ++EI+ + ++G E D PK
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 247
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 184
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 130
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 185
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 186 STAVDIWSLGCIFAEMVTRR 205
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE-------EQFMA 124
L +N+F+ + +G GGFGEVY + + K+ A+K L++ ++ + E+ M
Sbjct: 185 LTMNDFSVHRI--IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIG 184
+ + G I + Y F H + + + M G L Y + + A
Sbjct: 243 SLVSTGDCPFI-VCMSYAF-HTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAE 299
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
GL ++H + +++ D+KP N+LLD + +++D GLA + K H ++ GT
Sbjct: 300 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 352
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GY APE L D +S G +LF+++
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 127
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 182
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 183 STAVDIWSLGCIFAEMVTRR 202
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAE-------EQFMA 124
L +N+F+ + +G GGFGEVY + + K+ A+K L++ ++ + E+ M
Sbjct: 186 LTMNDFSVHRI--IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIG 184
+ + G I + Y F H + + + M G L Y + + A
Sbjct: 244 SLVSTGDCPFI-VCMSYAF-HTPDKLSFILDLMNGGDLH-YHLSQHGVFSEADMRFYAAE 300
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
GL ++H + +++ D+KP N+LLD + +++D GLA + K H ++ GT
Sbjct: 301 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 353
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
GY APE L D +S G +LF+++
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E++ I + +GL + H R++H
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 184
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC- 144
+G G +GEV++G + G +AVK+ + +E+ + T + + GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 145 ------HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
H L+ Y E GSL YL + ++ I + A GL +LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N +AD GLA + ++ + + GT Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 252 FLSGNYPIT-----HKCDVYSFGMVLFEIVGRR-RNAIV 284
L + + D+++FG+VL+E+ R N IV
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 85 RLGFGGFGEVYKGQFP-NGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G VYK + G +A+K + + + E+ + H N+V+L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
H ++ LV+E+++ I + +GL + H R++H
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLH 129
Query: 203 YDIKPENVLLDANFSPKVADFGLAK---LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KP+N+L++ + K+ADFGLA+ + R H ++ + Y APE L G
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAPEILLGCKYY 184
Query: 260 THKCDVYSFGMVLFEIVGRR 279
+ D++S G + E+V RR
Sbjct: 185 STAVDIWSLGCIFAEMVTRR 204
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC- 144
+G G +GEV++G + G +AVK+ + +E+ + T + + GF
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 145 ------HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC-- 196
H L+ Y E GSL YL + ++ I + A GL +LH E
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 197 ---QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPE 251
+ I H D+K +N+L+ N +AD GLA + ++ + + GT Y APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 252 FLSGNYPIT-----HKCDVYSFGMVLFEIVGRR-RNAIV 284
L + + D+++FG+VL+E+ R N IV
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 86 LGFGGFGEVYKGQFPN----GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
LG G FGEVY+G + N + +AVK ++ +E+FM+E + H ++V+L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G ++ T ++ E G L YL K +++ L ++ K + YL +
Sbjct: 80 GIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCV 135
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H DI N+L+ + K+ DFGL++ + ++ + S + + +PE ++ T
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPESINFRR-FTT 193
Query: 262 KCDVYSFGMVLFEIVGRRRNA--------IVGATESLDWFPK 295
DV+ F + ++EI+ + ++G E D PK
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 235
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 79 TSNYS--TRLGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGR----IAEEQFMAEVGTIGR 131
TS Y +G G +G VYK + P +G +A+K + G I+ + +A + +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 132 TYHINLVRLYGFCHDQHM-----TALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIAIGT 185
H N+VRL C LV+E+++ L YL + E + ++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
+GL +LH C I+H D+KPEN+L+ + + K+ADFGLA++ + + T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVTL 175
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
Y APE L + T D++S G + E+ RR+ G +E+
Sbjct: 176 WYRAPEVLLQSTYAT-PVDMWSVGCIFAEMF-RRKPLFCGNSEA 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR---LYG 142
+G G +GEV++G + G +AVK+ + E+ + E Y+ ++R + G
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRET----ELYNTVMLRHENILG 95
Query: 143 FC-------HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
F H L+ Y E GSL YL + ++ I + A GL +LH E
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 196 C-----QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYS 248
+ I H D+K +N+L+ N +AD GLA + ++ + + GT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 249 APEFLSGNYPIT-----HKCDVYSFGMVLFEIVGRR-RNAIV 284
APE L + + D+++FG+VL+E+ R N IV
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 255
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+LG G +G VYK G +A+K + ++ + E+ + + ++V+ YG
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVVKYYGS 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
+V EY GS+ + + + + +++ I T KGL YLH R IH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHR 149
Query: 204 DIKPENVLLDANFSPKVADFGLA-KLCDR-NKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
DIK N+LL+ K+ADFG+A +L D K + I GTP + APE + I +
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI----GTPFWMAPEVIQ---EIGY 202
Query: 262 KC--DVYSFGMVLFEIV-GRRRNAIVGATESLDWFPKHVWEEYEKCEL 306
C D++S G+ E+ G+ A + ++ P + + K EL
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPEL 250
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A++ ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY D Y K + + + + +GL Y+H ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 149
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 208
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 149
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 208
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG VY + N +A+KVL ++ E Q E+ H N++R+Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ HD+ L+ E+ G L L R E ++ A L Y HE +++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEELADALHYCHE---RKVIH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH- 261
DIKPEN+L+ K+ADFG + + GT Y PE + G TH
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGK---THD 190
Query: 262 -KCDVYSFGMVLFEIV 276
K D++ G++ +E +
Sbjct: 191 EKVDLWCAGVLCYEFL 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG VY + N +A+KVL ++ E Q E+ H N++R+Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ HD+ L+ E+ G L L R E ++ A L Y HE +++IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEELADALHYCHE---RKVIH 137
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH- 261
DIKPEN+L+ K+ADFG + + GT Y PE + G TH
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGK---THD 190
Query: 262 -KCDVYSFGMVLFEIV 276
K D++ G++ +E +
Sbjct: 191 EKVDLWCAGVLCYEFL 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 147
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 206
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 207 SKSDVWSFGVLMWE 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 139
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 198
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 199 SKSDVWSFGVLMWE 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG G FG VY + N +A+KVL ++ E Q E+ H N++R+Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ HD+ L+ E+ G L L R E ++ A L Y HE +++IH
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEELADALHYCHE---RKVIH 138
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH- 261
DIKPEN+L+ K+ADFG + + GT Y PE + G TH
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGK---THD 191
Query: 262 -KCDVYSFGMVLFEIV 276
K D++ G++ +E +
Sbjct: 192 EKVDLWCAGVLCYEFL 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 105/260 (40%), Gaps = 52/260 (20%)
Query: 72 SLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGR 131
SL L+N +G G +G VYKG + +AVKV + A Q I R
Sbjct: 9 SLDLDNL--KLLELIGRGRYGAVYKGSL-DERPVAVKVFS-----FANRQNFINEKNIYR 60
Query: 132 T---YHINLVRLYGFCHDQHMTA-------LVYEYMENGSLDGYLFGKKRAIEWEKLHEI 181
H N+ R D+ +TA LV EY NGSL YL +W +
Sbjct: 61 VPLMEHDNIARF--IVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRL 116
Query: 182 AIGTAKGLVYLHEEC------QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNK-- 233
A +GL YLH E + I H D+ NVL+ + + ++DFGL+ N+
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 234 -----THVTISGYKGTPGYSAPEFLSGNYPI------THKCDVYSFGMVLFEIVGRRRNA 282
+ IS GT Y APE L G + + D+Y+ G++ +EI R
Sbjct: 177 RPGEEDNAAISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR---- 231
Query: 283 IVGATESLDWFPKHVWEEYE 302
D FP EY+
Sbjct: 232 ------CTDLFPGESVPEYQ 245
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 129
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 188
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 189 SKSDVWSFGVLMWE 202
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 127
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 186
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 187 SKSDVWSFGVLMWE 200
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG G F V + + P G + A K++N + Q + I R H N+VRL+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
++ LV++ + G L + ++ E + H I + ++ C I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI-----QQILESVNHCHLNGIVH 126
Query: 203 YDIKPENVLLDAN---FSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+LL + + K+ADFGLA + G+ GTPGY +PE L + P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKD-PY 183
Query: 260 THKCDVYSFGMVLF 273
D+++ G++L+
Sbjct: 184 GKPVDMWACGVILY 197
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKL--CDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
H D+ NVLL K++DFGL+K D N G K + APE ++ Y
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-KWPVKWYAPECIN-YYKF 191
Query: 260 THKCDVYSFGMVLFE 274
+ K DV+SFG++++E
Sbjct: 192 SSKSDVWSFGVLMWE 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG+V K + + A+K + +++ ++EV + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLNHQYVVRYYAAW 71
Query: 145 HDQH-----MTA--------LVYEYMENGSLDGYL----FGKKRAIEWEKLHEIAIGTAK 187
++ MTA + EY EN +L + ++R W +I +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----E 127
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN------------KTH 235
L Y+H Q IIH D+KP N+ +D + + K+ DFGLAK R+ +
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 236 VTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
++ GT Y A E L G K D+YS G++ FE++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 133
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 192
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 193 SKSDVWSFGVLMWE 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 121/308 (39%), Gaps = 56/308 (18%)
Query: 82 YSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHI 135
Y +G G FG V++ + P + +AVK+L + F E + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 136 NLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--------------- 180
N+V+L G C L++EYM G L+ +L H
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 181 --------IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
IA A G+ YL E ++ +H D+ N L+ N K+ADFGL++ +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNI-YS 226
Query: 233 KTHVTISGYKGTP-GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG-ATESL 290
+ G P + PE + N T + DV+++G+VL+EI G A E +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
Query: 291 DWFPK--HVWEEYEKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVI 348
++ + ++ E C L + RLC L P DRP ++
Sbjct: 286 IYYVRDGNILACPENCPL------------ELYNLMRLCWSKL------PADRPSFCSIH 327
Query: 349 KMLEGVVE 356
++L+ + E
Sbjct: 328 RILQRMCE 335
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A+K++++ I + E+ + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 130
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 131 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 184
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A+K++++ I + E+ + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 130
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 131 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 184
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A+K++++ I + E+ + +
Sbjct: 14 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 73 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 129
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 130 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 183
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
Query: 79 TSNYS--TRLGFGGFGEVYKGQFPNGVKI----AVKVLNRNLGR----IAEEQFMAEVGT 128
TS Y +G G +G VYK + P+ +V+V N G I+ + +A +
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 129 IGRTYHINLVRLYGFCHDQHM-----TALVYEYMENGSLDGYLF-GKKRAIEWEKLHEIA 182
+ H N+VRL C LV+E+++ L YL + E + ++
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
+GL +LH C I+H D+KPEN+L+ + + K+ADFGLA++ + ++
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVV 180
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
T Y APE L + T D++S G + E+ RR+ G +E+
Sbjct: 181 VTLWYRAPEVLLQSTYAT-PVDMWSVGCIFAEMF-RRKPLFCGNSEA 225
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A+K++++ I + E+ + +
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 130
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 131 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 184
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 19/189 (10%)
Query: 90 GFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHM 149
G G+ Y +F I + L+ + ++ E+ EV + H N++ L+ ++
Sbjct: 28 GTGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82
Query: 150 TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPEN 209
L+ E + G L +L +K ++ ++ + G+ YLH +RI H+D+KPEN
Sbjct: 83 VVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPEN 138
Query: 210 V-LLDANF-SP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PITHKCD 264
+ LLD N +P K+ DFG+A + I GTP + APE + NY P+ + D
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIV--NYEPLGLEAD 193
Query: 265 VYSFGMVLF 273
++S G++ +
Sbjct: 194 MWSIGVITY 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 19/189 (10%)
Query: 90 GFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHM 149
G G+ Y +F I + L+ + ++ E+ EV + H N++ L+ ++
Sbjct: 35 GTGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 89
Query: 150 TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPEN 209
L+ E + G L +L +K ++ ++ + G+ YLH +RI H+D+KPEN
Sbjct: 90 VVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPEN 145
Query: 210 V-LLDANF-SP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PITHKCD 264
+ LLD N +P K+ DFG+A + I GTP + APE + NY P+ + D
Sbjct: 146 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIV--NYEPLGLEAD 200
Query: 265 VYSFGMVLF 273
++S G++ +
Sbjct: 201 MWSIGVITY 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG G F V + + P G + A K++N + Q + I R H N+VRL+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR-IIH 202
++ LV++ + G L + ++ E + H I + ++ C I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI-----QQILESVNHCHLNGIVH 126
Query: 203 YDIKPENVLLDAN---FSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
D+KPEN+LL + + K+ADFGLA + G+ GTPGY +PE L + P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKD-PY 183
Query: 260 THKCDVYSFGMVLF 273
D+++ G++L+
Sbjct: 184 GKPVDMWACGVILY 197
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A+K++++ I + E+ + +
Sbjct: 21 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 80 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 136
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 137 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 190
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 437 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 491
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 550
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 551 SKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 86 LGFGGFGEVYKGQFP---NGVKIAVKVLNRNLGRIA-EEQFMAEVGTIGRTYHINLVRLY 141
LG G FG V KG + +AVK+L A +++ +AE + + + +VR+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
G C + LV E E G L+ YL + R ++ + + E+ + G+ YL E +
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SNFV 492
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP-GYSAPEFLSGNYPIT 260
H D+ NVLL K++DFGL+K ++ + + P + APE ++ Y +
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFS 551
Query: 261 HKCDVYSFGMVLFE 274
K DV+SFG++++E
Sbjct: 552 SKSDVWSFGVLMWE 565
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 81 NYSTRLGFGGFGEVYKG-QFPNGVKIA-VKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
+ +G G F VYKG V++A ++ +R L + ++F E + H N+V
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 139 RLY----GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
R Y + LV E +G+L YL + + + + L KGL +LH
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 195 ECQQRIIHYDIKPENVLLDA-NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
IIH D+K +N+ + S K+ D GLA L + I GTP + APE
Sbjct: 148 RTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTPEFXAPEXY 202
Query: 254 SGNYPITHKCDVYSFGMVLFE 274
Y DVY+FG E
Sbjct: 203 EEKYD--ESVDVYAFGXCXLE 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 20/236 (8%)
Query: 64 REKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNLGRIAEEQF 122
RE +SL L +F + +G G + +V + +I A+KV+ + L + +++
Sbjct: 8 RESGKASSSLGLQDF--DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--VNDDED 63
Query: 123 MAEVGTIGRTY-----HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK 177
+ V T + H LV L+ + V EY+ G L + ++R + E
Sbjct: 64 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEH 122
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
+ + L YLHE + II+ D+K +NVLLD+ K+ D+G+ K R T
Sbjct: 123 ARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--T 177
Query: 238 ISGYKGTPGYSAPEFLSG-NYPITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLD 291
S + GTP Y APE L G +Y + D ++ G+++FE++ GR IVG++++ D
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPD 231
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 149
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H ++ Y T Y APE + + T
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 210 SIDIWSVGCILAEMLSNR 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 90 GFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHM 149
G G+ Y +F I + L + ++ E+ EV + H N++ L+ ++
Sbjct: 49 GTGKEYAAKF-----IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 103
Query: 150 TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPEN 209
L+ E + G L +L +K ++ ++ + G+ YLH +RI H+D+KPEN
Sbjct: 104 VVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPEN 159
Query: 210 V-LLDANF-SP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY-PITHKCD 264
+ LLD N +P K+ DFG+A + I GTP + APE + NY P+ + D
Sbjct: 160 IMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIV--NYEPLGLEAD 214
Query: 265 VYSFGMVLF 273
++S G++ +
Sbjct: 215 MWSIGVITY 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 86 LGFGGFGEVYK----GQFPNGVKI--AVKVLNRNLGRIAEEQFMAEVGTIGRT-YHINLV 138
LG G FG+V G GV I AVK+L E M+E+ + + H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKR----------------------AIEWE 176
L G C L++EY G L YL K+ + +E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 177 KLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
L A AKG+ +L + +H D+ NVL+ K+ DFGLA+ + +V
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 237 TISGYKGTPGYSAPEFL-SGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ + APE L G Y I K DV+S+G++L+EI N G
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTI--KSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINL-VRLYGF 143
LG G +G V K + P+G +AVK + + +++ + ++ RT V YG
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 144 CHDQHMTALVYEYMENGSLDGY---LFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + E M+ SLD + + K + I + L +IA+ K L +LH + +
Sbjct: 119 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGYSAPEFLSGNYP 258
IH D+KP NVL++A K+ DFG++ + +G K P PE Y
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 259 ITHKCDVYSFGMVLFEIVGRR 279
+ K D++S G+ + E+ R
Sbjct: 236 V--KSDIWSLGITMIELAILR 254
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 78 FTSNYSTR--LGFGGFGEVYKGQFPNGVK-IAVKVLNR------------NLGRIAEEQF 122
++ YST LG G FG V+ K + VK + + LG++
Sbjct: 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT---- 77
Query: 123 MAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI- 181
E+ + R H N++++ +Q LV E +G LD + F + E L
Sbjct: 78 -LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYI 135
Query: 182 --AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTIS 239
+ +A G + L + IIH DIK EN+++ +F+ K+ DFG A +R K T
Sbjct: 136 FRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-- 188
Query: 240 GYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
+ GT Y APE L GN + +++S G+ L+ +V
Sbjct: 189 -FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 86 LGFGGFGEVYKGQFPN------GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V+ + N + +AVK L + A + F E + H ++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 84
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF-----------GKKRA---IEWEKLHEIAIGT 185
+G C + +V+EYM +G L+ +L G+ A + +L +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKT-HVTISGYKGT 244
A G+VYL +H D+ N L+ K+ DFG+++ D T + + G
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 199
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV--GRRRNAIVGATESLDWFPK-HVWEEY 301
P P T + DV+SFG+VL+EI G++ + TE++D + E
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 259
Query: 302 EKC--ELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSP 338
C E+ A++ GC E + + + L + +P
Sbjct: 260 RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 298
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 105 IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDG 164
AVK++++ + +++ A G H N+V+L+ HDQ T LV E + G L
Sbjct: 39 FAVKIISKRMEANTQKEITALKLCEG---HPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95
Query: 165 YLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLL---DANFSPKVA 221
+ KK E E + I + ++H+ ++H D+KPEN+L + N K+
Sbjct: 96 RIKKKKHFSETEASY-IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKII 151
Query: 222 DFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
DFG A+L + + + T Y+APE L+ N CD++S G++L+ ++
Sbjct: 152 DFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQN-GYDESCDLWSLGVILYTMLS 204
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAV--KVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V K + + +I K L + ++ ++ M E+ + + H NLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 144 CHDQHMTALVYEYMENGSLDGY-LFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
C + LV+E++++ LD LF ++++ + + G+ + H IIH
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCH---SHNIIH 147
Query: 203 YDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
DIKPEN+L+ + K+ DFG A+ L + + T Y APE L G+
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY---DDEVATRWYRAPELLVGDVKYGK 204
Query: 262 KCDVYSFGMVLFEI 275
DV++ G ++ E+
Sbjct: 205 AVDVWAIGCLVTEM 218
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 86 LGFGGFGEVYKGQFPN------GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V+ + N + +AVK L + A + F E + H ++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 78
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLF-----------GKKRA---IEWEKLHEIAIGT 185
+G C + +V+EYM +G L+ +L G+ A + +L +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKT-HVTISGYKGT 244
A G+VYL +H D+ N L+ K+ DFG+++ D T + + G
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 193
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV--GRRRNAIVGATESLDWFPK-HVWEEY 301
P P T + DV+SFG+VL+EI G++ + TE++D + E
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 253
Query: 302 EKC--ELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSP 338
C E+ A++ GC E + + + L + +P
Sbjct: 254 RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 292
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 53/285 (18%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-- 142
+G GGFG+V+K + +G +K + N E+ EV + + H+N+V G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCW 73
Query: 143 --FCHDQHMTA------------LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAI--GTA 186
F +D ++ + E+ + G+L+ ++ K+R + +K+ + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQIT 132
Query: 187 KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPG 246
KG+ Y+H +++I+ D+KP N+ L K+ DFGL + KGT
Sbjct: 133 KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR---SKGTLR 186
Query: 247 YSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCEL 306
Y +PE +S + D+Y+ G++L E++ + A E+ +F +L
Sbjct: 187 YMSPEQISSQ-DYGKEVDLYALGLILAELL----HVCDTAFETSKFF----------TDL 231
Query: 307 GAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKML 351
I+ ++K+K ++L + PEDRP S +++ L
Sbjct: 232 RDGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRTL 269
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 32/279 (11%)
Query: 86 LGFGGFGEVYKGQFPN------GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG G FG+V+ + N + +AVK L + A + F E + H ++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 107
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYL-----------FGKKRA---IEWEKLHEIAIGT 185
+G C + +V+EYM +G L+ +L G+ A + +L +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKT-HVTISGYKGT 244
A G+VYL +H D+ N L+ K+ DFG+++ D T + + G
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTML 222
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV--GRRRNAIVGATESLDWFPK-HVWEEY 301
P P T + DV+SFG+VL+EI G++ + TE++D + E
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 282
Query: 302 EKC--ELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSP 338
C E+ A++ GC E + + + L + +P
Sbjct: 283 RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 78 FTSNYST--RLGFGGFGEVYK--GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
FT +Y LG G F V + + P + A K++N + Q + I R
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQ-EYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 134 -HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYL 192
H N+VRL+ ++ LV++ + G L + ++ E + H I + + ++
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-QILESVNHI 146
Query: 193 HEECQQRIIHYDIKPENVLLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
H Q I+H D+KPEN+LL + + K+ADFGLA + G+ GTPGY +
Sbjct: 147 H---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLS 201
Query: 250 PEFLSGNYPITHKCDVYSFGMVLF 273
PE L + P D+++ G++L+
Sbjct: 202 PEVLRKD-PYGKPVDIWACGVILY 224
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H LV L+ + V EY+ G L + ++R + E + + L YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
E + II+ D+K +NVLLD+ K+ D+G+ K R T S + GTP Y APE L
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL 225
Query: 254 SG-NYPITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLD 291
G +Y + D ++ G+++FE++ GR IVG++++ D
Sbjct: 226 RGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
++ LG G F EV + K +A+K + + E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L L+ + + G L + K E + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-SRLIFQVLDAVKYLHD---LG 136
Query: 200 IIHYDIKPENVL---LDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KPEN+L LD + ++DFGL+K+ D +S GTPGY APE L+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQK 193
Query: 257 YPITHKCDVYSFGMVLF 273
P + D +S G++ +
Sbjct: 194 -PYSKAVDCWSIGVIAY 209
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A++++++ I + E+ + +
Sbjct: 140 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 199 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 255
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 256 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 309
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
++ LG G F EV + K +A+K + + E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L L+ + + G L + K E + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-SRLIFQVLDAVKYLHD---LG 136
Query: 200 IIHYDIKPENVL---LDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KPEN+L LD + ++DFGL+K+ D +S GTPGY APE L+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQK 193
Query: 257 YPITHKCDVYSFGMVLF 273
P + D +S G++ +
Sbjct: 194 -PYSKAVDCWSIGVIAY 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 83 STRLGFGGFGEVYKGQFPNGV--KIAVKVLNRNLGRIAEEQ-------FMAEVGTIGRTY 133
S LG G GEV K F K+A++++++ I + E+ + +
Sbjct: 154 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWE-KLHEIAIGTAKGLVYL 192
H ++++ F D +V E ME G L + G KR E KL+ + A + YL
Sbjct: 213 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYL 269
Query: 193 HEECQQRIIHYDIKPENVLLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
HE IIH D+KPENVLL + + K+ DFG +K+ T+ GTP Y A
Sbjct: 270 HE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLA 323
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLF 273
PE L G D +S G++LF
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 78 FTSNYST--RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
F S Y LG G F V + + G + A K++N + Q + I R
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+VRL+ ++ L+++ + G L + ++ E + H I + +++ H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCH 138
Query: 194 EECQQRIIHYDIKPENVLLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAP 250
Q ++H D+KPEN+LL + + K+ADFGLA + + G+ GTPGY +P
Sbjct: 139 ---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSP 193
Query: 251 EFLSGNYPITHKCDVYSFGMVLF 273
E L + P D+++ G++L+
Sbjct: 194 EVLRKD-PYGKPVDLWACGVILY 215
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
++ LG G F EV + K +A+K + + E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L L+ + + G L + K E + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-SRLIFQVLDAVKYLHD---LG 136
Query: 200 IIHYDIKPENVL---LDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KPEN+L LD + ++DFGL+K+ D +S GTPGY APE L+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQK 193
Query: 257 YPITHKCDVYSFGMVLF 273
P + D +S G++ +
Sbjct: 194 -PYSKAVDCWSIGVIAY 209
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 151
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H + T Y APE + + T
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 212 SIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G +G V N V++A+K ++ + ++ + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 145 HDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
+ + VY + D Y K + + + + +GL Y+H ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 152
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGTPGYSAPEFLSGNYPITH 261
D+KP N+LL+ K+ DFGLA++ D + H + T Y APE + + T
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 262 KCDVYSFGMVLFEIVGRR 279
D++S G +L E++ R
Sbjct: 213 SIDIWSVGCILAEMLSNR 230
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H LV L+ + V EY+ G L + ++R + E + + L YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
E + II+ D+K +NVLLD+ K+ D+G+ K R T S + GTP Y APE L
Sbjct: 128 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEIL 182
Query: 254 SG-NYPITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLD 291
G +Y + D ++ G+++FE++ GR IVG++++ D
Sbjct: 183 RGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H LV L+ + V EY+ G L + ++R + E + + L YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
E + II+ D+K +NVLLD+ K+ D+G+ K R T S + GTP Y APE L
Sbjct: 124 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEIL 178
Query: 254 SG-NYPITHKCDVYSFGMVLFEIV-GRRRNAIVGATESLD 291
G +Y + D ++ G+++FE++ GR IVG++++ D
Sbjct: 179 RGEDYGFS--VDWWALGVLMFEMMAGRSPFDIVGSSDNPD 216
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G G FGEV + + K+ A+K+L++ + R F E + +V+L+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
D +V EYM G L + +W + + TA+ ++ L IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 196
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS---GNYPI 259
D+KP+N+LLD + K+ADFG ++ + V GTP Y +PE L G+
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYISPEVLKSQGGDGYY 255
Query: 260 THKCDVYSFGMVLFEIV 276
+CD +S G+ L+E++
Sbjct: 256 GRECDWWSVGVFLYEML 272
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G G FGEV + + K+ A+K+L++ + R F E + +V+L+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
D +V EYM G L + +W + + TA+ ++ L IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 191
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS---GNYPI 259
D+KP+N+LLD + K+ADFG ++ + V GTP Y +PE L G+
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYISPEVLKSQGGDGYY 250
Query: 260 THKCDVYSFGMVLFEIV 276
+CD +S G+ L+E++
Sbjct: 251 GRECDWWSVGVFLYEML 267
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
++ LG G F EV + K +A+K + + E E+ + + H N+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
L L+ + + G L + K E + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA-SRLIFQVLDAVKYLHD---LG 136
Query: 200 IIHYDIKPENVL---LDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
I+H D+KPEN+L LD + ++DFGL+K+ D +S GTPGY APE L+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQK 193
Query: 257 YPITHKCDVYSFGMVLF 273
P + D +S G++ +
Sbjct: 194 -PYSKAVDCWSIGVIAY 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN-LVRLYGF 143
+G G +G V K P+G +AVK + + ++Q + ++ + R+ +V+ YG
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 144 CHDQHMTALVYEYMENGSLDG---YLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ + E M S D Y++ I E L +I + T K L +L E +
Sbjct: 90 LFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--K 146
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN-- 256
IIH DIKP N+LLD + + K+ DFG++ +L D + + G Y APE + +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD----SIAKTRDAGCRPYMAPERIDPSAS 202
Query: 257 ---YPITHKCDVYSFGMVLFEIVGRR 279
Y + + DV+S G+ L+E+ R
Sbjct: 203 RQGYDV--RSDVWSLGITLYELATGR 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 69 RFTSLQLNNFTSNYSTRLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVG 127
R+T LQ +G G +G V ++A+K ++ + ++ + E+
Sbjct: 44 RYTQLQY----------IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQ 93
Query: 128 TIGRTYHINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
+ R H N++ + + A+ VY + D Y K + + + +
Sbjct: 94 ILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI 153
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT-ISGYKGT 244
+GL Y+H ++H D+KP N+L++ K+ DFGLA++ D H ++ T
Sbjct: 154 LRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
Y APE + + T D++S G +L E++ R
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 72 SLQLNNF--TSNYSTRLGFGGFGEVY-KGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT 128
S+Q N T + LG G F EV+ Q G A+K + ++ + E+
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAV 59
Query: 129 IGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKG 188
+ + H N+V L LV + + G L + +R + EK + I
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL--ERGVYTEKDASLVIQQVLS 117
Query: 189 LV-YLHEECQQRIIHYDIKPENVLL---DANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
V YLHE I+H D+KPEN+L + N + DFGL+K+ + + +S GT
Sbjct: 118 AVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGT 170
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
PGY APE L+ P + D +S G++ +
Sbjct: 171 PGYVAPEVLAQK-PYSKAVDCWSIGVITY 198
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G G FGEV + + K+ A+K+L++ + R F E + +V+L+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
D +V EYM G L + +W + + TA+ ++ L IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFIH 196
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS---GNYPI 259
D+KP+N+LLD + K+ADFG ++ + V GTP Y +PE L G+
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPDYISPEVLKSQGGDGYY 255
Query: 260 THKCDVYSFGMVLFEIV 276
+CD +S G+ L+E++
Sbjct: 256 GRECDWWSVGVFLYEML 272
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 81 NYSTRLGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTY 133
N LG G FG+V + + +AVK+L M+E+ I +
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 134 HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGK-----------KRAIEWEKLHEI 181
H+N+V L G C +V E+ + G+L YL K K + E L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY 241
+ AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 242 KGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + T + DV+SFG++L+EI
Sbjct: 207 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N F Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 145 VTMNEF--EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ H L L Y F HD+ V EY G L +L ++R ++
Sbjct: 203 QNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVS 259
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH E + +++ D+K EN++LD + K+ DFGL K + K T+ + GTP Y
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 315
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 316 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N F Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 148 VTMNEF--EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ H L L Y F HD+ V EY G L +L ++R ++
Sbjct: 206 QNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVS 262
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH E + +++ D+K EN++LD + K+ DFGL K + K T+ + GTP Y
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEY 318
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 319 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINL-VRLYGF 143
LG G +G V K + P+G +AVK + + +++ + ++ RT V YG
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 144 CHDQHMTALVYEYMENGSLDGY---LFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + E M+ SLD + + K + I + L +IA+ K L +LH + +
Sbjct: 75 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG--TPGYSAPEFLSGNYP 258
IH D+KP NVL++A K+ DFG++ + +G K P PE Y
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 259 ITHKCDVYSFGMVLFEIVGRR 279
+ K D++S G+ + E+ R
Sbjct: 192 V--KSDIWSLGITMIELAILR 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRT-Y 133
++ LG G FG+V + +K +AVK+L + E M+E+ +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH-------------- 179
H+N+V L G C T ++ EY G L +L K+ + K
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 180 ---EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ AKG+ +L + IH D+ N+LL K+ DFGLA+ + +V
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + N T + DV+S+G+ L+E+
Sbjct: 219 VKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 256
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 7 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 65 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 121
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 122 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 176
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 177 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 2 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 60 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 116
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 33/233 (14%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK----------------------RA 172
N+V L G C ++ EY G L +L K R
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
+E L + A+G+ +L + IH D+ NVLL K+ DFGLA+ +
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
++ + + APE + + T + DV+S+G++L+EI N G
Sbjct: 212 SNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 71 TSLQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVG 127
+ + +N F Y LG G FG+V + G A+K+L + + +E + E
Sbjct: 3 SRVTMNEF--EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 128 TIGRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
+ + H L L Y F HD+ V EY G L +L ++R ++
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEI 117
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTP 245
L YLH E + +++ D+K EN++LD + K+ DFGL K + K T+ + GTP
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTP 173
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
Y APE L N D + G+V++E++ R
Sbjct: 174 EYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRT-Y 133
++ LG G FG+V + +K +AVK+L + E M+E+ +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH-------------- 179
H+N+V L G C T ++ EY G L +L K+ + K
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 180 ---EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ AKG+ +L + IH D+ N+LL K+ DFGLA+ + +V
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + N T + DV+S+G+ L+E+
Sbjct: 221 VKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRT-Y 133
++ LG G FG+V + +K +AVK+L + E M+E+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH-------------- 179
H+N+V L G C T ++ EY G L +L K+ + K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 180 ---EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ AKG+ +L + IH D+ N+LL K+ DFGLA+ + +V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + N T + DV+S+G+ L+E+
Sbjct: 226 VKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 5 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 63 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 119
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 120 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 174
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 175 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 2 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 60 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 116
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 171
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 86 LGFGGFGEVYKGQ-FPNGVK-IAVKVLNRNLGR----IAEEQFMAEVGTIGRTYHINLVR 139
+G G +G+V+K + NG + +A+K + G ++ + +A + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 140 LYGFC-----HDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLH 193
L+ C + LV+E+++ L YL + + E + ++ +GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
R++H D+KP+N+L+ ++ K+ADFGLA++ + ++ T Y APE L
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVL 191
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATE 288
+ T D++S G + E+ RR+ G+++
Sbjct: 192 LQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSD 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 86 LGFGGFGEVYKGQ-FPNGVK-IAVKVLNRNLGR----IAEEQFMAEVGTIGRTYHINLVR 139
+G G +G+V+K + NG + +A+K + G ++ + +A + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 140 LYGFC-----HDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLH 193
L+ C + LV+E+++ L YL + + E + ++ +GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
R++H D+KP+N+L+ ++ K+ADFGLA++ + ++ T Y APE L
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVL 191
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATE 288
+ T D++S G + E+ RR+ G+++
Sbjct: 192 LQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSD 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 81 NYSTRLGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTY 133
N LG G FG+V + + +AVK+L M+E+ I +
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 134 HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGK-----------KRAIEWEKLHEI 181
H+N+V L G C +V E+ + G+L YL K K + E L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY 241
+ AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 242 KGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + T + DV+SFG++L+EI
Sbjct: 207 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 239
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 31/259 (11%)
Query: 63 GREKPVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAE 119
GRE + F ++ + NY + +G G +G VY N K +A+K +NR + +
Sbjct: 10 GREN-LYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID 68
Query: 120 -EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTAL--VYEYMENGSLD-GYLFGKKRAIEW 175
++ + E+ + R ++RLY + +Y +E D LF +
Sbjct: 69 CKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTE 128
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNK-T 234
E + I G ++HE IIH D+KP N LL+ + S KV DFGLA+ + K T
Sbjct: 129 EHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 235 HVT-------------------ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
++ ++ + T Y APE + T D++S G + E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 276 VGRRRNAIVGATESLDWFP 294
+ ++ I T FP
Sbjct: 246 LNMLQSHINDPTNRFPLFP 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 2 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 60 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 116
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEY 171
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 2 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 60 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 116
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N F Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 6 VTMNEF--EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ H L L Y F HD+ V EY G L +L ++R ++
Sbjct: 64 QNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVS 120
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH E + +++ D+K EN++LD + K+ DFGL K + K T+ + GTP Y
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 176
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 177 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRT-Y 133
++ LG G FG+V + +K +AVK+L + E M+E+ +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH-------------- 179
H+N+V L G C T ++ EY G L +L K+ + K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 180 ---EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ AKG+ +L + IH D+ N+LL K+ DFGLA+ + +V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + N T + DV+S+G+ L+E+
Sbjct: 226 VKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 263
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N F Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 7 VTMNEF--EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
+ H L L Y F HD+ V EY G L +L ++R ++
Sbjct: 65 QNSRHPFLTALKYSFQTHDR--LCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVS 121
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH E + +++ D+K EN++LD + K+ DFGL K + K T+ + GTP Y
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEY 177
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 178 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 81 NYSTRLGFGGFGEVYKGQFPNGVK------IAVKVLNRNLGRIAEEQFMAEVGTIGRT-Y 133
++ LG G FG+V + +K +AVK+L + E M+E+ +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH-------------- 179
H+N+V L G C T ++ EY G L +L K+ + K
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 180 ---EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV 236
+ AKG+ +L + IH D+ N+LL K+ DFGLA+ + +V
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 237 TISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + N T + DV+S+G+ L+E+
Sbjct: 203 VKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWEL 240
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 66/298 (22%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG-- 142
+G GGFG+V+K + +G ++ + N E+ EV + + H+N+V G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCW 74
Query: 143 --FCHDQHMTA-------------------------LVYEYMENGSLDGYLFGKKRAIEW 175
F +D + + E+ + G+L+ ++ K+R +
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKL 133
Query: 176 EKLHEIAI--GTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNK 233
+K+ + + KG+ Y+H +++IH D+KP N+ L K+ DFGL +N
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL-KND 189
Query: 234 THVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWF 293
T S KGT Y +PE +S + D+Y+ G++L E++ + A E+ +F
Sbjct: 190 GKRTRS--KGTLRYMSPEQISSQ-DYGKEVDLYALGLILAELL----HVCDTAFETSKFF 242
Query: 294 PKHVWEEYEKCELGAMILGCGIEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIKML 351
+L I+ ++K+K ++L + PEDRP S +++ L
Sbjct: 243 ----------TDLRDGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRTL 283
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEE--QFMAEVGTI 129
+ +N+F +Y LG G FG+V + G A+K+L + + +E + E +
Sbjct: 2 VTMNDF--DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 130 GRTYHINLVRL-YGF-CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
T H L L Y F HD+ V EY G L +L ++R E+
Sbjct: 60 QNTRHPFLTALKYAFQTHDR--LCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVS 116
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
L YLH + +++ DIK EN++LD + K+ DFGL K + T+ + GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE L N D + G+V++E++ R
Sbjct: 172 LAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK-------------KRAIEWEKLHEIAIG 184
L G C +V E+ + G+L YL K K + E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 214 LKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 243
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIA----VKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
++G G +G V+K + +I V++ + + G + E+ + H N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG--VPSSALREICLLKELKHKNIVRL 66
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ H LV+E+ + L Y ++ E + KGL + H + +
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG---TPGYSAPEFLSGNY 257
+H D+KP+N+L++ N K+ADFGLA+ + + Y T Y P+ L G
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR-----AFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ D++S G + E+ R G
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPG 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 82 YSTRLGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+ LG G F EV + G AVK + + + E E+ + + H N+V L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ LV + + G L + K E + + + YLH + I
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-KDASTLIRQVLDAVYYLH---RMGI 141
Query: 201 IHYDIKPENVLL---DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY 257
+H D+KPEN+L D ++DFGL+K+ + T GTPGY APE L+
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC---GTPGYVAPEVLAQK- 197
Query: 258 PITHKCDVYSFGMVLF 273
P + D +S G++ +
Sbjct: 198 PYSKAVDCWSIGVIAY 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 51/215 (23%)
Query: 106 AVKVLNRNLGRIAE----EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGS 161
A+K++N+N R E+ EV + + +H N+ RLY D+ LV E G
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 162 L-----------------------------------DGYLFGKKRAIEW---EKL-HEIA 182
L +G + G + ++++ EKL I
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDAN--FSPKVADFGLAKLCDR--NKTHVTI 238
L YLH Q I H DIKPEN L N F K+ DFGL+K + N + +
Sbjct: 175 RQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 239 SGYKGTPGYSAPEFL-SGNYPITHKCDVYSFGMVL 272
+ GTP + APE L + N KCD +S G++L
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRN--LGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G G FG+V Q + K+ A+K +N+ + R E+ + H LV L+
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
D+ +V + + G L Y + + E + L YL QRIIH
Sbjct: 83 SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIH 138
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI--T 260
D+KP+N+LLD + + DF +A + R I+ GT Y APE S +
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 261 HKCDVYSFGMVLFEIV-GRRRNAIVGATES 289
D +S G+ +E++ GRR I +T S
Sbjct: 196 FAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 86 LGFGGFGEVYKGQ-FPNGVK-IAVKVLNRNLGR----IAEEQFMAEVGTIGRTYHINLVR 139
+G G +G+V+K + NG + +A+K + G ++ + +A + + H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 140 LYGFC-----HDQHMTALVYEYMENGSLDGYLFG-KKRAIEWEKLHEIAIGTAKGLVYLH 193
L+ C + LV+E+++ L YL + + E + ++ +GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
R++H D+KP+N+L+ ++ K+ADFGLA++ + ++ T Y APE L
Sbjct: 138 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRAPEVL 191
Query: 254 SGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATE 288
+ T D++S G + E+ RR+ G+++
Sbjct: 192 LQSSYAT-PVDLWSVGCIFAEMF-RRKPLFRGSSD 224
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 33/245 (13%)
Query: 80 SNYSTR--LGFGGFGEVYKGQFPNGVK-IAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHI 135
NY + +G G +G VY N K +A+K +NR + + ++ + E+ + R
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 136 NLVRLYGFCHDQHMTAL--VYEYMENGSLD-GYLFGKKRAIEWEKLHEIAIGTAKGLVYL 192
++RL+ + + +Y +E D LF + + + I G ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 193 HEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNK-THVT-------------- 237
HE IIH D+KP N LL+ + S K+ DFGLA+ + +K H+
Sbjct: 148 HESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 238 --------ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATES 289
++ + T Y APE + T+ D++S G + E++ ++ I T
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNR 264
Query: 290 LDWFP 294
FP
Sbjct: 265 FPLFP 269
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 81 NYSTRLGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTY 133
N LG G FG+V + + +AVK+L M+E+ I +
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 134 HINLVRLYGFCHDQHMTALV-YEYMENGSLDGYLFGK--------------KRAIEWEKL 178
H+N+V L G C +V E+ + G+L YL K K + E L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 179 HEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTI 238
+ AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 239 SGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ + APE + T + DV+SFG++L+EI
Sbjct: 208 GDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 243
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 70 FTSLQLNNFTSNYST--RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEV 126
++ FT Y LG G F V + + G + A ++N + Q +
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60
Query: 127 GTIGRTY-HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGT 185
I R H N+VRL+ ++ L+++ + G L + ++ E + H I
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QI 119
Query: 186 AKGLVYLHEECQQRIIHYDIKPENVLLDANF---SPKVADFGLAKLCDRNKTHVTISGYK 242
+ +++ H Q ++H ++KPEN+LL + + K+ADFGLA + + G+
Sbjct: 120 LEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFA 174
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLF 273
GTPGY +PE L + P D+++ G++L+
Sbjct: 175 GTPGYLSPEVLRKD-PYGKPVDLWACGVILY 204
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 16/216 (7%)
Query: 77 NFTSNYSTR--LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
N +S++ + LG G +G V P G +A+K + + + + E+ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 134 HINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
H N++ ++ VY E D + + + + + T + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 192 LHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT--------ISGYKG 243
LH +IH D+KP N+L+++N KV DFGLA++ D + + ++ Y
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T Y APE + + + DV+S G +L E+ RR
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 82 YSTRLGFGGFGEVYK------GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YH 134
+ LG G FG+V + G+ +K+AVK+L +E M+E+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKK---------------RAIEWEKLH 179
N+V L G C ++ EY G L +L K+ + L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 180 EIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTIS 239
+ A+G+ +L + IH D+ NVLL K+ DFGLA+ + ++
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 240 GYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ + APE + + T + DV+S+G++L+EI N G
Sbjct: 227 NARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 86 LGFGGFGEVYKGQFP----NGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRL 140
LG G FG V + Q + VK+AVK+L ++ ++ E+F+ E + H ++ +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 141 YGFCHDQH------MTALVYEYMENGSLDGYLFGKKRA-----IEWEKLHEIAIGTAKGL 189
G + ++ +M++G L +L + + + L + A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 190 VYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSA 249
YL + IH D+ N +L + + VADFGL++ + K + A
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVG 285
E L+ N H DV++FG+ ++EI+ R + G
Sbjct: 208 LESLADNLYTVHS-DVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V +G+KIAVK L+R I ++ E+ + H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 116
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 117 --DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 171
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 226
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 187 KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTH-VTISGYKGT 244
+GL Y+H ++IH D+KP N+L++ N K+ DFG+A+ LC H ++ Y T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRR 280
Y APE + + T D++S G + E++ RR+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 187 KGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTH-VTISGYKGT 244
+GL Y+H ++IH D+KP N+L++ N K+ DFG+A+ LC H ++ Y T
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 245 PGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRR 280
Y APE + + T D++S G + E++ RR+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G G FGEV + N K+ A+K+LN+ L R F E + + L+
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 143 FCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
D + LV +Y G L L F + E + + A+ ++ + Q
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY-----LAEMVIAIDSVHQLHY 196
Query: 201 IHYDIKPENVLLDANFSPKVADFG-LAKLCDRNKTHVTISGYKGTPGYSAPEFLS----G 255
+H DIKP+N+L+D N ++ADFG KL + +++ GTP Y +PE L G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGG 254
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+CD +S G+ ++E++
Sbjct: 255 KGRYGPECDWWSLGVCMYEML 275
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK-SAS 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTI--GRTYHINLVRL 140
+G G FGEV + N +I A+K+LN+ L R F E + G I +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH- 140
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y F + H+ LV +Y G L L + + E + IG + ++ + Q
Sbjct: 141 YAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIG--EMVLAIDSIHQLHY 196
Query: 201 IHYDIKPENVLLDANFSPKVADFG-LAKLCDRNKTHVTISGYKGTPGYSAPEFL----SG 255
+H DIKP+NVLLD N ++ADFG K+ D +++ GTP Y +PE L G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDG 254
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+CD +S G+ ++E++
Sbjct: 255 MGKYGPECDWWSLGVCMYEML 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
+G G F V + + G + A K++N + Q + I R H N+VRL+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
++ LV++ + G L + ++ E + H I + +++ H Q ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCH---QMGVVHR 127
Query: 204 DIKPENVLLDANF---SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
D+KPEN+LL + + K+ADFGLA + G+ GTPGY +PE L
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKE-AYG 184
Query: 261 HKCDVYSFGMVLF 273
D+++ G++L+
Sbjct: 185 KPVDIWACGVILY 197
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 83 STRLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRL 140
S LG G + +V NG + AVK++ + G + + EV T+ + + N++ L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH-SRSRVFREVETLYQCQGNKNILEL 76
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
F D LV+E ++ GS+ ++ +K E E + A L +LH + I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREA-SRVVRDVAAALDFLH---TKGI 132
Query: 201 IHYDIKPENVLLDA--NFSP-KVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPE- 251
H D+KPEN+L ++ SP K+ DF L N + I+ + G+ Y APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 252 ---FLSGNYPITHKCDVYSFGMVLF 273
F +CD++S G+VL+
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLY 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 81 NYSTRLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
+ RLG G FGEV++ + G + AVK + + R+ E+ +A G +V
Sbjct: 75 THQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGL----SSPRIVP 128
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
LYG + + E +E GSL G L + + ++ +GL YLH +R
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRR 184
Query: 200 IIHYDIKPENVLLDANFS-PKVADFGLAKLCDR----NKTHVTISGYKGTPGYSAPEFLS 254
I+H D+K +NVLL ++ S + DFG A LC + K+ +T GT + APE +
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G P K D++S ++ ++
Sbjct: 244 GK-PCDAKVDIWSSCCMMLHML 264
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF- 143
LG G FG+V K + + A+K + +++ ++EV + H +VR Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVXLLASLNHQYVVRYYAAW 71
Query: 144 ------------CHDQHMTALVYEYMENGSLDGYL----FGKKRAIEWEKLHEIAIGTAK 187
+ + EY EN +L + ++R W +I +
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----E 127
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN------------KTH 235
L Y+H Q IIH ++KP N+ +D + + K+ DFGLAK R+ +
Sbjct: 128 ALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 236 VTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
++ GT Y A E L G K D YS G++ FE +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 243
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNR--NLGRIAEEQFMAEVGTI--GRTYHINLVRL 140
+G G FGEV + N +I A+K+LN+ L R F E + G I +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH- 156
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y F + H+ LV +Y G L L + + E + IG ++ + Q
Sbjct: 157 YAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIGEM--VLAIDSIHQLHY 212
Query: 201 IHYDIKPENVLLDANFSPKVADFG-LAKLCDRNKTHVTISGYKGTPGYSAPEFL----SG 255
+H DIKP+NVLLD N ++ADFG K+ D +++ GTP Y +PE L G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDG 270
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+CD +S G+ ++E++
Sbjct: 271 MGKYGPECDWWSLGVCMYEML 291
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 243
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 151
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK-SAC 210
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 211 KSSDLWALGCIIYQLVA 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 15/109 (13%)
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
LH I I A+ + +LH + ++H D+KP N+ + KV DFGL D+++ T
Sbjct: 167 LH-IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 238 I----------SGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
+ G GT Y +PE + GN +HK D++S G++LFE++
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELL 270
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
+G GGFG V++ + + A+K + +A E+ M EV + + H +VR +
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 19/181 (10%)
Query: 101 NGVKIAVKVLN-RNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMEN 159
G ++AVK ++ R R E EV + +H N+V +Y +V E++E
Sbjct: 69 TGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 160 GSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPK 219
G+L + + + E++ + + + L YLH Q +IH DIK +++LL ++ K
Sbjct: 127 GALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 181
Query: 220 VADFG----LAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
++DFG ++K + K V GTP + APE +S P + D++S G+++ E+
Sbjct: 182 LSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEM 234
Query: 276 V 276
+
Sbjct: 235 I 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 152 LVYEYMENGSL---DGYLFGKKRA----IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
++YEYMEN S+ D Y F + I + + I Y+H E + I H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177
Query: 205 IKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT-HK 262
+KP N+L+D N K++DFG ++ + D+ I G +GT + PEF S K
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAK 232
Query: 263 CDVYSFGMVLF 273
D++S G+ L+
Sbjct: 233 VDIWSLGICLY 243
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 139 RLYGFCHDQHMTALVY-EYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 139 RLYGFCHDQHMTALVY-EYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 139 RLYGFCHDQHMTALVY-EYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 203 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 131
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 190
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 191 KSSDLWALGCIIYQLVA 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 128
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 187
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 188 KSSDLWALGCIIYQLVA 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V +
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 214 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 130
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 189
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 190 KSSDLWALGCIIYQLVA 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 129
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 188
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 189 KSSDLWALGCIIYQLVA 205
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 150
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK-SAC 209
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 210 KSSDLWALGCIIYQLVA 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMA--EVGTIGRTYHINLVRLYG 142
LG GGFGEV Q G A K L + + + + MA E + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 143 FCHDQHMTALVYEYMENGSLDGYL-------FGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
+ LV M G L ++ F + RA+ + A GL LH E
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEICCGLEDLHRE 305
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV----TISGYKGTPGYSAPE 251
RI++ D+KPEN+LLD + +++D GLA HV TI G GT GY APE
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRVGTVGYMAPE 355
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVG------RRRNAIVGATESLDWFPKHVWEEY 301
+ N T D ++ G +L+E++ +R+ I E ++ K V EEY
Sbjct: 356 VVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEVPEEY 408
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 154
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK-SAC 213
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 214 KSSDLWALGCIIYQLVA 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ +V +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 249 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 280
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+++L LV++ M+ G L YL +K + ++ +I + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF- 252
+ I+H D+KPEN+LLD + + K+ DFG + D + ++ GTP Y APE
Sbjct: 142 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEII 195
Query: 253 ---LSGNYPITHK-CDVYSFGMVLFEIVG 277
++ N+P K D++S G++++ ++
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 104/236 (44%), Gaps = 39/236 (16%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMA--EVGTIGRTYHINLVRLYG 142
LG GGFGEV Q G A K L + + + + MA E + + +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 143 FCHDQHMTALVYEYMENGSLDGYL-------FGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
+ LV M G L ++ F + RA+ + A GL LH E
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEICCGLEDLHRE 305
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHV----TISGYKGTPGYSAPE 251
RI++ D+KPEN+LLD + +++D GLA HV TI G GT GY APE
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRVGTVGYMAPE 355
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVG------RRRNAIVGATESLDWFPKHVWEEY 301
+ N T D ++ G +L+E++ +R+ I E ++ K V EEY
Sbjct: 356 VVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEVPEEY 408
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 81 NYSTRLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
+ R+G G FGEV++ + G + AVK + + R+ E+ +A G +V
Sbjct: 77 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGL----SSPRIVP 130
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
LYG + + E +E GSL G L + + ++ +GL YLH +R
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRR 186
Query: 200 IIHYDIKPENVLLDANFS-PKVADFGLAKLCDR----NKTHVTISGYKGTPGYSAPEFLS 254
I+H D+K +NVLL ++ S + DFG A LC + K+ +T GT + APE +
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G P K D++S ++ ++
Sbjct: 246 GK-PCDAKVDIWSSCCMMLHML 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 81 NYSTRLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
+ R+G G FGEV++ + G + AVK + + R+ E+ +A G +V
Sbjct: 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGL----SSPRIVP 114
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
LYG + + E +E GSL G L + + ++ +GL YLH +R
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRR 170
Query: 200 IIHYDIKPENVLLDANFS-PKVADFGLAKLCDR----NKTHVTISGYKGTPGYSAPEFLS 254
I+H D+K +NVLL ++ S + DFG A LC + K+ +T GT + APE +
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G P K D++S ++ ++
Sbjct: 230 GK-PCDAKVDIWSSCCMMLHML 250
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 151
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 210
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 211 KSSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 135
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 194
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 195 KSSDLWALGCIIYQLVA 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGT-IGRTYHINLV 138
LG G FG+V + + +AVK+L M+E+ I +H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGK---------------KRAIEWEKLHEIA 182
L G C +V E+ + G+L YL K K + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK 242
AKG+ +L ++ IH D+ N+LL K+ DFGLA+ ++ V +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + T + DV+SFG++L+EI
Sbjct: 212 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEI 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--------GRIAEEQFM 123
++L +F N+ LG G FG+V + ++ AVK+L +++ + E++ +
Sbjct: 338 MKLTDF--NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 124 AEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI-- 181
A G L +L+ V EY+ G L ++ ++ +++ H +
Sbjct: 396 ALPGKPPF-----LTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFY 447
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY 241
A A GL +L + II+ D+K +NV+LD+ K+ADFG+ K + VT +
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXF 502
Query: 242 KGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
GTP Y APE ++ P D ++FG++L+E++
Sbjct: 503 CGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLA 537
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 158
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 217
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 218 KSSDLWALGCIIYQLVA 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 154
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 213
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 214 KSSDLWALGCIIYQLVA 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 151
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 210
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 211 KSSDLWALGCIIYQLVA 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNA 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIAV--KVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
++G G +G V+K + + +I K L + ++ + E+ + + H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 143 FCHDQHMTALVYEYMENG---SLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
+ LV+EY ++ LD Y +R + + I T + + + H +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCH---KHN 122
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
IH D+KPEN+L+ + K+ DFG A+L + T Y +PE L G+
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQY 180
Query: 260 THKCDVYSFGMVLFEIVG 277
DV++ G V E++
Sbjct: 181 GPPVDVWAIGCVFAELLS 198
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G +G VY G+ N V+IA+K + R ++ E+ H N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLGSF 88
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKL--HEIAIG-----TAKGLVYLHEECQ 197
+ + E + GSL L K W L +E IG +GL YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSK-----WGPLKDNEQTIGFYTKQILEGLKYLHD--- 140
Query: 198 QRIIHYDIKPENVLLDA-NFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLS- 254
+I+H DIK +NVL++ + K++DFG +K L N T + GT Y APE +
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET---FTGTLQYMAPEIIDK 197
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G D++S G + E+
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMA 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 150
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 209
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 210 KSSDLWALGCIIYQLVA 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 85 RLGFGGFGEVYKGQFPNGVKIA----VKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
++G G +G V+K + +I V++ + + G + E+ + H N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG--VPSSALREICLLKELKHKNIVRL 66
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ H LV+E+ + L Y ++ E + KGL + H + +
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKG---TPGYSAPEFLSGNY 257
+H D+KP+N+L++ N K+A+FGLA+ + + Y T Y P+ L G
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR-----AFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 258 PITHKCDVYSFGMVLFEIVGRRRNAIVG 285
+ D++S G + E+ R G
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPG 205
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGE-VYKGQFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 151
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 210
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 211 KSSDLWALGCIIYQLVA 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 153
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAX 212
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+++L LV++ M+ G L YL +K + ++ +I + + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 128
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF- 252
+ I+H D+KPEN+LLD + + K+ DFG + D + + GTP Y APE
Sbjct: 129 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 182
Query: 253 ---LSGNYPITHK-CDVYSFGMVLFEIVG 277
++ N+P K D++S G++++ ++
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 80 SNYSTRLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
+ + RLG G FGEV++ + G + AVK + + R E+ MA G +V
Sbjct: 95 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA--EELMACAGLTSP----RIV 148
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
LYG + + E +E GSL G L ++ + ++ +GL YLH +
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLH---SR 204
Query: 199 RIIHYDIKPENVLLDANFS-PKVADFGLAKLCDRN---KTHVTISGYKGTPGYSAPEFLS 254
RI+H D+K +NVLL ++ S + DFG A + K+ +T GT + APE +
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G K DV+S ++ ++
Sbjct: 265 GRS-CDAKVDVWSSCCMMLHML 285
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 52 GQTMER---FLQEIGR---EKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKG-QFPNGVK 104
G + ER + QE+ + E P R+ +L + +G G +G V G++
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNL----------SPVGSGAYGSVCAAFDTKTGLR 60
Query: 105 IAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLD 163
+AVK L+R I ++ E+ + H N++ L D A E + L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLV 116
Query: 164 GYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANF 216
+L G ++ +KL + + +GL Y+H IIH D+KP N+ ++ +
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDX 173
Query: 217 SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
K+ DFGLA+ D T GY T Y APE + D++S G ++ E++
Sbjct: 174 ELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 277 GRR 279
R
Sbjct: 229 TGR 231
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRN--LGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + Y+ + ++ A KV+ ++ L +E+ E+ + ++V +G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
F D +V E SL L +++A+ + T +G+ YLH R+IH
Sbjct: 94 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 149
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFL--SG 255
D+K N+ L+ + K+ DFGLA T + G + GTP Y APE L G
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + + D++S G +L+ ++
Sbjct: 203 H---SFEVDIWSLGCILYTLL 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 93 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 202
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRN--LGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + Y+ + ++ A KV+ ++ L +E+ E+ + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
F D +V E SL L +++A+ + T +G+ YLH R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFL--SG 255
D+K N+ L+ + K+ DFGLA T + G + GTP Y APE L G
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + + D++S G +L+ ++
Sbjct: 219 H---SFEVDIWSLGCILYTLL 236
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
D A E + L +L G K + + + + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 12/197 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQ----FMAEVGTIGRTYHINLVRL 140
LG G F V + + A+K+L + I +E E + R H V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
Y D Y +NG L Y+ K + + L YLH + I
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYLH---GKGI 156
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
IH D+KPEN+LL+ + ++ DFG AK+ + + GT Y +PE L+
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK-SAC 215
Query: 261 HKCDVYSFGMVLFEIVG 277
D+++ G +++++V
Sbjct: 216 KSSDLWALGCIIYQLVA 232
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--------GRIAEEQFM 123
++L +F N+ LG G FG+V + ++ AVK+L +++ + E++ +
Sbjct: 17 MKLTDF--NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 124 AEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEI-- 181
A G L +L+ V EY+ G L ++ ++ +++ H +
Sbjct: 75 ALPGKPPF-----LTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFY 126
Query: 182 AIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNK-THVTISG 240
A A GL +L + II+ D+K +NV+LD+ K+ADFG +C N VT
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFG---MCKENIWDGVTTKX 180
Query: 241 YKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
+ GTP Y APE ++ P D ++FG++L+E++
Sbjct: 181 FCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLA 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 52 GQTMER---FLQEIGR---EKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKG-QFPNGVK 104
G + ER + QE+ + E P R+ +L + +G G +G V G++
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNL----------SPVGSGAYGSVCAAFDTKTGLR 60
Query: 105 IAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLD 163
+AVK L+R I ++ E+ + H N++ L D A E + L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLV 116
Query: 164 GYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANF 216
+L G ++ +KL + + +GL Y+H IIH D+KP N+ ++ +
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDC 173
Query: 217 SPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
K+ DFGLA+ D T GY T Y APE + D++S G ++ E++
Sbjct: 174 ELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 228
Query: 277 GRR 279
R
Sbjct: 229 TGR 231
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRN--LGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + Y+ + ++ A KV+ ++ L +E+ E+ + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
F D +V E SL L +++A+ + T +G+ YLH R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFL--SG 255
D+K N+ L+ + K+ DFGLA T + G + GTP Y APE L G
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + + D++S G +L+ ++
Sbjct: 219 H---SFEVDIWSLGCILYTLL 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRN--LGRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + Y+ + ++ A KV+ ++ L +E+ E+ + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
F D +V E SL L +++A+ + T +G+ YLH R+IH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTIQGVQYLH---NNRVIH 165
Query: 203 YDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFL--SG 255
D+K N+ L+ + K+ DFGLA T + G + GTP Y APE L G
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 256 NYPITHKCDVYSFGMVLFEIV 276
+ + + D++S G +L+ ++
Sbjct: 219 H---SFEVDIWSLGCILYTLL 236
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTR------LGFGGFGEVYKG-QFPNGVKIAVKVLNRN 113
E+ +E+P F +LN R +G G +G V G+++AVK L+R
Sbjct: 6 EMSQERPT-FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 64
Query: 114 LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK--K 170
I ++ E+ + H N++ L D A E + L +L G
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 171 RAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGL 225
++ +KL + + +GL Y+H IIH D+KP N+ ++ + K+ DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 226 AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
A+ D T GY T Y APE + D++S G ++ E++ R
Sbjct: 178 ARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+++L LV++ M+ G L YL +K + ++ +I + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEF- 252
+ I+H D+KPEN+LLD + + K+ DFG + D + + GTP Y APE
Sbjct: 142 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 195
Query: 253 ---LSGNYPITHK-CDVYSFGMVLFEIVG 277
++ N+P K D++S G++++ ++
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
D A E + L +L G K + + + + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 86
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 144 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 197
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 94
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 152 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 205
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 115
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 226
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKIAVKVLNRN--LGRIAEEQFMAE--VG 127
L ++NF + LG G FG+V + G AVKVL ++ L E M E +
Sbjct: 20 LGIDNF--EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 128 TIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAK 187
++ R H L +L+ V E++ G L + K R + + A
Sbjct: 78 SLARN-HPFLTQLFCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFYAAEIIS 135
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK--LCDRNKTHVTISGYKGTP 245
L++LH+ + II+ D+K +NVLLD K+ADFG+ K +C+ VT + + GTP
Sbjct: 136 ALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN----GVTTATFCGTP 188
Query: 246 GYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
Y APE L D ++ G++L+E++
Sbjct: 189 DYIAPEILQ-EMLYGPAVDWWAMGVLLYEML 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTR------LGFGGFGEVYKG-QFPNGVKIAVKVLNRN 113
E+ +E+P F +LN R +G G +G V G+++AVK L+R
Sbjct: 6 EMSQERPT-FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 64
Query: 114 LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK--K 170
I ++ E+ + H N++ L D A E + L +L G
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 171 RAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGL 225
++ +KL + + +GL Y+H IIH D+KP N+ ++ + K+ DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGL 177
Query: 226 AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
A+ D T GY T Y APE + D++S G ++ E++ R
Sbjct: 178 ARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTR------LGFGGFGEVYKG-QFPNGVKIAVKVLNRN 113
E+ +E+P F +LN R +G G +G V G+++AVK L+R
Sbjct: 23 EMSQERPT-FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 81
Query: 114 LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK--K 170
I ++ E+ + H N++ L D A E + L +L G
Sbjct: 82 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 137
Query: 171 RAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGL 225
++ +KL + + +GL Y+H IIH D+KP N+ ++ + K+ DFGL
Sbjct: 138 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 226 AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
A+ D T GY T Y APE + D++S G ++ E++ R
Sbjct: 195 ARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 93 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 202
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 109
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 167 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 220
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 153 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 206
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 207 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 264
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 265 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 315
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 316 PELIS-RLPYGPEVDIWSLGIMVIEMV 341
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 120 EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEK 177
EQ E+ + + H N+V+L D + L V+E + G + K + + +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 178 LHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
+ + KG+ YLH Q+IIH DIKP N+L+ + K+ADFG++ + +
Sbjct: 141 FYFQDL--IKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EFKGSDAL 193
Query: 238 ISGYKGTPGYSAPEFLSGNYPI--THKCDVYSFGMVLFEIV 276
+S GTP + APE LS I DV++ G+ L+ V
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 31 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 84
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 142
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 143 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 193
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 194 PELIS-RLPYGPEVDIWSLGIMVIEMV 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 117
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 175 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 228
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 61 EIGREKPVRFTSLQLNNFTSNYSTR------LGFGGFGEVYKG-QFPNGVKIAVKVLNRN 113
E+ +E+P F +LN R +G G +G V G+++AVK L+R
Sbjct: 5 EMSQERPT-FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 63
Query: 114 LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK--K 170
I ++ E+ + H N++ L D A E + L +L G
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 119
Query: 171 RAIEWEKLHE-----IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGL 225
++ +KL + + +GL Y+H IIH D+KP N+ ++ + K+ DFGL
Sbjct: 120 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 176
Query: 226 AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
A+ D T GY T Y APE + D++S G ++ E++ R
Sbjct: 177 ARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINL-VRLYGF 143
LG G +G V K + P+G AVK + + +++ + ++ RT V YG
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 144 CHDQHMTALVYEYMENGSLDGY---LFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + E + + SLD + + K + I + L +IA+ K L +LH + +
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 158
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK--GTPGYSAPEFLSGNYP 258
IH D+KP NVL++A K DFG++ + +G K P PE Y
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYS 218
Query: 259 ITHKCDVYSFGMVLFEIVGRR 279
+ K D++S G+ E+ R
Sbjct: 219 V--KSDIWSLGITXIELAILR 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 119
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 177 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 230
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 93 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 202
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 86
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 87 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 141
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 196
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 95 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 204
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 77 NFTSNYSTR--LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
N +S++ + LG G +G V P G +A+K + + + + E+ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 134 HINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
H N++ ++ VY E D + + + + + T + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 192 LHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT--------ISGYKG 243
LH +IH D+KP N+L+++N KV DFGLA++ D + + + +
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T Y APE + + + DV+S G +L E+ RR
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 90 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 199
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 33 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 86
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 144
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 145 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 195
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 196 PELIS-RLPYGPEVDIWSLGIMVIEMV 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 90 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 199
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 100 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 209
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 90 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 199
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 100 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 209
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 160
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 218 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 271
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 22 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 133
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 134 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 184
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 185 PELIS-RLPYGPEVDIWSLGIMVIEMV 210
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 192
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 94 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 203
Query: 257 YPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLD 291
D++S G ++ E++ R + T+ +D
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHID 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G +G VY G+ N V+IA+K + R ++ E+ H N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLGSF 74
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKL--HEIAIG-----TAKGLVYLHEECQ 197
+ + E + GSL L K W L +E IG +GL YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSK-----WGPLKDNEQTIGFYTKQILEGLKYLHD--- 126
Query: 198 QRIIHYDIKPENVLLDA-NFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLS- 254
+I+H DIK +NVL++ + K++DFG +K L N T + GT Y APE +
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET---FTGTLQYMAPEIIDK 183
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G D++S G + E+
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMA 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 192
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 106
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 107 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 216
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 38/220 (17%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVL-----NRNLGRIAEEQFMAEVGTIGRTYHINLV 138
+LG G +G V+K G +AVK + N + + M G +NL+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEEC 196
+ +D+ + LV++YME L RA E +H+ + K + YLH
Sbjct: 76 NVLRADNDRDV-YLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT------------------- 237
++H D+KP N+LL+A KVADFGL++ N VT
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSR-SFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 238 -ISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
++ Y T Y APE L G+ T D++S G +L EI+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 84
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 85 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 194
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 90 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 199
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 84
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 85 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 194
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 108 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 217
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 77 NFTSNYSTR--LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY 133
N +S++ + LG G +G V P G +A+K + + + + E+ +
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 134 HINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
H N++ ++ VY E D + + + + + T + +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 192 LHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT--------ISGYKG 243
LH +IH D+KP N+L+++N KV DFGLA++ D + + ++
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T Y APE + + + DV+S G +L E+ RR
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 80 SNYSTRLGFGGFGEVYKGQFPN-GVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
+ + RLG G FGEV++ + G + AVK + + R E+ MA G +V
Sbjct: 76 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA--EELMACAGLTSP----RIV 129
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
LYG + + E +E GSL G L ++ + ++ +GL YLH +
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLH---SR 185
Query: 199 RIIHYDIKPENVLLDANFS-PKVADFGLAKLCDRN---KTHVTISGYKGTPGYSAPEFLS 254
RI+H D+K +NVLL ++ S + DFG A + K +T GT + APE +
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
G K DV+S ++ ++
Sbjct: 246 GRS-CDAKVDVWSSCCMMLHML 266
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 84 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 139
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 140 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 193
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 85
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 86 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 140
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 195
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ Y + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---YICSRYYRAPE 192
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
+ G T DV+S G VL E++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 26 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 137
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 138 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 188
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 189 PELIS-RLPYGPEVDIWSLGIMVIEMV 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 75 LNNFTSNYSTRLGFGGFGEVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY- 133
L+NF ++G G G V + K+ V V +L + + + I R Y
Sbjct: 76 LDNFI-----KIGEGSTGIVCIATVRSSGKL-VAVKKMDLRKQQRRELLFNEVVIMRDYQ 129
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H N+V +Y +V E++E G+L + + + E++ + + + L LH
Sbjct: 130 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 187
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFG----LAKLCDRNKTHVTISGYKGTPGYSA 249
Q +IH DIK +++LL + K++DFG ++K R K V GTP + A
Sbjct: 188 A---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMA 238
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE +S P + D++S G+++ E+V
Sbjct: 239 PELIS-RLPYGPEVDIWSLGIMVIEMV 264
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 29/236 (12%)
Query: 62 IGREKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQF------PNGVKIAVKVLNRNLG 115
I + K + + L+ + LG FG+VYKG +A+K L
Sbjct: 12 INQHKQAKLKEISLS--AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 116 RIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK------ 169
E+F E R H N+V L G ++++ Y +G L +L +
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 170 ---------KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKV 220
K A+E + A G+ YL ++H D+ NVL+ + K+
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKI 186
Query: 221 ADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHKCDVYSFGMVLFEI 275
+D GL + + + + APE + G + I D++S+G+VL+E+
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSI--DSDIWSYGVVLWEV 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 141
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLS 194
Query: 255 --GNYPITHKCDVYSFGMVLFEIV 276
G+ + + DV+S G +++ ++
Sbjct: 195 KKGH---SFEVDVWSIGCIMYTLL 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 159
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLS 212
Query: 255 --GNYPITHKCDVYSFGMVLFEIV 276
G+ + + DV+S G +++ ++
Sbjct: 213 KKGH---SFEVDVWSIGCIMYTLL 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 101 NGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGFCHDQHMTALVYEYMEN 159
+G ++AVK+++ L + + + I R Y H N+V +Y ++ E+++
Sbjct: 69 SGRQVAVKMMD--LRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126
Query: 160 GSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPK 219
G+L + + + E++ + + L YLH Q +IH DIK +++LL + K
Sbjct: 127 GALTDIV--SQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVK 181
Query: 220 VADFG----LAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEI 275
++DFG ++K + K V GTP + APE +S + T + D++S G+++ E+
Sbjct: 182 LSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSLYAT-EVDIWSLGIMVIEM 234
Query: 276 V 276
V
Sbjct: 235 V 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 137
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 255 --GNYPITHKCDVYSFGMVLFEIV 276
G+ + + DV+S G +++ ++
Sbjct: 191 KKGH---SFEVDVWSIGCIMYTLL 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 86 LGFGGFGEVY---KGQFPN-GVKIAVKVLNRNLGRIAEE-QFMAEVGTIGRTYHINLVRL 140
LG G FG+V+ K P+ G A+KVL + ++ + + E + H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + L+ +++ G L L K+ E + A GL +LH I
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLHSLG---I 151
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I+ D+KPEN+LLD K+ DFGL+K D K + + GT Y APE ++
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS---FCGTVEYMAPEVVN-RQGH 207
Query: 260 THKCDVYSFGMVLFEIV 276
+H D +S+G+++FE++
Sbjct: 208 SHSADWWSYGVLMFEML 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKV---LNRNLGRIAE------EQFMAEVGTIGRTYHIN 136
+G G +GEV KIAV+ + R +I + ++F E+ + H N
Sbjct: 17 IGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
++RLY D LV E G L + KR I + Y H
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCH--- 123
Query: 197 QQRIIHYDIKPENVLL--DANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
+ + H D+KPEN L D+ SP K+ DFGLA R K + GTP Y +P+ L
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTKVGTPYYVSPQVL 180
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
G Y +CD +S G++++ ++
Sbjct: 181 EGLY--GPECDEWSAGVMMYVLL 201
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 161
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 255 --GNYPITHKCDVYSFGMVLFEIV 276
G+ + + DV+S G +++ ++
Sbjct: 215 KKGH---SFEVDVWSIGCIMYTLL 235
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVKV---LNRNLGRIAE------EQFMAEVGTIGRTYHIN 136
+G G +GEV KIAV+ + R +I + ++F E+ + H N
Sbjct: 34 IGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
++RLY D LV E G L + KR I + Y H
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCH--- 140
Query: 197 QQRIIHYDIKPENVLL--DANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
+ + H D+KPEN L D+ SP K+ DFGLA R K + GTP Y +P+ L
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTKVGTPYYVSPQVL 197
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
G Y +CD +S G++++ ++
Sbjct: 198 EGLY--GPECDEWSAGVMMYVLL 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 86 LGFGGFGEV---YKGQFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G +G V Y + K+AVK L+R I + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHE 194
D A E L L G K +A+ E + + +GL Y+H
Sbjct: 94 ----DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
IIH D+KP NV ++ + ++ DFGLA+ D T GY T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIML 201
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
D++S G ++ E++
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELL 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 115
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 173 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 224
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 135
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
+ + DV+S G +++ ++
Sbjct: 189 KKGH-SFEVDVWSIGCIMYTLL 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 61 EIGREKPVRFTSLQ-LNNFTSNYSTRLGFGGFGEVYKG-QFPNGVKIAVKVLN-RNLGRI 117
++G E + F S++ NNF S LG G F V + G + A K L R G+
Sbjct: 12 DLGTEN-LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD 70
Query: 118 AEEQFMAEVGTIGRTYHI-NLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGK-KRAIEW 175
+ + E+ + ++ L+ + L+ EY G + + +
Sbjct: 71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE 130
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANF---SPKVADFGLAKLCDRN 232
+ + +G+ YLH Q I+H D+KP+N+LL + + K+ DFG++ R
Sbjct: 131 NDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS----RK 183
Query: 233 KTHVT-ISGYKGTPGYSAPEFLSGNY-PITHKCDVYSFGMVLFEIV 276
H + GTP Y APE L NY PIT D+++ G++ + ++
Sbjct: 184 IGHACELREIMGTPEYLAPEIL--NYDPITTATDMWNIGIIAYMLL 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHEEC 196
D A E + L +L G K + + + + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGL + D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 86 LGFGGFGEVYKGQFPNGVKI-AVKVLNRNL--GRIAEEQFMAEVGTIGRTYHINLVRLYG 142
LG GGF + ++ + ++ A K++ ++L E+ E+ H ++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEECQQR 199
F D +V E SL +K E E L +I +G YLH + R
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH---RNR 137
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFLS 254
+IH D+K N+ L+ + K+ DFGLA T V G + GTP Y APE LS
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEVLS 190
Query: 255 --GNYPITHKCDVYSFGMVLFEIV 276
G+ + + DV+S G +++ ++
Sbjct: 191 KKGH---SFEVDVWSIGCIMYTLL 211
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 95 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ T ++GY T Y APE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 93
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 202
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ D+GLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 100
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 158 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 209
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 110
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 111 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D + GY T Y APE +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNW 220
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 89
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 147 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 198
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 95 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ T ++GY T Y APE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L++ I ++ E+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 100 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 209
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 93
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 151 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 202
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 51/228 (22%)
Query: 73 LQLNNFTSNYSTRLGFGGFGEVYKGQFPNGVKI-AVKVLNRN-----------------L 114
++L +F N+ LG G FG+V ++ A+K+L ++ L
Sbjct: 16 VKLTDF--NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 115 GRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL-----FGK 169
+ + F+ ++ + +T + RLY V EY+ G L ++ F +
Sbjct: 74 ALLDKPPFLTQLHSCFQT----VDRLY----------FVMEYVNGGDLMYHIQQVGKFKE 119
Query: 170 KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLC 229
+A+ + EI+IG L +LH ++ II+ D+K +NV+LD+ K+ADFG+ K
Sbjct: 120 PQAVFYAA--EISIG----LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-- 168
Query: 230 DRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
+ VT + GTP Y APE ++ P D +++G++L+E++
Sbjct: 169 EHMMDGVTTREFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLA 215
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 95 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ T ++GY T Y APE +
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 82
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 191
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
LG G FG V++ + G K +N + + E+ + + +H L+ L+
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 145 HDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYD 204
D++ L+ E++ G L + + + ++ +GL ++HE I+H D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 205 IKPENVLLDAN--FSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
IKPEN++ + S K+ DFGLA KL VT + T ++APE + P+
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA----TAEFAAPEIVDRE-PVGF 229
Query: 262 KCDVYSFGMV 271
D+++ G++
Sbjct: 230 YTDMWAIGVL 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 27/212 (12%)
Query: 86 LGFGGFGEVYKGQF------PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
LG FG+VYKG +A+K L E+F E R H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 140 LYGFCHDQHMTALVYEYMENGSLDGYLFGK---------------KRAIEWEKLHEIAIG 184
L G ++++ Y +G L +L + K A+E +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 185 TAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGT 244
A G+ YL ++H D+ NVL+ + K++D GL + + +
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 245 PGYSAPE-FLSGNYPITHKCDVYSFGMVLFEI 275
+ APE + G + I D++S+G+VL+E+
Sbjct: 194 IRWMAPEAIMYGKFSI--DSDIWSYGVVLWEV 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 86 LGFGGFGEV---YKGQFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G +G V Y + K+AVK L+R I + E+ + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHE 194
D A E L L G K +A+ E + + +GL Y+H
Sbjct: 86 ----DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
IIH D+KP NV ++ + ++ DFGLA+ D T GY T Y APE +
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT-----GYVATRWYRAPEIML 193
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
D++S G ++ E++
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELL 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 85
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 194
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 97
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 98 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 152
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 207
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 94 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 203
Query: 257 YPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLD 291
D++S G ++ E++ R + T+ +D
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHID 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 86 LGFGGFGEV---YKGQFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLY 141
+G G +G V Y + K+AVK L+R I + E+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFG-------KKRAIEWEKLHEIAIGTAKGLVYLHE 194
D A E L L G K +A+ E + + +GL Y+H
Sbjct: 94 ----DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 195 ECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLS 254
IIH D+KP NV ++ + ++ DFGLA+ D T GY T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT-----GYVATRWYRAPEIML 201
Query: 255 GNYPITHKCDVYSFGMVLFEIV 276
D++S G ++ E++
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELL 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 108 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 217
Query: 257 YPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLD 291
D++S G ++ E++ R + T+ +D
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHID 250
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 106
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 107 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 216
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 19/258 (7%)
Query: 82 YSTRLGFGGFGEVYKG---------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT 132
++ LG G F +++KG Q + ++ +KVL++ R E F + +
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQL-HETEVLLKVLDK-AHRNYSESFFEAASMMSKL 69
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYL 192
H +LV YG C LV E+++ GSLD YL K I E+A A + +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 193 HEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISG--YKGTPGYSAP 250
E +IH ++ +N+LL K + KL D + + + + P
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 251 EFLSGNYPITHKCDVYSFGMVLFEIV--GRRRNAIVGATESLDWF-PKHVWEEYEKCELG 307
E + + D +SFG L+EI G + + + + L ++ +H + EL
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELA 246
Query: 308 AMILGCGIEEKDKEKAKR 325
+I C E D + R
Sbjct: 247 NLINNCMDYEPDHRPSFR 264
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 23/215 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 84 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 139
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 140 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 193
Query: 257 YPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLD 291
D++S G ++ E++ R + T+ +D
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHID 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 19/258 (7%)
Query: 82 YSTRLGFGGFGEVYKG---------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT 132
++ LG G F +++KG Q + ++ +KVL++ R E F + +
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQL-HETEVLLKVLDK-AHRNYSESFFEAASMMSKL 69
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYL 192
H +LV YG C LV E+++ GSLD YL K I E+A A + +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 193 HEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISG--YKGTPGYSAP 250
E +IH ++ +N+LL K + KL D + + + + P
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 251 EFLSGNYPITHKCDVYSFGMVLFEIV--GRRRNAIVGATESLDWF-PKHVWEEYEKCELG 307
E + + D +SFG L+EI G + + + + L ++ +H + EL
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELA 246
Query: 308 AMILGCGIEEKDKEKAKR 325
+I C E D + R
Sbjct: 247 NLINNCMDYEPDHRPSFR 264
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 65 EKPVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVK-VLN-----RNLGR 116
E +R +L+ S Y+ + + G +G V G G+ +A+K V N R +
Sbjct: 7 EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 117 IAE----EQFMAEVGTIGRTYHINLVRLYG-FCHDQ----HMTALVYEYMENGSLDGYLF 167
+++ ++ + E+ + +H N++ L F H + H LV E M L +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH 125
Query: 168 GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK 227
++ I + + GL LHE ++H D+ P N+LL N + DF LA+
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 228 --LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
D NKTH Y Y APE + T D++S G V+ E+ R+
Sbjct: 183 EDTADANKTH-----YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D+ LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG+G G V ++G F G +AVK + + IA + E+ + + H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 93
Query: 144 CHDQHMTALVYEYME--NGSLDGYLFGKKRAIEWEKLHE------IAIGTAKGLVYLHEE 195
C + +Y +E N +L + K + E KL + + A G+ +LH
Sbjct: 94 CSET-TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 196 CQQRIIHYDIKPENVLLDA-------------NFSPKVADFGLAKLCDRNKT--HVTISG 240
+IIH D+KP+N+L+ N ++DFGL K D + ++
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 241 YKGTPGYSAPEFL--SGNYPITHKCDVYSFGMVLFEIVGR 278
GT G+ APE L S +T D++S G V + I+ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 65 EKPVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKGQFPNGVKIAVK-VLN-----RNLGR 116
E +R +L+ S Y+ + + G +G V G G+ +A+K V N R +
Sbjct: 7 EAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI 66
Query: 117 IAE----EQFMAEVGTIGRTYHINLVRLYG-FCHDQ----HMTALVYEYMENGSLDGYLF 167
+++ ++ + E+ + +H N++ L F H + H LV E M L +
Sbjct: 67 LSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH 125
Query: 168 GKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK 227
++ I + + GL LHE ++H D+ P N+LL N + DF LA+
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 228 --LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
D NKTH Y Y APE + T D++S G V+ E+ R+
Sbjct: 183 EDTADANKTH-----YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 84 TRLGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
++G G FGEV+K + G K+A+K VL N + E+ + H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 142 GFCHDQHM--------TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
C + LV+++ E+ L G L ++ + GL Y+H
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCD--RNKTHVTISGYKGTPGYSAPE 251
+ +I+H D+K NVL+ + K+ADFGLA+ +N T Y PE
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVGRRR--------------NAIVGATESLDWFPKHV 297
L G D++ G ++ E+ R + + G+ W
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 259
Query: 298 WEEYEKCELGAMILGCGIEEKDKEKA 323
+E YEK EL + G + KD+ KA
Sbjct: 260 YELYEKLEL---VKGQKRKVKDRLKA 282
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 38/220 (17%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG+G G V ++G F G +AVK + + IA + E+ + + H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 93
Query: 144 CHDQHMTALVYEYME--NGSLDGYLFGKKRAIEWEKLHE------IAIGTAKGLVYLHEE 195
C + +Y +E N +L + K + E KL + + A G+ +LH
Sbjct: 94 CSET-TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 196 CQQRIIHYDIKPENVLLDA-------------NFSPKVADFGLAKLCDRNKT--HVTISG 240
+IIH D+KP+N+L+ N ++DFGL K D + ++
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 241 YKGTPGYSAPEFL--SGNYPITHKCDVYSFGMVLFEIVGR 278
GT G+ APE L S +T D++S G V + I+ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK 249
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHIN-LVRLYGF 143
+G G G+V+K +F G IAVK + R+ + ++ + ++ + +++ +V+ +G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKR---AIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ E M G+ L KKR I L ++ + K L YL E + +
Sbjct: 93 FITNTDVFIAMELM--GTCAEKL--KKRMQGPIPERILGKMTVAIVKALYYLKE--KHGV 146
Query: 201 IHYDIKPENVLLDANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
IH D+KP N+LLD K+ DFG++ +L D + G Y APE + P
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCAAYMAPERIDPPDPT 202
Query: 260 TH----KCDVYSFGMVLFEIV 276
+ DV+S G+ L E+
Sbjct: 203 KPDYDIRADVWSLGISLVELA 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 86 LGFGGFGE-VYKGQFPNGVKIAVKVLNRNLGRIA--EEQFMAEVGTIGRTYHINLVRLYG 142
LG G G VY+G F N +AVK + A E Q + E H N++R +
Sbjct: 32 LGHGAEGTIVYRGMFDNR-DVAVKRILPECFSFADREVQLLRESDE-----HPNVIRYFC 85
Query: 143 FCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIH 202
D+ + E + +L Y+ K A + + T GL +LH I+H
Sbjct: 86 TEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVH 141
Query: 203 YDIKPENVLLD-----ANFSPKVADFGLA-KLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
D+KP N+L+ ++DFGL KL + SG GT G+ APE LS +
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 257 YP--ITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPKHVWEEYEKCELGAMILGCG 314
T+ D++S G V + ++ +E F K + + LGA L C
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVI----------SEGSHPFGKSLQRQ-ANILLGACSLDCL 250
Query: 315 IEEKDKEKAKRLCMVALWCVQDSPEDRPPMSAVIK 349
EK ++ R + + + P+ RP V+K
Sbjct: 251 HPEKHEDVIARELIEKMIAM--DPQKRPSAKHVLK 283
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 84 TRLGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
++G G FGEV+K + G K+A+K VL N + E+ + H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 142 GFCHDQHM--------TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
C + LV+++ E+ L G L ++ + GL Y+H
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKL--CDRNKTHVTISGYKGTPGYSAPE 251
+ +I+H D+K NVL+ + K+ADFGLA+ +N T Y PE
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVGR 278
L G D++ G ++ E+ R
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 84 TRLGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
++G G FGEV+K + G K+A+K VL N + E+ + H N+V L
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 142 GFCHDQHM--------TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
C + LV+++ E+ L G L ++ + GL Y+H
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCD--RNKTHVTISGYKGTPGYSAPE 251
+ +I+H D+K NVL+ + K+ADFGLA+ +N T Y PE
Sbjct: 142 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVGRRR--------------NAIVGATESLDWFPKHV 297
L G D++ G ++ E+ R + + G+ W
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 258
Query: 298 WEEYEKCELGAMILGCGIEEKDKEKA 323
+E YEK EL + G + KD+ KA
Sbjct: 259 YELYEKLEL---VKGQKRKVKDRLKA 281
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 84 TRLGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLY 141
++G G FGEV+K + G K+A+K VL N + E+ + H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 142 GFCHDQHM--------TALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
C + LV+++ E+ L G L ++ + GL Y+H
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCD--RNKTHVTISGYKGTPGYSAPE 251
+ +I+H D+K NVL+ + K+ADFGLA+ +N T Y PE
Sbjct: 143 ---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIVGR 278
L G D++ G ++ E+ R
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T G T Y APE +
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GXVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 33/207 (15%)
Query: 86 LGFGGFGEVYKGQF-PNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG VY+ + +G +A+K VL + E Q M ++ H N+VRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCNIVRLRYF 81
Query: 144 CH------DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTA-----KGLVYL 192
+ D LV +Y+ Y + + + L I + + L Y+
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 193 HEECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVT--ISGYKGTPGYSA 249
H I H DIKP+N+LLD + + K+ DFG AK R + +V+ S Y Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 250 PEFLSGNYPITHKCDVYSFGMVLFEIV 276
PE + G T DV+S G VL E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ KL + + +GL Y+H
Sbjct: 84 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 193
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 84 TRLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLY 141
T +G G +G V +G K+A+K L+R I ++ E+ + H N++ L
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEW--EKLHEIAIGTAKGLVYLHEECQQR 199
Y++ K +E+ EK+ + KGL Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG--- 164
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
++H D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILSWMHY 219
Query: 260 THKCDVYSFGMVLFEIV 276
D++S G ++ E++
Sbjct: 220 NQTVDIWSVGCIMAEML 236
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ D GLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ FGLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 42/224 (18%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG+G G V ++G F G +AVK + + IA + E+ + + H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 75
Query: 144 CHDQHMTALVYEYME--NGSLDGYLFGKKRAIEWEKLHE------IAIGTAKGLVYLHEE 195
C + +Y +E N +L + K + E KL + + A G+ +LH
Sbjct: 76 CSET-TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132
Query: 196 CQQRIIHYDIKPENVLLDA-------------NFSPKVADFGLAKLCDRNKT--HVTISG 240
+IIH D+KP+N+L+ N ++DFGL K D ++ ++
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 241 YKGTPGYSAPEFL--SGNYP----ITHKCDVYSFGMVLFEIVGR 278
GT G+ APE L S N +T D++S G V + I+ +
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ D GLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D ++G+ T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D ++G+ T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G+++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ D GLA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 84 TRLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLY 141
T +G G +G V +G K+A+K L+R I ++ E+ + H N++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 142 GF------CHDQHMTALVYEYMENG--SLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
+ + LV +M+ + G F + EK+ + KGL Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE------EKIQYLVYQMLKGLKYIH 143
Query: 194 EECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
++H D+KP N+ ++ + K+ DFGLA+ D T GY T Y APE +
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVI 195
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
D++S G ++ E++
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEML 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 84 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D ++G+ T Y APE +
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 193
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG- 142
+G G +G V G K+A+K L R + ++ E+ + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 143 FCHDQHMTA-----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
F D+ + LV +M G+ G L ++ E +++ + KGL Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGE-DRIQFLVYQMLKGLRYIHAAG- 148
Query: 198 QRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNY 257
IIH D+KP N+ ++ + K+ DFGLA+ D + G T Y APE +
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVILNWM 201
Query: 258 PITHKCDVYSFGMVLFEIV 276
T D++S G ++ E++
Sbjct: 202 RYTQTVDIWSVGCIMAEMI 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 78 FTSNYSTR--LGFGGFGE----VYKGQFPNGVKIAVKVLNRNLGRIAEE-QFMAEVGTIG 130
F+ Y + +G G + E V+K ++ AVKV++++ +EE + + G
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIEILLRYGQ-- 79
Query: 131 RTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAK 187
H N++ L D LV E M G L + +K E E LH I K
Sbjct: 80 ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG----K 132
Query: 188 GLVYLHEECQQRIIHYDIKPENVL-LDANFSP---KVADFGLAKLCDRNKTHVTISGYKG 243
+ YLH Q ++H D+KP N+L +D + +P ++ DFG AK + Y
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-- 187
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
T + APE L CD++S G++L+ ++
Sbjct: 188 TANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLA 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 14/197 (7%)
Query: 81 NYSTRLGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLV 138
++ +G G FG + + + + +AVK + R G +E E+ H N+V
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIER--GAAIDENVQREIINHRSLRHPNIV 79
Query: 139 RLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQ 198
R A++ EY G L + R E E G+ Y H
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ-QLLSGVSYCH---SM 135
Query: 199 RIIHYDIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
+I H D+K EN LLD + +P K+ DFG +K + H GTP Y APE L
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 257 YPITHKCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 193 EYDGKIADVWSCGVTLY 209
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 78 FTSNYSTR--LGFGGFGE----VYKGQFPNGVKIAVKVLNRNLGRIAEE-QFMAEVGTIG 130
F+ Y + +G G + E V+K ++ AVKV++++ +EE + + G
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIEILLRYGQ-- 79
Query: 131 RTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAK 187
H N++ L D LV E M G L + +K E E LH I K
Sbjct: 80 ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG----K 132
Query: 188 GLVYLHEECQQRIIHYDIKPENVL-LDANFSP---KVADFGLAKLCDRNKTHVTISGYKG 243
+ YLH Q ++H D+KP N+L +D + +P ++ DFG AK + Y
Sbjct: 133 TVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-- 187
Query: 244 TPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
T + APE L CD++S G++L+ ++
Sbjct: 188 TANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLA 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 86 LGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG + + + N + +AVK + R G +E E+ H N+VR
Sbjct: 27 IGAGNFGVARLMRDKQANEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
A+V EY G L + R E E G+ Y H ++ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYAH---AMQVAHR 139
Query: 204 DIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN LLD + +P K+ADFG +K + H GTP Y APE L
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 262 KCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 197 VADVWSCGVTLY 208
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F +G G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTIGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EYM G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D KVADFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F +G G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTIGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EYM G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D KVADFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 84 TRLGFGGFGEVYKGQFP-NGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRT-YHINLVRL 140
+RLG G +GEV+K + +G AVK ++ G + +AEVG+ + H VRL
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + L E + SL + ++ ++ T L +LH Q +
Sbjct: 123 EQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGL 178
Query: 201 IHYDIKPENVLLDANFSPKVADFG-LAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+H D+KP N+ L K+ DFG L +L V +G P Y APE L G+Y
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ----EGDPRYMAPELLQGSYGT 234
Query: 260 THKCDVYSFGMVLFEIV 276
DV+S G+ + E+
Sbjct: 235 A--ADVFSLGLTILEVA 249
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLN----RNLGRIAEEQFMAEVGTIGRTYHINLVRL 140
+G G F V + G + AVK+++ + ++ E E H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 141 YGFCHDQHMTALVYEYMENGSL---------DGYLFGKKRAIEWEKLHEIAIGTAKGLVY 191
M +V+E+M+ L G+++ + A + + + L Y
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR------QILEALRY 145
Query: 192 LHEECQQRIIHYDIKPENVLLDA--NFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYS 248
H+ IIH D+KPENVLL + N +P K+ DFG+A ++ + G GTP +
Sbjct: 146 CHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFM 200
Query: 249 APEFLSGNYPITHKCDVYSFGMVLF 273
APE + P DV+ G++LF
Sbjct: 201 APEVVKRE-PYGKPVDVWGCGVILF 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY-HINLVRLYGF 143
LG+G G V ++G F G +AVK + + IA + E+ + + H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 75
Query: 144 CHDQHMTALVYEYME--NGSLDGYLFGKKRAIEWEKLHE------IAIGTAKGLVYLHEE 195
C + +Y +E N +L + K + E KL + + A G+ +LH
Sbjct: 76 CSET-TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132
Query: 196 CQQRIIHYDIKPENVLLDA-------------NFSPKVADFGLAKLCDRNKT--HVTISG 240
+IIH D+KP+N+L+ N ++DFGL K D + ++
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 241 YKGTPGYSAPEFL--SGNYP----ITHKCDVYSFGMVLFEIVGR 278
GT G+ APE L S N +T D++S G V + I+ +
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 86 LGFGGFGEVYK----GQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTY--HIN--- 136
LG G +G+V+ G A+KVL + I ++ E R HI
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKK--ATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 137 -LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEE 195
LV L+ + L+ +Y+ G L +L ++R E HE+ I + ++ L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIVLALEHL 175
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSG 255
+ II+ DIK EN+LLD+N + DFGL+K ++T + GT Y AP+ + G
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDIVRG 234
Query: 256 NYPITHKC-DVYSFGMVLFEIV 276
K D +S G++++E++
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELL 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKI----AVKVLNRNLGRIAEE-QFMAEVGTIGRTYHINLVRL 140
LG G FG+V+ + +G A+KVL + ++ + + E + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + L+ +++ G L L K+ E + A L +LH I
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLG---I 147
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I+ D+KPEN+LLD K+ DFGL+K D K + + GT Y APE ++
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGTVEYMAPEVVN-RRGH 203
Query: 260 THKCDVYSFGMVLFEIV 276
T D +SFG+++FE++
Sbjct: 204 TQSADWWSFGVLMFEML 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKI----AVKVLNRNLGRIAEE-QFMAEVGTIGRTYHINLVRL 140
LG G FG+V+ + +G A+KVL + ++ + + E + H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + L+ +++ G L L K+ E + A L +LH I
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLG---I 148
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I+ D+KPEN+LLD K+ DFGL+K D K + + GT Y APE ++
Sbjct: 149 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGTVEYMAPEVVN-RRGH 204
Query: 260 THKCDVYSFGMVLFEIV 276
T D +SFG+++FE++
Sbjct: 205 TQSADWWSFGVLMFEML 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 86 LGFGGFGEVYKGQFPNGVKI----AVKVLNRNLGRIAEE-QFMAEVGTIGRTYHINLVRL 140
LG G FG+V+ + +G A+KVL + ++ + + E + H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRI 200
+ + L+ +++ G L L K+ E + A L +LH I
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLG---I 147
Query: 201 IHYDIKPENVLLDANFSPKVADFGLAK-LCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
I+ D+KPEN+LLD K+ DFGL+K D K + + GT Y APE ++
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS---FCGTVEYMAPEVVN-RRGH 203
Query: 260 THKCDVYSFGMVLFEIV 276
T D +SFG+++FE++
Sbjct: 204 TQSADWWSFGVLMFEML 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 88 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DF LA+ D T GY T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT-----GYVATRWYRAPEIMLNW 197
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G G VY G ++A++ +N + +E + E+ + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 144 CHDQHMTA----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
D ++ +V EY+ GSL + + ++ ++ + + L +LH +
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 200 IIHYDIKPENVLLDANFSPKVADFGL-AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYP 258
+IH DIK +N+LL + S K+ DFG A++ T+ GTP + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVT-RKA 192
Query: 259 ITHKCDVYSFGMVLFEIV 276
K D++S G++ E++
Sbjct: 193 YGPKVDIWSLGIMAIEMI 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 86 LGFGGFGEVYKGQFPNGVK----IAVKVLN-----RNLGRIAEEQFMAEVGTIGRTYHIN 136
LG GG+G+V++ + G A+KVL RN A + AE + H
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK--AERNILEEVKHPF 82
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK-----LHEIAIGTAKGLVY 191
+V L L+ EY+ G L ++ ++ I E L EI++ L +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMA----LGH 136
Query: 192 LHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK--LCDRNKTHVTISGYKGTPGYSA 249
LH Q+ II+ D+KPEN++L+ K+ DFGL K + D TH + GT Y A
Sbjct: 137 LH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT----FCGTIEYMA 189
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLFEIV 276
PE L SG+ D +S G ++++++
Sbjct: 190 PEILMRSGH---NRAVDWWSLGALMYDML 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 14/192 (7%)
Query: 86 LGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG + + + N + +AVK + R G +E E+ H N+VR
Sbjct: 26 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
A+V EY G L + R E E G+ Y H ++ H
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCH---AMQVCHR 138
Query: 204 DIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN LLD + +P K+ DFG +K + H GTP Y APE L
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 262 KCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 196 VADVWSCGVTLY 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G G VY G ++A++ +N + +E + E+ + + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYL-- 84
Query: 144 CHDQHMTA----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
D ++ +V EY+ GSL + + ++ ++ + + L +LH +
Sbjct: 85 --DSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+IH DIK +N+LL + S K+ DFG ++ S GTP + APE ++
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVT-RKAY 194
Query: 260 THKCDVYSFGMVLFEIV 276
K D++S G++ E++
Sbjct: 195 GPKVDIWSLGIMAIEMI 211
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEV---GTIGRTYHINLVR 139
++G G FG V+K + +G A+K + L G + E+ + EV +G+ H+ VR
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 71
Query: 140 LY-GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEE 195
+ + D HM + EY GSL + R + + K L ++ + +GL Y+H
Sbjct: 72 YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 128
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVA-------DFGLAKLCDR--NKTHVT-ISGYK--- 242
++H DIKP N+ + P A D+ K+ + + HVT IS +
Sbjct: 129 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 187
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
G + A E L NY K D+++ + + G
Sbjct: 188 GDSRFLANEVLQENYTHLPKADIFALALTVVXAAG 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRN--LGRIA---------EEQFMAEVGTIGRTY 133
LG GGFG V+ G + + +++A+KV+ RN LG E + +VG G
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG-- 96
Query: 134 HINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLH 193
H ++RL + Q LV E D + + ++ E G +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQ-DLFDYITEKGPLGEGPSRCFFGQVVAAI--- 152
Query: 194 EECQQR-IIHYDIKPENVLLDANFS-PKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE 251
+ C R ++H DIK EN+L+D K+ DFG L + + GT YS PE
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPE 208
Query: 252 FLSGNYPITHKCDVYSFGMVLFEIV 276
++S + V+S G++L+++V
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMV 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 86 LGFGGFGEVYKGQFPNGVK----IAVKVLN-----RNLGRIAEEQFMAEVGTIGRTYHIN 136
LG GG+G+V++ + G A+KVL RN A + AE + H
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK--AERNILEEVKHPF 82
Query: 137 LVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK-----LHEIAIGTAKGLVY 191
+V L L+ EY+ G L ++ ++ I E L EI++ L +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMA----LGH 136
Query: 192 LHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAK--LCDRNKTHVTISGYKGTPGYSA 249
LH Q+ II+ D+KPEN++L+ K+ DFGL K + D TH + GT Y A
Sbjct: 137 LH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX----FCGTIEYMA 189
Query: 250 PEFL--SGNYPITHKCDVYSFGMVLFEIV 276
PE L SG+ D +S G ++++++
Sbjct: 190 PEILMRSGH---NRAVDWWSLGALMYDML 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G G VY G ++A++ +N + +E + E+ + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 144 CHDQHMTA----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
D ++ +V EY+ GSL + + ++ ++ + + L +LH +
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+IH DIK +N+LL + S K+ DFG ++ S GTP + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVT-RKAY 193
Query: 260 THKCDVYSFGMVLFEIV 276
K D++S G++ E++
Sbjct: 194 GPKVDIWSLGIMAIEMI 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAE-EQFMAEVGTIGRTYHINLVRLYGF 143
+G G +G V G ++AVK L+R I ++ E+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGK--KRAIEWEKLHE-----IAIGTAKGLVYLHEEC 196
D A E + L +L G ++ +KL + + +GL Y+H
Sbjct: 108 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 197 QQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGN 256
IIH D+KP N+ ++ + K+ DFGLA+ D + G T Y APE +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNW 217
Query: 257 YPITHKCDVYSFGMVLFEIVGRR 279
D++S G ++ E++ R
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G G VY G ++A++ +N + +E + E+ + + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 144 CHDQHMTA----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
D ++ +V EY+ GSL + + ++ ++ + + L +LH +
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 200 IIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPI 259
+IH DIK +N+LL + S K+ DFG ++ S GTP + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVT-RKAY 193
Query: 260 THKCDVYSFGMVLFEIV 276
K D++S G++ E++
Sbjct: 194 GPKVDIWSLGIMAIEMI 210
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 142 GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRII 201
GF D+ ++ + E DG+ K I E L + A+G+ +L ++ I
Sbjct: 172 GFQEDKSLS----DVEEEEDSDGFY---KEPITMEDLISYSFQVARGMEFLS---SRKCI 221
Query: 202 HYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
H D+ N+LL N K+ DFGLA+ +N +V + + APE + T
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST- 280
Query: 262 KCDVYSFGMVLFEI 275
K DV+S+G++L+EI
Sbjct: 281 KSDVWSYGVLLWEI 294
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 86 LGFGGFGEVYKG------QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRT-YHINLV 138
LG G FG+V + + P +AVK+L + M E+ + +H+N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 139 RLYGFCHDQHMTALV-YEYMENGSLDGYLFGKK 170
L G C Q +V EY + G+L YL K+
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 29/253 (11%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN-LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQ 147
FG V G A+K+L++ + ++ E E + E + LV+L D
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 148 HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHYDI 205
+V EY G + +L +R + + H A YLH +I+ D+
Sbjct: 114 SNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDL 167
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHKCD 264
KPEN+++D KV DFGLAK + GTP Y APE LS Y D
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKAVD 220
Query: 265 VYSFGMVLFEIVG 277
++ G++++E+
Sbjct: 221 WWALGVLIYEMAA 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F +G G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTIGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D KVADFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKA---KEDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEV---GTIGRTYHINLVR 139
++G G FG V+K + +G A+K + L G + E+ + EV +G+ H+ VR
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 73
Query: 140 LY-GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEE 195
+ + D HM + EY GSL + R + + K L ++ + +GL Y+H
Sbjct: 74 YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 130
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVA-------DFGLAKLCDR--NKTHVT-ISGYK--- 242
++H DIKP N+ + P A D+ K+ + + HVT IS +
Sbjct: 131 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
G + A E L NY K D+++ + + G
Sbjct: 190 GDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 224
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----XGTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEV---GTIGRTYHINLVR 139
++G G FG V+K + +G A+K + L G + E+ + EV +G+ H+ VR
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 73
Query: 140 LY-GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEE 195
+ + D HM + EY GSL + R + + K L ++ + +GL Y+H
Sbjct: 74 YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 130
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVA-------DFGLAKLCDR--NKTHVT-ISGYK--- 242
++H DIKP N+ + P A D+ K+ + + HVT IS +
Sbjct: 131 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
G + A E L NY K D+++ + + G
Sbjct: 190 GDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 118 AEEQFMAEVGTIGRTYHINLVRLYGFCHDQHMTAL--VYEYMENGSLDGYLFGKKRAIEW 175
E E+ + R H N+++L +++ + V EY G + ++
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 176 EKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTH 235
+ H GL YLH Q I+H DIKP N+LL + K++ G+A+
Sbjct: 109 CQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 236 VTISGYKGTPGYSAPEFLSGNYPIT-HKCDVYSFGMVLFEIV 276
T +G+P + PE +G + K D++S G+ L+ I
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 20/226 (8%)
Query: 59 LQEIGREKPVRFTSLQLNNFTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLG 115
+Q +G V+ FT Y + +G G + + ++ AVK+++++
Sbjct: 1 MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR 60
Query: 116 RIAEE-QFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIE 174
EE + + G H N++ L D +V E M+ G L + +K E
Sbjct: 61 DPTEEIEILLRYGQ-----HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE 115
Query: 175 WEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVL-LDANFSP---KVADFGLAKLCD 230
E + K + YLH Q ++H D+KP N+L +D + +P ++ DFG AK
Sbjct: 116 REA-SAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 231 RNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
+ Y T + APE L CD++S G++L+ ++
Sbjct: 172 AENGLLMTPCY--TANFVAPEVLE-RQGYDAACDIWSLGVLLYTML 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFAEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNL-GRIAEEQFMAEV---GTIGRTYHINLVR 139
++G G FG V+K + +G A+K + L G + E+ + EV +G+ H+ VR
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV--VR 75
Query: 140 LY-GFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEK---LHEIAIGTAKGLVYLHEE 195
+ + D HM + EY GSL + R + + K L ++ + +GL Y+H
Sbjct: 76 YFSAWAEDDHML-IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-- 132
Query: 196 CQQRIIHYDIKPENVLLDANFSPKVA-------DFGLAKLCDR--NKTHVT-ISGYK--- 242
++H DIKP N+ + P A D+ K+ + + HVT IS +
Sbjct: 133 -SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 191
Query: 243 GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVG 277
G + A E L NY K D+++ + + G
Sbjct: 192 GDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 226
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 85 RLGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
++G G G VY G ++A++ +N + +E + E+ + + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQ-QQPKKELIINEILVMRENKNPNIVNYL-- 84
Query: 144 CHDQHMTA----LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQR 199
D ++ +V EY+ GSL + + ++ ++ + + L +LH +
Sbjct: 85 --DSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 200 IIHYDIKPENVLLDANFSPKVADFGL-AKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYP 258
+IH +IK +N+LL + S K+ DFG A++ T+ GTP + APE ++
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVT-RKA 193
Query: 259 ITHKCDVYSFGMVLFEIV 276
K D++S G++ E++
Sbjct: 194 YGPKVDIWSLGIMAIEMI 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 23 NAAAAKKGSEQESVKEFLAKA---KEDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 74
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 186
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 239
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 240 VDWWALGVLIYEMAA 254
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENL 192
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 193 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 248
Query: 268 FGMVLF 273
G++++
Sbjct: 249 LGVIMY 254
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 198
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 199 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 254
Query: 268 FGMVLF 273
G++++
Sbjct: 255 LGVIMY 260
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENL 152
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 153 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 208
Query: 268 FGMVLF 273
G++++
Sbjct: 209 LGVIMY 214
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENL 153
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 154 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 209
Query: 268 FGMVLF 273
G++++
Sbjct: 210 LGVIMY 215
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 29/253 (11%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN-LGRIAE-EQFMAEVGTIGRTYHINLVRLYGFCHDQ 147
FG V G A+K+L++ + ++ E E + E + LV+L D
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113
Query: 148 HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHYDI 205
+V EY G + +L +R + + H A YLH +I+ D+
Sbjct: 114 SNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDL 167
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHKCD 264
KPEN+++D +V DFGLAK + GTP Y APE LS Y D
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKAVD 220
Query: 265 VYSFGMVLFEIVG 277
++ G++++E+
Sbjct: 221 WWALGVLIYEMAA 233
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 202
Query: 268 FGMVLF 273
G++++
Sbjct: 203 LGVIMY 208
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 86 LGFGGFGEVYKGQFPNGVKIAVK-VLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGFC 144
+G G FG V++ + ++A+K VL + E Q M V H N+V L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVK------HPNVVDLKAFF 101
Query: 145 H------DQHMTALVYEYM-ENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEEC 196
+ D+ LV EY+ E + K K+ + + + L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 197 QQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTI--SGYKGTPGYSAPEFL 253
I H DIKP+N+LLD K+ DFG AK+ + +V+ S Y Y APE +
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPELI 213
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
G T D++S G V+ E++
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELM 236
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENL 154
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 155 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 210
Query: 268 FGMVLF 273
G++++
Sbjct: 211 LGVIMY 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 23 NAAAAKKGSEQESVKEFLAKA---KEDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 74
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 75 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 186
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-----GTPEYLAPEIILSKGY--NKA 239
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 240 VDWWALGVLIYEMAA 254
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 147
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 148 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 203
Query: 268 FGMVLF 273
G++++
Sbjct: 204 LGVIMY 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 204
Query: 268 FGMVLF 273
G++++
Sbjct: 205 LGVIMY 210
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 149 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 204
Query: 268 FGMVLF 273
G++++
Sbjct: 205 LGVIMY 210
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 113/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTLC----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENL 162
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 163 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 218
Query: 268 FGMVLF 273
G++++
Sbjct: 219 LGVIMY 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD++S
Sbjct: 147 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVL-GPEKYDKSCDMWS 202
Query: 268 FGMVLF 273
G++++
Sbjct: 203 LGVIMY 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++++
Sbjct: 219 VDWWALGVLIYQMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAACKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 113/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 29/253 (11%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F + LG G
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ESPAQNTA-HLDQFERIRT--LGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN-LGRIAEEQFMAEVGTIGRTYHIN-LVRLYGFCHDQ 147
FG V + G A+K+L++ + ++ + + I + + LV+L D
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDN 114
Query: 148 HMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHYDI 205
+V EY G + +L +R + + H A YLH +I+ D+
Sbjct: 115 SNLYMVLEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDL 168
Query: 206 KPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHKCD 264
KPEN+L+D KVADFG AK + GTP Y APE LS Y D
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKAVD 221
Query: 265 VYSFGMVLFEIVG 277
++ G++++E+
Sbjct: 222 WWALGVLIYEMAA 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 73
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E ME D + F +R E+L V
Sbjct: 74 -GVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 132 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 185
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 113/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 46/229 (20%)
Query: 85 RLGFGGFGEVY--KGQFPNGV--KIAVKVL--NRNLGRIAEE-QFMAEVGTIGRTYHINL 137
++G G F VY Q G KIA+K L + RIA E Q + G +
Sbjct: 28 KIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK- 86
Query: 138 VRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQ 197
Y F + H+ + Y+E+ S L ++ ++++ E + K L +H Q
Sbjct: 87 ---YCFRKNDHVV-IAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRIH---Q 135
Query: 198 QRIIHYDIKPENVLLDANFSP-KVADFGLAK--------------------LCDRNKTHV 236
I+H D+KP N L + + DFGLA+ C +NK +
Sbjct: 136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSI 195
Query: 237 TISGYK------GTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
+S + GTPG+ APE L+ T D++S G++ ++ R
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 102 GVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG-FCHDQHMTALVYEYMEN 159
G+ +AVK L+R + ++ E+ + H N++ L F + + Y+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 160 GSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSP 218
+D L ++ E++ + G+ +LH IIH D+KP N+++ ++ +
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 163
Query: 219 KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
K+ DFGLA+ T+ ++ Y T Y APE + G D++S G ++ E+V
Sbjct: 164 KILDFGLARTA---STNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELV-- 217
Query: 279 RRNAIVGATESLDWFPK 295
+ + I T+ +D + K
Sbjct: 218 KGSVIFQGTDHIDQWNK 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 171 RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSP------KVADFG 224
R I + +I+ GL Y+H C IIH DIKPENVL++ SP K+AD G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 225 LAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
A D + T+ T Y +PE L G P D++S ++FE++
Sbjct: 184 NACWYDEHYTNSI-----QTREYRSPEVLLGA-PWGCGADIWSTACLIFELI 229
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKETGNHFAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 171 RAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSP------KVADFG 224
R I + +I+ GL Y+H C IIH DIKPENVL++ SP K+AD G
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLG 183
Query: 225 LAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
A D + T+ T Y +PE L G P D++S ++FE++
Sbjct: 184 NACWYDEHYTNSI-----QTREYRSPEVLLGA-PWGCGADIWSTACLIFELI 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 86 LGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG + + + N + +AVK + R G +E E+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
A+V EY G L + R E E G+ Y H ++ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCH---AMQVCHR 139
Query: 204 DIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN LLD + +P K+ FG +K + H GTP Y APE L
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 KCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 197 VADVWSCGVTLY 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 78/192 (40%), Gaps = 14/192 (7%)
Query: 86 LGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG + + + N + +AVK + R G E+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIAANVKREIINHRSLRHPNIVRFKEV 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
A+V EY G L + R E E G+ Y H ++ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCH---AMQVCHR 139
Query: 204 DIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN LLD + +P K+ DFG +K + H GTP Y APE L
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 KCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 197 VADVWSCGVTLY 208
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKA---KEDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D +V DFG AK + +T GTP Y APE +S Y
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIIISKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ESPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 86 LGFGGFG--EVYKGQFPNGVKIAVKVLNRNLGRIAEEQFMAEVGTIGRTYHINLVRLYGF 143
+G G FG + + + N + +AVK + R G +E E+ H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 144 CHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
A+V EY G L + R E E G+ Y H ++ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCH---AMQVCHR 139
Query: 204 DIKPENVLLDANFSP--KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITH 261
D+K EN LLD + +P K+ FG +K + H GTP Y APE L
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 262 KCDVYSFGMVLF 273
DV+S G+ L+
Sbjct: 197 VADVWSCGVTLY 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ESPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP Y AP LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPAIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ESPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F + LG G
Sbjct: 23 NAAAAKKGSEQESVKEFLAKA---KEDFLKKW--ESPAQNTA-HLDQFERIKT--LGTGS 74
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 75 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 186
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 239
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 240 VDWWALGVLIYEMAA 254
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ESPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 55 FGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 152 LVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENV 210
+V E ++ G L + + +A + EI + + YLH I H D+KPEN+
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPENL 192
Query: 211 LLDA---NFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYS 267
L + N K+ DFG AK +H +++ TP Y APE L G CD +S
Sbjct: 193 LYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDXWS 248
Query: 268 FGMVLF 273
G++ +
Sbjct: 249 LGVIXY 254
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 152 LVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVL 211
LV+E M GS+ ++ ++ E E + A L +LH + I H D+KPEN+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEA-SVVVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 212 LD--ANFSP-KVADFGLAKLCDRNKTHVTISGYK-----GTPGYSAPEFL---SGNYPIT 260
+ SP K+ DFGL N IS + G+ Y APE + S I
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 261 HK-CDVYSFGMVLF 273
K CD++S G++L+
Sbjct: 204 DKRCDLWSLGVILY 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 110/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 53
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D +V DFG AK + GTP Y APE LS Y
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 102 GVKIAVKVLNRNL-GRIAEEQFMAEVGTIGRTYHINLVRLYG-FCHDQHMTALVYEYMEN 159
G+ +AVK L+R + ++ E+ + H N++ L F + + Y+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 160 GSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSP 218
+D L ++ E++ + G+ +LH IIH D+KP N+++ ++ +
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 219 KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGR 278
K+ DFGLA+ T+ ++ Y T Y APE + G D++S G ++ E+V
Sbjct: 166 KILDFGLARTA---CTNFMMTPYVVTRYYRAPEVILG-MGYAANVDIWSVGCIMGELV-- 219
Query: 279 RRNAIVGATESLDWFPK 295
+ I T+ +D + K
Sbjct: 220 KGCVIFQGTDHIDQWNK 236
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + L +L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + +T GTP Y APE LS Y
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 145 HDQHMTALVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
H + ++ E ME G L + + +A + EI + +LH I H
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR 133
Query: 204 DIKPENVLL---DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
D+KPEN+L + + K+ DFG AK +N TP Y APE L G
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVL-GPEKYD 188
Query: 261 HKCDVYSFGMVLF 273
CD++S G++++
Sbjct: 189 KSCDMWSLGVIMY 201
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 145 HDQHMTALVYEYMENGSLDGYLFGK-KRAIEWEKLHEIAIGTAKGLVYLHEECQQRIIHY 203
H + ++ E ME G L + + +A + EI + +LH I H
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR 152
Query: 204 DIKPENVLL---DANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYPIT 260
D+KPEN+L + + K+ DFG AK +N TP Y APE L G
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYVAPEVL-GPEKYD 207
Query: 261 HKCDVYSFGMVLF 273
CD++S G++++
Sbjct: 208 KSCDMWSLGVIMY 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + L +L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + GTP Y APE LS Y
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ L+ F LG G
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ENPAQNTA-HLDQFER--IKTLGTGS 54
Query: 91 FGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V G A+K+L++ L +I E + E + L +L
Sbjct: 55 FGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY G + +L +R + + H A YLH +I+
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYR 166
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+++D KV DFG AK + +T GTP Y APE LS Y
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKA 219
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 220 VDWWALGVLIYEMAA 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
T ++ Y T Y APE + G D++S G+++ E++
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMI 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 33/255 (12%)
Query: 33 NAASANK--PEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGG 90
NAA+A K +E V E + +A E FL++ E P + T+ QL+ F + LG G
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGS 53
Query: 91 FGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCH 145
FG V + +G A+K+L++ L +I E + E + LV+L
Sbjct: 54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 146 DQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHY 203
D +V EY+ G + +L +R + + H A YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165
Query: 204 DIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHK 262
D+KPEN+L+D +V DFG AK + +T GTP APE LS Y
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEALAPEIILSKGY--NKA 218
Query: 263 CDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 219 VDWWALGVLIYEMAA 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 57/233 (24%)
Query: 86 LGFGGFGEVYKGQ-FPNGVKIAVKVL-----NRNLGRIAEEQFMAEVGTIGRTYHINLVR 139
L GGF VY+ Q +G + A+K L +N I E FM ++ + H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL-----SGHPNIVQ 90
Query: 140 LYGFCHDQHMTA----------LVYEYMENGSLDGYL--FGKKRAIEWEKLHEIAIGTAK 187
FC + L+ + G L +L + + + + +I T +
Sbjct: 91 ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY------ 241
+ ++H + + IIH D+K EN+LL + K+ DFG A TIS Y
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA---------TTISHYPDYSWS 197
Query: 242 -------------KGTPGYSAPEF--LSGNYPITHKCDVYSFGMVLFEIVGRR 279
TP Y PE L N+PI K D+++ G +L+ + R+
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 170
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 171 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
T ++ Y T Y APE + G D++S G+++ E++
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIMGEMI 219
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 68 VRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKIAVKVLNR--NLGRIAEEQFMA 124
VR ++L +G G F EV + G A+K++N+ L R F
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 125 EVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYL--FGKKRAIEWEKLHEIA 182
E + + +L+ D++ LV EY G L L FG++ E + +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE 170
Query: 183 IGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGY- 241
I A V+ + +H DIKP+N+LLD ++ADFG C + + T+
Sbjct: 171 IVMAIDSVH-----RLGYVHRDIKPDNILLDRCGHIRLADFG---SCLKLRADGTVRSLV 222
Query: 242 -KGTPGYSAPEFLSG------NYPITHKCDVYSFGMVLFEI 275
GTP Y +PE L +CD ++ G+ +E+
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM 263
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 86 LGFGGFGEV-YKGQFPNGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG V G A+K+L++ L +I E + E + LV+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKL 92
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQ 198
D +V EY+ G + +L +R + + H A YLH
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SL 146
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNY 257
+I+ D+KPEN+L+D +V DFG AK + +T GTP Y APE LS Y
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTLC----GTPEYLAPEIILSKGY 201
Query: 258 PITHKCDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 202 --NKAVDWWALGVLIYEMAA 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)
Query: 35 ASANKPEEDVVEVIWEAGQTMERFLQEIGREKPVRFTSLQLNNFTSNYSTRLGFGGFGEV 94
A +E V E + +A E FL++ E P + T+ QL+ F + LG G FG V
Sbjct: 1 AKKGXEQESVKEFLAKAK---EDFLKKW--ETPSQNTA-QLDQF--DRIKTLGTGSFGRV 52
Query: 95 YKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRLYGFCHDQHM 149
+ +G A+K+L++ L +I E + E + LV+L D
Sbjct: 53 MLVKHKESGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKLEFSFKDNSN 110
Query: 150 TALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQRIIHYDIKP 207
+V EY+ G + +L +R + + H A YLH +I+ D+KP
Sbjct: 111 LYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP 164
Query: 208 ENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNYPITHKCDVY 266
EN+L+D +V DFG AK + +T GTP Y APE LS Y D +
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRV-KGRTWXLC----GTPEYLAPEIILSKGY--NKAVDWW 217
Query: 267 SFGMVLFEIVG 277
+ G++++E+
Sbjct: 218 ALGVLIYEMAA 228
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 65 EKPVRFTSLQLNNFTSNYSTRLGFGGFGEVYKGQFP-NGVKIAVKVLNRN----LGRIAE 119
E P + T+ QL+ F + LG G FG V + +G A+K+L++ L +I
Sbjct: 18 ETPSQNTA-QLDQF--DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-- 72
Query: 120 EQFMAEVGTIGRTYHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLH 179
E + E + LV+L D +V EY+ G + +L +R + + H
Sbjct: 73 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPH 129
Query: 180 E--IAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVT 237
A YLH +I+ D+KPEN+L+D +V DFG AK +
Sbjct: 130 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC 186
Query: 238 ISGYKGTPGYSAPE-FLSGNYPITHKCDVYSFGMVLFEIVG 277
GTP Y APE LS Y D ++ G++++E+
Sbjct: 187 -----GTPEYLAPEIILSKGY--NKAVDWWALGVLIYEMAA 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 74
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE + G D++S G ++ E+V +
Sbjct: 192 RAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
APE + G D++S G ++ E+V +
Sbjct: 192 RAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 73
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 74 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 132 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 185
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 74
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 88
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 89 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 147 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 200
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMV 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
T ++ Y T Y APE + G D++S G ++ E++
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 219
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 72
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 73 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 131 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 184
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMV 207
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 88
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 89 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 147 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 200
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMV 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 74
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 133 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 186
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 101
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 160 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 213
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 89
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 69
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 70 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 128 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 102
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 161 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 214
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 116
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 117 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 175 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 228
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 89
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 89
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 148 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 201
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 77 NFTSNYSTR--LGFGGFGEVYKG-QFPNGVKIAVKVLNRNLGRIAEE-QFMAEVGTIGRT 132
FT Y + +G G + + + AVK+++++ EE + + G
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ---- 74
Query: 133 YHINLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYL 192
H N++ L D +V E + G L + +K E E + K + YL
Sbjct: 75 -HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREA-SAVLFTITKTVEYL 132
Query: 193 HEECQQRIIHYDIKPENVL-LDANFSP---KVADFGLAKLCDRNKTHVTISGYKGTPGYS 248
H Q ++H D+KP N+L +D + +P ++ DFG AK + Y T +
Sbjct: 133 HA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY--TANFV 187
Query: 249 APEFLSGNYPITHKCDVYSFGMVLF 273
APE L CD++S G++L+
Sbjct: 188 APEVLE-RQGYDAACDIWSLGVLLY 211
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 102
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 161 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 214
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 101
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 160 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 213
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 116
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 117 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 175 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 228
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 101
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 160 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 213
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 102
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 161 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 214
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
APE + G D++S G ++ E++
Sbjct: 192 RAPEVILG-MGYKENVDIWSVGCIMGEMI 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 179 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 101
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 160 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 213
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 23/200 (11%)
Query: 86 LGFGGFGEVYKGQFP-NGVKIAVKVLNRN----LGRIAEEQFMAEVGTIGRTYHINLVRL 140
LG G FG V + G A+K+L++ L +I E + E + LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI--EHTLNEKRILQAVNFPFLVKL 99
Query: 141 YGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHE--IAIGTAKGLVYLHEECQQ 198
D +V EY+ G + +L +R + + H A YLH
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLH---SL 153
Query: 199 RIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPE-FLSGNY 257
+I+ D+KPEN+L+D +V DFG AK + GTP Y APE LS Y
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGY 208
Query: 258 PITHKCDVYSFGMVLFEIVG 277
D ++ G++++E+
Sbjct: 209 --NKAVDWWALGVLIYEMAA 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 102
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 161 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 214
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
APE + G D++S G ++ E++
Sbjct: 192 RAPEVILG-MGYKENVDIWSVGCIMGEMI 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 121
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 122 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 180 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 233
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMV 256
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 179 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 172 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 96
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 97 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 155 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 208
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMV 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 108
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 109 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 167 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 220
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMV 243
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 215
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 216 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 86 LGFGGFGEVYKG-QFPNGVKIAVKVLNR----------NLGRIAEEQFMAEVGTIGRTYH 134
LG GGFG VY G + + + +A+K + + N R+ E + + + G +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS-- 69
Query: 135 INLVRLYGFCHDQHMTALVYEYMENGSLDGYLFGKKRAIEWEKLHEIAIGTAKGLVYLHE 194
++RL + L+ E E D + F +R E+L V
Sbjct: 70 -GVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 195 ECQQRIIHYDIKPENVLLDANFSP-KVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFL 253
C ++H DIK EN+L+D N K+ DFG L + + GT YS PE++
Sbjct: 128 NCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWI 181
Query: 254 SGNYPITHKCDVYSFGMVLFEIV 276
+ V+S G++L+++V
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMV 204
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 170
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 171 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIV 276
APE + G D++S G ++ E++
Sbjct: 192 RAPEVILG-MGYKENVDIWSVGCIMGEMI 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 172 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 176
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 177 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 200 IIHYDIKPENVLLD-ANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGYSAPEFLSGNYP 258
+ H DIKP NVL++ A+ + K+ DFG AK ++ +V Y + Y APE + GN
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQH 208
Query: 259 ITHKCDVYSFGMVLFEIV 276
T D++S G + E++
Sbjct: 209 YTTAVDIWSVGCIFAEMM 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 173 IEWEKLHEIAIGTAKGLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRN 232
++ E++ + G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 233 KTHVTISGYKGTPGYSAPEFLSGNYPITHKCDVYSFGMVLFEIVGRR 279
T ++ Y T Y APE + G D++S G ++ E+V +
Sbjct: 178 -TSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 188 GLVYLHEECQQRIIHYDIKPENVLLDANFSPKVADFGLAKLCDRNKTHVTISGYKGTPGY 247
G+ +LH IIH D+KP N+++ ++ + K+ DFGLA+ T ++ Y T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 248 SAPEFLSGNYPITHKCDVYSFGMVLFEIVGRRRNAIVGATESLDWFPK 295
APE + G D++S G ++ E++ + + T+ +D + K
Sbjct: 193 RAPEVILG-MGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHIDQWNK 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,308,721
Number of Sequences: 62578
Number of extensions: 533245
Number of successful extensions: 3670
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 1194
length of query: 406
length of database: 14,973,337
effective HSP length: 101
effective length of query: 305
effective length of database: 8,652,959
effective search space: 2639152495
effective search space used: 2639152495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)