Query 015483
Match_columns 406
No_of_seqs 252 out of 518
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 13:25:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015483.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015483hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bz1a1 c.144.1.1 (A:1-174) GT 22.0 40 0.0029 27.6 4.3 46 283-328 26-85 (174)
2 d1v74b_ a.24.20.1 (B:) Colicin 18.3 27 0.002 26.1 2.1 18 56-73 37-54 (87)
3 d1hywa_ d.186.1.1 (A:) Head-to 15.6 19 0.0014 24.9 0.6 28 159-186 26-53 (58)
4 d1khba1 c.91.1.1 (A:260-622) C 13.6 14 0.0011 34.5 -0.8 45 320-364 233-288 (363)
5 d1n0ea_ b.129.1.2 (A:) Hypothe 10.3 1.9E+02 0.014 22.5 5.4 47 299-345 41-102 (141)
6 d1aoaa1 a.40.1.1 (A:121-251) F 9.9 51 0.0037 25.5 1.6 13 192-204 2-16 (131)
7 d1amua_ e.23.1.1 (A:) Phenylal 8.2 1.2E+02 0.0086 27.1 3.7 24 229-252 413-436 (514)
8 d1lcia_ e.23.1.1 (A:) Lucifera 7.8 1.1E+02 0.0077 27.5 3.1 23 230-252 436-458 (541)
9 d1dxxa1 a.40.1.1 (A:9-119) Dys 7.4 74 0.0054 23.6 1.5 10 195-204 9-20 (111)
10 d1pg4a_ e.23.1.1 (A:) Acetyl-C 6.9 1.2E+02 0.0089 28.8 3.2 23 230-252 513-535 (643)
No 1
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]}
Probab=21.97 E-value=40 Score=27.62 Aligned_cols=46 Identities=17% Similarity=0.098 Sum_probs=31.1
Q ss_pred CCCCeeEEEeccCCCC--CCC-ceeeccchH-----------HHHHHHHHHHHHHhcccc
Q 015483 283 EYEPLVAFALSCGMYS--SPA-ISIYTAKNV-----------REELQEAQRDFIRASVGF 328 (406)
Q Consensus 283 ~~ePrIhFAL~cGs~S--sP~-lRvYta~~v-----------~~qLe~A~~eFL~a~v~V 328 (406)
..|...||||+.|.++ .|+ |||-...-+ ..+|+.|.+..-+...||
T Consensus 26 ~~~~~~HlALvkG~i~~~~~vlVRVHs~~~~~Dv~~~~~~~~~~~L~~al~~I~~~g~Gv 85 (174)
T d2bz1a1 26 LATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGI 85 (174)
T ss_dssp TTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEE
T ss_pred CCCCeEEEEEEEcCcccccceeEEeeecccccceecccccccchhHHHHHHHHHHcCCcE
Confidence 4578899999999764 444 588655443 357877777665555554
No 2
>d1v74b_ a.24.20.1 (B:) Colicin D immunity protein {Escherichia coli [TaxId: 562]}
Probab=18.31 E-value=27 Score=26.07 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=15.8
Q ss_pred CccchHHHHhHHHHHHHH
Q 015483 56 PNQLSEEMVRCMKNIFMS 73 (406)
Q Consensus 56 PNkLSEemvrC~~~Iy~~ 73 (406)
-++++.++-.|++.|||-
T Consensus 37 ~~~~~~~l~eClssiF~~ 54 (87)
T d1v74b_ 37 VKDLSPNILNCGEELFMA 54 (87)
T ss_dssp CSSCCHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHH
Confidence 457889999999999996
No 3
>d1hywa_ d.186.1.1 (A:) Head-to-tail joining protein W, gpW {Bacteriophage lambda [TaxId: 10710]}
Probab=15.64 E-value=19 Score=24.88 Aligned_cols=28 Identities=7% Similarity=0.318 Sum_probs=21.7
Q ss_pred eecCcchhhhHHHHHHHHHHHHHHHhcc
Q 015483 159 MSVGKQQLEYASGALKTFRTLVEQLAKV 186 (406)
Q Consensus 159 ~s~d~~~~~ya~~~l~~f~~lv~~L~~V 186 (406)
+..|+.++.|....+..++.++.+|+.+
T Consensus 26 vqKDGr~Veytaasi~eL~~yI~~lE~~ 53 (58)
T d1hywa_ 26 VQKDGRRVEFTATSVSDLKKYIAELEVQ 53 (58)
T ss_dssp EECSSCEEEECTTTHHHHHHHHHHHHHH
T ss_pred EecCCcEEEEeccCHHHHHHHHHHHHHH
Confidence 4678888888777777788889888754
No 4
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.55 E-value=14 Score=34.47 Aligned_cols=45 Identities=13% Similarity=0.355 Sum_probs=27.3
Q ss_pred HHHHhccccccCCeEEechhhH--hhhccc---------CCChhHHHHHHhcCCHH
Q 015483 320 DFIRASVGFSSKGKLLVPKMLH--CFCKGS---------VDDANLAVWISHYLPPL 364 (406)
Q Consensus 320 eFL~a~v~V~~~~kv~LpKi~~--wY~~DF---------~~~~~Ll~wI~~~Lp~~ 364 (406)
+|++.-..+..+..-.+||||+ ||++|= |++.-+|+||.+.+..+
T Consensus 233 dY~~hWL~~g~~~~~k~PkIF~VNWFrKd~~GkFLWPGfGeN~RVLkWI~~Rv~G~ 288 (363)
T d1khba1 233 KYLAHWLSMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGK 288 (363)
T ss_dssp HHHHHHHHGGGSTTCBCCEEEEECSCCBCTTSCBSSCCGGGGHHHHHHHHHHHTC-
T ss_pred HHHHHHHhhhcccccCCCcEEEEEeeeecCCCCccCCCcchhhHHHHHHHHHhcCC
Confidence 4555443332221234899986 999873 22356999999777653
No 5
>d1n0ea_ b.129.1.2 (A:) Hypothetical protein MraZ {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=10.27 E-value=1.9e+02 Score=22.45 Aligned_cols=47 Identities=15% Similarity=0.313 Sum_probs=30.6
Q ss_pred CCCceeeccchHHHHHH-------------HHHHHHHHhc--cccccCCeEEechhhHhhhc
Q 015483 299 SPAISIYTAKNVREELQ-------------EAQRDFIRAS--VGFSSKGKLLVPKMLHCFCK 345 (406)
Q Consensus 299 sP~lRvYta~~v~~qLe-------------~A~~eFL~a~--v~V~~~~kv~LpKi~~wY~~ 345 (406)
.+.|.+|+++..++.-+ ..++.++... +.++..++|.||+-+.-|+.
T Consensus 41 ~~cL~~y~~~~~~~~~~~i~~l~~~~~~~r~~~r~l~~~a~~~~~D~~GRi~lp~~Lr~~a~ 102 (141)
T d1n0ea_ 41 ENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAK 102 (141)
T ss_dssp TSCCEEBCHHHHHHHHHHHTTSCSSSHHHHHHHHHHHTTCCEEECCTTSEEECCHHHHHHTT
T ss_pred CCchhhcCHHHhHHHHHhhhccCcchHHHHHHHHHHHhcceEeeecccceEeeCHHHHHHcC
Confidence 35689999987653322 2233334333 44566789999999988874
No 6
>d1aoaa1 a.40.1.1 (A:121-251) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.92 E-value=51 Score=25.50 Aligned_cols=13 Identities=62% Similarity=0.953 Sum_probs=9.6
Q ss_pred CcchhHHH--HHHHH
Q 015483 192 SSNEKLAF--WINLY 204 (406)
Q Consensus 192 s~~EKLAF--WINiY 204 (406)
+.+||.|| |||-|
T Consensus 2 ~e~ek~~f~~WiN~~ 16 (131)
T d1aoaa1 2 SEEEKYAFVNWINKA 16 (131)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 56788777 88864
No 7
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=8.15 E-value=1.2e+02 Score=27.05 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=20.1
Q ss_pred cceeEEECCEEeeHHHHHHhhccC
Q 015483 229 QKAAYTVGGHSYNAAAIEYMILKM 252 (406)
Q Consensus 229 ~ka~Y~VGG~~~SL~dIEh~ILR~ 252 (406)
.+..++++|..+++.+||..|.+.
T Consensus 413 ~~d~i~~~G~~i~p~~IE~~l~~~ 436 (514)
T d1amua_ 413 IDNQVKIRGHRVELEEVESILLKH 436 (514)
T ss_dssp GGGEEEETTEEEEHHHHHHHHTTS
T ss_pred ccCEEEECCEEECHHHHHHHHHhC
Confidence 345678899999999999888875
No 8
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=7.76 E-value=1.1e+02 Score=27.50 Aligned_cols=23 Identities=22% Similarity=0.294 Sum_probs=19.1
Q ss_pred ceeEEECCEEeeHHHHHHhhccC
Q 015483 230 KAAYTVGGHSYNAAAIEYMILKM 252 (406)
Q Consensus 230 ka~Y~VGG~~~SL~dIEh~ILR~ 252 (406)
+-.++++|+.+++.+||..+.+.
T Consensus 436 ~d~i~~~G~~v~~~~IE~~l~~~ 458 (541)
T d1lcia_ 436 KSLIKYKGYQVAPAELESILLQH 458 (541)
T ss_dssp --CEEETTEEECHHHHHHHHHTS
T ss_pred cCEEEECCEEECHHHHHHHHHhC
Confidence 45578899999999999999886
No 9
>d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.37 E-value=74 Score=23.56 Aligned_cols=10 Identities=40% Similarity=0.953 Sum_probs=8.2
Q ss_pred hhHHH--HHHHH
Q 015483 195 EKLAF--WINLY 204 (406)
Q Consensus 195 EKLAF--WINiY 204 (406)
|+.|| |||-|
T Consensus 9 Q~~~ft~WiN~~ 20 (111)
T d1dxxa1 9 QKKTFTKWVNAQ 20 (111)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 67899 99865
No 10
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=6.90 E-value=1.2e+02 Score=28.85 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=20.6
Q ss_pred ceeEEECCEEeeHHHHHHhhccC
Q 015483 230 KAAYTVGGHSYNAAAIEYMILKM 252 (406)
Q Consensus 230 ka~Y~VGG~~~SL~dIEh~ILR~ 252 (406)
+..+++||+.+++.+||..++++
T Consensus 513 dd~ik~~G~ri~p~eIE~~l~~~ 535 (643)
T d1pg4a_ 513 DDVLNVSGHRLGTAEIESALVAH 535 (643)
T ss_dssp SSEEEETTEEEEHHHHHHHHHHS
T ss_pred ccEEEECCEEECHHHHHHHHHhC
Confidence 55789999999999999999886
Done!