Your job contains 1 sequence.
>015484
MAAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFA
VHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNR
ARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEG
YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQL
MIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSS
HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKA
KISDFSWNKNDPWVISSVADDNTVQVWQMTDSIYRDDDDFLATTDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015484
(406 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 1681 5.4e-173 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 1659 1.2e-170 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 1204 1.9e-122 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 1167 1.6e-118 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 1162 5.4e-118 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 1162 5.4e-118 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 1162 5.4e-118 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 1162 5.4e-118 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 1162 5.4e-118 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 1162 5.4e-118 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 1158 1.4e-117 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 1157 1.8e-117 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 1155 3.0e-117 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 1150 1.0e-116 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 1149 1.3e-116 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 1148 1.6e-116 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 1144 4.4e-116 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 1133 6.4e-115 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 1132 8.2e-115 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 1131 1.0e-114 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 1131 1.0e-114 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 1129 1.7e-114 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 1129 1.7e-114 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 1129 1.7e-114 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 1129 1.7e-114 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 1129 1.7e-114 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 1128 2.2e-114 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 1128 2.2e-114 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 1128 2.2e-114 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 1125 4.5e-114 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 1125 4.5e-114 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 1119 1.9e-113 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 1119 1.9e-113 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 1114 6.6e-113 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 1106 4.6e-112 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 1092 1.4e-110 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 1092 1.4e-110 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 1075 9.0e-109 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 893 1.7e-89 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 821 7.4e-82 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 762 1.3e-75 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 658 1.4e-64 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 621 1.2e-60 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 381 6.1e-58 2
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 560 3.4e-54 1
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 554 1.5e-53 1
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 554 1.5e-53 1
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 553 1.9e-53 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 553 1.9e-53 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 546 1.0e-52 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 506 1.8e-48 1
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 506 1.8e-48 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 476 2.7e-45 1
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 430 2.0e-40 1
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 234 1.1e-35 2
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 234 1.1e-35 2
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 349 7.7e-32 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 345 2.0e-31 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 339 8.8e-31 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 335 2.3e-30 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 330 8.1e-30 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 301 2.1e-26 1
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 301 2.1e-26 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 296 4.8e-26 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 291 2.0e-25 1
UNIPROTKB|Q5JNZ6 - symbol:RBBP7 "Histone-binding protein ... 279 2.0e-24 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 284 1.7e-23 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 273 1.1e-22 2
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 273 5.1e-22 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 255 1.0e-21 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 261 1.8e-20 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 260 2.4e-20 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 243 2.6e-20 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 258 4.1e-20 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 256 7.6e-20 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 254 1.4e-19 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 252 2.4e-19 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 251 4.6e-19 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 246 2.1e-18 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 246 2.1e-18 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 231 4.2e-18 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 229 7.0e-18 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 226 2.4e-17 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 227 2.5e-17 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 238 3.2e-17 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 225 5.1e-17 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 224 5.2e-17 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 223 5.7e-17 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 222 1.4e-16 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 212 4.0e-15 1
POMBASE|SPBC577.09 - symbol:ckn1 "ERCC-8 DNA repair homol... 213 7.2e-15 1
UNIPROTKB|E2RFS7 - symbol:ERCC8 "Uncharacterized protein"... 210 1.5e-14 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 214 2.5e-14 1
UNIPROTKB|E1C100 - symbol:ERCC8 "Uncharacterized protein"... 208 2.7e-14 1
UNIPROTKB|Q13216 - symbol:ERCC8 "DNA excision repair prot... 207 3.4e-14 1
MGI|MGI:1919241 - symbol:Ercc8 "excision repaiross-comple... 207 3.4e-14 1
UNIPROTKB|F1SKV7 - symbol:ERCC8 "Uncharacterized protein"... 206 4.4e-14 1
RGD|1311570 - symbol:Ercc8 "excision repair cross-complem... 204 7.6e-14 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 204 1.5e-13 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 209 1.6e-13 1
WARNING: Descriptions of 1068 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 1681 (596.8 bits), Expect = 5.4e-173, P = 5.4e-173
Identities = 297/400 (74%), Positives = 352/400 (88%)
Query: 1 MAAEE--QDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPT 58
MAAEE +A LDQVEEEF++WK+NTPFLYDL++SHPLEWPSLT+HWVPS P PYS DP
Sbjct: 1 MAAEEGKDEAGLDQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPY 60
Query: 59 FAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEV 118
FAVHK +LGTHTS +FLM+AD V+PT D+E +GG+++ P++PKVEI QKIRVDGEV
Sbjct: 61 FAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEV 120
Query: 119 NRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQ-DDCDPDLRLKGHDKEGYGLSWSPF 177
NRARCMPQKP LVG KTS EV++FD A+ + K Q +CDPDLRL GH++EGYGL+WS F
Sbjct: 121 NRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSF 180
Query: 178 KEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDD 237
KEGYL+SGS D +ICLWDVSA A DKV++ MHVYE H+S++EDV+WH+KNEN+FGSAGDD
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD 240
Query: 238 CQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI 297
CQL+IWDLRTNQ Q +VK HE+E+NYLSFNP+NEWVLATASSD+TVALFD+RK+T PLH+
Sbjct: 241 CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV 300
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE--LDAEDGPPELLFSH 355
LS H EVFQVEWDPNHETVLASS +DRRLMVWD+NR+GDEQLE LDAEDGPPELLFSH
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 356 GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIYR 395
GGHKAKISDF+WNK++PWVISSVA+DN++QVWQM +SIYR
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYR 400
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 1659 (589.1 bits), Expect = 1.2e-170, P = 1.2e-170
Identities = 298/399 (74%), Positives = 344/399 (86%)
Query: 1 MAAE-EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTF 59
MA E +++ + QVEE+F+VWKKNTPFLYDL++SHPLEWPSLTVHWVPS P PY AD F
Sbjct: 1 MADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYF 60
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVN 119
VHK +LGTHTS +FLM+AD V PT ++E +GG N++P IPKVEI Q+IRVDGEVN
Sbjct: 61 GVHKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVN 120
Query: 120 RARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQ-DDCDPDLRLKGHDKEGYGLSWSPFK 178
RARCMPQKP LVG KTS CEV++FD AK A K Q +CDPDLRL GHDKEGYGLSWSPFK
Sbjct: 121 RARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFK 180
Query: 179 EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDC 238
EGYL+SGS D KICLWDVSA QDKV++AM VYE HES + DVSWH+KNENLFGSAG+D
Sbjct: 181 EGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDG 240
Query: 239 QLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
+L+IWD RTNQ Q +VK HE+EVNYLSFNP+NEWVLATASSD+TVALFD+RK+ PLH++
Sbjct: 241 RLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVM 300
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE--LDAEDGPPELLFSHG 356
SSH EVFQVEWDPNHETVLASS +DRRLMVWDLNR+G+EQLE LDAEDGPPELLFSHG
Sbjct: 301 SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG 360
Query: 357 GHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIYR 395
GHKAKISDF+WNKN+PWVI+SVA+DN++QVWQM +SIYR
Sbjct: 361 GHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYR 399
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 1204 (428.9 bits), Expect = 1.9e-122, P = 1.9e-122
Identities = 226/406 (55%), Positives = 293/406 (72%)
Query: 4 EEQDASLDQ--VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAV 61
EE +++ + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P +P D ++V
Sbjct: 6 EEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD--YSV 63
Query: 62 HKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP--------VIPKVEIAQKIR 113
K +LGTHTSE PN+LM+A LP D+ES +++ KV+I Q+I
Sbjct: 64 QKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQIN 123
Query: 114 VDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD--CDPDLRLKGHDKEGYG 171
DGEVNRAR MPQ P ++ TKT + EVYVFD +K K D C+PDL+L+GH EGYG
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
LSWS FK+G+L+SGS D +ICLWD++A ++K +DA +++AHE VVEDV+WHL++E LF
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 232 GSAGDDCQLMIWDLRT---NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
GS GDD L+IWDLR+ ++ Q V AH EVN L+FNP+NEWV+AT S+D TV LFD+
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
RK++ LH SH EEVFQV W+P +ET+LAS RRLMVWDL+RI +EQ DAEDGP
Sbjct: 304 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 363
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PELLF HGGH +KISDFSWN + WVISSVA+DN +Q+WQM ++IY
Sbjct: 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 221/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT SC+V VFD K K +C+PDLRL+GH KEGYGLSW+P G L
Sbjct: 134 PQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 220/396 (55%), Positives = 285/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 220/396 (55%), Positives = 284/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 220/396 (55%), Positives = 284/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
Identities = 219/395 (55%), Positives = 284/395 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+P G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
AKISDFSWN N+PWVI SV++DN +QVWQM ++I
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 218/410 (53%), Positives = 293/410 (71%)
Query: 2 AAEEQDASLDQ--VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTF 59
AAE D ++++ + EE+ +WKKNTPFLYDL+++H LEWPSLT W+P + D +
Sbjct: 8 AAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKD--Y 65
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP---------VIPKVEIAQ 110
+VH+ +LGTHTS++ N L+IA LP++D++ + G +N V K+EI
Sbjct: 66 SVHRLILGTHTSDE-QNHLLIASVQLPSEDAQFD-GSHYDNEKGEFGGFGSVCGKIEIEI 123
Query: 111 KIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKE 168
KI +GEVNRAR MPQ ++ TKT S +V VFD K K + +C PDLRL+GH KE
Sbjct: 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE 183
Query: 169 GYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKN 227
GYGLSW+P GYL+S S D+ ICLWD++A ++ +VIDA +++ H +VVEDV+WHL +
Sbjct: 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH 243
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVA 284
E+LFGS DD +LMIWD R N T + V AH EVN LSFNPY+E++LAT S+D TVA
Sbjct: 244 ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303
Query: 285 LFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA 344
L+D+R + + LH SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DA
Sbjct: 304 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363
Query: 345 EDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
EDGPPELLF HGGH AKISDFSWN N+PW+I SV++DN +QVWQM +++Y
Sbjct: 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 218/396 (55%), Positives = 282/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+P +P D F+VH+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSVHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT + +V VFD K K +C PDLRL+GH KEGYGLSW+P G L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+S + ++ K++DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 222/412 (53%), Positives = 290/412 (70%)
Query: 1 MAAEE-QDASLDQ--VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA +E D ++++ + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P +P D
Sbjct: 1 MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSE-------SNVGGK--NENPVIPKVEI 108
+ VH+ VLGTHTS++ N L+IA A +P D++ S G + V K+EI
Sbjct: 60 -YVVHRLVLGTHTSDE-QNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEI 117
Query: 109 AQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHD 166
KI +GEVNRAR MPQ P ++ TKT + +V FD K K DC PDLRL+GH
Sbjct: 118 EIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQ 177
Query: 167 KEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHL 225
KEGYGLSW+P G L+S S D+ ICLWD+S ++ K++DA ++ H +VVEDVSWHL
Sbjct: 178 KEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHL 237
Query: 226 KNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTT 282
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D T
Sbjct: 238 LHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
VAL+D+R + + LH SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 357
Query: 343 DAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
DAEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 218/396 (55%), Positives = 283/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLT W+ +P D F++H+ VLGTHTS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKD--FSIHRLVLGTHTSD 74
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L+IA LP D++ + K E V K+EI KI DGEVNRAR M
Sbjct: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT + +V VFD K K +C+P+LRL+GH KEGYGLSW+P G L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 215/396 (54%), Positives = 280/396 (70%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P +P D +A+H VLGTHTS+
Sbjct: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD--YALHWLVLGTHTSD 73
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L++A +P D++ + K E V K+E KI +GEVNRAR M
Sbjct: 74 E-QNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K DC PDLRL+GH KEGYGLSW+ G+L
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ +CLWD+SA ++ KV+DA ++ H +VVEDV+WHL +E+LFGS DD +LM
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 312
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 213/403 (52%), Positives = 290/403 (71%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGE 117
+A+H VLGTHTS++ N L++A +P D++ + + + K+E KI +GE
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKG-GKIECEIKINHEGE 116
Query: 118 VNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWS 175
VNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+
Sbjct: 117 VNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWN 176
Query: 176 PFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSA 234
G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL +E+LFGS
Sbjct: 177 SNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSV 236
Query: 235 GDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R +
Sbjct: 237 ADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 296
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPEL 351
+ LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPEL
Sbjct: 297 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
Query: 352 LFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
LF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 357 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 399
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 219/410 (53%), Positives = 289/410 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P +P D
Sbjct: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDS--ESNVGG-KNE----NPVIPKVEIAQ 110
+A+H VLGTHTS++ N L++A +P D S K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEI 117
Query: 111 KIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKE 168
KI +GEVNRAR MPQ P ++ TKT S +V VFD K K +C+PDLRL+GH KE
Sbjct: 118 KINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 177
Query: 169 GYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKN 227
GYGLSW+ +G+L+S S D+ +CLWD+SA ++ K++DA ++ H +VVEDV+WHL +
Sbjct: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH 237
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVA 284
E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVA
Sbjct: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
Query: 285 LFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA 344
L+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DA
Sbjct: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357
Query: 345 EDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
EDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 213/403 (52%), Positives = 289/403 (71%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGE 117
+A+H VLGTHTS++ N L++A +P D++ + + K+E KI +GE
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSEKG-GKIECEIKINHEGE 116
Query: 118 VNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWS 175
VNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+
Sbjct: 117 VNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWN 176
Query: 176 PFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSA 234
G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL +E+LFGS
Sbjct: 177 SNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSV 236
Query: 235 GDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R +
Sbjct: 237 ADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 296
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPEL 351
+ LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPEL
Sbjct: 297 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
Query: 352 LFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
LF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 357 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 399
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 215/396 (54%), Positives = 280/396 (70%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P +P D +A+H VLGTHTS+
Sbjct: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD--YALHWLVLGTHTSD 73
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L++A +P D++ + K E V K+E KI +GEVNRAR M
Sbjct: 74 E-QNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C PDLRL+GH KEGYGLSW+ G+L
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ +CLWD+SA ++ KV+DA V+ H +VVEDV+WHL +E+LFGS DD +LM
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 312
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 216/411 (52%), Positives = 291/411 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S +V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELD 343
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ D
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 344 AEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
Identities = 211/396 (53%), Positives = 282/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D +A+H VLGTHTS+
Sbjct: 60 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 117
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L++A +P D++ + K E V K+E KI +GEVNRAR M
Sbjct: 118 E-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P+++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+ G+L
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL +E+LFGS DD +LM
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 242 IWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 356
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 357 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 416
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 417 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 452
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
Identities = 211/396 (53%), Positives = 282/396 (71%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D +A+H VLGTHTS+
Sbjct: 60 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 117
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L++A +P D++ + K E V K+E KI +GEVNRAR M
Sbjct: 118 E-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P+++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+ G+L
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ +CLWD++A ++ K++DA ++ H +VVEDV+WHL +E+LFGS DD +LM
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 242 IWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 356
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 357 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 416
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 417 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 452
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 213/409 (52%), Positives = 285/409 (69%)
Query: 1 MAAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVP-SPPQPYSADPTF 59
M + +D + EE+ +WK++TPFLYD++++H LEWPSLTV W+P QP + +
Sbjct: 1 MTTQMEDVEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQP---NKPY 57
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTK----------DSESNVGGKNENPVIPKVEIA 109
++ K +LGTHTS++ N+LM+A LP D++ VGG V K+EI
Sbjct: 58 SIEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGN--VSEKIEII 115
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD--CDPDLRLKGHDK 167
QKI +GEVNRAR MPQ +++ TKT S EVY+FD K + D C P+L+L GH K
Sbjct: 116 QKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKK 175
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQ-DKVIDAMHVYEAHESVVEDVSWHLK 226
EGYG+SW+P KEG+L+S S D IC+WD+SA ++ D +DA+++Y H S+VEDV+WH
Sbjct: 176 EGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYI 235
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVAL 285
++ FGS GDD +LMIWD RT V +AH EVN LSFNP+ E+++AT S+D TVAL
Sbjct: 236 HDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVAL 295
Query: 286 FDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAE 345
+DMR + LH L SHT+EVFQV++ P++ETVLAS DRR+ VWDL+RIG+EQ DA
Sbjct: 296 WDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAA 355
Query: 346 DGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
DGPPELLF HGGH +KISDFSWN NDPW I+SVA+DN +Q+WQM ++IY
Sbjct: 356 DGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAENIY 404
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 213/396 (53%), Positives = 279/396 (70%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WK NTPFLYDL+++H LEWPSLT W+P +P D F +H+ VLGTHTS+
Sbjct: 17 INEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FGIHRLVLGTHTSD 73
Query: 73 DFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ + L+IA LP D++ + K E V K+EI KI +GEVNRAR M
Sbjct: 74 EQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKINYEGEVNRARYM 133
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P ++ TKT S +V VFD K K +C+ DL L+GH KEGYGLSW+P+ GYL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYL 193
Query: 183 VSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+S S D+ ICLWD+SA+ ++ KV+ A ++ H +VVEDVSWHL +E+LFGS DD +LM
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 242 IWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
IWD R+N T + V A+ EVN LSFNP +E++LA+ S D TVAL+D+R + + LH
Sbjct: 254 IWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSF 313
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH
Sbjct: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 216/412 (52%), Positives = 290/412 (70%)
Query: 1 MAAEE--QDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADP 57
MA++E +D ++V EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD- 59
Query: 58 TFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVG----GKNE----NPVIPKVEIA 109
+A+H VLGTHTS++ N L++A +P D++ + K E V K+E
Sbjct: 60 -YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDK 167
KI +GEVNRAR MPQ P+++ TKT S V VFD K K +C+PDLRL+GH K
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLK 226
EGYGLSW+ G+L+S S D+ +CLWD++A ++ K++DA V+ H +VVEDV+WHL
Sbjct: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLL 237
Query: 227 NENLFGSAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+E+LFGS DD +LM+WD R+N T + V AH EVN LSFNPY+E++LAT S+D TV
Sbjct: 238 HESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 284 ALFDMRKMTVPLHILSSHTEEVFQV-EWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
AL+D+R + + LH SH +E+FQV W P++ET+LASS DRRL VWDL++IG+EQ
Sbjct: 298 ALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 357
Query: 343 DAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
DAEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+WQM ++IY
Sbjct: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 409
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 209/405 (51%), Positives = 288/405 (71%)
Query: 1 MAAEEQDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTF 59
MA E S D+V +E+ +WKKNTPFLYDL+++H LEWPSL+V W+P + S+D T
Sbjct: 1 MATIEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHT- 58
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQK 111
VH+ +LGTHTS++ N L+I+ +PT +++ + + E V KVE +
Sbjct: 59 -VHRLILGTHTSDE-QNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIR 116
Query: 112 IRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDC-DPDLRLKGHDKEGY 170
I +GEVNRAR MPQKP ++ TK+ S +VY+FD K +D+ +P L+LKGH KEGY
Sbjct: 117 INHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGY 176
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
GLSW+P KEG ++S S D +C WD++ A + + A +++ HESVVEDV+WH+ ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDG 236
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
+FGS GDD +L+IWDLRTN + AH EVN L+FNPY+E++LAT S+D TVAL+D+R
Sbjct: 237 VFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP 349
+ + LH SH +E+FQV+W P++ET+LASS D+RL VWDL++IG++Q DAEDGPP
Sbjct: 297 NLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPP 356
Query: 350 ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
ELLF HGGH AKISDFSWN N+PWV+ SV++DN +QVWQM D+IY
Sbjct: 357 ELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIY 401
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 208/406 (51%), Positives = 289/406 (71%)
Query: 1 MAAEEQDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTF 59
MA E S D+V +E+ +WKKNTPFLYDL+++H LEWPSL+V W+P + S D T
Sbjct: 1 MATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNS-DHT- 58
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQK 111
+H+ +LGTHTS++ N L+I+ +PT D++ + ++E V KVE +
Sbjct: 59 -IHRLILGTHTSDE-QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIR 116
Query: 112 IRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDC-DPDLRLKGHDKEGY 170
I +GEVNRAR MPQK N++ TK+ +VY+FD K + +D+ +P +RLKGH KEGY
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGY 176
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKV--IDAMHVYEAHESVVEDVSWHLKNE 228
GLSW+P KEG ++S S D +C WD++A Q+ + A V++ HESVVEDV+WH+ ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINA-NQNVAGELQAKDVFKGHESVVEDVAWHVLHD 235
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
+FGS GDD +L+IWD+RT+ + AH EVN L+FNPY+E++LAT S+D TVAL+D+
Sbjct: 236 GVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL 295
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
R + + LH SH +E+FQV+W P++ET+LASS D+RL VWDL++IG++Q DAEDGP
Sbjct: 296 RNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGP 355
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PELLF HGGH AKISDFSWN N+PWV+ SV++DN +QVWQM D+IY
Sbjct: 356 PELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIY 401
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 208/406 (51%), Positives = 289/406 (71%)
Query: 1 MAAEEQDASLDQV-EEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTF 59
MA E S D+V +E+ +WKKNTPFLYDL+++H LEWPSL+V W+P + S D T
Sbjct: 1 MATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNS-DHT- 58
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQK 111
+H+ +LGTHTS++ N L+I+ +PT D++ + ++E V KVE +
Sbjct: 59 -IHRLILGTHTSDE-QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIR 116
Query: 112 IRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDC-DPDLRLKGHDKEGY 170
I +GEVNRAR MPQK N++ TK+ +VY+FD K + +D+ +P +RLKGH KEGY
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGY 176
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKV--IDAMHVYEAHESVVEDVSWHLKNE 228
GLSW+P KEG ++S S D +C WD++A Q+ + A V++ HESVVEDV+WH+ ++
Sbjct: 177 GLSWNPNKEGLILSASDDQTVCHWDINA-NQNVAGELQAKDVFKGHESVVEDVAWHVLHD 235
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
+FGS GDD +L+IWD+RT+ + AH EVN L+FNPY+E++LAT S+D TVAL+D+
Sbjct: 236 GVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL 295
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
R + + LH SH +E+FQV+W P++ET+LASS D+RL VWDL++IG++Q DAEDGP
Sbjct: 296 RNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGP 355
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PELLF HGGH AKISDFSWN N+PWV+ SV++DN +QVWQM D+IY
Sbjct: 356 PELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIY 401
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 207/377 (54%), Positives = 268/377 (71%)
Query: 32 VSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSE 91
++H LEWPSLT W+P +P D F++H+ VLGTHTS++ N L+IA LP D++
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQ 57
Query: 92 SNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVF 143
+ K E V K+EI KI +GEVNRAR MPQ P ++ TKT S +V VF
Sbjct: 58 FDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVF 117
Query: 144 DCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQ 201
D K K +C+PDLRL+GH KEGYGLSW+P G+L+S S D+ ICLWD+SA+ +
Sbjct: 118 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 177
Query: 202 D-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAH 257
+ KV+DA ++ H +VVEDVSWHL +E+LFGS DD +LMIWD R+N T + V AH
Sbjct: 178 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAH 237
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETV 317
EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH SH +E+FQV+W P++ET+
Sbjct: 238 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 297
Query: 318 LASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISS 377
LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGGH AKISDFSWN N+PWVI S
Sbjct: 298 LASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 357
Query: 378 VADDNTVQVWQMTDSIY 394
V++DN +QVWQM ++IY
Sbjct: 358 VSEDNIMQVWQMAENIY 374
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 173/405 (42%), Positives = 248/405 (61%)
Query: 5 EQDASLD---QVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAV 61
E +A +D ++EE+ +WK+N PFLYDL+++H LEWPSLT+ W+P D +++
Sbjct: 15 ELNAEIDLQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTD--YSI 72
Query: 62 HKFVLGTHTSEDFPNFLMIADAVLPTKDSES-----NVGGKNENPVIPKVEIAQKIRVDG 116
+ +LGTHTS + N+L IA LP D ++ + + + +EI+QKI DG
Sbjct: 73 QRLILGTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDG 132
Query: 117 EVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSP 176
+VNRAR MPQKP ++ T Y+FD + P LKGH EG+GL W+P
Sbjct: 133 DVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKGHTAEGFGLCWNP 192
Query: 177 FKEGYLVSGSHDNKICLWDVSALA----QDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
G L +G+ D ICLWDV + + KVI + Y H +V DV +H ++E L
Sbjct: 193 NLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLA 252
Query: 233 SAGDDCQLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
S DDC L I D R N ++ ++AH K +N ++ NP+N+++LATAS+D TVAL+D+R
Sbjct: 253 SVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLR 312
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP 349
LH L H +EV+ +EW P+ E +LASS+ DRR+ +WDL +IG+EQ DAEDG P
Sbjct: 313 NPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSP 372
Query: 350 ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
ELLF HGGH +IS+FSW N+ WV+ S+ADDN +Q+W + I+
Sbjct: 373 ELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVIW 417
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 251 QQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR---------KMTVPLHILSSH 301
Q +K H E L +NP LAT + D + L+D++ K+ P+ H
Sbjct: 175 QAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRH 234
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAK 361
T+ V V++ P HE +LAS +DD L + D L+ E+ P+++ +H KA
Sbjct: 235 TDIVNDVQFHPQHEALLASVSDDCTLQIHDTR--------LNPEEEAPKVIQAHS--KA- 283
Query: 362 ISDFSWNKNDPWVISSVADDNTVQVWQMTDSIYR 395
I+ + N + +++++ + D TV +W + + R
Sbjct: 284 INAVAINPFNDYLLATASADKTVALWDLRNPYQR 317
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 163/400 (40%), Positives = 242/400 (60%)
Query: 9 SLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGT 68
S ++ +E +WKKN P+LYD +V+ +EWPSL+V W+P + ++D + +H+ + GT
Sbjct: 6 SCEETSKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSS--MHRMIHGT 63
Query: 69 HTSEDFPNFLMIADAVLPTK---------DSE-SNVGGKNENPVIPKVEIAQKIRVDGEV 118
HT N LMI+ + T DSE GG E K + KI GEV
Sbjct: 64 HTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAA-KWDTEIKINHPGEV 122
Query: 119 NRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD-CDPDLRLKGHDKEGYGLSWSPF 177
+RAR MP P ++ ++ S +VY+FD K + +D P LRLKGH+ EGYG+SWS
Sbjct: 123 HRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNT 182
Query: 178 KEGYLVSGSHDNKICLWDVSA--LAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAG 235
+EG+L++ D IC WD++A +++ ++ H S EDVS+H + +FGS G
Sbjct: 183 REGHLLTAGDDGMICHWDINANQTISGQIVPQSK-FKGHSSNAEDVSFHALHNFVFGSVG 241
Query: 236 DDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL 295
DD +L +WDLR ++ Q H EVN ++FNP++E++LAT S D TVAL+DMR M +
Sbjct: 242 DDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKM 301
Query: 296 HILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG--PPELLF 353
+ L H +E+FQV + P++ETVLASS D R++VWD+++I D A PPE++F
Sbjct: 302 YTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIF 361
Query: 354 SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
H GH K++DFSWN N PW I S + N +QVW++++S+
Sbjct: 362 IHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSL 401
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 156/395 (39%), Positives = 226/395 (57%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
EE+ + EE+ WKKN PFLYD+I+S LEWP+LT W+P ++D ++ H+
Sbjct: 16 EEERTEEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQD--ASDKPYSTHR 73
Query: 64 FVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC 123
+LGTHTS D N+L IA LP ++ + E I + K + E+N
Sbjct: 74 LLLGTHTSSDAQNYLQIAQVQLPNPNAPNPDDYDEERGEIGGYGGSSK-KAPMEINFK-- 130
Query: 124 MPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLV 183
+ QK + G + + V ++D +K +P + L GH +EG+GLSWSP G+L
Sbjct: 131 IVQKIDHKG-EVNKARVMIWDRSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLA 189
Query: 184 SGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI 242
+G D++ ++ K + + Y H S+V DV H + +L G+ DD L I
Sbjct: 190 TGR--------DLTTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQI 241
Query: 243 WDLRTNQTQQRVKA----HEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
D R +T + H +N ++FNP E VLAT S+D T+ L+D+R + LH L
Sbjct: 242 LDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTL 301
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
+HT+ V + W P E VLAS++ DR++M WDL+R G+EQ DA+DGPPELLF HGGH
Sbjct: 302 ENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGH 361
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
+ISDFSWN NDPWV+ S A+DN +QVW++ D+I
Sbjct: 362 TNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAI 396
Score = 144 (55.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 52/203 (25%), Positives = 88/203 (43%)
Query: 118 VNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYG-LSWSP 176
VN + P +L+GT + + + D + AE + + G ++ ++++P
Sbjct: 217 VNDVQHHPLHSSLIGTVSDDITLQILD-TRVAETTRAAATAE----GQHRDAINAIAFNP 271
Query: 177 FKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGD 236
E L +GS D I LWD+ L + K +H E H V +SWH E + SA
Sbjct: 272 AAETVLATGSADKTIGLWDLRNL-KTK----LHTLENHTDSVTSISWHPFEEAVLASASY 326
Query: 237 DCQLMIWDL-RTNQTQQRVKA-------------HEKEVNYLSFNPYNEWVLATASSDTT 282
D ++M WDL R + Q A H ++ S+N + WVL +A+ D
Sbjct: 327 DRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNL 386
Query: 283 VALFDMRKMTVPLHILSSHTEEV 305
+ ++ + V + TEE+
Sbjct: 387 LQVWKVADAIVGKDMEDVPTEEL 409
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 144/399 (36%), Positives = 221/399 (55%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
E Q+ L V+EE+ +WK N P +YD + L WPSLTV W+P+P Q D F +
Sbjct: 2 ENQEKPLS-VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQ--ELDGGFIKQE 58
Query: 64 FVLGTHTSEDFPNFLMIADAVLP-----TKDSESNVGGKNENPV-IPK--VEIAQKIRVD 115
++GTHTS + N+L A+ LP +D + G + ++ + P+ + I K +
Sbjct: 59 LIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHE 118
Query: 116 GEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWS 175
E+ RAR MPQ PN+V T V+++ ++E Q LK H GY LS+S
Sbjct: 119 EEITRARYMPQDPNIVATINGQGTVFLYS---RSEGLQST------LKFHKDNGYALSFS 169
Query: 176 PFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAG 235
+G L+SGS D+ + LW+V + D + H ++ D WH N++LFG+
Sbjct: 170 TLVKGRLLSGSDDHTVALWEVGS-GGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVS 228
Query: 236 DDCQLMIWDLRTNQTQ-QRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVP 294
+D L I D+R N T VK + N L+F+ ++ +LA A D+ V L+D+R M P
Sbjct: 229 EDSLLKINDVRANNTTIDTVKCPQP-FNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEP 287
Query: 295 LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFS 354
LH +S H + V +E+ + + V+ SS D RLM+WDL +IG EQ DAEDG PEL+
Sbjct: 288 LHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMV 347
Query: 355 HGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
H GH++ ++DF N PW+++S ++N +QVW+ + S+
Sbjct: 348 HAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 386
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 137/407 (33%), Positives = 221/407 (54%)
Query: 3 AEEQDASLDQ-VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAV 61
A E+ + ++ + EE+ +WKKN+PFLYDLI++ LEWP +++ W P Q A+ +
Sbjct: 15 ASEEGINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE--QQIFAEHGYTE 72
Query: 62 HKFVLGTHTSEDFPNFLM-IADAVLP----TKDSESNVGGKNENPVIPKVEIAQKIRVDG 116
K LG D +L+ +A LP T + G + +V I+
Sbjct: 73 QKMFLGVRA--DVGKYLLAVASIQLPYLNQTVPPTTMEGASAGDESSLRVNISNLYSHPE 130
Query: 117 EVNRARCMPQKPNLVGTKTS-SCEVYVFD---CAKQAEKQQDDCDPDLRLKGHDKEGYGL 172
V A+ MPQ + V T + +V VFD + + P RL H + +
Sbjct: 131 SVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSV 190
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-EAHESVVEDVSWHLKNENLF 231
W+ +G LVSGS D + WD++A + + V+ +HE V DV +H K+++L
Sbjct: 191 CWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLL 250
Query: 232 GSAGDDCQLMIWDLR----TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 287
S D L + D+R + + + V AH ++ ++FNP+N+++LAT S+D T+AL+D
Sbjct: 251 ASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWD 310
Query: 288 MRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
+R + LH L H + V ++ + P+ E +LAS++ DRR +VWDL+RIG++Q +A+DG
Sbjct: 311 LRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDG 370
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PPELLF HGGH + D W N W +++ A+DN +Q+W + SI+
Sbjct: 371 PPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIW 417
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 381 (139.2 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 78/200 (39%), Positives = 115/200 (57%)
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT--NQTQQRVKAHEKEVNYLSFN 267
VY HE VEDV++ + F S GDD L++WD RT N + KAH+ +++ + +N
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 268 PYNEWVLATASSDTTVALFDMRKMTV-----PLHILSSHTEEVFQVEWDPNHETVLASSA 322
P+++ ++ T S+D TV LFD RK+T P++ H V V+W P+ +V SSA
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 323 DDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADD- 381
+D L +WD +R+ + A P L F H GH+ K+ DF WN +DPW I SV+DD
Sbjct: 407 EDGLLNIWDYDRVSKKSDR--AAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDC 464
Query: 382 ------NTVQVWQMTDSIYR 395
T+Q+W+M+D IYR
Sbjct: 465 ETTGGGGTLQIWRMSDLIYR 484
Score = 232 (86.7 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 61/191 (31%), Positives = 91/191 (47%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
V+E+++ WK P LYD + +H L WPSL+ W P Q + + L T
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR----QRLYLSEQTDG 119
Query: 73 DFPNFLMIA--DAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNL 130
PN L+IA + V P + ++ NE P V+ + I GEVNR R +PQ +
Sbjct: 120 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKI 179
Query: 131 VGTKTSSCEVYVFDCAKQAEKQQ----DDCDPDLRLKGH-DKEGYGLSWSPFKEGYLVSG 185
V T T S +V ++D Q + + PDL L GH D + L+ P E +++SG
Sbjct: 180 VATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCP-TEPFVLSG 238
Query: 186 SHDNKICLWDV 196
D + LW +
Sbjct: 239 GKDKSVVLWSI 249
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
K HD + + + W+P + +++GS DN + L+D L + V ++ +E H++ V V
Sbjct: 334 KAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQ 393
Query: 223 WHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVK-----------AHEKEVNYLSFNPYN 270
W ++FGS+ +D L IWD R ++ R H +V +N +
Sbjct: 394 WSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASD 453
Query: 271 EWVLATASSD 280
W + + S D
Sbjct: 454 PWTIVSVSDD 463
Score = 68 (29.0 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 23/94 (24%), Positives = 37/94 (39%)
Query: 294 PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLF 353
P + H + V V + P S DD L++WD A G +
Sbjct: 284 PRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWD------------ARTGTNPVTK 331
Query: 354 SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
H A + WN +D +I + + DNTV+++
Sbjct: 332 VEKAHDADLHCVDWNPHDDNLILTGSADNTVRLF 365
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 102/162 (62%), Positives = 128/162 (79%)
Query: 236 DDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
DD +LMIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R +
Sbjct: 3 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 62
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELL 352
+ LH SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELL
Sbjct: 63 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELL 122
Query: 353 FSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
F HGGH AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 123 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 164
Score = 160 (61.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P + H E LS++P+ E L +GS D + LWD+ L K+ +H +E+H+
Sbjct: 20 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KL--KLHSFESHKDE 74
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKA-------------HEKEVNY 263
+ V W NE + S+G D +L +WDL + + Q A H +++
Sbjct: 75 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 134
Query: 264 LSFNPYNEWVLATASSDTTVALFDM 288
S+NP WV+ + S D + ++ M
Sbjct: 135 FSWNPNEPWVICSVSEDNIMQVWQM 159
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 126/407 (30%), Positives = 213/407 (52%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
E Q L + + W+ NT LY++I+ + EWPSL + W+P + Y D +A
Sbjct: 19 ESQHNYLGSNIDNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP---KVYKNDEEYAYQD 75
Query: 64 FVLGTHTSEDFPNFLMIADAVLPTKD-SESNVGGK--NE------NPVIPKVEIAQKIRV 114
+LGT+T+E N+++I + LP+++ S S+ + N+ N I KI
Sbjct: 76 LILGTYTTEK-NNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYH 134
Query: 115 DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD---CDP----DLRLKGHDK 167
+ E+N+ C P+ ++V S + +F+ K +D D D LKGH
Sbjct: 135 ESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLY 194
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+G+GL W K Y+ S D+ +C+WD++ DK++ + Y H ++D W N
Sbjct: 195 QGWGLEWDD-KNNYISSCGDDSYLCIWDMNT--SDKIMHPIVKYFNHNIPLQDCCW---N 248
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 287
+N S ++ + I+D+R + A +N + NP+N+ + ATA ++ + L+D
Sbjct: 249 DNNVLSVSENGHINIYDIRNKTVVNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWD 308
Query: 288 MRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
MR LH + S E + +++WD +L+SS D+ + +D N+IG EQ D++DG
Sbjct: 309 MRFTNKSLHRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDG 368
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PPEL+F HGGH + I D+S N + +ISS+++DNT+ +WQ + Y
Sbjct: 369 PPELIFIHGGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAY 415
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 126/407 (30%), Positives = 213/407 (52%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
E Q L + + W+ NT LY++I+ + EWPSL + W+P + Y D +A
Sbjct: 19 ESQHNYLGSNIDNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP---KVYKNDEEYAYQD 75
Query: 64 FVLGTHTSEDFPNFLMIADAVLPTKD-SESNVGGK--NE------NPVIPKVEIAQKIRV 114
+LGT+T+E N+++I + LP+++ S S+ + N+ N I KI
Sbjct: 76 LILGTYTTEK-NNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYH 134
Query: 115 DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD---CDP----DLRLKGHDK 167
+ E+N+ C P+ ++V S + +F+ K +D D D LKGH
Sbjct: 135 ESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLY 194
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+G+GL W K Y+ S D+ +C+WD++ DK++ + Y H ++D W N
Sbjct: 195 QGWGLEWDD-KNNYISSCGDDSYLCIWDMNT--SDKIMHPIVKYFNHNIPLQDCCW---N 248
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 287
+N S ++ + I+D+R + A +N + NP+N+ + ATA ++ + L+D
Sbjct: 249 DNNVLSVSENGHINIYDIRNKTVVNSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWD 308
Query: 288 MRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
MR LH + S E + +++WD +L+SS D+ + +D N+IG EQ D++DG
Sbjct: 309 MRFTNKSLHRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDG 368
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
PPEL+F HGGH + I D+S N + +ISS+++DNT+ +WQ + Y
Sbjct: 369 PPELIFIHGGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAY 415
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 130/405 (32%), Positives = 223/405 (55%)
Query: 5 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKF 64
++D D VE +F WK N+ LYD + LEWPSL+V + + + +++
Sbjct: 36 DEDEEED-VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENN---VLNQI 91
Query: 65 V-LGTHTSEDFPNFLMIADAVLPTKD--SESNVGGKNEN-------PVIPKVEIAQKIRV 114
V +GTHTS PNFL + D + P + E + NEN K I KI
Sbjct: 92 VCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKIAH 151
Query: 115 DGEVNRARCMP-QKPNLVGTKTSSCEVYVFDCAK-QAEKQQDDCDPDLRLKGHDKEGYGL 172
GEVNR + +P +K N V TK V++FD K + E D +P++ G+ +G+GL
Sbjct: 152 TGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFGL 211
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
+ P K+ Y+++ ++D I ++D + L K + + + ++S V D+S + NL
Sbjct: 212 DFQPIKK-YILTCANDGLINVYDYNTL-NTKTVQPFYKVQ-YKSPVNDIS-PTNDPNLIL 267
Query: 233 SAGDDCQLMIWDLR--TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
+ D+ ++I+D R +N+ Q+ + VN ++ N + + A+ S + + ++D++K
Sbjct: 268 ACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKVWDLKK 326
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
P HI+++H E + ++ + PN ++LAS++++R + V+DLN+IG+E +D DGP E
Sbjct: 327 FHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSE 386
Query: 351 LLFSHGGHKAKISDFSWN--KNDPWVISSVADDNTVQVWQMTDSI 393
L+FSHGGH ++DF+WN K I S ++DNT+Q WQ+ +
Sbjct: 387 LIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFWQLKSEL 431
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 130/405 (32%), Positives = 223/405 (55%)
Query: 5 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKF 64
++D D VE +F WK N+ LYD + LEWPSL+V + + + +++
Sbjct: 36 DEDEEED-VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENN---VLNQI 91
Query: 65 V-LGTHTSEDFPNFLMIADAVLPTKD--SESNVGGKNEN-------PVIPKVEIAQKIRV 114
V +GTHTS PNFL + D + P + E + NEN K I KI
Sbjct: 92 VCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKIAH 151
Query: 115 DGEVNRARCMP-QKPNLVGTKTSSCEVYVFDCAK-QAEKQQDDCDPDLRLKGHDKEGYGL 172
GEVNR + +P +K N V TK V++FD K + E D +P++ G+ +G+GL
Sbjct: 152 TGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFGL 211
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
+ P K+ Y+++ ++D I ++D + L K + + + ++S V D+S + NL
Sbjct: 212 DFQPIKK-YILTCANDGLINVYDYNTL-NTKTVQPFYKVQ-YKSPVNDIS-PTNDPNLIL 267
Query: 233 SAGDDCQLMIWDLR--TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
+ D+ ++I+D R +N+ Q+ + VN ++ N + + A+ S + + ++D++K
Sbjct: 268 ACADNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKVWDLKK 326
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
P HI+++H E + ++ + PN ++LAS++++R + V+DLN+IG+E +D DGP E
Sbjct: 327 FHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSE 386
Query: 351 LLFSHGGHKAKISDFSWN--KNDPWVISSVADDNTVQVWQMTDSI 393
L+FSHGGH ++DF+WN K I S ++DNT+Q WQ+ +
Sbjct: 387 LIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQFWQLKSEL 431
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 99/157 (63%), Positives = 124/157 (78%)
Query: 241 MIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI 297
MIWD R+N T + V AH EVN LSFNPY+E++LAT S+D TVAL+D+R + + LH
Sbjct: 1 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 60
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
SH +E+FQV+W P++ET+LASS DRRL VWDL++IG+EQ DAEDGPPELLF HGG
Sbjct: 61 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 120
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSIY 394
H AKISDFSWN N+PWVI SV++DN +QVWQM ++IY
Sbjct: 121 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 157
Score = 160 (61.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P + H E LS++P+ E L +GS D + LWD+ L K+ +H +E+H+
Sbjct: 13 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KL--KLHSFESHKDE 67
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKA-------------HEKEVNY 263
+ V W NE + S+G D +L +WDL + + Q A H +++
Sbjct: 68 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 127
Query: 264 LSFNPYNEWVLATASSDTTVALFDM 288
S+NP WV+ + S D + ++ M
Sbjct: 128 FSWNPNEPWVICSVSEDNIMQVWQM 152
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 104/293 (35%), Positives = 169/293 (57%)
Query: 105 KVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKG 164
K++ QK+ + E+ RAR MPQ N+V T EV +++ E + P
Sbjct: 90 KIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNL--DTETRYSHFAP------ 141
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
H K GYGLSW+P ++G LV+G+ DN +C+ D + +K + + +V DV WH
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDI---QKDIVNDVKWH 195
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKE-VNYLSFNPYNEWVLATASSDTTV 283
N NLF S +D + ++D R N+ + A +N L+F+P+ E ++A ++ + +
Sbjct: 196 QFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNI 255
Query: 284 ALFDMRKM---TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL 340
L D+RK+ + LH + H+E + +E+ P+H+ +LA+ + DRR+++WDL ++G+EQ
Sbjct: 256 NLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQ 315
Query: 341 ELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
+ DAEDG PEL H GH A +SD SW W+I SVADDN V +W+++ +
Sbjct: 316 QEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKL 368
Score = 189 (71.6 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 5 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKF 64
EQ ++EE+ +W+KN ++Y+ + L WPSLT+ W+P+ Y+ K
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPN----YTTTNGLIDAKL 58
Query: 65 VLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCM 124
+LGTHTS N L +A L ++ NV + K++ QK+ + E+ RAR M
Sbjct: 59 LLGTHTSNQSANQLKVASTQL---SADPNVKANS------KIKTVQKLENNAEICRARYM 109
Query: 125 PQKPNLVGTKTSSCEVYVFD 144
PQ N+V T EV +++
Sbjct: 110 PQDANIVATINGLGEVDLYN 129
Score = 114 (45.2 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 37/179 (20%), Positives = 77/179 (43%)
Query: 129 NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHD 188
NL + + VY+FD Q + + L++SPF E + G+
Sbjct: 200 NLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINS-------LAFSPFAENLVAIGNTS 252
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL-RT 247
+ I L D+ L ++ + +H H + + + ++ + + D +++IWDL +
Sbjct: 253 SNINLLDLRKLGENSGL--LHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKV 310
Query: 248 NQTQQRVKA-------------HEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV 293
+ QQ+ A H V+ LS+ P+ +W++ + + D V L+++ K +
Sbjct: 311 GEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKLI 369
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 104/293 (35%), Positives = 169/293 (57%)
Query: 105 KVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKG 164
K++ QK+ + E+ RAR MPQ N+V T EV +++ E + P
Sbjct: 90 KIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNL--DTETRYSHFAP------ 141
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
H K GYGLSW+P ++G LV+G+ DN +C+ D + +K + + +V DV WH
Sbjct: 142 HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDI---QKDIVNDVKWH 195
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKE-VNYLSFNPYNEWVLATASSDTTV 283
N NLF S +D + ++D R N+ + A +N L+F+P+ E ++A ++ + +
Sbjct: 196 QFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNI 255
Query: 284 ALFDMRKM---TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL 340
L D+RK+ + LH + H+E + +E+ P+H+ +LA+ + DRR+++WDL ++G+EQ
Sbjct: 256 NLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQ 315
Query: 341 ELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
+ DAEDG PEL H GH A +SD SW W+I SVADDN V +W+++ +
Sbjct: 316 QEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKL 368
Score = 189 (71.6 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 5 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKF 64
EQ ++EE+ +W+KN ++Y+ + L WPSLT+ W+P+ Y+ K
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPN----YTTTNGLIDAKL 58
Query: 65 VLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCM 124
+LGTHTS N L +A L ++ NV + K++ QK+ + E+ RAR M
Sbjct: 59 LLGTHTSNQSANQLKVASTQL---SADPNVKANS------KIKTVQKLENNAEICRARYM 109
Query: 125 PQKPNLVGTKTSSCEVYVFD 144
PQ N+V T EV +++
Sbjct: 110 PQDANIVATINGLGEVDLYN 129
Score = 114 (45.2 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 37/179 (20%), Positives = 77/179 (43%)
Query: 129 NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHD 188
NL + + VY+FD Q + + L++SPF E + G+
Sbjct: 200 NLFASVSEDSHVYLFDARDNKVVSQYYAESSNGINS-------LAFSPFAENLVAIGNTS 252
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL-RT 247
+ I L D+ L ++ + +H H + + + ++ + + D +++IWDL +
Sbjct: 253 SNINLLDLRKLGENSGL--LHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKV 310
Query: 248 NQTQQRVKA-------------HEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV 293
+ QQ+ A H V+ LS+ P+ +W++ + + D V L+++ K +
Sbjct: 311 GEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKLI 369
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 93/196 (47%), Positives = 128/196 (65%)
Query: 13 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSE 72
+ EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P +P D +A+H VLGTHTS+
Sbjct: 60 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 117
Query: 73 DFPNFLMIADAVLPTKDSESNVGG----KNE----NPVIPKVEIAQKIRVDGEVNRARCM 124
+ N L++A +P D++ + K E V K+E KI +GEVNRAR M
Sbjct: 118 E-QNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 125 PQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
PQ P+++ TKT S +V VFD K K +C+PDLRL+GH KEGYGLSW+ G+L
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 183 VSGSHDNKICLWDVSA 198
+S S D+ +CLWD++A
Sbjct: 237 LSASDDHTVCLWDINA 252
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 116/404 (28%), Positives = 199/404 (49%)
Query: 11 DQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHT 70
+Q+ E+ WKKN+ LY+L+++ L WPSL++ W+ + + ++ +LGTH
Sbjct: 18 NQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMES--ITEKAVLKNRLLLGTHA 75
Query: 71 SEDFPNFLMIADAVLPT------------KDSESNVGGKNENPVIPKVEIAQKIRVDGEV 118
+E PNFL +AD LP + +GG + K +I+Q+I +G+V
Sbjct: 76 AEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSC-KFQISQRILHNGDV 134
Query: 119 NRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFK 178
NR R MPQ PN++ T +S Y+FD K ++ P++ L GH KEG+GLSW+ +
Sbjct: 135 NRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFLPNISLIGHKKEGFGLSWNRQQ 194
Query: 179 EGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDD 237
LV+ ++D+KI WD++ ++D + + + + +S V DV +H + NL+ + D+
Sbjct: 195 NCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDN 254
Query: 238 CQLMIWDLRTNQT-QQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL- 295
I D R QT + VKA + + NP + A S + + L+D+R + +
Sbjct: 255 GIAFICDNRLQQTCSKTVKASNPLFS-VRHNPSIATLFALGS-EQDLQLWDLRNLNKSVF 312
Query: 296 ---HILSSHTEEV--------FQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA 344
LS + +V + W H + S+ + VW+ N+
Sbjct: 313 NTSEDLSDNRLKVPSRLTLGGTSLSWSWRHSGRIVSACQEY-CYVWNFNKAN-------- 363
Query: 345 EDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
P E F H GHK +++ ++ + I+SVADDN + +W+
Sbjct: 364 ---PLE--FVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 402
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 234 (87.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 58/180 (32%), Positives = 86/180 (47%)
Query: 10 LDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTH 69
+D E +W+KNTPFLY ++ H L+WPSLTV ++ + + + +K +LGTH
Sbjct: 34 VDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGD-NSFKSKLNYFTNKVLLGTH 92
Query: 70 TSEDFPNFLMIADAVLPT---KDSE---SNVGG------KNENPVIPKVEIAQKIRVDGE 117
TS ++ I + P K+ N G K + +P E+ K+ GE
Sbjct: 93 TSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGE 152
Query: 118 VNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWS 175
V RA +P + T+TS+ +FD K D C P + LKGH EG GL W+
Sbjct: 153 VIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 220 (82.5 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 52/191 (27%), Positives = 98/191 (51%)
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ--TQQRV--KAHEKEVNYLSFNPYN 270
++ D+ +H K N G D+ + I+D+R T+ + + + +N SF+ ++
Sbjct: 387 KTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFS 446
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
E++ + SD ++++DMR L L HT+ + ++++ + AS +DD +W
Sbjct: 447 EYIFSCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIW 506
Query: 331 DLNRIGDEQ-LELD-AEDG--------PPELLFSHGGHKAKISDFSWNKNDPWVISSVAD 380
D++R + Q L L ED P +LLF HGGH I D +W ++ + I++V
Sbjct: 507 DISRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGV 566
Query: 381 DNTVQVWQMTD 391
DN++ VW + +
Sbjct: 567 DNSIHVWHLNE 577
Score = 77 (32.2 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 173 SWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
S+ F E Y+ S G D I +WD + +K +++ + H + + + + + +F
Sbjct: 441 SFDNFSE-YIFSCGYSDGLISVWD---MRYNK--ESLLKLKYHTQGINRIKFGMISSGIF 494
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVN-YLSFNPYNEWVL 274
S DD IWD+ N Q + + E + Y + NP + +L
Sbjct: 495 ASCSDDGTACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLL 538
Score = 69 (29.3 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 34/162 (20%), Positives = 64/162 (39%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L S S D ICLWD++ + D Y ++S + +++K ++ + L
Sbjct: 326 LASCSVDGSICLWDINKGTKSN--DVPRTYGLNKSG-KTADYNIK---IYENTPTLSPLC 379
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK---MTVPLHIL 298
W + +T N + F+P L + ++++D+RK T
Sbjct: 380 TWYNKNTKTA---------FNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICF 430
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL 340
+ + E + +D E + + D + VWD+ R E L
Sbjct: 431 NDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDM-RYNKESL 471
Score = 68 (29.0 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 156 CDPDLRLKGHDKEGYGLSWS------PFK-----EGY----LVSGSHDNKIC-LWDVSAL 199
C P + LKGH EG GL W+ +K +GY L +G D+ I ++ V +
Sbjct: 193 CYPQMILKGHTNEGSGLCWNVNRVYDSYKNPNIFDGYMEKVLYTGKEDDSIKDIYSVKDM 252
Query: 200 AQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGS-------AGDDCQLMIWDLRTNQTQQ 252
K D + + + VED++ +++ G+ A +D + + DL T ++
Sbjct: 253 YSLK--DTFSLKDTNS--VEDIASSKDIQSVRGAYSIKELEAHNDLDI-VNDLDTEESND 307
Query: 253 RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+ N N +LA+ S D ++ L+D+ K T
Sbjct: 308 SIS--NSNTFGTEVNTTN-LLLASCSVDGSICLWDINKGT 344
Score = 59 (25.8 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVS 197
L+LK H + + + G S S D C+WD+S
Sbjct: 472 LKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDIS 509
Score = 48 (22.0 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 208 MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL 245
+ V+ H + D++W N + G D + +W L
Sbjct: 538 LFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 317 VLASSADDRRLMVWDLNR 334
+LAS + D + +WD+N+
Sbjct: 325 LLASCSVDGSICLWDINK 342
Score = 41 (19.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVS 197
GH Y L+W+ + + DN I +W ++
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 234 (87.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 58/180 (32%), Positives = 86/180 (47%)
Query: 10 LDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTH 69
+D E +W+KNTPFLY ++ H L+WPSLTV ++ + + + +K +LGTH
Sbjct: 34 VDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGD-NSFKSKLNYFTNKVLLGTH 92
Query: 70 TSEDFPNFLMIADAVLPT---KDSE---SNVGG------KNENPVIPKVEIAQKIRVDGE 117
TS ++ I + P K+ N G K + +P E+ K+ GE
Sbjct: 93 TSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGE 152
Query: 118 VNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWS 175
V RA +P + T+TS+ +FD K D C P + LKGH EG GL W+
Sbjct: 153 VIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 220 (82.5 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 52/191 (27%), Positives = 98/191 (51%)
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ--TQQRV--KAHEKEVNYLSFNPYN 270
++ D+ +H K N G D+ + I+D+R T+ + + + +N SF+ ++
Sbjct: 387 KTAFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFS 446
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
E++ + SD ++++DMR L L HT+ + ++++ + AS +DD +W
Sbjct: 447 EYIFSCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIW 506
Query: 331 DLNRIGDEQ-LELD-AEDG--------PPELLFSHGGHKAKISDFSWNKNDPWVISSVAD 380
D++R + Q L L ED P +LLF HGGH I D +W ++ + I++V
Sbjct: 507 DISRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGV 566
Query: 381 DNTVQVWQMTD 391
DN++ VW + +
Sbjct: 567 DNSIHVWHLNE 577
Score = 77 (32.2 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 173 SWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
S+ F E Y+ S G D I +WD + +K +++ + H + + + + + +F
Sbjct: 441 SFDNFSE-YIFSCGYSDGLISVWD---MRYNK--ESLLKLKYHTQGINRIKFGMISSGIF 494
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVN-YLSFNPYNEWVL 274
S DD IWD+ N Q + + E + Y + NP + +L
Sbjct: 495 ASCSDDGTACIWDISRNNNTQILPLQKTEDDIYNNPNPVPKQLL 538
Score = 69 (29.3 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 34/162 (20%), Positives = 64/162 (39%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L S S D ICLWD++ + D Y ++S + +++K ++ + L
Sbjct: 326 LASCSVDGSICLWDINKGTKSN--DVPRTYGLNKSG-KTADYNIK---IYENTPTLSPLC 379
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK---MTVPLHIL 298
W + +T N + F+P L + ++++D+RK T
Sbjct: 380 TWYNKNTKTA---------FNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFFTKAEICF 430
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL 340
+ + E + +D E + + D + VWD+ R E L
Sbjct: 431 NDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDM-RYNKESL 471
Score = 68 (29.0 bits), Expect = 8.4e-20, Sum P(2) = 8.4e-20
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 156 CDPDLRLKGHDKEGYGLSWS------PFK-----EGY----LVSGSHDNKIC-LWDVSAL 199
C P + LKGH EG GL W+ +K +GY L +G D+ I ++ V +
Sbjct: 193 CYPQMILKGHTNEGSGLCWNVNRVYDSYKNPNIFDGYMEKVLYTGKEDDSIKDIYSVKDM 252
Query: 200 AQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGS-------AGDDCQLMIWDLRTNQTQQ 252
K D + + + VED++ +++ G+ A +D + + DL T ++
Sbjct: 253 YSLK--DTFSLKDTNS--VEDIASSKDIQSVRGAYSIKELEAHNDLDI-VNDLDTEESND 307
Query: 253 RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+ N N +LA+ S D ++ L+D+ K T
Sbjct: 308 SIS--NSNTFGTEVNTTN-LLLASCSVDGSICLWDINKGT 344
Score = 59 (25.8 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVS 197
L+LK H + + + G S S D C+WD+S
Sbjct: 472 LKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDIS 509
Score = 48 (22.0 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 208 MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL 245
+ V+ H + D++W N + G D + +W L
Sbjct: 538 LFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 317 VLASSADDRRLMVWDLNR 334
+LAS + D + +WD+N+
Sbjct: 325 LLASCSVDGSICLWDINK 342
Score = 41 (19.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVS 197
GH Y L+W+ + + DN I +W ++
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 73/200 (36%), Positives = 114/200 (57%)
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ-QRV-KAHEKEVNYLSFN 267
+Y H+ VEDV++ + F S GDD LM+WD RT + +V KAH+ +++ + +N
Sbjct: 267 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWN 326
Query: 268 PYNEWVLATASSDTTVALFDMRKMTV-----PLHILSSHTEEVFQVEWDPNHETVLASSA 322
P++ ++ T S+D TV +FD R +T P++ H V V+W P+ +V SSA
Sbjct: 327 PHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSA 386
Query: 323 DDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADD- 381
+D L +WD +R+G + A P L F H GH+ K+ DF W+ +PW I SV+D+
Sbjct: 387 EDGLLNIWDCDRVGKKSER--ATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNC 444
Query: 382 ------NTVQVWQMTDSIYR 395
T+Q+W+M+D IYR
Sbjct: 445 ESIGGGGTLQIWRMSDLIYR 464
Score = 260 (96.6 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 84/282 (29%), Positives = 127/282 (45%)
Query: 6 QDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFV 65
Q + V++ ++ WK P LYD V+H L WPSL+ W P Q S +
Sbjct: 47 QQSQKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSK-----TQRLY 101
Query: 66 LGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMP 125
L T+ PN L+IA+ T + + N K +P + K + I GEVNR R +P
Sbjct: 102 LSEQTNGSVPNTLVIANC--ETVNRQLNE--KAHSPFVKKYKT---IIHPGEVNRIRELP 154
Query: 126 QKPNLVGTKTSSCEVYVFDCAKQAEKQQ----DDCDPDLRLKGH-DKEGYGLSWSPFKEG 180
Q +V T T S ++ +++ Q ++ D PDL L GH D + L+ P E
Sbjct: 155 QNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP-TEP 213
Query: 181 YLVSGSHDNKICLWDV---------------SALAQ-----DKV----IDAMHVYEAHES 216
+++SG D + LW++ S+ Q DK + +Y H+
Sbjct: 214 FVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKD 273
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHE 258
VEDV++ + F S GDD LM+WD RT T +K +
Sbjct: 274 TVEDVAFCPSSAQEFCSVGDDSCLMLWDARTG-TSPAMKVEK 314
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 158 PDLRL-KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHES 216
P +++ K HD + + + W+P +++GS DN + ++D L + V ++ +E H +
Sbjct: 308 PAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRA 367
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQR 253
V V W ++FGS+ +D L IWD R + +R
Sbjct: 368 AVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSER 405
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 94/322 (29%), Positives = 155/322 (48%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQ 148
DS+S+ +E P +++ +++ G VNR R MPQ ++ + S V V+D +
Sbjct: 134 DSDSDDDDGDEASKTPNIQV-RRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSH 192
Query: 149 ----AEKQQDDCD---------PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWD 195
AE + + D P + GH EGY + WSP G L+SG + I LW+
Sbjct: 193 LNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWE 252
Query: 196 VSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ-RV 254
++ + +D + + H + VED+ W EN+F S D + +WD+R ++
Sbjct: 253 PASGSW--AVDPIP-FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSF 309
Query: 255 KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM----TVPLHILSSHTEEVFQVEW 310
KAH +VN +S+N +LA+ S D T ++ D+R + V H H + +EW
Sbjct: 310 KAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHF-EYHKHPITSIEW 368
Query: 311 DPNHETVLASSADDRRLMVWDLNRIGDEQLELD-----------AEDGPPELLFSHGGHK 359
+ + LA ++ D +L +WDL+ DE+ E + +D PP+LLF H G K
Sbjct: 369 SAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQK 428
Query: 360 AKISDFSWNKNDPWVISSVADD 381
+ + W+ P +I S A D
Sbjct: 429 -DLKELHWHNQIPGMIISTAGD 449
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 257 HEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET 316
H V L ++P E V A+ S D +VA++D+R P +H +V + W+
Sbjct: 268 HTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASC 327
Query: 317 VLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVIS 376
+LAS +DD + DL I G ++ HK I+ W+ ++ ++
Sbjct: 328 MLASGSDDGTFSIRDLRLI----------KGGDAVVAHFEYHKHPITSIEWSAHEASTLA 377
Query: 377 SVADDNTVQVWQMT 390
+ DN + +W ++
Sbjct: 378 VTSGDNQLTIWDLS 391
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 96/322 (29%), Positives = 159/322 (49%)
Query: 97 KNENPV-IPKVEIAQKIRV---DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAE-- 150
K EN P + I + +GE NRAR +PQ P+++ +S +Y+FD K
Sbjct: 107 KPENSTRFPSKHLVNDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTR 166
Query: 151 -KQQDDCDP-DLRLKG-HD---------------KEGYGLSWSPFKEGYLVSGSHDN-KI 191
+Q P + +L G H E L+W+ +E L+S SH N ++
Sbjct: 167 IRQSKISHPFETKLFGSHGVIQDVEAMDTSSADINEATSLAWNLQQEALLLS-SHSNGQV 225
Query: 192 CLWDVSALAQDK-VIDAMHV-YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ 249
+WD+ + + +ID V + + V DV+W +++LF + + + + DLRT +
Sbjct: 226 QVWDIKQYSHENPIIDLPLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKK 285
Query: 250 T--QQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQ 307
Q + H+ VN FN N +LA+A S+ + L+D+R M H V
Sbjct: 286 EKLQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVST 345
Query: 308 VEWDPNHETVLASSA-DDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFS 366
+EW PN +TVLA++ +D + +WD + E E +F+HGGH ++D S
Sbjct: 346 LEWSPNFDTVLATAGQEDGLVKLWDTS----------CE----ETIFTHGGHMLGVNDIS 391
Query: 367 WNKNDPWVISSVADDNTVQVWQ 388
W+ +DPW++ SVA+DN+V +W+
Sbjct: 392 WDAHDPWLMCSVANDNSVHIWK 413
Score = 158 (60.7 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 48/158 (30%), Positives = 74/158 (46%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
E +D ++E ++ WKKNT LYD + ++ +WPSLT + P D T H+
Sbjct: 11 EASSIPID-LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPD------LDTTSDEHR 63
Query: 64 FVLGTHTSEDFPNFLMIADAVLPT----KDSESN------VGGKNENPV-IPKVEIAQKI 112
+L + TS P I + + T K S N + K EN P + I
Sbjct: 64 ILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDI 123
Query: 113 RV---DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAK 147
+ +GE NRAR +PQ P+++ +S +Y+FD K
Sbjct: 124 SIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTK 161
Score = 52 (23.4 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 312 PNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPEL-LF-SHG---------GHKA 360
P + ++A ++ D + ++D + G ++ P E LF SHG A
Sbjct: 139 PQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMDTSSA 198
Query: 361 KISD---FSWNKNDPWVISSVADDNTVQVWQM 389
I++ +WN ++ S + VQVW +
Sbjct: 199 DINEATSLAWNLQQEALLLSSHSNGQVQVWDI 230
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 85/304 (27%), Positives = 157/304 (51%)
Query: 101 PVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQ---DDCD 157
P + K + QKI G+VN+ R MPQKPN++ + + + +++ + + DD D
Sbjct: 143 PSLNKTKTLQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTILDDTD 202
Query: 158 ---PDLRLKG-H---DKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
+RL H + + + W+ EG L+S + + L+D+ + + ++ +
Sbjct: 203 LSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQY- 261
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAH-EKEVNYLSFNPY 269
+E + V D+ W +++LF +A D+ L ++D R NQ+ A+ VN ++ NP
Sbjct: 262 WENNAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTR-NQSAAVQNANIGNSVNSVACNPG 320
Query: 270 NEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMV 329
LAT S+ + ++D+R L L H++ V Q++W+P +L SS+ D + +
Sbjct: 321 YATGLATGDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKL 380
Query: 330 WDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D++ D+ +F+H GH ++DF W+ DPW+++SVADDN++ VW+
Sbjct: 381 HDMSN--------DST------IFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVWKP 426
Query: 390 TDSI 393
T S+
Sbjct: 427 THSV 430
Score = 154 (59.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 5 EQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQ-----PYSADPTF 59
E+ A ++ ++ + VWKKN P LYD +V++ L WPSL+V + P +
Sbjct: 31 EESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHINDLGENKNEEQI 90
Query: 60 AVHKFVLGTHTSEDFPNFLMIADAVLPT-KDSESNV-------GGKNEN-----PVIPKV 106
+ +LGT T + + I +P+ K+ N+ + E P + K
Sbjct: 91 IAQRILLGTFTLGQAIDHISILQ--IPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKT 148
Query: 107 EIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFD 144
+ QKI G+VN+ R MPQKPN++ + + + +++
Sbjct: 149 KTLQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYE 186
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 330 (121.2 bits), Expect = 8.1e-30, P = 8.1e-30
Identities = 91/309 (29%), Positives = 149/309 (48%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQ 148
D ES+ + V P++++A I +G VNR R M Q+ N+V T + + VY+++ A
Sbjct: 168 DEESDDEDDEDKDVDPELQLAF-INHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANH 226
Query: 149 AEKQQDDC------DPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD 202
+ ++ P + H EGY L WSP G L +G +N I + + S
Sbjct: 227 LKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWK 286
Query: 203 KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVN 262
A ++ H VED+ W E +F S D + IWD+R + VKAH +VN
Sbjct: 287 TDTQA---FKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVN 343
Query: 263 YLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHET-VLA 319
+S++ E++L + D + ++D+R K P+ HT + +EW+P E+ V+
Sbjct: 344 VISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIV 403
Query: 320 SSADDRRLMVWDLNRIGDEQLELDA----EDG---PPELLFSHGGHKAKISDFSWNKNDP 372
SS+DD+ + +WD + D + +A +D PP+L F H G I + W+ P
Sbjct: 404 SSSDDQ-VTIWDFSLEEDTEEFTNANANPDDDFQYPPQLFFIHQGQH-DIKEVHWHPQIP 461
Query: 373 WVISSVADD 381
V S + D
Sbjct: 462 HVAISTSID 470
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 67/258 (25%), Positives = 109/258 (42%)
Query: 150 EKQQD-DCDPDLRLKGHDKEG-YGLSWSPFKEGYLVSGSHDNK-ICLWDVS----ALAQD 202
E +D D DP+L+L + G S ++ +V+ DN+ + +W+++ AL +
Sbjct: 174 EDDEDKDVDPELQLAFINHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNE 233
Query: 203 KVIDA----MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ-----QR 253
V +H H + W K + DC I+ +++ Q
Sbjct: 234 TVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATG--DCNNSIFVTNASESTWKTDTQA 291
Query: 254 VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPN 313
K H + V + ++P E V A+ S D TV ++D+RK P + +HT +V + W N
Sbjct: 292 FKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPK-PAITVKAHTADVNVISWSRN 350
Query: 314 HETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNK-NDP 372
E +L S DD VWDL +D P F + H I+ WN +
Sbjct: 351 VEYLLVSGCDDGSFRVWDLRAF---------KDNSPVSDFKY--HTGPITSIEWNPYEES 399
Query: 373 WVISSVADDNTVQVWQMT 390
VI S +DD V +W +
Sbjct: 400 QVIVSSSDDQ-VTIWDFS 416
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 301 (111.0 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 86/345 (24%), Positives = 153/345 (44%)
Query: 63 KFVLGTHTSEDFPNFLMIADAVLPTK--DSESNVGGKNENPVIPKVEIAQKIRVDGEVNR 120
KF++GT+ N+L + LP+ + ++ ++ ++ + + E+N+
Sbjct: 118 KFLIGTNAINKSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINK 177
Query: 121 ARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEG 180
+ P VG + ++ D+ D + K H + G L W G
Sbjct: 178 LKVSPNGSLAVGFSADGV-IRSYNL--------DNFD-SVDYKYHKQGGIALDWVD-NNG 226
Query: 181 YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQL 240
+L SGS+D +I LW V DK + +++ H + D+S +K ++LFGS DD
Sbjct: 227 FL-SGSNDAQIALWQV-----DKSSTPLQLFKGHHGAINDIS-SIKEKHLFGSVSDDSTT 279
Query: 241 MIWDLRTNQTQQR--VKAHEKEV-NYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI 297
D R N T + + N + F+P + + AT D V+L+D+R + P
Sbjct: 280 QFHDTRVNATDINPVITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRK 339
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA-EDGP-------- 348
H + V Q++WD N+ +L S D+R++ WDL + ++ DA +G
Sbjct: 340 FYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQ 399
Query: 349 -----PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
P L + HGGH + +DF + + SV DD +++W+
Sbjct: 400 AVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWK 444
Score = 164 (62.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
EEQ V EEF +WKK P LYD I + L+ PSL W+P+ S + K
Sbjct: 63 EEQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTT----SVSQSDLELK 118
Query: 64 FVLGTHTSEDFPNFLMIADAVLPTK--DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRA 121
F++GT+ N+L + LP+ + ++ ++ ++ + + E+N+
Sbjct: 119 FLIGTNAINKSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINKL 178
Query: 122 RCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGY 181
+ P VG + ++ D+ D + K H + G L W G+
Sbjct: 179 KVSPNGSLAVGFSADGV-IRSYNL--------DNFD-SVDYKYHKQGGIALDWVD-NNGF 227
Query: 182 LVSGSHDNKICLWDV 196
L SGS+D +I LW V
Sbjct: 228 L-SGSNDAQIALWQV 241
Score = 68 (29.0 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 28/131 (21%), Positives = 49/131 (37%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
+ H V + W N ++ S G D +++ WDL K +++ Y
Sbjct: 340 FYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDL---------KNLDEDFTYPD----- 385
Query: 271 EWVLATASSDTTVALFDMRKMTVPL--HILSSHTEEVFQVEWDPNHETVLASSADDRRLM 328
AT++ T + T P ++ HT + P + + S DD+ L
Sbjct: 386 ----ATSNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLE 441
Query: 329 VWDLNRI-GDE 338
+W + GDE
Sbjct: 442 IWKPKSLPGDE 452
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 301 (111.0 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 86/345 (24%), Positives = 153/345 (44%)
Query: 63 KFVLGTHTSEDFPNFLMIADAVLPTK--DSESNVGGKNENPVIPKVEIAQKIRVDGEVNR 120
KF++GT+ N+L + LP+ + ++ ++ ++ + + E+N+
Sbjct: 118 KFLIGTNAINKSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINK 177
Query: 121 ARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEG 180
+ P VG + ++ D+ D + K H + G L W G
Sbjct: 178 LKVSPNGSLAVGFSADGV-IRSYNL--------DNFD-SVDYKYHKQGGIALDWVD-NNG 226
Query: 181 YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQL 240
+L SGS+D +I LW V DK + +++ H + D+S +K ++LFGS DD
Sbjct: 227 FL-SGSNDAQIALWQV-----DKSSTPLQLFKGHHGAINDIS-SIKEKHLFGSVSDDSTT 279
Query: 241 MIWDLRTNQTQQR--VKAHEKEV-NYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI 297
D R N T + + N + F+P + + AT D V+L+D+R + P
Sbjct: 280 QFHDTRVNATDINPVITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRK 339
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA-EDGP-------- 348
H + V Q++WD N+ +L S D+R++ WDL + ++ DA +G
Sbjct: 340 FYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQ 399
Query: 349 -----PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
P L + HGGH + +DF + + SV DD +++W+
Sbjct: 400 AVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWK 444
Score = 164 (62.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 4 EEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHK 63
EEQ V EEF +WKK P LYD I + L+ PSL W+P+ S + K
Sbjct: 63 EEQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTT----SVSQSDLELK 118
Query: 64 FVLGTHTSEDFPNFLMIADAVLPTK--DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRA 121
F++GT+ N+L + LP+ + ++ ++ ++ + + E+N+
Sbjct: 119 FLIGTNAINKSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNFKVVTQWKQTQEINKL 178
Query: 122 RCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGY 181
+ P VG + ++ D+ D + K H + G L W G+
Sbjct: 179 KVSPNGSLAVGFSADGV-IRSYNL--------DNFD-SVDYKYHKQGGIALDWVD-NNGF 227
Query: 182 LVSGSHDNKICLWDV 196
L SGS+D +I LW V
Sbjct: 228 L-SGSNDAQIALWQV 241
Score = 68 (29.0 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 28/131 (21%), Positives = 49/131 (37%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
+ H V + W N ++ S G D +++ WDL K +++ Y
Sbjct: 340 FYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDL---------KNLDEDFTYPD----- 385
Query: 271 EWVLATASSDTTVALFDMRKMTVPL--HILSSHTEEVFQVEWDPNHETVLASSADDRRLM 328
AT++ T + T P ++ HT + P + + S DD+ L
Sbjct: 386 ----ATSNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLE 441
Query: 329 VWDLNRI-GDE 338
+W + GDE
Sbjct: 442 IWKPKSLPGDE 452
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 296 (109.3 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 88/314 (28%), Positives = 141/314 (44%)
Query: 87 TKDSESNVGGKNENP-VIPKVEIAQKIRVDGEVNRARCMPQ-KPNLVGTKTSSCEVYVFD 144
+ D ES+ +E+ P++E+A G +NR R + + L + +V +FD
Sbjct: 133 SSDEESDEDEDDEDEDKKPQLELAMMPHYGG-INRVRVTQRGEQTLAAVWSEKGQVEIFD 191
Query: 145 CAKQAE------------KQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKIC 192
Q E KQ+ + P GH EG+ + WSP G +VSG I
Sbjct: 192 LRLQLEAVHNSTAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIH 251
Query: 193 LWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT--NQT 250
+W+ K ID + +H VED+ W +F S D + IWD+R N
Sbjct: 252 VWEPQEGGTWK-ID-QRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSM 309
Query: 251 QQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQV 308
+AH +VN +S+N ++L+ D + ++D+R+ P+ H+ V V
Sbjct: 310 LSANEAHSSDVNVISWNRTEPFILS-GGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSV 368
Query: 309 EWDPNHETVLASSADDRRLMVWDLNRIGDE---QLELDAEDGPPELLFSHGGHKAKISDF 365
+W P +V A+S D + WDL+ + Q E D + PP+LLF H G K ++ +
Sbjct: 369 QWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAE-DVKQLPPQLLFLHQGQK-EVKEL 426
Query: 366 SWNKNDPWVISSVA 379
W+ P V+ S A
Sbjct: 427 HWHPQIPGVLISTA 440
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 48/201 (23%), Positives = 86/201 (42%)
Query: 199 LAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQ--LMIWDLRTNQT----QQ 252
+ Q+K + + H S + W K S DC+ + +W+ + T Q+
Sbjct: 209 IKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSG--DCKKNIHVWEPQEGGTWKIDQR 266
Query: 253 RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSS---HTEEVFQVE 309
+H K V L ++P V A+ S D ++ ++D+R P +LS+ H+ +V +
Sbjct: 267 PFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIR--APPNSMLSANEAHSSDVNVIS 324
Query: 310 WDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNK 369
W+ +L S DD L VWDL + + G P F H A ++ W+
Sbjct: 325 WNRTEPFIL-SGGDDGLLKVWDLRQF---------QSGRPVASFKQ--HSAPVTSVQWSP 372
Query: 370 NDPWVISSVADDNTVQVWQMT 390
D V ++ D+ + W ++
Sbjct: 373 VDSSVFAASGADDVISQWDLS 393
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 291 (107.5 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 79/247 (31%), Positives = 117/247 (47%)
Query: 146 AKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVI 205
AKQ E Q + P GH +EG+ + WSP +G L +G I +W KV
Sbjct: 204 AKQYE--QSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKV- 260
Query: 206 DAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV----KAHEKEV 261
D + H VED+ W ++ S D + IWD R + + + AH+ +V
Sbjct: 261 DQRPL-AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDV 319
Query: 262 NYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHETVLA 319
N +S+N NE +A+ D + ++D+R+ P+ HT+ + VEW P TVLA
Sbjct: 320 NVISWNR-NEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLA 378
Query: 320 SSADDRRLMVWDLNRIGDEQLELDA---EDG----PPELLFSHGGHKAKISDFSWNKNDP 372
S DD ++ +WDL D +D ED PP+LLF H G K +I + W+ P
Sbjct: 379 SGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQK-EIKELHWHPQLP 437
Query: 373 WVISSVA 379
V+ S A
Sbjct: 438 GVLLSTA 444
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 257 HEKEVNYLSFNPYNEWVLATASSDTTVALFD-MRKMT--VPLHILSSHTEEVFQVEWDPN 313
H++E + ++P + VLAT + ++ + T V L+ H++ V ++W PN
Sbjct: 221 HQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPN 280
Query: 314 HETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPW 373
+VLAS + D+ + +WD + L ED H++ ++ SWN+N+P+
Sbjct: 281 ERSVLASCSVDKTIRIWDCRASPQKACMLTCEDA----------HQSDVNVISWNRNEPF 330
Query: 374 VISSVADDNTVQVWQM 389
+ S DD + +W +
Sbjct: 331 IASG-GDDGYLHIWDL 345
>UNIPROTKB|Q5JNZ6 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000122 HOGENOM:HOG000160330 EMBL:AL929302 UniGene:Hs.495755
HGNC:HGNC:9890 ChiTaRS:RBBP7 SMR:Q5JNZ6 Ensembl:ENST00000425696
Uniprot:Q5JNZ6
Length = 85
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 48/68 (70%), Positives = 58/68 (85%)
Query: 327 LMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQV 386
L VWDL++IG+EQ DAEDGPPELLF HGGH AKISDFSWN N+PWVI SV++DN +Q+
Sbjct: 1 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI 60
Query: 387 WQMTDSIY 394
WQM ++IY
Sbjct: 61 WQMAENIY 68
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 284 (105.0 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 86/315 (27%), Positives = 147/315 (46%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRAR--CMPQKPNLVGTKTSSCEVYVFDCA 146
D S+ E+P++ I+ K + V AR K +L+ + + +V+++D A
Sbjct: 160 DDASDNSDVEEDPILEHKSISTKGACN-RVRSARRPANSSKESLLASFHETGKVHIWDIA 218
Query: 147 KQAEK--------QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSA 198
+ + P + H EGY L WSPF E L+SG + N+I L S
Sbjct: 219 PHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPF-EYSLLSGDNANEIFLTKYSN 277
Query: 199 LAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR--VKA 256
D+ + +H + VED+ W +N+F S D IWD+R Q V A
Sbjct: 278 GGWQT--DSSP-FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNA 334
Query: 257 HEK-EVNYLSFNPYNEWVLATASSDTTVALFDMRKM------TVPLHILSSHTEEVFQVE 309
H +VN LS+N +LAT + + +++D+R + P+ H ++ +E
Sbjct: 335 HPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIE 394
Query: 310 WDPNHETVLASSADDRRLMVWDLN-RIGDEQLELDAEDG----PPELLFSHGGHKAKISD 364
W PN ++V+ D ++ +WDL+ + +E+ + A +G PP+L+F H G + +I +
Sbjct: 395 WHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQ-EIKE 453
Query: 365 FSWNKNDPWVISSVA 379
W++ P I S A
Sbjct: 454 MHWHRQIPGTIVSTA 468
Score = 181 (68.8 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 91/351 (25%), Positives = 151/351 (43%)
Query: 25 PFLYDLIVSHPLEWPSLTVHWVP-SPPQPYSADPTFAVHKFVL--GTHTSEDFPNFLMIA 81
P +Y+++ + ++WP L+ + S + A P H+ L G+ + N L +
Sbjct: 91 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWP----HQMYLVGGSQALDSNDNELTVM 146
Query: 82 --DAVLPTKDSESNVGGKN----ENPVIPKVEIAQKIRVDGEVNRARCM--P---QKPNL 130
+ T+ E++ N E+P++ I+ K G NR R P K +L
Sbjct: 147 KLSQLYKTQHDENDDASDNSDVEEDPILEHKSISTK----GACNRVRSARRPANSSKESL 202
Query: 131 VGTKTSSCEVYVFDCAKQAEK--------QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYL 182
+ + + +V+++D A + + P + H EGY L WSPF E L
Sbjct: 203 LASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPF-EYSL 261
Query: 183 VSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI 242
+SG + N+I L S D+ + +H + VED+ W +N+F S D I
Sbjct: 262 LSGDNANEIFLTKYSNGGWQT--DSSP-FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRI 318
Query: 243 WDLRTNQTQQR--VKAHEK-EVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILS 299
WD+R Q V AH +VN LS+N +LAT + + +++D+R L S
Sbjct: 319 WDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRS----LKSSS 374
Query: 300 SHTEEVFQVEWD--PNHETVLASSADDRRLMVWDLNRIG--DEQLELDAED 346
S V +W P + + D +V N+I D +ELD E+
Sbjct: 375 SVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEE 425
Score = 134 (52.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 52/229 (22%), Positives = 94/229 (41%)
Query: 178 KEGYLVSGSHDNKICLWDVS----------ALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
KE L S K+ +WD++ + K ++ H++ + W
Sbjct: 199 KESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPFE 258
Query: 228 ENLFGSAGDDCQLMIWDLRTN---QTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
+L +GD+ + +N QT +H V L ++P + V ++ S D T
Sbjct: 259 YSLL--SGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTF 316
Query: 284 ALFDMR-KMTVPLHILSSHTE-EVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++D+R K +++H +V + W+ +LA+ AD+ VWDL L+
Sbjct: 317 RIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLR-----SLK 371
Query: 342 LDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
+ P F H+A I W+ N+ VI V DN + +W ++
Sbjct: 372 SSSSVATPVASFKW--HRAPIYSIEWHPNEDSVIGVVGADNQISLWDLS 418
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 273 (101.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 94/399 (23%), Positives = 181/399 (45%)
Query: 25 PFLYDLIVSHPLEWPSLTVHWVPSP--PQPYSADPTFAVHKFVLGTHTSEDFPNFLMIAD 82
P +Y+++ + + WP LT+ +P + + + + + E+ L +++
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSN 174
Query: 83 AV--LPTKDSESNVGGKN-ENPVIPKVEIAQKIRVDGEVNRARCMP----QKPNLVGTKT 135
L D+E ++ E+ V P +E + I + NR + P + L T +
Sbjct: 175 LAKTLLKDDNEGEDDEEDDEDDVDPVIE-NENIPLRDTTNRLKVSPFAISNQEVLTATMS 233
Query: 136 SSCEVYVFDCAKQAEK--------QQDDCDPDLRLKGHDK-EGYGLSWSPF-KEGYLVSG 185
+ +VY+++ A Q++ + P +K H EGYGL WSP K G L+SG
Sbjct: 234 ENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSG 293
Query: 186 SHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL 245
+I + V D ++ +ED+ W +F +AG D + IWD
Sbjct: 294 DCSGQI--YFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDT 351
Query: 246 RTNQTQQR--VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV-------PLH 296
R+ + + VKA +VN +S++ ++LA+ + T ++D+R+ T P+
Sbjct: 352 RSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVA 411
Query: 297 ILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN-RIGDEQLELDA------EDGPP 349
H + + ++P E+++A ++D + +WDL+ DE+++ A ++ PP
Sbjct: 412 QYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPP 471
Query: 350 ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+LLF H + ++ D W+K P + S D + VW+
Sbjct: 472 QLLFVHW--QKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 507
Score = 42 (19.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 2 AAEEQDASLDQVEEEFT 18
A+EEQDA + +EE+ +
Sbjct: 30 ASEEQDAPKNDLEEQLS 46
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 73/288 (25%), Positives = 127/288 (44%)
Query: 103 IPKVEIAQKIRVD--GEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCD-PD 159
IP +IR D G+ C + + + Y + +++ + D P
Sbjct: 162 IPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPL 221
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
G KEGYGL+WS K G L +G KI LW + Q V + H+ VE
Sbjct: 222 FTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAV--GANPLTGHKKSVE 279
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV----KAHEKEVNYLSFNPYNEWVLA 275
D++W L S D + +WD R+ V KAHE +VN +S+N + E ++
Sbjct: 280 DLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIV 338
Query: 276 TASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
+ D + ++ ++ + P+ + H + V+W P+ T +S +D + +WD+
Sbjct: 339 SGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIA 398
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADD 381
D Q + E PP+L+F H G ++ + W++ P + + + D
Sbjct: 399 TEADGQTNI--EGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 443
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 221 VSWH-LKNENLFGSAGDDCQ-LMIWDLRTNQTQQRVKA-----HEKEVNYLSFNPYNEWV 273
++W LK +L + GD + + +W ++ Q V A H+K V L+++P +
Sbjct: 234 LAWSSLKTGDL--ATGDIIKKIYLWQMKEGG-QWAVGANPLTGHKKSVEDLAWSPTETGL 290
Query: 274 LATASSDTTVALFDMR---KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
LA+ S+D ++ L+D R K + +H +V + W+ HE ++ S DD L +W
Sbjct: 291 LASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWN-RHENLIVSGGDDGELKIW 349
Query: 331 DLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
L I + G P LF + H + I+ W+ ++ + +D+ +W +
Sbjct: 350 SLKTI---------QFGQPVALFKY--HNSPITSVDWHPHETTTFMASGEDDQTTIWDI 397
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 255 (94.8 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 64/225 (28%), Positives = 104/225 (46%)
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
H KE Y + W+ + ++GS D I +W+ D+ ++ + H + W
Sbjct: 103 HTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPR---MDR---SLKTFREHRYCIYSAIWS 156
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVA 284
+N +LF S D L IWD R N++ +KAH+ E+ +N YN+ + T S D T+
Sbjct: 157 PRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIR 216
Query: 285 LFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA 344
++D+R P IL HT V +++ P+ E++LAS + D ++VWD R
Sbjct: 217 IWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAR---------- 266
Query: 345 EDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
E P H H + WN ++S + D V VW +
Sbjct: 267 EQDPIIARMDH--HTEFVVGLDWNMFIDGQMASCSWDEQVCVWNL 309
Score = 191 (72.3 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 55/237 (23%), Positives = 109/237 (45%)
Query: 154 DDCDPDL-RLKGHD-KEG-YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
D D D+ K D ++G Y +WS E ++ S S D I +WD A + + I +
Sbjct: 43 DVLDRDIGAFKTFDTRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKS--- 99
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
+E H V V W+L ++ F + D + IW+ R +++ + + H + ++P N
Sbjct: 100 FEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRN 159
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+ A+ S D T+ ++D R L+ + +H E+ +W+ ++ + + + D+ + +W
Sbjct: 160 AHLFASVSGDRTLKIWDSRDNR-SLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIW 218
Query: 331 DLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
D+ D P +L GH + + + +++S + D +V VW
Sbjct: 219 DIRY----------PDRPTTIL---RGHTYAVRRIKCSPHSESMLASCSYDMSVIVW 262
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/169 (25%), Positives = 83/169 (49%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y WSP S S D + +WD ++D +++ +AH+ + W+ N+
Sbjct: 151 YSAIWSPRNAHLFASVSGDRTLKIWD----SRDN--RSLNTIKAHDHEILTCDWNKYNDK 204
Query: 230 LFGSAGDDCQLMIWDLR-TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
+ D + IWD+R ++ ++ H V + +P++E +LA+ S D +V ++D
Sbjct: 205 EVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDR 264
Query: 289 RKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
+ P+ + HTE V ++W+ + +AS + D ++ VW+L R G
Sbjct: 265 AREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGRPG 313
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 59/228 (25%), Positives = 99/228 (43%)
Query: 169 GYGLSWSPFKEGYL--VSGSHDNKICLWDVSAL-AQDKVIDAMHVYEAHESVVEDVSWHL 225
GY + +SPF+E L V+ H I L D+ I A ++ + + D +W
Sbjct: 10 GYSVEFSPFEEQRLACVTSQHFGIIGNGRQYILDVLDRDIGAFKTFDTRDGLY-DCTWSE 68
Query: 226 KNENLFGSAGDDCQLMIWDLRTNQTQQRVKA---HEKEVNYLSFNPYNEWVLATASSDTT 282
+NE S+ D + IWD + + +K+ H KEV + +N + T S D +
Sbjct: 69 ENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQS 128
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
+ +++ R M L H ++ W P + + AS + DR L +WD +R +
Sbjct: 129 IKIWNPR-MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWD-SRDNRSLNTI 186
Query: 343 DAEDGPPELLFSHGGHKAKISDFSWNK-NDPWVISSVADDNTVQVWQM 389
A D H+ D WNK ND V++ D T+++W +
Sbjct: 187 KAHD-----------HEILTCD--WNKYNDKEVVTGSVD-KTIRIWDI 220
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 261 (96.9 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 85/317 (26%), Positives = 136/317 (42%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
D E ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 124 DEEEEDDEEDEEERKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGVWSEKGQVEVFALR 181
Query: 147 KQAEKQQDDC-------DPDLRLK------GHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ + D D R+K GH EG+ L WSP G L++G I L
Sbjct: 182 RLLQVVDDPQALATFLRDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHL 241
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ- 252
W + V D + H VED+ W + +F S D + IWD+R ++
Sbjct: 242 WTPTDGGSWHV-D-QRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKAC 299
Query: 253 ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
AH+ +VN ++++ + E L + D + ++D+R K P+ H V
Sbjct: 300 MLTTATAHDGDVNVINWS-HREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTS 358
Query: 308 VEWDPNHETVLASSADDRRLMVWDLN-----RIGDEQLELDAEDGPPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL GD + + D P +LLF H G + +
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDAETDPGLADLPQQLLFVHQG-ETDL 417
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P V+ S A
Sbjct: 418 KELHWHPQCPGVLVSTA 434
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 237 DCQ--LMIW---DLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR- 289
DCQ + +W D + QR H + V L ++P + V A+ S+D ++ ++D+R
Sbjct: 234 DCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRA 293
Query: 290 --KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
L ++H +V + W + E L S DD L VWDL + + G
Sbjct: 294 APSKACMLTTATAHDGDVNVINWS-HREPFLLSGGDDGALKVWDLRQF---------KSG 343
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
P F H A ++ W+ D V ++ DN + W +
Sbjct: 344 SPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADNQITQWDL 383
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 236 DDCQLMIWDLRTNQTQQR----VKAHEKEVNYLSFNPYNEWVLATASSDTTVALF---DM 288
DD Q + LR QT+ + H E L ++P L T + L+ D
Sbjct: 188 DDPQALATFLRDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDG 247
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
V HT V ++W P +TV AS + D + +WD+ A
Sbjct: 248 GSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPSK 297
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+L + H ++ +W+ +P+++S DD ++VW +
Sbjct: 298 ACMLTTATAHDGDVNVINWSHREPFLLSG-GDDGALKVWDL 337
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 260 (96.6 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 87/317 (27%), Positives = 138/317 (43%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
D E + ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 123 DDEDDEDEEDEEERKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGVWSEKGQVEVFALR 180
Query: 147 KQAEKQQDDC-------DPDLRLK------GHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ + D D R+K GH EG+ L WSP G L++G I L
Sbjct: 181 RLLQVVDDPQALAIFLRDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHL 240
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ- 252
W + V D + H VED+ W + +F S D + IWD+R +
Sbjct: 241 WTPTDGGSWNV-D-QRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKAC 298
Query: 253 ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
AH+ +VN +S++ ++L+ D T+ ++D+R K P+ H V
Sbjct: 299 MLTTAAAHDGDVNVISWSRREPFLLS-GGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTS 357
Query: 308 VEWDPNHETVLASSADDRRLMVWDLNRIGD-EQLELDAEDG----PPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL D E E + + G P +LLF H G + +
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQG-ETDL 416
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P V+ S A
Sbjct: 417 KELHWHPQCPGVLISTA 433
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/162 (25%), Positives = 68/162 (41%)
Query: 237 DCQ--LMIWDLRT----NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
DCQ + +W N Q+ H + V L ++P + V A+ S+D ++ ++D+R
Sbjct: 233 DCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRA 292
Query: 291 M---TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
L ++H +V + W E L S DD L VWDL + + G
Sbjct: 293 APGKACMLTTAAAHDGDVNVISWS-RREPFLLSGGDDGTLKVWDLRQF---------KSG 342
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
P F H A ++ W+ D V ++ DN + W +
Sbjct: 343 SPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADNQITQWDL 382
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 236 DDCQLMIWDLRTNQTQQR----VKAHEKEVNYLSFNPYNEWVLATASSDTTVALF---DM 288
DD Q + LR Q + + H E L ++P L T + L+ D
Sbjct: 187 DDPQALAIFLRDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDG 246
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
V HT V ++W P +TV AS + D + +WD+ A G
Sbjct: 247 GSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPGK 296
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+L + H ++ SW++ +P+++S DD T++VW +
Sbjct: 297 ACMLTTAAAHDGDVNVISWSRREPFLLSG-GDDGTLKVWDL 336
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 243 (90.6 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 51/175 (29%), Positives = 96/175 (54%)
Query: 157 DPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHES 216
+P + H +E + ++P + ++ S D+ + LW A D+ ++ ++ H
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW-----AMDRPA-SVRTFKEHAY 150
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLAT 276
V W+ K+ ++F SA DC L IWD+R + + AH+ E+ +N Y++ +LAT
Sbjct: 151 CVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILAT 210
Query: 277 ASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
+S D TV ++D+R VPL +L+ H V +V++ P+ +++AS + D + +WD
Sbjct: 211 SSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 61/230 (26%), Positives = 104/230 (45%)
Query: 169 GYGLSWSPFKEGYLVSGSHDNKICLWD----VSALAQDK--VIDAMHVYEAHESVVEDVS 222
GY + +SPF E L + N L + V LA V +++ Y+ ++V DV
Sbjct: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAPGVTESVS-YDTADAVY-DVC 67
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKA---HEKEVNYLSFNPYNEWVLATASS 279
W ++++ +A D + I+D +++ H +EV + +NP T+S
Sbjct: 68 WSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSW 127
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQ 339
D TV L+ M + + H V+Q W+P H V AS++ D L +WD+ G
Sbjct: 128 DDTVKLWAMDR-PASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM 186
Query: 340 LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+ + A D F +I WNK D ++++ + D TV+VW +
Sbjct: 187 I-IPAHD------F-------EILSCDWNKYDDCILATSSVDKTVKVWDV 222
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 37/162 (22%), Positives = 69/162 (42%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y W+P S S D + +WDV +I A H+ + W+ ++
Sbjct: 153 YQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPA------HDFEILSCDWNKYDDC 206
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
+ ++ D + +WD+R+ + V H V + F+P+ ++A+ S D +V L+D
Sbjct: 207 ILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDY 266
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+ HTE ++ E ++AS+ D + VW
Sbjct: 267 MVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 258 (95.9 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 83/317 (26%), Positives = 136/317 (42%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
D E ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 118 DDEEEEDEEDEEDRKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGIWSEKGQVEVFALR 175
Query: 147 KQAEKQQDDC-------DPDLRLK------GHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ + D D R+K GH EG+ L WSP G L++G I L
Sbjct: 176 RLLQVVDDPQALATFLRDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHL 235
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ- 252
W + V D + H VED+ W + +F S D + IWD+R ++
Sbjct: 236 WTPTDGGSWHV-D-QRPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKAC 293
Query: 253 ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
AH+ +VN ++++ ++L+ D + ++D+R K P+ H +
Sbjct: 294 MLTTTSAHDGDVNVINWSRREPFLLS-GGDDGALKIWDLRQFKSGSPVATFKQHVAPITS 352
Query: 308 VEWDPNHETVLASSADDRRLMVWDLN-----RIGDEQLELDAEDGPPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL GD + + D P +LLF H G + +
Sbjct: 353 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLADLPQQLLFVHQG-ETDL 411
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P V+ S A
Sbjct: 412 KELHWHPQCPGVLVSTA 428
Score = 142 (55.0 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 43/162 (26%), Positives = 69/162 (42%)
Query: 237 DCQ--LMIW---DLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR- 289
DCQ + +W D + QR H + V L ++P + V A+ S+D ++ ++D+R
Sbjct: 228 DCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRA 287
Query: 290 --KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
L S+H +V + W E L S DD L +WDL + + G
Sbjct: 288 APSKACMLTTTSAHDGDVNVINWS-RREPFLLSGGDDGALKIWDLRQF---------KSG 337
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
P F H A I+ W+ D V ++ DN + W +
Sbjct: 338 SPVATFKQ--HVAPITSVEWHPQDSGVFAASGADNQITQWDL 377
Score = 115 (45.5 bits), Expect = 0.00098, P = 0.00098
Identities = 36/161 (22%), Positives = 65/161 (40%)
Query: 236 DDCQLMIWDLRTNQTQQR----VKAHEKEVNYLSFNPYNEWVLATASSDTTVALF---DM 288
DD Q + LR Q + + H E L ++P L T + L+ D
Sbjct: 182 DDPQALATFLRDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDG 241
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
V HT V ++W P +TV AS + D + +WD+ A
Sbjct: 242 GSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPSK 291
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+L + H ++ +W++ +P+++S DD +++W +
Sbjct: 292 ACMLTTTSAHDGDVNVINWSRREPFLLSG-GDDGALKIWDL 331
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 256 (95.2 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 85/317 (26%), Positives = 137/317 (43%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
D E + ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 124 DDEEDEDEEDEEEQKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGVWSEKGQVEVFALR 181
Query: 147 KQAEKQQDDC-------DPDLRLK------GHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ + D D R+K GH EG+ L WSP G L++G + L
Sbjct: 182 RLLQVVDDPQALAIFLRDEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHL 241
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ- 252
W + V D + H VED+ W + +F S D + IWD+R +
Sbjct: 242 WTPTEGGSWNV-D-QRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKAC 299
Query: 253 ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
AH+ +VN +S++ ++L+ D + ++D+R K P+ H V
Sbjct: 300 MLTTATAHDGDVNVISWSRREPFLLS-GGDDGALKVWDLRQFKSGSPVATFKQHMAPVTS 358
Query: 308 VEWDPNHETVLASSADDRRLMVWDLNRIGD-EQLELDAEDG----PPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL D E E + + G P +LLF H G + +
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQG-ETDL 417
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P V+ S A
Sbjct: 418 KELHWHPQCPGVLISTA 434
Score = 138 (53.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 37/145 (25%), Positives = 62/145 (42%)
Query: 248 NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM---TVPLHILSSHTEE 304
N Q+ H + V L ++P + V A+ S+D ++ ++D+R L ++H +
Sbjct: 251 NVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGD 310
Query: 305 VFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISD 364
V + W E L S DD L VWDL + + G P F H A ++
Sbjct: 311 VNVISWS-RREPFLLSGGDDGALKVWDLRQF---------KSGSPVATFKQ--HMAPVTS 358
Query: 365 FSWNKNDPWVISSVADDNTVQVWQM 389
W+ D V ++ DN + W +
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWDL 383
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 129 NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRL 162
NL GT+ S E D + E+ +++ P L L
Sbjct: 110 NLHGTRPSPSEGSDDDEEDEDEEDEEEQKPQLEL 143
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 254 (94.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 83/317 (26%), Positives = 135/317 (42%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
+ E ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 124 EEEEEEDEEDEEERKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGVWSEKGQVEVFALR 181
Query: 147 K--------QA-----EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ QA +Q P GH EG+ L WSP G L++G I L
Sbjct: 182 RLLQVVEEPQALAAFLRDEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHL 241
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ- 252
W + V D + H VED+ W +F S D + IWD+R ++
Sbjct: 242 WTPTDGGSWHV-D-QRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKAC 299
Query: 253 ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
AH+ +VN +S++ ++L+ D + ++D+R K P+ H V
Sbjct: 300 MLTTATAHDGDVNVISWSRREPFLLS-GGDDGALKIWDLRQFKSGSPVATFKQHVAPVTS 358
Query: 308 VEWDPNHETVLASSADDRRLMVWDLN-----RIGDEQLELDAEDGPPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL GD + + D P +LLF H G + ++
Sbjct: 359 VEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQG-ETEL 417
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P ++ S A
Sbjct: 418 KELHWHPQCPGLLVSTA 434
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/162 (24%), Positives = 68/162 (41%)
Query: 237 DCQ--LMIW---DLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR- 289
DCQ + +W D + QR H + V L ++P V A+ S+D ++ ++D+R
Sbjct: 234 DCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRA 293
Query: 290 --KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
L ++H +V + W E L S DD L +WDL + + G
Sbjct: 294 APSKACMLTTATAHDGDVNVISWS-RREPFLLSGGDDGALKIWDLRQF---------KSG 343
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
P F H A ++ W+ D V ++ D+ + W +
Sbjct: 344 SPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADHQITQWDL 383
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 252 (93.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 84/317 (26%), Positives = 137/317 (43%)
Query: 89 DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARC--MPQKPNLVGTKTSSCEVYVFDCA 146
D E ++E P++E+A G +NR R + ++P + G + +V VF
Sbjct: 123 DEEEEEDEEDEEERKPQLELAMVPHYGG-INRVRVSWLGEEP-VAGVWSEKGQVEVFALR 180
Query: 147 KQAEKQQDDC-------DPDLRLK------GHDKEGYGLSWSPFKEGYLVSGSHDNKICL 193
+ + D D R+K GH EG+ L WSP G L++G I L
Sbjct: 181 RLLQVVDDPQALATFLRDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHL 240
Query: 194 WDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR 253
W + V D + H VED+ W + +F S D + IWD+R ++
Sbjct: 241 WTPTDSGSWHV-D-QRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKAC 298
Query: 254 V----KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR--KMTVPLHILSSHTEEVFQ 307
+ AH +VN +S++ ++L+ D + ++D+R K P+ H V
Sbjct: 299 MLTTPAAHNGDVNVISWSRQEPFLLS-GGDDGALKVWDLRQFKSGSPVATFKQHVAPVTS 357
Query: 308 VEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-ELDAEDG----PPELLFSHGGHKAKI 362
VEW P V A+S D ++ WDL D + + + + G P +LLF H G + +
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLVGLPQQLLFVHQG-ETDL 416
Query: 363 SDFSWNKNDPWVISSVA 379
+ W+ P V+ S A
Sbjct: 417 KELHWHPQCPGVLVSTA 433
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 237 DCQ--LMIW---DLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
DCQ + +W D + QR H + V L ++P + V A+ S+D ++ ++D+R
Sbjct: 233 DCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRA 292
Query: 291 MTVPLHILSS---HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
+L++ H +V + W E L S DD L VWDL + + G
Sbjct: 293 APSKACMLTTPAAHNGDVNVISWS-RQEPFLLSGGDDGALKVWDLRQF---------KSG 342
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
P F H A ++ W+ D V ++ DN + W +
Sbjct: 343 SPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADNQITQWDL 382
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 236 DDCQLMIWDLRTNQTQQR----VKAHEKEVNYLSFNPYNEWVLATASSDTTVALF---DM 288
DD Q + LR Q + + H E L ++P L T + L+ D
Sbjct: 187 DDPQALATFLRDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDS 246
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
V HT V ++W P +TV AS + D + +WD+ A
Sbjct: 247 GSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPSK 296
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+L + H ++ SW++ +P+++S DD ++VW +
Sbjct: 297 ACMLTTPAAHNGDVNVISWSRQEPFLLSG-GDDGALKVWDL 336
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 251 (93.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 80/310 (25%), Positives = 131/310 (42%)
Query: 89 DSESNVGGKN--ENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCA 146
DS+ + GG+ E+ IP A +IR P + + T + +V + D
Sbjct: 169 DSDDDEGGEAILEHKSIPLGSTANRIRAHQTPQSDITKPPQ-TITATMLENSQVVIHDVT 227
Query: 147 KQAEK--------QQDDCDPDLRLKGHDKEGYGLSWSPFKE-GYLVSGSHDNKICLWDVS 197
P L+ H EGY L WSP G L++G +D I +
Sbjct: 228 PHLTSFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYV-TTR 286
Query: 198 ALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ--RVK 255
V D + H S VE++ W +N+F SA D + +WD+R+ VK
Sbjct: 287 TEGGGWVTDT-RAFRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVK 345
Query: 256 AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK----------MTV-PLHILSSHTEE 304
+VN ++++ +LAT + D A++D+R +T P+ + H E
Sbjct: 346 ISNTDVNVMTWSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEP 405
Query: 305 VFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA--EDGPPELLFSHGGHKAKI 362
+ +EW P ++V+A + D + +WDL DE+ +A D PP+LLF H + +
Sbjct: 406 ITSIEWHPTDDSVIAVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVH--YMESV 463
Query: 363 SDFSWNKNDP 372
+ W P
Sbjct: 464 KEVHWQAQMP 473
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 255 KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR-KMTVP-LHILSSHTEEVFQVEWDP 312
+ H V L ++P + V A+ASSD TV ++D+R K P +++ S+T+ V + W
Sbjct: 300 RGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTD-VNVMTWSK 358
Query: 313 NHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDP 372
+LA+ ADD + VWDL P F+ HK I+ W+ D
Sbjct: 359 QTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNF--HKEPITSIEWHPTDD 416
Query: 373 WVISSVADDNTVQVWQM 389
VI+ + DNTV +W +
Sbjct: 417 SVIAVGSADNTVTLWDL 433
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 246 (91.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 83/342 (24%), Positives = 152/342 (44%)
Query: 79 MIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPN----LVGTK 134
++ D ++ E + + +P++ ++ I + NR R P L +
Sbjct: 184 LVKDENEEDEEDEDDDDDVDSDPILD----SESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 135 TSSCEVYVFDCAKQAEK--------QQDDCDPDLRLKGHDK-EGYGLSWSPF-KEGYLVS 184
+ + EVY+FD + Q + + P ++ H EGYGL WSP G L+S
Sbjct: 240 SENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLS 299
Query: 185 GSHDNKICLWD--VSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI 242
G +I L + S+ DK + A +S +ED+ W +F + G D + I
Sbjct: 300 GDMSGRIYLTNRTTSSWTTDKT-----PFFASQSSIEDIQWSTGETTVFATGGCDGYIRI 354
Query: 243 WDLRTNQTQQRVK--AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT-------V 293
WD R+ + + + A + +VN +S++ +LA+ D + ++D+R T
Sbjct: 355 WDTRSKKHKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPS 414
Query: 294 PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN-RIGDEQLEL---DAE---D 346
P+ H + + ++P E+++A S++D + +WDL DE++ +A+ D
Sbjct: 415 PVANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHD 474
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
PP+LLF H K D W+ P + S D + +W+
Sbjct: 475 IPPQLLFVHWQRDVK--DVRWHPQIPGCLVSTGGDG-LNIWK 513
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 208 MHVYEAHESVVE-DVSWH-LKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVK--AHEKEVN 262
+H AH +V + W L N S ++ + + T+ T + A + +
Sbjct: 272 IHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTTSSWTTDKTPFFASQSSIE 331
Query: 263 YLSFNPYNEWVLATASSDTTVALFDMR-KMTVP-LHILSSHTEEVFQVEWDPNHETVLAS 320
+ ++ V AT D + ++D R K P L +++S ++ V + W +LAS
Sbjct: 332 DIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSD-VNVISWSSKINHLLAS 390
Query: 321 SADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVAD 380
DD VWDL + P + ++ HK+ I+ S+N D +I+ ++
Sbjct: 391 GHDDGSWGVWDLRNFTNNTTS------NPSPVANYDFHKSPITSISFNPLDESIIAVSSE 444
Query: 381 DNTVQVWQM 389
DNTV +W +
Sbjct: 445 DNTVTLWDL 453
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 30/134 (22%), Positives = 56/134 (41%)
Query: 25 PFLYDLIVSHPLEWPSLTVHWVP-SPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADA 83
P +Y+++ + L WP LTV + S + P ++D M A +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 84 VLPT--KD-SESNVGGKNENPVIPKVEI--AQKIRVDGEVNRARCMPQKPN----LVGTK 134
+ T KD +E + ++++ + I ++ I + NR R P L +
Sbjct: 180 LAKTLVKDENEEDEEDEDDDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 135 TSSCEVYVFDCAKQ 148
+ + EVY+FD + Q
Sbjct: 240 SENGEVYIFDLSAQ 253
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 246 (91.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 83/342 (24%), Positives = 152/342 (44%)
Query: 79 MIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPN----LVGTK 134
++ D ++ E + + +P++ ++ I + NR R P L +
Sbjct: 184 LVKDENEEDEEDEDDDDDVDSDPILD----SESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 135 TSSCEVYVFDCAKQAEK--------QQDDCDPDLRLKGHDK-EGYGLSWSPF-KEGYLVS 184
+ + EVY+FD + Q + + P ++ H EGYGL WSP G L+S
Sbjct: 240 SENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVNTGALLS 299
Query: 185 GSHDNKICLWD--VSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI 242
G +I L + S+ DK + A +S +ED+ W +F + G D + I
Sbjct: 300 GDMSGRIYLTNRTTSSWTTDKT-----PFFASQSSIEDIQWSTGETTVFATGGCDGYIRI 354
Query: 243 WDLRTNQTQQRVK--AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT-------V 293
WD R+ + + + A + +VN +S++ +LA+ D + ++D+R T
Sbjct: 355 WDTRSKKHKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPS 414
Query: 294 PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN-RIGDEQLEL---DAE---D 346
P+ H + + ++P E+++A S++D + +WDL DE++ +A+ D
Sbjct: 415 PVANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHD 474
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
PP+LLF H K D W+ P + S D + +W+
Sbjct: 475 IPPQLLFVHWQRDVK--DVRWHPQIPGCLVSTGGDG-LNIWK 513
Score = 120 (47.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 208 MHVYEAHESVVE-DVSWH-LKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVK--AHEKEVN 262
+H AH +V + W L N S ++ + + T+ T + A + +
Sbjct: 272 IHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYLTNRTTSSWTTDKTPFFASQSSIE 331
Query: 263 YLSFNPYNEWVLATASSDTTVALFDMR-KMTVP-LHILSSHTEEVFQVEWDPNHETVLAS 320
+ ++ V AT D + ++D R K P L +++S ++ V + W +LAS
Sbjct: 332 DIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSD-VNVISWSSKINHLLAS 390
Query: 321 SADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVAD 380
DD VWDL + P + ++ HK+ I+ S+N D +I+ ++
Sbjct: 391 GHDDGSWGVWDLRNFTNNTTS------NPSPVANYDFHKSPITSISFNPLDESIIAVSSE 444
Query: 381 DNTVQVWQM 389
DNTV +W +
Sbjct: 445 DNTVTLWDL 453
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 30/134 (22%), Positives = 56/134 (41%)
Query: 25 PFLYDLIVSHPLEWPSLTVHWVP-SPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADA 83
P +Y+++ + L WP LTV + S + P ++D M A +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 84 VLPT--KD-SESNVGGKNENPVIPKVEI--AQKIRVDGEVNRARCMPQKPN----LVGTK 134
+ T KD +E + ++++ + I ++ I + NR R P L +
Sbjct: 180 LAKTLVKDENEEDEEDEDDDDDVDSDPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASM 239
Query: 135 TSSCEVYVFDCAKQ 148
+ + EVY+FD + Q
Sbjct: 240 SENGEVYIFDLSAQ 253
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 231 (86.4 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 54/173 (31%), Positives = 88/173 (50%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D LWD + V ++ ++ HE V+
Sbjct: 106 KEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPA------VGKSLRTFKGHEGVIYST 159
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++ + + AH+ E+ + Y+E +L T + D
Sbjct: 160 IWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDC 219
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
++ +D+R + P+ IL HT V +V++ P H T+LAS + D + WD ++
Sbjct: 220 SLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSK 272
Score = 188 (71.2 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 121 ARCMPQKPNLVGTKTSSCEVY-VFDCAKQAEKQQDDCDPDLRLKGHD-KEG-YGLSWSPF 177
A P P V ++ + Y + C A +Q++ L L+ D +G + ++WS
Sbjct: 20 AEFSPYWPGRVAC--AAAQYYGIAGCGTLAVLEQNETGIVL-LRSFDWNDGLFDVTWSEN 76
Query: 178 KEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW-HLKNENLFGSAGD 236
E L++ S D + +WD+ A+ K + VY+ H V W + E L S
Sbjct: 77 NEHVLITSSGDGSLQIWDI---AKPK--GPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSW 131
Query: 237 DCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLH 296
D +WD ++ + K HE + ++P+ A+AS D T+ ++D++ V L
Sbjct: 132 DQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRL- 190
Query: 297 ILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
++ +H E+ +W E +L + A D L WDL +
Sbjct: 191 VIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNV 229
Score = 178 (67.7 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 47/142 (33%), Positives = 64/142 (45%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
KGH+ Y WSP G S S D + +WDV A VI A H++ +
Sbjct: 150 KGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIPA------HQAEILSCD 203
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W +ENL + DC L WDLR Q + H V + F+P++ +LA+ S D
Sbjct: 204 WCKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDF 263
Query: 282 TVALFDMRKMTVPLHILSSHTE 303
TV +D K L + HTE
Sbjct: 264 TVRFWDFSKPNPLLETVEHHTE 285
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/235 (22%), Positives = 105/235 (44%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLV--SGSHDNKICLWDVSALAQDKV-IDAMHVYEAHES 216
LRL G GY +SP+ G + + + ++ L Q++ I + ++ ++
Sbjct: 10 LRLPG--LHGYAAEFSPYWPGRVACAAAQYYGIAGCGTLAVLEQNETGIVLLRSFDWNDG 67
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYN-EWVL 274
+ DV+W NE++ ++ D L IWD+ + +V K H +E + ++ E ++
Sbjct: 68 LF-DVTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLV 126
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
+ S D T L+D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 127 VSGSWDQTAKLWDPA-VGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKA 185
Query: 335 IGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
G +L + A H+A+I W K D ++ + A D +++ W +
Sbjct: 186 PG-VRLVIPA-------------HQAEILSCDWCKYDENLLVTGAVDCSLKGWDL 226
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 229 (85.7 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 56/180 (31%), Positives = 93/180 (51%)
Query: 163 KGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS ++ LV SGS D + +WD + V +++ + HESV+
Sbjct: 103 KEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYST 156
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++T + + AH+ E+ + YNE +L T + D
Sbjct: 157 IWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDC 216
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 217 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDPLLE 275
Score = 192 (72.6 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 56/222 (25%), Positives = 99/222 (44%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW-HLKNE 228
+ ++WS E LV+ S D + LWD + K + VY+ H V V W ++E
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRDE 120
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
L S D + +WD + + HE + ++P+ A+AS D T+ ++D+
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
+ V + ++ +H E+ +W +E +L + A D L WDL + EL
Sbjct: 181 KTTGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFEL------ 233
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
L ++ + K S F + V++S + D TV+ W +
Sbjct: 234 --LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNFS 268
Score = 183 (69.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 48/170 (28%), Positives = 74/170 (43%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV K V AH++ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVIPAHQAEILSCD 200
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 201 WCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 260
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE ++ T +A + D + +++
Sbjct: 261 TVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIYN 310
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY + +SP+ G L + + + L D+ + ++ + +
Sbjct: 7 LRVPG--RHGYAVEFSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDG 64
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPY-NEWVLA 275
+ DV+W NE++ + D L +WD + Q K H +EV + ++ +E ++
Sbjct: 65 LFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVV 124
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV ++D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWDPT-VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 183
Query: 336 G 336
G
Sbjct: 184 G 184
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 226 (84.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 55/180 (30%), Positives = 93/180 (51%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + +WD + V +++ + HESV+
Sbjct: 103 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYST 156
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++T + + AH+ E+ + YNE ++ T + D
Sbjct: 157 IWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDC 216
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 217 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDPLLE 275
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 49/170 (28%), Positives = 74/170 (43%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV K V AH++ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVIPAHQTEILSCD 200
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 201 WCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 260
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE ++ T +A + D + ++D
Sbjct: 261 TVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 310
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW-HLKNE 228
+ ++WS E LV+ S D + LWD + K + VY+ H V V W + E
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
L S D + +WD + + HE + ++P+ A+AS D T+ ++D+
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
+ V + ++ +H E+ +W +E ++ + A D L WDL + EL
Sbjct: 181 KTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFEL------ 233
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
L ++ + K S F + V++S + D TV+ W +
Sbjct: 234 --LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNFS 268
Score = 141 (54.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 42/181 (23%), Positives = 80/181 (44%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY +SP+ G L + + + L D+ + ++ + +
Sbjct: 7 LRVPG--RHGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDG 64
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYN-EWVLA 275
+ DV+W NE++ + D L +WD + Q K H +EV + ++ E ++
Sbjct: 65 LFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 124
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV ++D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWDPT-VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 183
Query: 336 G 336
G
Sbjct: 184 G 184
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 227 (85.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 57/180 (31%), Positives = 92/180 (51%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + LWD + V ++ + HESV+
Sbjct: 108 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYST 161
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD+++ + V AH+ E+ + YNE +L T + D
Sbjct: 162 IWSPHIPGCFASASGDQTLRIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDC 221
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 222 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDPLLE 280
Score = 195 (73.7 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 62/241 (25%), Positives = 108/241 (44%)
Query: 154 DDCDPDLRL-KGHD-KEG-YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
D + LRL + D +G + ++WS E LV+ S D + LWD + K + V
Sbjct: 52 DQNESGLRLFRSFDWNDGLFDVTWSENNEHILVTCSGDGSLQLWDTA-----KATGPLQV 106
Query: 211 YEAHESVVEDVSW-HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY 269
Y+ H V V W + E L S D + +WD ++ + HE + ++P+
Sbjct: 107 YKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPH 166
Query: 270 NEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMV 329
A+AS D T+ ++D++ V + ++ +H E+ +W +E +L + A D L
Sbjct: 167 IPGCFASASGDQTLRIWDVKSTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRG 225
Query: 330 WDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
WDL + EL L ++ + K S F + V++S + D TV+ W
Sbjct: 226 WDLRNVRQPVFEL--------LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNF 272
Query: 390 T 390
+
Sbjct: 273 S 273
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 49/170 (28%), Positives = 75/170 (44%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV + V+ A H++ +
Sbjct: 152 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIVVPA------HQAEILSCD 205
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 265
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE ++ T +A A D + ++D
Sbjct: 266 TVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
Score = 143 (55.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 43/181 (23%), Positives = 80/181 (44%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY +SP+ G L + + + L D+ + ++ + +
Sbjct: 12 LRVPG--RHGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLILDQNESGLRLFRSFDWNDG 69
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYN-EWVLA 275
+ DV+W NE++ + D L +WD + Q K H +EV + ++ E ++
Sbjct: 70 LFDVTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 129
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV L+D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWDPT-VGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKST 188
Query: 336 G 336
G
Sbjct: 189 G 189
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 238 (88.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 60/183 (32%), Positives = 91/183 (49%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE 215
C D +L GH + +SW P K +VSG DN I +WD + +Q+ I +H H+
Sbjct: 241 CTEDNQLVGHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDAKS-SQN--ITTLH---GHK 293
Query: 216 SVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLA 275
S V V W+ +N N SA D L ++D+RT + Q K H KEV L+ +PY+E +
Sbjct: 294 STVSKVEWN-QNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFV 352
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWDLNR 334
+ D + + + I S+H +V+ + W P H +LAS ++D W NR
Sbjct: 353 SGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGH--ILASGSNDHTTKFWSRNR 410
Query: 335 IGD 337
D
Sbjct: 411 PAD 413
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 52/200 (26%), Positives = 95/200 (47%)
Query: 196 VSALAQDKVI---DAMHVYEAHESV-----VEDVSWHLKNENLFGSAGDDCQLMIWDLRT 247
+++ A DK+I D E ++ V V+ VSWH ++L S G D + IWD ++
Sbjct: 224 LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWH-PQKSLIVSGGKDNNIKIWDAKS 282
Query: 248 NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQ 307
+Q + H+ V+ + +N W+++ ASSD + +FD+R M + H +EV
Sbjct: 283 SQNITTLHGHKSTVSKVEWNQNGNWIVS-ASSDQLLKVFDIRTMK-EMQTFKGHGKEVTA 340
Query: 308 VEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSW 367
+ P HE + S D +++ W + + Q E+ H H A + SW
Sbjct: 341 LALHPYHEDLFVSGDKDGKILYWIVGN-PEPQAEI------------HSAHDADVWSLSW 387
Query: 368 NKNDPWVISSVADDNTVQVW 387
+ +++S ++D+T + W
Sbjct: 388 HPIGH-ILASGSNDHTTKFW 406
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 172 LSWSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
+SW+P EG LV+GS + LW+ + ++ +AH+S V + W NE+
Sbjct: 131 VSWTP--EGRRLVTGSSSGEFTLWNGLTFNFETIL------QAHDSAVRSIIWS-HNEDW 181
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEK-EVNYLSFNPYNEWVLATASSDTTVALFDMR 289
S D + W N + KAHE+ ++ LSF+P + LA+ + D + ++D
Sbjct: 182 MVSGDDSGNIKYWQPNMNNVKI-FKAHEQSKIRGLSFSP-TDLKLASCADDKIIKIWDFA 239
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
+ T ++ H +V V W P ++++ S D + +WD
Sbjct: 240 RCTEDNQLVG-HGWDVKCVSWHPQ-KSLIVSGGKDNNIKIWD 279
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 59/239 (24%), Positives = 107/239 (44%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE-SVVED 220
L+ HD + WS E ++VSG I W + ++ + +++AHE S +
Sbjct: 163 LQAHDSAVRSIIWS-HNEDWMVSGDDSGNIKYWQPN-------MNNVKIFKAHEQSKIRG 214
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
+S+ + L S DD + IWD R + Q V H +V +S++P ++ +
Sbjct: 215 LSFSPTDLKL-ASCADDKIIKIWDFARCTEDNQLV-GHGWDVKCVSWHPQKS-LIVSGGK 271
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQ 339
D + ++D K + + L H V +VEW+ N ++++S+D + L V+D+ + + Q
Sbjct: 272 DNNIKIWDA-KSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSD-QLLKVFDIRTMKEMQ 329
Query: 340 L------ELDAEDGPP--ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
E+ A P E LF G KI W +P + + + VW ++
Sbjct: 330 TFKGHGKEVTALALHPYHEDLFVSGDKDGKI--LYWIVGNPEPQAEIHSAHDADVWSLS 386
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 225 (84.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 56/180 (31%), Positives = 92/180 (51%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + LWD + V ++ + HESV+
Sbjct: 108 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT------VGKSLCTFRGHESVIYST 161
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F S+ D L IWD++T + V AH+ E+ + YNE ++ T + D
Sbjct: 162 IWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDC 221
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 222 SLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDPLLE 280
Score = 191 (72.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/170 (29%), Positives = 74/170 (43%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV K V AH++ +
Sbjct: 152 RGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV------KTTGVRIVVPAHQAEILSCD 205
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 206 WCKYNENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 265
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE ++ T +A A D + ++D
Sbjct: 266 TVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
Score = 181 (68.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 58/241 (24%), Positives = 108/241 (44%)
Query: 154 DDCDPDLRL-KGHD-KEG-YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
D + LRL + D +G + ++WS E LV+ S D + LWD + + + V
Sbjct: 52 DQNESGLRLFRSFDWNDGLFDVTWSENNEHVLVTCSGDGSLQLWDTA-----RATGPLQV 106
Query: 211 YEAHESVVEDVSW-HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY 269
++ H V V W + E L S D + +WD ++ + HE + ++P+
Sbjct: 107 FKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPH 166
Query: 270 NEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMV 329
A++S D T+ ++D++ V + ++ +H E+ +W +E ++ + A D L
Sbjct: 167 IPGCFASSSGDQTLRIWDVKTTGVRI-VVPAHQAEILSCDWCKYNENLVVTGAVDCSLRG 225
Query: 330 WDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
WDL + EL L ++ + K S F + V++S + D TV+ W
Sbjct: 226 WDLRNVQQPVFEL--------LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNF 272
Query: 390 T 390
+
Sbjct: 273 S 273
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY +SP+ G L + + + L D+ + ++ + +
Sbjct: 12 LRVPG--RHGYAAEFSPYLPGRLACAASQHYGIAGSGTLLILDQNESGLRLFRSFDWNDG 69
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYN-EWVLA 275
+ DV+W NE++ + D L +WD R Q K H +EV + ++ E ++
Sbjct: 70 LFDVTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVV 129
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV L+D + L H ++ W P+ ASS+ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWDPT-VGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTT 188
Query: 336 G 336
G
Sbjct: 189 G 189
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 224 (83.9 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 55/180 (30%), Positives = 93/180 (51%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + +WD + V +++ + HESV+
Sbjct: 103 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT------VGNSLCTFRGHESVIYST 156
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++T + + AH+ E+ + YNE ++ T + D
Sbjct: 157 IWSPHIPGCFASASGDQTLRIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDC 216
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 217 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDPLLE 275
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 49/170 (28%), Positives = 74/170 (43%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV K V AH++ +
Sbjct: 147 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV------KTAGVRIVIPAHQTEILSCD 200
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 201 WCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 260
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE ++ T +A + D + ++D
Sbjct: 261 TVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIYD 310
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW-HLKNE 228
+ ++WS E LV+ S D + LWD + K + VY+ H V V W + E
Sbjct: 66 FDVTWSEDNEHVLVTCSGDGSLQLWDTA-----KATGPLQVYKEHTQEVYSVDWSQTRGE 120
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
L S D + +WD + + HE + ++P+ A+AS D T+ ++D+
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
+ V + ++ +H E+ +W +E ++ + A D L WDL + EL
Sbjct: 181 KTAGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFEL------ 233
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
L ++ + K S F + V++S + D TV+ W +
Sbjct: 234 --LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNFS 268
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/181 (22%), Positives = 80/181 (44%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY +SP+ G L + + + + D+ + ++ + +
Sbjct: 7 LRVPG--RHGYAAEFSPYLPGRLACAAAQHYGIAGCGTLIILDQNQSGLQIFRSFDWSDG 64
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYN-EWVLA 275
+ DV+W NE++ + D L +WD + Q K H +EV + ++ E ++
Sbjct: 65 LFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 124
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV ++D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWDPT-VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTA 183
Query: 336 G 336
G
Sbjct: 184 G 184
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 223 (83.6 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 53/173 (30%), Positives = 90/173 (52%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + LWD + V ++ ++ HES++
Sbjct: 108 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT------VGRSLCTFKGHESIIYST 161
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++T + V AH+ E+ + YNE +L T + D
Sbjct: 162 IWSPHIPGCFASASGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDC 221
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
++ +D+R + P+ L HT + +V++ P + +VLAS + D + W+ ++
Sbjct: 222 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSK 274
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 57/222 (25%), Positives = 99/222 (44%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW-HLKNE 228
+ ++WS E LV+ S D + LWD + A + VY+ H V V W + E
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTAGAA-----GPLQVYKEHTQEVYSVDWSQTRGE 125
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
L S D + +WD ++ K HE + ++P+ A+AS D T+ ++D+
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
+ V + ++ +H E+ +W +E +L + A D L WDL + EL
Sbjct: 186 KTTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFEL------ 238
Query: 349 PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
L ++ + K S F + V++S + D TV+ W +
Sbjct: 239 --LGHTYAIRRVKFSPFYAS-----VLASCSYDFTVRFWNFS 273
Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 46/142 (32%), Positives = 62/142 (43%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
KGH+ Y WSP G S S D + +WDV K V AH++ +
Sbjct: 152 KGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV------KTTGVRIVVPAHQAEILSCD 205
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P+ VLA+ S D
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDF 265
Query: 282 TVALFDMRKMTVPLHILSSHTE 303
TV ++ K L + HTE
Sbjct: 266 TVRFWNFSKPNPLLETVEHHTE 287
Score = 140 (54.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 43/181 (23%), Positives = 79/181 (43%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE--SV 217
LR+ G + GY +SP+ G L + + + L D + ++ + +
Sbjct: 12 LRVPG--RHGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLILDHNESGLRIFRSFDWTDA 69
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYN-EWVLA 275
+ DV+W NE++ + D L +WD +V K H +EV + ++ E ++
Sbjct: 70 LFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVV 129
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D TV L+D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWDPT-VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 188
Query: 336 G 336
G
Sbjct: 189 G 189
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 222 (83.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/180 (30%), Positives = 91/180 (50%)
Query: 163 KGHDKEGYGLSWSPFK-EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
K H +E Y + WS + E +VSGS D + LWD + V ++ + HES++
Sbjct: 108 KEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT------VGKSLCTFRGHESIIYST 161
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W F SA D L IWD++ + + AH+ E+ + YNE +L T + D
Sbjct: 162 IWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDC 221
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
++ +D+R + P+ L HT + +V++ P H +VLAS + D + W+ ++ D LE
Sbjct: 222 SLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-PDSLLE 280
Score = 197 (74.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 65/246 (26%), Positives = 112/246 (45%)
Query: 157 DPD---LRL-KGHD-KEG-YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
DPD LRL + D +G + ++WS E L++ S D + LWD + K + V
Sbjct: 52 DPDEAGLRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTA-----KAAGPLQV 106
Query: 211 YEAHESVVEDVSW-HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY 269
Y+ H V V W + E L S D + +WD ++ + HE + ++P+
Sbjct: 107 YKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPH 166
Query: 270 NEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMV 329
A+AS D T+ ++D++ V + ++ +H E+ +W +E +L + A D L
Sbjct: 167 IPGCFASASGDQTLRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRG 225
Query: 330 WDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
WDL + EL L ++ + K S F + V++S + D TV+ W
Sbjct: 226 WDLRNVRQPVFEL--------LGHTYAIRRVKFSPFHAS-----VLASCSYDFTVRFWNF 272
Query: 390 T--DSI 393
+ DS+
Sbjct: 273 SKPDSL 278
Score = 193 (73.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 50/170 (29%), Positives = 76/170 (44%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH+ Y WSP G S S D + +WDV A VI A H++ +
Sbjct: 152 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPA------HQAEILSCD 205
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W NENL + DC L WDLR Q + H + + F+P++ VLA+ S D
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDF 265
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
TV ++ K L + HTE +++ T +A + D + ++D
Sbjct: 266 TVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLV--SGSHDNKICLWDVSALAQDKV-IDAMHVYEAHES 216
LR G + GY +SP+ G L + H + L D+ + ++ ++
Sbjct: 12 LRTPG--RHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDG 69
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQRVKAHEKEVNYLSFNPYN-EWVL 274
+ DV+W NE++ + D L +WD + Q K H +EV + ++ E ++
Sbjct: 70 LF-DVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLV 128
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
+ S D TV L+D + L H ++ W P+ AS++ D+ L +WD+
Sbjct: 129 VSGSWDQTVKLWDPT-VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKA 187
Query: 335 IG 336
G
Sbjct: 188 AG 189
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 212 (79.7 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 68/232 (29%), Positives = 116/232 (50%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH +G W P K L + D I +W A +Q V + + + H + DV
Sbjct: 10 LTGHRGRAWGAGWHP-KGNVLATCGEDKTIRIWAEDA-SQRWVAKTV-LSDGHSRTIRDV 66
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATASS 279
+W + L SA D + IWD ++ + + ++ HE EV +S++ +LAT S
Sbjct: 67 AWSPCGQYL-ASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGS-LLATCSR 124
Query: 280 DTTVALFDMRKMTVP--LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
D +V ++++ + +L++HT++V +VEW P HE +LAS++ D + ++
Sbjct: 125 DKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHP-HEDILASASYDNTIKLYK------ 177
Query: 338 EQLELDAEDGPPELLFSHGGHKAKIS-DFSWNKNDPWVISSVADDNTVQVWQ 388
E L D++ + L SH IS D S N+ ++S +DD TV++WQ
Sbjct: 178 EDLA-DSDWSSFDTLVSHESTVWSISFDGSGNR-----LASCSDDQTVKIWQ 223
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 72/303 (23%), Positives = 131/303 (43%)
Query: 108 IAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQA-EKQQDDCDPDLRLKGHD 166
+A+ + DG R + P G +S FD +K+ + + + L+GH+
Sbjct: 50 VAKTVLSDGHSRTIRDVAWSP--CGQYLASAS---FDATVAIWDKKSGEFECNATLEGHE 104
Query: 167 KEGYGLSWSPFKEGYLVSG-SHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHL 225
E +SWS K G L++ S D + +W+V AQ+ + V H V+ V WH
Sbjct: 105 NEVKSVSWS--KSGSLLATCSRDKSVWVWEV---AQEDEYECAAVLNTHTQDVKKVEWH- 158
Query: 226 KNENLFGSAGDDCQLMIW--DLRTNQTQQ--RVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+E++ SA D + ++ DL + + +HE V +SF+ LA+ S D
Sbjct: 159 PHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNR-LASCSDDQ 217
Query: 282 TVALFDMRK------MTVPLH---------ILSSHTEEVFQVEWDPNHETVLASSADDRR 326
TV ++ K ++ P + + H+ V+ + W +LA++ D
Sbjct: 218 TVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWC-KQSGLLATACGD-- 274
Query: 327 LMVWDLNRIGDEQLELDAEDGPP-ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
D+ RI E +E + P E++ S H ++ WN ++ + +DD V+
Sbjct: 275 ----DMVRIFKE-VEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVK 329
Query: 386 VWQ 388
+W+
Sbjct: 330 LWK 332
>POMBASE|SPBC577.09 [details] [associations]
symbol:ckn1 "ERCC-8 DNA repair homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0070912 "Ddb1-Ckn1
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC577.09 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006283
PIR:T40553 RefSeq:NP_595307.1 ProteinModelPortal:Q9USR0
STRING:Q9USR0 EnsemblFungi:SPBC577.09.1 GeneID:2540861
KEGG:spo:SPBC577.09 HOGENOM:HOG000248233 KO:K10570 OMA:KIWDTNE
OrthoDB:EOG4BS0W2 NextBio:20801977 GO:GO:0070912 Uniprot:Q9USR0
Length = 404
Score = 213 (80.0 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 60/246 (24%), Positives = 116/246 (47%)
Query: 157 DPDLRLKGHDKEGY-----GLSWSPFKEGYLVSGSHDNKICLWDVSALAQ----DKVIDA 207
+PD+++K G LS +VSG ++ I +WD+ + Q D ++D
Sbjct: 33 NPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDT 92
Query: 208 MHVYEA---HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYL 264
++ A H+ + D+ W + +F S+ D L +WD+ T Q + ++
Sbjct: 93 LNAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSH- 151
Query: 265 SFNPY-NEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSAD 323
+++P + ++ATA +++ L DM+ + H LS HT V V+W P +E VLAS +
Sbjct: 152 AWSPIASHCLIATAYRSSSIRLCDMQSGSYT-HSLSGHTGNVLAVDWCPKNEFVLASGSA 210
Query: 324 DRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNT 383
D +WD+ ++ +D + ++ H ++ +W +D ++S D+
Sbjct: 211 DGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWT-SDARYLASCGTDDR 269
Query: 384 VQVWQM 389
++VW M
Sbjct: 270 IRVWNM 275
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 210 (79.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWH 224
L P + Y++SG D I L+D+ ++ V + H+ VE V W+
Sbjct: 49 LDIEPVEARYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWY 108
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY--NEWVLATASSDTT 282
+ +F S+ D L +WD T QT V E+ V +P ++A +
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVATKHCLVAVGTRGPK 167
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
V L D++ + HIL H +E+ V W P E VLA+++ D R+ +WD+ R + L
Sbjct: 168 VQLCDLKSGSCS-HILQGHRQEILAVSWSPRCEYVLATASADSRVKLWDVRRASGCLITL 226
Query: 343 DAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
D +G ++ H K++ + ND + +V DN +++W
Sbjct: 227 DQHNGKKSQAVESANTAHNGKVNGLCFT-NDGLHLLTVGTDNRMRLW 272
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 214 (80.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 59/226 (26%), Positives = 104/226 (46%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+ H + G+S+SP + VSGS D + +WD +++V+ H + V+ V
Sbjct: 226 QAHKEAIRGISFSP-TDSKFVSGSDDGTLRIWDFMRCQEERVL------RGHGADVKCVH 278
Query: 223 WHLKNENLFGSAGDDCQ-LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
WH + + + D+ Q + IWD ++ + AH+ V L +N W L TAS D
Sbjct: 279 WHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNW-LVTASRDH 337
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+ LFD+R + + + H +E V W P HE + S D ++ W+ +G
Sbjct: 338 LLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT---- 390
Query: 342 LDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
D E G E H + + +W+ ++ S ++D+T++ W
Sbjct: 391 -DKEIGCVET-----AHDSIVWTLAWHPLGH-ILCSGSNDHTIKFW 429
Score = 198 (74.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/187 (29%), Positives = 98/187 (52%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDV-SALAQDKVIDAMHVYE 212
C + L+GH + + W P K G +VSGS DN+ I +WD S +A + +H
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQK-GMIVSGSKDNQQPIKIWDPKSGIA----LATLH--- 312
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNE 271
AH+S V D+ W+ N N +A D L ++D+R + + +V + H+KE + +S++P +E
Sbjct: 313 AHKSTVMDLKWN-DNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHE 371
Query: 272 WVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVW 330
+ + SD ++ +++ + ++H V+ + W P H +L S ++D + W
Sbjct: 372 GLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGH--ILCSGSNDHTIKFW 429
Query: 331 DLNRIGD 337
NR GD
Sbjct: 430 TRNRPGD 436
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/185 (23%), Positives = 86/185 (46%)
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY 269
+Y+AH+ + +S+ ++ F S DD L IWD Q ++ ++ H +V + ++P
Sbjct: 224 MYQAHKEAIRGISFS-PTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHP- 281
Query: 270 NEWVLATASSDTT--VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRL 327
+ ++ + S D + ++D K + L L +H V ++W+ N ++ +S D L
Sbjct: 282 QKGMIVSGSKDNQQPIKIWDP-KSGIALATLHAHKSTVMDLKWNDNGNWLVTASRD-HLL 339
Query: 328 MVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
++D+ + +E +F GHK + S SW+ + S D ++ W
Sbjct: 340 KLFDIRNLREEVQ-----------VFR--GHKKEASSVSWHPIHEGLFCSGGSDGSILFW 386
Query: 388 QM-TD 391
+ TD
Sbjct: 387 NVGTD 391
>UNIPROTKB|E1C100 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AADN02045784
EMBL:AADN02045777 EMBL:AADN02045778 EMBL:AADN02045779
EMBL:AADN02045780 EMBL:AADN02045781 EMBL:AADN02045782
EMBL:AADN02045783 IPI:IPI00574117 RefSeq:XP_424742.1
UniGene:Gga.11058 ProteinModelPortal:E1C100
Ensembl:ENSGALT00000023755 GeneID:427153 KEGG:gga:427153
NextBio:20828454 Uniprot:E1C100
Length = 399
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/229 (27%), Positives = 105/229 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQD-----KVIDAM---HVYEAHESVVEDVSW 223
L P + Y++SG D I L+D+ L++ K + ++ H +AH+ VE V W
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENLSRKPNYTCKALCSVGRSHP-DAHKFSVETVQW 107
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY--NEWVLATASSDT 281
+ + +F S+ D L IWD T Q V E V +P ++A +
Sbjct: 108 YPHDTGMFTSSSFDKTLKIWDTNTLQPAD-VFQFEGTVYSHHMSPVATKHCLIAVGTKSP 166
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
V L D++ + HIL H +EV V W P HE VLA+++ D ++ +WD+ R
Sbjct: 167 KVQLCDLKSGSCS-HILQGHRQEVLAVSWSPRHEYVLATASADSKVKLWDVRRASGCLTT 225
Query: 342 LDAEDGPPELLFSHG---GHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
LD +G S H +++ + +D + +V D+ +++W
Sbjct: 226 LDQHNGEKSKASSEAVNTAHNGRVNGLCYT-SDGLHLLTVGTDDRMRLW 273
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 57/231 (24%), Positives = 105/231 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWH 224
L P + Y++SG D I L+D+ ++ V + H VE V W+
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY 108
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN--EWVLATASSDTT 282
+ +F S+ D L +WD T QT V E+ V +P + ++A +
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPK 167
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
V L D++ + HIL H +E+ V W P ++ +LA+++ D R+ +WD+ R + L
Sbjct: 168 VQLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITL 226
Query: 343 DAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
D +G ++ H K++ + +D + +V DN +++W ++
Sbjct: 227 DQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSN 276
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 57/228 (25%), Positives = 108/228 (47%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQD-----KVIDAM---HVYEAHESVVEDVSW 223
L P + Y++SG D + L+D+ ++ K + ++ H + H+ VE V W
Sbjct: 49 LDIEPVEGRYMLSGGSDGVVVLYDLENASRQPHYTCKAVCSVGRSHP-DVHKYSVETVQW 107
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEV--NYLSFNPYNEWVLATASSDT 281
+ + +F S+ D L +WD T Q V E+ V +++S ++A +
Sbjct: 108 YPHDTGMFTSSSFDKTLKVWDTNTLQAAD-VFNFEETVYSHHMSPAATKHCLVAVGTRGP 166
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
V L D++ + HIL H +E+ V W P H+ +LA+++ D R+ +WD+ R L
Sbjct: 167 KVQLCDLKSGSCS-HILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLT 225
Query: 342 LDAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
LD +G ++ H K++ + +D + ++ DN +++W
Sbjct: 226 LDQHNGKKSQAAESANTAHNGKVNGLCFT-SDGLHLLTIGTDNRMRLW 272
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 206 (77.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 57/231 (24%), Positives = 104/231 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWH 224
L P + Y++SG D I L+D+ ++ V + H+ VE V W+
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRNHPDVHKYSVETVQWY 108
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY--NEWVLATASSDTT 282
+ +F S+ D L +WD T QT V E+ V +P ++A +
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVATKHCLVAVGTKGPK 167
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
V L D++ + HIL H +E+ V W P +E +LA+++ D + +WD+ R + L
Sbjct: 168 VQLCDLKSGSCS-HILQGHRQEILAVSWSPRYEYILATASADSKAKLWDVRRASGCLITL 226
Query: 343 DAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
D +G ++ H K++ + +D + +V DN +++W ++
Sbjct: 227 DQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSN 276
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 204 (76.9 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 57/227 (25%), Positives = 104/227 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWH 224
L P + Y++SG D I L+D+ ++ V + H+ VE V W+
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWY 108
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEV--NYLSFNPYNEWVLATASSDTT 282
+ +F S+ D L +WD T Q V E+ V +++S ++A +
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQAAD-VFNFEETVYSHHMSPAATKHCLVAVGTRGPK 167
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
V L D++ + HIL H +E+ V W P ++ +LA+++ D R+ +WD+ R L L
Sbjct: 168 VQLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLLTL 226
Query: 343 DAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
D +G ++ H K++ + +D + +V DN +++W
Sbjct: 227 DQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLW 272
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 204 (76.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 157 DPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHES 216
+P ++GH + W P +L + +D+ LWD+ A Q++++ H E H
Sbjct: 313 EPVADIEGHSMRVARVMWHPSGR-FLGTTCYDHSWRLWDLEA--QEEIL---H-QEGHSK 365
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLAT 276
V D+++H +L G+ G D +WDLRT + ++ H KE+ L+F+P N + +AT
Sbjct: 366 GVYDIAFHTDG-SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSP-NGYHVAT 423
Query: 277 ASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
S D T ++D+R+ ++ + +H V V+++PNH L + A D +W
Sbjct: 424 GSGDNTCKVWDLRQRKC-IYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVED 220
L+GH KE YGL++SP GY V+ GS DN +WD L Q K I + AH+++V
Sbjct: 402 LEGHLKEIYGLNFSP--NGYHVATGSGDNTCKVWD---LRQRKCI---YTIPAHQNLVTG 453
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
V + + N + D IW + + HE +V L + + ++AT S D
Sbjct: 454 VKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQ-LIATCSYD 512
Query: 281 TTVALF 286
T L+
Sbjct: 513 RTFKLW 518
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 59/235 (25%), Positives = 117/235 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H I LWD +ID ++ HE V V +H ++ L
Sbjct: 14 GLSFHP-KRPWILASLHSGVIQLWDYR---MGTLIDR---FDEHEGPVRGVHFH-NSQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ +T++ + H + + F+ N W+++ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVS-ASDDQTIRIWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI-------GDE----- 338
T + +L+ H V + P + V+++S D + + VWD+ + D+
Sbjct: 125 RTC-ISVLTGHNHYVMCASFHPKEDLVVSASLD-QTVRVWDIGALKKKSASPADDLMRFS 182
Query: 339 QLELDAEDGPPELL-FSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
Q+ D G ++ + GH ++ S++ P ++S ADD V++W+M ++
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSG-ADDRQVKLWRMNET 236
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/238 (24%), Positives = 111/238 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L H + L W+ K YL++GS D +WDV K + +E H DV
Sbjct: 361 LSKHKGPIFSLKWNK-KGDYLLTGSVDRTAVVWDV------KAEEWKQQFEFHSGPTLDV 413
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
W +N F ++ D + + + + + H+ EVN + ++P +LA+ S D+
Sbjct: 414 DW--RNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDS 470
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLN 333
T ++++++ T +H L HT+E++ + W +PN + LAS++ D + +WD
Sbjct: 471 TAKIWNIKQSTF-VHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD-- 527
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
AE G ++L S GH+ + +++ N ++ S D ++ +W + +
Sbjct: 528 ----------AELG--KMLCSFNGHREPVYSLAFSPNGEYIASGSLD-KSIHIWSIKE 572
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 59/248 (23%), Positives = 109/248 (43%)
Query: 159 DLR-LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDV-----SALAQDKVIDAM---H 209
D+R L+GH E +WSP L SGS D +W + A+ + I+A+ H
Sbjct: 257 DVRILEGHTSEVCACAWSP-SASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKH 315
Query: 210 VYEAHESVVEDVS---WHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF 266
+DV+ W+ + L + D Q IW L + + H+ + L +
Sbjct: 316 AKGKSNEKSKDVTTLDWNGEG-TLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKW 373
Query: 267 NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRR 326
N +++L T S D T ++D++ H+ V+W N+ + SS D
Sbjct: 374 NKKGDYLL-TGSVDRTAVVWDVKAEEWKQQF-EFHSGPTLDVDWR-NNVSFATSSTDS-- 428
Query: 327 LMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQV 386
M++ L +IG+ + P F+ GH+ +++ W+ +++S +DD+T ++
Sbjct: 429 -MIY-LCKIGETR---------PAKTFT--GHQGEVNCVKWDPTGS-LLASCSDDSTAKI 474
Query: 387 WQMTDSIY 394
W + S +
Sbjct: 475 WNIKQSTF 482
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 58/225 (25%), Positives = 116/225 (51%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFRFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLVD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
DM K T+ + L H +V ++ P+ +LA+++ D R+ +WD + GD +E
Sbjct: 242 DMDKYTM-IRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWDPHT-GDILMEFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D ++S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHVASLADDKMVRFWRIDE 342
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 26/119 (21%), Positives = 61/119 (51%)
Query: 220 DVSWHL----KNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLA 275
++ WH +++ L + ++ ++ IWD+ T + + H + V L+F P +L
Sbjct: 128 NIEWHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILV 187
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
+AS D T+ ++D++ + +L H V+ + P+ ++L S + + +WD+++
Sbjct: 188 SASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPD-SSMLCSVGASKAVFLWDMDK 245
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 200 (75.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 57/231 (24%), Positives = 103/231 (44%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWH 224
L P + Y++SG D I L+D+ ++ V + H+ VE V W+
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWY 108
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPY--NEWVLATASSDTT 282
+ +F S+ D L +WD T Q V E+ V +P ++A +
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQIAD-VFNFEETVYSHHMSPVATKHCLVAVGTRGPK 167
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
V L D++ + HIL H +E+ V W P +E +LA+++ D R +WD+ R + L
Sbjct: 168 VQLCDLKSGSCS-HILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITL 226
Query: 343 DAEDGPPELLF--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
D +G ++ H K++ + +D + +V DN +++W ++
Sbjct: 227 DQHNGKKSQAAESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSN 276
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 54/217 (24%), Positives = 109/217 (50%)
Query: 178 KEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDD 237
K ++ G+ ++ I +WD+ + + +H V D++W+ + N+ S +D
Sbjct: 179 KGNFVAIGTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSED 238
Query: 238 CQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI 297
++ +WD+ T + + ++ HEK+V+ +++N Y VL + S D TV L D R P +
Sbjct: 239 KKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRD---PSNS 295
Query: 298 -LSSHTE-EVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
L TE +V ++ WDP+ E S D + +D A D P + H
Sbjct: 296 GLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTR----------ASDLSPSFII-H 344
Query: 356 GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
H +++S S+N + P ++++ + D +V++W ++++
Sbjct: 345 A-HDSEVSSISYNIHAPNLLATGSADESVKLWDLSNN 380
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 131 VGTKTSSCEVYVFD----CAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGS 186
+GT SS E++ D CA D+ H L+W+ + SGS
Sbjct: 185 IGTMESSIEIWDLDLVCTCATLCTTGTDN--------SHTGPVIDLAWNKEFRNIVASGS 236
Query: 187 HDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR 246
D K+ +WDV A + KV E HE V V+W+ + S D +++ D R
Sbjct: 237 EDKKVKVWDV-ATGKCKV-----TMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGR 290
Query: 247 TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV-PLHILSSHTEEV 305
+ E +V L+++P++E + D TV FD R + P I+ +H EV
Sbjct: 291 DPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEV 350
Query: 306 FQVEWDPNHETVLASSADDRRLMVWDLN 333
+ ++ + +LA+ + D + +WDL+
Sbjct: 351 SSISYNIHAPNLLATGSADESVKLWDLS 378
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/195 (25%), Positives = 95/195 (48%)
Query: 129 NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHD 188
N+V + + +V V+D A C + ++ H+K+ + ++W+ + L+SGS D
Sbjct: 230 NIVASGSEDKKVKVWDVAT------GKCK--VTMEHHEKKVHAVAWNNYTPEVLLSGSRD 281
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTN 248
+ L D +D + + E+ VE ++W +E+ F + D + +D R +
Sbjct: 282 RTVVLKD----GRDPSNSGLKW--STEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRAS 335
Query: 249 QTQQR--VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSS--HTEE 304
+ AH+ EV+ +S+N + +LAT S+D +V L+D+ P I ++ + E
Sbjct: 336 DLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSN-NQPSWIATNKPNAGE 394
Query: 305 VFQVEWDPNHETVLA 319
VF V + + +LA
Sbjct: 395 VFSVSFSADCPFLLA 409
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 196 (74.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/221 (24%), Positives = 101/221 (45%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVY-------EAHESVVEDVSWHLKNENLFGSA 234
++SG D I L+D+ ++ V + H VE V W+ + +F S+
Sbjct: 1 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 60
Query: 235 GDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN--EWVLATASSDTTVALFDMRKMT 292
D L +WD T QT V E+ V +P + ++A + V L D++ +
Sbjct: 61 SFDKTLKVWDTNTLQTAD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 119
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELL 352
HIL H +E+ V W P ++ +LA+++ D R+ +WD+ R + LD +G
Sbjct: 120 CS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 178
Query: 353 F--SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
++ H K++ + +D + +V DN +++W ++
Sbjct: 179 VESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSN 218
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMH-VYEAHESVVEDVSWHLKNENL 230
+ W P G S S D + +WD + L V + VY H S V + H
Sbjct: 47 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVS--TKHCLVA-- 102
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
G+ G QL DL++ ++ H +E+ +S++P +++LATAS+D+ V L+D+R+
Sbjct: 103 VGTRGPKVQLC--DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 160
Query: 291 MTVPLHILSSH 301
+ L L H
Sbjct: 161 ASGCLITLDQH 171
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 202 (76.2 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 60/187 (32%), Positives = 96/187 (51%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
+ L GH + ++ +E +V+GS + LWD+ A K++ + H++ +
Sbjct: 57 MSLTGHTSAVGCIQFNSSEER-VVAGSLSGSLRLWDLEAA---KILRTLM---GHKASIS 109
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
+ +H E L S D + +WD+R R K H + V L+F+P +W LA+AS
Sbjct: 110 SLDFHPMGEYL-ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKW-LASASD 167
Query: 280 DTTVALFDM--RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL---NR 334
D+TV L+D+ KM +SHT V V++ PN E +LAS + DR + +WDL N
Sbjct: 168 DSTVKLWDLIAGKMITEF---TSHTSAVNVVQFHPN-EYLLASGSADRTVKLWDLEKFNM 223
Query: 335 IGDEQLE 341
IG + E
Sbjct: 224 IGSSEGE 230
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/152 (26%), Positives = 76/152 (50%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF-GSAGDDCQL 240
L +G D ++ +W VS + I ++ H S V + ++ E + GS L
Sbjct: 36 LATGGEDCRVNIWAVS---KPNCIMSL---TGHTSAVGCIQFNSSEERVVAGSLSGS--L 87
Query: 241 MIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSS 300
+WDL + + + H+ ++ L F+P E+ LA+ S D+ + L+D+R+
Sbjct: 88 RLWDLEAAKILRTLMGHKASISSLDFHPMGEY-LASGSVDSNIKLWDVRRKGCVFRY-KG 145
Query: 301 HTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
HT+ V + + P+ + LAS++DD + +WDL
Sbjct: 146 HTQAVRCLAFSPDGKW-LASASDDSTVKLWDL 176
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + G+DC++ IW + + H V + FN E
Sbjct: 18 AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEER 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
V+A + S + + L+D+ + L L H + +++ P E LAS + D + +WD+
Sbjct: 78 VVAGSLSGS-LRLWDLEAAKI-LRTLMGHKASISSLDFHPMGE-YLASGSVDSNIKLWDV 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 198 (74.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 62/225 (27%), Positives = 110/225 (48%)
Query: 172 LSWSPFKEG----YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV +++ M H +V D+++
Sbjct: 134 IEWHHFQFGRDQLLLATGLNNGRIKIWDV--YTGTLLLNLMD----HTDIVRDLTFAPDG 187
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRVK-AHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D +L +WDL+ + +V H V +F+P + VL + + V L+
Sbjct: 188 SLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSS-VLCSVGASKAVLLW 246
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
+M K T+ + L H +V E+ P+ +LA+++ D R++VWD R G LEL
Sbjct: 247 NMDKYTL-IRKLEGHHNDVVSCEFSPDG-ALLATASYDTRVIVWDHQR-GSILLELGHLF 303
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S+ D I+SV+DD V+ W + +
Sbjct: 304 PPPSPIFAGGANDRWVRSVSFCA-DGRHIASVSDDRLVRFWSIEE 347
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 197 (74.4 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 57/225 (25%), Positives = 116/225 (51%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFRFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLVD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
+M K T+ + L H +V ++ P+ +LA+++ D R+ +WD + GD +E
Sbjct: 242 NMDKYTM-IRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWDPHN-GDILMEFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D ++S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHVASLADDKMVRFWRIDE 342
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 197 (74.4 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 57/225 (25%), Positives = 116/225 (51%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFRFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLVD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
+M K T+ + L H +V ++ P+ +LA+++ D R+ +WD + GD +E
Sbjct: 242 NMDKYTM-IRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWDPHN-GDILMEFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D ++S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHVASLADDKMVRFWRIDE 342
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 204 (76.9 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 58/237 (24%), Positives = 117/237 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILASLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRIWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED---- 346
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L A D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVDTEVR 182
Query: 347 --------GPPELLFSH---GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ + P ++S ADD V++W+M +S
Sbjct: 183 GISGVDLFGASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSG-ADDRQVKIWRMNES 238
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 196 (74.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 61/225 (27%), Positives = 114/225 (50%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W FK G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFKFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLMD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSS-ILCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
DM K ++ + L H +V E+ P+ +LA+++ D R+ VWD IG E
Sbjct: 242 DMDKYSM-IRKLEGHHNDVVACEFSPDG-ALLATASYDTRVYVWD-PYIGVILREFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D I+S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHIASLADDKMVRFWRIDE 342
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 35/156 (22%), Positives = 73/156 (46%)
Query: 185 GSHDNKIC--LWDVSALAQDKVIDAMHVYEAHESVVEDVSWHL----KNENLFGSAGDDC 238
GS NK C + D + + V E V ++ WH +++ L + ++
Sbjct: 93 GSQRNKPCEHIIDCGDIVWSLAFGSS-VPEKQSRCV-NIEWHRFKFGQDQLLLATGLNNG 150
Query: 239 QLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
++ IWD+ T + + H + V L+F P +L +AS D T+ ++D++ + +L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
H V+ + P+ ++L S + + +WD+++
Sbjct: 211 RGHQNWVYGCAFSPD-SSILCSVGASKAVFLWDMDK 245
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 196 (74.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 61/225 (27%), Positives = 114/225 (50%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W FK G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFKFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLMD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSS-ILCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
DM K ++ + L H +V E+ P+ +LA+++ D R+ VWD IG E
Sbjct: 242 DMDKYSM-IRKLEGHHNDVVACEFSPDG-ALLATASYDTRVYVWD-PYIGVILREFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D I+S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHIASLADDKMVRFWRIDE 342
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 35/156 (22%), Positives = 73/156 (46%)
Query: 185 GSHDNKIC--LWDVSALAQDKVIDAMHVYEAHESVVEDVSWHL----KNENLFGSAGDDC 238
GS NK C + D + + V E V ++ WH +++ L + ++
Sbjct: 93 GSQRNKPCEHIIDCGDIVWSLAFGSS-VPEKQSRCV-NIEWHRFKFGQDQLLLATGLNNG 150
Query: 239 QLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
++ IWD+ T + + H + V L+F P +L +AS D T+ ++D++ + +L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
H V+ + P+ ++L S + + +WD+++
Sbjct: 211 RGHQNWVYGCAFSPD-SSILCSVGASKAVFLWDMDK 245
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 199 (75.1 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 49/197 (24%), Positives = 97/197 (49%)
Query: 136 SSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWD 195
S C + VFD + + D P + + K LSW+ ++ ++ S ++ + +WD
Sbjct: 392 SRC-IKVFDFSSVVNEPADMQCPIVEMSTRSKLSC-LSWNKHEKNHIASSDYEGIVTVWD 449
Query: 196 VSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK 255
V+ + +++ YE HE V + ++ S DDC++ +W R + +
Sbjct: 450 VTT--RQSLME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINID 503
Query: 256 AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHE 315
+ + + +NP + +A S+D + +D+R ++ PLH+ S H + V V++ N+E
Sbjct: 504 M-KANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNE 562
Query: 316 TVLASSADDRRLMVWDL 332
LAS++ D L +WD+
Sbjct: 563 --LASASTDSTLRLWDV 577
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 41/169 (24%), Positives = 80/169 (47%)
Query: 127 KPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGS 186
+P+++ + + C+V V+ C +Q E + D + + ++P Y+ GS
Sbjct: 475 EPSMLVSGSDDCKVKVW-CTRQ-EASVINIDMKANI-------CCVKYNPGSSNYIAVGS 525
Query: 187 HDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR 246
D+ I +D+ ++Q +HV+ H+ V V + L N L SA D L +WD++
Sbjct: 526 ADHHIHYYDLRNISQP-----LHVFSGHKKAVSYVKF-LSNNEL-ASASTDSTLRLWDVK 578
Query: 247 TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL 295
N + + H E N++ +E+ LA S V ++ +++T P+
Sbjct: 579 DNLPVRTFRGHTNEKNFVGLTVNSEY-LACGSETNEVYVYH-KEITRPV 625
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 202 (76.2 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 45/167 (26%), Positives = 88/167 (52%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
L ++PF+ L SG+ D++I +WD++ L+ + ++ +SW+L+ +++
Sbjct: 127 LDFNPFQGNLLASGASDSEIFIWDLNHLSVPMTPGPKSQNPPED--IKALSWNLQVQHIL 184
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNY--LSFNPYNEWVLATASSDT---TVALF 286
SA + ++WDLR N+ +V +H +N L++NP L S D + L+
Sbjct: 185 ASAHPSGKAVVWDLRKNEPIIKVSSHSSRMNCSGLAWNPDIATQLVLCSEDDQLPVIQLW 244
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
D+R + PL +L SH+ + + W+ +L S+A D ++ W+L+
Sbjct: 245 DLRFASSPLKVLESHSRGILSMSWNQADAELLLSTAKDSQIFCWNLS 291
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 196 (74.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 50/177 (28%), Positives = 93/177 (52%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH ++W P +L + +D LWD+ A Q++++ H E
Sbjct: 310 DSDEPVADIEGHTVRVARVTWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 362
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 363 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYH 420
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 421 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 476
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 155 DCDPDLRLKGHDKEGYGLSWSPF-------KEGYLVSGSHDNKICLWDVSALAQDKVIDA 207
DC+ L+GH+ + + P K+ L S + D + LW + + + V D
Sbjct: 261 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS--DEPVADI 318
Query: 208 MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFN 267
E H V V+WH L G+ D +WDL + + H V ++F+
Sbjct: 319 ----EGHTVRVARVTWHPSGRFL-GTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 373
Query: 268 PYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRL 327
+ T D ++D+R + L H +E++ + + PN + A+ + D
Sbjct: 374 QDGS-LAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGINFSPNGYHI-ATGSGDNTC 430
Query: 328 MVWDLNR 334
VWDL +
Sbjct: 431 KVWDLRQ 437
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 196 (74.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/177 (28%), Positives = 92/177 (51%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH + W P +L + +D LWD+ A Q++++ H E
Sbjct: 310 DSDEPVADIEGHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 362
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ +SF+P N +
Sbjct: 363 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSP-NGYH 420
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 421 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/167 (27%), Positives = 85/167 (50%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
L ++PF+ L SG+ D++I +WD++ L + + ++ +SW+ + +++
Sbjct: 127 LDFNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPED--IKALSWNRQVQHIL 184
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNY--LSFNPYNEWVLATASSDT---TVALF 286
SA + ++WDLR N+ +V H +N L++NP L S D + L+
Sbjct: 185 SSAHPSGKAVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLW 244
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
D+R + PL +L SH+ + V W +L SSA D ++ W+L+
Sbjct: 245 DLRFASSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLS 291
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/236 (24%), Positives = 115/236 (48%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H+ I LWD +ID ++ H+ V + +H K + L
Sbjct: 14 GLSFHP-KRPWILTSLHNGVIQLWDYRMCT---LIDK---FDEHDGPVRGIDFH-KQQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAE 345
T + +L+ H V ++ P + V+++S D + + VWD++ + + L E D
Sbjct: 125 RTC-VCVLTGHNHYVMCAQFHPTEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVR 182
Query: 346 D-------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 183 GITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 237
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 57/234 (24%), Positives = 110/234 (47%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
++WS L + + + + +WD+S + K + VY HE V++H N+
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQK---QLLVYNEHERTAHTVTFHSSEPNIL 127
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
S D + +D+R++++ + + V + F+P+ + + + S + TV L+DMRK
Sbjct: 128 ISGSQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKW 187
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN-RIGDEQ-LELDAEDGP- 348
+ ++H V+ +W P LA+ + D+++ VW+++ R G E + A G
Sbjct: 188 DKCMVQFTAHYGPVYTCDWHPTRNW-LATGSRDKQIKVWNMDGRPGLEHTIHTIAVVGRV 246
Query: 349 ---PELLFSHGGHKAKISDFS---WNKNDPWV-ISSVADDNTVQV---WQMTDS 392
PE + H A + D+S W+ P++ +S + V WQ +DS
Sbjct: 247 KWRPERTY-HIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDS 299
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 55/210 (26%), Positives = 99/210 (47%)
Query: 129 NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHD 188
NL+ T ++ V V+D +K ++Q L H++ + +++ + L+SGS D
Sbjct: 79 NLLATAATNGVVSVWDLSKFGRQKQL-----LVYNEHERTAHTVTFHSSEPNILISGSQD 133
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT- 247
I +D+ + DK I+ Y + V DV + +N+F + ++ + +WD+R
Sbjct: 134 GTIKCFDIRS---DKSINT---YFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKW 187
Query: 248 NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVF- 306
++ + AH V ++P W LAT S D + +++M H + HT V
Sbjct: 188 DKCMVQFTAHYGPVYTCDWHPTRNW-LATGSRDKQIKVWNMDGRPGLEHTI--HTIAVVG 244
Query: 307 QVEWDPNHETVLASSA--DDRRLMVWDLNR 334
+V+W P +AS A D + VWD+ R
Sbjct: 245 RVKWRPERTYHIASCALVVDYSVHVWDIRR 274
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/173 (20%), Positives = 80/173 (46%)
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLSFNPYNEWVLAT 276
DV+W + NL +A + + +WDL Q+++ HE+ + ++F+ +L +
Sbjct: 70 DVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILIS 129
Query: 277 ASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
S D T+ FD+R ++ ++E V V++ P+ + + ++ +++ + +WD+ +
Sbjct: 130 GSQDGTIKCFDIRS-DKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWD 188
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
++ A GP + W+ W+ + + D ++VW M
Sbjct: 189 KCMVQFTAHYGP-------------VYTCDWHPTRNWLATG-SRDKQIKVWNM 227
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 44/183 (24%), Positives = 81/183 (44%)
Query: 207 AMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLS 265
+++ Y + V DV + +N+F + ++ + +WD+R ++ + AH V
Sbjct: 146 SINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCD 205
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVF-QVEWDPNHETVLASSA-- 322
++P W LAT S D + +++M H + HT V +V+W P +AS A
Sbjct: 206 WHPTRNW-LATGSRDKQIKVWNMDGRPGLEHTI--HTIAVVGRVKWRPERTYHIASCALV 262
Query: 323 DDRRLMVWDLNRIGDEQLELDAEDGPPELLF-SHGGHKAKISDFSWNKNDPWVISSVADD 381
D + VWD+ R P + F S H + +W +D + S++ D
Sbjct: 263 VDYSVHVWDIRR--------------PYIPFASFNEHTNVTTGIAWQGSDSHCLLSISKD 308
Query: 382 NTV 384
+T+
Sbjct: 309 STI 311
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 189 (71.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 65/273 (23%), Positives = 123/273 (45%)
Query: 121 ARCMPQKPNLVGTKTSSC--EVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFK 178
+RC N GT ++C + + K+ + + C + GH + ++WSP
Sbjct: 17 SRCWYVAWNPAGTTLATCGGDRAIRIWGKEGDSWECKC---VLSDGHQRTVRKVAWSPCG 73
Query: 179 EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDC 238
+ YL S S D C+W + D+ + + V E HE+ V+ V+W + +L + D
Sbjct: 74 K-YLASASFDATTCIWKKT----DEDFECLTVLEGHENEVKCVAW-APSGSLLATCSRDK 127
Query: 239 QLMIWDLRTNQTQQR---VKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL 295
+ IW++ + V +H ++V ++ ++P E +LA+AS D + ++
Sbjct: 128 SVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQE-LLASASYDNKICIYKEEDDDWEC 186
Query: 296 HI-LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFS 354
L H V+ + +DP LAS +DDR + +W + GD +++ +
Sbjct: 187 RATLEGHESTVWSLTFDPEGRR-LASCSDDRTVKIWKESTTGDGS----SDESWKCICTL 241
Query: 355 HGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
G H I D +W + + ++ DD V+V+
Sbjct: 242 SGFHGRTIYDIAWCRLTGALATACGDDG-VRVF 273
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 61/254 (24%), Positives = 112/254 (44%)
Query: 150 EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMH 209
+K +D + L+GH+ E ++W+P L + S D + +W+V +D+ + +
Sbjct: 89 KKTDEDFECLTVLEGHENEVKCVAWAP-SGSLLATCSRDKSVWIWEVDE--EDEY-ECLS 144
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR--VKAHEKEVNYLSFN 267
V +H V+ V WH E L SA D ++ I+ + + R ++ HE V L+F+
Sbjct: 145 VVNSHTQDVKHVVWHPTQE-LLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFD 203
Query: 268 PYNEWVLATASSDTTVALFDMRKMTVP----------LHILSS-HTEEVFQVEWDPNHET 316
P LA+ S D TV ++ ++ T + LS H ++ + W
Sbjct: 204 PEGRR-LASCSDDRTVKIW--KESTTGDGSSDESWKCICTLSGFHGRTIYDIAWC-RLTG 259
Query: 317 VLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKNDPWV 374
LA++ D D R+ E D E P L +H H ++ SWN + +
Sbjct: 260 ALATACGD------DGVRVFSEDPTADPEQ-PIFALSAHVPKAHNQDVNCVSWNPKEAGL 312
Query: 375 ISSVADDNTVQVWQ 388
+++ +D+ +W+
Sbjct: 313 LATCSDNGEFAIWK 326
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 52/238 (21%), Positives = 98/238 (41%)
Query: 114 VDGEVNRARCMPQKPN--LVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYG 171
++G N +C+ P+ L+ T + V++++ E+ + +C + H ++
Sbjct: 101 LEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD---EEDEYECLSVVN--SHTQDVKH 155
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
+ W P +E L S S+DNKIC++ +D + E HES V +++ + L
Sbjct: 156 VVWHPTQE-LLASASYDNKICIYK----EEDDDWECRATLEGHESTVWSLTFDPEGRRLA 210
Query: 232 GSAGDDCQLMIWDLRTNQ--TQQRVKAHEKEVNYLSFNPYN-EW-----VLATASSDTTV 283
+ D + + T + + K + Y+ W LATA D V
Sbjct: 211 SCSDDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGV 270
Query: 284 ALFDMRKMTVP--------LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
+F P H+ +H ++V V W+P +LA+ +D+ +W N
Sbjct: 271 RVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWKYN 328
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 44/201 (21%), Positives = 90/201 (44%)
Query: 205 IDAMHVYEAH-ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKE 260
++ H AH +S V+W+ L + G D + IW + + + H++
Sbjct: 5 LELQHRVSAHPDSRCWYVAWNPAGTTL-ATCGGDRAIRIWGKEGDSWECKCVLSDGHQRT 63
Query: 261 VNYLSFNPYNEWVLATASSDTTVALFDMRKMTVP-LHILSSHTEEVFQVEWDPNHETVLA 319
V ++++P ++ LA+AS D T ++ L +L H EV V W P+ ++LA
Sbjct: 64 VRKVAWSPCGKY-LASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWAPSG-SLLA 121
Query: 320 SSADDRRLMVWDLNRIGD-EQLEL---DAED------GPPELLFSHGGHKAKISDFSWNK 369
+ + D+ + +W+++ + E L + +D P + L + + KI + +
Sbjct: 122 TCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYK-EE 180
Query: 370 NDPWVISSVADDNTVQVWQMT 390
+D W + + + VW +T
Sbjct: 181 DDDWECRATLEGHESTVWSLT 201
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH + W P +L + +D LWD+ A Q++++ H E
Sbjct: 311 DSDEPVADIEGHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 363
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 364 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYH 421
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 422 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 44/187 (23%), Positives = 76/187 (40%)
Query: 155 DCDPDLRLKGHDKEGYGLSWSPF-------KEGYLVSGSHDNKICLWDVSALAQDKVIDA 207
DC+ L+GH+ + + P K+ L S + D + LW + + + V D
Sbjct: 262 DCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS--DEPVADI 319
Query: 208 MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFN 267
E H V V WH L G+ D +WDL + + H V ++F+
Sbjct: 320 ----EGHTVRVARVMWHPSGRFL-GTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFH 374
Query: 268 PYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRL 327
+ T D ++D+R + L H +E++ + + PN + A+ + D
Sbjct: 375 QDGS-LAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGINFSPNGYHI-ATGSGDNTC 431
Query: 328 MVWDLNR 334
VWDL +
Sbjct: 432 KVWDLRQ 438
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH + W P +L + +D LWD+ A Q++++ H E
Sbjct: 326 DSDEPVADIEGHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 378
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 379 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYH 436
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 437 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 492
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 194 (73.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH + W P +L + +D LWD+ A Q++++ H E
Sbjct: 328 DSDEPVADIEGHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 380
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 381 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYH 438
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 439 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 494
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 189 (71.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 62/232 (26%), Positives = 111/232 (47%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+GH + ++WSP YL S S D C+W + +D + + E HE+ V+ V+
Sbjct: 58 EGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKN---KDD-FECVTTLEGHENEVKSVA 112
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRT-NQTQQ--RVKAHEKEVNYLSFNPYNEWVLATASS 279
W + NL + D + +W+ NQ RV + + + ++P E +LA+AS
Sbjct: 113 W-APSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQE-LLASASY 170
Query: 280 DTTVALF-DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDE 338
D TV L+ + V L H V+ + +DP+ + LAS +DDR + +W G+E
Sbjct: 171 DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLPGNE 229
Query: 339 Q-LELDAEDGPPELLFSHGG-HKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
Q + + D + + + G H I D +W + + ++ DD ++V++
Sbjct: 230 QGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGDD-AIRVFE 280
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/261 (22%), Positives = 111/261 (42%)
Query: 150 EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMH 209
+K +DD + L+GH+ E ++W+P L + S D + +W+ +++ D
Sbjct: 89 KKNKDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWE--GTVENQPSDPTR 145
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ-QRVKAHEKEVNYLSFNP 268
V +S+ + V WH E L ++ DD + + + ++ HE V L+F+P
Sbjct: 146 VPYKPQSM-KKVLWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP 204
Query: 269 YNEWVLATASSDTTVALFDM----RKMTVPLH----------ILSS-HTEEVFQVEWDPN 313
+ LA+ S D TV ++ + V + LS H+ ++ V W
Sbjct: 205 SGQR-LASCSDDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWC-Q 262
Query: 314 HETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKND 371
LA++ D D R+ +E D + P L +H H ++ +WN +
Sbjct: 263 LTGALATACGD------DAIRVFEEDPGSDPQQ-PTFSLTAHLPQAHSQDVNCVAWNPKE 315
Query: 372 PWVISSVADDNTVQVWQMTDS 392
+++S +DD + W+ S
Sbjct: 316 QGLLASCSDDGELAFWKYQPS 336
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 189 (71.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/232 (27%), Positives = 113/232 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH +G W P ++ L + D I +W + + + + H + DV
Sbjct: 10 LSGHRGRVWGAGWHP-RDPVLATCGEDKTIRIWADDGTG--RWVPKTVLSDGHTRTIRDV 66
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATASS 279
+W L SA D + IWD R+ + + ++ HE EV +S++ +LAT S
Sbjct: 67 AWSPCGRFL-ASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGA-LLATCSR 124
Query: 280 DTTVALFDMRKMTVP--LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
D +V ++++ + +L++H+++V +VEW PN E VLAS++ D + ++
Sbjct: 125 DKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPN-EDVLASASYDNTIQLYR------ 177
Query: 338 EQLELDAEDGPPELLFSHGGHKAKIS-DFSWNKNDPWVISSVADDNTVQVWQ 388
E L D++ + L SH I+ D S ++ ++S +DD TV++WQ
Sbjct: 178 EDLA-DSDWSSFDTLASHDSTVWSIAFDASGSR-----LASCSDDQTVRIWQ 223
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 62/263 (23%), Positives = 113/263 (42%)
Query: 150 EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSG-SHDNKICLWDVSALAQDKVIDAM 208
+++ + + + L+GH+ E +SWS K G L++ S D + +W+V AQ+ +
Sbjct: 88 DRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSRDKSVWIWEV---AQEDEYECA 142
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIW--DLRTNQTQQ--RVKAHEKEVNYL 264
V H V+ V WH NE++ SA D + ++ DL + + +H+ V +
Sbjct: 143 AVLNTHSQDVKKVEWH-PNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSI 201
Query: 265 SFNPYNEWVLATASSDTTVALFDMRK------MTVP---------LHILSS-HTEEVFQV 308
+F+ LA+ S D TV ++ K + P + LS H+ V+ +
Sbjct: 202 AFDASGSR-LASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDI 260
Query: 309 EWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWN 368
W + + DD MV RI E A + E++ S H + W+
Sbjct: 261 SWCKKTGLIATACGDD---MV----RIFREVAGSPANEPTFEMVASKHAHSQDANTVEWS 313
Query: 369 KNDPWVISSVADDNTVQVWQMTD 391
++ + +DD V++W+ D
Sbjct: 314 PTVAGLLVTTSDDGDVKLWKFED 336
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD S+ + +H Y H V V +H + +AG D +
Sbjct: 122 IVSASDDKTVKLWDKSSR------ECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTVK 174
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD+RT++ Q + H VN LSF+P +++ TASSD+T+ + D+ + + L+ L H
Sbjct: 175 VWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYTLHGH 232
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAK 361
V + E AS D ++MVW N + E+ PP L S G+ +
Sbjct: 233 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPE 291
Query: 362 ISDF 365
+ DF
Sbjct: 292 V-DF 294
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 18 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVR 69
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++ F +A DD + +W + + H V F+P ++ +AS
Sbjct: 70 SVHFCSDGQS-FVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASD 127
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D TV L+D +H H V V++ P+ T +A++ D + VWD+
Sbjct: 128 DKTVKLWDKSSREC-VHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDV 178
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH + W P +L + +D LWD+ A Q++++ H E
Sbjct: 310 DSDEPVADIEGHTVRVARVMWHPSGR-FLGTTCYDRSWRLWDLEA--QEEIL---H-QEG 362
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+++H ++ +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 363 HSMGVYDIAFH-QDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYH 420
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D T ++D+R+ ++ + +H V V+++P H L + A D +W
Sbjct: 421 IATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 191 (72.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 61/225 (27%), Positives = 113/225 (50%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W FK G L +G ++ +I +WDV K++ +++ + H +V D+++
Sbjct: 130 IEWHRFKFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLMD-HTDIVRDLTFAPDG 183
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + VL + + V L+
Sbjct: 184 SLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSS-VLCSVGAGKAVFLW 242
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
DM K T+ + L H +V E+ P+ +LA+++ D R++VWD + LEL
Sbjct: 243 DMDKYTL-IRKLEGHHNDVVCCEFSPDG-ALLATASYDTRVIVWDPHT-ATVLLELGHLF 299
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + ++ +D I+SV DD V+ W + +
Sbjct: 300 PPPSPIFAGGANDRWVRSVAFC-HDGRHIASVTDDRLVRFWSIDE 343
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 209 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 260
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 261 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 319
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 371
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 372 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 163 (62.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 234 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 286
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 287 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 346 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 403
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 404 RNRPGDK 410
Score = 135 (52.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 127 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 177
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 178 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 235
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 236 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 341 ELDAEDGPPE 350
E+DA GPPE
Sbjct: 1233 EMDAPGGPPE 1242
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 205 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 256
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 257 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 315
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 316 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 367
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 368 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 398
Score = 163 (62.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 230 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 282
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 283 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 341
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 342 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 399
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 400 RNRPGDK 406
Score = 135 (52.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 123 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 173
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 174 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 231
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 232 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 270
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 330 WDLNRIGDEQLELDAED 346
W+ R GDE+ D +D
Sbjct: 1067 WEGRRPGDERFPRDPDD 1083
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 209 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 260
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 261 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 319
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 371
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 372 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 234 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 286
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 287 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 346 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 403
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 404 RNRPGDK 410
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 127 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 177
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 178 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 235
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 236 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 209 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 260
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 261 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 319
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 371
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 372 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 163 (62.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 234 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 286
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 287 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 346 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 403
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 404 RNRPGDK 410
Score = 135 (52.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 127 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 177
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 178 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 235
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 236 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Score = 42 (19.8 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 330 WDLNRIGDEQLELDAED 346
W+ R GDE+ D ED
Sbjct: 1077 WEGRRPGDERFPRDPED 1093
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 209 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 260
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 261 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 319
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 371
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 372 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 163 (62.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 234 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 286
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 287 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 346 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 403
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 404 RNRPGDK 410
Score = 135 (52.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 127 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 177
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 178 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 235
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 236 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Score = 42 (19.8 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 330 WDLNRIGDEQLELDAED 346
W+ R GDE+ D ED
Sbjct: 1077 WEGRRPGDERFPRDPED 1093
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 209 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 260
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 261 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 319
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 371
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 372 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 402
Score = 163 (62.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 234 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 286
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 287 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 345
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 346 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 403
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 404 RNRPGDK 410
Score = 135 (52.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 127 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 177
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 178 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 235
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 236 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 274
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 330 WDLNRIGDEQLELDAED 346
W+ R GD++ D ED
Sbjct: 1077 WEGRRPGDDRFPRDPED 1093
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 194 (73.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGPPE-LLFSHGG 357
++ E GP +LF+ G
Sbjct: 224 VSC-IEGEPGPVRSILFNPDG 243
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 190 (71.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD S+ + +H Y H V V +H + +AG D +
Sbjct: 160 IVSASDDKTVKLWDKSSR------ECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTVK 212
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD+RT++ Q + H VN LSF+P +++ TASSD+T+ + D+ + + L+ L H
Sbjct: 213 VWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYTLHGH 270
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAK 361
V + E AS D ++MVW N + E+ PP L S G+ +
Sbjct: 271 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPE 329
Query: 362 ISDF 365
+ DF
Sbjct: 330 V-DF 332
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 56 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVR 107
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++ F +A DD + +W + + H V F+P ++ +AS
Sbjct: 108 SVHFCSDGQS-FVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASD 165
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D TV L+D +H H V V++ P+ T +A++ D + VWD+
Sbjct: 166 DKTVKLWDKSSREC-VHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDV 216
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/135 (24%), Positives = 66/135 (48%)
Query: 200 AQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEK 259
A+D ++ H ++ H V V + + + L + D C LM+W ++ R H+
Sbjct: 6 AEDPSLER-H-FKGHRDAVTCVDFSINTKQLASGSMDSC-LMVWHMKPQSRAYRFTGHKD 62
Query: 260 EVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLA 319
V ++F+P +LA+ S D TV ++ + + + +HT V V + + ++ +
Sbjct: 63 AVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVT 120
Query: 320 SSADDRRLMVWDLNR 334
+S DD+ + VW +R
Sbjct: 121 AS-DDKTVKVWATHR 134
>UNIPROTKB|E1BWN6 [details] [associations]
symbol:CORO2A "Coronin" species:9031 "Gallus gallus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OMA:LLQMFYR EMBL:AADN02060086
EMBL:AADN02060087 IPI:IPI00680995 RefSeq:XP_424946.3
UniGene:Gga.52392 Ensembl:ENSGALT00000002987 GeneID:427373
KEGG:gga:427373 Uniprot:E1BWN6
Length = 522
Score = 192 (72.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 63/212 (29%), Positives = 95/212 (44%)
Query: 152 QQDDCDPDL-RLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSA-LAQDKVIDAMH 209
Q DP R+ GH + W+PF + + S S D + +WD+ L +
Sbjct: 67 QTGKLDPHYPRICGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKK 126
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQT--QQRVK---AHEKEVNYL 264
H V + WH N+ S+G D ++MIW+L T + VK AH+ V +
Sbjct: 127 ELLGHARRVGLIEWHPTANNILFSSGHDYKIMIWNLDTREDVLSNPVKILDAHKDVVLSM 186
Query: 265 SFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA-- 322
SFN +LATA D + L D R TV L S +V + N + +L++
Sbjct: 187 SFNTDGS-LLATACRDKKIRLIDPRARTV-LQEASYKAHRANKVLFLGNMKKLLSTGTSR 244
Query: 323 -DDRRLMVWDLNRIGDEQLELDAEDGPPELLF 353
++R++ +WD N + LE D DG LLF
Sbjct: 245 WNNRQIALWDQNDLSVPLLEEDL-DGSSGLLF 275
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/140 (27%), Positives = 69/140 (49%)
Query: 253 RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK------MTVPLHILSSHTEEVF 306
R+ H+ V + +NP+N++V+A+ S D TV ++D+ K +T P L H V
Sbjct: 77 RICGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKKELLGHARRVG 136
Query: 307 QVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFS 366
+EW P +L SS D ++M+W+L+ D P ++L HK + S
Sbjct: 137 LIEWHPTANNILFSSGHDYKIMIWNLDT------REDVLSNPVKIL---DAHKDVVLSMS 187
Query: 367 WNKNDPWVISSVADDNTVQV 386
+N D ++++ D +++
Sbjct: 188 FN-TDGSLLATACRDKKIRL 206
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 198 (74.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 59/217 (27%), Positives = 97/217 (44%)
Query: 173 SWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
S+SP + + S D + +WD +++++ H + V+ V WH + L
Sbjct: 210 SFSP-TDNKFATCSDDGTVRIWDFLRCHEERIL------RGHGADVKCVDWH-PTKGLVV 261
Query: 233 SAGDDCQ--LMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
S D Q + WD +T Q+ + AH+ V + N W+L TAS D LFD+R
Sbjct: 262 SGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRN 320
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+ L + H +E V W P HE + AS D L+ W +G E+ E G E
Sbjct: 321 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGME 372
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
+ H+ I +W+ ++ S ++D+T + W
Sbjct: 373 M-----AHEGMIWSLAWHPLGH-ILCSGSNDHTSKFW 403
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/187 (26%), Positives = 91/187 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK--ICLWDVSALAQDKVIDAMHVYEA 213
C + L+GH + + W P K G +VSGS D++ I WD K ++ A
Sbjct: 235 CHEERILRGHGADVKCVDWHPTK-GLVVSGSKDSQQPIKFWD------PKTGQSLATLHA 287
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEW 272
H++ V +V +L N N +A D ++D+R + + +V + H+KE ++++P +E
Sbjct: 288 HKNTVMEVKLNL-NGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEG 346
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP-NHETVLASSADDRRLMVWD 331
+ A+ SD ++ + + + +H ++ + W P H +L S ++D W
Sbjct: 347 LFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGH--ILCSGSNDHTSKFWT 404
Query: 332 LNRIGDE 338
NR GD+
Sbjct: 405 RNRPGDK 411
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
W+P EG LV+G+ + LW+ + ++ +AH+S V ++W N+
Sbjct: 128 WTP--EGRRLVTGASSGEFTLWNGLTFNFETIL------QAHDSPVRAMTWS-HNDMWML 178
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+A + W N + +AH++ + SF+P + AT S D TV ++D +
Sbjct: 179 TADHGGYVKYWQSNMNNVKM-FQAHKEAIREASFSPTDN-KFATCSDDGTVRIWDFLRCH 236
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRR-LMVWD 331
IL H +V V+W P V++ S D ++ + WD
Sbjct: 237 EE-RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWD 275
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 188 (71.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 56/232 (24%), Positives = 109/232 (46%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+ H K ++WSP Y+ S S D + +W +S ++A+ E H S V+ V+
Sbjct: 57 EAHKKSIRCVTWSPCGT-YIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVA 115
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKA---HEKEVNYLSFNPYNEWVLATASS 279
W + +L + G D + +W+ + Q V H ++V ++++P+ E VL + S
Sbjct: 116 W-CPSGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGE-VLVSTSY 173
Query: 280 DTTVALF--DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
D + ++ ++ TV LS H V++ E+ P+ + +LAS +DD + +W +
Sbjct: 174 DNKINVYREELDDWTVFAQ-LSGHDSTVWKAEFSPSGD-ILASCSDDLCVKLWSWEGVCG 231
Query: 338 EQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+ + G H I D +W+ D +++S DN + +++M
Sbjct: 232 KSSSWMC------IATLSGYHTRTIFDLNWSP-DSQLLASCGSDNRLCIYKM 276
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 52/235 (22%), Positives = 104/235 (44%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSG-SHDNKICLWDVSALAQDKVIDAMHVYEAHESVVED 220
L+GH E ++W P G+L++ D + LW+ ++ + + V + H V+
Sbjct: 104 LEGHTSEVKCVAWCP--SGHLIATCGRDKSVWLWEFD---DEEDVQCVSVLQPHSQDVKS 158
Query: 221 VSWHLKNENLFGSAGDDCQLMIW--DLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATAS 278
V+WH E L ++ D+ ++ ++ +L ++ H+ V F+P + +LA+ S
Sbjct: 159 VAWHPHGEVLVSTSYDN-KINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGD-ILASCS 216
Query: 279 SDTTVALFDMRKMT------VPLHILSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
D V L+ + + + LS HT +F + W P+ + +LAS D RL ++
Sbjct: 217 DDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQ-LLASCGSDNRLCIYK 275
Query: 332 LNRIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ G + P +L+ H H ++ W P I+ ++ ++
Sbjct: 276 MPANGLTHIGGKPCFEEPPVLWGHVPNAHSEDVNCVRWK---PGNITDISHSESI 327
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 63/239 (26%), Positives = 112/239 (46%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVI-DAMHVYEAHESVVE 219
+LK +K + LSW+ K L+S D I LW A D++ + + EAH+ +
Sbjct: 9 KLKASNKRLWSLSWN-HKGSVLISSGEDRVIKLW---AKCNDQLWGSSFSLPEAHKKSIR 64
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKA------HEKEVNYLSFNPYNEWV 273
V+W + SA D + IW + + ++A H EV +++ P +
Sbjct: 65 CVTWSPCGTYI-ASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGH-L 122
Query: 274 LATASSDTTVAL--FDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
+AT D +V L FD + + +L H+++V V W P+ E ++++S D
Sbjct: 123 IATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYD-------- 174
Query: 332 LNRIGDEQLELDAEDGPPELLFSH-GGHKAKI--SDFSWNKNDPWVISSVADDNTVQVW 387
N+I + ELD D +F+ GH + + ++FS D +++S +DD V++W
Sbjct: 175 -NKINVYREELD--DWT---VFAQLSGHDSTVWKAEFS-PSGD--ILASCSDDLCVKLW 224
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 187 (70.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 61/238 (25%), Positives = 109/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + AH ++V + ++P + +LA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD-ILASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F ++ LSSHT V+ +++D + L S +DD+ L +W G+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDR-LVSCSDDKTLKIWRAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
+ D + + G H I D SW K + + DD +++++ T DS
Sbjct: 229 DAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDG-IRIFKETSDS 285
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 44/183 (24%), Positives = 87/183 (47%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + +W L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A +L H + W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAA------VL---NAHTQDVKRVVWHPTKD-ILASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 59/232 (25%), Positives = 110/232 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W +S K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRVWSLSGNTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L++HT++V +V W P + +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMF------ 175
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+ +LD++ L SH I DF + D V S +DD T+++W+
Sbjct: 176 -AESQLDSDWDCTATLSSHTSTVWSI-DFD-AEGDRLV--SCSDDKTLKIWR 222
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/278 (20%), Positives = 109/278 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQT 250
+ +W+V A D + V AH V+ V WH + L ++ D+ M + + +
Sbjct: 127 VWIWEV---AGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSD 183
Query: 251 QQ---RVKAHEKEVNYLSFNPYNE-------------WVLATASSDTTVALFDMRKMTVP 294
+ +H V + F+ + W +D +A D + +
Sbjct: 184 WDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKC 243
Query: 295 LHILSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLF 353
+ LS H+ ++ V W ++A+ D + ++ D + + E +L
Sbjct: 244 VCTLSGQHSRAIYDVSWC-KLTGLIATGCGDDGIRIF--KETSDSKRD---EPTFEQLTA 297
Query: 354 SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
H+ ++ WN + S +DD T+++W++ D
Sbjct: 298 EETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 187 (70.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 61/238 (25%), Positives = 109/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + AH ++V + ++P + +LA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD-ILASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F ++ LSSHT V+ +++D + L S +DD+ L +W G+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDR-LVSCSDDKTLKIWRAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
+ D + + G H I D SW K + + DD +++++ T DS
Sbjct: 229 DAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDG-IRIFKETSDS 285
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 44/183 (24%), Positives = 87/183 (47%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + +W L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A +L H + W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAA------VL---NAHTQDVKRVVWHPTKD-ILASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 59/232 (25%), Positives = 110/232 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W +S K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRVWSLSGNTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L++HT++V +V W P + +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMF------ 175
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+ +LD++ L SH I DF + D V S +DD T+++W+
Sbjct: 176 -AESQLDSDWDCTATLSSHTSTVWSI-DFD-AEGDRLV--SCSDDKTLKIWR 222
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/278 (20%), Positives = 109/278 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQT 250
+ +W+V A D + V AH V+ V WH + L ++ D+ M + + +
Sbjct: 127 VWIWEV---AGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSD 183
Query: 251 QQ---RVKAHEKEVNYLSFNPYNE-------------WVLATASSDTTVALFDMRKMTVP 294
+ +H V + F+ + W +D +A D + +
Sbjct: 184 WDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKC 243
Query: 295 LHILSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLF 353
+ LS H+ ++ V W ++A+ D + ++ D + + E +L
Sbjct: 244 VCTLSGQHSRAIYDVSWC-KLTGLIATGCGDDGIRIF--KETSDSKRD---EPTFEQLTA 297
Query: 354 SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
H+ ++ WN + S +DD T+++W++ D
Sbjct: 298 EETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVDD 335
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 187 (70.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 60/220 (27%), Positives = 108/220 (49%)
Query: 136 SSCEVYVFDCAKQAEKQQDDCDPD-----LR--LKGHDKEGYGLSWSPFKEG-YLVSGSH 187
SS Y++ +Q + QQ + P L+ LKGH K + +SP +G +L S S
Sbjct: 9 SSSSSYLYQEQQQQQPQQTESIPQTPNYILKYTLKGHLKSISSVKFSP--DGKWLASASA 66
Query: 188 DNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT 247
D I +W A D + E H+ + D++W ++ L SA DD + IWD+ +
Sbjct: 67 DKTIKIWG----AYDGKFE--RTLEGHKEGISDIAWS-QDSKLICSASDDKTIKIWDVES 119
Query: 248 NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQ 307
+ + +K H++ V +SFNP + ++ + S D V ++D+ ++S+H++ V
Sbjct: 120 GKMVKTLKGHKEYVFGVSFNPQSN-LIVSGSFDENVRIWDVNTGECT-KMISAHSDPVTG 177
Query: 308 VEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
V ++ + T++ S + D + +WD G + EDG
Sbjct: 178 VHFNRDG-TLVVSGSYDGTVRIWDTTT-GQLLNTISTEDG 215
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 52/173 (30%), Positives = 87/173 (50%)
Query: 162 LKGHDKEGYG-LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVED 220
L+GH KEG ++WS + + S S D I +WDV + K++ + + H+ V
Sbjct: 84 LEGH-KEGISDIAWSQDSK-LICSASDDKTIKIWDVES---GKMVKTL---KGHKEYVFG 135
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
VS++ ++ NL S D + IWD+ T + + + AH V + FN V++ S D
Sbjct: 136 VSFNPQS-NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVS-GSYD 193
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
TV ++D + I + +EV V++ PN + VLA + D+ L +W N
Sbjct: 194 GTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNT-LRLWSYN 245
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGPPE-LLFSHGG 357
++ E GP +LF+ G
Sbjct: 224 VSC-IEGEPGPVRSVLFNPDG 243
Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGPPE-LLFSHGG 357
++ E GP +LF+ G
Sbjct: 224 VSC-IEGEPGPVRSVLFNPDG 243
Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGPPE-LLFSHGG 357
++ E GP +LF+ G
Sbjct: 224 VSC-IEGEPGPVRSVLFNPDG 243
Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 60/201 (29%), Positives = 97/201 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGPPE-LLFSHGG 357
++ E GP +LF+ G
Sbjct: 224 VSC-IEGEPGPVRSVLFNPDG 243
Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 196 (74.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 53/236 (22%), Positives = 119/236 (50%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P + ++++ H I L+D ++ + ++ HE V +++H+ + L
Sbjct: 14 GLSFHPTRP-WILASLHSGSIHLYDY------RIKTLLEKFDEHEGPVRGINFHM-TQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + +K H+ + + F+ W++++ S D + +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSS-SDDMVIRIWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDA--EDGP 348
T + L+ H V + P + V+++S D + + +WD++ + + + E+ P
Sbjct: 125 RTC-IAELNGHNHYVMSALFHPKDDLVVSASLD-QTIRIWDISGLKKKMTTVKPYRENDP 182
Query: 349 PEL---LF--------SHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
L LF S GH ++ S++ P+++S+ +DD+ V++W+M D I
Sbjct: 183 MRLQDELFGTDISVRLSLEGHDRGVNWASFHPTQPYIVSA-SDDHQVKLWRMNDPI 237
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 48/182 (26%), Positives = 88/182 (48%)
Query: 156 CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE 215
C + L GH + + W P K LVSG D + LWD + + + + H H+
Sbjct: 81 CQEERSLTGHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWDAKS---GRELRSFH---GHK 133
Query: 216 SVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLA 275
++V+ V W+ +N N +A D + ++D+R+ + + + H K+V L+++P++E
Sbjct: 134 NIVQCVKWN-QNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYFV 192
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S D + + + T + I ++H V+ + W P +L S +D W NR
Sbjct: 193 SGSYDGAIFHWLVGHETPQIEINNAHDNSVWDLAWHPVGY-LLCSGGNDHATRFWCRNRP 251
Query: 336 GD 337
GD
Sbjct: 252 GD 253
Score = 136 (52.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 62/238 (26%), Positives = 96/238 (40%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L+ HD+ + WS E ++V+G I W S + KV AH V D+
Sbjct: 3 LQAHDQAVRSMIWSN-NENWMVTGDDGGAIKYWQ-SNMNNVKVNKT-----AHRESVRDL 55
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
S+ + + F S DD + +WD Q ++ + H +V + ++P +L + D
Sbjct: 56 SF-CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKS-LLVSGGKDY 113
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSAD------DRRLMVWDLNRI 335
V L+D K L H V V+W+ N VL +S D D R M +L
Sbjct: 114 LVKLWDA-KSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMK-ELESF 171
Query: 336 GDEQLELDAEDGPP--ELLFSHGGHKAKISDFSW--NKNDPWVISSVADDNTVQVWQM 389
++ A P E F G + I F W P + + A DN+V W +
Sbjct: 172 RGHNKDVTALAWHPFHEEYFVSGSYDGAI--FHWLVGHETPQIEINNAHDNSV--WDL 225
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 64/238 (26%), Positives = 108/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP E YL S S D +W + E HE+ V+ VSW
Sbjct: 57 GHKRTIREVRWSPCGE-YLASASFDATTAIWSKH--------ECTATLEGHENEVKSVSW 107
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + AH ++V + ++P E VLA+AS D
Sbjct: 108 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE-VLASASYD 165
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG- 336
T+ +F + LSSHT V+ +++D + E L S +DD L +W G
Sbjct: 166 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGER-LVSCSDDATLKIWRAYHPGN 224
Query: 337 DEQLELDAEDGPPELLFSHGG-HKAKISDFSWNKNDPWVISSVADDNTVQVW-QMTDS 392
D + + + + + G H I D SW K + S+ DD ++++ + +DS
Sbjct: 225 DAGIATPDKTTVWKCVCTLSGEHSRAIYDVSWCKQTGLIASACGDDG-IRIFKECSDS 281
Score = 171 (65.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 49/182 (26%), Positives = 90/182 (49%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVKA--HEKEVNYLS 265
H + H+ + V+WH K N F S G+D + IW L N T + + + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDR 325
++P E+ LA+AS D T A++ + T L H EV V W + +LA+ + D+
Sbjct: 67 WSPCGEY-LASASFDATTAIWSKHECTATLE---GHENEVKSVSWSRSGG-LLATCSRDK 121
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
+ +W++ GD++ E A +L H + W+ V++S + DNT++
Sbjct: 122 SVWIWEV--AGDDEFECAA------VL---NAHSQDVKRVVWHPTKE-VLASASYDNTIK 169
Query: 386 VW 387
++
Sbjct: 170 MF 171
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/172 (27%), Positives = 84/172 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W +S K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNSFASCGEDKAIRIWSLSGNTWTTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
V W E L SA D IW ++ ++ HE EV +S++ + +LAT S D
Sbjct: 65 VRWSPCGEYL-ASASFDATTAIWS--KHECTATLEGHENEVKSVSWSR-SGGLLATCSRD 120
Query: 281 TTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+V ++++ +L++H+++V +V W P E VLAS++ D + ++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE-VLASASYDNTIKMF 171
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 68/280 (24%), Positives = 116/280 (41%)
Query: 136 SSCEVYV----FDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKI 191
S C Y+ FD A A + +C L +GH+ E +SWS G L + S D +
Sbjct: 68 SPCGEYLASASFD-ATTAIWSKHECTATL--EGHENEVKSVSWSR-SGGLLATCSRDKSV 123
Query: 192 CLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ 251
+W+V A D + V AH V+ V WH E L ++ D+ M + +
Sbjct: 124 WIWEV---AGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDW 180
Query: 252 Q---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF-------DMR-----KMTVPLH 296
+ +H V + F+ E L + S D T+ ++ D K TV
Sbjct: 181 DCTATLSSHTSTVWSIDFDADGER-LVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKC 239
Query: 297 I--LSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP-ELL 352
+ LS H+ ++ V W ++AS+ D + ++ D + D P ELL
Sbjct: 240 VCTLSGEHSRAIYDVSWC-KQTGLIASACGDDGIRIF--KECSDSK-----RDAPTFELL 291
Query: 353 FSH-GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
+ H+ ++ WN + S +DD T+++W++ +
Sbjct: 292 TAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 186 (70.5 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 62/238 (26%), Positives = 108/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDGTTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + H ++V + ++P E +LA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE-LLASASYD 169
Query: 281 TTVALFDMRKMTVP---LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F + + LSSHT V+ +++D E L S +DD L +W G+
Sbjct: 170 NTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGER-LVSCSDDTSLKIWQAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
+ D + + G H I D SW K + ++ DD +++++ T DS
Sbjct: 229 DAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDG-IRIFKETSDS 285
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVKA--HEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L N T + + + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A P H + W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAAVLNP---------HTQDVKRVVWHPTKE-LLASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/232 (23%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLNGNTWTTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+ HT++V +V W P E +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE-LLASASYDNTIKMF------ 175
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
E DA D + + + H + + ++ ++S +DD ++++WQ
Sbjct: 176 ---AE-DALDSDWDCVATLSSHTSTVWSIDFDATGERLVSC-SDDTSLKIWQ 222
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/259 (22%), Positives = 105/259 (40%)
Query: 151 KQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV 210
K + + + L+GH+ E +SWS G L + S D + +W+V A D + V
Sbjct: 88 KSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKSVWIWEV---AGDDEFECAAV 143
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLSFN 267
H V+ V WH E L ++ D+ M + + V +H V + F+
Sbjct: 144 LNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFD 203
Query: 268 PYNEWVLATASSDTTVALFDMR------------KMTV---PLHILSSHTEEVFQVEWDP 312
E L + S DT++ ++ K TV I H+ ++ V W
Sbjct: 204 ATGER-LVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWC- 261
Query: 313 NHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDP 372
++A++ D + ++ D + + E +L G H ++ WN
Sbjct: 262 KLTNLIATACGDDGIRIF--KETSDSKRD---EPTFEQLTAEEGAHDQDVNSVEWNPVVE 316
Query: 373 WVISSVADDNTVQVWQMTD 391
+ S +DD T++VW+MT+
Sbjct: 317 GQLISCSDDGTIKVWKMTE 335
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 188 (71.2 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 56/225 (24%), Positives = 115/225 (51%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV K++ +++ + H VV D+++
Sbjct: 129 IEWHRFRFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLVD-HTEVVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
+ SA D L +WDL+ + +V + H+ V +F+P + +L + + V L+
Sbjct: 183 SLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSS-MLCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
+M K T+ + L H +V ++ P+ +LA+++ D R+ +WD + G +E
Sbjct: 242 NMDKYTM-IRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWDPHT-GAILMEFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
PP +F+ G + + S++ +D ++S+ADD V+ W++ +
Sbjct: 299 PPPTPIFAGGANDRWVRSVSFS-HDGLHVASLADDKMVRFWRIDE 342
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 185 (70.2 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 58/195 (29%), Positives = 96/195 (49%)
Query: 203 KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ---QRVKAHEK 259
K+ID+M EA V +++WH N + + +D + IW TN Q ++ HEK
Sbjct: 13 KLIDSMQK-EAPYDKVWNLAWH-PNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEK 70
Query: 260 EVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL-HI--LSSHTEEVFQVEWDPNHET 316
V ++++P + LA AS D + ++++ K + H+ L HT EV V WD T
Sbjct: 71 TVRRVAWSPCGRF-LAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTG-T 128
Query: 317 VLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVIS 376
+LA+ + D+ + +W Q+E +D E L + GH I W+ N+ + S
Sbjct: 129 LLATCSRDKSIWIW--------QME---DDNDFECLSINSGHGQDIKCVLWHPNEELLAS 177
Query: 377 SVADDNTVQVWQMTD 391
S DD T++ W+ D
Sbjct: 178 SSYDD-TIKFWKDID 191
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/259 (22%), Positives = 106/259 (40%)
Query: 143 FDCAKQA-EKQQDDCDPD--LRLKGHDKEGYGLSWSPFKEGYLVSG-SHDNKICLWDVSA 198
FD + EK +D+ + L+GH E ++W G L++ S D I +W +
Sbjct: 89 FDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWD--STGTLLATCSRDKSIWIWQME- 145
Query: 199 LAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIW-DLRTN-QTQQRVKA 256
D + + + H ++ V WH NE L S+ D + W D+ + + +
Sbjct: 146 --DDNDFECLSINSGHGQDIKCVLWH-PNEELLASSSYDDTIKFWKDIDGDWECINTLTG 202
Query: 257 HEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVP-LHILSSHTEE---VFQVEWDP 312
HE + L+FN + L + D V + K ++I E ++ ++W
Sbjct: 203 HESSIWDLAFNKDGD-KLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSS 261
Query: 313 NHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDP 372
T++ SADD + EQ D D +L H + ++ WN
Sbjct: 262 LTNTIVTGSADDSIIFY--------EQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFK 313
Query: 373 WVISSVADDNTVQVWQMTD 391
+++S DD +++W++ D
Sbjct: 314 NILASCGDDGFIKIWELQD 332
Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 48/236 (20%), Positives = 108/236 (45%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHV--YEAHESVVE 219
L+GH+K ++WSP +L S D +W+ S +D+ ++ HV E H V+
Sbjct: 65 LEGHEKTVRRVAWSPCGR-FLAGASFDASTSIWEKS---KDE-LEFTHVSSLEGHTYEVK 119
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK---AHEKEVNYLSFNPYNEWVLAT 276
V+W L + D + IW + + + + H +++ + ++P NE +LA+
Sbjct: 120 SVAWD-STGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHP-NEELLAS 177
Query: 277 ASSDTTVALF-DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+S D T+ + D+ ++ L+ H ++ + ++ + + L S +D+ ++ W ++
Sbjct: 178 SSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDK-LVSCGEDKLVLFWKFDKE 236
Query: 336 GDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
++ + + F + + I W+ +++ ADD+ + Q +D
Sbjct: 237 NEKWINI--------FKFKNENSRP-IYSIDWSSLTNTIVTGSADDSIIFYEQESD 283
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 185 (70.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 62/238 (26%), Positives = 108/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
K+ L + D + IW++ + + + H ++V + ++P E +LA+AS D
Sbjct: 112 S-KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE-ILASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F + LSSHT V+ +++D + E L S +DD L +W G+
Sbjct: 170 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGER-LVSCSDDTTLKIWRAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW-QMTDS 392
+ D + + G H I D SW K + ++ DD ++++ + +DS
Sbjct: 229 DAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKESSDS 285
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/183 (24%), Positives = 85/183 (46%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N F S G+D + IW L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A P H + W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAAVLNP---------HTQDVKRVVWHPTKE-ILASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 158 (60.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 59/232 (25%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W +S + K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNTFASCGEDKAIRIWSLSGNSWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSK-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+ HT++V +V W P E +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE-ILASASYDNTIKMF------ 175
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+ LD++ L SH I DF D + S +DD T+++W+
Sbjct: 176 -AESALDSDWDCTATLSSHTSTVWSI-DFD---ADGERLVSCSDDTTLKIWR 222
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 66/281 (23%), Positives = 110/281 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSK-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQT 250
+ +W+V A D + V H V+ V WH E L ++ D+ M + +
Sbjct: 127 VWIWEV---AGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSD 183
Query: 251 QQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF-------DMR-----KMTVPL 295
+ +H V + F+ E L + S DTT+ ++ D K TV
Sbjct: 184 WDCTATLSSHTSTVWSIDFDADGER-LVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWK 242
Query: 296 HI--LSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP--E 350
+ LS H+ ++ V W + + DD RI E + D P +
Sbjct: 243 CVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGI-------RIFKESSD-SKRDEPTFEQ 294
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
+ H+ ++ WN + S +DD T+++W+M D
Sbjct: 295 VTAEESAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKMLD 335
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 185 (70.2 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 72/307 (23%), Positives = 138/307 (44%)
Query: 108 IAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQA-EKQQDDCDPDLRLKGHD 166
+AQ + DG R + + G +S FD +K+ + + + L+GHD
Sbjct: 50 VAQTVLTDGHTRTIRELAW--SCCGHYLASAS---FDTTVAVWDKKSGEFECNATLEGHD 104
Query: 167 KEGYGLSWSPFKEGYLVSG-SHDNKICLWDVS-ALAQDKVIDAMHVYEAHESVVEDVSWH 224
E ++WS + G L++ S D + +W++ A Q+ + + V H V+ V WH
Sbjct: 105 NEVKSVTWS--RSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWH 162
Query: 225 LKNENLFGSAGDDCQLMIW--DLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATASSD 280
E+L SA D + ++ DL ++ + + +++H V +SF+ + LA+ S D
Sbjct: 163 -PQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQR-LASCSED 220
Query: 281 TTVALFDM----RKMTVP----------LHILSS-HTEEVFQVEWDPNHETVLASSADDR 325
TTV ++ + +P + LS H+ V+ ++W +LA++ D
Sbjct: 221 TTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWC-KQTGLLATACGD- 278
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
D RI E + D + EL+ + H + +W+ P ++ + +DD ++
Sbjct: 279 -----DTVRIFREASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIK 333
Query: 386 VWQMTDS 392
+WQ D+
Sbjct: 334 LWQYVDA 340
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/195 (24%), Positives = 94/195 (48%)
Query: 205 IDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR-TNQ-TQQRV--KAHEKE 260
++ + H V +WH LF S G+D + +W+ T++ Q V H +
Sbjct: 4 LELLQTLTGHAGRVWSAAWH-PGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRT 62
Query: 261 VNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLA 319
+ L+++ + LA+AS DTTVA++D + + L H EV V W + +LA
Sbjct: 63 IRELAWSCCGHY-LASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGN-LLA 120
Query: 320 SSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVA 379
+ + D+ + +W+++ D++ E E + GH + W+ + +++S +
Sbjct: 121 TCSRDKSVWIWEIHHAPDQEDEY-------ECVAVLNGHTQDVKKVCWHPQED-LLASAS 172
Query: 380 DDNTVQVWQ--MTDS 392
DNT+++++ + DS
Sbjct: 173 YDNTIRMYRQDLADS 187
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 189 (71.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 57/191 (29%), Positives = 92/191 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ + + HT V VE+ PN E +LAS + DR + WDL +
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQV 223
Query: 338 EQLELDAEDGP 348
++ E GP
Sbjct: 224 VSC-IEGEPGP 233
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 188 (71.2 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 48/177 (27%), Positives = 89/177 (50%)
Query: 154 DDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
D +P ++GH ++W P +L + +D+ LWD+ Q++++ H E
Sbjct: 296 DSDEPIADIEGHSMRVARVTWHPSGR-FLGTTCYDHSWRLWDLEV--QEEIL---H-QEG 348
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H V D+ +H + +L G+ G D +WDLRT + ++ H KE+ ++F+P N +
Sbjct: 349 HSKGVHDLHFH-PDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSP-NGFH 406
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+AT S D ++D+R+ ++ + +H V V++ PN L + A D +W
Sbjct: 407 VATGSGDNACKVWDLRQRRC-IYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 166 (63.5 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 36 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 88
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 89 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 146
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 147 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 198
Score = 158 (60.7 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 50/167 (29%), Positives = 81/167 (48%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 57 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 107
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 165
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADD 324
+ D TV L+D+ + + HT V VE+ PN E +LAS + D
Sbjct: 166 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN-EYLLASGSSD 210
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
AH S V + + L + GDDC++ +W + + H V + N E
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 273 VLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++A + S + + ++D+ + L L H + +++ P E V AS + D + +WD+
Sbjct: 78 IVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDI 134
Query: 333 NRIG 336
R G
Sbjct: 135 RRKG 138
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 166 (63.5 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ LW ++ + I ++ H S VE V + E L + +
Sbjct: 40 LATGGDDCRVNLWSIN---KPNCIMSL---TGHTSPVESVRLNTPEE-LIVAGSQSGSIR 92
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY E+V A+ S DT + L+D+R+ H
Sbjct: 93 VWDLEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGCVFRY-RGH 150
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
++ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 151 SQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFH 202
Score = 144 (55.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 160 LRLKGHDK--EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
+ L GH E L+ +P E +V+GS I +WD+ A K++ + H++
Sbjct: 61 MSLTGHTSPVESVRLN-TP--EELIVAGSQSGSIRVWDLEAA---KILRTLM---GHKAN 111
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ + +H E S D + +WD+R R + H + V L F+P +W LA+A
Sbjct: 112 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASA 169
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPN 313
+ D TV L+D+ + + HT V VE+ PN
Sbjct: 170 ADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPN 204
Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 195 DVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV 254
D AQ + A+ AH S V + + L + GDDC++ +W + +
Sbjct: 4 DRDRCAQAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL 63
Query: 255 KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNH 314
H V + N E ++A + S + + ++D+ + L L H + +++ P
Sbjct: 64 TGHTSPVESVRLNTPEELIVAGSQSGS-IRVWDLEAAKI-LRTLMGHKANICSLDFHPYG 121
Query: 315 ETVLASSADDRRLMVWDLNRIG 336
E V AS + D + +WD+ R G
Sbjct: 122 EFV-ASGSQDTNIKLWDIRRKG 142
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 61/239 (25%), Positives = 111/239 (46%)
Query: 114 VDGEVNRARCMPQKPNLVGTKTSSCE----VYVFDCAKQAEKQQDDCDPDLRLKGHDKEG 169
++G N +C+ + G +SC ++++ ++ E+ + C L H ++
Sbjct: 85 LEGHENEVKCVNWSSS--GVYLASCSRDKSAWIWEFIEEDEEYE--CASVLT--DHSQDV 138
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ WSP KE LVS S+DN I ++ D + H HES V +S+H E
Sbjct: 139 KHVVWSP-KENALVSASYDNTIKIYK----EVDDDWECSHTLIGHESTVWSLSFHSSGE- 192
Query: 230 LFGSAGDDCQLMIWD-LRTNQTQQR-------VKAHEKEVNYLSFNPYNEWVLATASSDT 281
LF S GDD L IW L++ + + H + + + ++ N + ATA D
Sbjct: 193 LFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKI-ATACGDD 251
Query: 282 TVALFDMRKMTVPL--HIL-----SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
+ +F + ++T+ + +L +H +V V W P + +LAS +DD + +W ++
Sbjct: 252 AIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIWKVH 310
Score = 151 (58.2 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 63/293 (21%), Positives = 124/293 (42%)
Query: 110 QKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEG 169
+ I +G R + P G +SC C K+ D + L+GH+ E
Sbjct: 37 KSILTEGHTRTIRSVAWSP--CGNYLASCSFDATICIWS--KKDGDFECMATLEGHENEV 92
Query: 170 YGLSWSPFKEG-YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNE 228
++WS G YL S S D +W+ + +D+ + V H V+ V W K E
Sbjct: 93 KCVNWS--SSGVYLASCSRDKSAWIWEF--IEEDEEYECASVLTDHSQDVKHVVWSPK-E 147
Query: 229 NLFGSAGDDCQLMIW-DLRTN-QTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
N SA D + I+ ++ + + + HE V LSF+ E + + D + ++
Sbjct: 148 NALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSFHSSGE-LFVSCGDDKVLKIW 206
Query: 287 --------DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDE 338
D++ +++ I H ++ V+W + + + DD + ++ + RI
Sbjct: 207 KCLKSGPSDVKWISI-CTIAGYHNRPIYDVDWSKLNNKIATACGDDA-IRIFSIVRI--- 261
Query: 339 QLELDAEDGPPELLFS--HGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+ + +LLF + H ++ W+ +++S +DDN +++W++
Sbjct: 262 TISISN-----QLLFIAYYQAHNHDVNVVRWHPKVDNILASGSDDNCIKIWKV 309
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD ++ + +H Y H V V +H + +AG D +
Sbjct: 191 IVSASDDKTVKLWDKTSR------ECVHSYCEHGGFVTYVDFH-PSGTCVAAAGMDNTVK 243
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD+RT++ Q + H VN LSF+P + L TASSD+T+ + D+ + + L+ L H
Sbjct: 244 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNY-LVTASSDSTLKILDLMEGRL-LYTLHGH 301
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
V + E AS D ++MVW N + E+ PP L S G
Sbjct: 302 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDVIDYGEVLRVQRPPATLASSSG 356
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/173 (26%), Positives = 78/173 (45%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W V + + V+ AH + V
Sbjct: 87 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIW-VPNIKGEST-----VFRAHTATVR 138
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++ F +A DD + +W + + H V F+P ++ +AS
Sbjct: 139 SVHFCSDGQS-FVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASD 196
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D TV L+D +H H V V++ P+ T +A++ D + VWD+
Sbjct: 197 DKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSG-TCVAAAGMDNTVKVWDV 247
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 198 ALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAH 257
AL Q+ H ++ H V V + + L + D C LM+W ++ R H
Sbjct: 34 ALPQEDPSLERH-FKGHRDAVTCVDFSFNMKQLASGSMDSC-LMVWHMKPQSRAYRFTGH 91
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETV 317
+ V ++F+P +LA+ S D TV ++ + + + +HT V V + + ++
Sbjct: 92 KDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSF 149
Query: 318 LASSADDRRLMVWDLNR 334
+ +S DD+ + VW +R
Sbjct: 150 VTAS-DDKTIKVWSTHR 165
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 49/182 (26%), Positives = 91/182 (50%)
Query: 213 AHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEW 272
+H V ++W+ + N+ SA D ++ +WD+ T + ++ H KEV +++N Y
Sbjct: 231 SHTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPE 290
Query: 273 VLATASSDTTVALFDMRKMTVPLH--ILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
VL + S D TV L D R+ P H S +V + WDP+ E S +D + +
Sbjct: 291 VLLSGSFDQTVVLKDGRQ---PSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGF 347
Query: 331 DLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
D+ Q + A + P F+ GH + S+N + P ++++ + D TV++W ++
Sbjct: 348 DVR-----QASISASESNPS--FTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
Query: 391 DS 392
++
Sbjct: 401 NN 402
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW- 223
H + GL+W+ L S S D K+ +WDV A K+ E H V+ V+W
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDV-ATGTCKI-----TMEHHTKEVQAVAWN 285
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTV 283
H E L + D +++ D R + +V L+++P++E + D TV
Sbjct: 286 HYAPEVLLSGSFDQT-VVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTV 344
Query: 284 ALFDMRKMTV------PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
FD+R+ ++ P ++ H E V ++ + +LA+ + DR + +WDL+
Sbjct: 345 KGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/235 (23%), Positives = 115/235 (48%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P K ++++ H I LWD +ID ++ HE V V +H ++ L
Sbjct: 14 GLSFHP-KRPWILASLHSGVIQLWDYR---MGTLIDR---FDEHEGPVRGVHFH-NSQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + ++ + H + + F+ W+++ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVS-ASDDQTIRIWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI-------GDE----- 338
T + +L+ H V + P + V+++S D + + VWD+ + D+
Sbjct: 125 RTC-VSVLTGHNHYVMCASFHPKEDLVVSASLD-QTVRVWDIGALRKKTVSPADDIMRLT 182
Query: 339 QLELDAEDGPPELL-FSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
Q+ D G ++ + GH ++ +++ P ++S ADD V++W+M ++
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSG-ADDRQVKLWRMNET 236
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD ++ + +H Y H V V +H + +AG D +
Sbjct: 160 IVSASDDKTVKLWDKTSR------ECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTVK 212
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD RT++ Q + H VN LSF+P +++ TASSD+T+ + D+ + + L+ L H
Sbjct: 213 VWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYTLHGH 270
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
V + E AS D ++MVW N + ++ A PP+
Sbjct: 271 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDTVDYGDMKARRPPPQ 318
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 56 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVR 107
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + + L +A DD + +W + + H V F+P ++ +AS
Sbjct: 108 SVHF-CSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR-LIVSASD 165
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
D TV L+D +H H V V++ P+ T +A++ D + VWD
Sbjct: 166 DKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWD 215
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 32/124 (25%), Positives = 61/124 (49%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
++ H V V + L ++L S D LMIW ++ R H+ V ++F+P
Sbjct: 15 FKGHRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+LA+ S D TV ++ + + + +HT V V + + + +L +++DD+ + VW
Sbjct: 74 H-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQ-LLVTASDDKTVKVW 130
Query: 331 DLNR 334
+R
Sbjct: 131 STHR 134
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 149 AEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM 208
A Q+D + KGH + +S +L SGS D+ + +W + Q +
Sbjct: 2 AAHSQEDPSLERHFKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMKP--QSRA---- 54
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNP 268
+ + H+ V V++ + +L S D + IW +AH V + F
Sbjct: 55 YRFTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS 113
Query: 269 YNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLM 328
+ +L TAS D TV ++ + L L+ H V ++ P+ ++++S DD+ +
Sbjct: 114 DGQ-LLVTASDDKTVKVWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSAS-DDKTVK 170
Query: 329 VWD 331
+WD
Sbjct: 171 LWD 173
>TAIR|locus:2030387 [details] [associations]
symbol:AT1G20540 "AT1G20540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0080008 eggNOG:NOG314403 ProtClustDB:CLSN2682746
EMBL:AY093157 EMBL:BT000290 IPI:IPI00532337 RefSeq:NP_173478.2
UniGene:At.25733 UniGene:At.70424 ProteinModelPortal:Q8RWD8
SMR:Q8RWD8 STRING:Q8RWD8 PaxDb:Q8RWD8 PRIDE:Q8RWD8
EnsemblPlants:AT1G20540.1 GeneID:838642 KEGG:ath:AT1G20540
TAIR:At1g20540 InParanoid:Q8RWD8 OMA:GMDCEAR PhylomeDB:Q8RWD8
ArrayExpress:Q8RWD8 Genevestigator:Q8RWD8 Uniprot:Q8RWD8
Length = 351
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/220 (24%), Positives = 100/220 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENL 230
L W + L+S N I LW + + +V+ H + +W + N
Sbjct: 127 LWWPSGRCDKLISIDEQN-IFLWSLDCSKKSAEVLSKDSAGMLHS--LSGGAWDPHDVNA 183
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVK-AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
+ G+ + WDLRT + ++ AH + V+Y NP E +L TA ++ + ++D+R
Sbjct: 184 VAATGES-SVQFWDLRTMKKVNSIEHAHVRGVDY---NPKREHILVTAEDESGIHVWDLR 239
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG--DEQLELDAEDG 347
K VP+ L HT + V +P ++ ++ S+ D + +W + D+ E E
Sbjct: 240 KAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVEST 299
Query: 348 PPE---LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
LL S+ ++ + +W+ +PWV +S++ D V
Sbjct: 300 RQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYDGRV 339
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 57/235 (24%), Positives = 114/235 (48%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
LS+ P K +++S H+ I LW +ID ++ H+ V + +H K + LF
Sbjct: 5 LSFHP-KRPWILSSLHNGVIQLWTTGWCT---LIDK---FDEHDGPVRGIDFH-KQQPLF 56
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
S GDD ++ +W+ + + + H + F+ W+L+ AS D T+ +++ +
Sbjct: 57 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRVWNWQSR 115
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL-----ELDAED 346
T + +L+ H V ++ P+ + V+++S D + + VWD++ + + L E D
Sbjct: 116 TC-VCVLTGHNHYVMCAQFHPSEDLVVSASLD-QTVRVWDISGLRKKNLSPGAVESDVRG 173
Query: 347 -------GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + H GH ++ +++ P ++S ADD V++W+M +S
Sbjct: 174 ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNES 227
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/269 (22%), Positives = 120/269 (44%)
Query: 126 QKPNLVGTKTSSCEVY-VFDCAKQAE-KQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLV 183
Q+P+L+ T + ++ + D + E K D + G W+ + +
Sbjct: 96 QRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITS---FDWNEAEPRRIG 152
Query: 184 SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIW 243
+ S D +WD+ + +V+D + AH+ V D++W +F S +D + ++
Sbjct: 153 TSSIDTTCTIWDI----EREVVDTQLI--AHDKEVYDIAWG--GVGVFASVSEDGSVRVF 204
Query: 244 DLRTNQTQQRV-KAHEKEVNY--LSFNPYNEWVLATA-SSDTTVALFDMRKMTVPLHILS 299
DLR + + ++ E LS+N + +AT + + D+R +P+ L
Sbjct: 205 DLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQ 264
Query: 300 SHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG-PPELLFSHGGH 358
H V + W P+ + + S+ DD + ++WD++ +G E G P L ++ G
Sbjct: 265 RHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQH-----VEGGLDPILAYTAG-- 317
Query: 359 KAKISDFSWNKNDP-WVISSVADDNTVQV 386
A++ W+ + P WV ++A N +Q+
Sbjct: 318 -AEVEQLQWSSSQPDWV--AIAFSNKLQI 343
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 65/247 (26%), Positives = 116/247 (46%)
Query: 150 EKQQDDCDP---DLR-LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVI 205
E++ DD D +++ L+GH Y ++ G L+S S D+ + WD+ + + V+
Sbjct: 334 EEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASG-LLSCSEDSTVRYWDLKSFT-NTVL 391
Query: 206 DAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLS 265
H Y + V S + F +A D +W + H +V+ +
Sbjct: 392 YRGHAYPVWDVDVSPCSLY------FSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVK 445
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDR 325
F+P + ++ AT S+D TV L+ R+ + + + H V + + PN + LAS+ +D+
Sbjct: 446 FHPNSNYI-ATGSTDKTVRLWSTRQ-GASVRLFTGHRGPVLTLAFSPNGK-YLASAGEDQ 502
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
RL +WDL A G L GH IS S+++ D +++S + DNTV+
Sbjct: 503 RLKLWDL-----------ASGG---LFKDLRGHTDTISSLSFSQ-DSSLVASASMDNTVR 547
Query: 386 VWQMTDS 392
VW + ++
Sbjct: 548 VWDIRNA 554
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 189 (71.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/243 (22%), Positives = 103/243 (42%)
Query: 169 GYGLSWSP-FKEGY---LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
G W P E Y + + + + + +W+ + K ++ V+ H V ++WH
Sbjct: 69 GNDCCWHPSLLENYRFLIATAATNGAVVIWN-TVREGSKSVE--RVFTDHSRAVNKLAWH 125
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKE--VNYLSFNPYNEWVLATASSDTT 282
+ + + D L +WD+R + ++ K + + FNP A A + T
Sbjct: 126 PEKLDCILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGT 185
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLEL 342
+ L+D+RK T+ + ++SH V ++W P + ++AS DR + VWD + G +
Sbjct: 186 IQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSN-GKSLNNV 244
Query: 343 DAEDGPPELLFSHGG--HKAKIS---DFS---WNKNDPWV-ISSVADDNTVQ---VWQMT 390
+ + G H A S DF W+ P++ + S D V +W+
Sbjct: 245 STISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKKPYIPLFSFTDHRDVPTGLIWKSP 304
Query: 391 DSI 393
S+
Sbjct: 305 SSL 307
Score = 165 (63.1 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 43/208 (20%), Positives = 99/208 (47%)
Query: 130 LVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDN 189
L+ T ++ V +++ ++ K + D H + L+W P K +++GS DN
Sbjct: 85 LIATAATNGAVVIWNTVREGSKSVERVFTD-----HSRAVNKLAWHPEKLDCILTGSQDN 139
Query: 190 KICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ 249
+ +WD+ A I + + DV ++ N F +A D+ + +WD+R
Sbjct: 140 TLRMWDIRDSANASKI----TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPT 195
Query: 250 TQ-QRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQV 308
+++ +H+ V + ++P + ++A+ D + ++D L+ +S+ V ++
Sbjct: 196 IAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGK-SLNNVST-ISSVSRI 253
Query: 309 EWDPNHETVLASSAD--DRRLMVWDLNR 334
+W P ++ +AS + D ++ +WD+ +
Sbjct: 254 KWRPGNKWHIASCSSIVDFQIHIWDVKK 281
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 58/225 (25%), Positives = 115/225 (51%)
Query: 172 LSWSPFKEGY----LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
+ W F+ G L +G ++ +I +WDV K++ +++ + H +V D+++
Sbjct: 129 IEWHRFRFGQDQLLLATGLNNGRIKIWDVYT---GKLL--LNLVD-HIEMVRDLTFAPDG 182
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALF 286
L SA D L +WDL+ + +V +AH+ V +F+P +L + + V L+
Sbjct: 183 SLLLVSASRDKTLRVWDLKDDGNMVKVLRAHQNWVYSCAFSPDCS-MLCSVGASKAVFLW 241
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
+M K T+ + L H +V ++ P+ +LA+++ D R+ VWD + GD +E
Sbjct: 242 NMDKYTM-IRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYVWDPHN-GDLLMEFGHLF 298
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
P +F+ G + + S++ +D ++S+ADD V+ W++ +
Sbjct: 299 PSPTPIFAGGANDRWVRAVSFS-HDGLHVASLADDKMVRFWRIDE 342
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 169 (64.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 174 WSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS-WHLKNENLFG 232
W P +G V +N + LWD+ + I + E + W +
Sbjct: 142 WEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKFTAGKWSPHHNCTQL 201
Query: 233 SAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
+ +D + WDLR+ +Q AH + V L FNP ++ LA+ D V +D+R +
Sbjct: 202 ATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHI 261
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE--LDAED-GP 348
+ P+ L H+ V+ V ++ +H+ +L +++ D R+++ ++ I E +D +D
Sbjct: 262 SEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVILSNMVSISSEPFGHLVDDDDLSD 321
Query: 349 PE 350
PE
Sbjct: 322 PE 323
Score = 53 (23.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 11/60 (18%), Positives = 31/60 (51%)
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI-YR 395
++Q + E ++ ++ H+ + W+ DPW+ +S++ D + + ++ ++ YR
Sbjct: 325 NQQEDKGKEPLQDSIISTYEEHEDSVYAVEWSAADPWLFASLSYDGRLVINRVPRALKYR 384
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 178 (67.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 116 GEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWS 175
GEVN + P L+ C VYV+ K RL GH +S
Sbjct: 27 GEVNCSAFSPDGRTLLTASDDGC-VYVWG-TKSGRLLW-------RLAGHRGPVKSCCFS 77
Query: 176 PFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSA 234
P +G L+ S S D+ I LWDV A+ K +HV + H+ VE VS+ ++ L S
Sbjct: 78 P--DGRLIASSSSDHSIRLWDV---ARSK---CLHVLKGHQRSVETVSFSPDSKQL-ASG 128
Query: 235 GDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT-- 292
G D + ++W++++ + + H + F+P ++ LAT S D+TV ++D+R T
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSD-SLATGSWDSTVHIWDLRASTPV 187
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
V H L HT + + + + +LAS + D+ + VW
Sbjct: 188 VSYHNLEGHTGNISCLCYSASG--LLASGSWDKTICVW 223
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +S+SP + L SG D + +W+V + + +H+ H ++
Sbjct: 106 LKGHQRSVETVSFSPDSK-QLASGGWDKRAIVWEVQSGRR------VHLLVGHCDSIQSS 158
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQ---TQQRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ +++L + D + IWDLR + + ++ H ++ L ++ +LA+ S
Sbjct: 159 DFSPTSDSL-ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG--LLASGS 215
Query: 279 SDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
D T+ ++ +PL L HT V + + P+ E LAS+ R + VWD
Sbjct: 216 WDKTICVWKPTTNNLPLQ-LKGHTIWVNSLAFSPD-ELKLASAGYSRTVKVWD 266
Score = 131 (51.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 205 IDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYL 264
+ + Y H V ++ L ++ D C + +W ++ + R+ H V
Sbjct: 16 VGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGC-VYVWGTKSGRLLWRLAGHRGPVKSC 74
Query: 265 SFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADD 324
F+P ++A++SSD ++ L+D+ + LH+L H V V + P+ + LAS D
Sbjct: 75 CFSPDGR-LIASSSSDHSIRLWDVARSKC-LHVLKGHQRSVETVSFSPDSKQ-LASGGWD 131
Query: 325 RRLMVWDL 332
+R +VW++
Sbjct: 132 KRAIVWEV 139
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 35/161 (21%), Positives = 76/161 (47%)
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
L S+ D + +WD+ ++ +K H++ V +SF+P ++ LA+ D +++++
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQ 140
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP 349
+H+L H + + ++ P ++ LA+ + D + +WDL P
Sbjct: 141 SGR-RVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRA-----------STPV 187
Query: 350 ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
+ GH IS ++ + +++S + D T+ VW+ T
Sbjct: 188 VSYHNLEGHTGNISCLCYSASG--LLASGSWDKTICVWKPT 226
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 180 (68.4 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 63/238 (26%), Positives = 110/238 (46%)
Query: 161 RLKGHDKEGYGLSWSPFK---EGY---LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+L+GH + ++W+P +G L S S DN + +W+ S+L++ + + E H
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV-LEETH 73
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEW 272
V +W + L +A D IW ++ + ++ HE EV +S+N
Sbjct: 74 TRTVRSCAWSPSGQ-LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS- 131
Query: 273 VLATASSDTTVALFDMRKMTVP--LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
LAT S D +V ++++ + +L+ HT++V V+W P + VL S + D + VW
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMD-VLFSCSYDNTIKVW 190
Query: 331 DLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNK-NDPWVISSVADDNTVQVW 387
D+ E E S+ GH + + S+N D V S DD T+++W
Sbjct: 191 WSE---DDDGEYQCVQTLGE---SNNGHSSTVWSISFNAAGDKMVTCS--DDLTLKIW 240
Score = 162 (62.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 60/249 (24%), Positives = 110/249 (44%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L+GH+ E +SW+ L + S D + +W+V + D V H V+ V
Sbjct: 114 LEGHENEVKSVSWNA-SGSCLATCSRDKSVWIWEV---LEGNEYDCAAVLTGHTQDVKMV 169
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKA-------HEKEVNYLSFNPYNEWVL 274
WH + LF + D+ + W + Q V+ H V +SFN + +
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD-KM 228
Query: 275 ATASSDTTVALF--DMRKMT-----VP-LHI--LSS-HTEEVFQVEWDPNHETVLASSAD 323
T S D T+ ++ D+ KM P +H+ LS H ++ W + + ++AS A
Sbjct: 229 VTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHW--SRDDIIASGAG 286
Query: 324 DRRLMVWDLNRIGDEQLELDAEDGPPE--LLFSHGGHKAKISDFSWNKNDP-WVISSVAD 380
D + ++ + + D+ DGP LL + H+ ++ W+ + +++S +D
Sbjct: 287 DNAIRLF----VDSKH---DSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASD 339
Query: 381 DNTVQVWQM 389
D V++WQ+
Sbjct: 340 DGMVKIWQL 348
>UNIPROTKB|E1BJG3 [details] [associations]
symbol:LOC533444 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0017069 "snRNA binding" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016604
GO:GO:0017069 OMA:GQNHSRI GeneTree:ENSGT00620000088064
EMBL:DAAA02020720 EMBL:DAAA02020721 IPI:IPI00701405
Ensembl:ENSBTAT00000016037 Uniprot:E1BJG3
Length = 1513
Score = 115 (45.5 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 35/132 (26%), Positives = 58/132 (43%)
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHE 315
+ E++YL + N V+ + T + +T+ P LS HT ++ + W P+H+
Sbjct: 595 QPELSYLMASGSNNAVIYVHNLQTVIESNPQSPVTITEPYRTLSGHTAKITSLAWSPHHD 654
Query: 316 TVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVI 375
L S++ D VWD ++ P L + GH+ ++ W+ DP I
Sbjct: 655 GRLVSASYDGTAQVWDT-----------LQEEP---LCNFRGHRGRLLCVVWSPLDPDCI 700
Query: 376 SSVADDNTVQVW 387
S ADD V W
Sbjct: 701 YSGADDFCVYKW 712
Score = 107 (42.7 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y L++SP G L G D I +W+ ++ + D H ++ +S V + WH E
Sbjct: 383 YSLAFSPVDTGCLAIGVGDGMIRVWNTLSIKNN--YDVKHFWQGVKSKVTALCWHPTKEG 440
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKA-HEKEVNYLSFNP 268
DD ++ ++D +N+ Q H+K V L++ P
Sbjct: 441 CLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYSLAWGP 480
Score = 64 (27.6 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSP 176
C P +LV V + D +K+ E RL+GHD E + ++W P
Sbjct: 159 CSPHHEDLVAIGYKDGIVVIIDISKKGEVMH-------RLRGHDDEIHSIAWCP 205
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 183 (69.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 60/229 (26%), Positives = 108/229 (47%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
L+WSP +L S S D + ++D +A D V+ H ++ V+ WH + L
Sbjct: 161 LAWSPSDTKFL-SASDDTTLKIYDFTARTCDTVLTG-HNWD-----VKSCDWH-PTKGLL 212
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
S D Q+ WD RT + + +H+ V F+ N +LAT+S D T +FD+R M
Sbjct: 213 VSGSKDHQVKFWDPRTARCLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMM 272
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR--IGDEQLEL----DAE 345
+ IL H + + + W P H +++++ ++D L + L+ + Q+ D+
Sbjct: 273 R-DICILRGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLPAGQIPTVAPYDSP 331
Query: 346 DG---PPELLF-SHG---GHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
D P ++++ +H H A I W+ +++S + DN + W
Sbjct: 332 DPANTPAQVIYPAHRIQYAHAATIWTLDWHPLGH-ILASGSKDNFTRFW 379
Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 56/204 (27%), Positives = 90/204 (44%)
Query: 174 WSPFKEGY-LVSGSHDNKICLWDVSALAQDKVIDAMHV-Y------------EAHESVVE 219
W+P EG L++G H + LW+ +A + V+D V Y +AH V
Sbjct: 102 WTP--EGRRLLTGGHTGEFMLWNGTAFNFETVMDKGDVKYWRPNFNNVETIDDAHHDAVR 159
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
D++W ++ F SA DD L I+D + H +V ++P + +L + S
Sbjct: 160 DLAWS-PSDTKFLSASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHP-TKGLLVSGSK 217
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQ 339
D V +D R L L SH V ++ + +LA+S+ D+ V+DL + D
Sbjct: 218 DHQVKFWDPRTARC-LTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMRDIC 276
Query: 340 LELDAEDGPPELLFSHGGHKAKIS 363
+ L + P L H H + IS
Sbjct: 277 I-LRGHEKPISTLTWHPVHCSLIS 299
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 178 (67.7 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 126 QKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSG 185
+KP +KT S + +K A + + L GH K + +SP E +L S
Sbjct: 6 KKPETEASKTQSTPSSSNNQSKPAPVKPN-YTLKFTLAGHTKAVSSVKFSPNGE-WLASS 63
Query: 186 SHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL 245
S D I +W +K I H+ + DV+W + NL SA DD L IWD+
Sbjct: 64 SADKLIKIWGAYDGKFEKTISG------HKLGISDVAWS-SDSNLLVSASDDKTLKIWDV 116
Query: 246 RTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEV 305
+ + + +K H V +FNP + ++ + S D +V ++D+ K L L +H++ V
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPV 174
Query: 306 FQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP 349
V ++ + +++SS D +WD G L +D PP
Sbjct: 175 SAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKTLIDDDNPP 216
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 53/175 (30%), Positives = 84/175 (48%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD ++ + +H Y H V V +H + +AG D +
Sbjct: 160 IVSASDDKTVKLWDKTSR------ECIHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTVK 212
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD RT++ Q + H VN LSF+P +++ TASSD+T+ + D+ + + L+ L H
Sbjct: 213 VWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYTLHGH 270
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHG 356
V + E AS D ++MVW N + ++ A PP L S G
Sbjct: 271 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDIVDYGDMKARR-PPPLTSSSG 323
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/172 (25%), Positives = 76/172 (44%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 56 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVR 107
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++L +A DD + +W + + H V F+P ++ +AS
Sbjct: 108 SVHFCSDGQSLV-TASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR-LIVSASD 165
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
D TV L+D +H H V V++ P+ T +A++ D + VWD
Sbjct: 166 DKTVKLWDKTSREC-IHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWD 215
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 32/124 (25%), Positives = 61/124 (49%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
++ H V V + L ++L S D LMIW ++ R H+ V ++F+P
Sbjct: 15 FKGHRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+LA+ S D TV ++ + + + +HT V V + + ++++ +S DD+ + VW
Sbjct: 74 H-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS-DDKTVKVW 130
Query: 331 DLNR 334
+R
Sbjct: 131 STHR 134
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 180 (68.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD ++ + +H Y H V V +H + +AG D +
Sbjct: 160 IVSASDDKTVKLWDKTSR------ECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTVK 212
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD+RT++ Q + H VN LSF+P + L TASSD+T+ + D+ + + L+ L H
Sbjct: 213 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNY-LVTASSDSTLKILDLMEGRL-LYTLHGH 270
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
V + E AS D ++MVW N
Sbjct: 271 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSN 301
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/173 (25%), Positives = 77/173 (44%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 56 RFAGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWVPNVKGESTV------FRAHTATVR 107
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++ F +A DD + +W + + H V F+P ++ +AS
Sbjct: 108 SVHFCSDGQS-FVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASD 165
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D TV L+D +H H V V++ P+ T +A++ D + VWD+
Sbjct: 166 DKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSG-TCIAAAGMDNTVKVWDV 216
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 31/124 (25%), Positives = 60/124 (48%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
++ H V V + L + L + D C LM+W ++ R H+ V ++F+P
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSC-LMVWHMKPQTRAYRFAGHKDAVTCVNFSPSG 73
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+LA+ S D TV ++ + + + +HT V V + + ++ + +S DD+ + VW
Sbjct: 74 H-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS-DDKTVKVW 130
Query: 331 DLNR 334
+R
Sbjct: 131 STHR 134
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 185 (70.2 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 51/173 (29%), Positives = 81/173 (46%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
L L GH +++ EG + +G+ I LWD L + KV+ + H S
Sbjct: 53 LSLYGHSSGIDSVTFDA-SEGLVAAGAASGTIKLWD---LEEAKVVRTL---TGHRSNCV 105
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V++H E F S D L IWD+R K H + VN L F P W+++
Sbjct: 106 SVNFHPFGE-FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVS-GGE 163
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D V ++D+ + LH SH ++ +++ P HE +LA+ + D+ + WDL
Sbjct: 164 DNVVKVWDLTAGKL-LHEFKSHEGKIQSLDFHP-HEFLLATGSADKTVKFWDL 214
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 45/174 (25%), Positives = 84/174 (48%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
LV+G D+K+ LW A+ + I + +Y H S ++ V++ +E L + +
Sbjct: 32 LVTGGEDHKVNLW---AIGKPNAI--LSLY-GHSSGIDSVTFDA-SEGLVAAGAASGTIK 84
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H ++F+P+ E+ A+ S DT + ++D+RK +H H
Sbjct: 85 LWDLEEAKVVRTLTGHRSNCVSVNFHPFGEF-FASGSLDTNLKIWDIRKKGC-IHTYKGH 142
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
T V + + P+ ++ S +D + VWDL G E + +G + L H
Sbjct: 143 TRGVNVLRFTPDGRWIV-SGGEDNVVKVWDLTA-GKLLHEFKSHEGKIQSLDFH 194
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 15 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 67
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 68 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 125
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 126 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 182
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 183 LIDDDNPP 190
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 99 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 151
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 152 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 209
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 210 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 15 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 59
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 60 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 91
>UNIPROTKB|F1RQC8 [details] [associations]
symbol:GEMIN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017069 "snRNA binding" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016604
GO:GO:0017069 OMA:GQNHSRI GeneTree:ENSGT00620000088064
EMBL:CU633659 EMBL:CU856697 Ensembl:ENSSSCT00000018581
Uniprot:F1RQC8
Length = 1514
Score = 122 (48.0 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 35/132 (26%), Positives = 61/132 (46%)
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHE 315
+ E++YL + N V+ + T + +T+ P LS HT ++ ++ W P+H+
Sbjct: 593 QPELSYLMASGSNNAVIYVHNLQTVIESNPESPVTITEPYRTLSGHTAKITRLAWSPHHD 652
Query: 316 TVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVI 375
L S++ D VWD ++ P L++ GH+ ++ +W+ DP I
Sbjct: 653 GRLVSASYDGTAQVWDT-----------LQEEP---LYNFRGHRGRLLCVAWSPLDPDCI 698
Query: 376 SSVADDNTVQVW 387
S ADD V W
Sbjct: 699 YSGADDFCVYKW 710
Score = 100 (40.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y L++SP G L G D I +W+ ++ + D + ++ +S V + WH E
Sbjct: 383 YSLAFSPVDTGCLAIGVGDGMIRVWNTLSMKNN--YDVKNFWQGVKSKVTALCWHPTKEG 440
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKA-HEKEVNYLSFNP 268
DD ++ ++D +N+ Q H+K V L++ P
Sbjct: 441 CLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP 480
Score = 72 (30.4 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL- 230
L W P KEG L G+ D K+ L+D + +K Y H+ V ++W +
Sbjct: 432 LCWHPTKEGCLAFGTDDGKVGLYDTYS---NKPPQISSTY--HKKTVYTLAWGPPVPPMA 486
Query: 231 FGSAGDDCQLMIW 243
FG GD L ++
Sbjct: 487 FGGEGDRPSLTLY 499
Score = 61 (26.5 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSP 176
C P +LV V + D +K+ E RL+GHD E + ++W P
Sbjct: 159 CSPHHEDLVAIGYKDGIVVIIDISKKGEVIH-------RLRGHDDEIHSIAWCP 205
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 93
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 94 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 151
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 152 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 208
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 209 LIDDDNPP 216
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 93
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 94 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 151
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 152 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 208
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 209 LIDDDNPP 216
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 93
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 94 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 151
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 152 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 208
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 209 LIDDDNPP 216
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 93
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 94 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 151
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 152 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 208
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 209 LIDDDNPP 216
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 93
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + NL SA DD L IWD+ + + + +K H V +FNP + ++ + S D
Sbjct: 94 AWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 151
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+ K L L +H++ V V ++ + +++SS D +WD G
Sbjct: 152 SVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 208
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 209 LIDDDNPP 216
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH + +++P + +VSGS D + +WDV K + AH V V
Sbjct: 125 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV------KTGKCLKTLPAHSDPVSAV 177
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSD 280
++ ++ +L S+ D IWD + Q + + V+++ F+P +++LA A+ D
Sbjct: 178 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA-ATLD 235
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQV--EWDPNHETVLASSADDRRLMVWDL 332
T+ L+D K L + H E + + + + S ++D + +W+L
Sbjct: 236 NTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 85
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ +D ++ S +DD T+++W ++
Sbjct: 86 HKLGISDVAWS-SDSNLLVSASDDKTLKIWDVS 117
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 176 (67.0 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 64/262 (24%), Positives = 110/262 (41%)
Query: 115 DGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPD---LRLKGHDKEGYG 171
DG + A C P ++ T + + ++ C E + P + L+ H E Y
Sbjct: 71 DGLFDVAWC-PYAADIAATASGDGSLQIW-CGLDGESASNQLTPKQPLICLQEHKNEVYS 128
Query: 172 LSWSPFKEGY--LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
L W K Y L+SGS D + LWD + Q+ + + H ++ + N
Sbjct: 129 LDWGE-KWNYHTLLSGSWDCTLKLWDCNR--QNSIT----TFVGHNDLIYGAKFSPLIAN 181
Query: 230 LFGSAGDDCQLMIWDLR--TNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFD 287
LF S D L +W+ + ++AH E ++ ++ VL T SD + +D
Sbjct: 182 LFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWD 241
Query: 288 MRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
+RKM + L S V ++ P+ VLAS+ D +W+L R G+ E++A
Sbjct: 242 LRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLER-GESAQEVNARHT 300
Query: 348 PPELLFSHGGHKA-KISDFSWN 368
H+ +++D W+
Sbjct: 301 EFVCGLDWNPHRTHQLADCGWD 322
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 175 (66.7 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 53/203 (26%), Positives = 94/203 (46%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEG-YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHES 216
P + L+GH E Y +S +G +L S +D +I LW+V ++ V + H+
Sbjct: 28 PTMVLQGHGGEIYTSQFS--SDGSFLASAGYDQQIFLWNVFGECEN-----FAVLKGHKG 80
Query: 217 VVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLAT 276
+ +V ++ + +L SAG D + +WD+ T + K+H VN + N ++ +
Sbjct: 81 AIMEVKFNADSSHLV-SAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICS 139
Query: 277 ASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
AS D TV + DMR + + + V ++ + V+ D++ + VWD+ R
Sbjct: 140 ASDDGTVMVHDMRSKEAAKKFICKYQQTA--VTFNDAADNVICGGIDNQ-IKVWDMLR-N 195
Query: 337 DEQLELDAE-DGPPELLFSHGGH 358
D + L D L SH G+
Sbjct: 196 DVRYVLSGHRDTITSLSVSHNGN 218
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 64/227 (28%), Positives = 111/227 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
LKGH+ + +S + SGS+D + +W+ + H +E HE V V
Sbjct: 343 LKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETTTGL------LRHTFEDHEDSVMAV 395
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
S+ + L SA D + IWD RT Q ++ H+ VN +SF+P + +LA+AS D
Sbjct: 396 SFAHDSRRL-ASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSR-LLASASDDR 453
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET-VLASSADDRRLMVWDLNRIGDEQL 340
TV ++ ++ L H + V V + +H++ ++AS++DD + +WD + Q
Sbjct: 454 TVKIWHAATGSLQ-RTLEGHNDWVRSVVF--SHDSRLIASASDDMTVKIWDTATV-PLQN 509
Query: 341 ELDAEDG-PPELLFSHGGHK-AKISDFSWNKNDPWVISSVADDNTVQ 385
L++ D ++FSH A SD K W ++ + +NT++
Sbjct: 510 NLESHDNWVRSVVFSHDSRLLASASDDMTVKI--WDTATGSLENTLE 554
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVED 220
+ KGHD+ +S+S L S S D + +WD + + E H V+
Sbjct: 258 QFKGHDRAVGSVSFS-HDSRLLASASGDGTVKIWDTATSFLQNTL------EGHNEWVKS 310
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
V + + L SA DD + IWD T Q+ +K H V + F+ ++ ++A+ S+D
Sbjct: 311 VVFS-HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRLIASGSND 368
Query: 281 TTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQL 340
TV +++ + H H + V V + + LAS++D + +WD R G Q
Sbjct: 369 RTVRIWETTTGLLR-HTFEDHEDSVMAVSFAHDSRR-LASASDGGNVKIWD-TRTGSLQN 425
Query: 341 ELDAED 346
L+ D
Sbjct: 426 VLEGHD 431
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L+GH+ + +S + S S D + +WD + + + E+H++ V V
Sbjct: 469 LEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTAT------VPLQNNLESHDNWVRSV 521
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+ + L SA DD + IWD T + ++ H+ VN +SF+P + +LA+AS D
Sbjct: 522 VFS-HDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSR-LLASASDDG 579
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
TV ++ TV H + + + +LAS+ DD + +WD+
Sbjct: 580 TVKIWYAATGTVQ-HTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIWDM 628
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 177 (67.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 52/175 (29%), Positives = 83/175 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D + LWD ++ + +H Y H V V +H + +A D +
Sbjct: 160 IVSASDDKTVKLWDKTSR------ECVHSYCEHGGFVTYVDFH-PSGTCIAAASMDNTVK 212
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WD+RT++ Q + H VN LSF+P ++L TASSD+T+ + D+ + + L+ L H
Sbjct: 213 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL-TASSDSTLKILDLMEGRL-LYTLHGH 270
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHG 356
V + E AS D ++MVW N + E+ PP L + G
Sbjct: 271 QGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPAPLATSG 324
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 161 RLKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R GH +++SP G+L+ SGS D + +W + + V + AH + V
Sbjct: 56 RFAGHKDAVTCVNFSP--SGHLLASGSRDKTVRIWIPNVKGESTV------FRAHTATVR 107
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V + ++L +A DD + +W + + H V F+P ++ +AS
Sbjct: 108 SVHFCSDGQSLV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGR-LIVSASD 165
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D TV L+D +H H V V++ P+ T +A+++ D + VWD+
Sbjct: 166 DKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSG-TCIAAASMDNTVKVWDV 216
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
++ H + V + L + L + D C LM+W ++ R H+ V ++F+P
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSC-LMVWHMKPQSRAYRFAGHKDAVTCVNFSPSG 73
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+LA+ S D TV ++ + + + +HT V V + + ++++ +S DD+ + VW
Sbjct: 74 H-LLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS-DDKTVKVW 130
Query: 331 DLNR 334
+R
Sbjct: 131 STHR 134
>TAIR|locus:2014629 [details] [associations]
symbol:DWA2 "AT1G76260" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006281 "DNA repair"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0042732 "D-xylose metabolic
process" evidence=RCA] [GO:0048608 "reproductive structure
development" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009738
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567
GO:GO:0009788 EMBL:AC009978 EMBL:AC012394 GO:GO:0080008
EMBL:BT010880 EMBL:AK176410 EMBL:AK175439 EMBL:AK176650
IPI:IPI00524532 RefSeq:NP_177753.1 UniGene:At.24286
UniGene:At.48378 ProteinModelPortal:Q6NPN9 SMR:Q6NPN9 STRING:Q6NPN9
PaxDb:Q6NPN9 PRIDE:Q6NPN9 DNASU:843959 EnsemblPlants:AT1G76260.1
GeneID:843959 KEGG:ath:AT1G76260 GeneFarm:3013 TAIR:At1g76260
eggNOG:NOG314403 HOGENOM:HOG000264967 InParanoid:Q6NPN9 OMA:ACVAWEP
PhylomeDB:Q6NPN9 ProtClustDB:CLSN2682746 Genevestigator:Q6NPN9
Uniprot:Q6NPN9
Length = 350
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/221 (22%), Positives = 100/221 (45%)
Query: 174 WSPF-KEGYLVSGSHDNKICLWDV-SALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
W P L+S N + W + S+ +V+ H + +W+ + N
Sbjct: 128 WCPSGNSDKLISMDEQNLV-FWSLDSSKKSAEVLSKESAGMRHS--LSGGAWNPHDVNSV 184
Query: 232 GSAGDDCQLMIWDLRTNQTQQRV-KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
+A + + WDLRT + + +AH + V+Y N E +L +A ++ + L+D+RK
Sbjct: 185 -AATSESSIQFWDLRTMKKNNSIERAHVRNVDY---NLKREHILVSADDESGIHLWDLRK 240
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW-----DLNRIGDEQLELDAE 345
P+ L HT + V +P +E ++ S D + +W ++ + +E +
Sbjct: 241 TKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKTSESPVEASRQ 300
Query: 346 DGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQV 386
P LL S+ ++ + +W+ +PW+ +S++ D V +
Sbjct: 301 RVNP-LLNSYTDYEDSVYGLAWSSREPWIFASLSYDGRVVI 340
>TAIR|locus:2087433 [details] [associations]
symbol:AT3G63460 "AT3G63460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000230582 KO:K14005
InterPro:IPR009917 Pfam:PF07304 OMA:NQPPPMM EMBL:AY099702
EMBL:BT008435 IPI:IPI00547111 RefSeq:NP_851024.1 UniGene:At.22771
UniGene:At.67091 ProteinModelPortal:Q8L611 SMR:Q8L611 IntAct:Q8L611
STRING:Q8L611 PRIDE:Q8L611 ProMEX:Q8L611 EnsemblPlants:AT3G63460.1
GeneID:825521 KEGG:ath:AT3G63460 TAIR:At3g63460 InParanoid:Q8L611
PhylomeDB:Q8L611 ProtClustDB:CLSN2680494 ArrayExpress:Q8L611
Genevestigator:Q8L611 Uniprot:Q8L611
Length = 1104
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/168 (26%), Positives = 77/168 (45%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVY-EAHESVVEDVSWHLKNEN 229
GL ++ L SG+ D +IC+WD+ ++ + A + + +SW+ K +
Sbjct: 127 GLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQ 186
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQR-VKAHEKEVNYLSFNPYNEWVLATASSDT---TVAL 285
+ S + +IWDLR + + + + L +NP + AS D T+ L
Sbjct: 187 ILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKL 246
Query: 286 FDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
+DMR + P+ + H V +EW P+ + L + A D R + WD N
Sbjct: 247 WDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTN 294
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 65/258 (25%), Positives = 114/258 (44%)
Query: 153 QDDCDPDLRLKGH--DKEGYG-LSWS-------PFKEGYLVSGSHDNKICLWD-VSALAQ 201
Q D D DL L G E + L+W F G + G D I LW+ +S +
Sbjct: 49 QSD-DRDLPLVGEIPSSERFNRLAWGRNGSGSEEFALGLIAGGLVDGNIDLWNPLSLIGS 107
Query: 202 DKVIDAM--HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDL-RTNQTQQ--RVK- 255
+A+ H+ H+ V + ++ + NL S DD ++ IWDL + ++ +K
Sbjct: 108 QPSENALVGHL-SVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKG 166
Query: 256 ---AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP 312
A + E++++S+N + +LA+ S + T ++D+RK ++ S ++W+P
Sbjct: 167 SGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNP 226
Query: 313 NHET-VLASSADDRR--LMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNK 369
N T ++ +S DD L +WD+ I E F+ GH+ + W
Sbjct: 227 NVTTQIMVASDDDSSPTLKLWDMRNIMSPVRE-----------FT--GHQRGVIAMEWCP 273
Query: 370 NDPWVISSVADDNTVQVW 387
+D + + A DN W
Sbjct: 274 SDSSYLLTCAKDNRTICW 291
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 56/240 (23%), Positives = 119/240 (49%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
G+++ P + LVS H + I LWD +ID +E H+ V + +H + L
Sbjct: 14 GIAFHPKRPWILVS-LHSSTIQLWDYR---MGTLIDR---FEEHDGPVRGIDFH-PTQPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ +T + + H V + F+P W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILS-ASDDQTIRIWNWQN 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQ---LELDAED- 346
++ + ++ H V ++ P E ++AS++ D+ + +WD++ + + + ED
Sbjct: 125 RSL-ICTMTGHNHYVMCAQFHPT-EDLIASASLDQSVRIWDISGLRKKHSAPTTMSFEDQ 182
Query: 347 ------------GPPELL--FSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
G + + F GH ++ +++ + P ++S+ DD +++W+M+D+
Sbjct: 183 MARANNAQADMFGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSA-GDDRLIKLWRMSDT 241
>FB|FBgn0001086 [details] [associations]
symbol:fzy "fizzy" species:7227 "Drosophila melanogaster"
[GO:0008054 "cyclin catabolic process" evidence=IMP;IDA]
[GO:0005813 "centrosome" evidence=IDA;TAS] [GO:0005819 "spindle"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA;TAS] [GO:0007096 "regulation
of exit from mitosis" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030162 "regulation of proteolysis" evidence=TAS]
[GO:0007049 "cell cycle" evidence=IMP] [GO:0009987 "cellular
process" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS;IDA] [GO:0005680 "anaphase-promoting complex"
evidence=ISS;IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0007147 "female meiosis II" evidence=IMP]
[GO:0007144 "female meiosis I" evidence=IGI] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISS]
[GO:0007067 "mitosis" evidence=IMP] [GO:0030718 "germ-line stem
cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 GO:GO:0006911
GO:GO:0000776 GO:GO:0007067 EMBL:AE014134 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030162 GO:GO:0008054
GO:GO:0007096 GO:GO:0030718 KO:K03363 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 GO:GO:0007144 GO:GO:0007147
EMBL:U22419 EMBL:BT029432 EMBL:BT056243 RefSeq:NP_477501.1
UniGene:Dm.4066 SMR:Q24044 MINT:MINT-922907 STRING:Q24044
EnsemblMetazoa:FBtr0080833 GeneID:34968 KEGG:dme:Dmel_CG4274
UCSC:CG4274-RA CTD:34968 FlyBase:FBgn0001086 InParanoid:Q24044
OrthoDB:EOG4W3R3B GenomeRNAi:34968 NextBio:791144 Uniprot:Q24044
Length = 526
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/174 (26%), Positives = 81/174 (46%)
Query: 162 LKGHDKEGYGLSWSP-FKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVED 220
L GH +E GL WS FK YL SG +DN + +W ++ D +H + H++ V
Sbjct: 330 LSGHTQEVCGLKWSTDFK--YLASGGNDNLVNVWSAASGGVGTATDPLHKFNDHQAAVRA 387
Query: 221 VSWHLKNENLFGSAG---DDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
++W + S G D C + W++ + V + + + L Y E + A
Sbjct: 388 LAWCPWQPSTLASGGGTADRC-IKFWNVNNGTLMKSVDSKSQVCSLLFSRHYKELISAHG 446
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
++ + ++ M V L+ HT V Q+ P+ TV+++ AD+ L +W+
Sbjct: 447 FANNQLTIWKYPTM-VKQADLTGHTSRVLQMAMSPDGSTVISAGADET-LRLWN 498
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 55/232 (23%), Positives = 100/232 (43%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y L+ + +V+ + + + LW+ AQ I+ + +E + +SW ++
Sbjct: 211 YYLNLMDWSADNIVAVALGSCVYLWN----AQTGNIEQLTEFEEGD-YAGSLSW-IQEGQ 264
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
+ + +WD + + + H V L++N + ++++ S D T+ D+R
Sbjct: 265 ILAIGNSTGAVELWDCSKVKRLRVMDGHSARVGSLAWNSF---LVSSGSRDGTIVHHDVR 321
Query: 290 KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD------------LNRIGD 337
L LS HT+EV ++W + + LAS +D + VW L++ D
Sbjct: 322 AREHKLSTLSGHTQEVCGLKWSTDFK-YLASGGNDNLVNVWSAASGGVGTATDPLHKFND 380
Query: 338 EQLELDAEDG-P--PELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQV 386
Q + A P P L S GG + F WN N+ ++ SV D+ QV
Sbjct: 381 HQAAVRALAWCPWQPSTLASGGGTADRCIKF-WNVNNGTLMKSV--DSKSQV 429
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 67/274 (24%), Positives = 123/274 (44%)
Query: 120 RARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLR-LKGHDKEGYGLSWSPFK 178
R++ + +P+LV + D + E++ D +++ L+GH Y +
Sbjct: 298 RSKKLKSEPHLVDVSRIRLACDILD---EEEEEDDSAGTEMKILRGHCGPVYSTRFLSDS 354
Query: 179 EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDC 238
G L+S S D I WD+ + + V+ H Y + + S + F SA D
Sbjct: 355 SG-LLSCSEDMSIRYWDLRSFT-NTVLYQGHAYPVWDLDISPCSLY------FASASHDR 406
Query: 239 QLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
+W + H +V+ + F+P + + LAT S+D TV L+ ++ + +
Sbjct: 407 TARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGN-SVRLF 464
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
+ H V + + PN + LAS+ +D+RL +WDL G EL GH
Sbjct: 465 TGHRGPVLALAFSPNGK-YLASAGEDQRLKLWDLAS-GTLYKELR-------------GH 509
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
I+ +++ D +I+S + DN+V+VW + ++
Sbjct: 510 TDNITSLTFSP-DSSLIASASMDNSVRVWDIRNT 542
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 60/216 (27%), Positives = 103/216 (47%)
Query: 160 LRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
+ L GH L S KE +V+GS I +WD+ A K++ + H++ +
Sbjct: 57 MSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAA---KILRTLL---GHKANIC 109
Query: 220 DVSWHLKNENLFGSAGD-DCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ +H F ++G D + +WD+R + K+H + V L F+P +W LA+A+
Sbjct: 110 SLDFHPYGS--FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASAA 166
Query: 279 SDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDE 338
D TV L+D+ V + H+ V VE+ P+ E +LAS + DR + WDL +
Sbjct: 167 DDHTVKLWDLTAGKVMFEF-TGHSGPVNVVEFHPS-EYLLASGSSDRTIRFWDLEKFHVV 224
Query: 339 QLELDAEDGPPE-LLFS------HGGHKAKISDFSW 367
++ E P +LF+ +GG + + + W
Sbjct: 225 SC-IEEEATPVRCILFNPDGCCLYGGFQDSLRVYGW 259
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 59/206 (28%), Positives = 96/206 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L+GH+ +S+S L S S D + +WD + H E H +V V
Sbjct: 292 LEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGS------LQHTLEGHSDLVRSV 344
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+ + L SA D + IWD T Q ++ H V + F+ ++ +LA+AS D+
Sbjct: 345 IFS-HDSRLLASASDST-VKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDS 401
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET-VLASSADDRRLMVWDLNRIGDEQL 340
TV ++D ++ H L H + V V + +H++ +LAS++DD + +WD G Q
Sbjct: 402 TVKIWDTGTGSLQ-HTLEGHRDWVRSVIF--SHDSQLLASASDDSTVKIWDTGT-GSLQH 457
Query: 341 ELDAE-DGPPELLFSHGGHK-AKISD 364
L+ D ++FSH A SD
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASD 483
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 53/196 (27%), Positives = 94/196 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L+GH + +S + L++ + D+ + +WD + H E H V V
Sbjct: 334 LEGHSDLVRSVIFS--HDSRLLASASDSTVKIWDTGTGS------LQHTLEGHRDWVRSV 385
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+ + L SA DD + IWD T Q ++ H V + F+ ++ +LA+AS D+
Sbjct: 386 IFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDS 443
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET-VLASSADDRRLMVWDLNRIGDEQL 340
TV ++D ++ H L H + V V + +H++ +LAS++DDR + +WD + G +
Sbjct: 444 TVKIWDTGTGSLQ-HTLEGHRDWVRSVIF--SHDSRLLASASDDRTVRIWDTEK-GSHKH 499
Query: 341 ELDAEDG-PPELLFSH 355
L+ + FSH
Sbjct: 500 TLEGHSSLVTSVSFSH 515
Score = 162 (62.1 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 51/162 (31%), Positives = 82/162 (50%)
Query: 208 MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFN 267
+ E HE+ V VS+ + L SA DD + IWD T Q ++ H V + F+
Sbjct: 289 LQALEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 268 PYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET-VLASSADDRR 326
++ +LA+AS D+TV ++D ++ H L H + V V + +H++ +LAS++DD
Sbjct: 348 -HDSRLLASAS-DSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIF--SHDSQLLASASDDST 402
Query: 327 LMVWDLNRIGDEQLELDAE-DGPPELLFSHGGHK-AKISDFS 366
+ +WD G Q L+ D ++FSH A SD S
Sbjct: 403 VKIWDTGT-GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 443
Score = 118 (46.6 bits), Expect = 0.00068, P = 0.00068
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L S S D+ + +WD + H E H V V + + L SA DD +
Sbjct: 436 LASASDDSTVKIWDTGTGS------LQHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVR 488
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
IWD + ++ H V +SF+ ++ +LA+AS+D TV ++D+
Sbjct: 489 IWDTEKGSHKHTLEGHSSLVTSVSFS-HDSRLLASASNDQTVRIWDI 534
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 60/238 (25%), Positives = 109/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP E YL S S D +W + E HE+ V+ VSW
Sbjct: 57 GHKRTIREVRWSPCGE-YLASASFDATTAIWSKH--------ECNATLEGHENEVKSVSW 107
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + AH ++V + ++P E +LA+AS D
Sbjct: 108 S-QSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE-ILASASYD 165
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ ++ + LSSHT V+ ++++ + E L S +DD L +W G+
Sbjct: 166 NTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEADGER-LVSCSDDTTLKIWRAYHPGN 224
Query: 338 EQ-LELDAEDGPPELLFSHGG-HKAKISDFSWNKNDPWVISSVADDNTVQVW-QMTDS 392
E + + + + + G H + D SW K + S+ DD ++++ + +DS
Sbjct: 225 EAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASACGDDG-IRIFKESSDS 281
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 61/230 (26%), Positives = 108/230 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W S K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNSFASCGEDKAIRIWSQSGNTWTTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
V W E L SA D IW ++ ++ HE EV +S++ + +LAT S D
Sbjct: 65 VRWSPCGEYL-ASASFDATTAIWS--KHECNATLEGHENEVKSVSWSQ-SGGLLATCSRD 120
Query: 281 TTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDE 338
+V ++++ +L++HT++V +V W P+ E +LAS++ D + ++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE-ILASASYDNTIKMY-------A 172
Query: 339 QLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+ LD++ L SH I DF + D + S +DD T+++W+
Sbjct: 173 ESALDSDWDCTATLSSHTSTVWSI-DF---EADGERLVSCSDDTTLKIWR 218
Score = 161 (61.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 46/182 (25%), Positives = 89/182 (48%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVKA--HEKEVNYLS 265
H + H+ + V+WH K N F S G+D + IW N T + + + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDR 325
++P E+ LA+AS D T A++ + L H EV V W + +LA+ + D+
Sbjct: 67 WSPCGEY-LASASFDATTAIWSKHECNATLE---GHENEVKSVSWSQSGG-LLATCSRDK 121
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
+ +W++ GD++ E A +L H + W+ + +++S + DNT++
Sbjct: 122 SVWIWEV--AGDDEFECAA------VL---NAHTQDVKRVVWHPSKE-ILASASYDNTIK 169
Query: 386 VW 387
++
Sbjct: 170 MY 171
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 68/279 (24%), Positives = 114/279 (40%)
Query: 136 SSCEVYV----FDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKI 191
S C Y+ FD A A + +C+ L +GH+ E +SWS G L + S D +
Sbjct: 68 SPCGEYLASASFD-ATTAIWSKHECNATL--EGHENEVKSVSWSQ-SGGLLATCSRDKSV 123
Query: 192 CLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ 251
+W+V A D + V AH V+ V WH E L ++ D+ M + +
Sbjct: 124 WIWEV---AGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDW 180
Query: 252 Q---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR------------KMTV--- 293
+ +H V + F E L + S DTT+ ++ K TV
Sbjct: 181 DCTATLSSHTSTVWSIDFEADGER-LVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKC 239
Query: 294 PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLF 353
+ H+ V+ V W ++AS+ D D RI E + ++ ELL
Sbjct: 240 VCTVAGQHSRAVYDVSWC-KLTGLIASACGD------DGIRIFKESSDSKRDEPTFELLT 292
Query: 354 SH-GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
+ H+ ++ WN + S +DD T+++W++ +
Sbjct: 293 AEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 44/173 (25%), Positives = 86/173 (49%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 279 FALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNT 329
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M+
Sbjct: 330 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMK 388
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
+ T +H L +H++E++ ++W +PN +LAS++ D + +WD++R
Sbjct: 389 QDTC-VHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDR 440
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF---- 266
++ H + V + W + L S DD L IW ++ + ++AH KE+ + +
Sbjct: 354 FQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 412
Query: 267 ----NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
NP + +LA+AS D+TV L+D+ + V +H L+ H E V+ V + P+ + LAS +
Sbjct: 413 PGTSNPNSNIMLASASFDSTVRLWDVDR-GVCIHTLTKHQEPVYSVAFSPDGK-YLASGS 470
Query: 323 DDRRLMVWD 331
D+ + +W+
Sbjct: 471 FDKCVHIWN 479
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 58/235 (24%), Positives = 104/235 (44%)
Query: 160 LRLKGHD----KEGYGLSWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+R GHD K+ L W+ +G L++ GS+D +W +D + + H
Sbjct: 224 IREGGHDVPSNKDVTSLDWN--SDGTLLATGSYDGFARIW-----TEDGNLAS--TLGQH 274
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVL 274
+ + + W+ K N SAG D +IWD T + +Q+ H L + N
Sbjct: 275 KGPIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNTTF 331
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
A+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W + +
Sbjct: 332 ASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQ 389
Query: 335 IGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D + D + E+ + N N +++S + D+TV++W +
Sbjct: 390 --DTCVH-DLQAHSKEIYTIKWSPTGPGTS---NPNSNIMLASASFDSTVRLWDV 438
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 52/236 (22%), Positives = 98/236 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 174 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ + L + D IW N + H+ + L +N ++
Sbjct: 233 SNKDVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNKKGNYI 290
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N T AS + D + V
Sbjct: 291 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQNN--TTFASCSTDMCIHVC--- 343
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
R+G ++ P F GH +++ W+ + +++S +DD T+++W M
Sbjct: 344 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSM 387
>MGI|MGI:1289332 [details] [associations]
symbol:Tssc1 "tumor suppressing subtransferable candidate 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1289332 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
eggNOG:NOG314403 HOGENOM:HOG000264967 OMA:ACVAWEP EMBL:AC136986
CTD:7260 HOVERGEN:HBG052937 OrthoDB:EOG4C5CJP EMBL:CT010449
EMBL:BC031458 IPI:IPI00321310 RefSeq:NP_958745.2 UniGene:Mm.273724
ProteinModelPortal:Q8K0G5 SMR:Q8K0G5 STRING:Q8K0G5
PhosphoSite:Q8K0G5 PaxDb:Q8K0G5 PRIDE:Q8K0G5
Ensembl:ENSMUST00000035657 GeneID:380752 KEGG:mmu:380752
UCSC:uc007ngb.2 InParanoid:Q8K0G5 NextBio:401194 Bgee:Q8K0G5
CleanEx:MM_TSSC1 Genevestigator:Q8K0G5
GermOnline:ENSMUSG00000036613 Uniprot:Q8K0G5
Length = 386
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 174 WSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS-WHLKNENLFG 232
W P +G V D+ I LWD+ + V+ + E + W +
Sbjct: 142 WEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKFTAGRWSPHHNCTQV 201
Query: 233 SAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKM 291
+ D L WD R+ +Q AH + V L FNP ++ LA+ D V +D R +
Sbjct: 202 ATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNV 261
Query: 292 TVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPEL 351
T P+ L H+ V+ V ++ +H+ ++ + + D R+++ ++ I E +DG
Sbjct: 262 TEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDGDISD 321
Query: 352 LFSHGGHKAK 361
H K+K
Sbjct: 322 PEEHHAEKSK 331
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 45/173 (26%), Positives = 83/173 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 333 FALKWNR-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNT 383
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M
Sbjct: 384 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM- 441
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
K V +H L +H +E++ ++W +PN +LAS++ D + +WD+ R
Sbjct: 442 KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIER 494
Score = 154 (59.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 57/234 (24%), Positives = 100/234 (42%)
Query: 160 LRLKGHD----KEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHE 215
+R GHD K+ L W+ L +GS+D +W +D + + H+
Sbjct: 278 IREGGHDVPSNKDVTSLDWNT-NGTLLATGSYDGFARIW-----TEDGNLAS--TLGQHK 329
Query: 216 SVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLA 275
+ + W+ K N SAG D +IWD T + +Q+ H L + N A
Sbjct: 330 GPIFALKWNRKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNTTFA 386
Query: 276 TASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W + +
Sbjct: 387 SCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQ- 443
Query: 336 GDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
E D + E+ + N N +++S + D+TV++W +
Sbjct: 444 --EVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDI 492
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF---- 266
++ H + V + W + L S DD L IW ++ ++AH KE+ + +
Sbjct: 408 FQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTG 466
Query: 267 ----NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
NP + +LA+AS D+TV L+D+ + V H L+ H E V+ V + P+ + LAS +
Sbjct: 467 PATSNPNSNIMLASASFDSTVRLWDIER-GVCTHTLTKHQEPVYSVAFSPDGK-YLASGS 524
Query: 323 DDRRLMVWD 331
D+ + +W+
Sbjct: 525 FDKCVHIWN 533
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 53/240 (22%), Positives = 99/240 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 228 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ N L + D IW N + H+ + L +N ++
Sbjct: 287 SNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNRKGNYI 344
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N T AS + D + V
Sbjct: 345 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQNN--TTFASCSTDMCIHVC--- 397
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
R+G ++ P F GH +++ W+ + +++S +DD T+++W M +
Sbjct: 398 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQEV 445
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 64/250 (25%), Positives = 114/250 (45%)
Query: 144 DCAKQAEKQQDDCDPDLR-LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD 202
D ++ + + D+ +++ L+GH Y + G L+S S D I WD+ + +
Sbjct: 315 DFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFT-N 372
Query: 203 KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVN 262
V+ H Y + D+S H F SA D +W + H +V+
Sbjct: 373 TVLYQGHAYPVWDL---DISPH---SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVD 426
Query: 263 YLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
+ F+P + + LAT S+D TV L+ ++ + + + H V + + PN + LAS+
Sbjct: 427 CVKFHPNSNY-LATGSTDKTVRLWSTQQGN-SVRLFTGHRGPVLSLAFSPNGK-YLASAG 483
Query: 323 DDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDN 382
+D+RL +WDL G EL GH I+ +++ D +++S + DN
Sbjct: 484 EDQRLKLWDLAS-GTLYKELR-------------GHTDNITSLTFSP-DSSLVASASMDN 528
Query: 383 TVQVWQMTDS 392
+V+VW + S
Sbjct: 529 SVRVWDIRSS 538
>RGD|1586275 [details] [associations]
symbol:Gemin5 "gem (nuclear organelle) associated protein 5"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017069 "snRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1586275 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016604
GO:GO:0017069 OrthoDB:EOG43BMN0 GeneTree:ENSGT00620000088064
IPI:IPI00957464 ProteinModelPortal:D3ZGD0 PRIDE:D3ZGD0
Ensembl:ENSRNOT00000044299 UCSC:RGD:1586275 Uniprot:D3ZGD0
Length = 1501
Score = 118 (46.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+T P LS HT +V + W P+H+ L S+ D VWD R E
Sbjct: 628 ITEPYRTLSGHTAKVTSLAWSPHHDGRLVSACYDGTAQVWDALR--------------EE 673
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
LF+ GH+ ++ +W+ DP I S ADD V W
Sbjct: 674 PLFNFRGHRGRLLCVAWSPVDPECIYSGADDFCVYRW 710
Score = 116 (45.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 34/153 (22%), Positives = 65/153 (42%)
Query: 162 LKGHDKE--GYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
L GH + G+ S P + + S D + +WDV + K + H H+ +
Sbjct: 60 LVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDV----ETKAVVTEHAL--HQHTIS 113
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
+ W ++L S GD+ ++ Q + + + L+ +P++E ++A
Sbjct: 114 ALHWSPTVKDLIVS-GDEKGVVFCYWLNRSDSQHLFTEPRAIFCLTCSPHHENLVAIGYK 172
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP 312
D V + D+ K +H L H +E+ + W P
Sbjct: 173 DGIVIIIDISKKGEVVHRLRGHDDEIHSIAWCP 205
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 20/68 (29%), Positives = 28/68 (41%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFK-EGY 181
C P NLV V + D +K+ E RL+GHD E + ++W P E
Sbjct: 159 CSPHHENLVAIGYKDGIVIIIDISKKGEVVH-------RLRGHDDEIHSIAWCPLSGEDC 211
Query: 182 LVSGSHDN 189
L +N
Sbjct: 212 LSINQEEN 219
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 181 (68.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 57/236 (24%), Positives = 114/236 (48%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
G+++ P + LV+ + I LWD ++ +H +E HE V + +H + +
Sbjct: 16 GIAFHPSRPWVLVA-LFSSTIQLWDY------RMGTLLHRFEDHEGPVRGLDFH-PTQPI 67
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F SAGDD + +W L TN+ + H V + F+ W+++ AS D T+ +++ +
Sbjct: 68 FVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIIS-ASDDQTIRIWNWQN 126
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI-------G----DEQ 339
+ L+ H V ++ P + ++++S D+ + +WD++ + G +EQ
Sbjct: 127 RK-EIACLTGHNHFVMCAQFHPTDDLIVSASLDET-IRIWDISGLRKRHSAPGTSSFEEQ 184
Query: 340 LE-----LDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
+ LD G + F GH ++ S++ P ++S +DD V++W+M+
Sbjct: 185 MSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSG-SDDRQVKLWRMS 239
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 58/238 (24%), Positives = 108/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIQWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + +H ++V + ++P E +LA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE-ILASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ ++ + L+SHT ++ +++D + E L S +DD + +W G+
Sbjct: 170 NTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGER-LVSCSDDTTVKIWRAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
D + + G H I D SW K + ++ DD +++++ T DS
Sbjct: 229 SAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKETSDS 285
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/183 (25%), Positives = 89/183 (48%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQ 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A +L SH ++ W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAA------VLNSHTQDVKRVV---WHPTKE-ILASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMY 175
Score = 161 (61.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 57/232 (24%), Positives = 110/232 (47%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IQWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+SHT++V +V W P E +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE-ILASASYDNTIKMY-----A 176
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+E ++ D D L H + I ++ + ++S +DD TV++W+
Sbjct: 177 EEPIDNDW-DCTATLT----SHTSTIWGIDFDADGERLVSC-SDDTTVKIWR 222
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 63/284 (22%), Positives = 113/284 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI-------- 242
+ +W+V A D + V +H V+ V WH E L ++ D+ M
Sbjct: 127 VWIWEV---AGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPIDND 183
Query: 243 WDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF--------------DM 288
WD T +H + + F+ E L + S DTTV ++ D
Sbjct: 184 WDCTATLT-----SHTSTIWGIDFDADGER-LVSCSDDTTVKIWRAYHPGNSAGVATPDQ 237
Query: 289 RKMTVPLHILSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
+ + + LS H+ ++ V W ++A++ D + ++ D + + E
Sbjct: 238 QTVWKCVCTLSGQHSRAIYDVSWC-KLTGLIATACGDDGIRIF--KETSDSKPD---EPT 291
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
+L H ++ WN + S +DD T+++W++T+
Sbjct: 292 FEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVTE 335
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + +H ++V + ++P E VLA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE-VLASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ ++ + L+SHT ++ +++D + E L S +DD + +W G+
Sbjct: 170 NTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGER-LVSCSDDTTIKIWKAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
D + + G H I D SW K + ++ DD +++++ T DS
Sbjct: 229 SAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKETSDS 285
Score = 160 (61.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 48/183 (26%), Positives = 91/183 (49%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLR--TNQTQQRVK-AHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L T T+ + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A +L SH ++ W+ V++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAA------VLNSHTQDVKRVV---WHPTKE-VLASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMY 175
Score = 158 (60.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 60/232 (25%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGSTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+SHT++V +V W P E VLAS++ D + ++ + +
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE-VLASASYDNTIKMYAEDPV- 180
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
D + A L SH I DF D + S +DD T+++W+
Sbjct: 181 DNDWDCTAT------LTSHTSTIWGI-DFD---ADGERLVSCSDDTTIKIWK 222
Score = 141 (54.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 61/279 (21%), Positives = 115/279 (41%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDC-QLMIWDLRTNQ 249
+ +W+V A D + V +H V+ V WH E L ++ D+ ++ D N
Sbjct: 127 VWIWEV---AGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVDND 183
Query: 250 TQ--QRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF--------------DMRKMTV 293
+ +H + + F+ E L + S DTT+ ++ D + +
Sbjct: 184 WDCTATLTSHTSTIWGIDFDADGER-LVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVWK 242
Query: 294 PLHILSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELL 352
+ LS H+ ++ V W ++A++ D + ++ D + + E +L
Sbjct: 243 CVCTLSGQHSRAIYDVSWC-KLTGLIATACGDDGIRIF--KETSDSKPD---EPTFEQLT 296
Query: 353 FSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
G H ++ WN + S +DD T+++W++T+
Sbjct: 297 AEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVTE 335
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 59/238 (24%), Positives = 115/238 (48%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
GLS+ P + LVS H I LWD ++ + ++ H+ V V++H + L
Sbjct: 14 GLSFHPKRPWILVS-LHSGVIQLWDY------RMHTLLEKFDEHDGPVRGVAFH-QQMPL 65
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + AH V ++F+ W+L+ AS D T+ +++ +
Sbjct: 66 FVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILS-ASDDQTIRIWNWQS 124
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE-----LD-- 343
+ +L+ H V ++ P + ++++S D + + VWD++ + + + LD
Sbjct: 125 RNC-ICVLTGHNHYVMCAQFHPTEDQIVSASLD-QTVRVWDISGLRKKNVAPGPGGLDDH 182
Query: 344 ------AED--GPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
A D G + + H GH + S++ P ++S ADD V++W+M +
Sbjct: 183 LKGHPGATDLFGQADAVVKHVLEGHDRGFNWASFHPTLPLIVSG-ADDRLVKLWRMNE 239
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 44/173 (25%), Positives = 85/173 (49%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 284 FALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNT 334
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M+
Sbjct: 335 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMK 393
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
+ T +H L +H++E++ ++W +PN +LAS++ D + +WD+ R
Sbjct: 394 QDTC-VHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVER 445
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF---- 266
++ H + V + W + L S DD L IW ++ + ++AH KE+ + +
Sbjct: 359 FQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTG 417
Query: 267 ----NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
NP + +LA+AS D+TV L+D+ + V LH L+ H E V+ V + P+ + LAS +
Sbjct: 418 PATSNPNSSIMLASASFDSTVRLWDVER-GVCLHTLTKHQEPVYSVAFSPDGK-YLASGS 475
Query: 323 DDRRLMVWD 331
D+ + +W+
Sbjct: 476 FDKCVHIWN 484
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/235 (24%), Positives = 104/235 (44%)
Query: 160 LRLKGHD----KEGYGLSWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+R GHD K+ L W+ +G L++ GS+D +W +D + + H
Sbjct: 229 IREGGHDVPSNKDVTSLDWN--SDGTLLATGSYDGFARIW-----TEDGNLAS--TLGQH 279
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVL 274
+ + + W+ K N SAG D +IWD T + +Q+ H L + N
Sbjct: 280 KGPIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNTTF 336
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
A+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W + +
Sbjct: 337 ASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQ 394
Query: 335 IGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D + D + E+ + N N +++S + D+TV++W +
Sbjct: 395 --DTCVH-DLQAHSKEIYTIKWSPTGPATS---NPNSSIMLASASFDSTVRLWDV 443
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 52/236 (22%), Positives = 98/236 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 179 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ + L + D IW N + H+ + L +N ++
Sbjct: 238 SNKDVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNKKGNYI 295
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N T AS + D + V
Sbjct: 296 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQNN--TTFASCSTDMCIHVC--- 348
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
R+G ++ P F GH +++ W+ + +++S +DD T+++W M
Sbjct: 349 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSM 392
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 172 (65.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH K + +SP E +L S S D I +W +K I H+ + DV
Sbjct: 68 LAGHTKAVSAVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDV 120
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+W + L S DD L +W+L T ++ + +K H V +FNP + ++ + S D
Sbjct: 121 AWS-SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 178
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE 341
+V ++D+R L L +H++ V V ++ + +++SS D +WD G
Sbjct: 179 SVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL-CRIWD-TASGQCLKT 235
Query: 342 LDAEDGPP 349
L +D PP
Sbjct: 236 LIDDDNPP 243
Score = 142 (55.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 60/266 (22%), Positives = 111/266 (41%)
Query: 70 TSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPN 129
T+ PN L P + SN N++ + K K + G + PN
Sbjct: 24 TAPSGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPN 83
Query: 130 LVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYG-LSWSPFKEGYLVSGSHD 188
+SS + + K + + GH K G ++WS LVSGS D
Sbjct: 84 GEWLASSSADKLIKIWGAYDGKFEKT------ISGH-KLGISDVAWSSDSR-LLVSGSDD 135
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTN 248
+ +W++S K + + H + V +++ ++ NL S D + IWD+RT
Sbjct: 136 KTLKVWELSTGKSLKTL------KGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTG 188
Query: 249 QTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQV 308
+ + + AH V+ + FN ++ ++S D ++D ++ V V
Sbjct: 189 KCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 309 EWDPNHETVLASSADDRRLMVWDLNR 334
++ PN + +LA++ D+ L +WD ++
Sbjct: 248 KFSPNGKYILAATLDNT-LKLWDYSK 272
Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 298 LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGG 357
L+ HT+ V V++ PN E LASS+ D+ + +W A DG E S G
Sbjct: 68 LAGHTKAVSAVKFSPNGEW-LASSSADKLIKIWG------------AYDGKFEKTIS--G 112
Query: 358 HKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
HK ISD +W+ + ++S +DD T++VW+++
Sbjct: 113 HKLGISDVAWSSDSRLLVSG-SDDKTLKVWELS 144
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 229 NLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM 288
NL S D + IWD+RT + + + AH V+ + FN ++ ++S D ++D
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 227
Query: 289 RKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGP 348
++ V V++ PN + +LA++ D+ L +WD ++ G
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSK------------G- 273
Query: 349 PELLFSHGGHKAK----ISDFSWNKNDPWVISSVADDNTVQVWQM 389
+ L ++ GHK + ++FS W++S ++DN V +W +
Sbjct: 274 -KCLKTYTGHKNEKYCIFANFSVT-GGKWIVSG-SEDNMVYIWNL 315
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 171 (65.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQ-TQQRVKA--HEKEVNYLS 265
H + H+ + V+WH K N F S G+D + IW L N T + + + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDR 325
++P E+ LA+AS D T A++ + T L H EV V W + +LA+ + D+
Sbjct: 67 WSPCGEY-LASASFDATTAIWSKHECTATLE---GHENEVKSVSWSRSGG-LLATCSRDK 121
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
+ +W++ GD++ E A +L H + W+ +++S + DNT++
Sbjct: 122 SVWIWEV--AGDDEFECAA------VL---NAHSQDVKRVVWHPTKE-ILASASYDNTIK 169
Query: 386 VW 387
++
Sbjct: 170 MY 171
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 46/172 (26%), Positives = 84/172 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W +S K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNSFASCGEDKAIRIWSLSGNTWTTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
V W E L SA D IW ++ ++ HE EV +S++ + +LAT S D
Sbjct: 65 VRWSPCGEYL-ASASFDATTAIWS--KHECTATLEGHENEVKSVSWSR-SGGLLATCSRD 120
Query: 281 TTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
+V ++++ +L++H+++V +V W P E +LAS++ D + ++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE-ILASASYDNTIKMY 171
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 72/280 (25%), Positives = 116/280 (41%)
Query: 136 SSCEVYV----FDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKI 191
S C Y+ FD A A + +C L +GH+ E +SWS G L + S D +
Sbjct: 68 SPCGEYLASASFD-ATTAIWSKHECTATL--EGHENEVKSVSWSR-SGGLLATCSRDKSV 123
Query: 192 CLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ 251
+W+V A D + V AH V+ V WH E L ++ D+ M + +
Sbjct: 124 WIWEV---AGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDW 180
Query: 252 Q---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR------------KMTVPLH 296
+ +H V + F+ E L + S D T+ ++ K TV
Sbjct: 181 DCTATLSSHTSTVWSIDFDADGER-LVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKC 239
Query: 297 I--LSS-HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPP-ELL 352
+ LS HT ++ V W ++AS+ D D RI E + D P ELL
Sbjct: 240 VCTLSGLHTRAIYDVSWC-KLTGLIASACGD------DAIRIFKESSD-SKRDAPSFELL 291
Query: 353 FSH-GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
S H+ ++ WN + + S +DD T+++W++ +
Sbjct: 292 TSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKLQE 331
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 171 (65.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 60/238 (25%), Positives = 106/238 (44%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + H ++V + ++P + VLA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-VLASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F + L+SHT V+ +++D + E L S +DD + +W G+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGER-LVSCSDDTTIKIWKAYHPGN 228
Query: 338 EQLELDAEDGPPE--LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
E + G H I D SW K + ++ DD +++++ T DS
Sbjct: 229 TAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKETSDS 285
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A P H + W+ V++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAAVLNP---------HTQDVKRVVWHPTKD-VLASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 58/232 (25%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+ HT++V +V W P + VLAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTIKMF-----A 176
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+E ++ D + L SH I DF D + S +DD T+++W+
Sbjct: 177 EEPIDNDWDC--TATLTSHTSTVWGI-DFD---ADGERLVSCSDDTTIKIWK 222
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/284 (21%), Positives = 111/284 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI-------- 242
+ +W+V A D + V H V+ V WH + L ++ D+ M
Sbjct: 127 VWIWEV---AGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDND 183
Query: 243 WDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM------------RK 290
WD T +H V + F+ E L + S DTT+ ++ +
Sbjct: 184 WDCTATLT-----SHTSTVWGIDFDADGER-LVSCSDDTTIKIWKAYHPGNTAGVATPEQ 237
Query: 291 MTV---PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
TV + H+ ++ V W ++A++ D + ++ D + + E
Sbjct: 238 QTVWKCVCTVSGQHSRAIYDVSWC-KLTGLIATACGDDGIRIF--KETSDSKPD---EPT 291
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
++ G H ++ WN + S +DD T+++W++++
Sbjct: 292 FEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVSE 335
>UNIPROTKB|E2RIE8 [details] [associations]
symbol:GEMIN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017069 "snRNA binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016604 GO:GO:0017069 OMA:GQNHSRI
GeneTree:ENSGT00620000088064 EMBL:AAEX03003072
Ensembl:ENSCAFT00000027933 Uniprot:E2RIE8
Length = 1509
Score = 116 (45.9 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHE 315
+ E++YL + N V+ + + + +T+ P LS HT ++ V W P+H+
Sbjct: 593 QPELSYLMASGSNNAVIYVHNLKSVIESNPESPVTITEPYRTLSGHTAKITSVAWSPHHD 652
Query: 316 TVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVI 375
L S++ D VWD R E L + GH+ ++ +W+ DP I
Sbjct: 653 GRLVSASYDGTAQVWDTLR--------------EEPLCNFRGHRGRLLCVAWSPLDPDCI 698
Query: 376 SSVADDNTVQVW 387
S ADD V W
Sbjct: 699 YSGADDFCVYKW 710
Score = 100 (40.3 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y L++SP G L G D I +W+ ++ + D + ++ +S V + WH E
Sbjct: 383 YSLAFSPVDMGCLAIGVGDGMIRIWNTLSIKNN--YDVKNFWQGVKSKVTALCWHPTKEG 440
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKA-HEKEVNYLSFNP 268
DD ++ ++D +N+ Q H+K V L++ P
Sbjct: 441 CLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP 480
Score = 61 (26.5 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSP 176
C P +LV V + D +K+ E RL+GHD E + ++W P
Sbjct: 159 CSPHHEDLVAIGYKDGIVVIIDISKKGEVIH-------RLRGHDDEIHSIAWCP 205
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 175 (66.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 45/173 (26%), Positives = 83/173 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 325 FALKWNR-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNM 375
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M
Sbjct: 376 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM- 433
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
K V +H L +H +E++ ++W +PN +LAS++ D + +WD+ R
Sbjct: 434 KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIER 486
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/175 (25%), Positives = 80/175 (45%)
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
H + W + + S +C+ V L D+ + ++ H + V + W
Sbjct: 362 HSAPALDVDW----QNNMTFASCSTDMCI-HVCRLGCDRPVKT---FQGHTNEVNAIKWD 413
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF--------NPYNEWVLAT 276
+ L S DD L IW ++ ++AH KE+ + + NP + +LA+
Sbjct: 414 -PSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLAS 472
Query: 277 ASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
AS D+TV L+D+ + V H L+ H E V+ V + P+ LAS + D+ + +W+
Sbjct: 473 ASFDSTVRLWDIER-GVCTHTLTKHQEPVYSVAFSPDGR-YLASGSFDKCVHIWN 525
Score = 144 (55.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H+ + + W+ K N SAG D +IWD T + +Q+ H L + N
Sbjct: 320 HKGPIFALKWNRKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNMT 376
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
A+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W +
Sbjct: 377 FASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMK 434
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
+ E D + E+ + N N +++S + D+TV++W +
Sbjct: 435 Q---EVCIHDLQAHNKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDI 484
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 156 CD-PDLRLKGHDKEGYGLSWSPFKEGYLVSG-SHDNKICLWDVSALAQDKVIDAMHVYEA 213
CD P +GH E + W P G L++ S D + +W ++ Q+ I H +A
Sbjct: 393 CDRPVKTFQGHTNEVNAIKWDP--SGMLLASCSDDMTLKIW---SMKQEVCI---HDLQA 444
Query: 214 HESVVEDVSWH-----LKNEN---LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLS 265
H + + W N N + SA D + +WD+ + H++ V ++
Sbjct: 445 HNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVA 504
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDR 325
F+P + LA+ S D V +++ + + +H T +F+V W+ + V +SA D
Sbjct: 505 FSPDGRY-LASGSFDKCVHIWNTQSGNL-VHSYRG-TGGIFEVCWNARGDKV-GASASDG 560
Query: 326 RLMVWDLNR 334
+ V DL +
Sbjct: 561 SVCVLDLRK 569
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 52/240 (21%), Positives = 99/240 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 220 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 278
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ N L + D IW N + H+ + L +N ++
Sbjct: 279 SNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNRKGNYI 336
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N+ T + S D M +
Sbjct: 337 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQ-NNMTFASCSTD----MCIHVC 389
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDSI 393
R+G ++ P F GH +++ W+ + +++S +DD T+++W M +
Sbjct: 390 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQEV 437
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 67/271 (24%), Positives = 123/271 (45%)
Query: 120 RARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLR-LKGHDKEGYGLSWSPFK 178
R++ + +P+ V T S + D ++ E ++D+ +++ L+GH Y +
Sbjct: 298 RSKKLKSEPHHVDT--SRIRL-ACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADS 354
Query: 179 EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDC 238
G L+S S D I WD+ + + V+ H Y + + S + F S D
Sbjct: 355 SG-LLSCSEDMSIRYWDLGSFT-NTVLYQGHAYPVWDVDISPFSLY------FASGSHDR 406
Query: 239 QLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
+W + H +V+ + F+P + + LAT S+D TV L+ ++ + +
Sbjct: 407 TARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLF 464
Query: 299 SSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGH 358
+ H V + + PN + LAS+ +D+RL +WDL G EL GH
Sbjct: 465 TGHRGPVLSLSFSPNGK-YLASAGEDQRLKLWDLAS-GTLFKELR-------------GH 509
Query: 359 KAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
I+ +++ D +I+S + DN+V+VW +
Sbjct: 510 TDSITSLAFSP-DSGLIASASMDNSVRVWDI 539
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 160 LRL-KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVV 218
LR+ GH + + + P YL +GS D + LW AQ +++ ++ H V
Sbjct: 419 LRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWS----AQQG--NSVRLFTGHRGPV 471
Query: 219 EDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATAS 278
+S+ N SAG+D +L +WDL + + ++ H + L+F+P + ++A+AS
Sbjct: 472 LSLSFS-PNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASAS 529
Query: 279 SDTTVALFDMR 289
D +V ++D+R
Sbjct: 530 MDNSVRVWDIR 540
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 65/297 (21%), Positives = 128/297 (43%)
Query: 108 IAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDK 167
+ + + +G R + P G +S C +K++ +C L +GH+
Sbjct: 51 VCKSVLGEGHQRTVRKVSWSP--CGNYLASASFDATTCIWMKKKEEFECITTL--EGHEN 106
Query: 168 EGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKN 227
E ++W+P L + S D + +W+V +++ + + V +H V+ V WH N
Sbjct: 107 EVKSVAWAP-SGSLLATCSRDKSVWVWEVD---EEEEYECVSVLNSHTQDVKHVVWH-PN 161
Query: 228 ENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATASSDTTVAL 285
+ L SA D + ++ + ++ H V L+F+ E LAT S D TV +
Sbjct: 162 QELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQ-LATCSDDKTVRI 220
Query: 286 F------DMRKMTVP-----LHILSSHTEEVFQVEWDPNHET-VLASSADDRRLMVWDLN 333
+ + + P + HT V+ V W NH T +A++ D + +++ +
Sbjct: 221 WRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNW--NHLTGAIATACGDDAVRIFEED 278
Query: 334 RIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
G + L+ P L +H H ++ +W+ +P +++S +DD + W+
Sbjct: 279 P-GSDPLQ------PTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFWR 328
Score = 158 (60.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 59/233 (25%), Positives = 104/233 (44%)
Query: 161 RLKGH-DKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R+ H D + L+W+P L S D I +W D + + E H+ V
Sbjct: 10 RVSAHPDSRCWFLAWNP-SGTLLASCGGDRTIRIWGKDG---DNWVCKSVLGEGHQRTVR 65
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATA 277
VSW N SA D IW + + + ++ HE EV +++ P +LAT
Sbjct: 66 KVSWSPCG-NYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGS-LLATC 123
Query: 278 SSDTTVALF--DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
S D +V ++ D + + +L+SHT++V V W PN E + ++S DD
Sbjct: 124 SRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDD----------- 172
Query: 336 GDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+L + ED + GH + + ++++ +++ +DD TV++W+
Sbjct: 173 -SVKLYREEEDDWV-CCATLEGHTSTVWSLAFDQTGEQ-LATCSDDKTVRIWR 222
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 42/183 (22%), Positives = 83/183 (45%)
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLR-TNQTQQRV--KAHEKEVNYLSFNPYNEWVLATA 277
++W+ + L S G D + IW N + V + H++ V +S++P + LA+A
Sbjct: 22 LAWN-PSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNY-LASA 79
Query: 278 SSDTTVALFDMRKMTVP-LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
S D T ++ +K + L H EV V W P+ ++LA+ + D+ + VW+++
Sbjct: 80 SFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSG-SLLATCSRDKSVWVWEVDEEE 138
Query: 337 DEQ----LELDAED------GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQV 386
+ + L +D P + L + + + + + D WV + + +T V
Sbjct: 139 EYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYR-EEEDDWVCCATLEGHTSTV 197
Query: 387 WQM 389
W +
Sbjct: 198 WSL 200
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 60/238 (25%), Positives = 106/238 (44%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + H ++V + ++P + VLA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-VLASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F + L+SHT V+ +++D + E L S +DD + +W G+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGER-LVSCSDDTTIKIWRAYHPGN 228
Query: 338 EQLELDAEDGPPE--LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT-DS 392
E + G H I D SW K + ++ DD +++++ T DS
Sbjct: 229 TAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKETSDS 285
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A P H + W+ V++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAAVLNP---------HTQDVKRVVWHPTKD-VLASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 58/232 (25%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWGTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+ HT++V +V W P + VLAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTIKMF-----A 176
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+E ++ D + L SH I DF D + S +DD T+++W+
Sbjct: 177 EEPIDNDWDC--TATLTSHTSTVWGI-DFD---ADGERLVSCSDDTTIKIWR 222
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 60/284 (21%), Positives = 111/284 (39%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI-------- 242
+ +W+V A D + V H V+ V WH + L ++ D+ M
Sbjct: 127 VWIWEV---AGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDND 183
Query: 243 WDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDM------------RK 290
WD T +H V + F+ E L + S DTT+ ++ +
Sbjct: 184 WDCTATLT-----SHTSTVWGIDFDADGER-LVSCSDDTTIKIWRAYHPGNTAGVATPEQ 237
Query: 291 MTV---PLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
TV + H+ ++ V W ++A++ D + ++ D + + E
Sbjct: 238 QTVWKCVCTVSGQHSRAIYDVSWC-KLTGLIATACGDDGIRIF--KETSDSKPD---EPT 291
Query: 348 PPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
++ G H ++ WN + S +DD T+++W++++
Sbjct: 292 FEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVSE 335
>UNIPROTKB|F1NYJ6 [details] [associations]
symbol:GEMIN5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0017069 "snRNA binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0016604
GO:GO:0017069 OMA:GQNHSRI GeneTree:ENSGT00620000088064
EMBL:AADN02028674 IPI:IPI00586887 ProteinModelPortal:F1NYJ6
Ensembl:ENSGALT00000006272 Uniprot:F1NYJ6
Length = 1518
Score = 126 (49.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 38/153 (24%), Positives = 71/153 (46%)
Query: 162 LKGHDKEGYGLSWSPFKE-GYL-VSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
L GH + ++ P +E G L SGS D + LWD + L V+ H H++ +
Sbjct: 51 LIGHTERIAAFAFCPHREHGALCASGSDDGSVRLWDAAGL----VLRGEH--GLHQNAIT 104
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
+ W ++L S GD+ +++ + Q+ + + L+ +P++E ++A
Sbjct: 105 ALHWSPLVKDLIVS-GDEKGVIVCYWHSRSDSQQFFPEPRTIFCLTCSPHHENLVAVGYK 163
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDP 312
D V + D+ + LH L H +E+ + W P
Sbjct: 164 DGMVVIIDISRKKEVLHRLRGHDDEIHCLAWCP 196
Score = 105 (42.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPE 350
+T P L+ HT +V + W P+HE L S+ D VWD+ + E
Sbjct: 621 ITEPFRTLAGHTSKVTSLSWSPHHEGRLVSACYDGTAQVWDVMK--------------EE 666
Query: 351 LLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
L ++ GH+ ++ W+ D I + ADD +V W
Sbjct: 667 PLCNYRGHQGRLLCVQWSPVDSDSIYTGADDFSVHKW 703
Score = 66 (28.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFK-EGY 181
C P NLV V + D +++ E RL+GHD E + L+W P EG
Sbjct: 150 CSPHHENLVAVGYKDGMVVIIDISRKKEVLH-------RLRGHDDEIHCLAWCPVPGEGR 202
Query: 182 L 182
L
Sbjct: 203 L 203
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 179 (68.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 39/158 (24%), Positives = 78/158 (49%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L SG D+++ +WD+S Q ++ + S + V+W+ K ++ GSA + ++
Sbjct: 145 LASGGSDSEVFIWDLSDPTQPSALNPGSKSQ-QSSDITCVAWNKKVAHILGSASYNGYIV 203
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLS--FNPYNEWVLATASSDT---TVALFDMRKMTVPLH 296
IWDL++ +T + ++ Y S ++P + AS D + +D+R T P+
Sbjct: 204 IWDLKSKKTLMTINDRNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLRNTTSPVK 263
Query: 297 ILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
+ H + V+ + W P+ +L S+ D + W+ +R
Sbjct: 264 SMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNFDR 301
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/273 (23%), Positives = 120/273 (43%)
Query: 135 TSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDN-KICL 193
+S E+Y D ++ KQ +K +G + S F+ G +++G+ DN I L
Sbjct: 41 SSKLEIYSLDITNES-KQMTLKGSTSSSTRFNKVVWGQASSNFQNG-IIAGAMDNGTINL 98
Query: 194 WDVSALAQDKVIDA---------MHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWD 244
WD + + D + V + H V+ + ++++N NL S G D ++ IWD
Sbjct: 99 WDPTKILASDATDGGGSDDQSSLIGVGQRHSGPVQSIDFNVQNPNLLASGGSDSEVFIWD 158
Query: 245 LRTNQTQQRV-----KAHEK-EVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHIL 298
L ++ TQ K+ + ++ +++N +L +AS + + ++D++ + I
Sbjct: 159 L-SDPTQPSALNPGSKSQQSSDITCVAWNKKVAHILGSASYNGYIVIWDLKSKKTLMTIN 217
Query: 299 SSHTEEVFQ-VEWDPNHET-VLASSADDRR--LMVWDLNRIGDEQLELDAEDGPPELLFS 354
+ + ++ + W P+ T ++A+S DD + WDL P + S
Sbjct: 218 DRNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLRNT----------TSPVK---S 264
Query: 355 HGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
GHK + SW +D ++ S DN W
Sbjct: 265 MEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCW 297
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 169 (64.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 121 ARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD---CDPDLRLKGHDKEGYGLSWSPF 177
+RC N GT +SC D A + ++ D C L+ GH + ++WSP
Sbjct: 17 SRCWYVAWNPKGTLLASCGG---DRAIRIWGREGDSWECKTVLQ-DGHQRAVRKVAWSPC 72
Query: 178 KEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDD 237
YL S S D C+W ++ + + V E HE+ V+ V+W + N + D
Sbjct: 73 GN-YLASASFDATTCIWK----KKNDDFECLTVLEGHENEVKCVAW-APSGNQLATCSRD 126
Query: 238 CQLMIWDLRTNQTQQRVK---AHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVP 294
+ IW++ + V +H ++V ++ ++P E +LA+ S D V ++
Sbjct: 127 KSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYKEEDDDWE 185
Query: 295 LHI-LSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
L HT V+ + +DP+ + LAS +DDR + +W
Sbjct: 186 CRATLEGHTSTVWGLTFDPSGQR-LASCSDDRTVKIW 221
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 58/257 (22%), Positives = 109/257 (42%)
Query: 150 EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMH 209
+K+ DD + L+GH+ E ++W+P L + S D + +W+V +D+ + +
Sbjct: 89 KKKNDDFECLTVLEGHENEVKCVAWAP-SGNQLATCSRDKSVWIWEVDE--EDEY-ECVS 144
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQR--VKAHEKEVNYLSFN 267
V +H V+ V WH E L S D + ++ + + R ++ H V L+F+
Sbjct: 145 VVNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFD 203
Query: 268 PYNEWVLATASSDTTVALF---------DMRKMTVPLHILSSHTEEVFQVEWDPNHETVL 318
P + LA+ S D TV ++ D V + H V+ + W P L
Sbjct: 204 PSGQR-LASCSDDRTVKIWKECQPGGGQDTAWKCV-CTLSGFHGRTVYDIAWCPL-TGAL 260
Query: 319 ASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKNDPWVIS 376
A++ D + V+ + D D P L +H H ++ +W+ + ++
Sbjct: 261 ATACGDDGVRVFKEDETADP-------DQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLV 313
Query: 377 SVADDNTVQVWQMTDSI 393
S +D+ + VW +
Sbjct: 314 SCSDNGEIAVWNYQSEV 330
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 53/237 (22%), Positives = 102/237 (43%)
Query: 114 VDGEVNRARCMPQKP--NLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYG 171
++G N +C+ P N + T + V++++ E+ + +C + H ++
Sbjct: 101 LEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVD---EEDEYECVSVVN--SHTQDVKH 155
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
+ W P +E L S S+DN +C++ +D + E H S V +++ + L
Sbjct: 156 VVWHPTQE-LLASCSYDNNVCVYK----EEDDDWECRATLEGHTSTVWGLTFDPSGQRL- 209
Query: 232 GSAGDDCQLMIW-DLRTNQTQQRV-KA-------HEKEVNYLSFNPYNEWVLATASSDTT 282
S DD + IW + + Q K H + V +++ P LATA D
Sbjct: 210 ASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTG-ALATACGDDG 268
Query: 283 VALF--------DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD 331
V +F D ++ H+ +H+++V + W P +L S +D+ + VW+
Sbjct: 269 VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 325
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 211 YEAH-ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLSF 266
+ AH +S V+W+ K L S G D + IW + + + H++ V +++
Sbjct: 11 FNAHPDSRCWYVAWNPKG-TLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAW 69
Query: 267 NPYNEWVLATASSDTTVALFDMRKMTVP-LHILSSHTEEVFQVEWDPNHETVLASSADDR 325
+P + LA+AS D T ++ + L +L H EV V W P+ LA+ + D+
Sbjct: 70 SPCGNY-LASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ-LATCSRDK 127
Query: 326 RLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQ 385
+ +W E+D ED E + H + W+ +++S + DN V
Sbjct: 128 SVWIW----------EVDEED-EYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYDNNVC 175
Query: 386 VWQMTD 391
V++ D
Sbjct: 176 VYKEED 181
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 44/173 (25%), Positives = 83/173 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 283 FALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNT 333
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM- 391
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
K +H L +H++E++ ++W +PN +LAS++ D + +WD+ R
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVER 444
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 58/235 (24%), Positives = 104/235 (44%)
Query: 160 LRLKGHD----KEGYGLSWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+R GHD K+ L W+ +G L++ GS+D +W +D + + H
Sbjct: 228 IREGGHDVPSNKDVTSLDWN--SDGTLLATGSYDGFARIW-----TEDGNLAS--TLGQH 278
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVL 274
+ + + W+ K N SAG D +IWD T + +Q+ H L + N
Sbjct: 279 KGPIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNTTF 335
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
A+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W + +
Sbjct: 336 ASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQ 393
Query: 335 IGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D + D + E+ + N N +++S + D+TV++W +
Sbjct: 394 --DACVH-DLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDV 442
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF---- 266
++ H + V + W + L S DD L IW ++ + ++AH KE+ + +
Sbjct: 358 FQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 267 ----NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
NP + +LA+AS D+TV L+D+ + V +H L+ H E V+ V + P+ + LAS +
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVER-GVCIHTLTKHQEPVYSVAFSPDGK-YLASGS 474
Query: 323 DDRRLMVWD 331
D+ + +W+
Sbjct: 475 FDKCVHIWN 483
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 52/236 (22%), Positives = 98/236 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 178 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ + L + D IW N + H+ + L +N ++
Sbjct: 237 SNKDVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNKKGNYI 294
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N T AS + D + V
Sbjct: 295 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQNN--TTFASCSTDMCIHVC--- 347
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
R+G ++ P F GH +++ W+ + +++S +DD T+++W M
Sbjct: 348 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSM 391
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 44/173 (25%), Positives = 83/173 (47%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
+ L W+ K Y++S D +WD +A + H + DV W +N
Sbjct: 283 FALKWNK-KGNYILSAGVDKTTIIWDAHTG------EAKQQFPFHSAPALDVDW--QNNT 333
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMR 289
F S D + + L ++ + + H EVN + ++P + +LA+ S D T+ ++ M
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSM- 391
Query: 290 KMTVPLHILSSHTEEVFQVEW--------DPNHETVLASSADDRRLMVWDLNR 334
K +H L +H++E++ ++W +PN +LAS++ D + +WD+ R
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVER 444
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 58/235 (24%), Positives = 104/235 (44%)
Query: 160 LRLKGHD----KEGYGLSWSPFKEGYLVS-GSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+R GHD K+ L W+ +G L++ GS+D +W +D + + H
Sbjct: 228 IREGGHDVPSNKDVTSLDWN--SDGTLLATGSYDGFARIW-----TEDGNLAS--TLGQH 278
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVL 274
+ + + W+ K N SAG D +IWD T + +Q+ H L + N
Sbjct: 279 KGPIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA--LDVDWQNNTTF 335
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
A+ S+D + + + P+ HT EV ++WDP+ +LAS +DD L +W + +
Sbjct: 336 ASCSTDMCIHVCRLG-CDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQ 393
Query: 335 IGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D + D + E+ + N N +++S + D+TV++W +
Sbjct: 394 --DACVH-DLQAHSKEIYTIKWSPTGPATS---NPNSNIMLASASFDSTVRLWDV 442
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF---- 266
++ H + V + W + L S DD L IW ++ + ++AH KE+ + +
Sbjct: 358 FQGHTNEVNAIKWD-PSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTG 416
Query: 267 ----NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
NP + +LA+AS D+TV L+D+ + V +H L+ H E V+ V + P+ + LAS +
Sbjct: 417 PATSNPNSNIMLASASFDSTVRLWDVER-GVCIHTLTKHQEPVYSVAFSPDGK-YLASGS 474
Query: 323 DDRRLMVWD 331
D+ + +W+
Sbjct: 475 FDKCVHIWN 483
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 52/236 (22%), Positives = 98/236 (41%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAM--H-VYEAHESV- 217
L+GH+ E + +W+P + L SGS D+ +W+++ + + H + E V
Sbjct: 178 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 218 ----VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
V + W+ + L + D IW N + H+ + L +N ++
Sbjct: 237 SNKDVTSLDWN-SDGTLLATGSYDGFARIWTEDGNLAST-LGQHKGPIFALKWNKKGNYI 294
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
L+ A D T ++D H+ V+W N T AS + D + V
Sbjct: 295 LS-AGVDKTTIIWDAHTGEAKQQF-PFHSAPALDVDWQNN--TTFASCSTDMCIHVC--- 347
Query: 334 RIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
R+G ++ P F GH +++ W+ + +++S +DD T+++W M
Sbjct: 348 RLGCDR---------PVKTFQ--GHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSM 391
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 172 (65.6 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 51/178 (28%), Positives = 95/178 (53%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P LRL+GH +++ P + YLVS S D LWDV + + + E H
Sbjct: 257 PLLRLEGHLARVGRVAFHPSGD-YLVSASFDTTWRLWDVHTGVE------LLMQEGHSEG 309
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ ++ + +L S G+D IWDLR+ ++ + H +++ ++++P N + LAT+
Sbjct: 310 IFSIACQ-PDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSP-NGYQLATS 367
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEW-DPNHETVLASSADDRRLMVWD-LN 333
S+D TV ++D+RK+++ H + +H+ V V + + +A+S D + +W+ LN
Sbjct: 368 SADDTVKIWDLRKVSLA-HTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 163 KGHDKEGYGLSWSPFKEGY--------LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAH 214
+GH GL W P + + L +G+ DN +CLW S Q + + E H
Sbjct: 211 RGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKAS---QSTPLLRL---EGH 264
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVL 274
+ V V++H + L SA D +WD+ T + H + + ++ P V
Sbjct: 265 LARVGRVAFHPSGDYLV-SASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLV- 322
Query: 275 ATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
++ +D ++D+R + +L H ++ + W PN + SSADD + +WDL +
Sbjct: 323 SSGGNDAIGRIWDLRSGK-SIMVLDEHIRQIVAMAWSPNGYQLATSSADDT-VKIWDLRK 380
Query: 335 I 335
+
Sbjct: 381 V 381
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 120 (47.3 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 41/174 (23%), Positives = 79/174 (45%)
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQR-----VKAHE------KEVNYLSFN-PYNEWVLATA 277
L S D + +WDLR N T ++A+ +++ Y + Y L +
Sbjct: 225 LISSGAVDGIIKMWDLRRNYTAYHQNPLPLQAYPYPGSCTRKLGYSGLSLDYTGSRLFSN 284
Query: 278 SSDTTVALFDMRKM-TVPLHILSSHTEEVFQVEWDPN-HETVLASSADDRRLMVWDLNRI 335
+D + +F++ + T P+ + S H+ F V+ + + LAS + D + +W ++
Sbjct: 285 CTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQFLASGSSDHNVYIWKIS-- 342
Query: 336 GDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
D + P L GH +++ +W D I+S +DDNTV++W++
Sbjct: 343 -------DPKQAPMMLQ----GHSQEVTSVAWCPTDFTKIASCSDDNTVRIWRL 385
Score = 102 (41.0 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
+ HD + ++W P LV+ S D LWDV D + ++ H+ ++ V+
Sbjct: 94 QAHDNAVFDIAWVP-GTNCLVTASGDQTARLWDVITG------DLLGTFKGHQCSLKSVA 146
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRTNQ 249
++ + + +F + G D +MIWD R ++
Sbjct: 147 FYKQEKAVFSTGGRDGNIMIWDTRCSK 173
Score = 44 (20.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD 202
KGH +++ ++ +G D I +WD +D
Sbjct: 136 KGHQCSLKSVAFYKQEKAVFSTGGRDGNIMIWDTRCSKKD 175
>UNIPROTKB|C9JPP3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 IPI:IPI00974561 ProteinModelPortal:C9JPP3 SMR:C9JPP3
STRING:C9JPP3 Ensembl:ENST00000445722 ArrayExpress:C9JPP3
Bgee:C9JPP3 Uniprot:C9JPP3
Length = 87
Score = 150 (57.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 32 VSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSE 91
++H LEWPSLT W+P +P D F++H+ VLGTHTS++ N L+IA LP D++
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQ 57
>UNIPROTKB|E9PND5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 EMBL:AC114489 HGNC:HGNC:9887 ChiTaRS:RBBP4
IPI:IPI00979287 ProteinModelPortal:E9PND5 SMR:E9PND5
Ensembl:ENST00000490500 ArrayExpress:E9PND5 Bgee:E9PND5
Uniprot:E9PND5
Length = 68
Score = 150 (57.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 32 VSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSE 91
++H LEWPSLT W+P +P D F++H+ VLGTHTS++ N L+IA LP D++
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQ 57
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 169 (64.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P + L GH E + ++ + Y+ SGS D I LW + ++ + H
Sbjct: 52 PLMELSGHSGEIFCAKFNSAGQ-YIASGSMDRSILLWRANGDCEN-----YGILSGHRGA 105
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ D+ W ++ +F SA D L WDL T + +R HE+ +N L + E +L +
Sbjct: 106 ILDLQWSRDSDIIF-SASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSG 164
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
S D T+ ++D RK +I S + + +E + S D + VWD+ +
Sbjct: 165 SDDGTIGIWDPRKKHAADYIESDFPVTAVAIS-EAGNE--IYSGGIDNDIKVWDVRK 218
>UNIPROTKB|Q9NQW1 [details] [associations]
symbol:SEC31B "Protein transport protein Sec31B"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 EMBL:AL133352 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 EMBL:AF274863 EMBL:AL080141
EMBL:BX640914 EMBL:BC034946 EMBL:BC044569 EMBL:BC144313
IPI:IPI00023442 IPI:IPI00426029 IPI:IPI00853086 IPI:IPI00923389
IPI:IPI00954279 PIR:T12526 RefSeq:NP_056305.1 UniGene:Hs.18889
ProteinModelPortal:Q9NQW1 SMR:Q9NQW1 IntAct:Q9NQW1 STRING:Q9NQW1
PhosphoSite:Q9NQW1 DMDM:74762753 PaxDb:Q9NQW1 PRIDE:Q9NQW1
DNASU:25956 Ensembl:ENST00000370345 Ensembl:ENST00000451524
GeneID:25956 KEGG:hsa:25956 UCSC:uc001krc.1 UCSC:uc010qpo.1
CTD:25956 GeneCards:GC10M102237 HGNC:HGNC:23197 HPA:HPA035882
HPA:HPA040819 MIM:610258 neXtProt:NX_Q9NQW1 PharmGKB:PA162402792
InParanoid:Q9NQW1 OMA:RLECLYE OrthoDB:EOG470TGM PhylomeDB:Q9NQW1
ChiTaRS:SEC31B GenomeRNAi:25956 NextBio:47564 ArrayExpress:Q9NQW1
Bgee:Q9NQW1 CleanEx:HS_SEC31B Genevestigator:Q9NQW1 Uniprot:Q9NQW1
Length = 1179
Score = 177 (67.4 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 50/223 (22%), Positives = 103/223 (46%)
Query: 172 LSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLF 231
L +PF+ L SG+ D++I +WD++ L + + + ++ +SW+ + +++
Sbjct: 127 LDLNPFQGNLLASGASDSEIFIWDLNNLNVPMTLGSKSQQPPED--IKALSWNRQAQHIL 184
Query: 232 GSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNY--LSFNPYNEWVLATASSDT---TVALF 286
SA + ++WDLR N+ +V H ++ L+++P L S D + L+
Sbjct: 185 SSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDIATQLVLCSEDDRLPVIQLW 244
Query: 287 DMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAED 346
D+R + PL +L SH+ + V W +L +SA D +++ +L
Sbjct: 245 DLRFASSPLKVLESHSRGILSVSWSQADAELLLTSAKDSQILCRNL-------------- 290
Query: 347 GPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQM 389
G E+++ + D W DP V S+ + + + ++ +
Sbjct: 291 GSSEVVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLYSV 333
Score = 131 (51.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 58/245 (23%), Positives = 102/245 (41%)
Query: 157 DPDLRLKGHD-----KEGYGLSWSPFKEGYLVS-----GSHDN-KICLWDVSALAQDKVI 205
DP L LK + L W F G L S G DN + L++V+ +
Sbjct: 52 DPSLDLKHRGVLSALSRFHKLVWGSFGSGLLESSGVIVGGGDNGMLILYNVTHILSSGKE 111
Query: 206 DAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV--KAHE--KEV 261
+ + H V + + NL S D ++ IWDL + K+ + +++
Sbjct: 112 PVIAQKQKHTGAVRALDLNPFQGNLLASGASDSEIFIWDLNNLNVPMTLGSKSQQPPEDI 171
Query: 262 NYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVF--QVEWDPNHETVLA 319
LS+N + +L++A ++D+RK P+ +S H+ + + W P+ T L
Sbjct: 172 KALSWNRQAQHILSSAHPSGKAVVWDLRK-NEPIIKVSDHSNRMHCSGLAWHPDIATQLV 230
Query: 320 SSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVA 379
++D RL V L +L P ++L SH I SW++ D ++ + A
Sbjct: 231 LCSEDDRLPVIQL-------WDLRFASSPLKVLESHS---RGILSVSWSQADAELLLTSA 280
Query: 380 DDNTV 384
D+ +
Sbjct: 281 KDSQI 285
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 65/251 (25%), Positives = 116/251 (46%)
Query: 144 DCAKQAEKQQDDCDPDLR-LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD 202
D ++ + + DD +++ L+GH Y + G L+S S D I WD+ + +
Sbjct: 319 DILEEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFT-N 376
Query: 203 KVIDAMHVYEAHESVVEDVSWHLKNENL-FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEV 261
V+ Y+ H V DV + +L F S D +W + H +V
Sbjct: 377 TVL-----YQGHAYPVWDVD--ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADV 429
Query: 262 NYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASS 321
+ + F+P + + LAT S+D TV L+ ++ + + + H V + + PN + LAS+
Sbjct: 430 DCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSPNGK-YLASA 486
Query: 322 ADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADD 381
+D+RL +WDL G EL GH I+ +++ D +I+S + D
Sbjct: 487 GEDQRLKLWDLAS-GTLFKELR-------------GHTDNITSLTFSP-DSSLIASASMD 531
Query: 382 NTVQVWQMTDS 392
N+V+VW + ++
Sbjct: 532 NSVRVWDIRNT 542
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 172 (65.6 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 77/290 (26%), Positives = 115/290 (39%)
Query: 53 YSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNEN-PVIPKVEIAQK 111
Y A+ V FV GTH P + AD + SES P+ K + A +
Sbjct: 82 YPANQGQEVEYFVAGTHPYPPGPGVALTADTKIQRMPSESAAQSLAVALPLQTKAD-ANR 140
Query: 112 IRVDGEVNRA-----RCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRL---- 162
G R R P N + +T + + K + P +L
Sbjct: 141 TAPSGSEYRHPGASDRPQPTAMNSIVMETGNTKNSALMAKKAPTMPKPQWHPPWKLYRVI 200
Query: 163 KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVS 222
GH ++ P + + V+GS D I +WD LA K+ ++ H S V V
Sbjct: 201 SGHLGWVRCIAVEPGNQ-WFVTGSADRTIKIWD---LASGKLKLSL---TGHISTVRGVI 253
Query: 223 WHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTT 282
++ LF S G+D Q+ WDL N+ + H V L +P + VL T S D+T
Sbjct: 254 VSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID-VLVTCSRDST 311
Query: 283 VALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
++D+R +H LS HT V V ++ S D + +WDL
Sbjct: 312 ARIWDVRTKA-SVHTLSGHTNAVATVRCQAAEPQIITGS-HDTTIRLWDL 359
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 60/264 (22%), Positives = 114/264 (43%)
Query: 132 GTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLK---GHDKEGYGLSWSPFKEGYLVSGSHD 188
G S+ Y+F C + + + D + + ++ GH YGL P + LV+ S D
Sbjct: 251 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID-VLVTCSRD 309
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTN 248
+ +WDV A ++H H + V V + + D + +WDL
Sbjct: 310 STARIWDVRTKA------SVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAG 362
Query: 249 QTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQV 308
+T+ + H+K V + +P + A+ S D + + + + LS H + +
Sbjct: 363 KTRVTLTNHKKSVRAVVLHP-RHYTFASGSPDN-IKQWKFPDGSF-IQNLSGHNAIINTL 419
Query: 309 EWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWN 368
N + VL S AD+ + +WD R G + A P L S G I +++
Sbjct: 420 T--VNSDGVLVSGADNGTMHLWDW-RTGYNFQRVHAAVQPGSL-DSESG----IFACAFD 471
Query: 369 KNDPWVISSVADDNTVQVWQMTDS 392
+++ ++++ AD T++V++ D+
Sbjct: 472 QSESRLLTAEAD-KTIKVYREDDT 494
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 176 (67.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 58/230 (25%), Positives = 101/230 (43%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P + + K G+ W+ + YL S +D + LWDV+ + I H E HE
Sbjct: 765 PAIEMPNRSKLS-GVCWNNYIRNYLASSDYDGIVKLWDVTT---GQAIS--HFIE-HEKR 817
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
V + S DDC + +W++ ++ + V + F+P + +LA
Sbjct: 818 AWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIR-NIANVCCVQFSPQSSHLLAFG 876
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
SSD +D+R + P ILS H + V ++ N ET++ +S D+ L +WDL +
Sbjct: 877 SSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDN-ETLVTASTDNT-LKLWDLKKTTH 934
Query: 338 EQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW 387
L +A L F GGH + + + +D ++ ++ N V +
Sbjct: 935 GGLSTNA----CSLTF--GGHTNEKNFVGLSTSDGYIACG-SETNEVYAY 977
>CGD|CAL0000444 [details] [associations]
symbol:PGA63 species:5476 "Candida albicans" [GO:0030127
"COPII vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000633 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000444 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005198 GO:GO:0015629
GO:GO:0015031 GO:GO:0007155 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:NOG248389 KO:K14005 RefSeq:XP_718724.1 RefSeq:XP_718807.1
ProteinModelPortal:Q5AAU3 STRING:Q5AAU3 GeneID:3639524
GeneID:3639607 KEGG:cal:CaO19.13598 KEGG:cal:CaO19.6217
InterPro:IPR009917 Pfam:PF07304 Uniprot:Q5AAU3
Length = 1265
Score = 177 (67.4 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 53/243 (21%), Positives = 104/243 (42%)
Query: 166 DKEGYGLSWS-PFK---EGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEA--HESVVE 219
D Y L+WS PF+ +G L + + WD L + K + V+++ H V+
Sbjct: 63 DNRFYALAWSKPFEGRPQGLLAGAFENGTVEFWDADVLIKTKDLAKASVHKSNKHTGAVK 122
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQ---TQQRVKAHEKEVNYLSFNPYNEWVLAT 276
+ ++ ++ + G + Q+ IWD +T + E+ ++S+N +LA+
Sbjct: 123 SLQFNPIQNHVLVTGGSNGQIFIWDTKTFSEPFAPGQAMTPMDEITFVSWNNSVSHILAS 182
Query: 277 ASSDTTVALFDMRKMTVPLHIL---SSHTEEVFQVEWDPNHETVLASSADDRR---LMVW 330
+ +++D++ LH+ + V W P+ T L +++D+ ++ W
Sbjct: 183 TGNGGYTSIWDLKTKREVLHLSYTGAGGRANFSYVSWHPSQSTKLITASDNDSCPLILTW 242
Query: 331 DLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMT 390
DL + P ++L GHK + W K DP ++ S DN+ +W
Sbjct: 243 DLRN----------SNAPEKIL---EGHKKGVLSLDWCKQDPTLLLSSGKDNSTFLWNPI 289
Query: 391 DSI 393
+ I
Sbjct: 290 EGI 292
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 168 (64.2 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 58/238 (24%), Positives = 107/238 (44%)
Query: 164 GHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSW 223
GH + + WSP + YL S S D +W S+ + E HE+ V+ VSW
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSS----GEFECNATLEGHENEVKSVSW 111
Query: 224 HLKNENLFGSAGDDCQLMIWDLRTN---QTQQRVKAHEKEVNYLSFNPYNEWVLATASSD 280
++ L + D + IW++ + + + H ++V + ++P + +LA+AS D
Sbjct: 112 S-RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-ILASASYD 169
Query: 281 TTVALFDMRKMTVPLHI---LSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +F + L+SHT V+ +++D + E L S +DD + +W G+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGER-LVSCSDDTTIKIWRAYHPGN 228
Query: 338 EQ--LELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVW-QMTDS 392
D + + G H I D SW K + ++ DD ++++ + +DS
Sbjct: 229 TAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDG-IRIFKESSDS 285
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/183 (24%), Positives = 86/183 (46%)
Query: 209 HVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV---KAHEKEVNYLS 265
H + H+ + V+WH K N+F S G+D + IW L N + H++ + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIR 66
Query: 266 FNPYNEWVLATASSDTTVALFDMRKMTVPLHI-LSSHTEEVFQVEWDPNHETVLASSADD 324
++P ++ LA+AS D T A++ + L H EV V W + +LA+ + D
Sbjct: 67 WSPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGG-LLATCSRD 124
Query: 325 RRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTV 384
+ + +W++ GD++ E A P H + W+ +++S + DNT+
Sbjct: 125 KSVWIWEV--AGDDEFECAAVLNP---------HTQDVKRVVWHPTKD-ILASASYDNTI 172
Query: 385 QVW 387
+++
Sbjct: 173 KMF 175
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 57/232 (24%), Positives = 108/232 (46%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALA-QDKVIDAMHVYEAHESVVED 220
L+GH +G++W P K S D I +W ++ K I + + H+ + +
Sbjct: 10 LQGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTI----LSDGHKRTIRE 64
Query: 221 VSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATAS 278
+ W + L SA D IW + + + ++ HE EV +S++ + +LAT S
Sbjct: 65 IRWSPCGQYL-ASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCS 122
Query: 279 SDTTVALFDMR--KMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIG 336
D +V ++++ +L+ HT++V +V W P + +LAS++ D + ++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD-ILASASYDNTIKMF-----A 176
Query: 337 DEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
+E ++ D + L SH I DF D + S +DD T+++W+
Sbjct: 177 EEPIDNDWDC--TATLTSHTSTVWGI-DFD---ADGERLVSCSDDTTIKIWR 222
Score = 131 (51.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 63/286 (22%), Positives = 108/286 (37%)
Query: 136 SSCEVYV----FDCAKQA-EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNK 190
S C Y+ FD K + + + L+GH+ E +SWS G L + S D
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSR-SGGLLATCSRDKS 126
Query: 191 ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMI-------- 242
+ +W+V A D + V H V+ V WH + L ++ D+ M
Sbjct: 127 VWIWEV---AGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDND 183
Query: 243 WDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALF------DMRKMTVP-- 294
WD T +H V + F+ E L + S DTT+ ++ + + P
Sbjct: 184 WDCTATLT-----SHTSTVWGIDFDADGER-LVSCSDDTTIKIWRAYHPGNTAGVATPDQ 237
Query: 295 -------LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDG 347
+ H+ ++ V W + + DD RI E + D
Sbjct: 238 QTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGI-------RIFKESSD-SKPDE 289
Query: 348 PP--ELLFSHGGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTD 391
P ++ G H ++ WN + S +DD T+++W++T+
Sbjct: 290 PTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVTE 335
>UNIPROTKB|Q8TEQ6 [details] [associations]
symbol:GEMIN5 "Gem-associated protein 5" species:9606 "Homo
sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=TAS] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0017069 "snRNA binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0034660
"ncRNA metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0006461 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0015030
GO:GO:0000387 GO:GO:0034660 GO:GO:0016604 GO:GO:0017069 KO:K13133
EMBL:AY063750 EMBL:AK074066 EMBL:AC008421 EMBL:BC008776
EMBL:BC014147 EMBL:BC113614 EMBL:AK022748 EMBL:AL117665
IPI:IPI00291783 PIR:T17345 RefSeq:NP_001239085.1 RefSeq:NP_056280.2
UniGene:Hs.483921 ProteinModelPortal:Q8TEQ6 SMR:Q8TEQ6
IntAct:Q8TEQ6 STRING:Q8TEQ6 PhosphoSite:Q8TEQ6 DMDM:296439335
PaxDb:Q8TEQ6 PRIDE:Q8TEQ6 Ensembl:ENST00000285873 GeneID:25929
KEGG:hsa:25929 UCSC:uc003lvx.3 CTD:25929 GeneCards:GC05M154247
H-InvDB:HIX0005347 HGNC:HGNC:20043 HPA:HPA037393 MIM:607005
neXtProt:NX_Q8TEQ6 PharmGKB:PA134945791 HOGENOM:HOG000231391
HOVERGEN:HBG051721 InParanoid:Q8TEQ6 OMA:GQNHSRI OrthoDB:EOG43BMN0
PhylomeDB:Q8TEQ6 GenomeRNAi:25929 NextBio:47472 ArrayExpress:Q8TEQ6
Bgee:Q8TEQ6 CleanEx:HS_GEMIN5 Genevestigator:Q8TEQ6
GermOnline:ENSG00000082516 Uniprot:Q8TEQ6
Length = 1508
Score = 122 (48.0 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 37/132 (28%), Positives = 58/132 (43%)
Query: 258 EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTV--PLHILSSHTEEVFQVEWDPNHE 315
+ E++YL + N V+ + T + +T+ P LS HT ++ V W P+H+
Sbjct: 593 QPELSYLMASGSNNAVIYVHNLKTVIESSPESPVTITEPYRTLSGHTAKITSVAWSPHHD 652
Query: 316 TVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVI 375
L S++ D VWD R E L + GH+ ++ +W+ DP I
Sbjct: 653 GRLVSASYDGTAQVWDALR--------------EEPLCNFRGHRGRLLCVAWSPLDPDCI 698
Query: 376 SSVADDNTVQVW 387
S ADD V W
Sbjct: 699 YSGADDFCVHKW 710
Score = 90 (36.7 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 170 YGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNEN 229
Y L++S G L G D I +W+ ++ + D + ++ +S V + WH E
Sbjct: 383 YSLAFSSVDIGSLAIGVGDGMIRVWNTLSIKNN--YDVKNFWQGVKSKVTALCWHPTKEG 440
Query: 230 LFGSAGDDCQLMIWDLRTNQTQQRVKA-HEKEVNYLSFNP 268
DD ++ ++D +N+ Q H+K V L++ P
Sbjct: 441 CLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP 480
Score = 61 (26.5 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 123 CMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSP 176
C P +LV V + D +K+ E RL+GHD E + ++W P
Sbjct: 159 CSPHHEDLVAIGYKDGIVVIIDISKKGEVIH-------RLRGHDDEIHSIAWCP 205
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 167 (63.8 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 45/161 (27%), Positives = 81/161 (50%)
Query: 174 WSPFKEGYLVSGSHDNK-ICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFG 232
+SP +G L++ + D+K + LWD ++ + +H + H V +H +
Sbjct: 154 FSP--DGRLIASASDDKTVKLWDKTSR------ECIHSFCEHGGFANHVEFH-PSGTCIA 204
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
+AG D + +WD+R N+ Q + H VN LSF+P +++ TAS+D+T+ + D+ +
Sbjct: 205 AAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLI-TASNDSTLKILDLLEGR 263
Query: 293 VPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLN 333
+ L+ L H V + + AS D ++MVW N
Sbjct: 264 L-LYTLHGHQGPATCVAFSRTGD-FFASGGSDEQVMVWKTN 302
Score = 166 (63.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 158 PDLR---LKGHDKEGYGLSWSPFKEGYLV-SGSHDNKICLWDVSALAQDKVIDAMHVYEA 213
P +R L GH + +SP G+LV SGS D +CLW S + V ++A
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSP--SGHLVASGSRDKTVCLWVPSVKGESTV------FKA 102
Query: 214 HESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWV 273
H + V V + ++L +A DD + +W + + + H V F+P +
Sbjct: 103 HTATVRSVHFSSDGQSLV-TASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR-L 160
Query: 274 LATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWD-- 331
+A+AS D TV L+D +H H VE+ P+ T +A++ D+ + VWD
Sbjct: 161 IASASDDKTVKLWDKTSREC-IHSFCEHGGFANHVEFHPSG-TCIAAAGTDKTVKVWDVR 218
Query: 332 LNRI 335
+NR+
Sbjct: 219 MNRL 222
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 211 YEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYN 270
+ H + V + L + L + D C L IW ++ + H+ V + F+P
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSC-LKIWSMKPQMRAYCLVGHKDAVMCVQFSPSG 74
Query: 271 EWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVW 330
V A+ S D TV L+ + + + +HT V V + + ++++ +S DD+ + VW
Sbjct: 75 HLV-ASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTAS-DDKTIKVW 131
Query: 331 DLNR 334
++R
Sbjct: 132 TVHR 135
>DICTYBASE|DDB_G0276797 [details] [associations]
symbol:lysA "peptidoglycan-binding LysM
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002482 InterPro:IPR015943 InterPro:IPR018392
Pfam:PF00400 Pfam:PF01476 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00257 SMART:SM00320 dictyBase:DDB_G0276797
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0016998 InterPro:IPR006571 Pfam:PF07534
SMART:SM00584 RefSeq:XP_642883.1 ProteinModelPortal:Q7KWK0
EnsemblProtists:DDB0185074 GeneID:8620749 KEGG:ddi:DDB_G0276797
InParanoid:Q7KWK0 OMA:HIRHITS Uniprot:Q7KWK0
Length = 1405
Score = 177 (67.4 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 53/182 (29%), Positives = 93/182 (51%)
Query: 161 RLKGHDKEGYG--LSWSPFK-EGYL-VSGS-HDNKICLWDVSALAQDKVIDAMHVYEAHE 215
+LK + KE L WS K E +L VS S D I LW+V +K+I + ++H
Sbjct: 107 KLKSNSKEIECDLLKWSTNKSESHLLVSSSLKDYSIYLWNVR---DEKLI--VKFSKSHI 161
Query: 216 SVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTN-QTQQRVKAHEK---EVNYLSFNPYNE 271
+ +SW+ + NL SA DC I+D+R Q + + K ++ +++NP +
Sbjct: 162 RHITSLSWNTQETNLIASASSDCMANIFDIRERTQGSGGISTNFKARSNLSQIAWNPNSS 221
Query: 272 WVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHET-VLASSADDRRLMVW 330
+LAT+++ + ++D+RK PL +S+H + +EW P +L ++ + VW
Sbjct: 222 TMLATSNA-SEFNIWDIRKFGSPLSCVSAHIGSISNIEWSPKERNQLLTCGPTEKCVKVW 280
Query: 331 DL 332
D+
Sbjct: 281 DV 282
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 50/241 (20%), Positives = 95/241 (39%)
Query: 126 QKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSG 185
Q+ NL+ + +S C +FD E+ Q K ++W+P +++
Sbjct: 172 QETNLIASASSDCMANIFDIR---ERTQGSGGISTNFKARSNLSQ-IAWNP-NSSTMLAT 226
Query: 186 SHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAG--DDCQLMIW 243
S+ ++ +WD+ K + AH + ++ W K N + G + C + +W
Sbjct: 227 SNASEFNIWDIR-----KFGSPLSCVSAHIGSISNIEWSPKERNQLLTCGPTEKC-VKVW 280
Query: 244 DLRTNQTQQRVKAHEKEVNYLSFNPY-NEWVLATASSDTTVALFDMRKMTVPLH-ILS-- 299
D+ + N F P+ N ++ + SS + R H ILS
Sbjct: 281 DVTPPSNLLHRYNIDSTCNIARFLPFVNNDIIGSISSKGSYNDIQFRNAKCSEHPILSLS 340
Query: 300 -SHTEEVFQVEWDPNH------ETVLASSADDRRLMVWDLNRIGDEQLEL-DAEDGPPEL 351
H + + +W + + S D + +W RI +E +++ EDGPP+L
Sbjct: 341 GGHKDTILNFDWRTTEVAGGEKQHYVTSIGKDNQFNMW---RITNEMIDIFTKEDGPPKL 397
Query: 352 L 352
+
Sbjct: 398 V 398
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 168 (64.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 42/177 (23%), Positives = 81/177 (45%)
Query: 158 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESV 217
P + L GH E + + + P + ++ SGS D I LW+ ++ + H+
Sbjct: 58 PIMELTGHSGEVFAVRFDPTAQ-HIASGSMDRSILLWNTYGQCEN-----YGILSGHKGA 111
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ D+ W ++ +F SA D L WD+ + Q +R HE+ +N + + + +L +A
Sbjct: 112 ILDLQWSRDSKTIF-SASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSA 170
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
S D T+ ++D R+ + L + + + +E S D + VWD+ +
Sbjct: 171 SDDGTMGIWDPRQKEA-IDYLETELPITAVAQSEAGNEVF--SGGIDNAIHVWDIRK 224
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/159 (25%), Positives = 76/159 (47%)
Query: 184 SGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIW 243
SG DN I +WD+ A ++ +M H + + ++ L ++ D + W
Sbjct: 210 SGGIDNAIHVWDIRKKA---IVYSM---AGHMDTITSLEVSPDSQTLLSNSFDST-VRTW 262
Query: 244 DLRT-NQTQQRVKAH-------EKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPL 295
D+R T + ++ + EK + S+NP + + A S D +V ++D + + L
Sbjct: 263 DIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKI-AAGSGDRSVVVWDFKTGKI-L 320
Query: 296 HILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNR 334
+ L H V V + PN+E ++ S++ DR LM+ +L +
Sbjct: 321 YKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGELGK 359
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/133 (25%), Positives = 64/133 (48%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD----KVIDAMHVYEAHESV 217
+ GH L SP + L+S S D+ + WD+ A + D V +++
Sbjct: 231 MAGHMDTITSLEVSPDSQT-LLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPV-GLEKNL 288
Query: 218 VEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ SW+ + + +GD +++WD +T + ++ H+ VN + F P NE ++ +A
Sbjct: 289 IR-ASWNPAGDKIAAGSGDR-SVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSA 346
Query: 278 SSDTTVALFDMRK 290
SSD + L ++ K
Sbjct: 347 SSDRNLMLGELGK 359
Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 233 SAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMT 292
S G D + +WD+R + H + L +P ++ +L+ S D+TV +D+R
Sbjct: 210 SGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSN-SFDSTVRTWDIRPFA 268
Query: 293 -VPLHILSSH------TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAE 345
HI + + + + W+P + + A S D R ++VWD + G
Sbjct: 269 PTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGD-RSVVVWDF-KTG--------- 317
Query: 346 DGPPELLFSHGGHKAKISDFSWN-KNDPWVISSVADDN 382
++L+ GHK ++D + N+P ++S+ +D N
Sbjct: 318 ----KILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRN 351
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 53/236 (22%), Positives = 114/236 (48%)
Query: 171 GLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENL 230
G+S+ P + L S H I LWD ++ + ++ H+ V + +H ++ +
Sbjct: 16 GISFHPTRPWVLTS-LHSGVIQLWDY------RMCVLLEKFDEHDGPVRGICFH-HDQPI 67
Query: 231 FGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRK 290
F S GDD ++ +W+ + + + H + F+ W+++ AS D TV +++ +
Sbjct: 68 FVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIIS-ASDDQTVRIWNWQS 126
Query: 291 MTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLE--------- 341
+ IL+ H V ++ P E ++AS++ D+ + VWD++ + +Q+
Sbjct: 127 RN-SIAILTGHNHYVMCAQFHPT-EDLVASASLDQTVRVWDISGLRKKQMPGGGAPSRPT 184
Query: 342 --LDAE-DGPPELLFSH--GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQMTDS 392
AE G P+ + H GH ++ +++ +P ++S +DD V++W+ ++
Sbjct: 185 GGQQAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSG-SDDRQVKIWRYNET 239
Score = 122 (48.0 bits), Expect = 0.00064, P = 0.00064
Identities = 63/254 (24%), Positives = 105/254 (41%)
Query: 165 HDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWH 224
HD G+ + + VSG D KI +W+ Q + I + H + +H
Sbjct: 52 HDGPVRGICFH-HDQPIFVSGGDDYKIKVWNYK---QKRCIFTLL---GHLDYIRTTFFH 104
Query: 225 LKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVA 284
K + SA DD + IW+ ++ + + H V F+P E ++A+AS D TV
Sbjct: 105 HKYPWII-SASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHP-TEDLVASASLDQTVR 162
Query: 285 LFD---MRKMTVP------------------------LHILSSHTEEVFQVEWDPNHET- 316
++D +RK +P H+L H V W H T
Sbjct: 163 VWDISGLRKKQMPGGGAPSRPTGGQQAELFGQPDAVVKHVLEGHDRGV---NWVAFHHTN 219
Query: 317 -VLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVI 375
+L S +DDR++ +W N + ELD S GH +S ++ N ++
Sbjct: 220 PILVSGSDDRQVKIWRYNET--KAWELD----------SCRGHYNNVSSVIFHPNADLIL 267
Query: 376 SSVADDNTVQVWQM 389
S+ ++D +++VW M
Sbjct: 268 SN-SEDKSIRVWDM 280
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 171 (65.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 76/293 (25%), Positives = 115/293 (39%)
Query: 49 PPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNEN-PVIPKVE 107
P + Y A+ V V GTH P + AD + SES P +V+
Sbjct: 78 PHKQYPANQGQDVEYLVTGTHPYPPGPGVALTADTKIQRMPSESAAQSLAVALPSQTRVD 137
Query: 108 IAQKIRVDGEVNRA----RCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRL- 162
+ E R P N + +TS+ + K + P +L
Sbjct: 138 ANRTAPAGSEYRHPGASDRSQPTAMNSMIMETSNTKNSALMAKKAPTMPKPQWHPPWKLY 197
Query: 163 ---KGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
GH ++ P + + V+GS D I +WD LA K+ ++ H S V
Sbjct: 198 RVISGHLGWVRCIAVEPGNQ-WFVTGSADRTIKIWD---LASGKLKLSL---TGHISTVR 250
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASS 279
V ++ LF S G+D Q+ WDL N+ + H V L +P + VL T S
Sbjct: 251 GVIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID-VLVTCSR 308
Query: 280 DTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDL 332
D+T ++D+R +H LS HT V V ++ S D + +WDL
Sbjct: 309 DSTARIWDVRTKA-SVHTLSGHTNAVATVRCQAAEPQIITGS-HDTTIRLWDL 359
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 60/264 (22%), Positives = 115/264 (43%)
Query: 132 GTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLK---GHDKEGYGLSWSPFKEGYLVSGSHD 188
G S+ Y+F C + + + D + + ++ GH YGL P + LV+ S D
Sbjct: 251 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID-VLVTCSRD 309
Query: 189 NKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTN 248
+ +WDV A ++H H + V V + + D + +WDL
Sbjct: 310 STARIWDVRTKA------SVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAG 362
Query: 249 QTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVP----LHILSSHTEE 304
+T+ + H+K V + +P + + A+ S D ++++ P + LS H
Sbjct: 363 KTRVTLTNHKKSVRAVVLHPLH-YTFASGSPD------NIKQWKFPDGGFIQNLSGHNAI 415
Query: 305 VFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISD 364
+ + N + VL S AD+ + +WD R G + A P L S G I
Sbjct: 416 INTLA--VNTDGVLVSGADNGTMHLWDW-RTGYNFQRVHAAVQPGSL-DSESG----IFA 467
Query: 365 FSWNKNDPWVISSVADDNTVQVWQ 388
++++++ ++++ AD T++V++
Sbjct: 468 CAFDRSESRLLTAEAD-KTIKVYR 490
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 170 (64.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 49/154 (31%), Positives = 76/154 (49%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
+VS S D I +WD + +K ++ + V ++ N SAG D +
Sbjct: 159 IVSCSEDKTIKIWDTT----NK--QCVNNFSDSVGFANFVDFN-PNGTCIASAGSDHAVK 211
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
IWD+R N+ Q + H VN LSF+P L TASSD TV + D+ + + ++ L H
Sbjct: 212 IWDIRMNKLLQHYQVHSCGVNCLSFHPLGN-SLVTASSDGTVKMLDLIEGRL-IYTLQGH 269
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
T VF V + + E +L S D ++++W N I
Sbjct: 270 TGPVFTVSFSKDGE-LLTSGGADAQVLIWRTNFI 302
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 32/134 (23%), Positives = 66/134 (49%)
Query: 201 QDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKE 260
+D +++ ++ H++ + + N +A D LM+W L+ + R H+
Sbjct: 6 EDPILERS--FKGHKAAITSADFS-PNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDV 62
Query: 261 VNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLAS 320
V L F+P +LA+AS D TV L+ + + +HT V V++ + + +L +
Sbjct: 63 VTSLQFSPQGN-LLASASRDRTVRLWVLDRKGKSSEF-KAHTAPVRSVDFSADGQ-LLVT 119
Query: 321 SADDRRLMVWDLNR 334
+++D+ + VW + R
Sbjct: 120 ASEDKSIKVWSMFR 133
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 171 (65.3 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 61/250 (24%), Positives = 113/250 (45%)
Query: 144 DCAKQAEKQQDDCDPDLR-LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD 202
D ++ + + D+ +++ L+GH Y + G L+S S D I WD+ + +
Sbjct: 319 DILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFT-N 376
Query: 203 KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVN 262
V+ H Y + + S + F S D +W + H +V+
Sbjct: 377 TVLYQGHAYPVWDLDISPYSLY------FASGSHDRTARLWSFDRTYPLRIYAGHLADVD 430
Query: 263 YLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSA 322
+ F+P + + LAT S+D TV L+ ++ + + + H V + + PN + LAS+
Sbjct: 431 CVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSPNGK-YLASAG 487
Query: 323 DDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKAKISDFSWNKNDPWVISSVADDN 382
+D+RL +WDL G EL GH I+ +++ D +I+S + DN
Sbjct: 488 EDQRLKLWDLAS-GTLYKELR-------------GHTDNITSLTFSP-DSGLIASASMDN 532
Query: 383 TVQVWQMTDS 392
+V+VW + ++
Sbjct: 533 SVRVWDIRNT 542
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 166 (63.5 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 147 KQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVID 206
++ E Q+ + L L GH + +SP E +L S + D I +W A D +
Sbjct: 20 REEEPQKPNYALRLTLAGHSAAISSVKFSPNGE-WLASSAADALIIIWG----AYDG--N 72
Query: 207 AMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSF 266
H + DV+W + L SA DD L +WD+R+ + + +K H V F
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSRLV-SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDF 131
Query: 267 NPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRR 326
NP + ++ + S D +V ++++ K L LS+H++ + V ++ N +++ S D
Sbjct: 132 NPPSN-LIVSGSFDESVKIWEV-KTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGL- 188
Query: 327 LMVWDLNRIGDEQLELDAEDGPPELLF 353
+WD + L A++G P + F
Sbjct: 189 CRIWDA--ASGQCLRTLADEGNPPVSF 213
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/234 (25%), Positives = 108/234 (46%)
Query: 161 RLKGH-DKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVE 219
R+ H D + L+W+P L S D KI +W D I + E H+ V
Sbjct: 10 RVPAHPDSRCWFLAWNP-SGTLLASCGGDRKIRIWGTEG---DSWICKSVLSEGHQRTVR 65
Query: 220 DVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ--QRVKAHEKEVNYLSFNPYNEWVLATA 277
V+W N SA D IW + + ++ HE EV +++ P +LAT
Sbjct: 66 KVAWSPCG-NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATC 123
Query: 278 SSDTTVALFDMRKMTVP--LHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRI 335
S D +V ++++ + + +LSSHT++V V W P+ E + ++S DD
Sbjct: 124 SRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDT---------- 173
Query: 336 GDEQLELDAEDGPPELLFSH-GGHKAKISDFSWNKNDPWVISSVADDNTVQVWQ 388
++L E+G + + GH++ + +++ + ++S +DD TV++W+
Sbjct: 174 ----VKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWR 222
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 64/257 (24%), Positives = 114/257 (44%)
Query: 150 EKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMH 209
+K QDD + L+GH+ E ++W+P L + S D + +W+V +D+ + +
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDE--EDEY-ECVS 144
Query: 210 VYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ-QRVKAHEKEVNYLSFNP 268
V +H V+ V WH E L ++ DD + + + ++ HE V ++F+P
Sbjct: 145 VLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDP 204
Query: 269 YNEWVLATASSDTTVALFDM----RKMTV------P----LHILSS-HTEEVFQVEWDPN 313
+ LA+ S D TV ++ + V P + LS HT ++ V W
Sbjct: 205 SGQR-LASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWC-Q 262
Query: 314 HETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH--GGHKAKISDFSWNKND 371
LA++ D D R+ +E D + P L +H H ++ +WN +
Sbjct: 263 LTGALATACGD------DAIRVFEEDPGSDPQQ-PTFSLTAHLRQAHSQDVNCVAWNPKE 315
Query: 372 PWVISSVADDNTVQVWQ 388
P +++S +DD V W+
Sbjct: 316 PGLLASCSDDGEVAFWE 332
>DICTYBASE|DDB_G0288557 [details] [associations]
symbol:vilA "villidin" species:44689 "Dictyostelium
discoideum" [GO:0051707 "response to other organism" evidence=TAS]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IBA]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0030864
"cortical actin cytoskeleton" evidence=IBA] [GO:0030835 "negative
regulation of actin filament depolymerization" evidence=IBA]
[GO:0001891 "phagocytic cup" evidence=IBA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001849 InterPro:IPR003128 InterPro:IPR007122
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02209 PRINTS:PR00597
PROSITE:PS50003 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51089
SMART:SM00153 SMART:SM00233 SMART:SM00262 SMART:SM00320
dictyBase:DDB_G0288557 GO:GO:0007010 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0051015 GenomeReviews:CM000154_GR
GO:GO:0051707 Gene3D:1.10.950.10 SUPFAM:SSF47050 GO:GO:0001891
GO:GO:0030864 InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
EMBL:AAFI02000117 GO:GO:0030835 InterPro:IPR015048
InterPro:IPR015049 Pfam:PF08953 Pfam:PF08954 eggNOG:NOG324767
EMBL:AJ427856 EMBL:U78754 RefSeq:XP_636652.1
ProteinModelPortal:Q8WQ85 EnsemblProtists:DDB0191538 GeneID:8626698
KEGG:ddi:DDB_G0288557 OMA:THEGAQG ProtClustDB:CLSZ2731900
Uniprot:Q8WQ85
Length = 1704
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/196 (28%), Positives = 95/196 (48%)
Query: 157 DPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDV--SALAQDKVIDAMHVYEAH 214
D +KGH +S F + + +GS D I +W+V L +D ++ +
Sbjct: 75 DTPFCIKGHTDPISCFEFSNFNDYVIATGSRDCTIKIWEVPEEGLIKDNLVTPLITLPKQ 134
Query: 215 ESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQ----QRVKAHEKEVNYLSFNPYN 270
+ V V +H ++LF S+ D L IWDL + Q Q++ HE + + +N ++
Sbjct: 135 QKRVTGVYFHPSVDSLFMSSTLDYTLDIWDLSSTGEQSSVIQKLTGHEDLIMSVGWNTWS 194
Query: 271 EW-VLATASSDTTVALFDMRKMTVPLHILSSHT-EEVFQVEW-DPNH-E---TVLASSAD 323
LAT+S D + L+D R + P+ +S+H + F++ W D N E TV A+ +
Sbjct: 195 GGDKLATSSRDKKMRLYDPRSQSTPIQTISTHEGAQGFKLCWADSNGLELICTVGANKSA 254
Query: 324 DRRLMVWDLNRIGDEQ 339
R+L +WD ++ Q
Sbjct: 255 QRQLYLWDPRQLQSSQ 270
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 182 LVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLM 241
L +G D ++ +W V+ L D + H + +E + K E L + +
Sbjct: 36 LATGGDDCRVNVWSVAQLRHD-------LLTGHTTPIESLQISAKEE-LIVAGSQSGSIR 87
Query: 242 IWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSH 301
+WDL + + + H+ + L F+PY +V A+ S DT + L+D+R+ + SH
Sbjct: 88 VWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDVRRKGC-IFKYKSH 145
Query: 302 TEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSH 355
T+ V + + P+ + LAS+ADD + +WDL G E GP ++ H
Sbjct: 146 TQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKVMFEFTGHYGPVNVVEFH 197
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 60/217 (27%), Positives = 101/217 (46%)
Query: 159 DLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVV 218
DL L GH L S KE +V+GS I +WD+ A K++ + H++ +
Sbjct: 56 DL-LTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEAA---KILRTLL---GHKANI 107
Query: 219 EDVSWHLKNENLFGSAGD-DCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATA 277
+ +H F ++G D + +WD+R + K+H + V L F+P +W LA+A
Sbjct: 108 CSLDFHPYGS--FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASA 164
Query: 278 SSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGD 337
+ D TV L+D+ V + H V VE+ P+ E +LAS + + WDL +
Sbjct: 165 ADDHTVKLWDLTAGKVMFEF-TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHV 223
Query: 338 EQLELDAEDGPPE-LLFS------HGGHKAKISDFSW 367
++ E P +LF+ +GG + + + W
Sbjct: 224 VSC-IEEEATPVRCILFNPDGCCLYGGFQDSLRVYGW 259
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 49/179 (27%), Positives = 78/179 (43%)
Query: 162 LKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDV 221
L GH L + P+ ++ SGS D I LWDV + Y++H V +
Sbjct: 100 LLGHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRKG------CIFKYKSHTQAVRCL 152
Query: 222 SWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDT 281
+ + L SA DD + +WDL + H VN + F+P E++LA+ SS
Sbjct: 153 RFSPDGKWL-ASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSM 211
Query: 282 TVALFDMRKMTVPLHILSSHTEEVFQVE---WDPNHETVLASSADDRRLMVWDLNRIGD 337
T+ +D+ K H++S EE V ++P+ + D R+ W+ R D
Sbjct: 212 TIRFWDLEKF----HVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFD 266
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 135 TSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLW 194
T +VY +D Q D P+ + + K +SWS + + L S ++ + LW
Sbjct: 277 TKKIKVYEYDTVIQ--DAVDIHYPENEMTCNSKISC-ISWSSYHKNLLASSDYEGTVILW 333
Query: 195 DVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRV 254
D + KV Y+ HE V ++L + L S DD ++ +W + + +
Sbjct: 334 DGFTGQRSKV------YQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASI 387
Query: 255 KAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSSHTEEVFQVEWDPNH 314
+A + V + F+P + + LA +D V +D+R P+ + H + V ++
Sbjct: 388 EA-KANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGE 446
Query: 315 ETVLASSADDRRLMVWDLNR 334
E V AS+ D +L +W++ +
Sbjct: 447 EIVSAST--DSQLKLWNVGK 464
WARNING: HSPs involving 918 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 406 395 0.00096 117 3 11 22 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1168
No. of states in DFA: 622 (66 KB)
Total size of DFA: 313 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.26u 0.22s 37.48t Elapsed: 00:00:02
Total cpu time: 37.37u 0.22s 37.59t Elapsed: 00:00:02
Start: Sat May 11 03:56:18 2013 End: Sat May 11 03:56:20 2013
WARNINGS ISSUED: 2