Query 015488
Match_columns 406
No_of_seqs 134 out of 1870
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 06:47:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015488.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015488hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 1.9E-51 4.1E-56 363.7 28.7 378 1-389 141-527 (528)
2 KOG0569 Permease of the major 100.0 9.6E-42 2.1E-46 323.4 31.4 359 1-397 88-470 (485)
3 TIGR01299 synapt_SV2 synaptic 100.0 1.8E-41 3.8E-46 341.1 33.9 387 1-389 230-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 2.9E-39 6.2E-44 319.3 31.1 368 1-394 84-501 (502)
5 TIGR00898 2A0119 cation transp 100.0 1.4E-36 3.1E-41 300.8 33.7 347 1-392 155-505 (505)
6 KOG0254 Predicted transporter 100.0 6.1E-35 1.3E-39 288.7 29.9 359 1-395 117-497 (513)
7 KOG0255 Synaptic vesicle trans 100.0 1.7E-34 3.6E-39 286.8 32.8 359 1-398 146-509 (521)
8 PF00083 Sugar_tr: Sugar (and 100.0 1.2E-41 2.6E-46 332.4 -21.4 358 1-395 74-450 (451)
9 PRK10642 proline/glycine betai 100.0 6.8E-32 1.5E-36 265.8 32.8 334 1-391 85-439 (490)
10 PRK10077 xylE D-xylose transpo 100.0 3E-31 6.6E-36 261.0 32.7 355 1-395 83-471 (479)
11 KOG0252 Inorganic phosphate tr 100.0 4.8E-34 1E-38 260.9 11.6 366 1-395 112-511 (538)
12 PRK09952 shikimate transporter 100.0 2.2E-28 4.8E-33 237.5 33.0 319 1-384 92-435 (438)
13 TIGR00879 SP MFS transporter, 100.0 7.8E-29 1.7E-33 243.1 29.2 364 1-391 99-480 (481)
14 PRK10406 alpha-ketoglutarate t 100.0 2E-27 4.4E-32 230.6 33.8 317 1-389 91-430 (432)
15 TIGR00903 2A0129 major facilit 100.0 1.8E-26 3.8E-31 218.4 31.4 307 1-381 54-365 (368)
16 PRK15075 citrate-proton sympor 99.9 1.1E-24 2.4E-29 211.6 33.1 322 1-392 84-430 (434)
17 PRK12307 putative sialic acid 99.9 7.5E-25 1.6E-29 212.4 31.1 328 1-384 81-412 (426)
18 PRK11551 putative 3-hydroxyphe 99.9 2.9E-24 6.2E-29 206.9 33.4 315 1-380 78-395 (406)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.5E-24 5.3E-29 207.5 29.9 315 1-358 71-397 (412)
20 COG2271 UhpC Sugar phosphate p 99.9 6.1E-25 1.3E-29 200.5 20.6 327 3-380 94-433 (448)
21 TIGR00891 2A0112 putative sial 99.9 1E-23 2.3E-28 202.6 28.7 314 1-358 75-392 (405)
22 TIGR00895 2A0115 benzoate tran 99.9 2.2E-23 4.7E-28 199.7 30.4 315 1-353 80-397 (398)
23 PRK11663 regulatory protein Uh 99.9 1.7E-23 3.6E-28 203.3 29.7 339 1-388 86-431 (434)
24 TIGR00893 2A0114 d-galactonate 99.9 3.4E-23 7.4E-28 197.8 28.5 330 1-379 57-397 (399)
25 PRK10489 enterobactin exporter 99.9 1.8E-22 4E-27 195.1 29.5 331 1-398 80-416 (417)
26 PRK03893 putative sialic acid 99.9 1.7E-22 3.6E-27 199.8 29.6 356 1-382 83-455 (496)
27 PRK09556 uhpT sugar phosphate 99.9 8.9E-23 1.9E-27 200.1 25.6 330 1-380 92-448 (467)
28 PRK03545 putative arabinose tr 99.9 2.2E-21 4.7E-26 185.9 33.7 305 1-381 72-380 (390)
29 TIGR00883 2A0106 metabolite-pr 99.9 8.4E-22 1.8E-26 188.4 28.9 293 1-358 63-377 (394)
30 COG2814 AraJ Arabinose efflux 99.9 3.4E-21 7.4E-26 178.2 31.0 307 1-380 76-385 (394)
31 PRK09705 cynX putative cyanate 99.9 3.3E-21 7.2E-26 184.7 32.1 313 1-390 72-390 (393)
32 TIGR00890 2A0111 Oxalate/Forma 99.9 2.4E-21 5.2E-26 184.1 28.9 304 1-373 66-374 (377)
33 PRK11273 glpT sn-glycerol-3-ph 99.9 4.1E-21 8.8E-26 187.5 30.3 336 1-386 91-441 (452)
34 PRK05122 major facilitator sup 99.9 1.5E-20 3.2E-25 180.7 32.6 311 1-391 79-398 (399)
35 TIGR00894 2A0114euk Na(+)-depe 99.9 3.1E-21 6.7E-26 189.2 28.1 326 1-380 104-449 (465)
36 PLN00028 nitrate transmembrane 99.9 3.9E-21 8.5E-26 188.6 28.7 317 1-381 99-433 (476)
37 TIGR00712 glpT glycerol-3-phos 99.9 1.5E-20 3.3E-25 182.8 29.2 336 1-385 89-437 (438)
38 PRK03699 putative transporter; 99.9 3E-20 6.6E-25 178.2 29.8 309 1-381 70-380 (394)
39 TIGR00899 2A0120 sugar efflux 99.9 1.1E-19 2.4E-24 173.0 33.1 306 1-379 61-372 (375)
40 cd06174 MFS The Major Facilita 99.9 1.3E-19 2.7E-24 170.4 30.8 287 1-379 62-350 (352)
41 PRK11010 ampG muropeptide tran 99.9 4.3E-19 9.2E-24 174.6 35.5 314 1-381 78-403 (491)
42 TIGR00900 2A0121 H+ Antiporter 99.9 1.3E-19 2.7E-24 171.6 29.7 292 1-356 62-363 (365)
43 TIGR00881 2A0104 phosphoglycer 99.9 3.5E-20 7.5E-25 176.2 24.0 308 1-358 58-374 (379)
44 TIGR00711 efflux_EmrB drug res 99.9 5.4E-20 1.2E-24 181.4 25.8 333 1-356 65-410 (485)
45 PRK12382 putative transporter; 99.9 3.5E-19 7.5E-24 170.8 30.4 301 1-380 79-388 (392)
46 PRK09874 drug efflux system pr 99.9 4.9E-19 1.1E-23 170.6 30.5 313 1-380 82-397 (408)
47 PRK10091 MFS transport protein 99.9 1.6E-18 3.6E-23 165.5 32.0 305 1-381 66-376 (382)
48 PRK10473 multidrug efflux syst 99.9 3.6E-18 7.7E-23 163.8 33.9 115 1-115 66-182 (392)
49 PRK10504 putative transporter; 99.9 4.1E-18 8.8E-23 167.5 35.0 330 1-357 73-416 (471)
50 PRK10213 nepI ribonucleoside t 99.9 3.4E-18 7.4E-23 163.9 33.1 115 1-115 83-199 (394)
51 PRK15011 sugar efflux transpor 99.9 2.9E-18 6.3E-23 164.5 32.5 310 1-384 79-393 (393)
52 TIGR00710 efflux_Bcr_CflA drug 99.8 9.7E-18 2.1E-22 160.1 34.5 303 1-375 68-378 (385)
53 PRK15402 multidrug efflux syst 99.8 1.6E-17 3.6E-22 160.0 34.9 116 1-116 76-193 (406)
54 PRK14995 methyl viologen resis 99.8 4.8E-18 1E-22 167.7 31.5 332 1-355 69-412 (495)
55 PRK15034 nitrate/nitrite trans 99.8 3.8E-18 8.3E-23 163.4 29.6 303 1-380 98-453 (462)
56 PRK11043 putative transporter; 99.8 1.3E-17 2.8E-22 160.4 33.5 282 1-356 69-357 (401)
57 PF07690 MFS_1: Major Facilita 99.8 6.5E-19 1.4E-23 165.9 23.8 285 1-347 60-352 (352)
58 TIGR00897 2A0118 polyol permea 99.8 1.9E-17 4.1E-22 159.3 34.1 311 1-380 76-400 (402)
59 TIGR00892 2A0113 monocarboxyla 99.8 1E-18 2.2E-23 170.6 25.1 326 1-375 82-415 (455)
60 KOG2533 Permease of the major 99.8 3.7E-19 7.9E-24 171.8 20.4 301 4-355 112-429 (495)
61 PRK11195 lysophospholipid tran 99.8 2E-17 4.3E-22 158.5 31.1 317 1-386 66-385 (393)
62 PRK11102 bicyclomycin/multidru 99.8 9.7E-17 2.1E-21 153.0 33.6 115 1-115 54-170 (377)
63 PRK08633 2-acyl-glycerophospho 99.8 3.8E-17 8.3E-22 177.4 33.1 320 1-383 75-412 (1146)
64 PRK15403 multidrug efflux syst 99.8 1.6E-16 3.6E-21 153.2 32.4 116 1-116 79-196 (413)
65 KOG2532 Permease of the major 99.8 8.3E-18 1.8E-22 162.0 22.7 324 2-380 102-446 (466)
66 PRK03633 putative MFS family t 99.8 2.2E-16 4.7E-21 150.9 32.0 300 1-378 69-369 (381)
67 TIGR00901 2A0125 AmpG-related 99.8 4.2E-17 9.1E-22 154.3 26.2 276 1-340 54-355 (356)
68 PRK11646 multidrug resistance 99.8 1.5E-16 3.4E-21 152.7 30.3 112 1-113 74-187 (400)
69 TIGR00886 2A0108 nitrite extru 99.8 1.8E-17 3.8E-22 157.3 23.3 116 1-116 65-193 (366)
70 PRK11902 ampG muropeptide tran 99.8 8E-16 1.7E-20 148.0 33.5 116 1-116 65-186 (402)
71 COG2223 NarK Nitrate/nitrite t 99.8 5.4E-17 1.2E-21 148.9 23.8 309 1-380 77-400 (417)
72 TIGR00885 fucP L-fucose:H+ sym 99.8 8.6E-16 1.9E-20 147.8 30.6 283 1-356 66-381 (410)
73 PRK10133 L-fucose transporter; 99.8 2.1E-15 4.6E-20 146.3 32.3 298 1-369 89-421 (438)
74 PRK10054 putative transporter; 99.8 1E-15 2.2E-20 146.9 27.4 299 1-369 71-372 (395)
75 PRK11652 emrD multidrug resist 99.7 8.1E-15 1.7E-19 140.7 33.5 116 1-116 71-188 (394)
76 PRK06814 acylglycerophosphoeth 99.7 7.9E-16 1.7E-20 166.9 29.5 291 1-355 80-395 (1140)
77 TIGR00889 2A0110 nucleoside tr 99.7 5.4E-15 1.2E-19 142.8 31.9 326 2-392 68-413 (418)
78 TIGR00896 CynX cyanate transpo 99.7 3.6E-15 7.9E-20 141.0 28.3 283 1-358 63-350 (355)
79 TIGR00792 gph sugar (Glycoside 99.7 4.3E-15 9.4E-20 144.5 28.3 290 1-357 67-381 (437)
80 TIGR00902 2A0127 phenyl propri 99.7 4E-14 8.6E-19 135.3 31.9 285 19-376 87-374 (382)
81 PRK09528 lacY galactoside perm 99.7 5.8E-15 1.3E-19 142.9 26.3 134 250-383 271-405 (420)
82 KOG1330 Sugar transporter/spin 99.7 4E-17 8.7E-22 151.0 10.5 115 2-116 97-214 (493)
83 TIGR00882 2A0105 oligosacchari 99.7 5E-14 1.1E-18 135.3 28.9 315 1-379 66-393 (396)
84 PRK11128 putative 3-phenylprop 99.7 1.7E-13 3.8E-18 130.9 31.3 282 20-374 88-372 (382)
85 KOG2504 Monocarboxylate transp 99.6 1.8E-14 3.9E-19 140.7 21.5 359 1-381 109-476 (509)
86 TIGR00924 yjdL_sub1_fam amino 99.6 6.4E-13 1.4E-17 130.3 29.8 108 1-108 77-188 (475)
87 PTZ00207 hypothetical protein; 99.6 3.4E-13 7.4E-18 133.0 27.5 131 1-133 89-229 (591)
88 PF05977 MFS_3: Transmembrane 99.6 1.3E-12 2.7E-17 128.4 31.3 315 1-380 73-393 (524)
89 PRK09584 tppB putative tripept 99.6 4.8E-13 1E-17 131.9 28.5 103 1-103 86-192 (500)
90 PRK10207 dipeptide/tripeptide 99.6 1E-12 2.2E-17 129.0 29.9 100 1-100 79-182 (489)
91 TIGR02718 sider_RhtX_FptX side 99.6 2.4E-12 5.3E-17 123.3 30.8 259 46-375 118-385 (390)
92 PF11700 ATG22: Vacuole efflux 99.6 7.9E-12 1.7E-16 121.5 33.5 323 2-387 100-473 (477)
93 PF06609 TRI12: Fungal trichot 99.6 1.7E-12 3.7E-17 127.4 28.4 106 1-106 106-211 (599)
94 TIGR01272 gluP glucose/galacto 99.6 3E-12 6.6E-17 118.4 28.0 274 22-364 6-298 (310)
95 TIGR00806 rfc RFC reduced fola 99.5 5.7E-13 1.2E-17 126.0 18.3 114 2-116 91-207 (511)
96 KOG2615 Permease of the major 99.5 1.2E-12 2.6E-17 118.4 19.2 86 1-86 96-181 (451)
97 TIGR00805 oat sodium-independe 99.5 1E-12 2.2E-17 132.7 18.1 114 1-114 96-283 (633)
98 COG0738 FucP Fucose permease [ 99.4 1.7E-10 3.6E-15 105.9 26.7 302 1-374 76-402 (422)
99 PRK09669 putative symporter Ya 99.4 1.2E-10 2.5E-15 113.7 27.3 106 251-356 274-388 (444)
100 TIGR00788 fbt folate/biopterin 99.4 9.9E-12 2.1E-16 121.6 19.8 305 2-358 94-415 (468)
101 TIGR01301 GPH_sucrose GPH fami 99.4 4.5E-10 9.7E-15 108.8 29.3 336 1-386 71-476 (477)
102 COG2807 CynX Cyanate permease 99.4 3.7E-10 8.1E-15 102.2 26.2 302 3-380 77-384 (395)
103 KOG3764 Vesicular amine transp 99.4 1E-11 2.2E-16 113.2 15.7 111 1-111 134-246 (464)
104 PRK11462 putative transporter; 99.4 5.3E-10 1.1E-14 109.4 28.4 105 2-106 79-198 (460)
105 PF13347 MFS_2: MFS/sugar tran 99.4 3.3E-10 7.2E-15 110.0 25.8 286 2-356 71-384 (428)
106 PRK10429 melibiose:sodium symp 99.4 6.1E-10 1.3E-14 109.5 26.8 108 249-356 274-393 (473)
107 PRK10642 proline/glycine betai 99.4 5.3E-12 1.2E-16 124.6 12.1 134 1-135 314-458 (490)
108 COG2270 Permeases of the major 99.3 1.9E-09 4.2E-14 99.7 26.1 322 1-388 87-435 (438)
109 PLN00028 nitrate transmembrane 99.3 1.6E-09 3.4E-14 106.6 23.5 181 192-384 33-222 (476)
110 COG2211 MelB Na+/melibiose sym 99.2 1E-08 2.2E-13 97.7 27.1 289 2-356 82-396 (467)
111 TIGR00880 2_A_01_02 Multidrug 99.2 3.1E-10 6.6E-15 91.5 14.5 133 252-384 9-141 (141)
112 PF03825 Nuc_H_symport: Nucleo 99.2 3.3E-08 7.2E-13 94.4 30.6 110 249-358 251-366 (400)
113 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.9E-09 4.1E-14 104.1 20.5 138 249-386 51-194 (412)
114 PRK11551 putative 3-hydroxyphe 99.2 1.9E-09 4.1E-14 103.9 19.7 140 246-385 55-194 (406)
115 TIGR00710 efflux_Bcr_CflA drug 99.2 1.7E-09 3.6E-14 103.2 19.0 143 245-387 44-186 (385)
116 PRK10473 multidrug efflux syst 99.2 1.7E-09 3.6E-14 103.8 18.9 141 247-387 44-184 (392)
117 TIGR00895 2A0115 benzoate tran 99.2 1E-09 2.2E-14 105.0 17.2 138 248-385 59-196 (398)
118 TIGR01299 synapt_SV2 synaptic 99.2 4.2E-09 9.1E-14 107.4 22.1 108 247-354 208-315 (742)
119 PRK15462 dipeptide/tripeptide 99.2 2.2E-09 4.7E-14 104.5 18.9 168 199-377 13-185 (493)
120 PRK11663 regulatory protein Uh 99.2 3.8E-09 8.2E-14 102.8 20.1 138 247-384 64-201 (434)
121 PRK10213 nepI ribonucleoside t 99.2 7.1E-09 1.5E-13 99.5 21.5 137 249-385 63-199 (394)
122 PF07690 MFS_1: Major Facilita 99.1 5E-09 1.1E-13 98.5 20.1 140 246-385 37-176 (352)
123 TIGR00891 2A0112 putative sial 99.1 4.9E-09 1.1E-13 100.6 20.0 181 193-385 10-192 (405)
124 TIGR00893 2A0114 d-galactonate 99.1 1.5E-09 3.2E-14 103.5 16.2 141 246-386 34-174 (399)
125 PRK10054 putative transporter; 99.1 4.5E-09 9.8E-14 100.9 19.0 135 249-384 51-185 (395)
126 PRK10504 putative transporter; 99.1 8.4E-09 1.8E-13 101.5 21.1 179 196-385 11-189 (471)
127 PRK03699 putative transporter; 99.1 1.4E-08 2.9E-13 97.6 22.0 130 249-378 50-180 (394)
128 PRK12307 putative sialic acid 99.1 7.3E-09 1.6E-13 100.4 20.3 118 248-365 60-177 (426)
129 PRK03893 putative sialic acid 99.1 7.6E-09 1.6E-13 102.4 20.5 164 191-365 16-179 (496)
130 PRK15462 dipeptide/tripeptide 99.1 2.7E-07 5.8E-12 90.1 30.5 105 1-105 74-182 (493)
131 PRK15402 multidrug efflux syst 99.1 6.7E-09 1.5E-13 100.1 19.5 139 248-386 55-193 (406)
132 TIGR00900 2A0121 H+ Antiporter 99.1 1.6E-08 3.6E-13 95.4 20.7 135 246-380 39-178 (365)
133 TIGR00711 efflux_EmrB drug res 99.1 5E-09 1.1E-13 103.3 17.6 140 247-386 43-182 (485)
134 PRK03545 putative arabinose tr 99.1 1.7E-08 3.7E-13 96.7 20.6 136 249-384 52-187 (390)
135 TIGR00880 2_A_01_02 Multidrug 99.1 1.3E-09 2.8E-14 87.8 10.8 114 1-114 26-141 (141)
136 PF01306 LacY_symp: LacY proto 99.1 3.9E-07 8.4E-12 86.1 28.7 142 250-391 268-410 (412)
137 PRK15403 multidrug efflux syst 99.1 1.2E-08 2.5E-13 98.6 19.3 136 251-386 61-196 (413)
138 PRK09848 glucuronide transport 99.1 2.5E-07 5.4E-12 90.4 28.5 105 252-356 275-388 (448)
139 TIGR00881 2A0104 phosphoglycer 99.1 2E-09 4.4E-14 102.1 13.0 139 247-385 36-175 (379)
140 TIGR00924 yjdL_sub1_fam amino 99.0 1.7E-08 3.6E-13 99.2 18.8 173 199-379 14-190 (475)
141 PRK11102 bicyclomycin/multidru 99.0 9.7E-09 2.1E-13 97.8 16.7 139 247-385 32-170 (377)
142 PRK14995 methyl viologen resis 99.0 4.4E-08 9.6E-13 96.9 21.4 136 251-386 51-187 (495)
143 PRK11273 glpT sn-glycerol-3-ph 99.0 2.8E-08 6.1E-13 97.2 19.3 138 248-385 70-212 (452)
144 TIGR00886 2A0108 nitrite extru 99.0 4.3E-08 9.4E-13 92.9 19.2 108 247-355 43-151 (366)
145 PRK10091 MFS transport protein 99.0 2.9E-08 6.2E-13 94.9 17.9 139 247-385 44-182 (382)
146 TIGR00712 glpT glycerol-3-phos 99.0 2.2E-08 4.8E-13 97.5 17.4 140 246-385 66-210 (438)
147 PRK11652 emrD multidrug resist 99.0 6.3E-08 1.4E-12 92.9 20.2 140 247-386 49-188 (394)
148 COG2271 UhpC Sugar phosphate p 99.0 1.3E-08 2.7E-13 94.3 13.6 143 242-384 65-209 (448)
149 TIGR00903 2A0129 major facilit 99.0 4.6E-08 9.9E-13 92.9 17.9 136 249-385 34-169 (368)
150 KOG4686 Predicted sugar transp 98.9 6E-08 1.3E-12 84.9 16.5 125 253-380 312-442 (459)
151 TIGR00890 2A0111 Oxalate/Forma 98.9 4.1E-08 8.9E-13 93.1 17.3 138 245-383 42-179 (377)
152 PRK09874 drug efflux system pr 98.9 7.9E-08 1.7E-12 92.6 19.5 135 249-384 62-196 (408)
153 KOG2563 Permease of the major 98.9 1E-07 2.2E-12 89.0 18.9 324 3-391 109-460 (480)
154 TIGR00887 2A0109 phosphate:H+ 98.9 9.6E-08 2.1E-12 94.8 20.3 108 246-353 61-174 (502)
155 PRK11646 multidrug resistance 98.9 1.2E-07 2.6E-12 91.2 20.1 133 251-384 56-188 (400)
156 PRK15034 nitrate/nitrite trans 98.9 3.2E-07 7E-12 88.5 22.3 141 243-384 72-235 (462)
157 PRK10207 dipeptide/tripeptide 98.9 6.1E-08 1.3E-12 95.4 17.8 174 196-380 15-192 (489)
158 cd06174 MFS The Major Facilita 98.9 8.6E-08 1.9E-12 89.8 17.5 133 247-379 40-172 (352)
159 PRK11043 putative transporter; 98.9 2E-07 4.4E-12 89.6 19.8 138 247-384 47-184 (401)
160 PRK11195 lysophospholipid tran 98.9 2.9E-07 6.3E-12 88.3 20.0 134 247-385 44-177 (393)
161 PRK10489 enterobactin exporter 98.8 1.7E-07 3.6E-12 90.7 17.7 138 246-384 57-199 (417)
162 TIGR00879 SP MFS transporter, 98.8 7E-08 1.5E-12 94.5 15.0 139 246-385 76-220 (481)
163 TIGR00894 2A0114euk Na(+)-depe 98.8 1E-07 2.2E-12 93.6 15.8 136 249-384 84-222 (465)
164 PRK09584 tppB putative tripept 98.8 2.9E-07 6.3E-12 91.0 18.7 117 258-374 74-194 (500)
165 TIGR00892 2A0113 monocarboxyla 98.8 2.7E-07 5.8E-12 90.4 18.2 130 252-382 65-195 (455)
166 PRK10077 xylE D-xylose transpo 98.8 1.7E-07 3.7E-12 92.4 16.5 138 247-385 61-218 (479)
167 PRK10406 alpha-ketoglutarate t 98.8 7.6E-07 1.7E-11 86.6 20.5 134 251-385 73-222 (432)
168 PRK09556 uhpT sugar phosphate 98.8 1.1E-07 2.3E-12 93.6 14.4 134 248-381 71-212 (467)
169 PRK15075 citrate-proton sympor 98.8 6.5E-07 1.4E-11 87.1 19.4 99 254-352 69-175 (434)
170 TIGR00898 2A0119 cation transp 98.8 1.3E-07 2.8E-12 93.9 14.5 134 247-384 133-266 (505)
171 TIGR00897 2A0118 polyol permea 98.8 4.6E-07 1E-11 87.2 17.9 112 247-358 54-170 (402)
172 PF05977 MFS_3: Transmembrane 98.8 1.2E-06 2.5E-11 86.6 20.4 137 248-384 52-193 (524)
173 TIGR00885 fucP L-fucose:H+ sym 98.8 1E-06 2.3E-11 84.9 19.8 110 245-354 42-154 (410)
174 PRK03633 putative MFS family t 98.7 1.1E-06 2.5E-11 83.8 19.6 111 245-355 45-155 (381)
175 KOG0255 Synaptic vesicle trans 98.7 2.4E-07 5.1E-12 92.4 15.1 131 251-385 128-258 (521)
176 PRK05122 major facilitator sup 98.7 9.9E-07 2.1E-11 84.8 18.2 124 246-369 56-187 (399)
177 COG2814 AraJ Arabinose efflux 98.7 2.2E-06 4.8E-11 80.2 19.6 137 246-382 53-189 (394)
178 PRK09952 shikimate transporter 98.7 1.8E-06 3.9E-11 84.1 19.6 133 252-385 75-223 (438)
179 PRK09705 cynX putative cyanate 98.7 1.1E-06 2.4E-11 84.4 17.5 127 248-375 51-178 (393)
180 TIGR00899 2A0120 sugar efflux 98.7 1.9E-06 4.2E-11 81.8 18.9 135 251-385 43-180 (375)
181 PF01770 Folate_carrier: Reduc 98.6 1.4E-05 2.9E-10 75.4 23.0 114 3-116 71-186 (412)
182 PF03092 BT1: BT1 family; Int 98.6 1.2E-05 2.6E-10 78.0 23.4 112 2-113 57-177 (433)
183 PRK08633 2-acyl-glycerophospho 98.6 2.8E-06 6.1E-11 92.9 21.1 108 249-356 55-165 (1146)
184 COG2223 NarK Nitrate/nitrite t 98.6 3.4E-06 7.4E-11 78.4 17.9 141 241-383 49-195 (417)
185 PRK10133 L-fucose transporter; 98.6 6.2E-06 1.3E-10 80.3 21.0 147 196-353 27-176 (438)
186 PRK12382 putative transporter; 98.6 2.5E-06 5.3E-11 81.8 17.8 112 247-358 57-176 (392)
187 PRK06814 acylglycerophosphoeth 98.6 4.3E-06 9.3E-11 91.4 21.2 135 250-385 61-198 (1140)
188 KOG2615 Permease of the major 98.6 2.9E-07 6.3E-12 84.1 9.8 103 252-355 79-181 (451)
189 PRK09528 lacY galactoside perm 98.6 6.2E-06 1.4E-10 79.9 19.7 139 245-384 50-194 (420)
190 PF06609 TRI12: Fungal trichot 98.6 2.3E-06 5.1E-11 84.6 16.5 126 246-373 83-209 (599)
191 TIGR00889 2A0110 nucleoside tr 98.6 3.5E-07 7.6E-12 88.5 10.4 114 1-114 279-405 (418)
192 KOG3764 Vesicular amine transp 98.6 2.7E-07 5.8E-12 84.8 8.8 141 248-388 113-254 (464)
193 TIGR00883 2A0106 metabolite-pr 98.6 1.7E-06 3.7E-11 82.5 14.9 101 253-353 47-155 (394)
194 TIGR00896 CynX cyanate transpo 98.5 4.2E-06 9.2E-11 79.0 16.8 124 247-372 41-166 (355)
195 PRK11010 ampG muropeptide tran 98.5 1E-05 2.2E-10 80.1 19.9 129 256-385 60-198 (491)
196 KOG2325 Predicted transporter/ 98.5 3.7E-06 7.9E-11 80.7 15.3 114 3-116 102-234 (488)
197 PTZ00207 hypothetical protein; 98.5 1.8E-05 4E-10 78.8 20.5 123 257-381 77-205 (591)
198 PRK15011 sugar efflux transpor 98.5 3.8E-05 8.2E-10 73.7 22.1 132 253-385 64-198 (393)
199 TIGR00901 2A0125 AmpG-related 98.5 6.7E-06 1.5E-10 77.7 16.4 128 258-385 38-182 (356)
200 TIGR01301 GPH_sucrose GPH fami 98.5 2.1E-05 4.6E-10 76.6 19.8 139 247-385 45-222 (477)
201 TIGR00806 rfc RFC reduced fola 98.4 3.2E-05 6.9E-10 74.1 19.7 129 251-381 72-203 (511)
202 TIGR00882 2A0105 oligosacchari 98.4 2.7E-05 5.9E-10 74.8 19.3 138 244-384 41-186 (396)
203 KOG1330 Sugar transporter/spin 98.4 3.7E-07 8.1E-12 85.6 5.7 137 251-388 78-216 (493)
204 COG3104 PTR2 Dipeptide/tripept 98.4 5.6E-05 1.2E-09 72.2 19.9 111 1-111 90-205 (498)
205 KOG0254 Predicted transporter 98.4 1.1E-05 2.4E-10 80.2 15.3 138 245-385 93-233 (513)
206 COG3104 PTR2 Dipeptide/tripept 98.4 1E-05 2.2E-10 77.1 13.9 142 247-391 68-216 (498)
207 KOG0569 Permease of the major 98.3 2E-05 4.2E-10 76.2 15.6 132 251-385 70-208 (485)
208 KOG2816 Predicted transporter 98.3 0.00043 9.2E-09 67.2 24.4 111 1-116 90-204 (463)
209 PRK11902 ampG muropeptide tran 98.3 0.00013 2.8E-09 70.3 19.9 130 255-385 46-185 (402)
210 TIGR00805 oat sodium-independe 98.2 2E-05 4.2E-10 80.2 13.0 131 251-381 78-281 (633)
211 KOG2532 Permease of the major 98.1 4.2E-05 9.1E-10 74.4 13.1 131 251-381 83-216 (466)
212 TIGR00792 gph sugar (Glycoside 98.1 0.00017 3.6E-09 70.1 16.4 138 248-385 42-198 (437)
213 TIGR00902 2A0127 phenyl propri 98.0 0.00057 1.2E-08 65.3 18.6 119 249-369 47-167 (382)
214 PF03137 OATP: Organic Anion T 98.0 1.5E-06 3.2E-11 86.1 0.0 89 26-114 141-252 (539)
215 KOG2504 Monocarboxylate transp 98.0 0.00013 2.9E-09 71.9 13.4 130 251-382 91-222 (509)
216 KOG2816 Predicted transporter 97.9 0.00015 3.2E-09 70.4 12.9 138 251-391 72-209 (463)
217 COG0738 FucP Fucose permease [ 97.9 0.0016 3.5E-08 60.7 18.6 140 247-386 54-216 (422)
218 PF02487 CLN3: CLN3 protein; 97.9 0.0096 2.1E-07 56.4 24.2 103 7-114 93-198 (402)
219 TIGR02718 sider_RhtX_FptX side 97.9 0.0013 2.8E-08 63.0 18.5 126 259-384 57-187 (390)
220 KOG2533 Permease of the major 97.8 0.00017 3.7E-09 70.5 11.7 139 248-386 88-232 (495)
221 PRK11128 putative 3-phenylprop 97.8 0.0016 3.4E-08 62.3 18.2 136 246-384 44-181 (382)
222 PF03209 PUCC: PUCC protein; 97.8 0.03 6.5E-07 52.7 30.8 72 29-100 92-165 (403)
223 PF06813 Nodulin-like: Nodulin 97.8 0.00075 1.6E-08 59.8 14.2 107 247-355 43-156 (250)
224 PF00083 Sugar_tr: Sugar (and 97.8 7.4E-07 1.6E-11 87.1 -5.8 104 247-350 52-158 (451)
225 KOG3098 Uncharacterized conser 97.7 0.021 4.6E-07 55.1 23.7 61 23-83 99-160 (461)
226 PRK09669 putative symporter Ya 97.7 0.00056 1.2E-08 66.8 13.1 135 249-383 53-206 (444)
227 TIGR00788 fbt folate/biopterin 97.7 0.0027 5.9E-08 62.4 17.7 131 252-385 72-212 (468)
228 KOG3626 Organic anion transpor 97.6 0.002 4.3E-08 65.0 15.9 90 27-116 238-347 (735)
229 KOG3810 Micronutrient transpor 97.5 0.00063 1.4E-08 61.9 9.3 104 13-116 82-187 (433)
230 PF01306 LacY_symp: LacY proto 97.5 0.0052 1.1E-07 58.5 16.1 137 244-384 46-191 (412)
231 KOG0252 Inorganic phosphate tr 97.5 0.0007 1.5E-08 64.0 9.9 95 247-341 90-191 (538)
232 PF13347 MFS_2: MFS/sugar tran 97.5 0.00081 1.8E-08 65.3 10.7 131 253-383 49-200 (428)
233 PRK11462 putative transporter; 97.5 0.0072 1.6E-07 59.3 17.4 132 252-383 56-206 (460)
234 PF05631 DUF791: Protein of un 97.4 0.018 4E-07 53.2 18.0 133 254-387 82-222 (354)
235 PRK10429 melibiose:sodium symp 97.4 0.0052 1.1E-07 60.6 15.7 104 250-353 51-166 (473)
236 KOG3762 Predicted transporter 97.4 0.0026 5.6E-08 61.4 12.1 131 248-378 413-544 (618)
237 COG0477 ProP Permeases of the 97.3 0.0026 5.6E-08 57.6 10.6 103 1-103 67-176 (338)
238 PF11700 ATG22: Vacuole efflux 97.1 0.0044 9.5E-08 60.8 11.4 110 4-113 350-469 (477)
239 PF05631 DUF791: Protein of un 97.1 0.075 1.6E-06 49.2 18.2 114 1-115 97-220 (354)
240 COG2211 MelB Na+/melibiose sym 97.1 0.016 3.6E-07 55.9 14.4 139 254-392 61-215 (467)
241 KOG0253 Synaptic vesicle trans 97.0 0.001 2.2E-08 61.2 4.6 109 1-114 409-521 (528)
242 PF03825 Nuc_H_symport: Nucleo 96.9 0.11 2.4E-06 49.9 18.7 46 243-288 39-85 (400)
243 TIGR00769 AAA ADP/ATP carrier 96.9 0.3 6.5E-06 47.8 21.1 41 314-354 149-189 (472)
244 PRK09848 glucuronide transport 96.9 0.0062 1.4E-07 59.5 9.7 84 1-84 292-385 (448)
245 PF03092 BT1: BT1 family; Int 96.8 0.013 2.9E-07 56.9 11.2 132 258-390 41-184 (433)
246 KOG2325 Predicted transporter/ 96.7 0.077 1.7E-06 51.5 15.0 139 246-385 76-233 (488)
247 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.12 2.5E-06 52.9 16.9 123 256-378 38-179 (654)
248 PF06963 FPN1: Ferroportin1 (F 96.6 0.79 1.7E-05 44.3 22.8 100 247-346 299-408 (432)
249 KOG2563 Permease of the major 96.5 0.094 2E-06 49.9 14.0 105 251-355 89-201 (480)
250 PF00854 PTR2: POT family; In 96.4 0.019 4E-07 54.7 9.0 106 4-109 2-120 (372)
251 KOG3762 Predicted transporter 96.0 0.029 6.3E-07 54.5 8.0 106 4-109 437-544 (618)
252 PF03209 PUCC: PUCC protein; 95.7 0.19 4.2E-06 47.4 12.2 80 311-390 106-187 (403)
253 PF07672 MFS_Mycoplasma: Mycop 95.6 0.68 1.5E-05 41.0 14.2 55 57-111 2-61 (267)
254 TIGR00926 2A1704 Peptide:H+ sy 95.5 3.6 7.8E-05 42.3 23.1 108 1-108 52-178 (654)
255 PF06813 Nodulin-like: Nodulin 95.4 0.27 5.9E-06 43.7 11.5 111 4-115 67-185 (250)
256 TIGR01272 gluP glucose/galacto 94.9 0.25 5.4E-06 45.7 10.2 75 312-386 28-119 (310)
257 PF05978 UNC-93: Ion channel r 94.6 0.19 4.2E-06 41.1 7.7 82 2-84 66-148 (156)
258 COG0477 ProP Permeases of the 94.5 1.4 3.1E-05 39.3 14.2 103 252-354 50-156 (338)
259 PF05978 UNC-93: Ion channel r 94.4 1.7 3.6E-05 35.6 12.7 98 251-349 47-144 (156)
260 COG2270 Permeases of the major 94.2 0.25 5.5E-06 46.8 8.3 112 3-114 318-431 (438)
261 PF01770 Folate_carrier: Reduc 93.9 4.8 0.0001 38.6 16.4 126 259-385 59-186 (412)
262 PF12832 MFS_1_like: MFS_1 lik 91.3 3.3 7.1E-05 29.3 8.9 36 243-278 37-72 (77)
263 PF02487 CLN3: CLN3 protein; 89.7 1.4 3.1E-05 42.0 7.7 64 21-84 330-394 (402)
264 PF03219 TLC: TLC ATP/ADP tran 87.8 30 0.00066 34.2 17.2 37 50-86 169-205 (491)
265 PF00854 PTR2: POT family; In 87.6 3.3 7.1E-05 39.3 8.8 66 313-378 52-120 (372)
266 COG2807 CynX Cyanate permease 86.6 29 0.00063 32.7 16.1 128 249-378 55-183 (395)
267 KOG4332 Predicted sugar transp 85.9 26 0.00057 31.6 14.7 53 1-54 100-154 (454)
268 PF03219 TLC: TLC ATP/ADP tran 84.2 46 0.001 32.9 20.2 42 314-355 164-205 (491)
269 KOG1237 H+/oligopeptide sympor 83.8 53 0.0011 33.3 23.7 119 1-121 102-252 (571)
270 KOG0637 Sucrose transporter an 83.1 21 0.00046 34.6 11.5 88 1-92 99-206 (498)
271 TIGR00769 AAA ADP/ATP carrier 82.1 55 0.0012 32.3 25.1 37 49-85 153-189 (472)
272 KOG4686 Predicted sugar transp 79.5 13 0.00028 33.9 8.2 79 26-104 352-435 (459)
273 PF01733 Nucleoside_tran: Nucl 78.4 0.76 1.6E-05 42.5 0.4 41 308-348 261-302 (309)
274 KOG3880 Predicted small molecu 78.2 57 0.0012 30.1 12.6 99 10-113 99-201 (409)
275 TIGR00939 2a57 Equilibrative N 76.9 77 0.0017 30.9 25.2 42 308-349 385-427 (437)
276 PF06779 DUF1228: Protein of u 76.6 17 0.00037 26.2 6.8 48 245-292 31-78 (85)
277 PF13000 Acatn: Acetyl-coenzym 73.3 46 0.001 32.8 10.8 22 363-384 203-224 (544)
278 COG3202 ATP/ADP translocase [E 72.9 1E+02 0.0022 30.4 19.4 35 51-85 174-208 (509)
279 PF06963 FPN1: Ferroportin1 (F 72.5 98 0.0021 30.1 15.7 55 325-379 144-198 (432)
280 KOG3880 Predicted small molecu 71.0 13 0.00029 34.0 6.2 75 10-84 326-401 (409)
281 PRK10697 DNA-binding transcrip 68.4 16 0.00035 28.2 5.4 49 87-135 33-87 (118)
282 KOG3098 Uncharacterized conser 68.0 64 0.0014 31.6 10.6 100 249-349 58-157 (461)
283 KOG4332 Predicted sugar transp 66.5 13 0.00028 33.4 5.1 17 260-276 91-107 (454)
284 TIGR02978 phageshock_pspC phag 62.0 33 0.00071 26.7 6.1 33 86-118 27-65 (121)
285 PF06341 DUF1056: Protein of u 56.9 16 0.00034 24.5 3.0 40 21-60 23-62 (63)
286 KOG3574 Acetyl-CoA transporter 56.0 75 0.0016 30.4 8.2 223 164-403 1-258 (510)
287 PF01528 Herpes_glycop: Herpes 52.8 52 0.0011 31.1 6.9 46 50-95 259-306 (374)
288 COG5336 Uncharacterized protei 51.7 60 0.0013 24.5 5.6 52 325-376 37-90 (116)
289 PF13000 Acatn: Acetyl-coenzym 49.2 2.8E+02 0.0062 27.6 22.8 34 48-81 141-174 (544)
290 PRK03612 spermidine synthase; 48.2 3E+02 0.0065 27.6 18.6 26 329-354 144-169 (521)
291 KOG3626 Organic anion transpor 46.0 92 0.002 32.4 7.9 43 314-356 606-649 (735)
292 PF04024 PspC: PspC domain; I 43.4 40 0.00086 22.6 3.4 30 86-115 27-60 (61)
293 KOG0637 Sucrose transporter an 37.7 30 0.00064 33.7 2.9 37 310-346 158-195 (498)
294 PF11947 DUF3464: Protein of u 37.4 2.2E+02 0.0047 23.2 7.3 81 263-343 56-143 (153)
295 PRK03612 spermidine synthase; 33.5 3.7E+02 0.008 27.0 10.0 46 59-104 143-190 (521)
296 KOG2881 Predicted membrane pro 32.7 3.7E+02 0.0079 24.1 11.3 30 254-283 253-282 (294)
297 TIGR00939 2a57 Equilibrative N 30.4 79 0.0017 30.8 4.6 61 24-84 370-431 (437)
298 PF11151 DUF2929: Protein of u 29.1 1.7E+02 0.0037 19.2 6.6 45 71-115 12-56 (57)
299 COG5336 Uncharacterized protei 27.9 1.4E+02 0.003 22.6 4.4 20 259-278 60-80 (116)
300 PF01914 MarC: MarC family int 27.1 4E+02 0.0087 22.8 8.3 43 362-404 71-113 (203)
301 PHA03237 envelope glycoprotein 26.7 4.4E+02 0.0095 25.5 8.6 34 50-83 276-310 (424)
302 PF10183 ESSS: ESSS subunit of 26.6 1.1E+02 0.0023 23.1 3.8 30 87-116 56-86 (105)
303 COG1575 MenA 1,4-dihydroxy-2-n 25.2 5.4E+02 0.012 23.7 12.3 82 314-405 133-214 (303)
304 TIGR01667 YCCS_YHJK integral m 24.6 4.7E+02 0.01 27.4 9.1 41 1-41 55-96 (701)
305 KOG1479 Nucleoside transporter 24.4 6.5E+02 0.014 24.3 14.8 38 304-341 352-390 (406)
306 PF01733 Nucleoside_tran: Nucl 24.0 29 0.00064 31.9 0.4 62 23-84 245-307 (309)
307 PF06779 DUF1228: Protein of u 23.7 2.9E+02 0.0062 19.9 6.2 40 63-102 29-68 (85)
308 PF04281 Tom22: Mitochondrial 23.5 2.1E+02 0.0046 22.8 5.0 22 50-71 60-81 (137)
309 PF13428 TPR_14: Tetratricopep 23.0 98 0.0021 18.6 2.5 22 117-138 10-31 (44)
310 KOG2765 Predicted membrane pro 22.8 4.1E+02 0.0088 25.3 7.3 14 84-97 36-49 (416)
311 PF01350 Flavi_NS4A: Flaviviru 22.2 2.3E+02 0.005 22.8 4.9 28 364-391 99-127 (144)
312 KOG2513 Protein required for m 21.5 3E+02 0.0065 27.9 6.6 28 105-132 587-616 (647)
313 PF12854 PPR_1: PPR repeat 21.5 62 0.0014 18.4 1.3 16 119-134 18-33 (34)
314 PRK14229 camphor resistance pr 21.3 3.2E+02 0.0068 20.7 5.5 24 32-55 55-79 (108)
315 PHA03242 envelope glycoprotein 20.9 4.6E+02 0.01 25.4 7.5 33 50-82 273-306 (428)
316 TIGR00986 3a0801s05tom22 mitoc 20.8 2.4E+02 0.0052 22.6 4.7 22 50-71 58-79 (145)
317 COG3202 ATP/ADP translocase [E 20.2 8.7E+02 0.019 24.2 19.9 42 314-355 168-209 (509)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-51 Score=363.72 Aligned_cols=378 Identities=38% Similarity=0.612 Sum_probs=315.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
|||+.+..+.+...+...+.+.++|+..+.++|.+.|+|.|+.++..++..|+.|..+|+..+-.. .+|.+|.+....+
T Consensus 141 grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~l 219 (528)
T KOG0253|consen 141 GRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALL 219 (528)
T ss_pred hcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999999888888899999999999988777 9999999999999
Q ss_pred hHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccc
Q 015488 81 AWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFS 160 (406)
Q Consensus 81 ~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
++..+...||||.......|..++..+.+++||||||++.||+.+||.+.++|++++|+...|...+....+++.+++..
T Consensus 220 aw~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~ 299 (528)
T KOG0253|consen 220 AWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEES 299 (528)
T ss_pred HHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh
Confidence 99999999999998888899999888999999999999999999999999999999999888766554433333322211
Q ss_pred cCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc------cc
Q 015488 161 TSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI------LL 234 (406)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~ 234 (406)
+.++ .+.+..|+......++++|+++|+++++|.+|++|.+.|||..+++..+......|.... ..
T Consensus 300 ~~~~--------~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e 371 (528)
T KOG0253|consen 300 DLDD--------SKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELE 371 (528)
T ss_pred chhh--------hhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHH
Confidence 1111 011112223335668899999999999999999999999999998887765433222111 11
Q ss_pred c---cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015488 235 S---ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 311 (406)
Q Consensus 235 ~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (406)
. -......-|.+.++.++.++||.++.++++||+|||+.+..+++++++++++.....+.....++++...+|+.+.
T Consensus 372 ~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~ 451 (528)
T KOG0253|consen 372 TRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGA 451 (528)
T ss_pred hhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhch
Confidence 1 0112234588999999999999999999999999999999999999999887776555555666777888889999
Q ss_pred hhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccc
Q 015488 312 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 389 (406)
Q Consensus 312 ~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 389 (406)
+...|+|++|.|||.+|++|+|.+++.+|+|++++|++. +........+..+++.++++++++..++|-|||||.+
T Consensus 452 fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 452 FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999999999999999997 4444455678899999999999999999999999975
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-42 Score=323.38 Aligned_cols=359 Identities=22% Similarity=0.340 Sum_probs=267.9
Q ss_pred CcchhhHHHHHHHHHHHHHHh---hcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSA---FSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~---~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
|||+++.++.++..+++.++. .++++++++++|++.|+..|... ....|+.|++|++.||....+.+.+..+|.++
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 799999999999988887665 55789999999999999998875 45668999999999999999999999999999
Q ss_pred HHHhhH--HhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhc-cCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 77 EAALAW--IVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCT-KGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 77 ~~~l~~--~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
+..++. .+++...|++++....+|+++.++...++|||||||.. |||.+||++.+++++..++++.
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~----------- 236 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEA----------- 236 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchh-----------
Confidence 977664 35677789999999999999999999999999999998 8999999999999986443211
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHH------HHHHHHHHHHHHHhhhccCC
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFG------NSFVYYGIVLLASELSGSQS 226 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~ 226 (406)
+.+++.++.+++ +. .+.+..++.+++ ++++|+...+...+.+. +...+|+..++... +
T Consensus 237 ~~e~~~~e~~~~--------~~--~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a-----G 301 (485)
T KOG0569|consen 237 EIEEMLREIEEE--------EL--EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA-----G 301 (485)
T ss_pred HHHHHHHHHHHh--------cc--ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc-----C
Confidence 000000000000 00 001112344555 45666665554444443 33456666655421 0
Q ss_pred CCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhh---hHHH---
Q 015488 227 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQS---NILL--- 297 (406)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~---~~~~--- 297 (406)
-..+...+ .....+.+.++.++++.++.||.|||++++.+...+.++.+.+.. ..+ .+..
T Consensus 302 ----------~~~~~a~~-an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 302 ----------FTPEEAQY-ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred ----------CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 01112233 344556788999999999999999999999988877766554432 111 1111
Q ss_pred -HHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHH
Q 015488 298 -TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 376 (406)
Q Consensus 298 -~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 376 (406)
...+.....+..|+.++.|.+.+|++|++.|+.+.++...+.|+.+++..+.++++.+..+. ..|+++.+.+++..++
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~ 449 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIY 449 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHH
Confidence 12222333456788899999999999999999999999999999999999999988877765 5688999999999999
Q ss_pred HHhcccccCCccccccccccc
Q 015488 377 ILLIPFETKGKELVNTIDGVS 397 (406)
Q Consensus 377 ~~~~~~et~~~~~~~~~~~~~ 397 (406)
.+++.||||||+.+|+.++.+
T Consensus 450 ~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 450 LYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHhCcccCCCCHHHHHHHHH
Confidence 999999999999999988744
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.8e-41 Score=341.12 Aligned_cols=387 Identities=25% Similarity=0.412 Sum_probs=276.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||+.+++++++..++++++++++++..++++|++.|++.|+. ++...++.|++|+++||+..++++.++.+|.++++.
T Consensus 230 GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 230 GRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999875 456778999999999999999999999999999998
Q ss_pred hhHHhcc-------------cchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCC--
Q 015488 80 LAWIVMP-------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS-- 144 (406)
Q Consensus 80 l~~~~~~-------------~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~-- 144 (406)
+++.+.+ ..+||+++++.++|.++.++.++++||||+|+..++|.+||.+.++++++.|.+....
T Consensus 310 la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~ 389 (742)
T TIGR01299 310 MAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPE 389 (742)
T ss_pred HHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchh
Confidence 8766543 2479999999999998888888899999999999999999999999998876542110
Q ss_pred CCCcCC-CCCC-cccccccCCccc---cchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015488 145 GNLTSD-GTND-LDEEFSTSEETP---LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAS 219 (406)
Q Consensus 145 ~~~~~~-~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (406)
.....+ .+.. ..++..+.++.. ..+...+........+.++..+++++++++++++|+.|++..+.||++..|.|
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P 469 (742)
T TIGR01299 390 KVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFP 469 (742)
T ss_pred HHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0000 000000000000 00000000000011122456788999999999999999999999999999998
Q ss_pred hhhccCC--------------------------------------------------------CCCccccccc-------
Q 015488 220 ELSGSQS--------------------------------------------------------KCSSSILLSE------- 236 (406)
Q Consensus 220 ~l~~~~~--------------------------------------------------------~~~~~~~~~~------- 236 (406)
.+....+ .|........
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 549 (742)
T TIGR01299 470 DMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNC 549 (742)
T ss_pred HHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhcc
Confidence 6621100 0000000000
Q ss_pred ----------------------------C-------------ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 015488 237 ----------------------------N-------------VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT 275 (406)
Q Consensus 237 ----------------------------~-------------~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~ 275 (406)
. ......+...++.+++.++|.+++++++||+|||++++
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~ 629 (742)
T TIGR01299 550 TFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLA 629 (742)
T ss_pred chhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 0 00012455667777899999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 276 IMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
.+.++.+++.+.+....+.....++..+..++..+.++..+.+++|++|++.|++++|+.++.+++|++++|++.+.+.+
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777665544433222222222233344455677888999999999999999999999999999999999887765
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhcccccCCccc
Q 015488 356 SCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 389 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 389 (406)
. +...++++++++.++++++.+++ |||+++.+
T Consensus 710 ~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 710 I-TKAAPILFASAALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred h-hhHHHHHHHHHHHHHHHHHHHhC-CCCccccc
Confidence 4 34567778888888877777665 79999865
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.9e-39 Score=319.26 Aligned_cols=368 Identities=22% Similarity=0.300 Sum_probs=247.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 73 (406)
|||+.+..+.++..+++++++++++ +..++++|+++|++.|.. +....+++|++|+++||+.+++.+.+..+|
T Consensus 84 Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g 163 (502)
T TIGR00887 84 GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFG 163 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence 6999999999999999999998876 789999999999999986 456778999999999999999999999999
Q ss_pred HHHHHHhhHHhcc-----------------------cchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChh-hHHH
Q 015488 74 SVSEAALAWIVMP-----------------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRIT-DAHN 129 (406)
Q Consensus 74 ~~l~~~l~~~~~~-----------------------~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~-~a~~ 129 (406)
.++++.++..+.. .++||++|.++++|+++.++.++++||||||+..|+|.| ++++
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~ 243 (502)
T TIGR00887 164 ILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAAS 243 (502)
T ss_pred HHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHH
Confidence 9999888765421 247999999999999988888889999999999998875 4666
Q ss_pred HHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccC----hhhHHHHHHHHHHHH
Q 015488 130 ILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS----PRFFKTTILLWVLYF 205 (406)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 205 (406)
.++++.+.+..+ + .++.++.++ +++ . .+. +++++++ +++++.++.++..++
T Consensus 244 ~~~~~~~~~~~~---~------~~~~~~~~~-~~~----------~--~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (502)
T TIGR00887 244 DMSAVLQVKIEA---E------PDEVEKAST-AVE----------V--PKA---SWSDFFTHFFKWRHGKHLLGTAGSWF 298 (502)
T ss_pred HHHHHhcccccc---C------cccccchhc-ccc----------c--hhh---hHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 666654321110 0 000000000 000 0 000 1223332 233344444555566
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccc-cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 015488 206 GNSFVYYGIVLLASELSGSQSKCSSSILLS-ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIF 284 (406)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~ 284 (406)
.+.+.+|+...+.|.+....+......... ....-.....+..+..++.+++.+++++++||+|||+.++.+..+.+++
T Consensus 299 ~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~ 378 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVL 378 (502)
T ss_pred HHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHH
Confidence 667778887666655432211110000000 0000001111233444567789999999999999999988776665554
Q ss_pred HHHHHhhh---h-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc---
Q 015488 285 LLPLVTLQ---S-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--- 357 (406)
Q Consensus 285 ~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~--- 357 (406)
+..+.... + ............++..+..+..+.+++|++|++.|+++.|+.+++++++++++|++.+++.+..
T Consensus 379 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~ 458 (502)
T TIGR00887 379 FFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPT 458 (502)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccc
Confidence 43332211 1 1111111112222234556678889999999999999999999999999999999998887642
Q ss_pred -------hhhHHHHHHHHHHHHHHHHHHhcccccCCcccccccc
Q 015488 358 -------HQTAAILLLEALIVLSVVVILLIPFETKGKELVNTID 394 (406)
Q Consensus 358 -------~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~ 394 (406)
+....+++++++++++++.. ++.||||+++++|+.+
T Consensus 459 ~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 459 KGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 22346788888888876654 5668999999998754
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.4e-36 Score=300.80 Aligned_cols=347 Identities=33% Similarity=0.589 Sum_probs=262.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||+.++++.++..++++++++++|++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+.++.+|.++++.
T Consensus 155 Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~ 234 (505)
T TIGR00898 155 GRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPL 234 (505)
T ss_pred cchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999885 456778899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+++.+. +||+.+++.++|.++..+..+++||||+|+..++|.+++.+.+++..+.|+.+.+++. .+.
T Consensus 235 ~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~---------~~~- 301 (505)
T TIGR00898 235 VAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEV---------LSL- 301 (505)
T ss_pred HHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHH---------Hhh-
Confidence 887764 4999999999998887777788999999999999999999999999887754321100 000
Q ss_pred ccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+.+++. ++ .++ .....+++ +++.++.++..+..++...+.+|+...+.+.+.
T Consensus 302 -~~~~~~------~~---~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 354 (505)
T TIGR00898 302 -SLEKDL------SS---SKK-QYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------------- 354 (505)
T ss_pred -hhhhhh------hh---ccC-CCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC----------------
Confidence 000000 00 000 01233444 566777777777777777788887766544321
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILLTALLSGARMFSMGTFIIAN 316 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
.+.+...++.++..+++.++++++.||+|||+.+..+.++.+++.+.+....+. ...........++..+.++..+
T Consensus 355 --~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (505)
T TIGR00898 355 --GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY 432 (505)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 123555666778889999999999999999999988877766655544432221 2222233333344455667788
Q ss_pred hhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 015488 317 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 392 (406)
Q Consensus 317 ~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~ 392 (406)
.+.+|++|++.|+++.|+.++++++|++++|++.+ +.+ .+...++.+++++++++++..+++ |||++++++|+
T Consensus 433 ~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l-pet~~~~l~~t 505 (505)
T TIGR00898 433 LYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGILTLFL-PETKGVPLPET 505 (505)
T ss_pred HHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHHHHcC-cCCCCCCCCCC
Confidence 99999999999999999999999999999999887 433 345567888888888887776554 69999999874
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=6.1e-35 Score=288.67 Aligned_cols=359 Identities=24% Similarity=0.368 Sum_probs=254.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||++++++.+++.++++++++++|+.+++++|+++|+|.|... +...|.+|++|++.||...+..+..+.+|.+++..
T Consensus 117 GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~ 196 (513)
T KOG0254|consen 117 GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYC 196 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999875 55678999999999999999999999999999977
Q ss_pred hhHHhccc-chhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~-~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
+.+...+. ++||+++++..+|+++..+..+++||||+||.++||.+++++.+++++..++.+ .+.+.++.
T Consensus 197 ~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~---------~~~~~~~~ 267 (513)
T KOG0254|consen 197 INYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED---------VEVELELL 267 (513)
T ss_pred HhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc---------hHHHHHHH
Confidence 77665433 589999999999999987778899999999999999999999999997632111 00011110
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHH------HHHHHHHHHHHhhhccCCCCCccc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNS------FVYYGIVLLASELSGSQSKCSSSI 232 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~ 232 (406)
. . ....... ..+.+ ..+.+++.|+.+++..+...+...+. ..||+..++.. .
T Consensus 268 ~----~-~~~~~~~----~~~~~-~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-----~------- 325 (513)
T KOG0254|consen 268 K----I-KLLVEAE----VAEGK-ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-----A------- 325 (513)
T ss_pred H----H-HHHHhhh----ccccc-ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-----c-------
Confidence 0 0 0000000 00000 02334555666776665444433322 23344433221 1
Q ss_pred ccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hh-h--------hHHHH-H
Q 015488 233 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQ-S--------NILLT-A 299 (406)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~-~--------~~~~~-~ 299 (406)
...+ +.....++.++..+++++++.++.||+|||+.++.+.....++++.+.. .. . .+... .
T Consensus 326 ----g~~~-~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
T KOG0254|consen 326 ----GLKS-DTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVF 400 (513)
T ss_pred ----CCCC-chHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHH
Confidence 1111 1144556667778889999999999999999999877766655443321 11 0 11111 1
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHH-HHH
Q 015488 300 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV-VIL 378 (406)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~ 378 (406)
.+.....+..+..+++|.+.+|+||.+.|+++.+++..++|..+++....++.+....+....|.+++..+.+... .++
T Consensus 401 ~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~ 480 (513)
T KOG0254|consen 401 LCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVF 480 (513)
T ss_pred HHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhe
Confidence 1222333455667889999999999999999999999999998887777766555543224567777777777777 788
Q ss_pred hcccccCCccccccccc
Q 015488 379 LIPFETKGKELVNTIDG 395 (406)
Q Consensus 379 ~~~~et~~~~~~~~~~~ 395 (406)
++.|||||++++|+.+.
T Consensus 481 ~~~pETkg~sleei~~~ 497 (513)
T KOG0254|consen 481 FFVPETKGLTLEEINEL 497 (513)
T ss_pred EEcccCCCCcHHHHHHH
Confidence 88999999999998774
No 7
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=286.84 Aligned_cols=359 Identities=32% Similarity=0.467 Sum_probs=269.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||++++.+.++.+++++++++++|++.+++.|+++|++.++. .+...+++|+.++++|+..+++...++..|.+..+.
T Consensus 146 GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~ 225 (521)
T KOG0255|consen 146 GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAG 225 (521)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999998775 466778899999999999999966666666666666
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
.+++. .+||+.+++..+|+++.++.+++.||||||+..+||.|+|.+.+++..+.|+.+....+. .++..
T Consensus 226 ~a~~~---~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~-------~~~~~ 295 (521)
T KOG0255|consen 226 AAYIT---RDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKEL-------LRLEL 295 (521)
T ss_pred HHHHH---hhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHH-------HHHHH
Confidence 66665 389999999999998887777777799999999999999999999999887432211100 00000
Q ss_pred ccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+. +........+...+.+++ .|++++.++.+++.++.....||++.+....+
T Consensus 296 ---~~-------~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~l----------------- 348 (521)
T KOG0255|consen 296 ---LL-------RPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGL----------------- 348 (521)
T ss_pred ---Hh-------hHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhc-----------------
Confidence 00 000000001111244444 46688888888889988889999987755432
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hhH--HHHHHHHHHHHHhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNI--LLTALLSGARMFSMGTFIIA 315 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 315 (406)
..+.+.+.........++....+...|+.|||..+..+.+...++++...+.. ... ..........++....+...
T Consensus 349 -g~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (521)
T KOG0255|consen 349 -GGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLI 427 (521)
T ss_pred -CchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 23556666677778899999999999999999999988888777665544322 221 33344444555555566677
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccccccc
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTIDG 395 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 395 (406)
+.+++|++|+.+|+++.+.++..++++++++|++... ........++++++..+.+.+.+..++.|||++++++|+.++
T Consensus 428 ~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~ 506 (521)
T KOG0255|consen 428 FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLL-LRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLD 506 (521)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHH
Confidence 9999999999999999999999999999999988642 222333344445788888888888778899999999999888
Q ss_pred ccc
Q 015488 396 VSN 398 (406)
Q Consensus 396 ~~~ 398 (406)
.++
T Consensus 507 ~~~ 509 (521)
T KOG0255|consen 507 AEN 509 (521)
T ss_pred HHh
Confidence 774
No 8
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.2e-41 Score=332.41 Aligned_cols=358 Identities=30% Similarity=0.503 Sum_probs=250.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~---~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
|||++++++.++..++++++++++ |++.+.++|++.|++.|+.. +...|+.|.+|+++||+..++.+.++.+|.++
T Consensus 74 GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~ 153 (451)
T PF00083_consen 74 GRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILL 153 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 799999999999999999999999 99999999999999999864 56678899999999999999999999999999
Q ss_pred HHHhhHHhccc---chhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 77 EAALAWIVMPI---LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 77 ~~~l~~~~~~~---~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
+..++...... ++||+.+.+.++|+++..+..+++||||+||.+|+|+|||++.++++++.+..+.
T Consensus 154 ~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~----------- 222 (451)
T PF00083_consen 154 ASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE----------- 222 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceecccccccccccccccccccccccc-----------
Confidence 98887765433 4599999999999988888888999999999999999999999988654321110
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhccCh-hhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhccCCCCCcc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSP-RFFKTTILLWVLYFGNSF-VYYGIVLLASELSGSQSKCSSS 231 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~ 231 (406)
+.+++.++.++... .+ ..+.+++++ +++++....+.......+ .++....+.+.+.....
T Consensus 223 ~~~~~~~~~~~~~~----------~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~----- 284 (451)
T PF00083_consen 223 EIEEIKAEKKESQE----------SK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG----- 284 (451)
T ss_pred cccccccccccccc----------cc---eeeeeccccccccccccccccccccccccccccccccccccccccc-----
Confidence 11111100000000 00 122334432 334444433333222221 11222222222221110
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h--hhh----hHHHHHHHH
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T--LQS----NILLTALLS 302 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~--~~~----~~~~~~~~~ 302 (406)
. +.+ +....+..+..+++.+++.++.||+|||+.++.+...++++...+. . ..+ .........
T Consensus 285 ------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 356 (451)
T PF00083_consen 285 ------I-SNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLA 356 (451)
T ss_pred ------c-ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeee
Confidence 0 001 2233344466677888888999999999998887776665544332 1 111 111111111
Q ss_pred H-HHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 303 G-ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 303 ~-~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
. ...+..+..+..+.+++|+||++.|+++.|+++++++++++++|++.+++.+..+....+.+++++++++.++.+++.
T Consensus 357 l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~l 436 (451)
T PF00083_consen 357 LFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFL 436 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEE
Confidence 1 112233556778899999999999999999999999999999999888776655545678888999999999999999
Q ss_pred cccCCccccccccc
Q 015488 382 FETKGKELVNTIDG 395 (406)
Q Consensus 382 ~et~~~~~~~~~~~ 395 (406)
|||||++++|++++
T Consensus 437 pET~g~~l~ei~~~ 450 (451)
T PF00083_consen 437 PETKGKTLEEIQEM 450 (451)
T ss_pred eeCCCCCHHHHHhh
Confidence 99999999998764
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.8e-32 Score=265.81 Aligned_cols=334 Identities=15% Similarity=0.174 Sum_probs=216.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHH--------HHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYIS--------LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~--------l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
|||+.+..+.+++.++++++++++|+++ +.++|+++|+|.|+.. +...++.|++|+++||+..++...+..
T Consensus 85 Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~ 164 (490)
T PRK10642 85 GRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSI 164 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 7999999999999999999999999975 8999999999998874 566789999999999999999998888
Q ss_pred HHHHHHHHhhHHhc--------ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|.++++.+...+. +.+|||++|++.+++.++.++++..+||||+|+..+++.++.. +
T Consensus 165 ~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------~---- 230 (490)
T PRK10642 165 AGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------R---- 230 (490)
T ss_pred HHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------c----
Confidence 88888876654332 3579999999988777766777788999999864332211100 0
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 223 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (406)
++ ..+.+ +. .+.+++++ +++.....+...+.....+|+...+.|.+..
T Consensus 231 ------------~~-~~~~~---------------~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 278 (490)
T PRK10642 231 ------------EG-LQDGP---------------KV---SFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLS 278 (490)
T ss_pred ------------cc-ccccc---------------cC---CHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 00 11122222 2333443334444455667777666665432
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHh-h-hhhHHHHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVT-L-QSNILLTAL 300 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~ 300 (406)
... +..............++.+++.+++++++||+|||+.+..+.+...+.... ... . .+.......
T Consensus 279 ~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (490)
T PRK10642 279 HNL----------HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAG 348 (490)
T ss_pred Hhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 110 011111122233344667788889999999999999887665433322221 111 1 111111111
Q ss_pred HHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchh-hHHHHHHHHHHHHHHHHHHh
Q 015488 301 LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~ 379 (406)
.....++..+..+....+.+|++|++.|+++.|+.++++++++.++|++.+++.+..+. ..++++..+.++++.+..++
T Consensus 349 ~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 349 LLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 11111222223345566778999999999999999999999899999998887765432 34445555666666665554
Q ss_pred cccccCCccccc
Q 015488 380 IPFETKGKELVN 391 (406)
Q Consensus 380 ~~~et~~~~~~~ 391 (406)
.|||+++.+++
T Consensus 429 -~pes~~~~~~~ 439 (490)
T PRK10642 429 -MKETANRPLKG 439 (490)
T ss_pred -hccccCCCCCC
Confidence 47998877654
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3e-31 Score=261.00 Aligned_cols=355 Identities=22% Similarity=0.285 Sum_probs=229.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc------------ccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS------------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS 67 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a------------~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~ 67 (406)
|||+.++++.+++.++.++++++ +++..++++|+++|++.|... ....++.|++|+++||+.+++.+
T Consensus 83 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~ 162 (479)
T PRK10077 83 GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQ 162 (479)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHH
Confidence 69999999999999988887763 235778999999999998864 56678999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHhc--------ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcC
Q 015488 68 TFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQ 139 (406)
Q Consensus 68 ~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~ 139 (406)
.+..+|.++++.++..+. +..+||+.|++.+++.++..+..+++||||+|+..+++.|++++..++..+.++
T Consensus 163 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (479)
T PRK10077 163 FAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL 242 (479)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh
Confidence 999999999887765442 356999999999888887777778899999999888998888776665432110
Q ss_pred CCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHH--HHHHHHHHHHHHHHHHH
Q 015488 140 TSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL--WVLYFGNSFVYYGIVLL 217 (406)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 217 (406)
. ++..++ .....++. .+. ....+. +....... ....+.+...++...++
T Consensus 243 ~---------------~~~~~~------~~~~~~~~--~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (479)
T PRK10077 243 A---------------TQALQE------IKHSLDHG--RKT----GGKLLM--FGVGVIVIGVMLSVFQQFVGINVVLYY 293 (479)
T ss_pred H---------------HHHHHH------HHHHHHHh--hhh----hhhhcc--hhHHHHHHHHHHHHHHHHhChhHHHHH
Confidence 0 000000 00000000 000 000000 00011111 11111122222333333
Q ss_pred HHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hh-h
Q 015488 218 ASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QS-N 294 (406)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~~-~ 294 (406)
.|.+....+ ..............+..+++.+++++++||+|||+.++.+.+...+....+... .+ .
T Consensus 294 ~p~i~~~~g-----------~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~ 362 (479)
T PRK10077 294 APEIFKTLG-----------ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP 362 (479)
T ss_pred HHHHHHHcC-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcc
Confidence 343321110 001111223344556778899999999999999999988777665544433221 11 1
Q ss_pred H-HHH-HHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh------hhchhhHHHHHH
Q 015488 295 I-LLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV------TSCHQTAAILLL 366 (406)
Q Consensus 295 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~------~~~~~~~~~~~~ 366 (406)
. ... .+......+..+..+..+.+.+|++|++.|+++.|+.++++++++++++.+.+.+. +..+....+.++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 442 (479)
T PRK10077 363 GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIY 442 (479)
T ss_pred cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHH
Confidence 1 111 11111111112223567889999999999999999999999999999988776543 233344567778
Q ss_pred HHHHHHHHHHHHhcccccCCccccccccc
Q 015488 367 EALIVLSVVVILLIPFETKGKELVNTIDG 395 (406)
Q Consensus 367 ~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 395 (406)
++.+++++++.+++.||||+++++|..+.
T Consensus 443 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 443 GCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 88888888888888899999999887654
No 11
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-34 Score=260.92 Aligned_cols=366 Identities=23% Similarity=0.328 Sum_probs=256.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc-------HHHHHHHHHHhhccCCcchh-hHHHHHhhcCCCcchhHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN-------YISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTF 72 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~-------~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 72 (406)
|||+++-..+++++++++++++... ..++...|+++|+|+|+.+. ..+..+|.+..++||...+.......+
T Consensus 112 GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 112 GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecch
Confidence 7999999999999999998887643 46799999999999999864 456789999999999999888888888
Q ss_pred HHHHHHHhhHHhcc-------c--------chhHHHHHHhhHHHHHHHHHHHhccCCcchhhcc-CChhhHHHHHHHHHH
Q 015488 73 GSVSEAALAWIVMP-------I--------LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK-GRITDAHNILDKIAQ 136 (406)
Q Consensus 73 G~~l~~~l~~~~~~-------~--------~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~-~~~~~a~~~l~~~~~ 136 (406)
|.+.+..++..+.. . .-||..|.++.+|+++.++.++.||||++|..-+ +|.++|.+ ++
T Consensus 192 GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~---d~-- 266 (538)
T KOG0252|consen 192 GILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAG---DM-- 266 (538)
T ss_pred hHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhh---cc--
Confidence 88888877766421 1 1399999999999999999999999999998433 33333331 11
Q ss_pred HcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015488 137 FNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVL 216 (406)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (406)
.++... +++++++..+.. + ..++.+..+...+...+-++.+.....||...+.+|+..+
T Consensus 267 --~k~~~~---------~~~~~~~~~~~~--------~--~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL 325 (538)
T KOG0252|consen 267 --KKVLSV---------DIEAESTAESDV--------P--PPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNL 325 (538)
T ss_pred --cccccc---------ccchhhccccCC--------C--CcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Confidence 111000 111111110000 0 0011111222222222445555667778888888998887
Q ss_pred HHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--
Q 015488 217 LASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN-- 294 (406)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~-- 294 (406)
+...+....+........ ...-.....+.++..+..+||++++.+++|++|||.+.+.++++..++...+...+++
T Consensus 326 ~~s~I~~~ig~~~~~~~~--~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~ 403 (538)
T KOG0252|consen 326 FQSVIFSAIGVIPSANTY--HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE 403 (538)
T ss_pred HHHHHHHhhccCCCcchH--HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc
Confidence 776665422221111000 0000122345566667788999999999999999999999988888877666543331
Q ss_pred --H-HHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh-----hchhhHHHHHH
Q 015488 295 --I-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-----SCHQTAAILLL 366 (406)
Q Consensus 295 --~-~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~-----~~~~~~~~~~~ 366 (406)
. ..+...+..++...|+....+++.+|.||+++|++..|++.+.|++|++++.+.+.++.+ ..+....++++
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~ 483 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIIL 483 (538)
T ss_pred ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHH
Confidence 1 112223334455678888999999999999999999999999999999999999888877 55556678888
Q ss_pred HHHHHHHHHHHHhcccccCCccccccccc
Q 015488 367 EALIVLSVVVILLIPFETKGKELVNTIDG 395 (406)
Q Consensus 367 ~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 395 (406)
+.+++++.+..++++ |||+|+++|+.++
T Consensus 484 ~~~~~~gi~~T~l~p-Etk~~~leei~~e 511 (538)
T KOG0252|consen 484 AGCMLLGILFTLLIP-ETKGKSLEEISNE 511 (538)
T ss_pred HHHHHHhHheeEEee-cccccCHHHhcCh
Confidence 999888877776665 9999999998554
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=2.2e-28 Score=237.51 Aligned_cols=319 Identities=18% Similarity=0.201 Sum_probs=204.7
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
|||+.+..+.+++.++++++++++|++ .++++|+++|++.|+.. ....+..|+.|+++||+..+..+.++.
T Consensus 92 Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~ 171 (438)
T PRK09952 92 GRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYG 171 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 799999999999999999999999987 59999999999999874 456788999999999999999999999
Q ss_pred HHHHHHHHhhHHhc--------ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|.++++.+...+. ..++||++|++.+++.++..+.+..+||||+|+.++++.++.
T Consensus 172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~---------------- 235 (438)
T PRK09952 172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA---------------- 235 (438)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc----------------
Confidence 99998877655443 257999999999988877777777899999875332111000
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELS 222 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (406)
++ + .+ ....++ +++. ........+...+.+|....+.+.+.
T Consensus 236 ------------~~-----~-~~-----------------~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~y~ 277 (438)
T PRK09952 236 ------------KK-----R-IP-----------------VIEALLRHPGA---FLKIIALRLCELLTMYIVTAFALNYS 277 (438)
T ss_pred ------------cc-----c-CC-----------------HHHHHHHchHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00 000011 1111 12222233333444555444444332
Q ss_pred ccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhhHHHHH
Q 015488 223 GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTA 299 (406)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 299 (406)
.+.. +...........+.....+++..+.++++||+|||+.+..+.++..+....... ..+......
T Consensus 278 ~~~~----------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T PRK09952 278 TQNL----------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVF 347 (438)
T ss_pred HHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 1100 001111111222334556778889999999999999887765544433222211 111111111
Q ss_pred -HHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHh-HHHHHHHHHHHHHhhhc-h-hhHHHHHHHHHHHHHHH
Q 015488 300 -LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSC-H-QTAAILLLEALIVLSVV 375 (406)
Q Consensus 300 -~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~-~g~~~~p~~~~~l~~~~-~-~~~~~~~~~~~~~i~~~ 375 (406)
......+......+..+.+.+|.+|+++|+++.|+.+.+++ +++.++|.+.+.+.+.. + ...++.+.+++++++.+
T Consensus 348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v 427 (438)
T PRK09952 348 FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAM 427 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHH
Confidence 11111122223345678889999999999999999998877 78899999999887743 2 23445566666777766
Q ss_pred HHHhccccc
Q 015488 376 VILLIPFET 384 (406)
Q Consensus 376 ~~~~~~~et 384 (406)
..+.. +||
T Consensus 428 ~~~~~-~~~ 435 (438)
T PRK09952 428 TALLM-KDN 435 (438)
T ss_pred HHHHc-ccc
Confidence 65544 454
No 13
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=7.8e-29 Score=243.08 Aligned_cols=364 Identities=21% Similarity=0.307 Sum_probs=230.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~---~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
+||+.++.+.++..++.+++++.. +++.+++.|+++|+|.|... ....++.|++|+++|++.+++.+.+..+|.++
T Consensus 99 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 99 GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 699999999999999998885543 45589999999999988764 45668899999999999999999999999999
Q ss_pred HHHhh---HHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 77 EAALA---WIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 77 ~~~l~---~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
++.++ ....+..+||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++..+.+..+ .
T Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 247 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED-----------K 247 (481)
T ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCc-----------H
Confidence 99988 555567799999999877777777777889999999888877777665554432211000 0
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 233 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (406)
+..+.....+ ..........+.....+...+++..++......+.++...........+.+.+....+
T Consensus 248 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------- 315 (481)
T TIGR00879 248 ELLDELELID-----IKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAG------- 315 (481)
T ss_pred HHHHHHHHHH-----HHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcC-------
Confidence 0000000000 0000000000011111111111111122222222222222222222223332221110
Q ss_pred cccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh-hh------hHHH-HHHHH
Q 015488 234 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-QS------NILL-TALLS 302 (406)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~-~~------~~~~-~~~~~ 302 (406)
..............++.+++.+++++++||+|||+.+..+..+..++...+. .. .. .... .....
T Consensus 316 ----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (481)
T TIGR00879 316 ----VSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILL 391 (481)
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHH
Confidence 0111122334445567788999999999999999988877665555443332 11 11 1111 11111
Q ss_pred HHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccc
Q 015488 303 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 382 (406)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 382 (406)
....+..+..+..+.+.+|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+..+....|.++++++++++++.+++.|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 392 FIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 22222233345567788999999999999999999999999999999888777655556678888888888888888889
Q ss_pred ccCCccccc
Q 015488 383 ETKGKELVN 391 (406)
Q Consensus 383 et~~~~~~~ 391 (406)
|+|+++.+|
T Consensus 472 ~~~~~~~~~ 480 (481)
T TIGR00879 472 ETKGRTLEE 480 (481)
T ss_pred cCCCCChhh
Confidence 999887654
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=2e-27 Score=230.61 Aligned_cols=317 Identities=19% Similarity=0.227 Sum_probs=198.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
|||+.+..+.+++.++++++++++|+. .++++|+++|++.|+. +....++.|+.|+++||+..++.+.+..
T Consensus 91 Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~ 170 (432)
T PRK10406 91 GRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLI 170 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHH
Confidence 799999999999999999999999875 5999999999999986 4567789999999999999999888888
Q ss_pred HHHHHHHHhhHHhc--------ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
.|.++++.+...+. +.+|||++|++.+++.++.++.+..+||+|++..++ ..
T Consensus 171 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-----------------~~--- 230 (432)
T PRK10406 171 GGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA-----------------LK--- 230 (432)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh-----------------hc---
Confidence 88888776654432 257999999999999888777777889988642100 00
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 223 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (406)
+ +. ++.++++ .++...............+|+...|.|.+..
T Consensus 231 -------------------~---------------~~---~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 271 (432)
T PRK10406 231 -------------------E---------------AG---SLKGLWR--NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLV 271 (432)
T ss_pred -------------------c---------------cc---cHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0111121 1111222222223334556666666665432
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hh-h-hhHHHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL-Q-SNILLTA 299 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~ 299 (406)
+.. +...........+......++..+.|+++||+|||+.+..+..+..+...++. .. . +......
T Consensus 272 ~~~----------g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 272 NTA----------GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred Hhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 110 01111111122233345566777889999999999887765544333322221 11 1 1111111
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhH-HHHHHHHHHHHHhhhchhhH-HHHHHHHHHHHHHHHH
Q 015488 300 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVI 377 (406)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~-g~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~ 377 (406)
+.....+......+..+.+.+|.+|++.|+++.|+++++++. .+...|.+.+ +++..+.+. .+++.+++.+++.+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 111111111122345677889999999999999999999886 3445787766 445444333 3444556666666555
Q ss_pred HhcccccCCccc
Q 015488 378 LLIPFETKGKEL 389 (406)
Q Consensus 378 ~~~~~et~~~~~ 389 (406)
+++ ++++|+.
T Consensus 421 ~~l--~~~~~~~ 430 (432)
T PRK10406 421 LML--HRKGKGM 430 (432)
T ss_pred HHh--hhccccc
Confidence 543 6667664
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=1.8e-26 Score=218.38 Aligned_cols=307 Identities=16% Similarity=0.138 Sum_probs=196.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
+||+.++........+......++|+..+++.|+++|+|.|........++|+.|+++|++.+++.+.+.++|.++++.+
T Consensus 54 grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~ 133 (368)
T TIGR00903 54 FKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAA 133 (368)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57887665554444443333444799999999999999988644445556899999999999999999999999999999
Q ss_pred hHHhcccchhHHHHHHhhHHHHH-HHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 81 AWIVMPILTWRWLLALSAIPAFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 81 ~~~~~~~~~Wr~~f~i~~ip~~~-~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+..+.+..|||+.|.+.++++++ ..+.++.+||+|++.. +..+..+
T Consensus 134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~---~~~~~~~------------------------------ 180 (368)
T TIGR00903 134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA---EGFGFKD------------------------------ 180 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCcchHH------------------------------
Confidence 99888889999999997766555 4556778999997521 0000000
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCcc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ 239 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (406)
.. +++++++++ +..+.++..++.....+|++..|.|.+..+.. .
T Consensus 181 -------~~--------------~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g-----------~- 224 (368)
T TIGR00903 181 -------AV--------------KEFGALAGR---KDLWIIGAILGFGVALFDNLAIWLEAALRPAG-----------L- 224 (368)
T ss_pred -------HH--------------HHHHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------C-
Confidence 00 011122221 12234455566667778888888887653211 0
Q ss_pred chhhHHHHHHHHhhhhHHHHHHHHHHhhhchH---HHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 015488 240 DASVYINVFITSFAELPGLLTAALLVDRVGRK---LSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA 315 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
+.. ......+..+.|.+..++++||..|| +.... ..+..++.........+............++....++..
T Consensus 225 s~~---~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 301 (368)
T TIGR00903 225 EDI---AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAII 301 (368)
T ss_pred ChH---HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHH
Confidence 001 11122233344555668888887543 33332 222222222222222222222222222333444555667
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
+.+.+|++|++.|+++.|+.++.++++++++|.+.+.++. +....|.++++..+++++...+++
T Consensus 302 ~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 302 MDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred HHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999999999999999998876663 444567778888888877765433
No 16
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=1.1e-24 Score=211.59 Aligned_cols=322 Identities=17% Similarity=0.230 Sum_probs=190.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
|||+.++.+..++.++++++++++|++ .++++|+++|++.|... ....++.|++|+++||+.+++.+.+.+
T Consensus 84 Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~ 163 (434)
T PRK15075 84 GRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ 163 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHH
Confidence 699999999999999999999999987 47999999999998764 456688999999999999999988888
Q ss_pred HHHHHHHHhhHHh--------cccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIV--------MPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~--------~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|..+++.++..+ .+..|||++|++..++..+.++.+...||++++..++++
T Consensus 164 ~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-------------------- 223 (434)
T PRK15075 164 VAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR-------------------- 223 (434)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc--------------------
Confidence 8877777666554 246799999998765544434444445554332100000
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 223 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (406)
.+.+. .++.. .+.++.........+.....++....+.|.+..
T Consensus 224 ------------------~~~~~-----------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 266 (434)
T PRK15075 224 ------------------PSMRE-----------------IFRSL--AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGK 266 (434)
T ss_pred ------------------ccccc-----------------HHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00000 011111222222223334445555555554432
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HH-h-hhhhH-HHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LV-T-LQSNI-LLTA 299 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~-~-~~~~~-~~~~ 299 (406)
+.- +..............++.+++.+++|+++||+|||+.+..+.....+.... .. . ..... ....
T Consensus 267 ~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 267 TVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred Hhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 110 011111222334455677889999999999999999877654433222211 11 1 11111 1111
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhH-HHHHHHHHHHHHhhhchhhH---HHHHHHHHHHHHHH
Q 015488 300 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTA---AILLLEALIVLSVV 375 (406)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~-g~~~~p~~~~~l~~~~~~~~---~~~~~~~~~~i~~~ 375 (406)
......++.....+..+.+.+|.+|++.|+++.|+.+++++. ++.++|.+.+.+.+..+... .+++++.++ .+
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~~~~~---~~ 413 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGYWLSFAAVC---GL 413 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHHHHHH---HH
Confidence 111111222222344567789999999999999999888886 58889999888877655321 122232222 22
Q ss_pred HHHhcccccCCcccccc
Q 015488 376 VILLIPFETKGKELVNT 392 (406)
Q Consensus 376 ~~~~~~~et~~~~~~~~ 392 (406)
+..+...+.++..++..
T Consensus 414 ~~~~~~~~~~~~~~~~~ 430 (434)
T PRK15075 414 IATLVLYRRRGARLQAA 430 (434)
T ss_pred HHHHHhccccchhhhhh
Confidence 23334446666665543
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=7.5e-25 Score=212.36 Aligned_cols=328 Identities=19% Similarity=0.224 Sum_probs=203.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++..+++++++++.++++|+++|++.|... ....++.|++|+++|++..++...+..+|.++++.
T Consensus 81 g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 160 (426)
T PRK12307 81 GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY 160 (426)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHH
Confidence 69999999999999999999999999999999999999988754 45667899999999999999999999999999998
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+...+.+..+||+.|++..++.++.++.....||+++|...+.+ + . . ++.
T Consensus 161 l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~------------~---~---~-----------~~~- 210 (426)
T PRK12307 161 FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS------------G---K---G-----------KHS- 210 (426)
T ss_pred HHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh------------c---c---c-----------ccc-
Confidence 88777777899999998777766655555567888765321100 0 0 0 000
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCcc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ 239 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (406)
+...+. .+ ...++.++++..+.........+......+....+.|.+..+.+ ..
T Consensus 211 -~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~ 264 (426)
T PRK12307 211 -QSAWSV-----------FS---LSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG-----------FD 264 (426)
T ss_pred -ccchhh-----------hh---HHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CC
Confidence 000000 00 01222332222222222222222211122222223333221110 11
Q ss_pred chhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhhHHHH-HHHHHHHHHhhhhhhhhhh
Q 015488 240 DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLT-ALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (406)
............++.+++.++.+++.||+|||+.+..+.+++.+........ .+..... ...+...+...+..+....
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPK 344 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHH
Confidence 1111222334456788899999999999999998887766555443332221 1111111 1111211222233445567
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhH-HHHHHHHHHHHHHHHHHhccccc
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+..|.+|++.|+++.|+.++++++++.++|.+.+.+.+..+... .+++.++.++.+.....+..||+
T Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (426)
T PRK12307 345 FLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDR 412 (426)
T ss_pred HHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChh
Confidence 77899999999999999999999999999999988877655322 23344444444444443444554
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=2.9e-24 Score=206.95 Aligned_cols=315 Identities=23% Similarity=0.327 Sum_probs=203.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+..+..++.++.++++|++.+++.|++.|++.|... ....++.|+.|+++|++.+++.+.+..+|..+++.
T Consensus 78 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 157 (406)
T PRK11551 78 GRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASV 157 (406)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999987653 45667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.|++.++..++. .+...++||+|++...+++.++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------------------------ 207 (406)
T PRK11551 158 IGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA------------------------------ 207 (406)
T ss_pred HHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh------------------------------
Confidence 8877777789999999887655544 445567899987532211000000
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
.. ....++++..+.....+..++.....++....+.|.+..+.+ .
T Consensus 208 -------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~ 252 (406)
T PRK11551 208 -------PV-----------------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG-----------L 252 (406)
T ss_pred -------hh-----------------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------C
Confidence 00 000000111111222233333333344444444444432211 1
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
.............++.+++.++.+++.||.|||+.+..+.+...+....+....+............++..+..+..+.+
T Consensus 253 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (406)
T PRK11551 253 SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYAL 332 (406)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 11111223334456788999999999999999998877554444433332222222222122222222333455667788
Q ss_pred cccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHH-HHHHHHHHHHHHHHHHhc
Q 015488 319 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAA-ILLLEALIVLSVVVILLI 380 (406)
Q Consensus 319 ~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~-~~~~~~~~~i~~~~~~~~ 380 (406)
.+|.+|++.|+++.|+.+.++++|+.++|.+.+.+.+..+.... +.....+.+++.+..++.
T Consensus 333 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 333 APLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999988775443322 334444445554444444
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.94 E-value=2.5e-24 Score=207.52 Aligned_cols=315 Identities=17% Similarity=0.227 Sum_probs=193.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||+.+..+.+++.+++.++++++|++.+++.|+++|++.|... ....++.|++|+++||+.+++++.+..+|.++++.
T Consensus 71 G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 150 (412)
T TIGR02332 71 GARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLI 150 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999998764 45567899999999999999999999999999999
Q ss_pred hhHHhcc------cchhHHHHHHhhHHHHHH-HHHHHhccCCcc---hhhccCChhhHHHHHHHHHHHcCCCCCCCCCcC
Q 015488 80 LAWIVMP------ILTWRWLLALSAIPAFVL-LIFIVFMPESPR---YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 149 (406)
Q Consensus 80 l~~~~~~------~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~---~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 149 (406)
++..+.+ ..|||+.|.+.+++.++. .+.++++||+|+ |+. +++++..++..+.+..+.
T Consensus 151 ~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~-----~~~~~~~~~~~~~~~~~~------- 218 (412)
T TIGR02332 151 LSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLD-----EEDKKALKEMIDNDQLTL------- 218 (412)
T ss_pred HHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCC-----HHHHHHHHHHHHhccccc-------
Confidence 8876642 469999999998887665 455677899995 332 122222211111110000
Q ss_pred CCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015488 150 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 229 (406)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 229 (406)
++.+++.++.+. .....++.++++.. +.....++.....++++..|.|.+..+...
T Consensus 219 ------~~~~~~~~~~~~------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~-- 274 (412)
T TIGR02332 219 ------EQPEGAFAHAAM------------PQRSMLREIFTPAI----MLYTLAYFCLTNTLSAINIWTPQILQSFNQ-- 274 (412)
T ss_pred ------cccccccccccc------------cHHHHHHHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 000000000000 00001222333332 223333444445566666666655432100
Q ss_pred cccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 015488 230 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM-TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 308 (406)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (406)
...............++.++|.+++++++||++||+.. ........+.+.......+............+..
T Consensus 275 -------~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (412)
T TIGR02332 275 -------GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGS 347 (412)
T ss_pred -------CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 00011112233455577888999999999999977643 3322222222221111111111111111111111
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
....+..+....|.+|++.|+++.|+.++.+++|++++|.+.+.+.+..+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 348 FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 12223445666789999999999999999999999999999887777654
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=6.1e-25 Score=200.52 Aligned_cols=327 Identities=20% Similarity=0.323 Sum_probs=219.5
Q ss_pred chhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 015488 3 EGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 81 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~ 81 (406)
|.-+-++++++.+.+++.+++++...+.++-+++|...|.+ +.....+.-|+|+++||++.++++++.++|..+.++++
T Consensus 94 r~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 94 RYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred ceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 44566789999999999999999999999999999988876 45666788999999999999999999999999999988
Q ss_pred --HHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 82 --WIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 82 --~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
..+.++.+||..|++.++.+++. ++.++.++|+|+ +.|-.+- ++.+ + +..+++
T Consensus 174 ~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq---s~GLP~i-----e~~~---~-------------d~~e~~ 229 (448)
T COG2271 174 LLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ---SEGLPPI-----EEYR---G-------------DPLEIY 229 (448)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc---ccCCCCH-----HHhh---c-------------Cchhhh
Confidence 66777779999999999887765 667778899997 2222110 0000 0 000000
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhccCCCCCcccccc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVY---YGIVLLASELSGSQSKCSSSILLS 235 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~ 235 (406)
+++++.+ +. +.++.+.+...+.. .+|.+.+.+.+.| |++..|.|.+..+.-
T Consensus 230 -~~~~~~~--------------~l-s~~~i~~~YVL~Nk-~iW~la~a~vfvYivR~gi~dW~p~YL~e~k--------- 283 (448)
T COG2271 230 -EEEKENE--------------GL-TAWQIFVKYVLKNK-LIWLLALANVFVYVVRYGINDWGPLYLSEVK--------- 283 (448)
T ss_pred -hhhccCC--------------Cc-cHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc---------
Confidence 0000000 00 00011101011111 2455555555555 777777776543211
Q ss_pred cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHHHHHHHH-HHHHHHHhhhh--hHHHHHHHHHHHHHhhh
Q 015488 236 ENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTIMFIFVC-IFLLPLVTLQS--NILLTALLSGARMFSMG 310 (406)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 310 (406)
+....+......+.-.++++|+++.|+++||+ |||......+.+.. +++..+....+ .....+.++...++..|
T Consensus 284 -~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyG 362 (448)
T COG2271 284 -GFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYG 362 (448)
T ss_pred -CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh
Confidence 11112223334455588999999999999997 88877755433333 33333332222 24444555666677788
Q ss_pred hhhhhhhhcccccCcchhhHHHhHHHHhHhH-HHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 311 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 311 ~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~-g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
+.-+......|..|.+.-++|.|+...++++ |+..+....+++.|..+....|+++.+.++++.+..+..
T Consensus 363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 8878888999999999999999999999999 888888887777676566667777777776666555443
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=1e-23 Score=202.59 Aligned_cols=314 Identities=19% Similarity=0.268 Sum_probs=195.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++.++++++++++.+++.|++.|++.+... ....++.|+.|+++|++..++.+.+..+|..+++.
T Consensus 75 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 154 (405)
T TIGR00891 75 GRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQ 154 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999988764 45667899999999999999999999999999999
Q ss_pred hhHHhcccch--hHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 80 LAWIVMPILT--WRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 80 l~~~~~~~~~--Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
++..+.+..+ ||+.|.+.+++.++.++....+||+|++...+++.++..+..++..+ .+ ...++
T Consensus 155 l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~ 220 (405)
T TIGR00891 155 VYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG---GE-----------HRIAN 220 (405)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc---cc-----------hhhhh
Confidence 8887766555 99999998888777766777889998765432222111111111100 00 00000
Q ss_pred ccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 158 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
..+ +....... ..++.+.................++...+.|.+.... .+
T Consensus 221 ---~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g 270 (405)
T TIGR00891 221 ---IVM----------------TLAAAMVQ-SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD----------LG 270 (405)
T ss_pred ---hhh----------------hhhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH----------hC
Confidence 000 00000000 0011111111122222222222222222222111100 00
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV-TLQSNILLTALLSGARMFSMGTFIIAN 316 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
..............++.+++.++.+++.||+|||+.+..+...+.+...... ...+............++..+.++...
T Consensus 271 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (405)
T TIGR00891 271 LSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILP 350 (405)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHH
Confidence 1111122233445577889999999999999999988776655433322222 212222111111222233334455667
Q ss_pred hhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 317 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 317 ~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
.+.+|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+
T Consensus 351 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 351 KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999998888665
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=2.2e-23 Score=199.75 Aligned_cols=315 Identities=28% Similarity=0.396 Sum_probs=204.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++.++.+++++++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+.+..+|..+++.
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 159 (398)
T TIGR00895 80 GRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGF 159 (398)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999998875 456678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHH-HHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIP-AFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip-~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
+...+.+..+||+.+++.++. .+...+...++||+|++...+ +.+++.+..++....+..+.+ .+.+++
T Consensus 160 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 229 (398)
T TIGR00895 160 LAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ---------SALPEQ 229 (398)
T ss_pred HHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc---------cccccc
Confidence 998888888999999988644 444456677899999887655 445555554444332211100 000000
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+++. ...+ .....+++++..+.....+...+.....++....+.|.+....+ .
T Consensus 230 ----~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~ 282 (398)
T TIGR00895 230 ----KATQ---------GTKR---SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG-----------F 282 (398)
T ss_pred ----cccc---------chhh---HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------C
Confidence 0000 0000 01122333444444554555554445555555555553322110 1
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
.............++.+++.++.+++.||+|||+...... ..++....+.. ..+............++..+..+..+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 283 SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLL-LGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222334445778899999999999999995444333 33332222222 222222222222333333445667788
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHH
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 353 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l 353 (406)
+.+|.+|++.|+++.|+.+.++++|+.++|.+.+++
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999999999999987754
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=1.7e-23 Score=203.25 Aligned_cols=339 Identities=16% Similarity=0.167 Sum_probs=204.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+.++.++..++.++.++++|++.+.+.|++.|++.|.. +....++.|++|+++||+.+++++.+..+|..+++.
T Consensus 86 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 165 (434)
T PRK11663 86 NARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPL 165 (434)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999988765 345667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
+...+.+..+||+.|.+.+++.++. ++..+++||+|++.......++. ++..+.
T Consensus 166 ~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------------------~~~~~~- 220 (434)
T PRK11663 166 VVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR------------------------HDALEL- 220 (434)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc------------------------cccccc-
Confidence 8888878889999999988776554 44556789988643111000000 000000
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
.++.+. .+. ..++..+. ..+.++. ...+...++.....+++...|.|.+..+.. +.
T Consensus 221 --~~~~~~------~~~-~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~----------g~ 276 (434)
T PRK11663 221 --AQQQEG------AGL-SRKEILTK-YVLLNPY----IWLLSFSYVLVYVVRAAINDWGNLYMSETL----------GV 276 (434)
T ss_pred --chhccc------cCC-ChhhhHHH-HHhcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CC
Confidence 000000 000 00000000 0111121 112222223333344444445444331110 00
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhh--chH-HHHHHHHHHHH--HHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRV--GRK-LSMTIMFIFVC--IFLLPLVTLQSNILLTALLSGARMFSMGTFI 313 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (406)
.............+++++|.+++++++||+ ++| ........... .+........+........+...++..++..
T Consensus 277 s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 356 (434)
T PRK11663 277 DLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQM 356 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHH
Confidence 001111223344567889999999999998 333 32222111111 1111111111111111122222222223333
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 388 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 388 (406)
....+.+|.+|++.|+++.|+.++.+++|+.++|.+.+++.+..+....+.+.+++++++++..++..+++++++
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPRE 431 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence 445567899999999999999999999999999999998888766556677778888887777766665655554
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=3.4e-23 Score=197.84 Aligned_cols=330 Identities=16% Similarity=0.219 Sum_probs=198.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++..+.++++|++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+....+|.++++.
T Consensus 57 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 136 (399)
T TIGR00893 57 GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGP 136 (399)
T ss_pred CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHH
Confidence 6899999999999999999999999999999999999998765 455678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.|.+.+++.++..+ ..+..||+|+.. .+.++.++... ..+ . . .+.+
T Consensus 137 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~-----~----~--~~~~ 196 (399)
T TIGR00893 137 LVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA---KWLTEEEKYIV------VGG-----L----L--AEQQ 196 (399)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc---ccCCHHHHhhc------chh-----h----c--cccc
Confidence 998887888999999998877666543 445567776521 11111110000 000 0 0 0000
Q ss_pred cccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+.+++ +......+..+ +++.+ ......+.....++....+.|.+..+.. +
T Consensus 197 --~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 247 (399)
T TIGR00893 197 --GKGPS-------------TPKKYQIKELLKDRRVW----GLALGQFLVNIGLGFFLTWFPTYLVQER----------G 247 (399)
T ss_pred --ccccc-------------CCCccchHHHhcCHHHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHh----------c
Confidence 00000 00000111222 22222 2222222222333333333332211100 0
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHH--HHHHHH-H-HHHHHH-HHH-Hhh-hhhHHHHHHHHHHHHHhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKL--SMTIMF-I-FVCIFL-LPL-VTL-QSNILLTALLSGARMFSMG 310 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~--~~~~~~-~-~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~~ 310 (406)
..............+.++++.++++++.||+|||+ ...... . ...+.. ... ... .+.............+..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (399)
T TIGR00893 248 LSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG 327 (399)
T ss_pred ccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh
Confidence 11111122333445677889999999999999996 111111 1 111111 111 111 1111111111122222233
Q ss_pred hhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-hhHHHHHHHHHHHHHHHHHHh
Q 015488 311 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 311 ~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~ 379 (406)
..+..+.+.+|.+|++.|+++.|+.+.+.++|+.++|.+.+.+.+..+ ....+.+.+++++++.+..++
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 567788899999999999999999999999999999999998887665 445566666666666555443
No 25
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=1.8e-22 Score=195.11 Aligned_cols=331 Identities=16% Similarity=0.073 Sum_probs=208.0
Q ss_pred CcchhhHHHHHHHHHHHHHHh-----hcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSA-----FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~-----~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
+||+.+..+..+..++....+ ..++++.+++.|+++|++.|.. +....++.|+.|+++|++..++......+|.
T Consensus 80 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 80 DRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS 159 (417)
T ss_pred CCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence 578888877777666655433 2578899999999999987654 3445677899999999999999999999999
Q ss_pred HHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCC
Q 015488 75 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 154 (406)
Q Consensus 75 ~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (406)
.+++.++..+.+..+||+.+.+.++..++..+..+.+||+|+... ++.+
T Consensus 160 ~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~----------------------------- 208 (417)
T PRK10489 160 VISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQ--PREH----------------------------- 208 (417)
T ss_pred HhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCc--cccc-----------------------------
Confidence 999999988877789999999888777766666677787654110 0000
Q ss_pred cccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015488 155 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 234 (406)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (406)
+.++. + +.++..++++..+...+..... . ...+...+.|.+..+.
T Consensus 209 --------~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~p~~~~~~--------- 253 (417)
T PRK10489 209 --------PLRSL-----------L---AGFRFLLASPVVGGIALLGGLL---T-MASAVRVLYPALADEV--------- 253 (417)
T ss_pred --------chHHH-----------H---HHHHHHHcChHHHHHHHHHHHH---H-HHHhHHHhhHHHHHhc---------
Confidence 00000 0 0111112211111111111111 1 1122222333222110
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII 314 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
.+..............++.+++.++.+++.||.++|+.+..+..+..+..+.+....+............+......+.
T Consensus 254 -~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 332 (417)
T PRK10489 254 -WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLL 332 (417)
T ss_pred -cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111112223345677888899999999977777666655444443333322222221111111111211222344
Q ss_pred hhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCcccccccc
Q 015488 315 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTID 394 (406)
Q Consensus 315 ~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~ 394 (406)
.+.+..|..|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+...+++.++.+++.....+|+|+++++|+++
T Consensus 333 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 333 QYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 56788899999999999999999999999999999998888766666677777777776677777778999999999999
Q ss_pred cccc
Q 015488 395 GVSN 398 (406)
Q Consensus 395 ~~~~ 398 (406)
|.+.
T Consensus 413 ~~~~ 416 (417)
T PRK10489 413 DASD 416 (417)
T ss_pred CCCC
Confidence 8765
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=1.7e-22 Score=199.83 Aligned_cols=356 Identities=18% Similarity=0.244 Sum_probs=202.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+.++.++..++.++.++++|+..+++.|++.|++.+.. .....++.|..|+++|++..++...+..+|..+++.
T Consensus 83 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 162 (496)
T PRK03893 83 GRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQ 162 (496)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999988765 445667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
++..+.+..+||+.|++..++.++.++....+||++++...+++.++.++..+...+.++. ......
T Consensus 163 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 229 (496)
T PRK03893 163 VYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHR-------------IINILL 229 (496)
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhH-------------HHHHHH
Confidence 9988888899999999877776666666677899887643322211111111110000000 000000
Q ss_pred ccCCccccchhhhccccccccccc-------------hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015488 160 STSEETPLLSSARKRTTVRKSGFS-------------SFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 226 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (406)
. ...............+.... .+.....++.+.....+....+......++...+.|.+....
T Consensus 230 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~- 305 (496)
T PRK03893 230 T---LAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD- 305 (496)
T ss_pred H---HHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-
Confidence 0 00000000000000000000 000000000000011111111111111112222333332100
Q ss_pred CCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhh-HHHHHHHHHH
Q 015488 227 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSN-ILLTALLSGA 304 (406)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 304 (406)
.+..............++.+++.+++++++||+|||+.+..+..+..+..+..... ... .......+..
T Consensus 306 ---------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (496)
T PRK03893 306 ---------LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQ 376 (496)
T ss_pred ---------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 01111222233444557788899999999999999998877655544433322221 111 1111111221
Q ss_pred HHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHH-HHHHHHHHhccc
Q 015488 305 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI-VLSVVVILLIPF 382 (406)
Q Consensus 305 ~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~ 382 (406)
.....+.......+.+|.+|.+.|+++.|+.++.+.+|+.++|.+.+.+.+..+....+...+.++ +++.+...+..|
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (496)
T PRK03893 377 QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLIGLDMP 455 (496)
T ss_pred HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 122233345556778899999999999999999999999999999988877665444444444333 333333333333
No 27
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=8.9e-23 Score=200.05 Aligned_cols=330 Identities=15% Similarity=0.154 Sum_probs=192.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~-----a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
+||+.+..+.++..++..+.++ ++|++.+++.|+++|++.|.. +....++.|++|+++||+++++++.+.++|.
T Consensus 92 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~ 171 (467)
T PRK09556 92 NTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGG 171 (467)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhh
Confidence 5888888877777766655544 689999999999999988765 4556688999999999999999999999999
Q ss_pred HHHHHhhHHhccc---chhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCC
Q 015488 75 VSEAALAWIVMPI---LTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 150 (406)
Q Consensus 75 ~l~~~l~~~~~~~---~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 150 (406)
++++.++..+... .+||..|.+.+++.++. ++.+++.+|+|+.. +..+ +++.. ++
T Consensus 172 ~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~-~~~~~------~~----------- 230 (467)
T PRK09556 172 AGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGK-AEEIF------GE----------- 230 (467)
T ss_pred hHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCC-hhhcc------cC-----------
Confidence 9998887654432 26999998887776655 34445567776521 1000 00000 00
Q ss_pred CCCCcccccccCCccccchhhhccccccccccchhh--hccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015488 151 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFL--MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 228 (406)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 228 (406)
...++.++.++++. . .+ ..+. .+.++.. +...+..+.....+++...|.|.+..+.-
T Consensus 231 ---~~~~~~~~~~~~~~--------~-~~---~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~p~yl~~~~-- 289 (467)
T PRK09556 231 ---PISEEDKETESTDM--------T-KW---QIFVEYVLKNPVI----WLLCFANIFLYIVRIGIDNWSPVYAFQEL-- 289 (467)
T ss_pred ---ccchhhhccccccC--------c-HH---HHHHHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcc--
Confidence 00000000000000 0 00 0000 1122222 22233333344445555555554321110
Q ss_pred CcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHhh-hhhHHHHHHHHHHHH
Q 015488 229 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVTL-QSNILLTALLSGARM 306 (406)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 306 (406)
+..............++.++|.+++|+++||+|||+.+........+.... .... .+........+...+
T Consensus 290 --------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 290 --------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGF 361 (467)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 011111122233445678899999999999999988765543322222111 1111 122122122222222
Q ss_pred HhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhH-HHHHHHHHHHHHhh------------hchhhHHHHHHHHHHHHH
Q 015488 307 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVT------------SCHQTAAILLLEALIVLS 373 (406)
Q Consensus 307 ~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~-g~~~~p~~~~~l~~------------~~~~~~~~~~~~~~~~i~ 373 (406)
+..+.....+....|.+|++.|+++.|+.+.++++ |++++|.+.+.+.+ ..+....|.+++++++++
T Consensus 362 ~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~ 441 (467)
T PRK09556 362 LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGC 441 (467)
T ss_pred HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHH
Confidence 22233333345667999999999999999999997 67899999999888 344445566777777777
Q ss_pred HHHHHhc
Q 015488 374 VVVILLI 380 (406)
Q Consensus 374 ~~~~~~~ 380 (406)
.+..+++
T Consensus 442 ~~~~~~~ 448 (467)
T PRK09556 442 ICLMAIV 448 (467)
T ss_pred HHHHHHH
Confidence 6665554
No 28
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=2.2e-21 Score=185.93 Aligned_cols=305 Identities=15% Similarity=0.122 Sum_probs=191.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++++++++++|++.++++|+++|++.+.. +....++.|++|+++|++..++...+..+|..+++.
T Consensus 72 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~ 151 (390)
T PRK03545 72 ERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLP 151 (390)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhh
Confidence 6999999999999999999999999999999999999988765 345667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.|++.++..++.. +.+..+||.|+. + ++..+
T Consensus 152 l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~----~--~~~~~----------------------------- 196 (390)
T PRK03545 152 LGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE----H--SGSLK----------------------------- 196 (390)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----C--cchHH-----------------------------
Confidence 99888888899999999887766653 344456765430 0 00000
Q ss_pred cccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccCCCCCccccccc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLL-ASELSGSQSKCSSSILLSE 236 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~ 236 (406)
+..+.+ +++.+..... .+.....+++...+ .+.+....
T Consensus 197 -------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~----------- 236 (390)
T PRK03545 197 -------------------------SLPLLFRRPALVSLYLL----TVVVVTAHFTAYSYIEPFVQQVA----------- 236 (390)
T ss_pred -------------------------HHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 000111 1222211111 11111112211111 12221100
Q ss_pred CccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015488 237 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 316 (406)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
+..............++++++.++.+++.||.+||.......+.............+............+...+......
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 316 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQ 316 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHH
Confidence 00011112223344567889999999999999988754443322222222111222222221112121122222223344
Q ss_pred hhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 317 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 317 ~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
....|..| +.|+++.|+.+...++|..++|.+.+.+.+..+....+...+.+.+++.++..+..
T Consensus 317 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 317 VKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 55667777 57899999999999999999999999888877666667777777777766665554
No 29
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.91 E-value=8.4e-22 Score=188.36 Aligned_cols=293 Identities=20% Similarity=0.263 Sum_probs=183.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~--------~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+||+.+..+.++..++..+.++++++. .+++.|+++|++.|.. +....++.|+.|+++|++..+..+.+..
T Consensus 63 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 142 (394)
T TIGR00883 63 GRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAP 142 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHH
Confidence 699999999999999999999999976 5899999999998875 4456788999999999999999999999
Q ss_pred HHHHHHHHhhHHhc--------ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|.++++.++..+. +.++||+.|++.++..++..+....+||+|++...+++. +
T Consensus 143 ~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-- 204 (394)
T TIGR00883 143 VGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH----------------K-- 204 (394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc----------------c--
Confidence 99999888765542 356899999998877766666667788887642110000 0
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 223 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (406)
+ +++ +..+.++++ ++.........+.....++....+.|.+..
T Consensus 205 -------------~-----~~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (394)
T TIGR00883 205 -------------K-----KRG------------------PIRETLTKH-RKPFLLGLGLVIATTTTFYLITTYLPTYLT 247 (394)
T ss_pred -------------c-----ccC------------------CHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 000111111 111222222233333334433333333321
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH-H-HHHhh-hhh-HHHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL-L-PLVTL-QSN-ILLTA 299 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~-~-~~~~~-~~~-~~~~~ 299 (406)
+. .+..............+...++..+.+++.||+|||+.+.....+..+.. . ..... .+. .....
T Consensus 248 ~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 248 QT----------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred Hh----------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 10 00111112223334456678888999999999999997765443333222 1 11111 111 22211
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHh-HHHHHHHHHHHHHhhhch
Q 015488 300 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~-~g~~~~p~~~~~l~~~~~ 358 (406)
......+......+....+.+|.+|++.|+++.|+.+.++. +|+.++|.+.+.+.+..+
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 12222222233456678888999999999999999776654 678899999988877655
No 30
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.4e-21 Score=178.25 Aligned_cols=307 Identities=20% Similarity=0.234 Sum_probs=199.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
.||+.++....++.++++++++++||++++++|++.|++-|... ....+..+..|+++|+++++....+..++.+++.+
T Consensus 76 ~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvP 155 (394)
T COG2814 76 ERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVP 155 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhcc
Confidence 39999999999999999999999999999999999999998864 45667789999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++.++.+.+|||..|++.+..+++. +..+..+| |+-.. + ..
T Consensus 156 LGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~---------------------~---------------~~ 197 (394)
T COG2814 156 LGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS---------------------G---------------SL 197 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC---------------------C---------------CC
Confidence 9999999999999999988887776 45677888 33000 0 00
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+.+ ..+....+.+|+.+.......+.+. ..+..| .+..|.+.+.. ..
T Consensus 198 --~~~-----------------~~~~~~~l~~p~v~~~l~~t~l~~~-g~F~~f--tYi~P~L~~v~-----------g~ 244 (394)
T COG2814 198 --PGP-----------------LRTLLRLLRRPGVLLGLLATFLFMT-GHFALY--TYIRPFLESVA-----------GF 244 (394)
T ss_pred --Ccc-----------------hhHHHHHhcCchHHHHHHHHHHHHc-chhhhH--HhHHHHHHHcc-----------CC
Confidence 000 0001222333444433333222222 222222 23344443211 11
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
............++++++|.+++|.+.|| +.|+.+........+.+..+.. ..+............+..........+
T Consensus 245 s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~ 323 (394)
T COG2814 245 SVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQT 323 (394)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 12234455666778899999999999999 7777776654444444443333 233322222222221111111122334
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
..++ .-++.+..+.++....-++|..++..+.+.+++..+......+-+...+++.+.....
T Consensus 324 ~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 324 RLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred Hhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 4455 3357789999999999999999999998888887554444444445555555444433
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=3.3e-21 Score=184.72 Aligned_cols=313 Identities=16% Similarity=0.098 Sum_probs=200.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||+.+..+.++..++.+.+++++|++.+++.|+++|+|.|... ....++.|+.| ++|+++++.+..+...|..+++.
T Consensus 72 G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~ 150 (393)
T PRK09705 72 SERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAA 150 (393)
T ss_pred CchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999988754 34556788887 78999999999999999999988
Q ss_pred hhHHhcccc-hhHHHHHHhhHHHHHHHHHHHhccC-CcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 80 LAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPE-SPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 80 l~~~~~~~~-~Wr~~f~i~~ip~~~~~~~~~~~pE-Sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
+...+.+.. +||+.+.+.+++.++..+.++...+ .|+ ++ .++
T Consensus 151 ~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~--------~~~ 194 (393)
T PRK09705 151 ITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA----------------------------SS--------HKT 194 (393)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc----------------------------cc--------cCC
Confidence 887766654 8999887766665544433322211 110 00 000
Q ss_pred ccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 158 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+ .. ....+++++.+ .+.+.++.....+++...+.|.+..+.+
T Consensus 195 -----~-~~-----------------~~~~l~~~~~~----~l~~~~~~~~~~~~~~~~~lp~~l~~~g----------- 236 (393)
T PRK09705 195 -----T-TT-----------------PVRVVFTPRAW----TLGVYFGLINGGYASLIAWLPAFYIEIG----------- 236 (393)
T ss_pred -----C-cC-----------------CcccccCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------
Confidence 0 00 00011122222 1222223334455555555544432211
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIAN 316 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
..............++.++|.++.+++.||.|||+....+..+..+....+.. ..+...... ....+...+.++...
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~l~g~g~g~~~~~~~ 314 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWA--MVCGLGLGGAFPLCL 314 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHH--HHHHHhccchHHHHH
Confidence 01111122334455778899999999999999998887765554443332222 221111111 111122223334444
Q ss_pred hhccccc-CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchh-hHHHHHHHHHHHHHHHHHHhcccccCCcccc
Q 015488 317 IFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKELV 390 (406)
Q Consensus 317 ~~~~El~-p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~ 390 (406)
....+.+ |++.|+++.|+.+.++++++.++|.+.+++.+..+. ...+.+.++++++..++.+.++|||+++...
T Consensus 315 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK09705 315 LLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWV 390 (393)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhc
Confidence 4445666 468899999999999999999999999998887653 3456666777777777878899999988654
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=2.4e-21 Score=184.10 Aligned_cols=304 Identities=17% Similarity=0.226 Sum_probs=188.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
|||+.++.+.++..++.+++++++|++.+++.|++.|++.|... .......|+.| ++|++..++...+..+|.++++.
T Consensus 66 G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~ 144 (377)
T TIGR00890 66 GPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSP 144 (377)
T ss_pred CccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHH
Confidence 69999999999999999999999999999999999999988653 34456678887 57999999999999999887776
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
+...+.+..+||+.|++.+++.++..+ ..++++|.|+-. .+ ++ .+.++
T Consensus 145 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~-----------~~~~~- 193 (377)
T TIGR00890 145 LITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL-IK------------------TN-----------IEVSV- 193 (377)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc-cc------------------cC-----------cccch-
Confidence 666666677999999998887766544 344555543200 00 00 00000
Q ss_pred cccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+ + .+..+.+ +++.+. .....+...+.......+.+....+. .
T Consensus 194 ----~-~-----------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 236 (377)
T TIGR00890 194 ----K-D-----------------YTVWEMLRTPQFWV----LYLSFFLNAVSGLLLIGLYKPYGQSL-----------G 236 (377)
T ss_pred ----h-h-----------------hhHHHHHcCccHHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----------C
Confidence 0 0 0001111 122221 11111111111111111111111100 0
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIA 315 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
..............+..+++.++.+++.||+|||+.+..+.....+....+....+ ............+......+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 237 LSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 11111222334455677889999999999999999887776665554443332221 1111111111122222233445
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHH
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 373 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 373 (406)
..+.+|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 6678899999999999999999999999999999988877666555666666665554
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.90 E-value=4.1e-21 Score=187.53 Aligned_cols=336 Identities=16% Similarity=0.203 Sum_probs=189.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc----ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a----~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
+||+.++.+.++.+++.++.+++ .++..+++.|++.|++.|.. +.....+.|++|+++||+.+++++.+..+|..
T Consensus 91 g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 91 NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 68999999999999998888775 37889999999999988765 33455678999999999999999999998864
Q ss_pred H-HHHhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 76 S-EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 76 l-~~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
+ ++.+...+....+||+.|++.+++.++. ++..+++||+|+....+ ++++. .+ +. ++
T Consensus 171 ~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~-----~~--~~--~~--------- 229 (452)
T PRK11273 171 LPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP---PIEEY-----KN--DY--PD--------- 229 (452)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC---Chhhh-----hh--cc--cc---------
Confidence 4 4443333333459999999988776664 55667789988742111 11000 00 00 00
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 232 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (406)
+.++ ++.++.+ .++.+ ....+ ++.. +...+..+.....+++...+.|.+..+..
T Consensus 230 ~~~~--~~~~~~~-----------~~~~~--~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~P~~l~~~~------ 284 (452)
T PRK11273 230 DYNE--KHEQELT-----------AKQIF--MQYVLPNKLL----WYIAIANVFVYLLRYGILDWSPTYLKEVK------ 284 (452)
T ss_pred cccc--ccCCCcc-----------HHHHH--HHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 0000 0000000 00000 00111 1211 12222222233344555555554432110
Q ss_pred ccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHH-HHHHHHHHHHHHHhh-h-hhHHHHHHHHHHHHH
Q 015488 233 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI-MFIFVCIFLLPLVTL-Q-SNILLTALLSGARMF 307 (406)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 307 (406)
+..............++.+++.+++|+++||+ |||..... ...+..+........ . +..............
T Consensus 285 ----g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 360 (452)
T PRK11273 285 ----HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFL 360 (452)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHH
Confidence 00001112223344566788999999999999 55543322 111111111111111 1 111111111222122
Q ss_pred hhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHH-HHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc-ccccC
Q 015488 308 SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMV-CPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI-PFETK 385 (406)
Q Consensus 308 ~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~et~ 385 (406)
..+.......+..|.+|++.|+++.|+.+..+++|+.+ +|.+.+.+.+..+....|.+++++++++++....+ .+|+|
T Consensus 361 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 361 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred HHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 22222333456679999999999999999999998765 68888888887666666777777777776666544 34444
Q ss_pred C
Q 015488 386 G 386 (406)
Q Consensus 386 ~ 386 (406)
+
T Consensus 441 ~ 441 (452)
T PRK11273 441 H 441 (452)
T ss_pred h
Confidence 3
No 34
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.90 E-value=1.5e-20 Score=180.74 Aligned_cols=311 Identities=15% Similarity=0.066 Sum_probs=189.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc--------ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS--------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a--------~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+||+.++.+.++..++++..+++ .++..+++.|+++|++.+.. +....+..|+.|+++|++..++.+.+..
T Consensus 79 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 158 (399)
T PRK05122 79 GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATY 158 (399)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhh
Confidence 69999999998888777655443 25778999999999998765 3455678899999999999999999999
Q ss_pred HHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCC
Q 015488 72 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 151 (406)
Q Consensus 72 ~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 151 (406)
+|.++++.++..+.+..+||+.+++..+..++..+.....||++. .++
T Consensus 159 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------------- 206 (399)
T PRK05122 159 GALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP---VKG----------------------------- 206 (399)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CCc-----------------------------
Confidence 999999999988888889999988766554443333222233211 000
Q ss_pred CCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015488 152 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 231 (406)
++. +....+ ++.++..... . ...+.+.....+.+....+.+
T Consensus 207 -----------~~~------------------~~~~~~-~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~----- 247 (399)
T PRK05122 207 -----------ERL------------------PFRRVL-GRVWPYGMGL-A---LASIGFGTIATFITLYYAARG----- 247 (399)
T ss_pred -----------cch------------------hHHHHH-HHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHcc-----
Confidence 000 000000 0111111111 1 111122222222221111100
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 311 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (406)
..... .......++.+++.+..+++.||+|||+.+..+..+..+....+....+............+.....
T Consensus 248 ------~~~~~--~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 319 (399)
T PRK05122 248 ------WDGAA--LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV 319 (399)
T ss_pred ------cccch--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHH
Confidence 00111 1122334566788899999999999999887766555554443333232222222112222222233
Q ss_pred hhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015488 312 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 391 (406)
Q Consensus 312 ~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 391 (406)
++.......|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++++++.+...++. ++++++.+|
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY-RRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc-ccccccCCC
Confidence 4444456678999999999999999999999888888888887766666667777777777776666554 444444443
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=3.1e-21 Score=189.19 Aligned_cols=326 Identities=15% Similarity=0.162 Sum_probs=192.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhh--cccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAF--SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 77 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~--a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 77 (406)
+||+.+..+.++.+++.+++.+ ..++..+++.|+++|++.|... ....++.|+.|+++|++..++...+..+|.+++
T Consensus 104 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~ 183 (465)
T TIGR00894 104 VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIF 183 (465)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999888887644 3568899999999999998764 566789999999999999999999999999999
Q ss_pred HHhhHHhccc-chhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCc
Q 015488 78 AALAWIVMPI-LTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 155 (406)
Q Consensus 78 ~~l~~~~~~~-~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (406)
+.+...+.+. .+||+.|++.+++.++..+ .+.+.||+|+... +.++.++ +.+.+..
T Consensus 184 ~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~--~~i~~~~----------------- 241 (465)
T TIGR00894 184 LPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP---CISKFEK--KYINSSL----------------- 241 (465)
T ss_pred HHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC---CCCHHHH--HHHHhhc-----------------
Confidence 9998888777 4999999999888777644 4445678886321 1111111 1111000
Q ss_pred ccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015488 156 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 234 (406)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (406)
+++.++.+ .+. .+++.+ +++. ...++..++....++....|.|.+..+..
T Consensus 242 ~~~~~~~~--------------~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-------- 292 (465)
T TIGR00894 242 QGQKGSTR--------------QSL---PIKAIPKSLPV----WAIWFAIFGHFWLYTILPTYLPTFISWVL-------- 292 (465)
T ss_pred ccccCCCC--------------CCC---CHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 00000000 000 111222 2222 22333334444445555555554432110
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH--------HHHHHHH--HHHHHHHHh-hhhhHHHHHHHHH
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--------TIMFIFV--CIFLLPLVT-LQSNILLTALLSG 303 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~--------~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~ 303 (406)
+...........+..++..++.+++|+++||.++|+.. ..+.... .++.+.... ..+.......+..
T Consensus 293 --g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 370 (465)
T TIGR00894 293 --RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTL 370 (465)
T ss_pred --CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 01111112233344567788999999999998654211 1111111 111111111 1111222222222
Q ss_pred HHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc--h-hhHHHHHHHHHHHHHHHHHHhc
Q 015488 304 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--H-QTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 304 ~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~--~-~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
...+..+.....+....|..|. .++++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.++.++++.++..++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 371 ANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 2222222233344556677776 8999999999999999999999988776542 2 2345666777777776655443
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=3.9e-21 Score=188.55 Aligned_cols=317 Identities=13% Similarity=0.085 Sum_probs=179.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
+||+.+..+.++..++.+++++++|+..+++.|++.|++.+.......++.|++|+++||+.+++.+....+|..+++.+
T Consensus 99 G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 99 GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999887543344568899999999999999877666676666554
Q ss_pred hHHh----cc-----cchhHHHHHHhhHHHHHHHHHHHhccC-CcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCC
Q 015488 81 AWIV----MP-----ILTWRWLLALSAIPAFVLLIFIVFMPE-SPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 150 (406)
Q Consensus 81 ~~~~----~~-----~~~Wr~~f~i~~ip~~~~~~~~~~~pE-Sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 150 (406)
...+ .+ ..+||+.|++.+++.++..+..++++| .|+ ++.++.+ + +
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~-~------------ 233 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK-------K-S------------ 233 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-------h-c------------
Confidence 4322 11 258999999988887766554444443 342 1100000 0 0
Q ss_pred CCCCcccccccCCccccchhhhccccccccccchhhh-ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015488 151 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 229 (406)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 229 (406)
.+.++... .+.+.. +.+++ ++.+++.++......++...+.|.+..+.
T Consensus 234 ---------~~~~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---- 282 (476)
T PLN00028 234 ---------GTMPKDSF--------------SKVLRYGVTNYR----TWILALTYGYSFGVELTMDNIIAEYFYDR---- 282 (476)
T ss_pred ---------CccccccH--------------HHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHhHHHHHHHHh----
Confidence 00000000 001111 11122 22222222222222233333333222110
Q ss_pred cccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHH-------HHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 015488 230 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-------SMTIMFIFVCIFLLPLVTLQSNILLTALLS 302 (406)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
.+...........+..++.+++.+++|+++||++||. .......+.++..+.+....+.......+.
T Consensus 283 ------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 283 ------FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred ------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 0011112223334455778899999999999998762 222222222222222222222222222222
Q ss_pred HHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 303 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
...++..+..+..+.+.+|+.| +.|+++.|+.+..+.+|++++|.+.+ ..+..+....+++.+++.++++++.++.+
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 2222222334556677778765 68999999999999898888887654 11222234567777777788777766654
No 37
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=1.5e-20 Score=182.77 Aligned_cols=336 Identities=16% Similarity=0.209 Sum_probs=192.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc----ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a----~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
+||+.+..+.++..++..+.++. .++..+.+.|++.|++.|.. +....++.|++|+++||+.+++++.+..+|..
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ 168 (438)
T TIGR00712 89 NPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG 168 (438)
T ss_pred CCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH
Confidence 58888898888888888877654 56788899999999988765 34556778999999999999999999999999
Q ss_pred HHHHhhHH-hcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 76 SEAALAWI-VMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 76 l~~~l~~~-~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
+++.+... +....+||+.|++.++..++. ++..+++||+|+....+. .+ +.++ +.+
T Consensus 169 ~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~----------~~~~-~~~---------- 226 (438)
T TIGR00712 169 IPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP-IE----------EYRN-DYP---------- 226 (438)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC-ch----------hccc-ccc----------
Confidence 88876654 333468999999988877664 455667899886421000 00 0000 000
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 233 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (406)
++..++ ++++. ..++.... ..+.++..+.. ....+.....+++...+.|.+..+..
T Consensus 227 --~~~~~~-~~~~~---------~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~l~~~~------- 282 (438)
T TIGR00712 227 --DDYNEK-AEQEL---------TAKEIFMQ-YVLPNKLLWYI----AIANVFVYLLRYGVLDWSPTYLKEVK------- 282 (438)
T ss_pred --cccccc-ccccc---------chHHHHHH-HHccCchHHHH----HHHHHHHHHHHHHHHHhHHHHHHHcc-------
Confidence 000000 00000 00000000 01112222221 11112222333444444444332100
Q ss_pred cccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH--HHHHHH-Hhh--hhhHHHHHHHHHHHHHh
Q 015488 234 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC--IFLLPL-VTL--QSNILLTALLSGARMFS 308 (406)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~--~~~~~~-~~~--~~~~~~~~~~~~~~~~~ 308 (406)
+..............+.++++.+++++++||+++++....+..... +..... ... .+........+...+..
T Consensus 283 ---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 359 (438)
T TIGR00712 283 ---HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLI 359 (438)
T ss_pred ---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 0011111223344556788899999999999954322222211111 111111 111 11111111111111111
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHH-HHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.+..........|.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..+....+.++.+.++++.+..+++.||+|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 360 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 22222223456799999999999999999999875 578999988888666556677777778888888888888876
No 38
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=3e-20 Score=178.22 Aligned_cols=309 Identities=15% Similarity=0.166 Sum_probs=191.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++..+.++++|++.+++.|+++|++.|... ....++.|+.|+++||+..+..+....+|..+++.
T Consensus 70 g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 149 (394)
T PRK03699 70 PLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPI 149 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999887653 45567889999999999999988888899888888
Q ss_pred hhHHhc-ccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVM-PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~-~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
+...+. +..+||+.|.+.+++.++..+..+. .+.|+.. ++ + + ++
T Consensus 150 ~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~--~~--~----------------------------~-~~- 194 (394)
T PRK03699 150 IAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPALG--KH--A----------------------------P-KA- 194 (394)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCcccc--cc--C----------------------------c-cc-
Confidence 776554 4579999999888776655443332 2333200 00 0 0 00
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+.++ .+. .+++ ..+...+..+.....+++...|.|.+..+... .+.
T Consensus 195 --~~~~-------------~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g--------~s~ 240 (394)
T PRK03699 195 --DKPV-------------AKE-------KWGI----GVLFLAIAALLYILAQLTFISWVPEYAQKKFG--------MSL 240 (394)
T ss_pred --cCcc-------------ccc-------cCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCh
Confidence 0000 000 0011 12222222233333444444555544321100 001
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
.+.. .......++..+|.+++++++||++||+.+.....+..+....+....+............++..+.++....+
T Consensus 241 ~~~~--~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 318 (394)
T PRK03699 241 EDAG--NLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITL 318 (394)
T ss_pred HHhh--HHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11223345678899999999999999998877655544433333222222222222222223333445555666
Q ss_pred cccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 319 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 319 ~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
..|..|.+ ++...|.....+.+|+.++|.+.+++.+..+....+...+++++++.+...+..
T Consensus 319 ~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 319 GSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 77777754 677889999999999999999999888766655666666666666655544443
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.88 E-value=1.1e-19 Score=172.99 Aligned_cols=306 Identities=18% Similarity=0.175 Sum_probs=180.3
Q ss_pred CcchhhHH-HHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhH--HHHHHHHHHHHHHH
Q 015488 1 MEEGSILG-GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKW--MVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~-~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~--~~~~~~~~~~G~~l 76 (406)
+||+.++. +.+...++..+.++++|++.+++.|++.|.+.+.. +....+..|+.|+++|++. .+....+.++|.++
T Consensus 61 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 140 (375)
T TIGR00899 61 GDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVI 140 (375)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHH
Confidence 57776554 55556667788899999999999999998766543 3445567788888877654 57777788899999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCc
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 155 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (406)
++.++..+.+..+||+.|++.+++.++..+ ..+.+||+|++...+.
T Consensus 141 g~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 187 (375)
T TIGR00899 141 GPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL--------------------------------- 187 (375)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc---------------------------------
Confidence 999988888788999999999887666544 4456899875310000
Q ss_pred ccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccCCCCCccccc
Q 015488 156 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL-ASELSGSQSKCSSSILL 234 (406)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 234 (406)
++ .+. + . ...+++.+.........+............+ .....
T Consensus 188 ~~----~~~--------------~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------ 231 (375)
T TIGR00899 188 TR----LEV--------------R----G--LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELG------------ 231 (375)
T ss_pred Cc----chh--------------h----h--hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcC------------
Confidence 00 000 0 0 0001111111111112221111111111111 11110
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII 314 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
.................+++..+++++.||+|||+.+..+.+...+....+....+.+..........++.....+.
T Consensus 232 ---~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 308 (375)
T TIGR00899 232 ---LPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308 (375)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111222233455677889999999999999887765544443332222222222222212222222223455
Q ss_pred hhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 315 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 315 ~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
...+..|..|.+ |+++.|+.+...++|+.++|.+.+.+.+..+....+.+.+++++++.+...+
T Consensus 309 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 309 GMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 567778999875 5699999999999999999999988777665555666666776666655433
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.88 E-value=1.3e-19 Score=170.39 Aligned_cols=287 Identities=27% Similarity=0.379 Sum_probs=203.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+..+..++..+..+++++..+++.|++.|++.+.. +....++.|+.|+++|++..++.+....+|..+++.
T Consensus 62 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 141 (352)
T cd06174 62 GRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPL 141 (352)
T ss_pred CCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998875 456678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
++..+.+..+||+.+.+.+++.++..+...++| |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------------------------------------- 176 (352)
T cd06174 142 LGGLLAESLGWRWLFLILAILGLLLALLLLFLL--RL------------------------------------------- 176 (352)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HH-------------------------------------------
Confidence 999888888899999998888776655554443 00
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCcc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ 239 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (406)
........+.....+.....+.+....+. .+..
T Consensus 177 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 209 (352)
T cd06174 177 -------------------------------------LLLLALAFFLLSFGYYGLLTYLPLYLQEV----------LGLS 209 (352)
T ss_pred -------------------------------------HHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------cCCC
Confidence 00111111112222222222222221110 0111
Q ss_pred chhhHHHHHHHHhhhhHHHHHHHHHHhhhchHH-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 240 DASVYINVFITSFAELPGLLTAALLVDRVGRKL-SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
............++..++..+.+++.||.|||+ .+..+..+..+.........+............+......+....+
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 289 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTL 289 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHH
Confidence 122333445556778889999999999999999 8877766666555444333322222222222333334456778889
Q ss_pred cccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 319 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 319 ~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
..|..|++.|+++.|+.+...++++.++|.+.+.+.+..+....+.+.+++.+++.+..++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 290 ASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999988877655556777778887777666543
No 41
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=4.3e-19 Score=174.59 Aligned_cols=314 Identities=17% Similarity=0.134 Sum_probs=190.5
Q ss_pred Ccchh-hHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 1 MEEGS-ILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~-~~~~~~~~~i~~~~~~~a---~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
|||+. +..+.+...++..+.++. +++..+.+.|++.|++.+.. .....+..|+.|+++||+..++...++.+|.+
T Consensus 78 Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l 157 (491)
T PRK11010 78 GRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML 157 (491)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH
Confidence 57775 657777777777777665 47888999999999877654 34566789999999999999999999999999
Q ss_pred HHHHhhHHhcc-cchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCC
Q 015488 76 SEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 154 (406)
Q Consensus 76 l~~~l~~~~~~-~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (406)
+++.+...+.+ ..|||..|++.++..++..+..+++||+|+.. .+ ++.
T Consensus 158 lg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~-~~~--------------------------- 206 (491)
T PRK11010 158 VSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV-PKT--------------------------- 206 (491)
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc-ccc---------------------------
Confidence 99998888777 57999999998887777666666688876421 00 000
Q ss_pred cccccccCCccccchhhhccccccccccchhhhccC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015488 155 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 233 (406)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (406)
. ++ .. ...+.++++ ++.+. .....+.+.......+ ....+.+....
T Consensus 207 --~-----~~-~~--------------~~~l~~~~~~~~~~~-~ll~~~l~~~~~~~~~--~~~~~~l~~~~-------- 253 (491)
T PRK11010 207 --L-----EQ-AV--------------VAPLRDFFGRNNAWL-ILLLIVLYKLGDAFAM--SLTTTFLIRGV-------- 253 (491)
T ss_pred --h-----hh-hH--------------HHHHHHHHcCcCHHH-HHHHHHHHHHHHHHHH--HHHHHHHHHhc--------
Confidence 0 00 00 001112222 22222 1111111111111111 11112211100
Q ss_pred cccCccchhhHHHH-HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---HhhhhhHHH-HHHHHHHHHHh
Q 015488 234 LSENVQDASVYINV-FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VTLQSNILL-TALLSGARMFS 308 (406)
Q Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~ 308 (406)
+.......... ....++.++|.+++++++||+|||+.+..+.+...+....+ .....+... ........++.
T Consensus 254 ---G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 254 ---GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCG 330 (491)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 01111111221 23345778999999999999999887766544333322211 111111111 11111111111
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
....+..+.+..++.|.+.+++..|+.++...+|+.+.+.+.+.+.+..+....|.+.+++++++.+..++++
T Consensus 331 g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 331 GMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123445777889999999999999999999999888877888888877665667777788888877766654
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.87 E-value=1.3e-19 Score=171.55 Aligned_cols=292 Identities=13% Similarity=0.126 Sum_probs=182.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc-----cHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP-----NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~-----~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
+||+.++.+.++..++..+..+++ |++.+++.|++.|++.+.. +....++.|+.|+++|++..++.+.+..+|.
T Consensus 62 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 141 (365)
T TIGR00900 62 DRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFY 141 (365)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHH
Confidence 699999999999988888888877 9999999999999988765 3456788999999999999999999999999
Q ss_pred HHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhc--cCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCC
Q 015488 75 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM--PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 152 (406)
Q Consensus 75 ~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~--pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (406)
++++.++..+.+..+||+.|++.+++.++..+..+.+ ||+++. ++.+
T Consensus 142 ~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------------------------- 190 (365)
T TIGR00900 142 IVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS----EIQA--------------------------- 190 (365)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc----cccc---------------------------
Confidence 9999999888888899999998887766554433332 332210 0000
Q ss_pred CCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCCcc
Q 015488 153 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSSS 231 (406)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ 231 (406)
.+ + + ..+ +. + +..+.+++++..+........ ....+++.. .+.|.+..+.
T Consensus 191 --~~----~-~---~~~-~~------~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------ 241 (365)
T TIGR00900 191 --LS----N-A---VLR-DT------R---EGIKFVLKNPLLRTLLLLALL---FNLVFAPAIVALFPYVQSKY------ 241 (365)
T ss_pred --cc----h-h---HHH-HH------H---hHHHHHHcCcHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH------
Confidence 00 0 0 000 00 0 011122222222222211111 111111111 1222221100
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhh
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMG 310 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 310 (406)
.+..............++.+++.++.+++.||.|||+.+..+....++....+....+ ............+....
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (365)
T TIGR00900 242 ----LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP 317 (365)
T ss_pred ----hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 0011112222333445677888999999999999999887765555544443333222 22221222222222233
Q ss_pred hhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 311 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 311 ~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
..+....+..|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678889999999999999999999999999999998877664
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=3.5e-20 Score=176.24 Aligned_cols=308 Identities=17% Similarity=0.229 Sum_probs=178.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH-
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA- 78 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~- 78 (406)
+||+.++.+.++..++.++.+++++++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+.+..+|..+++
T Consensus 58 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 137 (379)
T TIGR00881 58 NPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPP 137 (379)
T ss_pred CCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHH
Confidence 6899999999999999999999999999999999999998875 45667889999999999999999999999999999
Q ss_pred HhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 79 ALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 79 ~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
.+...+.+..+||+.|++.++..++. .+..+..||+|+... +.++. + +. .++.++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~-~~----~~~~~~ 193 (379)
T TIGR00881 138 LVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCG---LPPAE----------------E-MP----NEEPDG 193 (379)
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccc---cCccc----------------c-Cc----cccccc
Confidence 46666666789999999887765554 455567788775211 00000 0 00 000000
Q ss_pred ccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015488 158 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 236 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (406)
. ++.+++ +....+ .....++ ++..+. +.+..+......++...+.|....+. .
T Consensus 194 ~-~~~~~~--------~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 247 (379)
T TIGR00881 194 D-AEKKEE--------ELTKKQ---IFLQYVLLNKVLWY----ISLGYVFVYVVRTGILDWSPLYLTQE----------K 247 (379)
T ss_pred c-cccccc--------cccchH---HHHHHHHhcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH----------h
Confidence 0 000000 000000 0111111 222221 11122222222222222222221100 0
Q ss_pred CccchhhHHHHHHHHhhhhHHHHHHHHHHhhhc-hHHHHH-HHHHHHHHH-HHHHHh--hhhhHHHHHHHHHHHHHhhhh
Q 015488 237 NVQDASVYINVFITSFAELPGLLTAALLVDRVG-RKLSMT-IMFIFVCIF-LLPLVT--LQSNILLTALLSGARMFSMGT 311 (406)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g-rR~~~~-~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 311 (406)
+..............+.++++.++.+++.||.+ ||+... ......... ...... ..+.............+..+.
T Consensus 248 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 327 (379)
T TIGR00881 248 GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGP 327 (379)
T ss_pred CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhh
Confidence 011111222334445677889999999999863 333222 211111111 111111 111111111112222223344
Q ss_pred hhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 312 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 312 ~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
....+.+..|.+|++.|+++.|+.+.++.+|+.++|.+.+.+.+..+
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 328 QMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred hHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 45556788999999999999999999999999999999988877544
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.87 E-value=5.4e-20 Score=181.36 Aligned_cols=333 Identities=13% Similarity=0.152 Sum_probs=191.7
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++..++++++|++.++++|+++|++.|.. +....++.|++|+++|++..+++..+..+|..+++.
T Consensus 65 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 65 GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 6999999999999999999999999999999999999998865 456678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHH------HHHcCCCCCCCCCcCCCC
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKI------AQFNQTSLPSGNLTSDGT 152 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~~~~~~ 152 (406)
++..+.+..+||+.|++.+.+.++. .+..+.+||+++- .+++.|.....+... ...++.+. .+ .
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~-~~------~ 215 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPE-RG------W 215 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCC-CC------C
Confidence 9998888899999999988776655 3445567876541 222223221111100 00000000 00 0
Q ss_pred CCcccccccCCccc-cchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015488 153 NDLDEEFSTSEETP-LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 231 (406)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 231 (406)
.+........-... .......+....+++......+.+++.+...+.. +...+.+++...+.|.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~------ 285 (485)
T TIGR00711 216 FDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYM----SLLGLGLYGSFYLLPLYLQQV------ 285 (485)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHH----HHHHHHHHHHHHHHHHHHHHh------
Confidence 00000000000000 0000000000001111112222333333322222 222233333333333322110
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h--hhh-HHHHHHHHHHHHH
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L--QSN-ILLTALLSGARMF 307 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~ 307 (406)
.+..............++.+++.++++++.||+|||+.+..+..+..+....+.. . ... ...........+.
T Consensus 286 ----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 361 (485)
T TIGR00711 286 ----LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFG 361 (485)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence 0011112223334455677889999999999999999887776655544443331 1 111 1111111111122
Q ss_pred hhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 308 SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 308 ~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
....+........|.+|++.|+++.|+.+....+|+.+++.+.+.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 362 MGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222333445556788999999999999999999999999888877653
No 45
>PRK12382 putative transporter; Provisional
Probab=99.87 E-value=3.5e-19 Score=170.82 Aligned_cols=301 Identities=19% Similarity=0.088 Sum_probs=181.2
Q ss_pred CcchhhHHHHHHHHHHHHH---Hhh-----cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLL---SAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~---~~~-----a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+||+.++.+.+...++.+. .+. .+|++.+++.|+++|++.+.. +....+..|+.|+++|++.+++.+.+..
T Consensus 79 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~ 158 (392)
T PRK12382 79 GAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMY 158 (392)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHH
Confidence 6899999888777665542 222 358899999999999998765 3445678899999999999999999999
Q ss_pred HHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCC
Q 015488 72 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 151 (406)
Q Consensus 72 ~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 151 (406)
+|.++++.++..+.+..+||+.+.+..+..++.+......||.|.. +
T Consensus 159 ~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------------------ 205 (392)
T PRK12382 159 GALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAH---A------------------------------ 205 (392)
T ss_pred HHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCCC---c------------------------------
Confidence 9999999998888778899998877655443333222223332210 0
Q ss_pred CCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015488 152 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 231 (406)
++ + .+ . ++ .. +..++......+. .+.+.....+.+....+.+
T Consensus 206 ----~~-----~-~~-~----------~~---~~-----~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~----- 247 (392)
T PRK12382 206 ----GE-----R-PS-L----------WS---VV-----GLIWKPGLGLALQ----GVGFAVIGTFVSLYFASKG----- 247 (392)
T ss_pred ----cc-----C-ch-H----------HH---HH-----HHHHHhHHHHHHH----HHHHhHHHHHHHHHHHhcC-----
Confidence 00 0 00 0 00 00 0011111111111 1111111111111111100
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 311 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (406)
.... ........++.+++.+..+++.||+|||+.+..+..+..+....+....+............+.....
T Consensus 248 ------~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 248 ------WAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLI 319 (392)
T ss_pred ------Cchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhH
Confidence 0011 11222334556788899999999999998887765555444333332222222111111111222223
Q ss_pred hhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 312 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 312 ~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
.+.......|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++.+++.+...++
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 344556678899999999999999999999999999999988877666566777777777776665544
No 46
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.86 E-value=4.9e-19 Score=170.59 Aligned_cols=313 Identities=16% Similarity=0.113 Sum_probs=191.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
+||+.++.+.++..++..+.++++|++.+++.|++.|++.+..+....++.|..|+++|++..+.......+|.++++.+
T Consensus 82 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (408)
T PRK09874 82 GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLA 161 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999988888899999999999999999755444445567899999999999999999999999999999
Q ss_pred hHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 81 AWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 81 ~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+..+.+..+||+.|++.++..++.. ...+++||.++-. .+.++ .
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------------------- 206 (408)
T PRK09874 162 GGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKEM-L------------------------------- 206 (408)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchhh-h-------------------------------
Confidence 9888777899999998887766543 3445566654210 00000 0
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHH-HHH-HHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLY-FGN-SFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+.++ ....+.+++.+.......... ... ....+. ..+....... ..
T Consensus 207 ---~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~ 254 (408)
T PRK09874 207 ---HMRE-----------------VVTSLKNPKLVLSLFVTTLIIQVATGSIAPIL-TLYVRELAGN-----------VS 254 (408)
T ss_pred ---HHHH-----------------HHHhCcCCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcc-----------ch
Confidence 0000 000111122222111111111 110 000000 0111111100 00
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
..............+..+++....+++.||+|||+.+..+.....+.........+............++.....+....
T Consensus 255 ~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (408)
T PRK09874 255 NIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQT 334 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHH
Confidence 00000011112233555677778899999999999888776655544433332222222212212222222223344555
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
...+..|.+.|++..|+.+.+..+|..++|.+.+.+.+..+....|.+.+++.+++.+..++.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 335 LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 667888999999999999999999999999998888776666667777777777777666554
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.86 E-value=1.6e-18 Score=165.52 Aligned_cols=305 Identities=12% Similarity=0.071 Sum_probs=181.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++.+++++++|++.+++.|++.|++.|... ....++.|+.|+++|++.++....+..+|..+++.
T Consensus 66 g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 145 (382)
T PRK10091 66 SLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIP 145 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhcc
Confidence 68999999999999999999999999999999999999988753 34456789999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.|.+.++..++.. ...+.+||.++ +.+.+ .+
T Consensus 146 l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~~~-~~------------------------------ 190 (382)
T PRK10091 146 LGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAKGG-LR------------------------------ 190 (382)
T ss_pred HHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----ccccC-HH------------------------------
Confidence 98888777899999999887665543 34556787542 00000 00
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCCcccccccC
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+ ..+.+.+++.+. .....+......+... +..+.+.... +
T Consensus 191 -------~-----------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g 231 (382)
T PRK10091 191 -------E-----------------QFHFLRSPAPWL----IFAATMFGNAGVFAWFSYIKPYMMFIS-----------G 231 (382)
T ss_pred -------H-----------------HHHHhcChHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc-----------C
Confidence 0 000111121111 1111111111111111 1111111100 0
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhh-hh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFI-IA 315 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 315 (406)
..............++.+++.++.+++.||+|+|+.+..+..+..+....+.. ..+................+..+ ..
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 11112222334455678899999999999999999887765554443332222 12222211111111111111122 12
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
.....+..|.+.++.+ ..+....+|+.++|.+.+.+.+.. +....+.+.++.+++......++.
T Consensus 312 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 312 ILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 2334455566555554 346667889999999999888753 344455555555555554544444
No 48
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=3.6e-18 Score=163.80 Aligned_cols=115 Identities=20% Similarity=0.273 Sum_probs=98.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++..+..+++++..+++.|+++|++.+... ....++.|..|+++|++..++.+....+|..+++.
T Consensus 66 g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~ 145 (392)
T PRK10473 66 GRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPV 145 (392)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988654 45667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESP 115 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp 115 (406)
++..+.+..+||+.|++.++..++. .+..+.+||++
T Consensus 146 i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 146 LGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9888777789999999887766554 34455677764
No 49
>PRK10504 putative transporter; Provisional
Probab=99.85 E-value=4.1e-18 Score=167.45 Aligned_cols=330 Identities=13% Similarity=0.099 Sum_probs=183.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++.++++++++++.+++.|+++|++.|.. +....++.|+.|+++|++..++.+....+|..+++.
T Consensus 73 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 152 (471)
T PRK10504 73 GVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPA 152 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 6899999999999999998999999999999999999998875 455667889999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHH------HHcCCCCCCCCCcCCCC
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIA------QFNQTSLPSGNLTSDGT 152 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~~ 152 (406)
++..+.+..+||+.|.+......+.. +.....||++. ++.|.|.+.....-.. ..++.+. .. .
T Consensus 153 ~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~ 222 (471)
T PRK10504 153 LGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKG-LG------L 222 (471)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCc-CC------c
Confidence 99888888899999998765544443 33444565442 2223333322111100 0000000 00 0
Q ss_pred CCcccccccC---CccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015488 153 NDLDEEFSTS---EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 229 (406)
Q Consensus 153 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 229 (406)
........-. -.-.....+++.. +++..+.+.+.+++++.......+.+.......+...++.....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 292 (471)
T PRK10504 223 SPLAIAGLVAVGVVALLLYLLHARNN---NRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL------- 292 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC---CCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 0000000000 0000000000000 00001122222333322222122222222111111122211111
Q ss_pred cccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hhhHH-HHHHHHHHHH
Q 015488 230 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNIL-LTALLSGARM 306 (406)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~ 306 (406)
+..............+..+++..+.+.+.||+|||+.+..+..+..+....+... ..... ..........
T Consensus 293 -------g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (471)
T PRK10504 293 -------GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGM 365 (471)
T ss_pred -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH
Confidence 0111112222333345556677889999999999999887766555443333221 11111 1111111112
Q ss_pred HhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc
Q 015488 307 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 357 (406)
Q Consensus 307 ~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~ 357 (406)
.....++.......+.+|.+.|+++.|+.+...++|+.++|.+.+.+++..
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 366 VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222234455677778999999999999999999999999988887766543
No 50
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.85 E-value=3.4e-18 Score=163.85 Aligned_cols=115 Identities=23% Similarity=0.279 Sum_probs=99.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++.+++++++|++.+++.|+++|++.|.. +....++.|++|+++|++..+....+.++|.++++.
T Consensus 83 grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 83 DRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999998875 445667889999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESP 115 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp 115 (406)
++..+.+..+||+.|++.++..++.. ......||+|
T Consensus 163 l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 163 LGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99998888899999998876655543 3334567754
No 51
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.85 E-value=2.9e-18 Score=164.46 Aligned_cols=310 Identities=14% Similarity=0.155 Sum_probs=171.7
Q ss_pred Ccchhh-HHHHHHHHHHHHHHhhcccHHHHHHHHHHhh-ccCCcchhhHHHHHhhcCCCcc--hhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSI-LGGALVTFVAGLLSAFSPNYISLLILRGLAG-AGLGSGHVFFSWFMEFVPPSNR--GKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~-~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G-~g~g~~~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~l 76 (406)
+||+.+ +.+.++..++..+.+++++++.+++.+.+.| .+....+....+..|+.|+++| +...+..+.+.++|.++
T Consensus 79 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 158 (393)
T PRK15011 79 GDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVI 158 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 467664 4556666677777889999998876655544 4433333444566777777666 34557888899999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCc
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 155 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (406)
+++++..+.+..|||..|++.++..++. .+..+.+||+|+- +.+ + +
T Consensus 159 g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~--------------------------~--- 205 (393)
T PRK15011 159 GPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE---LPL-A--------------------------T--- 205 (393)
T ss_pred hhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC---Ccc-c--------------------------c---
Confidence 9999998888889999999888766554 4445567887530 000 0 0
Q ss_pred ccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015488 156 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 235 (406)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (406)
++ .+ .. .+++ ++.+.........+. .++....+.|.+..+.
T Consensus 206 ~~----~~--~~----------~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~---------- 246 (393)
T PRK15011 206 GT----LE--AP----------RRNR---------RDTLLLFVICTLMWG----TNSLYIINMPLFIINE---------- 246 (393)
T ss_pred cc----cc--cc----------cccc---------ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH----------
Confidence 00 00 00 0000 001111111111111 1111112222211100
Q ss_pred cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 015488 236 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA 315 (406)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
.+.................+++.+++|+++||+|||+.+..+.....+....+....+............+......+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111112223345567788999999999999987766544433332222222222211111111111111122334
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
..+..|.+|.+ |+++.++.+...++|+.++|.+.+.+.+..+....+.+.+++++++.+..++. ||+
T Consensus 327 ~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 393 (393)
T PRK15011 327 MLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI-KDV 393 (393)
T ss_pred HHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-cCC
Confidence 55678999975 99999999999999999999999887776555455555566666665554443 443
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.85 E-value=9.7e-18 Score=160.13 Aligned_cols=303 Identities=15% Similarity=0.183 Sum_probs=179.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++.++.+++++++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|..+++.
T Consensus 68 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 147 (385)
T TIGR00710 68 GRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPL 147 (385)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998875 445677899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.+++.++..++. ....+..||+++... + ++..+
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~----------------------------- 194 (385)
T TIGR00710 148 LGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEA---R-IQIST----------------------------- 194 (385)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc---c-CCHHH-----------------------------
Confidence 9988877789999999887766554 334456677653100 0 00000
Q ss_pred cccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
. .+.+...+ +++.+....... .....++....+.|....+. .+
T Consensus 195 --------~--------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~g 238 (385)
T TIGR00710 195 --------Y--------------FETFLLLLKSKMFWGYALIYG----ASFGGFFAFFSGAPFVYIDI----------MG 238 (385)
T ss_pred --------H--------------HHHHHHHHcCchhHHHHHHHH----HHHHHHHHHHHcChHHHHHH----------cC
Confidence 0 00011111 222222111111 11112222222222111100 00
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---h-hhHHH-HHHHHHHHHHhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---Q-SNILL-TALLSGARMFSMGTF 312 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~~~~~~~~~~~~~ 312 (406)
..............+..+++.++.+++.||+|||+.+..+.....+....+... . ..... ........+......
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 239 VSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 111112223334456778899999999999999998776654444332222211 1 11111 111111112222334
Q ss_pred hhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHH
Q 015488 313 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV 375 (406)
Q Consensus 313 ~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 375 (406)
+....+..|.+| +.|+++.++.+.....++.+.+.+.+.+.+ +....+.++...+.+..+
T Consensus 319 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 378 (385)
T TIGR00710 319 SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG--NTAWPMSLSCLVLAVVSV 378 (385)
T ss_pred HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc--cChHHHHHHHHHHHHHHH
Confidence 555667778888 568999999999888755554444443222 223344444444444333
No 53
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=1.6e-17 Score=159.98 Aligned_cols=116 Identities=18% Similarity=0.199 Sum_probs=97.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+..+..++..+.+++++++.+++.|+++|++.+.. +....++.|..|+++|++..+.......+|..+++.
T Consensus 76 g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 155 (406)
T PRK15402 76 GRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPL 155 (406)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999988764 445667889999999999999888888889999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 116 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~ 116 (406)
++..+.+..+||+.|++.++..++..+ ..+.+||+++
T Consensus 156 i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 156 VGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 888877778999999988877666544 4456777654
No 54
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.84 E-value=4.8e-18 Score=167.69 Aligned_cols=332 Identities=12% Similarity=0.067 Sum_probs=184.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhh-cCCCcchhHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEF-VPPSNRGKWMVVFSTFWTFGSVSEA 78 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~-~p~~~Rg~~~~~~~~~~~~G~~l~~ 78 (406)
|||+.++.+.+++.++++++++++|++.++++|+++|+|.|... .....+.+. .|+++|++..+++.....+|..++|
T Consensus 69 Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp 148 (495)
T PRK14995 69 GFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGP 148 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999887643 334445454 5789999999999999999999999
Q ss_pred HhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHH------HHHHHcCCCCCCCCCcCCC
Q 015488 79 ALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILD------KIAQFNQTSLPSGNLTSDG 151 (406)
Q Consensus 79 ~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~------~~~~~~~~~~~~~~~~~~~ 151 (406)
.++..+.+..+|||.|++.....++. .+..+.+||+|+-. +++.|.....+. ......... ...
T Consensus 149 ~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~--~~~----- 219 (495)
T PRK14995 149 LVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTAL--KGF----- 219 (495)
T ss_pred HHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhcc--ccC-----
Confidence 99999988899999999876555544 44556788876421 112221111100 000000000 000
Q ss_pred CCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015488 152 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 231 (406)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 231 (406)
...........--..........+...+.+...+..+.++...... ...+.....+++...+.|......
T Consensus 220 ~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lq~v------ 289 (495)
T PRK14995 220 LSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGV----VMAMTAMITLVGFELLMAQELQFV------ 289 (495)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHH----HHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 0000000000000000000000000011121122222222222111 111222223333333333221100
Q ss_pred cccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--h-hhHHHHHHHHHHHHHh
Q 015488 232 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--Q-SNILLTALLSGARMFS 308 (406)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 308 (406)
.+..............+...++..+.|++.||+|||+.+..+..+..+....+... . +............+..
T Consensus 290 ----~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~ 365 (495)
T PRK14995 290 ----HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSA 365 (495)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhH
Confidence 00111112223334456677888999999999999998877665554433322221 1 1111111122222222
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
....+.......+..|.+.++.+.++.+....+|+.+++.+.+.+++
T Consensus 366 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 366 ASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334455666788999999999999999999999888877776654
No 55
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=3.8e-18 Score=163.36 Aligned_cols=303 Identities=15% Similarity=0.160 Sum_probs=181.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc-----ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS-----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a-----~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
|.|+.+.++.++.++.+.+.+++ +|++.+++.|++.|++ |.. .+....+++++|+++||++.++.....++|.
T Consensus 98 G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~ 176 (462)
T PRK15034 98 GGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGV 176 (462)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHH
Confidence 56888999999999999999987 8999999999999998 444 4556678999999999999999965555666
Q ss_pred HHHHHhhHHhc------------------ccchhHHHHHHhhHHHHHHHHH-HHhccCCcchhhccCChhhHHHHHHHHH
Q 015488 75 VSEAALAWIVM------------------PILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIA 135 (406)
Q Consensus 75 ~l~~~l~~~~~------------------~~~~Wr~~f~i~~ip~~~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~ 135 (406)
.+++.+...+. +..+||...++-.++.++..+. ++.+++.|. .|.+. +
T Consensus 177 ~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~-------~--- 243 (462)
T PRK15034 177 SVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI-------A--- 243 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH-------H---
Confidence 54444332211 1345888887776666555433 333443221 00000 0
Q ss_pred HHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015488 136 QFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV 215 (406)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
.....+++|+.| ++...+++....|.++.
T Consensus 244 -----------------------------------------------~~~~vlk~~~~W----llslly~~tFG~fvg~s 272 (462)
T PRK15034 244 -----------------------------------------------DQLPVLQRLHLW----LLSLLYLATFGSFIGFS 272 (462)
T ss_pred -----------------------------------------------HHHHHhCCCchh----HHHHHHHHHHHHHHHHH
Confidence 001112223322 33333443333444444
Q ss_pred HHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hh-
Q 015488 216 LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQ- 292 (406)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~--~~- 292 (406)
.+.|.+..+. ....+......+..+.+.++..++|+++||+|+|+++..+.+...++...... ..
T Consensus 273 ~~lp~~~~~~------------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 273 AGFAMLAKTQ------------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHH------------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4444332110 00111122233344667778889999999999999988876655554432221 11
Q ss_pred ---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc---------------------chhhHHHhHHHHhHhHHHHHHHH
Q 015488 293 ---SNILLTALLSGARMFSMGTFIIANIFAPEIYPT---------------------SMRSTGAGVAYAVGRIGGMVCPL 348 (406)
Q Consensus 293 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~---------------------~~R~~a~g~~~~~~~~g~~~~p~ 348 (406)
+-.......+...++........+-..+..||. +.-+...|+..+.|.+|+++.|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 111122222222222222345567677888885 14578889999999999999998
Q ss_pred HHHHHhhhchhh-HHHHHHHHHHHHHHHHHHhc
Q 015488 349 VAVGLVTSCHQT-AAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 349 ~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 380 (406)
+++...+..+.+ ..+..+.+..++|.++....
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 888777665543 34666666666666655543
No 56
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=1.3e-17 Score=160.42 Aligned_cols=282 Identities=11% Similarity=0.159 Sum_probs=170.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+..+..++..+.+++++++.+++.|+++|++.+... ....++.|+.|+++|++..+.......+|..+++.
T Consensus 69 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 69 GRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999877643 33456789999999999888888888899999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
++..+.+..+||+.|++.++..++..+..++++|+++. .+.++.+
T Consensus 149 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------------------------- 193 (401)
T PRK11043 149 LGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA----RKQSQDA------------------------------- 193 (401)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc----cccchHH-------------------------------
Confidence 88888788899999998888777665555566665430 0000000
Q ss_pred ccCCccccchhhhccccccccccchhhh-ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
.+++. +.+++++..... .......++....+.|.+.... +.
T Consensus 194 -----------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~-----------g~ 235 (401)
T PRK11043 194 -----------------------LTFKQLLKSKTYLGNVLI----FAACSAAFFAWLTGSPFILEQM-----------GY 235 (401)
T ss_pred -----------------------HHHHHHHcChhHHHHHHH----HHHHHHHHHHHHHHhHHHHHHc-----------CC
Confidence 00111 112222221111 1111122222222233222110 01
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hh-hhhhHHHHHH-HHHHHHHhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VT-LQSNILLTAL-LSGARMFSMGTFI 313 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~-~~~~~~~~~~~~~ 313 (406)
.............++.++|.++++++.||+|+|+..........++...+ .. .......... .....+.....++
T Consensus 236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
T PRK11043 236 SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYP 315 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 11111112223345667788888999999999886644433333322211 11 1111111111 1111122223344
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
.......|..|. .|+++.|+.+.++..++..++.+.+.+.+.
T Consensus 316 ~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 316 IVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 455555677774 699999999999888888888888877654
No 57
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.84 E-value=6.5e-19 Score=165.89 Aligned_cols=285 Identities=25% Similarity=0.380 Sum_probs=177.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++..+..+++|++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+.+..+|.++++.
T Consensus 60 g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 139 (352)
T PF07690_consen 60 GRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPL 139 (352)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccc
Confidence 5889999999999999766667788889999999999998765 456678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.+..+||+.|++.++..++..+ ...+++|+|+....+.+. +++
T Consensus 140 l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~-------------------------------~~~ 188 (352)
T PF07690_consen 140 LGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPK-------------------------------ESE 188 (352)
T ss_dssp HHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST-------------------------------TTT
T ss_pred hhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccccc-------------------------------ccc
Confidence 999988888999999999888777654 345566655421100000 000
Q ss_pred cccCCccccchhhhccccccccccch-hhhccCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSS-FLMLFSP-RFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 236 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (406)
.++ +++..+ ++.++++ ..+ ..+...+...+.++....+.|.+..+. .
T Consensus 189 ---~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~ 237 (352)
T PF07690_consen 189 ---SKK--------------PKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFLPLYLQEV----------L 237 (352)
T ss_dssp -----H--------------HHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHHHCCHH----------H
T ss_pred ---ccc--------------ccccccccccccccchhh----hhhhhhhHHHHHHHHhhcccchhhhhc----------c
Confidence 000 000001 1122211 122 112222222233333444444321100 0
Q ss_pred Ccc-chhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHhhhhh
Q 015488 237 NVQ-DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMGTF 312 (406)
Q Consensus 237 ~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
+.. ............+.++++.++.+++.||+++|+..........+....+.. ..+............+......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (352)
T PF07690_consen 238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVF 317 (352)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 011 122222334445667777899999999999877666554444443333222 1122222222222223333446
Q ss_pred hhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHH
Q 015488 313 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 347 (406)
Q Consensus 313 ~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p 347 (406)
+....+..|.+|++.|+++.|+.+....+++.++|
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 318 PILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77788999999999999999999999999998887
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.84 E-value=1.9e-17 Score=159.32 Aligned_cols=311 Identities=15% Similarity=0.143 Sum_probs=178.2
Q ss_pred CcchhhHHHHHHHHHHHHHH---hh-cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH-
Q 015488 1 MEEGSILGGALVTFVAGLLS---AF-SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS- 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~---~~-a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~- 74 (406)
+||+.+..+..+..+++++. ++ .+++..+++.|++.|+|.+.. +....++.|..|+++||+.+++.+.+.++|.
T Consensus 76 g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 155 (402)
T TIGR00897 76 GPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIG 155 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999988887654 23 358899999999999987654 3345567899999999999999999999997
Q ss_pred HHHHHhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 75 VSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 75 ~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
++++.++..+.+..||+..++......++. .+..+..+|.|+ .+.+
T Consensus 156 ~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------------------ 202 (402)
T TIGR00897 156 VFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT---PQHM------------------------------ 202 (402)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC---cccc------------------------------
Confidence 578888777666678655544332222222 222233333211 0000
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 232 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (406)
++ + ++.... + +..+..+ +|+.+ ...+..+.+...+++...+.|.+..+.+
T Consensus 203 --~~---~-~~~~~~----------~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~g------ 253 (402)
T TIGR00897 203 --QT---R-EKFSEL----------G---KAATILFTNPNVL----LGGMVRIINTIGLFGFAVFLPMFVAELG------ 253 (402)
T ss_pred --cC---C-cchhhH----------H---HHHHHHHcChhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 00 0 000000 0 0011111 22222 2222333344445555555554432111
Q ss_pred ccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHH
Q 015488 233 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT-IMFIFVCIFLLPLVT-----LQSNILLTALLSGARM 306 (406)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 306 (406)
..............++++++.+..++++||+|||+... .+.+...+....+.. ..+............+
T Consensus 254 -----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~ 328 (402)
T TIGR00897 254 -----FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGI 328 (402)
T ss_pred -----CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Confidence 01111112223345678899999999999999887653 222222222111111 1111111111222222
Q ss_pred HhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 307 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 307 ~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
+..+. ........|..| +.|+++.|+.+....+++.++|.+.+.+.+..+....+.+.+++.+++++...|.
T Consensus 329 ~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 329 FLAGY-VPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHH-HHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 22222 222344567766 5799999999999999999999999988887766666777777777777766665
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.84 E-value=1e-18 Score=170.63 Aligned_cols=326 Identities=12% Similarity=0.082 Sum_probs=180.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHH-HHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLI-LRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 78 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~-~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 78 (406)
+||+.++.+.++..++.++++++++++.+++ .|+++|++.|.. .....++.|+.| ++|++..++.+.+..+|..+++
T Consensus 82 g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~ 160 (455)
T TIGR00892 82 GCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLA 160 (455)
T ss_pred CchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHH
Confidence 6899999999999999999999999998875 579999998864 344456678886 7899999999999999999999
Q ss_pred HhhHHhcccchhHHHHHHhhHHHHHHHHHHHhc-cCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 79 ALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM-PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 79 ~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~-pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
.+...+.+..|||+.|++.++..++..+..+++ |+.+... +.+.++ . ++. ++ + .+.
T Consensus 161 ~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~-~---------~~~--~~-----~----~~~ 217 (455)
T TIGR00892 161 PLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKSKS-K---------EGL--PP-----D----GST 217 (455)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccccc-c---------ccC--CC-----C----Ccc
Confidence 988888778899999999988766554433333 3322100 000000 0 000 00 0 000
Q ss_pred ccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 158 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
+ +.+.+. ..++ ..+...+..+.+++++. .....+...+.++....+.+.+..+. +
T Consensus 218 ~--~~~~~~----~~~~----~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~~~-----------g 272 (455)
T TIGR00892 218 K--KLSKKS----TAEK----INRFLDFSLFTHRGFLV----YLSGNVIMFLGFFAPIIFLVPYAKDK-----------G 272 (455)
T ss_pred c--cccccc----hhhh----hhhhcchHHhcCchHHH----HHHHHHHHHHHccchHHHHHHHHHHc-----------C
Confidence 0 000000 0000 00000111222233321 11112222223333332322222111 0
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI--MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFI 313 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (406)
..............++.+++..+++++.||. ++|+.... +.+..++..+......+............+......+
T Consensus 273 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~ 352 (455)
T TIGR00892 273 VDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGA 352 (455)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHH
Confidence 1111112223344566677888899999973 33433322 2222222222222222222222222222222233345
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-hhHHHHHHHHHHHHHHH
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVV 375 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~ 375 (406)
..+.+..|.+|.+.|+++.|+.+....+|++++|.+.+.+.+..+ ....+.+.++..+++++
T Consensus 353 ~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 353 LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 567788899999999999999999999999999999887776553 33445555555555444
No 60
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3.7e-19 Score=171.81 Aligned_cols=301 Identities=18% Similarity=0.250 Sum_probs=173.9
Q ss_pred hhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhH
Q 015488 4 GSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAW 82 (406)
Q Consensus 4 ~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~ 82 (406)
+.+....+.+.+.+++++..+|++.+++.|+++|+..++. +....++.-|+.+++||+.++++..+.++|.++++++++
T Consensus 112 ~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~ 191 (495)
T KOG2533|consen 112 KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAY 191 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHH
Confidence 3456666777777778888999999999999999999887 456667899999999999999999999999999999999
Q ss_pred Hh------cccchhHHHHHHhhHHHHHH-HHHHHhccCCcc--hhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 83 IV------MPILTWRWLLALSAIPAFVL-LIFIVFMPESPR--YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 83 ~~------~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~--~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
.+ ....||||+|++.++..++. ++.++++|+.|. |..++++.+- +.+++++.+..+
T Consensus 192 g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~---~~~~~~~~~~~~------------ 256 (495)
T KOG2533|consen 192 GVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKEL---VVERLRESPSGG------------ 256 (495)
T ss_pred HhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHH---HHHHHHhccCCC------------
Confidence 85 34569999999999887776 567778999998 3332211111 111111111000
Q ss_pred CcccccccCCccccchhhhccccccccccchhh-hccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFL-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 232 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (406)
.++ +.+.+++. .+..|+.|. ..+.+++.....|+...|.|.+..+..
T Consensus 257 -~~~---------------------~~~~~~~~~a~~dp~vw~----~~l~~~~~~lv~~~~~~~lpl~l~~~~------ 304 (495)
T KOG2533|consen 257 -IEN---------------------KFKWKGFKEALKDPGVWP----FSLCYFFLKLVNYGFSYWLPLYLKSNG------ 304 (495)
T ss_pred -ccc---------------------ccCHHHHHHHHhchhHHH----HHHHHHHHhhccccHHHHHHHHHHcCC------
Confidence 000 00011222 223343332 333334444444555555554432200
Q ss_pred ccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhh----hchHHHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHH
Q 015488 233 LLSENVQDASVYINVFITSFAELPGLLTAALLVDR----VGRKLSMTIMFIFVCIFL-LPLVTLQSNILLTALLSGARMF 307 (406)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grR~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (406)
+..............++++++.+++++++|| ..+|........+..... ..+...................
T Consensus 305 ----~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~ 380 (495)
T KOG2533|consen 305 ----GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYG 380 (495)
T ss_pred ----CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchh
Confidence 0001111123344567789999999999999 566665555443333322 2222222111111111111111
Q ss_pred hhhhhhhhhhhcccccCcchhhHHHhHHHHhH-hHHHHHHHHHHHHHhh
Q 015488 308 SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVT 355 (406)
Q Consensus 308 ~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~-~~g~~~~p~~~~~l~~ 355 (406)
.............+....+.|..+....+..+ ..++.++|.+......
T Consensus 381 ~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~a 429 (495)
T KOG2533|consen 381 LIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDA 429 (495)
T ss_pred hHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccC
Confidence 22223445555666666666655555555544 4567777776543333
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.83 E-value=2e-17 Score=158.50 Aligned_cols=317 Identities=11% Similarity=0.036 Sum_probs=187.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++++.++..+++++++++++. ++.|+++|++.+.. +....++.|+.|+++|+++.++.+....+|.+++|.
T Consensus 66 grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~ 142 (393)
T PRK11195 66 PKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTV 142 (393)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999988887777664 78999999998775 556778999999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+++.+.+. .|+..+.+.+...++..+..+.+||+|+.... +.++..+.++...
T Consensus 143 lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~------------------------ 195 (393)
T PRK11195 143 LGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRPG--QSWNPIALLRDFF------------------------ 195 (393)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccc--cCCCHHHHHHHHH------------------------
Confidence 99887664 48888777665555555556778988753110 0000000000000
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTI-LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
...+.+++++..+... ...+.+.......+....+.+...+ .
T Consensus 196 -----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg--------------~ 238 (393)
T PRK11195 196 -----------------------HACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG--------------I 238 (393)
T ss_pred -----------------------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------C
Confidence 0011112222222222 1122222222223333333332211 1
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
.............++.++|++..+.+.||.++|+.+..+... ++....+....+.+..........+............
T Consensus 239 s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~ 317 (393)
T PRK11195 239 TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNAL 317 (393)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 111222233444567788888899999998888777665433 2222222222222212122212222211122334455
Q ss_pred cccccCcch-hhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 319 APEIYPTSM-RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 319 ~~El~p~~~-R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
..|.-|.+. ++.+.++.+....++..++..+... .+..+-...+++.+...+++..+.+.++...++
T Consensus 318 ~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK11195 318 LQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSL-LVKLGVPVVAVIVGFGLLVALAMALLWRWHRRN 385 (393)
T ss_pred HHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567766655 7999999999999998888877664 344555555666666666777777776544333
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=9.7e-17 Score=152.95 Aligned_cols=115 Identities=19% Similarity=0.318 Sum_probs=99.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++..+..+++++..+++.|++.|++.+.. +....++.|+.|+++|++..++.+.+..+|..+++.
T Consensus 54 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 133 (377)
T PRK11102 54 GRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPI 133 (377)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999988765 345667899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESP 115 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp 115 (406)
++..+.+..+||+.|++.++..++. .+..+.+||++
T Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 134 IGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9888877789999999887776654 44556677764
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.81 E-value=3.8e-17 Score=177.44 Aligned_cols=320 Identities=14% Similarity=0.020 Sum_probs=180.6
Q ss_pred CcchhhHHHHHHHHHHHHHH---hhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~---~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
+||+.++++.++..+..++. ..+++++.+++.|+++|++.|.. ++...++.|++|+++|++.+++.+.+..+|.++
T Consensus 75 grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 75 SKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA 154 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence 68999988887666555443 45578999999999999998875 455678999999999999999999999999999
Q ss_pred HHHhhHHhccc---------chhHHHHHHhhHH-HHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCC
Q 015488 77 EAALAWIVMPI---------LTWRWLLALSAIP-AFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 146 (406)
Q Consensus 77 ~~~l~~~~~~~---------~~Wr~~f~i~~ip-~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 146 (406)
++.++..+... .+|++.+.+..+. .++.++..+.+||+|++...+++.
T Consensus 155 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 212 (1146)
T PRK08633 155 GTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDK---------------------- 212 (1146)
T ss_pred HHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccc----------------------
Confidence 99998877654 2455555544433 333445566789887642110000
Q ss_pred CcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChh-hHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhcc
Q 015488 147 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPR-FFKTTILLWVLYFGNSF-VYYGIVLLASELSGS 224 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ 224 (406)
. .... . +.....+..+++++ .+...+...+.++.... ..+...++...+.
T Consensus 213 ---------~---~~~~---~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 264 (1146)
T PRK08633 213 ---------K---KYLF---P-----------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG-- 264 (1146)
T ss_pred ---------c---cccc---H-----------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC--
Confidence 0 0000 0 00000122233322 22222111222221111 1111111111110
Q ss_pred CCCCCcccccccCccch-hhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 015488 225 QSKCSSSILLSENVQDA-SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSG 303 (406)
Q Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
.... ..........++.++|.++.+++.||.++|+.+.++.++.++..+.+....+.....+..+.
T Consensus 265 -------------~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 265 -------------LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred -------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0111 12223344456678899999999999999887776655554444433332222222222222
Q ss_pred HHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHHHHHHHHhccc
Q 015488 304 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVILLIPF 382 (406)
Q Consensus 304 ~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~ 382 (406)
..++..........+..|..|.+.|+++.|+.+.+..+++++++.+.+.+.... +....+.+.+.++++..++.+...|
T Consensus 332 ~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLLLP 411 (1146)
T ss_pred HHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 222222334456778889999999999999999999988877776654333211 1222344444444444444333333
Q ss_pred c
Q 015488 383 E 383 (406)
Q Consensus 383 e 383 (406)
+
T Consensus 412 ~ 412 (1146)
T PRK08633 412 D 412 (1146)
T ss_pred H
Confidence 3
No 64
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.80 E-value=1.6e-16 Score=153.16 Aligned_cols=116 Identities=18% Similarity=0.281 Sum_probs=100.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.+++.++++++++++|++.++++|+++|++.+... ....+..|+.|+++|++.++.......+|..+++.
T Consensus 79 Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 158 (413)
T PRK15403 79 GRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPL 158 (413)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999887543 34556789999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHH-HHHhccCCcc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 116 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~ 116 (406)
++..+.+..+||+.|++.++..++..+ ..+.+||+++
T Consensus 159 lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 159 SGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 998887778999999999888776644 3556888754
No 65
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=8.3e-18 Score=162.02 Aligned_cols=324 Identities=19% Similarity=0.281 Sum_probs=197.5
Q ss_pred cchhhHHHHHHHHHHHHHHhhc--ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015488 2 EEGSILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 78 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a--~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 78 (406)
=|+.+..+.++.+++++++=.+ .+++.+++.|+++|++.|.. ++.......|+|++||++..++...+.++|.+++-
T Consensus 102 ~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~m 181 (466)
T KOG2532|consen 102 ARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITM 181 (466)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788889999999999887444 45668899999999999986 45556778999999999999999999999999999
Q ss_pred HhhHHhccc-chhHHHHHHhhHHHHHHHHH-HHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 015488 79 ALAWIVMPI-LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 156 (406)
Q Consensus 79 ~l~~~~~~~-~~Wr~~f~i~~ip~~~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
++++.+-+. .||+..|++.++.+++..++ +++..|+|+-. .+..+. .++++.+....+
T Consensus 182 p~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h---~~is~~--El~~I~~~k~~~--------------- 241 (466)
T KOG2532|consen 182 PVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH---PNISEK--ELKYIEKGKSEA--------------- 241 (466)
T ss_pred HhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCCHH--HHHHHHhccccc---------------
Confidence 999888776 89999999999998887554 45667888731 111111 112221110000
Q ss_pred cccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015488 157 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 235 (406)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (406)
+.++ ..+- .++.++ ++. .+.+|+..++....++.+..+.|.+..+-
T Consensus 242 ----~~~~------------~~~v---P~~~i~ts~~----vwai~~~~f~~~~~~~~l~~y~PtY~~~V---------- 288 (466)
T KOG2532|consen 242 ----HVKK------------KPPV---PYKAILTSPP----VWAIWISAFGGNWGFYLLLTYLPTYLKEV---------- 288 (466)
T ss_pred ----ccCC------------CCCC---CHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHhhHHHHHH----------
Confidence 0000 0011 122222 232 23345555555555555555555443210
Q ss_pred cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhch--------HHHH-HHHHHHHHHHHHHHHhhh-hhH-HHHHHHHHH
Q 015488 236 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGR--------KLSM-TIMFIFVCIFLLPLVTLQ-SNI-LLTALLSGA 304 (406)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr--------R~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ 304 (406)
++.+..+......+..+...+..+++|.++||.-+ |+.+ .++....+++++.+.+.. .+. .++.++...
T Consensus 289 L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 289 LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIA 368 (466)
T ss_pred hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHH
Confidence 01111222334456667788888999999998855 2333 344444455555444322 122 232222222
Q ss_pred HHHhhhhhhhhhhhccccc-CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc---hhhHHHHHHHHHHHHHHHHHHhc
Q 015488 305 RMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC---HQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 305 ~~~~~~~~~~~~~~~~El~-p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
....+.... ..+..-.- .+++-+...|+++.++.+.++++|.+.+.+.... .....|++.+++.+++.++..++
T Consensus 369 -~~~~g~~~~-Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 369 -IGLSGFNIS-GFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -HHHcccchh-hhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 222222222 22223333 6777899999999999999999999988776321 22345667777777776555444
No 66
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.80 E-value=2.2e-16 Score=150.85 Aligned_cols=300 Identities=16% Similarity=0.132 Sum_probs=173.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++..+.++++|++.+++.|+++|++.|... .....+.|..|+++|++.++.+..+..+|..+++.
T Consensus 69 g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 69 GFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999987653 44456678899999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEF 159 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+...+.+...|...+....+...+..+.....+|++. + ++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~-~~-- 188 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA-------------------------------------E-NH-- 188 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC-------------------------------------C-CC--
Confidence 8887655432322222111111111111111111100 0 00
Q ss_pred ccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCcc
Q 015488 160 STSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQ 239 (406)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (406)
+.++ . ...+.++..+. .....+.. .+.+.....+.|.+..+. +..
T Consensus 189 ---~~~~---------------~--~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~lp~~~~~~-----------g~s 233 (381)
T PRK03633 189 ---DSTS---------------I--WPMLKLRQARL-GVNGCIIS---GIVLGSLYGLMPLYLNHQ-----------GMS 233 (381)
T ss_pred ---CCCC---------------H--HHHHHhcchHH-HHHHHHHH---HHHHHHHHHHHHHHHHHc-----------CCC
Confidence 0000 0 00011122221 11111111 111111111223222111 011
Q ss_pred chhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 015488 240 DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFA 319 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (406)
............+..+++.+..+++.||+|||+.+..+.....+...... .. ........ ..........+......
T Consensus 234 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~-l~g~~~~~~~p~~~~~~ 310 (381)
T PRK03633 234 DASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ-AAMAPALF-ILGAAGFTLYPVAMAWA 310 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh-HHHHHHHH-HHHHHHHhHHHHHHHHH
Confidence 11112223344567788999999999999999988766555444333222 11 11111111 11111223345566677
Q ss_pred ccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHH
Q 015488 320 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 320 ~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 378 (406)
.|..|.+.++.+.+..+....+|+.++|.+.+.+.+..+....|.+.+.+.++..+..+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 311 CEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 89999888777778877777899999999999888876655667777777666654443
No 67
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=4.2e-17 Score=154.30 Aligned_cols=276 Identities=11% Similarity=0.093 Sum_probs=160.0
Q ss_pred Ccchh-hHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 1 MEEGS-ILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~-~~~~~~~~~i~~~~~~~a---~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
||||. ++.+.+...++..+.++. .+...+....++.|++.+.. +....++.|++|+++|++..++...+..+|.+
T Consensus 54 Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~ 133 (356)
T TIGR00901 54 GRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGML 133 (356)
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHH
Confidence 57887 456777777777777777 35555677777777655543 34556789999999999999999999999999
Q ss_pred HHHHhhHHhcccch--------hHHHHHHhhHHHHHHHHHHH-hccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCC
Q 015488 76 SEAALAWIVMPILT--------WRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 146 (406)
Q Consensus 76 l~~~l~~~~~~~~~--------Wr~~f~i~~ip~~~~~~~~~-~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 146 (406)
+++.++..+.+..+ ||..|++.++..++..+..+ ..||+++.. +.+ ++..+
T Consensus 134 ~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~--~~~-~~~~~----------------- 193 (356)
T TIGR00901 134 LSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDA--SVP-KPLTQ----------------- 193 (356)
T ss_pred HHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccc--ccc-hhHHH-----------------
Confidence 99999887766666 99999999887777655544 457753210 000 00000
Q ss_pred CcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 015488 147 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 226 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (406)
+. + ..+..+++++..+......+..+.....++....+.+.+..+.
T Consensus 194 -------------------~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 239 (356)
T TIGR00901 194 -------------------AV-----------L---KPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDM- 239 (356)
T ss_pred -------------------HH-----------H---HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 00 0 0111122111111122222222223333443333333221110
Q ss_pred CCCcccccccCccchhhH-HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--h--------hh-
Q 015488 227 KCSSSILLSENVQDASVY-INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--Q--------SN- 294 (406)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~--------~~- 294 (406)
+....... .......+..++|.++++++.||+|||+.+..+.++..+........ . ..
T Consensus 240 ----------g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (356)
T TIGR00901 240 ----------GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHL 309 (356)
T ss_pred ----------CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchH
Confidence 01111111 11222224567899999999999999988877666555443322221 1 11
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHh
Q 015488 295 ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR 340 (406)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~ 340 (406)
+..........+......+....+..|.+|++.|++..|+.++..+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1111111122223334566778899999999999999999887653
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.79 E-value=1.5e-16 Score=152.74 Aligned_cols=112 Identities=17% Similarity=0.142 Sum_probs=95.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+..+.++..++.++.+++++++.+++.|+++|++.+.. +....++.|+.|+++|++..++.+....+|..+++.
T Consensus 74 g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 153 (400)
T PRK11646 74 GAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGAL 153 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999987654 345567889999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccC
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPE 113 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pE 113 (406)
++..+. .++||+.|++.++..++.. +..++.||
T Consensus 154 l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 154 LGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 988877 6799999998877655543 33445555
No 69
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.79 E-value=1.8e-17 Score=157.33 Aligned_cols=116 Identities=18% Similarity=0.260 Sum_probs=89.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~-~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.++..++.++.++++ +++.+++.|+++|++.+.......++.|+.|+++|++..++...+.++|..+++.
T Consensus 65 g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 144 (366)
T TIGR00886 65 GPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF 144 (366)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence 689999999999999999999999 9999999999999986544445667899999999999999998777777777766
Q ss_pred hhHHhcc----------cchhHHHH-HHhhHHH-HHHHHHHHhccCCcc
Q 015488 80 LAWIVMP----------ILTWRWLL-ALSAIPA-FVLLIFIVFMPESPR 116 (406)
Q Consensus 80 l~~~~~~----------~~~Wr~~f-~i~~ip~-~~~~~~~~~~pESp~ 116 (406)
++..+.. ..+||+.| +..++.. ++..+.....+|+|+
T Consensus 145 i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 145 VMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred HHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 6544322 34899998 4434433 333445556788764
No 70
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=8e-16 Score=148.02 Aligned_cols=116 Identities=18% Similarity=0.086 Sum_probs=90.1
Q ss_pred Ccch-hhHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 1 MEEG-SILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~-~~~~~~~~~~i~~~~~~~a---~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
+||| .++.+.++..++..+.++. .+++.+.+..++.|+..+.. +....+..|+.|+++|++..++...+..+|.+
T Consensus 65 g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i 144 (402)
T PRK11902 65 GRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAML 144 (402)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHH
Confidence 3554 6777888887777777776 35677888887777655443 44566789999999999999999999999999
Q ss_pred HHHHhhHHhccc-chhHHHHHHhhHHHHHHHHHHHhccCCcc
Q 015488 76 SEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPR 116 (406)
Q Consensus 76 l~~~l~~~~~~~-~~Wr~~f~i~~ip~~~~~~~~~~~pESp~ 116 (406)
+++.+...+.+. .|||..|++.++..++..+..+++||+++
T Consensus 145 ~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 145 VSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 999988877764 59999999988776665555667788754
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=5.4e-17 Score=148.93 Aligned_cols=309 Identities=19% Similarity=0.189 Sum_probs=197.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH---HHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI---SLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 77 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~---~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 77 (406)
|-|+..+.+.++..+-.+..+++.+++ .+++.+.+.|++-|...+..++.++++||+++|.+++++. .-++|..+.
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHH
Confidence 347888888999999999998887666 9999999999997766677778999999999999999998 778888777
Q ss_pred HHhhHHhcccch---hHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCC
Q 015488 78 AALAWIVMPILT---WRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 153 (406)
Q Consensus 78 ~~l~~~~~~~~~---Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 153 (406)
..++-.+....+ ||....+-.++.++. .+.++.+.|.|+...+++...
T Consensus 156 q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------------- 207 (417)
T COG2223 156 QLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------------- 207 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc----------------------------
Confidence 777666655566 999988888777775 445566666655210000000
Q ss_pred CcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015488 154 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 233 (406)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (406)
. .+++..++ .++++.+...|+...-.+-++..+.|.+..+..
T Consensus 208 --~--------------------------~~~~~v~~---~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f------- 249 (417)
T COG2223 208 --P--------------------------AQLKAVFS---NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF------- 249 (417)
T ss_pred --h--------------------------hHHHHHhc---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 0 01111111 123344555555444444455555554432211
Q ss_pred cccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHHHH
Q 015488 234 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-------SNILLTALLSGARM 306 (406)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 306 (406)
..+..+.. .......+.+...-.++|+++||+|.|+.+...+....++........ +........+....
T Consensus 250 -g~~~~~Ag--~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~ 326 (417)
T COG2223 250 -GLSPVTAG--LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFV 326 (417)
T ss_pred -CCChhhHH--HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHH
Confidence 01111111 122333344555667899999999888877766665555544433221 12222222333333
Q ss_pred HhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchh-hHHHHHHHHHHHHHHHHHHhc
Q 015488 307 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 307 ~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 380 (406)
+........+-..+..||. .-+...|+..++|.+|++.-|..++...+.++. ...+.++..+++++.+.....
T Consensus 327 ~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 327 FAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333456677788888877 457888999999999999999999888777763 455677777777776654443
No 72
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.77 E-value=8.6e-16 Score=147.79 Aligned_cols=283 Identities=15% Similarity=0.128 Sum_probs=175.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhh---cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~---a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
+||+.++.+.++.+++..+... .+|++.+.+.|++.|+|.|.. ....++..|..|+++|++..++.+.+.++|..+
T Consensus 66 G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~ 145 (410)
T TIGR00885 66 SYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSII 145 (410)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999877543 468999999999999999875 455678889999999999999999999999999
Q ss_pred HHHhhHHhcc--------------------------cchhHHHHHHhhHHHHHHHHHHHh--ccCCcchhhccCChhhHH
Q 015488 77 EAALAWIVMP--------------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAH 128 (406)
Q Consensus 77 ~~~l~~~~~~--------------------------~~~Wr~~f~i~~ip~~~~~~~~~~--~pESp~~l~~~~~~~~a~ 128 (406)
++.+...+.. ..+||++|.+.++..++..+...+ +||.++ ++
T Consensus 146 g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--------~~-- 215 (410)
T TIGR00885 146 GMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH--------SD-- 215 (410)
T ss_pred HHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------cc--
Confidence 9988765521 136999999887766554433322 333211 00
Q ss_pred HHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHH
Q 015488 129 NILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGN 207 (406)
Q Consensus 129 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 207 (406)
+++ .+.++ .....+ +|+.+. ..+..+.+.+.
T Consensus 216 ---------------------------~~~-~~~~~-------------------~~~~~~~~~~~~~-~~l~~f~yvg~ 247 (410)
T TIGR00885 216 ---------------------------AKQ-ISFSA-------------------SLSRLARIRHYRE-GVIAQFFYVGV 247 (410)
T ss_pred ---------------------------ccc-ccchh-------------------hHHHHHhChhHHH-HHHHHHHHHHH
Confidence 000 00000 000111 122222 12222222222
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 015488 208 SFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP 287 (406)
Q Consensus 208 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~ 287 (406)
....+ .+.+....+... .........+.... -....+|.++++++.||+++|+.+..+.+.+.++...
T Consensus 248 e~~~~---s~l~~y~~~~~~-------~~~~~~a~~~~~~~--~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll 315 (410)
T TIGR00885 248 QIMCW---TFIIQYAVRLIP-------GMTAGFAANYNIGA--MVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLG 315 (410)
T ss_pred HHHHH---HHHHHHHhhccC-------CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 22222 112211111000 00001111122121 2456789999999999999999887776666655444
Q ss_pred HHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 288 LVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
.....+... ...+....++....++..+....+.++++.+..+.++..++ +|+.+.|.+.+.+.|.
T Consensus 316 ~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 316 SIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 433222222 22333344556677899999999999998887777777766 8999999999988874
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.76 E-value=2.1e-15 Score=146.33 Aligned_cols=298 Identities=14% Similarity=0.080 Sum_probs=168.2
Q ss_pred CcchhhHHHHHHHHHHHHHH---hhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~---~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
|||+.+..+.+++.++.+++ ++++|++.++++|+++|+|.|... ....++.|+.|+++|++.++..+.++.+|..+
T Consensus 89 G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~ 168 (438)
T PRK10133 89 SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAII 168 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999775 578999999999999999998764 45667788887887777889999999999999
Q ss_pred HHHhhHHhc--c----------------c--------chhHHHHHHh-hHHHHHHHH-HHHhccCCcchhhccCChhhHH
Q 015488 77 EAALAWIVM--P----------------I--------LTWRWLLALS-AIPAFVLLI-FIVFMPESPRYLCTKGRITDAH 128 (406)
Q Consensus 77 ~~~l~~~~~--~----------------~--------~~Wr~~f~i~-~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~ 128 (406)
++.++..+. . . .+||++|+.. .+..++..+ ....+||.|. ++.
T Consensus 169 g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~---- 239 (438)
T PRK10133 169 AVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNH---- 239 (438)
T ss_pred HHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccc----
Confidence 988765332 0 0 2567677543 333333222 2333454211 000
Q ss_pred HHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHH
Q 015488 129 NILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGN 207 (406)
Q Consensus 129 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 207 (406)
++ + ++.+. .+..+.++ +|+.+...+.. +.+.
T Consensus 240 ---------------------------~~---~-~~~~~--------------~~~~~~ll~~~~~~~~~l~~-~~~~-- 271 (438)
T PRK10133 240 ---------------------------SD---A-KQGSF--------------SASLSRLARIRHWRWAVLAQ-FCYV-- 271 (438)
T ss_pred ---------------------------cc---c-cccch--------------hhhHHHHHhCchHHHHHHHH-HHHH--
Confidence 00 0 00000 00111122 23333222111 1111
Q ss_pred HHHHHHHHHHHHhh-hccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 015488 208 SFVYYGIVLLASEL-SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLL 286 (406)
Q Consensus 208 ~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~ 286 (406)
...++...|.+.. ..+. .+..............++.++|..+++++.||+|||+.+..+.++..+.+.
T Consensus 272 -~~~~~~~~~~~~~l~~~~----------~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 272 -GAQTACWSYLIRYAVEEI----------PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCL 340 (438)
T ss_pred -HHHHHHHHHHHHHHhhhc----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 1111111122211 1100 011111122233444567789999999999999999988776555544333
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-hhHHHHH
Q 015488 287 PLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILL 365 (406)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-~~~~~~~ 365 (406)
........ .....+....++....++..+....|.+|.+ .+++.++.. ...+|+.+.|.+.+.+.+..+ ....+++
T Consensus 341 ~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 341 ISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred HHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 22222221 1222223334445566788888888988875 566777775 344677788888887766554 3344544
Q ss_pred HHHH
Q 015488 366 LEAL 369 (406)
Q Consensus 366 ~~~~ 369 (406)
...+
T Consensus 418 ~~~~ 421 (438)
T PRK10133 418 PALC 421 (438)
T ss_pred HHHH
Confidence 3333
No 74
>PRK10054 putative transporter; Provisional
Probab=99.75 E-value=1e-15 Score=146.89 Aligned_cols=299 Identities=12% Similarity=0.083 Sum_probs=171.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.+...++.++.++++|++.++++|++.|.+.+.. +....++.|..|+++|++..++.....++|..+++.
T Consensus 71 g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~ 150 (395)
T PRK10054 71 DKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPP 150 (395)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999888888888899999999999999888765543 345678899999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 158 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
++..+.. .+||..|.+.++..++.. +..+.+||+++ +++.++ . +
T Consensus 151 l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~----~~~~~~-~----------------------------~- 195 (395)
T PRK10054 151 LGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK----AIATET-G----------------------------S- 195 (395)
T ss_pred HHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc----ccccch-h----------------------------h-
Confidence 9887654 689999998877666543 33444665432 000000 0 0
Q ss_pred cccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCc
Q 015488 159 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENV 238 (406)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (406)
+ . + ....+.+|+.+.-.....+..+...........+.+.... ...
T Consensus 196 ----~----~-----~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~ 241 (395)
T PRK10054 196 ----V----W-----S---------PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVAD------------SDF 241 (395)
T ss_pred ----h----h-----h---------hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcc------------cch
Confidence 0 0 0 0000111222211111111111111000011111111100 000
Q ss_pred cchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHhhhhhhhhhh
Q 015488 239 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLT-ALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (406)
.................+.....+.+.||.++|+.+..+..+..+....+....++.... ..............+....
T Consensus 242 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 242 AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 011111122222233445556778899999999988776554444333332221221111 1111111112222345566
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL 369 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~ 369 (406)
...|..|++.|+++.+.. +.+++|..++|.+.+.+.+..+....+.+++.+
T Consensus 322 ~~~~~~p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~ 372 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQ-SLGWLGAAINPLVSGVILTTLPPWSLFVILALA 372 (395)
T ss_pred HHHHhCCcccceehHhHH-HHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHH
Confidence 778899999999998864 467789999999999888866543334444333
No 75
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.75 E-value=8.1e-15 Score=140.68 Aligned_cols=116 Identities=13% Similarity=0.180 Sum_probs=97.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+..+..++.....+++|++.+++.|++.|++.+... ....+..|..|+++|++..+..+.+..+|.++++.
T Consensus 71 grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (394)
T PRK11652 71 GRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPL 150 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999887653 33445679999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcc
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPR 116 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~ 116 (406)
++..+.+..+||+.|++.++..++. .+..++.||+|+
T Consensus 151 i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 151 IGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 9888877789999999987766554 344566788754
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.75 E-value=7.9e-16 Score=166.91 Aligned_cols=291 Identities=9% Similarity=-0.047 Sum_probs=167.0
Q ss_pred CcchhhHH---HHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILG---GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~---~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
+||+.+.. ..+............+|++.++++|+++|++.+.. ++...++.|+.|+++|++++++.+.+.++|.++
T Consensus 80 ~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i 159 (1140)
T PRK06814 80 DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL 159 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH
Confidence 46665432 22222333333344589999999999999988765 566778899999999999999999999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcc
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 156 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
++.+++++....+||+.|+...+..++.++..+++||++.- .+++.
T Consensus 160 gp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------------- 205 (1140)
T PRK06814 160 GTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLK-------------------------------- 205 (1140)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCe--------------------------------
Confidence 99999999888899999966555555555666677776430 00000
Q ss_pred cccccCCccccchhhhccccccccccchhhhccC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015488 157 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 235 (406)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (406)
. +.. ..+. ....+...++ +..+...+..+..++ .++....+.|.+....
T Consensus 206 ~-----~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~---------- 255 (1140)
T PRK06814 206 I-----DRN-IIRS----------TITLLKYAKADKRIWLAILGISWFWL----VGAVVLSQLPLLAKET---------- 255 (1140)
T ss_pred e-----ccc-hHHH----------HHHHHHHHhcCchHHHHHHHHHHHHH----HHHHHHHHhHHHHHHH----------
Confidence 0 000 0000 0001112222 222222221111111 1122222222221100
Q ss_pred cCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--------------------hhhH
Q 015488 236 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--------------------QSNI 295 (406)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--------------------~~~~ 295 (406)
.+..............++.++|.++.++++|+.++++.+..+.++.+++.+.+... .+.+
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 00111112223345557788899999999988776665544433333322211111 1111
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 296 LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
......+...++.........++..+..|.+.|+++.|+.+.+..++..+++.+.+.+.+
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111222222223334567888999999999999999999999999898888776654
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.75 E-value=5.4e-15 Score=142.78 Aligned_cols=326 Identities=12% Similarity=0.055 Sum_probs=174.5
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhH----HHHH----hhcCCCcchhHHHHHHHHHHH
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFF----SWFM----EFVPPSNRGKWMVVFSTFWTF 72 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~----~~~~----E~~p~~~Rg~~~~~~~~~~~~ 72 (406)
||+.+.++.+...++..+..+.+++..+.+.|++.|++.+.. +... .+.. |......|.+..+. +
T Consensus 68 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------l 141 (418)
T TIGR00889 68 AQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------I 141 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------H
Confidence 477888888888888888889999999999999999876543 2222 2222 33333345555542 4
Q ss_pred HHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCC
Q 015488 73 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 152 (406)
Q Consensus 73 G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 152 (406)
|.++++.++..+.....|+..+ +.++..++..+..+.+||+|+- +++.++
T Consensus 142 G~~ig~~l~g~l~~~~~~~~f~-~~~~~~~~~~~~~~~~~e~~~~---~~~~~~-------------------------- 191 (418)
T TIGR00889 142 GFIAAMWAVSLLDIELSNIQLY-ITAGSSALLGVFALTLPDIPVA---KSTAKM-------------------------- 191 (418)
T ss_pred HHHHHHHHHHHhcccchhHHHH-HHHHHHHHHHHHHhcCCCCCCC---cccccc--------------------------
Confidence 5666666665554344576544 4444444444456678988641 000000
Q ss_pred CCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015488 153 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 232 (406)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (406)
+. ++ . . +.. ....+++|+++.-.+..++...... .++ .+..+.+.. .+.. ..
T Consensus 192 ---~~-----~~--~-----~-----~~~--~~~~~k~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-~g~~--~~ 243 (418)
T TIGR00889 192 ---SI-----KV--M-----L-----GLD--AFILFKNKRMAIFFFFSMLLGAPLQ-ITN--IFGNGFLHE-FGRN--PE 243 (418)
T ss_pred ---CH-----HH--H-----h-----hhh--HHHHhcCCCeeeHHHHHHHHHhHHH-HHH--HhHHHHHHH-hccc--cc
Confidence 00 00 0 0 000 0001112222211111111111111 111 111111110 0000 00
Q ss_pred ccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-h---HHHHHHHHHHHHHh
Q 015488 233 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-N---ILLTALLSGARMFS 308 (406)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 308 (406)
. ..............+..+.++++.+..++++||+|||+.+..+.+..++....+..... . ..............
T Consensus 244 ~-~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~ 322 (418)
T TIGR00889 244 F-ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAF 322 (418)
T ss_pred c-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHH
Confidence 0 00000011122334445677888899999999999999998887766655433332111 1 11111111111111
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhHHHH-hHhHHHHHHHHHHHHHhhhch------hhHHHHHHHHHHHHHHHHHHhcc
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGVAYA-VGRIGGMVCPLVAVGLVTSCH------QTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~~~~-~~~~g~~~~p~~~~~l~~~~~------~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
....+....+.+|.+|++.|+++.|+.+. ...+|+.++|.+.+.+.+..+ ....|.+.+++++++++..+++.
T Consensus 323 ~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 323 DFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 22234556778999999999999999974 567899999999998887643 23456777778788888888887
Q ss_pred cccCCcccccc
Q 015488 382 FETKGKELVNT 392 (406)
Q Consensus 382 ~et~~~~~~~~ 392 (406)
+|+++.--.|.
T Consensus 403 ~~~~~~~~~~~ 413 (418)
T TIGR00889 403 KYSHNAIKVDD 413 (418)
T ss_pred CCcccCCCCcc
Confidence 88876644433
No 78
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.74 E-value=3.6e-15 Score=141.00 Aligned_cols=283 Identities=18% Similarity=0.175 Sum_probs=164.6
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.+.++.+...++.++. .+++...+++.|++.|++.|... ....+..|+.| ++|++..+.++.+..+|..+++.
T Consensus 63 g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~ 140 (355)
T TIGR00896 63 GEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAA 140 (355)
T ss_pred CchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHH
Confidence 58999999888888877777 78899999999999999987643 33445678886 68999999999999999999988
Q ss_pred hhHHhcccc--hhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 80 LAWIVMPIL--TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 80 l~~~~~~~~--~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
+...+.+.. +||+.|.+.++..++.. ..++||+++- .+ +++ +.
T Consensus 141 ~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~~~------~~-----------------~~~----------~~ 185 (355)
T TIGR00896 141 ATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVRRR------VA-----------------ANQ----------TT 185 (355)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhccc------cC-----------------CCC----------CC
Confidence 877665543 49999887665544332 2334554320 00 000 00
Q ss_pred ccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015488 158 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 237 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (406)
. + + . ....+.+++.+. ...........+++...+.|.+..+.+
T Consensus 186 ---~-~---------------~-~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lp~~~~~~g----------- 228 (355)
T TIGR00896 186 ---T-R---------------L-T--PVRIWRSPLAWQ----VTVFFGLQSGLYYSLIGWLPAILISHG----------- 228 (355)
T ss_pred ---C-C---------------C-C--CchhhcCHhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcC-----------
Confidence 0 0 0 0 000111222221 111222223344444444443322110
Q ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015488 238 VQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 316 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
..............++.+++.+..+++.||+ +||..+..+..+..+....+....+..... ......+.....++...
T Consensus 229 ~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~ 307 (355)
T TIGR00896 229 ASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLAL 307 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHH
Confidence 1111112233344577889999999999999 556555555444444333332222211111 11111222222334434
Q ss_pred hhcc-cccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 317 IFAP-EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 317 ~~~~-El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
.... +..+++.++...++.+.++.+++.++|.+.+.+.+..+
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 308 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4443 44456778999999999999999999999998877554
No 79
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.73 E-value=4.3e-15 Score=144.51 Aligned_cols=290 Identities=16% Similarity=0.068 Sum_probs=163.3
Q ss_pred Cc-chhhHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhccCCcch-hhHHHHHhhc-CCCcchhHHHHHHHHHH
Q 015488 1 ME-EGSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFV-PPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~r-r~~~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~-p~~~Rg~~~~~~~~~~~ 71 (406)
|| |+.++.+.....++.++..+.++ ...+.+.+++.+++.+... ...++..|.. ++++|++..++.+.+..
T Consensus 67 Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~ 146 (437)
T TIGR00792 67 GKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGAT 146 (437)
T ss_pred CCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHH
Confidence 45 45666787888888877776664 4567778888887766543 2344567877 57899999999888888
Q ss_pred HHHHHHHHhhHHhc-------ccchhHHHHHHhhHHHHHHHH-HHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM-------PILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~-------~~~~Wr~~f~i~~ip~~~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|.++++.+...+. +..+||+.+.+.++..++..+ ..+..||.++.. .
T Consensus 147 ~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~-----~------------------- 202 (437)
T TIGR00792 147 LGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI-----P------------------- 202 (437)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC-----C-------------------
Confidence 88877766544332 246899999988887766543 445566654200 0
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 223 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (406)
+ ++ + ++.+. + +.++.+++++....... ..+...+.++....+.+.+..
T Consensus 203 ~-----------~~---~-~~~~~-----------~---~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 250 (437)
T TIGR00792 203 K-----------NI---E-KKLSL-----------K---QIFKALFKNDQLLILCL---AYLFYNLAFNIKNGVQVYYFT 250 (437)
T ss_pred c-----------cc---c-cCCCH-----------H---HHHHHHhCCHHHHHHHH---HHHHHHHHHHHHcchhheeEe
Confidence 0 00 0 00000 0 01222222222211111 111112222221111111110
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLS 302 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 302 (406)
. . .+.. ........+..+..+++.++.++++||+|||+.+..+..+..+....+....++ ........
T Consensus 251 ~--------~--~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (437)
T TIGR00792 251 Y--------V--LGDP-ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLII 319 (437)
T ss_pred e--------e--cCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 0 0 0001 111122233457778899999999999999998887766555443333322222 22222222
Q ss_pred HHHHHhhhhhhhhhhhcccccC-------cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc
Q 015488 303 GARMFSMGTFIIANIFAPEIYP-------TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 357 (406)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~El~p-------~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~ 357 (406)
...+......+..+.+.+|..| .+.++++.|+.+.+.++|+.+++.+.+.+.+..
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 320 LAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2222223345566777777754 566799999999999999999999988877543
No 80
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.71 E-value=4e-14 Score=135.29 Aligned_cols=285 Identities=13% Similarity=0.026 Sum_probs=163.1
Q ss_pred HHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccchhHHHHHHh
Q 015488 19 LSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALS 97 (406)
Q Consensus 19 ~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~ 97 (406)
....+++++.+++.|.++|.+.+.. +....+..|+ +++|++..+......++|.++++.++..+.+..|||..|.+.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 4456789999999999999877654 3444444554 477899999999999999999999999888888999999887
Q ss_pred hHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccc
Q 015488 98 AIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTV 177 (406)
Q Consensus 98 ~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (406)
.+...+... .+.++|+++ +++.+ + ++ +.++
T Consensus 165 ~~~~~~~~~-~~~~~~~~~----~~~~~----------------------------~-~~---~~~~------------- 194 (382)
T TIGR00902 165 TAGLAFMLI-GFLIKPTIP----PKDAI----------------------------P-ED---ESQG------------- 194 (382)
T ss_pred HHHHHHHHH-HHHcCCCCC----CCccc----------------------------c-cc---cccc-------------
Confidence 654333322 333444321 00000 0 00 0000
Q ss_pred cccccchhhhc-cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhH
Q 015488 178 RKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELP 256 (406)
Q Consensus 178 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (406)
.++.... .+|+.+.-.....+.. .....+++ +.+.+..+. +..............+.+++
T Consensus 195 ----~~~~~~~l~~~~~~~~l~~~~l~~-~~~~~~~~---~~~~~l~~~-----------g~s~~~~g~l~~~~~~~~i~ 255 (382)
T TIGR00902 195 ----DSAFIALLKNPMNLRFLAAVCLIQ-GAHAAYYG---FSAIYWQAA-----------GISASATGLLWGIGVLAEII 255 (382)
T ss_pred ----chhHHHHHcChHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHC-----------CCCHhHHHHHHHHHHHHHHH
Confidence 0011112 2233322222111111 11112222 222121111 01111112223345577788
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHH
Q 015488 257 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY 336 (406)
Q Consensus 257 g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~ 336 (406)
+....+.+.||+|+|+.+..+.+...+....+....+.+........-.+......+....+..+. |.+.|+++.++.+
T Consensus 256 ~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 256 IFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 888999999999999998887777766555444333322222221111122222334445566677 9999999999976
Q ss_pred HhH-hHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHH
Q 015488 337 AVG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 376 (406)
Q Consensus 337 ~~~-~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 376 (406)
... .+|..++|.+.+.+.+..+. ..|.+.+++.+++.++
T Consensus 335 ~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 335 ALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 544 47888899999988877653 4566777777665444
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.71 E-value=5.8e-15 Score=142.93 Aligned_cols=134 Identities=12% Similarity=0.083 Sum_probs=87.8
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhh
Q 015488 250 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 329 (406)
Q Consensus 250 ~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 329 (406)
..+...++.++++++.||+|||+.+..+.++.++.........+.+......................+.+|.+|++.|+
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a 350 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSA 350 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccee
Confidence 34566788999999999999999887766655554443333333322221111111111112233456778999999999
Q ss_pred HHHhH-HHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 330 TGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 330 ~a~g~-~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
++.+. .++.+.+|++++|.+.+.+.+..+....+.+.+++.++..++.++..++
T Consensus 351 ~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 351 TIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98776 4556778999999999988887666667777777777766666655433
No 82
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=4e-17 Score=151.01 Aligned_cols=115 Identities=24% Similarity=0.388 Sum_probs=100.2
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
|+..+..+..++.+++++++++..|+++.++|.+.|+|++.. +...+.+++.+|..+|+++.++++...++|..+|.+.
T Consensus 97 R~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv 176 (493)
T KOG1330|consen 97 RKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV 176 (493)
T ss_pred cceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe
Confidence 888999999999999999999999999999999999999875 5678899999999999999999999999999988877
Q ss_pred hHHhcccch-hHHHHHHhhHHHHHH-HHHHHhccCCcc
Q 015488 81 AWIVMPILT-WRWLLALSAIPAFVL-LIFIVFMPESPR 116 (406)
Q Consensus 81 ~~~~~~~~~-Wr~~f~i~~ip~~~~-~~~~~~~pESp~ 116 (406)
+..+.+..+ |||.|...++.+++. ++.+++.+|.+|
T Consensus 177 gs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 177 GSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 776665444 999999999888776 445666777654
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.68 E-value=5e-14 Score=135.27 Aligned_cols=315 Identities=13% Similarity=0.079 Sum_probs=165.8
Q ss_pred CcchhhHHHHHHHHHHHHHH---hhc-----ccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLS---AFS-----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~---~~a-----~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+||+.++.+.....++.... .+. +....+.+.|++.|++.+.. +....+..|..+ ++++..+......+
T Consensus 66 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~ 143 (396)
T TIGR00882 66 GLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGC 143 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcc
Confidence 68998887766665443321 112 22345677788888887764 334445555433 33445566666678
Q ss_pred HHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHh-ccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCC
Q 015488 72 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 150 (406)
Q Consensus 72 ~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~-~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 150 (406)
+|..+++.++..+.+ .+||++|++.++..++..+..+. .||+|+. ++..+ +
T Consensus 144 ~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----------~--------- 195 (396)
T TIGR00882 144 VGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN-----------A--------- 195 (396)
T ss_pred cHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc-----------c---------
Confidence 888888888776644 59999999988776665443333 4544321 00000 0
Q ss_pred CCCCcccccccCCccccchhhhccccccccccchhhhcc-ChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCC
Q 015488 151 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNS-FVYYGIVLLASELSGSQSKC 228 (406)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 228 (406)
.++ +++++ ..++..+++ +|+.+.-............ ...+...+..+....
T Consensus 196 ----~~~--~~~~~----------------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~----- 248 (396)
T TIGR00882 196 ----LGA--NASAF----------------SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFAT----- 248 (396)
T ss_pred ----ccc--ccCCC----------------CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 000 00000 000111222 2322221111111111111 111111111111100
Q ss_pred CcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 015488 229 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 308 (406)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (406)
.............+..+...++....+.+.||+|||+.+..+..+.++.........+...............
T Consensus 249 -------~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~ 321 (396)
T TIGR00882 249 -------PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEV 321 (396)
T ss_pred -------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 0000011112223344566778889999999999999888776655554333232233222221111111111
Q ss_pred hhhhhhhhhhcccccCcchhhHHHhH-HHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 309 MGTFIIANIFAPEIYPTSMRSTGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 309 ~~~~~~~~~~~~El~p~~~R~~a~g~-~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
.........+..|..|++.|+++.+. .+....+|+.++|.+.+++.+..+....|.+.+++.++.+++..+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 322 PFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 11122344566788999999998877 456778899999999999888777667788888887777766554
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.68 E-value=1.7e-13 Score=130.89 Aligned_cols=282 Identities=9% Similarity=-0.044 Sum_probs=151.5
Q ss_pred HhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccchhHHHHHHhh
Q 015488 20 SAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSA 98 (406)
Q Consensus 20 ~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ 98 (406)
...+++++.+++.|++.|++.+.. +....+..++ +++|++..+.......+|..++|.++..+.+..|||..|++.+
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 345688999999999999876654 3333344455 3567777788888889999999999999888889999998877
Q ss_pred HHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhcccccc
Q 015488 99 IPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVR 178 (406)
Q Consensus 99 ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (406)
+..++..+..+..||.++ +++.+ ++ ..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~------------------------------~~---~~~~-------------- 194 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGESR------------------------------QQ---ESAG-------------- 194 (382)
T ss_pred HHHHHHHHHHHccCCCCC----ccccc------------------------------cc---cccc--------------
Confidence 654444333334454321 00000 00 0000
Q ss_pred ccccchhhhcc-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHH
Q 015488 179 KSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPG 257 (406)
Q Consensus 179 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 257 (406)
+ ++++..+ +|+.+.-.....+.... +.+...+.+.+..+.+ ..............+..+++
T Consensus 195 ~---~~~~~i~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~g-----------~s~~~~g~~~~~~~~~~~~~ 256 (382)
T PRK11128 195 W---PAWKALLKEPTVWRFLLCVSLLQGS----HAAYYGFSAIYWQAAG-----------YSASTIGYLWSLGVVAEVLI 256 (382)
T ss_pred c---chHHHHHcChhHHHHHHHHHHHHHH----hHhHHHHHHHHHHHCC-----------CCHhHHHHHHHHHHHHHHHH
Confidence 0 0111222 23333222212222111 1111111111111100 01111112222444667778
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHH
Q 015488 258 LLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYA 337 (406)
Q Consensus 258 ~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~ 337 (406)
....+++.||+|+|+.+..+.+...+....+....+.+..........+......+....+..+. |.+.+++..++.+.
T Consensus 257 ~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (382)
T PRK11128 257 FAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSA 335 (382)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHH
Confidence 88899999999999998877666555444333333222222211111111111223334455565 45556888888775
Q ss_pred hHh-HHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHH
Q 015488 338 VGR-IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 374 (406)
Q Consensus 338 ~~~-~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 374 (406)
.+. .|..++|.+.+.+.+..+. ..++..+++.+++.
T Consensus 336 ~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 336 LAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 543 5667889999988887654 34555555555443
No 85
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.8e-14 Score=140.72 Aligned_cols=359 Identities=16% Similarity=0.127 Sum_probs=198.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHH-HHhhccCCcchhh-HHHHHhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILR-GLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 78 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R-~l~G~g~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 78 (406)
|.|.+.+.+.++..++.+++.|+++++.+++.- ++.|+|.|..+.. .+.+..+ -+|+|+.+.++...+.++|.++-|
T Consensus 109 g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-F~kkR~lA~Gia~~GsG~G~~~~~ 187 (509)
T KOG2504|consen 109 GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTY-FEKKRALATGIAVSGTGVGTVVFP 187 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhH-hHHHHHHHHhhhhccCCcceeeHH
Confidence 568999999999999999999999998776654 5677888876433 3334444 467899999999999999999999
Q ss_pred HhhHHhcccchhHHHHHHhhHHHHHHHHH-HHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCccc
Q 015488 79 ALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 157 (406)
Q Consensus 79 ~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
.+.-.+.+..|||+.+++.+...+-.++. ...-|.+|+-. .+.++..+. ...+.+..+...+.+....+
T Consensus 188 ~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 257 (509)
T KOG2504|consen 188 PLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK---PNEEKDLRN-------SAASVESTPKPVELRISERD 257 (509)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---chhhhhhcc-------ccccccccccccccccccCC
Confidence 98888888899999999887776554443 33344444321 111111110 00000000000000000000
Q ss_pred ccccCCccccchhhhcccc-ccccccchhhhccChhhHH-HH-HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015488 158 EFSTSEETPLLSSARKRTT-VRKSGFSSFLMLFSPRFFK-TT-ILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 234 (406)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (406)
..............++.++ .+..+.+....+++.+..+ +. +...+......+.++...++.+....+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~--------- 328 (509)
T KOG2504|consen 258 SGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL--------- 328 (509)
T ss_pred CCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------
Confidence 0000000000000000000 0000000111111122221 11 2222222334445555555555443211
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhch--HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGR--KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTF 312 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
...+.......-+.+...++|-++.|++.|+... +.....+.+++++..+......+.......+....++.....
T Consensus 329 --g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~ 406 (509)
T KOG2504|consen 329 --GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFS 406 (509)
T ss_pred --CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 1122222333445567788999999999999874 344455555555544332222222222222222222222233
Q ss_pred hhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhh-HHHHHHHHHHHHHHHHHHhcc
Q 015488 313 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 313 ~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 381 (406)
+....+..|+.+.+.-+.+.|+...+..++..++|.+.+.+.+..+.+ ..|+..+++.++++++.++.+
T Consensus 407 ~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 407 SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 445578899999999999999999999999999998988777776643 456666777777776665554
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.63 E-value=6.4e-13 Score=130.29 Aligned_cols=108 Identities=16% Similarity=0.103 Sum_probs=91.7
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCc---chhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~l 76 (406)
|||+.+.++.++..++.++.++++++..+.+.|++.|+|.|.. +...++.+|++|+++ |++..++++.+.++|.++
T Consensus 77 G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 77 GTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999875 455667889998765 888899999999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHHHHHH
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVLLIFI 108 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~ 108 (406)
++.+...+.+..+||+.|.+.++..++..+.+
T Consensus 157 g~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 157 SPLLAGVIAENYGYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 99999888887899999998775444443333
No 87
>PTZ00207 hypothetical protein; Provisional
Probab=99.62 E-value=3.4e-13 Score=133.03 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=98.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc------ccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a------~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 73 (406)
|||+.+.++.+++.++.++++++ ++++.+++.|++.|+|.+... .....+.+++| ++||++.++...+..+|
T Consensus 89 G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLG 167 (591)
T PTZ00207 89 GPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLG 167 (591)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHH
Confidence 68999999999999999999987 689999999999999977643 34455788986 78999999999999999
Q ss_pred HHHHHHhhHHhcccchhHHHHHHhhHHHHHH-HH--HHHhccCCcchhhccCChhhHHHHHHH
Q 015488 74 SVSEAALAWIVMPILTWRWLLALSAIPAFVL-LI--FIVFMPESPRYLCTKGRITDAHNILDK 133 (406)
Q Consensus 74 ~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~--~~~~~pESp~~l~~~~~~~~a~~~l~~ 133 (406)
..+.+.+...+.. .+|+..|++.++..++. ++ .....||+|+|...+++.+++++..++
T Consensus 168 saI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 168 SAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred HHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 9865544443322 46888777666554443 32 233468888887677666666666444
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.62 E-value=1.3e-12 Score=128.40 Aligned_cols=315 Identities=15% Similarity=0.076 Sum_probs=189.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~-----a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
.||+.++.+.++..+..+..++ ..+.+.+++.-++.|++.+.. +.-.+.+-|..|+++...+.++.+...++..
T Consensus 73 drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar 152 (524)
T PF05977_consen 73 DRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR 152 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH
Confidence 3899999988887665543332 247888999999999987765 4556678899999999999999999999999
Q ss_pred HHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCC
Q 015488 75 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 154 (406)
Q Consensus 75 ~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (406)
++||.+++.+....|=.+.|.+.++..++.......++..++ +++. +.++..+.
T Consensus 153 ~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~~~~-~~e~~~~~--------------------- 206 (524)
T PF05977_consen 153 IIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----PSSL-PRERFFSA--------------------- 206 (524)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----cccc-chhhhhhh---------------------
Confidence 999999998877778888999888765554443333332111 0000 00000000
Q ss_pred cccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015488 155 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 234 (406)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (406)
-++ .++..+..+..+..+.....+......++.+ .|.+..+
T Consensus 207 -----------------------l~~---G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aL---lPl~a~~---------- 247 (524)
T PF05977_consen 207 -----------------------LRE---GLRYVRSSPPLRSVLLRSFLFNLFASAVWAL---LPLFARD---------- 247 (524)
T ss_pred -----------------------HHH---HHHHHhcchHHHHHHHHHHHHHHhhhHHHHh---hhHHHHH----------
Confidence 000 1111222222222222111111111112221 2222110
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII 314 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
..+.............++++++|.++.+.+.+|.++++++..+.+..++.++.+....+.+.....++...++.....+.
T Consensus 248 ~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~ 327 (524)
T PF05977_consen 248 VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSS 327 (524)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111122222334455777888888888888888888777776666665555554444443333333333333344455
Q ss_pred hhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 315 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 315 ~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
..+...+..|.++|++..++..++...+..++..+.+.+.+..+....+.+.++..+++.++....
T Consensus 328 ~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 328 LNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 677788999999999999999998888778888888877776665555555555555555555443
No 89
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.62 E-value=4.8e-13 Score=131.94 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=84.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCc--chhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN--RGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~-~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~l 76 (406)
|||+.++.+.++..++..++++++ +...+.+.|++.|+|.|.. +....++.|++|+++ |+...++++.+.++|..+
T Consensus 86 G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 86 GTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 689999999999999988888874 5667888999999998865 344567889998754 445678888999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHH
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFV 103 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~ 103 (406)
++.+...+.+..|||+.|.+.++..++
T Consensus 166 gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 166 SMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 999999888888999999998764444
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.62 E-value=1e-12 Score=129.01 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=86.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHH-HHHHHHHhhccCCcc-hhhHHHHHhhcCCCc--chhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYIS-LLILRGLAGAGLGSG-HVFFSWFMEFVPPSN--RGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~-l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~l 76 (406)
|||+.++++.+++.++.++++++++... ++++|.++|+|.|.. +...+.+.|.+|+++ |++..+++..++++|..+
T Consensus 79 G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~ 158 (489)
T PRK10207 79 GTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI 158 (489)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH
Confidence 6999999999999999999999887554 558999999999876 455677899999874 577889999999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHH
Q 015488 77 EAALAWIVMPILTWRWLLALSAIP 100 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip 100 (406)
++.++..+.+..|||+.|++..+.
T Consensus 159 g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 159 SLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHHHHHHHHHhhChHHHHHHHHHH
Confidence 999999988888999999987543
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.60 E-value=2.4e-12 Score=123.34 Aligned_cols=259 Identities=13% Similarity=0.030 Sum_probs=140.1
Q ss_pred hHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChh
Q 015488 46 FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRIT 125 (406)
Q Consensus 46 ~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~ 125 (406)
...+..|..++++++...+....+..+|.++++.....+.+..+||..|++.++..++..+..++++|+++- +.+.+
T Consensus 118 ~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~ 194 (390)
T TIGR02718 118 TDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAP 194 (390)
T ss_pred HHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccc
Confidence 344567888888888888888888899999999877777778899999999887766655444555443210 00000
Q ss_pred hHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccC-hhhHHHHHHHHHHH
Q 015488 126 DAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLY 204 (406)
Q Consensus 126 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 204 (406)
+.+ + +.+.++++ |+.+. .....+.+
T Consensus 195 -----------------------------------~~~---------------~---~~~~~~l~~~~~~~-~~~~~~l~ 220 (390)
T TIGR02718 195 -----------------------------------LAR---------------R---ASLFRFFRRPLAWS-LLALALLS 220 (390)
T ss_pred -----------------------------------hhh---------------H---HHHHHHHcCcCHHH-HHHHHHHH
Confidence 000 0 01111222 22222 22222222
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHH-HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 015488 205 FGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFIT-SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCI 283 (406)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~ 283 (406)
.......++.. .+.+.+ . +............. ....+++.++++++.||+|+|+.+..+....++
T Consensus 221 ~~~~~~~~~~~--~~~l~~-~-----------G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 221 AMTAVSGFGLS--KLYLVD-A-----------GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHh--hHHHHh-c-----------CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 22122222211 111111 0 01111111111111 234567788999999999999988776554422
Q ss_pred HHHHHHh-h-----hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc-chhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 284 FLLPLVT-L-----QSNILLTALLSGARMFSMGTFIIANIFAPEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 284 ~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~-~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
....... . ..............+.....++..+....+..++ +.++++.++.++...+|+.++|.+.+.+.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~ 366 (390)
T TIGR02718 287 LALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR 366 (390)
T ss_pred HHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221111 1 0111111111111111122234444555555655 8999999999999999999999999988876
Q ss_pred chhhHHHHHHHHHHHHHHH
Q 015488 357 CHQTAAILLLEALIVLSVV 375 (406)
Q Consensus 357 ~~~~~~~~~~~~~~~i~~~ 375 (406)
.+....|.+.+++.+++.+
T Consensus 367 ~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 367 FGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HccHHHHHHHHHHHHHHHH
Confidence 6554556665555555543
No 92
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.60 E-value=7.9e-12 Score=121.51 Aligned_cols=323 Identities=17% Similarity=0.223 Sum_probs=185.9
Q ss_pred cchhhHHHHHHHHHHHHHHhhc-cc-HHHHHHHHHHhhccCCcchhh-HHHHHhhcCCCcc-------------------
Q 015488 2 EEGSILGGALVTFVAGLLSAFS-PN-YISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNR------------------- 59 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a-~~-~~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p~~~R------------------- 59 (406)
||+.+.+..++..+++.+..+. ++ +....+.-++.-++.+...+. .+++-|+++++++
T Consensus 100 Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~ 179 (477)
T PF11700_consen 100 RKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYE 179 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhh
Confidence 6666666777777777766663 33 333333333333555554443 4578899999988
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHhhHHhc-c-------cchhHHHHHHhhHHHHH-HHHHHHhccCCcchhhccCC
Q 015488 60 -------GKWMVVFSTFWTFGSVSEAALAWIVM-P-------ILTWRWLLALSAIPAFV-LLIFIVFMPESPRYLCTKGR 123 (406)
Q Consensus 60 -------g~~~~~~~~~~~~G~~l~~~l~~~~~-~-------~~~Wr~~f~i~~ip~~~-~~~~~~~~pESp~~l~~~~~ 123 (406)
++..+.-.....+|.++.-.+...+. . ..+-|..+.+.++.-++ .++..+++||.|+--..+..
T Consensus 180 ~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~ 259 (477)
T PF11700_consen 180 AVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG 259 (477)
T ss_pred hHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 88887766666677766655554431 1 22358888888876544 46677788888762000000
Q ss_pred hhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHH
Q 015488 124 ITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVL 203 (406)
Q Consensus 124 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (406)
.+-.....+++.+ .++...+-+.....++.+++
T Consensus 260 ~~~~~~g~~~l~~-----------------------------------------------t~k~~~~~~~~~~fLia~~l 292 (477)
T PF11700_consen 260 SSYLRFGFKRLWR-----------------------------------------------TFKEIRKLRQLFLFLIAYFL 292 (477)
T ss_pred hhHHHHHHHHHHH-----------------------------------------------HHHHHHhChHHHHHHHHHHH
Confidence 0001111111111 01111100111112222232
Q ss_pred HH--HHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchH--HHHHHHHH
Q 015488 204 YF--GNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK--LSMTIMFI 279 (406)
Q Consensus 204 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR--~~~~~~~~ 279 (406)
+. .+.+...+..+....+. ....+.....++..+.+++|+++.+++.||+|.| +++..+.+
T Consensus 293 ~~dg~~ti~~~~~i~a~~~lg---------------~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 293 YSDGVNTIISFAGIYATEVLG---------------MSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---------------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 21 12222222222221221 1223344556677788999999999999999999 67666554
Q ss_pred HHHHH-HHHHH-h------hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHH
Q 015488 280 FVCIF-LLPLV-T------LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 351 (406)
Q Consensus 280 ~~~~~-~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~ 351 (406)
...++ ...+. . ..+.+....+......+..+..+..-++.+|+.|+...+.-+|+-...++..++++|++++
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44332 22222 0 1223333333333334445567778889999999999999999999999999999999999
Q ss_pred HHhhhch-hhHHHHHHHHHHHHHHHHHHhcccccCCc
Q 015488 352 GLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGK 387 (406)
Q Consensus 352 ~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 387 (406)
.+.+.++ ....+....++.+++.++. ...+++|++
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~ 473 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGR 473 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhh
Confidence 8887766 3455666667777776665 444566665
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.59 E-value=1.7e-12 Score=127.39 Aligned_cols=106 Identities=20% Similarity=0.240 Sum_probs=85.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
|||..++++.++..++.+.++.++|...++++-.+.|+|.|........++|..|.|.|+....+.....-.....++.+
T Consensus 106 GRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 106 GRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred cchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 79999999999999999999999999999999999999977665444457899999999877766655554444456666
Q ss_pred hHHhcccchhHHHHHHhhHHHHHHHH
Q 015488 81 AWIVMPILTWRWLLALSAIPAFVLLI 106 (406)
Q Consensus 81 ~~~~~~~~~Wr~~f~i~~ip~~~~~~ 106 (406)
+..+....+|||.|++..+...+.++
T Consensus 186 a~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 186 AQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHhccCCCcchHHHHHHHHHHHHHH
Confidence 66666567999999998876555433
No 94
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.58 E-value=3e-12 Score=118.38 Aligned_cols=274 Identities=13% Similarity=0.102 Sum_probs=155.5
Q ss_pred hcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcc--------------
Q 015488 22 FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-------------- 86 (406)
Q Consensus 22 ~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~-------------- 86 (406)
...+|..+.+.=|+.|.|.+.. ....+|+.+..|++++.+.+++.+.++.+|.+++|.++..+..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999875 5677899999999999999999999999999999999886542
Q ss_pred --cchhHHHHHHhhHHHHHHHHHHH--hccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccC
Q 015488 87 --ILTWRWLLALSAIPAFVLLIFIV--FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 162 (406)
Q Consensus 87 --~~~Wr~~f~i~~ip~~~~~~~~~--~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (406)
..+||+++++.+...++..+.+. .+||.+. +.++ +..++ +..
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~---------------------------~~~~~-~~~ 131 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA---------------------------RVSSG-DTT 131 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc---------------------------ccccc-ccc
Confidence 14799999966554444333333 3455311 0000 00000 000
Q ss_pred CccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchh
Q 015488 163 EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDAS 242 (406)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (406)
+ .+ . .+..|+.+. -.+..+.+.+.-.. ...|.+.+..+... ...+.....
T Consensus 132 ~--------------~~----~--~~~~~~~~l-~~~~~f~yvg~e~~---~~~w~~~yl~~~~~------~g~s~~~a~ 181 (310)
T TIGR01272 132 Q--------------KT----S--AFQFTHLVL-GALGIFVYVGAEVS---AGSFLVNFLSDPHA------LGLPEDQAA 181 (310)
T ss_pred c--------------hh----h--HHhhHHHHH-HHHHHHHHHHHHHH---HHHHHHHHHHhccc------CCCCHHHHH
Confidence 0 00 0 001111111 11112222221111 11222222110000 000111111
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 243 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 243 ~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
. .........++|.++++++.||+|+|+.+..+..++.+............... ......++....++.......+.
T Consensus 182 ~--~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~ 258 (310)
T TIGR01272 182 H--FTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNA 258 (310)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 22333456778999999999999999887776555554443322222221122 22233344556677777788888
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHH
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAIL 364 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~ 364 (406)
+|.+ .+++.++. ..+.+|+.+.|.+.+.+.|..+...++.
T Consensus 259 ~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 259 LGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred hhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 8865 34566664 6788999999999998877666544544
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.53 E-value=5.7e-13 Score=126.00 Aligned_cols=114 Identities=14% Similarity=0.190 Sum_probs=96.5
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 81 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~ 81 (406)
=|+.+..+.+.+++.+++.++++++..|.+.|++.|++.|+..+...++..|+|+++|+++.++...+..+|.+++++++
T Consensus 91 ~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 91 YKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999998876667899999999999999999999999999999998
Q ss_pred HHhcccchhHHHHHHh---hHHHHHHHHHHHhccCCcc
Q 015488 82 WIVMPILTWRWLLALS---AIPAFVLLIFIVFMPESPR 116 (406)
Q Consensus 82 ~~~~~~~~Wr~~f~i~---~ip~~~~~~~~~~~pESp~ 116 (406)
.. ....|||+.+-+. .....+.++.-+++|-.++
T Consensus 171 ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 171 QL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 88 4467899865554 3334445667788884333
No 96
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.53 E-value=1.2e-12 Score=118.45 Aligned_cols=86 Identities=19% Similarity=0.162 Sum_probs=79.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
|||.++.++++..++.-.+-+++.|+..+.+.|++.|+.-|-..+..++++|+.++++|++.++..++++++|.++||.+
T Consensus 96 GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmI 175 (451)
T KOG2615|consen 96 GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMI 175 (451)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchh
Confidence 79999999999999999999999999777788999999999877888899999999999999999999999999999999
Q ss_pred hHHhcc
Q 015488 81 AWIVMP 86 (406)
Q Consensus 81 ~~~~~~ 86 (406)
++.+..
T Consensus 176 Ggyla~ 181 (451)
T KOG2615|consen 176 GGYLAQ 181 (451)
T ss_pred hhHHHh
Confidence 877643
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.49 E-value=1e-12 Score=132.66 Aligned_cols=114 Identities=17% Similarity=0.232 Sum_probs=94.1
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc---------------------------------------------------cHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP---------------------------------------------------NYISL 29 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~---------------------------------------------------~~~~l 29 (406)
+||+.+.++.+++.+++++.++.+ .+..+
T Consensus 96 ~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (633)
T TIGR00805 96 HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLF 175 (633)
T ss_pred CcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhh
Confidence 589999999999999999887763 25678
Q ss_pred HHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccc--------------------
Q 015488 30 LILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-------------------- 88 (406)
Q Consensus 30 ~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~-------------------- 88 (406)
+++|+++|+|.+... ...+++.|++|+++|++..++++....+|.+++++++..+.+.+
T Consensus 176 ~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW 255 (633)
T TIGR00805 176 LVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW 255 (633)
T ss_pred HHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH
Confidence 899999999998864 56778999999999999999999999999999998887654321
Q ss_pred --hhHHHHHHhhHHHHHHHHHHHhccCC
Q 015488 89 --TWRWLLALSAIPAFVLLIFIVFMPES 114 (406)
Q Consensus 89 --~Wr~~f~i~~ip~~~~~~~~~~~pES 114 (406)
+||..|++.++..++..+..+++||.
T Consensus 256 iGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 256 IGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 38888988888877766666677765
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.7e-10 Score=105.93 Aligned_cols=302 Identities=16% Similarity=0.184 Sum_probs=180.5
Q ss_pred CcchhhHHHHHHHHHHHHHHh---hcccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSA---FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~---~a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
++|+.++.+..+++++..+-. -..+|..++++=|+.|.|.|.- ....+|++-..|++.-.+.+.+.+.+.++|.++
T Consensus 76 gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~ 155 (422)
T COG0738 76 GYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAIL 155 (422)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHH
Confidence 578999999999999998774 5678999999999999999975 456778888888888888899999999999999
Q ss_pred HHHhhHHhcc-------------------cchhHHHHHHhhHHHHHHHHHHHh--ccCCcchhhccCChhhHHHHHHHHH
Q 015488 77 EAALAWIVMP-------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDKIA 135 (406)
Q Consensus 77 ~~~l~~~~~~-------------------~~~Wr~~f~i~~ip~~~~~~~~~~--~pESp~~l~~~~~~~~a~~~l~~~~ 135 (406)
+|.+...+.. ...||+++...+...+++.+.... +||-+.
T Consensus 156 gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~------------------- 216 (422)
T COG0738 156 GPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV------------------- 216 (422)
T ss_pred HHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-------------------
Confidence 9998765432 124777777665554444333322 122110
Q ss_pred HHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015488 136 QFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV 215 (406)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (406)
. .+++ .+ + + . ....++++.++++...+..+.+.+.-...+...
T Consensus 217 ---------~---------~~~~---~~----------~----~-~-~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 217 ---------A---------APSL---GA----------S----G-S-AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred ---------c---------cccc---cc----------c----c-c-chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 0 0000 00 0 0 0 012234444444444444555555544443332
Q ss_pred HHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH
Q 015488 216 LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI 295 (406)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~ 295 (406)
.. +..+. ...+.++...+...+. .+.++|-.++.++..|+...+.+....+...+.+.......+ .
T Consensus 260 ~~---y~~~~--------~g~~~~~aa~~~s~~~--~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g-~ 325 (422)
T COG0738 260 VS---YLEEL--------LGLNEQQAAYYLSFFW--VGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG-V 325 (422)
T ss_pred HH---HHHhc--------CCccHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC-h
Confidence 21 11110 0011222222222222 455778888889999998888887765554444443333333 3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHH
Q 015488 296 LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 374 (406)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 374 (406)
.....+....++....++..+....+-.|.+. ..+ |.....+-+||.+.|.+.+.+.|..+....+......|.+..
T Consensus 326 v~~~~l~~ig~F~simfPTIfslal~~l~~~t-s~~-s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 326 VALYALFLIGLFNSIMFPTIFSLALKNLGEHT-SVG-SGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc-ccc-ceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 33334445556667788999999999999433 333 333333447888899999988777665444443444444443
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.43 E-value=1.2e-10 Score=113.69 Aligned_cols=106 Identities=12% Similarity=0.013 Sum_probs=66.8
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h-hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC----
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L-QSNILLTALLSGARMFSMGTFIIANIFAPEIYP---- 324 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p---- 324 (406)
.+..+++..+.+++.||+|+|+.+..+.....+....+.. . .+............+......+..+...+|..+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3556678888899999999999887765544432222222 1 222222222222223333445667888888875
Q ss_pred ---cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 325 ---TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 325 ---~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
.+..+...|+.+.+.++|..++|.+.+.+++.
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23346677888888899999999888876654
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.43 E-value=9.9e-12 Score=121.63 Aligned_cols=305 Identities=12% Similarity=0.009 Sum_probs=155.6
Q ss_pred cchhhHHHHHHHH-HHHHHHhhcccHHHHH-HHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHH---HHHHHHH
Q 015488 2 EEGSILGGALVTF-VAGLLSAFSPNYISLL-ILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFST---FWTFGSV 75 (406)
Q Consensus 2 rr~~~~~~~~~~~-i~~~~~~~a~~~~~l~-~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~---~~~~G~~ 75 (406)
||.-++++.++.. ++....+..++...+. +.+++.+++.+.. .+.-.++.|..+ ++++...+.... ...+|.+
T Consensus 94 Rr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~ 172 (468)
T TIGR00788 94 KRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGL 172 (468)
T ss_pred chHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHH
Confidence 3444455554442 3323333445544444 4888888887664 345567889988 555443333333 3458999
Q ss_pred HHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCc
Q 015488 76 SEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 155 (406)
Q Consensus 76 l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (406)
+++.+++.+.+..+||..|++.+...++..+..+++||++.....+.+.++.. .
T Consensus 173 vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~--------------------------~ 226 (468)
T TIGR00788 173 ISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM--------------------------N 226 (468)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh--------------------------h
Confidence 99999988888789999999887766666566677888642110000000000 0
Q ss_pred ccccccCCccccchhhhccccccccccchhhh-ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015488 156 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 234 (406)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (406)
... .+.. ..+ ..++..++... +.+|..++.....++. |. ..+............
T Consensus 227 ~~~-~~~~---~~~-------~~~~~~~~l~~~l~~~~i~~~l~fifl~-------~~----~~~~~~~~~f~~~~~--- 281 (468)
T TIGR00788 227 MAL-LTLG---VLA-------NVKVQILGLRGAIQLLEIAKPLIFIFLS-------YA----NLPGASGSVFCATTQ--- 281 (468)
T ss_pred hhh-hhhh---HHH-------HHHHHHHHHHHHHhcHHHHHHHHHHHHH-------Hh----hcCCCCceeEEEEcc---
Confidence 000 0000 000 00000111111 1122222211111110 00 001000000000000
Q ss_pred ccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----hh-----hhH-HHHHHHHHH
Q 015488 235 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----LQ-----SNI-LLTALLSGA 304 (406)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~----~~-----~~~-~~~~~~~~~ 304 (406)
..+.............+++.++|....+...+|++.|+++..+.++..+....... .. ++. .........
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 01111122233334455778888888888889999999988877666654432110 00 111 111111111
Q ss_pred HHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 305 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 305 ~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
.+.....+.....+..++.|.+.+++.+++.+++..+|+.+++.+.+.+.+..+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111112234457788999999999999999999999999999987776665544
No 101
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.42 E-value=4.5e-10 Score=108.81 Aligned_cols=336 Identities=15% Similarity=0.092 Sum_probs=176.6
Q ss_pred CcchhhHHH-HHHHHHHHHHHhhcccHHHHH------------HHHHHhhc-----cCCcc-hhhHHHHHhhcCCCcc--
Q 015488 1 MEEGSILGG-ALVTFVAGLLSAFSPNYISLL------------ILRGLAGA-----GLGSG-HVFFSWFMEFVPPSNR-- 59 (406)
Q Consensus 1 ~rr~~~~~~-~~~~~i~~~~~~~a~~~~~l~------------~~R~l~G~-----g~g~~-~~~~~~~~E~~p~~~R-- 59 (406)
|||+.++.. .....++..+.++++++..+. +.+++.|+ +.... ....+++.|.+|+++|
T Consensus 71 GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~ 150 (477)
T TIGR01301 71 GRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRT 150 (477)
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHH
Confidence 688888774 555566667777777654322 24445554 33322 2334578999999865
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhHHhc--cc-------------chhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCC
Q 015488 60 GKWMVVFSTFWTFGSVSEAALAWIVM--PI-------------LTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGR 123 (406)
Q Consensus 60 g~~~~~~~~~~~~G~~l~~~l~~~~~--~~-------------~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~ 123 (406)
+...++.+.+..+|.++++.++.... +. .+-|+.|.+.++..++. .+..+..+|.|... .+++
T Consensus 151 ~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~-~~~~ 229 (477)
T TIGR01301 151 RIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG-SDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc-cccc
Confidence 57888899999999999998876531 10 16789999988776664 44556788876311 0000
Q ss_pred hhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccch-hhhcc-ChhhHHHHHH-H
Q 015488 124 ITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSS-FLMLF-SPRFFKTTIL-L 200 (406)
Q Consensus 124 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~ 200 (406)
.++ +.++ .++.++ ++.+++ +..+. -|+..++..+ .
T Consensus 230 ~~~---------------------------~~~~-~~~~~~--------------~~~~~~i~~~~~~mP~~m~~l~~vq 267 (477)
T TIGR01301 230 INS---------------------------EAAP-PSKHGE--------------EAFFGELFGAFKYLPRPVWILLLVT 267 (477)
T ss_pred hhh---------------------------hccc-ccccch--------------hhhHHHHHHHHHHCCHHHHHHHHHH
Confidence 000 0000 000000 000011 11111 1333333322 2
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhhccCCCCCcccccccCccch---hhHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHH
Q 015488 201 WVLYFGN-SFVYYGIVLLASELSGSQSKCSSSILLSENVQDA---SVYINVFITSFAELPGLLTAALLVDRVGR-KLSMT 275 (406)
Q Consensus 201 ~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~ 275 (406)
++.|++. .+.+|...+...++...... .. ...+++ .. ......++...+.+++-..+.+|+|+ |....
T Consensus 268 ffsW~a~f~~~~y~T~~vg~~v~~~~~~-~~-----~~y~~gvr~G~-~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~ 340 (477)
T TIGR01301 268 CLNWIAWFPFILFDTDWMGREVYGGSVN-QG-----AKYDDGVRAGA-FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWG 340 (477)
T ss_pred HHHHHHHHHHHHhccHHHHHHHcCCCCc-ch-----hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 3333322 11222222222222211100 00 000111 11 11223333444555666778889984 67767
Q ss_pred HHHHHHHHHHHHHHhhhh---------------------hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh--hHHH
Q 015488 276 IMFIFVCIFLLPLVTLQS---------------------NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR--STGA 332 (406)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R--~~a~ 332 (406)
.+.++.++++....+..+ ......+.....+.....++++|.+.+|..|.+.| +.-.
T Consensus 341 ~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~m 420 (477)
T TIGR01301 341 IVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSM 420 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchh
Confidence 776666665554432111 01122222222233344567889999999996545 8888
Q ss_pred hHHHHhHhHHHHHHHHHHHHHhhhch-hh-HHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 333 GVAYAVGRIGGMVCPLVAVGLVTSCH-QT-AAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 333 g~~~~~~~~g~~~~p~~~~~l~~~~~-~~-~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
|+.|.+--+..++.....+.+.+..+ .. ..+.+=++..+++++...++.|.++.
T Consensus 421 gilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 421 GVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999888888887776665544443 22 33445557778888888888887764
No 102
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.41 E-value=3.7e-10 Score=102.19 Aligned_cols=302 Identities=20% Similarity=0.159 Sum_probs=189.0
Q ss_pred chhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchh-hHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 015488 3 EGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 81 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~ 81 (406)
++++.++.++..++.++-... +...++.+-.+.|.|++...+ ...++-|.+|+| -+.+++.|....++|..+++.++
T Consensus 77 er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~la 154 (395)
T COG2807 77 ERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALA 154 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhh
Confidence 345666667777777665555 788899999999999988765 456788888775 67899999999999999999988
Q ss_pred HHhcccc-hhHHHHHHhhHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCCCCcCCCCCCcccccc
Q 015488 82 WIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFS 160 (406)
Q Consensus 82 ~~~~~~~-~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
..+..+. +||....+=++|+++.++.++ |...|.. . ++. + .+
T Consensus 155 vpla~~~~gW~~aL~~WAl~allAl~~Wl--Pq~~r~~-----~------------------~~~-----------~-~~ 197 (395)
T COG2807 155 VPLAQHSGGWRGALGFWALLALLALLIWL--PQALREQ-----A------------------ASI-----------A-TK 197 (395)
T ss_pred hHHHHhhccHHHHHHHHHHHHHHHHHHHh--hhccccc-----c------------------ccc-----------c-cc
Confidence 8876655 799999998999888876654 3322210 0 000 0 00
Q ss_pred cCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccc
Q 015488 161 TSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQD 240 (406)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (406)
. + +-..+++++ ..+-+.+.+..++..||...-|.|.+..+.+.. .
T Consensus 198 ~-----------------~----~~~~vw~~~---~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~s-----------a 242 (395)
T COG2807 198 L-----------------V----SVRKVWRSP---LAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLS-----------A 242 (395)
T ss_pred c-----------------c----cccccccCc---hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-----------H
Confidence 0 0 000111111 122234445567889999999998876543211 1
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 241 ASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
.......-+..+..++.++....+.+|. ++|+..+.......+-...+.+ ..+...... +...+...++++..-..
T Consensus 243 ~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~--~llG~G~G~~F~laL~l 320 (395)
T COG2807 243 AEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWA--LLLGLGQGGAFPLALTL 320 (395)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHH--HHHhCccchHHHHHHHH
Confidence 1222344455678889999999999975 6666655543333332332222 222222222 22222234455555444
Q ss_pred cccccCc-chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhH-HHHHHHHHHHHHHHHHHhc
Q 015488 319 APEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLI 380 (406)
Q Consensus 319 ~~El~p~-~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 380 (406)
...-.+. +.-+.-.|+...+|++-+.++|.+++++.|..+++. +...+..+.+...+..+..
T Consensus 321 i~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 321 ILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 4444444 555677788899999999999999999999887653 3445555555555555544
No 103
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.40 E-value=1e-11 Score=113.21 Aligned_cols=111 Identities=20% Similarity=0.270 Sum_probs=98.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCc-chhHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN-RGKWMVVFSTFWTFGSVSEA 78 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~-Rg~~~~~~~~~~~~G~~l~~ 78 (406)
|+|.-++.+..++..++++-++..+|+++++.|.+||+|.+... +....+++.+|.+. ||+.+|..-.+..+|.+++|
T Consensus 134 Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgP 213 (464)
T KOG3764|consen 134 GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGP 213 (464)
T ss_pred ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecC
Confidence 57888999999999999999999999999999999999988763 55667888888865 79999999999999999999
Q ss_pred HhhHHhcccchhHHHHHHhhHHHHHHHHHHHhc
Q 015488 79 ALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM 111 (406)
Q Consensus 79 ~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~ 111 (406)
+.++++-+..|.+.+|++.++..++-..+.+++
T Consensus 214 pfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 214 PFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred CcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999998888899999999999888876666554
No 104
>PRK11462 putative transporter; Provisional
Probab=99.39 E-value=5.3e-10 Score=109.38 Aligned_cols=105 Identities=18% Similarity=0.093 Sum_probs=66.0
Q ss_pred cchhhHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhccCCcchh-hHHHHHhhcC-CCcchhHHHHHHHHHHHH
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHV-FFSWFMEFVP-PSNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G 73 (406)
||+-++++.+...++..+....|+ ...+.+.-++..++.....+ ..++..|.++ +++|.+..++-..+..+|
T Consensus 79 ~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG 158 (460)
T PRK11462 79 FRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAG 158 (460)
T ss_pred cchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 455666677777777766654543 23344444444444433322 2345679888 788999999999888888
Q ss_pred HHHHHHhhHHhcc-------cchhHHHHHHhhHHHHHHHH
Q 015488 74 SVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLI 106 (406)
Q Consensus 74 ~~l~~~l~~~~~~-------~~~Wr~~f~i~~ip~~~~~~ 106 (406)
.++++.+...+.. ..+|+....+.+++.++..+
T Consensus 159 ~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~ 198 (460)
T PRK11462 159 GMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA 198 (460)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 8777666543321 13688887777776655543
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.37 E-value=3.3e-10 Score=109.99 Aligned_cols=286 Identities=20% Similarity=0.205 Sum_probs=163.3
Q ss_pred cchhhHHHHHHHHHHHHHHhhc-c-------cHHHHHHHHHHhhccCCcchh-hHHHHHhhcC-CCcchhHHHHHHHHHH
Q 015488 2 EEGSILGGALVTFVAGLLSAFS-P-------NYISLLILRGLAGAGLGSGHV-FFSWFMEFVP-PSNRGKWMVVFSTFWT 71 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a-~-------~~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p-~~~Rg~~~~~~~~~~~ 71 (406)
||+-++++.....++..+.... | ....+.+.-++..++.....+ ..++..|.++ +++|.+..+.-..+..
T Consensus 71 rrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 71 RRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSM 150 (428)
T ss_pred cceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHH
Confidence 5666667888888888877766 4 122345556555665554433 3456789988 4789999999888888
Q ss_pred HHHHHHHHhhHHhc----c--c-chhHHHHHHhhHHHHHHH-HHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCC
Q 015488 72 FGSVSEAALAWIVM----P--I-LTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 143 (406)
Q Consensus 72 ~G~~l~~~l~~~~~----~--~-~~Wr~~f~i~~ip~~~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 143 (406)
+|.++.+.+...+. + . .+|++...+.++..++.. +..+..+|.++ +.+
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~------------------ 206 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV------EVT------------------ 206 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc------------------
Confidence 88876665554432 1 1 279999998888776654 34455666110 000
Q ss_pred CCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Q 015488 144 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLW-VLYFGNSFVYYGIVLLASELS 222 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 222 (406)
++ .++.+ -.+.++..++++.+....... +.++...+..-...++.....
T Consensus 207 ------------~~----~~~~~--------------~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl 256 (428)
T PF13347_consen 207 ------------EQ----EKKIS--------------LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL 256 (428)
T ss_pred ------------cc----ccccc--------------cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh
Confidence 00 00000 001222333333333222222 222222211111111222111
Q ss_pred ccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHH
Q 015488 223 GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNILLTAL 300 (406)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 300 (406)
. ..+. ......+..+..+++..+.++++||+|+|+.+..+..+.++....+.... +.+.....
T Consensus 257 ~--------------~~~~-~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (428)
T PF13347_consen 257 G--------------NEGL-ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLIL 321 (428)
T ss_pred c--------------Cchh-hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1 0111 11122344566788889999999999999999888777776555444332 33333333
Q ss_pred HHHHHHHhhhhhhhhhhhcccccCc-------chhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 301 LSGARMFSMGTFIIANIFAPEIYPT-------SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~El~p~-------~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
...........+...+.+.+|+.+. +..+.-.|+.+...+++..+++.+.+.+++.
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3333344445567778888888873 3347778888888899988888877766543
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.36 E-value=6.1e-10 Score=109.48 Aligned_cols=108 Identities=15% Similarity=0.083 Sum_probs=66.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----hhh-hHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----LQS-NILLTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
...+..+++.++.+++.||+|+|+.+..+..+..+....+.. ..+ ............+.....+...+.+.+|..
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 334667888889999999999999987766544433222211 111 121111111222222334456677888884
Q ss_pred C-----cchh--hHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 324 P-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 324 p-----~~~R--~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
+ +..| +...|....+.+++..+++.+.+.+++.
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5554 5566788888899999999888877653
No 107
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=5.3e-12 Score=124.64 Aligned_cols=134 Identities=16% Similarity=0.011 Sum_probs=97.4
Q ss_pred CcchhhHHHHHHHHHHHHH---HhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHH-HHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLL---SAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~---~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~ 75 (406)
+||+.++.+.++..++... ...+++...++++|++.|++.+... ....+..|.+|++.||...++ ++.+...| .
T Consensus 314 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~ 392 (490)
T PRK10642 314 GRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-G 392 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-H
Confidence 6888887776554433322 2335567888999999998765542 344567899999999998886 56655444 5
Q ss_pred HHHHhhHHhcc-cchhHHHHHHhhHHHHHHHHHHHhccCCcchhhcc-----CChhhHHHHHHHHH
Q 015488 76 SEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK-----GRITDAHNILDKIA 135 (406)
Q Consensus 76 l~~~l~~~~~~-~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~-----~~~~~a~~~l~~~~ 135 (406)
++|.+...+.+ ..+|+.++++..++.++..+..+++||||+|+.++ ||.|||++.++|++
T Consensus 393 ~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 393 LTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 56665554443 34688888877778777777777889999999865 99999999999886
No 108
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=1.9e-09 Score=99.72 Aligned_cols=322 Identities=17% Similarity=0.172 Sum_probs=183.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc--H-HHHHHHHHHhhccCCcchhh-HHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN--Y-ISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~--~-~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
.||+.+-....+.+++.++..++++ + ....+.-.+..++.....+. .+++..+.++++-|+..+.-...-.+|.++
T Consensus 87 ~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i 166 (438)
T COG2270 87 PRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVI 166 (438)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchH
Confidence 3788888888888888888877766 3 33444555666776655454 456778899988888765533333344433
Q ss_pred HHHhhH--Hh-c---------------ccchhHHHHHHhhHHHHHH-HHHHHhccCCcchhhccCCh-hhHHHHHHHHHH
Q 015488 77 EAALAW--IV-M---------------PILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRI-TDAHNILDKIAQ 136 (406)
Q Consensus 77 ~~~l~~--~~-~---------------~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~~l~~~~~~-~~a~~~l~~~~~ 136 (406)
.-.... ++ . +...=|..+.+.++.-++. +..++..||-++ .+... +-.++..+++.+
T Consensus 167 ~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~---~~~~~~~~l~~g~k~L~~ 243 (438)
T COG2270 167 LLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEK---ISSPPPTALRNGFKELKS 243 (438)
T ss_pred HHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccc---ccccchHHHHHHHHHHHH
Confidence 222211 11 1 2234688888887765554 455556655543 00000 000011111110
Q ss_pred HcCCCCCCCCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHH--HHHHHHHHH
Q 015488 137 FNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYF--GNSFVYYGI 214 (406)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 214 (406)
++++.+..+.....++.++.+. .+.+.-.+.
T Consensus 244 -----------------------------------------------t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~ 276 (438)
T COG2270 244 -----------------------------------------------TFKEIRGRKNLVLFLIARFFYIDGVNTILAMGG 276 (438)
T ss_pred -----------------------------------------------HHHHHhcccchHHHHHHHHHHHhhHHHHHHHHH
Confidence 1111111111122222222221 122222222
Q ss_pred HHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh
Q 015488 215 VLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN 294 (406)
Q Consensus 215 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~ 294 (406)
.+-...+ +..+.+.....+..++++++|+++.|++.||+|.|+++.++.++..+..+........
T Consensus 277 ~fg~~~~---------------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~ 341 (438)
T COG2270 277 VFGAADL---------------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGE 341 (438)
T ss_pred HHHHHHc---------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcccc
Confidence 2211111 1233456667777889999999999999999999998888766655544433332322
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhh-HHHHHHHHHHHHH
Q 015488 295 ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLS 373 (406)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~ 373 (406)
.....+.+....+..+..+..-.|.+++.|++.-+...|+-+..+|..++++|+....+.+.+++. ..+..+.++..++
T Consensus 342 ~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iG 421 (438)
T COG2270 342 LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIG 421 (438)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 222223223333445667788889999999999999999999999999999999988776666543 3445555555555
Q ss_pred HHHHHhcccccCCcc
Q 015488 374 VVVILLIPFETKGKE 388 (406)
Q Consensus 374 ~~~~~~~~~et~~~~ 388 (406)
.+. +...|+.+.++
T Consensus 422 l~~-L~~v~~~~~~~ 435 (438)
T COG2270 422 LLL-LLRVKVPGRRE 435 (438)
T ss_pred Hhh-EEeecCCCCcc
Confidence 544 34444444433
No 109
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=1.6e-09 Score=106.60 Aligned_cols=181 Identities=12% Similarity=0.179 Sum_probs=106.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchH
Q 015488 192 RFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK 271 (406)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR 271 (406)
+.++.....|..++......++.....|.+..+.+ ..............++..++.++.|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----------ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLN-----------LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 34455555566555555555555444444432211 1111112223334456778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHH
Q 015488 272 LSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 351 (406)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~ 351 (406)
+.+..+.+..++..+......+........+...+.. +.......+.+|.+|++.|+.+.|+.+..+.+|+.+++.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~-~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSL-ATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888876666655444333332222211111111211 222233446789999999999999999888888877776665
Q ss_pred HHhh----h-----chhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 352 GLVT----S-----CHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 352 ~l~~----~-----~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.+.. . .+....|.+.++++++.++..++++++.
T Consensus 181 ~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 181 LVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 4322 1 2344667778887777777766665443
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1e-08 Score=97.72 Aligned_cols=289 Identities=17% Similarity=0.142 Sum_probs=162.3
Q ss_pred cchhhHHHHHHHHHHHHHHhhccc------HHHHHHHHHHhhccCCcchhh-HHHHHhhcC-CCcchhHHHHHHHHHHHH
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHVF-FSWFMEFVP-PSNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~------~~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p-~~~Rg~~~~~~~~~~~~G 73 (406)
||+-++++.+...+...++-.+++ ....++.-.+.|++.....+. .++..|..+ ++||.+..++-+.+..+|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 677788888999999988888874 334555555666655443222 234567755 478999999999999999
Q ss_pred HHHHHHhhHHh----cc---cchhHHHHHHhhHHHHHHHHHH-HhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCCC
Q 015488 74 SVSEAALAWIV----MP---ILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSG 145 (406)
Q Consensus 74 ~~l~~~l~~~~----~~---~~~Wr~~f~i~~ip~~~~~~~~-~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~ 145 (406)
.++...+...+ .+ ..|||..-++.++.+.+..+.. +...|-+. ++.
T Consensus 162 ~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~---------~~~----------------- 215 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV---------ETQ----------------- 215 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC---------ccc-----------------
Confidence 87766655443 22 4589998888877776664443 33333221 000
Q ss_pred CCcCCCCCCcccccccCCccccchhhhcccccccccc-chhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015488 146 NLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGF-SSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGS 224 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (406)
. . ++ ++ +.+. .++..+++++.++..+...+..+......-+...+....
T Consensus 216 -~--------~---~~-~~--------------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y--- 265 (467)
T COG2211 216 -P--------T---KT-GV--------------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY--- 265 (467)
T ss_pred -c--------C---cc-cc--------------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE---
Confidence 0 0 00 00 0000 122334444444333332222221111111111111000
Q ss_pred CCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHH
Q 015488 225 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILLTALLS 302 (406)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 302 (406)
..+..+...+..........+.+.++...+.+|+|+|+++.++.++..+....+++...+ ....+...
T Consensus 266 ----------~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~ 335 (467)
T COG2211 266 ----------VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALI 335 (467)
T ss_pred ----------EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHH
Confidence 011222333444455556666778999999999999999999877766655544443322 22222222
Q ss_pred HHHHHhhhhhhhhhhhccccc-----Ccchh--hHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 303 GARMFSMGTFIIANIFAPEIY-----PTSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~El~-----p~~~R--~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
..........+..|...+|.. -|..| +...|...++.++|..++.++.+.++..
T Consensus 336 i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 336 IAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334455677888888664 34445 5566777888889988888877766543
No 111
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.24 E-value=3.1e-10 Score=91.49 Aligned_cols=133 Identities=18% Similarity=0.186 Sum_probs=93.7
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHH
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 331 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a 331 (406)
++.+++....+++.||+|||+.+..+.....+.........+............+......+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 44566778899999999999998877666555544433322222222222222222333456677888999999999999
Q ss_pred HhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 332 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 332 ~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.++.+....++..++|.+.+.+.+..+....+.+.+..++++.+..+++.||+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999988777655554567777777777777777777664
No 112
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.24 E-value=3.3e-08 Score=94.43 Aligned_cols=110 Identities=17% Similarity=0.198 Sum_probs=74.1
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHH----HHHHhhhhhhhhhhhccccc
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLTALLSG----ARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~El~ 323 (406)
+..+.+++-....+++..|+|-|++++.+.+...+=...+... .+.......... -.......+.....+..|..
T Consensus 251 l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~ 330 (400)
T PF03825_consen 251 LGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA 330 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC
Confidence 4456788898999999999999999888766655423222222 222222221111 11111223455667889999
Q ss_pred CcchhhHHHhHHHHhH-hHHHHHHHHHHHHHhhhch
Q 015488 324 PTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~-~~g~~~~p~~~~~l~~~~~ 358 (406)
|++.|++++|+.++.. .+|+.++.++.+++.+..+
T Consensus 331 p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 331 PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 9999999999998875 4788899999998887654
No 113
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=1.9e-09 Score=104.12 Aligned_cols=138 Identities=9% Similarity=-0.026 Sum_probs=94.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...++..++.+..|++.||+|||+.+..+.++.++.........+.......-+...+...+..+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 130 (412)
T TIGR02332 51 LFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFR 130 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHH
Confidence 33456678888999999999999999887776666555443333322222211222222233345556778999999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhh------chhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTS------CHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
+++.|+.+....+|..++|.+.+++.+. .+....|.+.++..++.+++..++.||++.
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 131 ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 9999999999899999999888766532 345566777777776666666666677653
No 114
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.19 E-value=1.9e-09 Score=103.87 Aligned_cols=140 Identities=17% Similarity=0.134 Sum_probs=92.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
......++..++.++.|+++||+|||+.+..+.++..+..+......+............+......+....+.+|.+|+
T Consensus 55 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 134 (406)
T PRK11551 55 AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGP 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH
Confidence 33444567788999999999999999999887766555444333322222222222222222233345667788999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.|+++.++.+....+|+.++|.+...+.+..+....+.+.+++.++..+...++.||++
T Consensus 135 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 135 RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999887665555444445566666655555555555556654
No 115
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=1.7e-09 Score=103.23 Aligned_cols=143 Identities=19% Similarity=0.138 Sum_probs=99.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 324 (406)
.......++..++.++.|.+.||+|||+.+..+..+..+.........+............+......+....+..|.+|
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 123 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYP 123 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcC
Confidence 33444456678889999999999999999988766665554443333322222222222222223334566778899999
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCc
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 387 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 387 (406)
++.|+++.|+.+....+|..++|.+.+.+.+..+....+.+.++.+++..+...+..||++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 124 GEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999888776655555667777777777766666666776544
No 116
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.18 E-value=1.7e-09 Score=103.76 Aligned_cols=141 Identities=15% Similarity=0.080 Sum_probs=95.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....+...++.++.|+++||+|||+.+..+.+...+.........+......................+.+..|.+|.+
T Consensus 44 ~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~ 123 (392)
T PRK10473 44 FSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR 123 (392)
T ss_pred HHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH
Confidence 33344566778899999999999999998877666555444333222222111111122222223455677889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCc
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 387 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 387 (406)
.|+++.++.+....++..++|.+.+.+.+..+....+.+.++++++..++.++..||++.+
T Consensus 124 ~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 124 RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999989998877665555555667777777777766666666776544
No 117
>TIGR00895 2A0115 benzoate transport.
Probab=99.18 E-value=1e-09 Score=104.98 Aligned_cols=138 Identities=20% Similarity=0.143 Sum_probs=94.6
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
....++..++.++.++++||+|||+.+..+.++..+.........+............+......+....+.+|.+|.+.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34446678899999999999999999988776666554443333322222222222222223345667888999999999
Q ss_pred hhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 328 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 328 R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
|+++.|+......+|+.++|.+.+.+.+..+....+.+.+..+++..++...+.||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999998887776655555566665555555555555556653
No 118
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.18 E-value=4.2e-09 Score=107.40 Aligned_cols=108 Identities=17% Similarity=0.116 Sum_probs=77.3
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++.++|.+++|+++||+|||+.++++.++.++..+......+.....+.-+...++..+..+..+.+.+|.+|.+
T Consensus 208 ~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~ 287 (742)
T TIGR01299 208 GLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE 287 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 34445778899999999999999999998877666655444333332222222222333334455678899999999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHh
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~ 354 (406)
.|+...++...+..+|+++++.+...+.
T Consensus 288 ~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 288 KRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998898888887655443
No 119
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.17 E-value=2.2e-09 Score=104.51 Aligned_cols=168 Identities=16% Similarity=0.199 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHH
Q 015488 199 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIM 277 (406)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~ 277 (406)
.++...+...+.+|++..+.+....+. .+..................++.+++|+++||+ |||+.+..+
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~----------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQ----------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 334444556677887766655443211 011111222223333455677889999999999 999998887
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhhh-hhhhhhhcccccCcc--hhhHHHhHHHHhHhHHHHHHHHHHHHH
Q 015488 278 FIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGT-FIIANIFAPEIYPTS--MRSTGAGVAYAVGRIGGMVCPLVAVGL 353 (406)
Q Consensus 278 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~p~~--~R~~a~g~~~~~~~~g~~~~p~~~~~l 353 (406)
.++..+....+.... ........ ........+. .+....+.+|+||++ .|.++.++.++.+++|++++|.+.+++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~-l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLS-LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHH-HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 766555433322211 11111111 1111112222 244567889999986 799999999999999999999999988
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHH
Q 015488 354 VTSCHQTAAILLLEALIVLSVVVI 377 (406)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~~~~~ 377 (406)
.+..+.+..|.+.++..+++.+..
T Consensus 162 ~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 162 QEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HhhhChHHHHHHHHHHHHHHHHHH
Confidence 776666666666555555544443
No 120
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.15 E-value=3.8e-09 Score=102.77 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=94.3
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++..++.+..|++.||+|||+.+..+.++.++.........+............+.....++....+.+|.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 143 (434)
T PRK11663 64 ATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT 143 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH
Confidence 34445677889999999999999999998887777766554433332222211111122222223455677889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.++.+++.++...++.+|+
T Consensus 144 ~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 144 ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998888777666655667776766655544444444443
No 121
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.15 E-value=7.1e-09 Score=99.51 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=93.7
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...+...++.+..+.+.||+|||+.+..+.++.++.........+.+.....-....+......+....+.+|.+|++.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 34566777889999999999999999888777766544433332222222221222222233445667788999999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.+.++......++..++|.+.+.+.+..+....|.+.+++++++.+......||++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999887776655556666666666665555444456654
No 122
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.15 E-value=5e-09 Score=98.49 Aligned_cols=140 Identities=19% Similarity=0.107 Sum_probs=96.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
......+...++.+..|.++||+|||+.+..+.++.++......+..+.+......+...+......+....+..|.+|.
T Consensus 37 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 116 (352)
T PF07690_consen 37 LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPP 116 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchh
Confidence 34445567788999999999999999988888777766633322222222222222222233334556778889999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.|+.+.|+.+....+|..++|.+.+.+.+..+....+.+.++.+++..++..++.++++
T Consensus 117 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 117 EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 999999999999999999999999887665555556788888888888775444444433
No 123
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.14 E-value=4.9e-09 Score=100.60 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 015488 193 FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL 272 (406)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~ 272 (406)
.++.....++.++...+..+......+.+..+.+ ..............+...++.++.|.++||+|||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~ 78 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFG-----------LTTVDAASLISAALISRWFGALMFGLWGDRYGRRL 78 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444445556565555555555554454432211 11112222333445677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHH
Q 015488 273 SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 352 (406)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~ 352 (406)
.+..+.++..+..+......+........+..........+....+..|.+|++.|+.+.|+......+|..++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 79 PMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887666655544433322222221111222222233445567788999999999999999999999999999988776
Q ss_pred Hhhhch--hhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 353 LVTSCH--QTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 353 l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.+..+ ....+.+.+...++. ++.....||++
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 655443 333444433333333 33334445653
No 124
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=1.5e-09 Score=103.51 Aligned_cols=141 Identities=14% Similarity=0.127 Sum_probs=98.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
......+...++.++.|.++||+|||+.+..+.++.++.........+............+......+....+.+|.+|+
T Consensus 34 ~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 113 (399)
T TIGR00893 34 VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPA 113 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH
Confidence 33445567788899999999999999998887766655544433333222222222222222333456677889999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
+.|+++.|+......+|..++|.+.+.+.+..+....+.+.++.+++..+...++.||++.
T Consensus 114 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 114 SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 9999999999999999999999988877666665666777777777776666666666543
No 125
>PRK10054 putative transporter; Provisional
Probab=99.13 E-value=4.5e-09 Score=100.89 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=89.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...+.++++.+..|.++||+|||+.+..+.+...+....+....+...................+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 130 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK 130 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH
Confidence 33456778889999999999999988877665555444333333222221111111111122244567778899999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+++.|+.+....+|..++|.+.+.+.+ .+....|.+.+++++++.+...++.||+
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998886654 4445567777777666655555544444
No 126
>PRK10504 putative transporter; Provisional
Probab=99.12 E-value=8.4e-09 Score=101.47 Aligned_cols=179 Identities=11% Similarity=0.021 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 015488 196 TTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT 275 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~ 275 (406)
..+.++..++...+..+....+.|.+..+.+ ..............++..++.++.|+++||+|||+.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 79 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLG-----------ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF 79 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 3444555555555555555545554432211 11111122223334566778899999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 276 IMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
.+..+.++.........+.......-....+......+....+..|.+|++.|+++.|+.+....+|..++|.+.+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 77665555443333322222222211222222223345667778899999999999999999999999999999887777
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 356 SCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
..+..+.|.+...+++++.+......|+.+
T Consensus 160 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 160 YASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 655556666666666666666665555544
No 127
>PRK03699 putative transporter; Provisional
Probab=99.12 E-value=1.4e-08 Score=97.59 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=85.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...++..++.+++|++.||+|||+.+..+.++..+.........+............++.....+....+.+|.+|++.|
T Consensus 50 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r 129 (394)
T PRK03699 50 FLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR 129 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH
Confidence 34567788999999999999999998887666555444333333222222221222222222334556778899999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHHHHHHHH
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~ 378 (406)
+.+.++.+....+++.++|.+.+.+... .+....+.+.++.+++..+...
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888889887766543 3445566666666655544433
No 128
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.12 E-value=7.3e-09 Score=100.45 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=81.2
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
....++..++.++.|+++||+|||+.+..+.+..++.........+.......-....+...+.++....+..|.+|++.
T Consensus 60 ~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~ 139 (426)
T PRK12307 60 TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL 139 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH
Confidence 34456778899999999999999999988877766655443333322222222122222223345667778899999999
Q ss_pred hhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHH
Q 015488 328 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 365 (406)
Q Consensus 328 R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~ 365 (406)
|+++.|+......+|.+++|.+.+.+.+..+....+.+
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 99999999988889999998887766655444444444
No 129
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.11 E-value=7.6e-09 Score=102.45 Aligned_cols=164 Identities=19% Similarity=0.197 Sum_probs=101.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 015488 191 PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR 270 (406)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 270 (406)
++.++....+++.++.+.+.........|.+..+. +..............++..++.+..|+++||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 84 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF-----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRYGR 84 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34445555556666665555555554445443211 1111122223334456778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHH
Q 015488 271 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 350 (406)
Q Consensus 271 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~ 350 (406)
|+.+..+.++.++.........+............+...+.++....+..|.+|.+.|+.+.++.+....+|+.++|.+.
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 85 RLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877666555444333332222222222222223334556677889999999999999999999999999999988
Q ss_pred HHHhhhchhhHHHHH
Q 015488 351 VGLVTSCHQTAAILL 365 (406)
Q Consensus 351 ~~l~~~~~~~~~~~~ 365 (406)
+.+.+..+....+.+
T Consensus 165 ~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 165 SLVVPVWGWRALFFI 179 (496)
T ss_pred HHHhccCCHHHHHHH
Confidence 877665544444443
No 130
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.11 E-value=2.7e-07 Score=90.05 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=77.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCC--cchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~-~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~l 76 (406)
|||+.++++.++..++..+.+... +...+.+.-.+.++|.|.. +...+++.|.+|++ +|....++.....++|..+
T Consensus 74 Grrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~i 153 (493)
T PRK15462 74 GNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSII 153 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHH
Confidence 689999999999988887666543 2233343333344444543 33456789999986 6888899999999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHHH
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVLL 105 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~ 105 (406)
+|.+...+.+..|||+.|.+.++..++..
T Consensus 154 ap~l~g~L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 154 APIACGYAQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHHHH
Confidence 99999998888899999998776444433
No 131
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.11 E-value=6.7e-09 Score=100.08 Aligned_cols=139 Identities=19% Similarity=0.078 Sum_probs=94.3
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
....++..++.++.|.++||+|||+.+..+.....+.........+...................+..+.+..|.+|++.
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 34446677888999999999999999888776666554444333322222111111111112223456677789999999
Q ss_pred hhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 328 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 328 R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
|..+.++......++..++|.+.+.+.+..+....+.+.+++++++.+..++..||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999888888888999887777665555566777777777777666666677654
No 132
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.09 E-value=1.6e-08 Score=95.42 Aligned_cols=135 Identities=14% Similarity=0.047 Sum_probs=90.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLTALLSGARMFSMGTFIIANIFAP 320 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
......+...++.+..|.++||+|||+.+..+..+..+......... +............+......+....+.+
T Consensus 39 ~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 118 (365)
T TIGR00900 39 AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP 118 (365)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778889999999999999999887666554433322211 2222222222222222333456678899
Q ss_pred cccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 321 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 321 El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
|.+|++.|+.+.|+.+....+|..++|.+.+.+.+..+....+.+.++..+++.+....+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 119 DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999988877665555555666566555555544444
No 133
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.08 E-value=5e-09 Score=103.34 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=97.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++..++.++.++++||+|||+.+..+.++..+.........+............+......+....+..|.+|++
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 122 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE 122 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH
Confidence 33445677888999999999999999998877766665544433333222222222222223334566778889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
.|+++.++......+|..++|.+.+.+.+..+..+.|.+.+..+++..++..++.||++.
T Consensus 123 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 123 KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999999998877766555566666666666666666666666543
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.08 E-value=1.7e-08 Score=96.73 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=91.9
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...+...++....|.+.||+|||+.+..+.....+.........+.......-..........++....+.+|.+|.+.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33455667778889999999999999888776665544443333222221111122122222335556778999999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+.+.|+......+|..++|.+.+.+.+..+....|.+.++++++..+......||.
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998887766655666677777777777666555555554
No 135
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.08 E-value=1.3e-09 Score=87.81 Aligned_cols=114 Identities=23% Similarity=0.336 Sum_probs=96.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 79 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 79 (406)
+||+.++.+.....++.+...++++++.+.+.+++.|++.+... ....+..|..|+++|++..+..+....+|..+++.
T Consensus 26 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 105 (141)
T TIGR00880 26 GRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPP 105 (141)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHH
Confidence 58899998988888888888888999999999999999887653 45567889999999999999999999999999999
Q ss_pred hhHHhcccchhHHHHHHhhHHHHHHH-HHHHhccCC
Q 015488 80 LAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPES 114 (406)
Q Consensus 80 l~~~~~~~~~Wr~~f~i~~ip~~~~~-~~~~~~pES 114 (406)
+...+.+..+||+.+.+.++..++.. ...+..||+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 106 LGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99988888899999998877766654 344455654
No 136
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.07 E-value=3.9e-07 Score=86.11 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=91.4
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhh
Q 015488 250 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 329 (406)
Q Consensus 250 ~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 329 (406)
..+.+.+...+..++.+|+|.|+.++++..+..+=........+.+.....=..-..-.-.......-|.++.+|++..+
T Consensus 268 ~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsA 347 (412)
T PF01306_consen 268 QVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSA 347 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHH
T ss_pred HHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHH
Confidence 34668888999999999999999988876555543333333333332221111111101112234566889999999999
Q ss_pred HHHhHHHHhH-hHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015488 330 TGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 391 (406)
Q Consensus 330 ~a~g~~~~~~-~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 391 (406)
+...+..++. .++.++.+.+.+.+.|..|....|.+++.+.+...++..+..++.|....++
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~~~~ 410 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQIVHP 410 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcccccC
Confidence 9999987664 5777777888898989887667788899888887777777765555544443
No 137
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.07 E-value=1.2e-08 Score=98.62 Aligned_cols=136 Identities=12% Similarity=0.049 Sum_probs=93.6
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.++..++.+..|.++||+|||+.+..+.++..+..+......+.....+.-+..........+..+.+..|.+|.+.|++
T Consensus 61 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 140 (413)
T PRK15403 61 LAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIK 140 (413)
T ss_pred HHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 46667888999999999999999988776666554444333332222111111111111223445677889999999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
+.++.+....++..++|.+.+.+.+..+....|++.++..+++.+...+..||++.
T Consensus 141 ~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 141 LMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999888766665555567777777777776665555678754
No 138
>PRK09848 glucuronide transporter; Provisional
Probab=99.06 E-value=2.5e-07 Score=90.41 Aligned_cols=105 Identities=10% Similarity=0.003 Sum_probs=65.8
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCc----
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPT---- 325 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~---- 325 (406)
+..+++..+.+++.||+|+|+.+..+.++..+....+.... .+ +..........+......+..+...+|..|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 45667888899999999999998887665554333332221 11 1111111112222233345566676777654
Q ss_pred ---chhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 326 ---SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 326 ---~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
+.++...|+.+...++|..+++.+.+.+++.
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568889999999999999988887766543
No 139
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.05 E-value=2e-09 Score=102.10 Aligned_cols=139 Identities=15% Similarity=0.119 Sum_probs=92.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++..++.++.|+++||+|||+.+..+.++..+..+......+.....+......+......+....+.+|.+|.+
T Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 115 (379)
T TIGR00881 36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115 (379)
T ss_pred HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh
Confidence 34445677788999999999999999998887766665544443333222222222222222334566778889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHH-HHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPL-VAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~-~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+.+.|+.+....+|+.++|. +...+.+..+....+.+.++++++..+...++.||++
T Consensus 116 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 116 ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9999999999999999999984 4444444444445666667666666555555555543
No 140
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.03 E-value=1.7e-08 Score=99.21 Aligned_cols=173 Identities=17% Similarity=0.098 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhh-hchHHHHHHH
Q 015488 199 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDR-VGRKLSMTIM 277 (406)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grR~~~~~~ 277 (406)
.++...+...+.+|+..-+.+.+..+... .+..............+...++.+.+|+++|| +|||+.+..+
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~--------lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAG--------LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 44555566777888776655544321100 01111122223334456678899999999999 8999999888
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc---hhhHHHhHHHHhHhHHHHHHHHHHHHHh
Q 015488 278 FIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~---~R~~a~g~~~~~~~~g~~~~p~~~~~l~ 354 (406)
.++.++....+....+...................+......+|.+|++ .|+++.++.+...++|+.++|.+.+++.
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 7766655444433222221111111111222223355567778999875 4899999999999999999999988877
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 355 TSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
+..+....|.+.++.++++.+...+
T Consensus 166 ~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 166 ENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHH
Confidence 7655555666656555555444333
No 141
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=9.7e-09 Score=97.84 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=96.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++..++.+..|.++||+|||+.+..+.+...+.........+............++.....+....+.+|.+|.+
T Consensus 32 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 111 (377)
T PRK11102 32 LSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE 111 (377)
T ss_pred HHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 33445667788999999999999999998877766665554433332222222222222222333455677889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+++.++.+....+|..++|.+.+.+.+..+....+.+.+.++++..+...+..||++
T Consensus 112 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 112 EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999999999999999998877766555556677777777777666666666654
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.02 E-value=4.4e-08 Score=96.95 Aligned_cols=136 Identities=17% Similarity=0.062 Sum_probs=90.8
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc-Ccchhh
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRS 329 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~-p~~~R~ 329 (406)
.++...+.+..|+++||+|||+.+..+.++..+..+......+.....+.-....+...+..+.......+.+ |++.|+
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4555667788999999999999998887776665544443333222222111122222222333444444554 789999
Q ss_pred HHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 330 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 330 ~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
++.|+......+|..++|.+.+.+.+..+..+.|.+...++++..++..++.||.++
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998888776666667777676777776666666666543
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.01 E-value=2.8e-08 Score=97.20 Aligned_cols=138 Identities=14% Similarity=0.042 Sum_probs=84.7
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----SNILLTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
....+...++.++.|+++||+|||+.+..+.++.++......... +............++....++.......|.+
T Consensus 70 ~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~ 149 (452)
T PRK11273 70 SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW 149 (452)
T ss_pred HHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhC
Confidence 344566788999999999999999999888776665544433211 1111112112222222223344455678999
Q ss_pred CcchhhHHHhHHHHhHhHHHH-HHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 324 PTSMRSTGAGVAYAVGRIGGM-VCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
|++.|+++.|+.+....+|+. .+|.+...+....+....+++.++.+++..++..++.||+.
T Consensus 150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 999999999998888888764 45544322222224445677777766666556556555653
No 144
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.99 E-value=4.3e-08 Score=92.88 Aligned_cols=108 Identities=21% Similarity=0.254 Sum_probs=72.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
.....++..++.++.|.++||+|||+.+..+.++..+......... +.............. .+.+.....+.+|.+|+
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 121 (366)
T TIGR00886 43 VAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPK 121 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCH
Confidence 3444567788999999999999999999887776666544433323 222221111111111 23344456778899999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
+.|+.+.++......+|..+++.+.+.+..
T Consensus 122 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 122 KIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999998888887777777655443
No 145
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.98 E-value=2.9e-08 Score=94.91 Aligned_cols=139 Identities=11% Similarity=0.038 Sum_probs=93.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....++..++.++.|++.||+|||+.+..+..+.++.........+.+.....-....+......+....+..|.+|++
T Consensus 44 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 123 (382)
T PRK10091 44 ISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG 123 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH
Confidence 34445778889999999999999999998887777665554443333222222212222222222344556778999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+.+.++......++..++|.+.+.+.+..+....|.+.+..+++..+...+..||.+
T Consensus 124 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 124 KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999888888888888888776666555556677777766666655555566754
No 146
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.98 E-value=2.2e-08 Score=97.51 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=89.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh---hhH-HHHHHHHHHHHHhhhhhhhhhhhccc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNI-LLTALLSGARMFSMGTFIIANIFAPE 321 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E 321 (406)
......++..++.+..|+++||+|||+.+..+.++.++......... +.. ..........++....++.......|
T Consensus 66 ~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~ 145 (438)
T TIGR00712 66 ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVH 145 (438)
T ss_pred HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 33444567788999999999999999988877666655544332211 111 11111111122222233445566789
Q ss_pred ccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 322 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 322 l~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.+|++.|+++.|+.+....+++.++|.+.+.+.+. .+....|.+.++++++..+...++.||++
T Consensus 146 ~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 146 WWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred hcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999999999889888887766544443 34445677777777776666666656643
No 147
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.98 E-value=6.3e-08 Score=92.90 Aligned_cols=140 Identities=16% Similarity=0.035 Sum_probs=89.0
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....+...++.++.|.++||+|||+.+..+.+...+.........+............+......+....+..|.+|.+
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 33445667788999999999999999988876665554443333222221111111111111122344556778999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
.|+.+.++.+....++..++|.+.+.+.+..+....+.+.++..++..+...++.||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999998888888888889888766665555556666666666555555555667543
No 148
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.96 E-value=1.3e-08 Score=94.29 Aligned_cols=143 Identities=17% Similarity=0.109 Sum_probs=111.4
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015488 242 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPE 321 (406)
Q Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 321 (406)
+.....-..++..-++-.+.|.++||.+.|..+..++++++++.+.+.+..+.....++......+....++...-..+.
T Consensus 65 ~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 65 QLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 33344444556778899999999999999999999999999998888776655555555555555555556777888889
Q ss_pred ccCcchhhHHHhHHHHhHhHHHHHHHHHH--HHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 322 IYPTSMRSTGAGVAYAVGRIGGMVCPLVA--VGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 322 l~p~~~R~~a~g~~~~~~~~g~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
-||++.|++..++=+...++|+.+.|.+. ..+....+....|++-++++++.+++.++..+||
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998888777 6555544555678888888888888888776443
No 149
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.96 E-value=4.6e-08 Score=92.86 Aligned_cols=136 Identities=13% Similarity=-0.009 Sum_probs=88.0
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
...++..++.+..|+++||+|||+.+..................+.......-+.... ..+.........+|.+|++.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAAL-GQPFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh-HhHHHHHHHHHHHHHcCHHHH
Confidence 3346677889999999999999987655433332222111111111111111111111 122233445555899999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+++.++......+|+.+++.+.+.+.+..+....|++.+++.++..+..+++.||.+
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999988887776666666777778887777777777777754
No 150
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.95 E-value=6e-08 Score=84.92 Aligned_cols=125 Identities=12% Similarity=0.046 Sum_probs=77.1
Q ss_pred hhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH-HHHh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 253 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLL-PLVT-LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 253 ~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.+.+.+.+.|.++||.||+..++.+..+..+..= .+.+ ..+++....+ .+... ...-...|-..+.+.|.+.-++
T Consensus 312 Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~--lGLsy-sllAcslWP~va~~vpE~qLGT 388 (459)
T KOG4686|consen 312 ISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTF--LGLSY-SLLACSLWPCVASLVPEEQLGT 388 (459)
T ss_pred hhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHH--HhhhH-HHHHHHHhhhhhhhCCHHHhcc
Confidence 3455667889999999999988776544333211 1111 1223322222 11111 1111335667778889999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhh----HHHHHHHHHHHHHHHHHHhc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQT----AAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~----~~~~~~~~~~~i~~~~~~~~ 380 (406)
|.|++.++-++|-.+.|.+.+.+.+..+++ ..|+.++..++++..+.+.+
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999888999988766643322 22445566666666555544
No 151
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.95 E-value=4.1e-08 Score=93.08 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=86.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 324 (406)
.......++..++.+..|.++||+|||+.+..+.++..+..+......+............+.....+........|.+|
T Consensus 42 ~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 121 (377)
T TIGR00890 42 IWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP 121 (377)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC
Confidence 33444556778899999999999999999988777666655444333322222111112112222223344455677777
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
+.|+.+.++......+|..+++.+...+.+..+....+.+.++.+++..+..+++.+|
T Consensus 122 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 122 -DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred -cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 4699999999888888877665555555554455566777777777776666655443
No 152
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.95 E-value=7.9e-08 Score=92.56 Aligned_cols=135 Identities=19% Similarity=0.125 Sum_probs=90.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
+..+...++..+.|.++||+|||+.+..+.+...+..+......+............+ ..+..+....+..|.+|++.|
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 140 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGL-LGGFVPNANALIATQVPRNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hhhhHHhHHHHHHHhcCHhhh
Confidence 3345667788899999999999999888766655544433332222211111111111 123344455667889999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+.+.|+.+....+|..++|.+.+.+.+..+....+.+.+++.+++.+...++.||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999998999999999888776655555667777777777766666655554
No 153
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.94 E-value=1e-07 Score=88.98 Aligned_cols=324 Identities=15% Similarity=0.166 Sum_probs=175.8
Q ss_pred chhhHHHHHHHHHHHHHHhhccc------HH--HHHHHHHHhhccCCcchhhHHHH-HhhcCCCcchhHHHHHHHHHHHH
Q 015488 3 EGSILGGALVTFVAGLLSAFSPN------YI--SLLILRGLAGAGLGSGHVFFSWF-MEFVPPSNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~~~a~~------~~--~l~~~R~l~G~g~g~~~~~~~~~-~E~~p~~~Rg~~~~~~~~~~~~G 73 (406)
|.+++++..+..+++.+-..+.. +. ..+.+..+.+.+.-..-...+-+ .-|+|+++|..+...-..+.++|
T Consensus 109 R~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LG 188 (480)
T KOG2563|consen 109 RTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLG 188 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHH
Confidence 55667777777777765554432 22 34455544444322111222223 35789999999998888888888
Q ss_pred HHHHHHhhHHhcc------cchhHHH--HHHh-hHHHHHHHHHHHhccCCcchhhccCChhhHHHHHHHHHHHcCCCCCC
Q 015488 74 SVSEAALAWIVMP------ILTWRWL--LALS-AIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 144 (406)
Q Consensus 74 ~~l~~~l~~~~~~------~~~Wr~~--f~i~-~ip~~~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 144 (406)
..++.++.-.+.+ ...|-.. |+.. .+-.+++.+..+..+|.|+.--+
T Consensus 189 vavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps------------------------ 244 (480)
T KOG2563|consen 189 VAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS------------------------ 244 (480)
T ss_pred HHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc------------------------
Confidence 8888877766543 3357663 4422 22222233333344444431100
Q ss_pred CCCcCCCCCCcccccccCCccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhc
Q 015488 145 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLAS-ELSG 223 (406)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 223 (406)
. .+. .+++. +-.++.+.+++. ++.+++.+.+..+...+|+++.... .+..
T Consensus 245 -----~-----s~~--~~~~~--------------~f~~si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~l~~ 295 (480)
T KOG2563|consen 245 -----A-----SQA--ALQDA--------------SFPKSIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLALCP 295 (480)
T ss_pred -----h-----hHh--hhhcC--------------cHHHHHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhcccc
Confidence 0 000 00000 011123333332 1344555566666666676655433 2211
Q ss_pred cCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHh----hhhhHHHH
Q 015488 224 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLLPLVT----LQSNILLT 298 (406)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 298 (406)
.+...........+..+++++|+++.|.+.||.+. |....+......+..+.+.. ....+...
T Consensus 296 ------------sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~ 363 (480)
T KOG2563|consen 296 ------------SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVF 363 (480)
T ss_pred ------------ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehh
Confidence 01111112233455567889999999999999844 44444443433333221111 11122222
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch----hhHHHHHHHHHHHHHH
Q 015488 299 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH----QTAAILLLEALIVLSV 374 (406)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~----~~~~~~~~~~~~~i~~ 374 (406)
..+....++..+..++..-...|.-=+..=++..|+.+..+.+-+++-.++.+.+.+..+ .+..-+.+...++...
T Consensus 364 ~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~ 443 (480)
T KOG2563|consen 364 TTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGA 443 (480)
T ss_pred hhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHH
Confidence 223333344556667777777887555566888999999999988887787776665544 3333456667777777
Q ss_pred HHHHhcccccCCccccc
Q 015488 375 VVILLIPFETKGKELVN 391 (406)
Q Consensus 375 ~~~~~~~~et~~~~~~~ 391 (406)
.+..+++|+-|.++.++
T Consensus 444 ~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 444 ILVAFFRPDYRRLRAEA 460 (480)
T ss_pred HHHhhhhhhHHhHhhhh
Confidence 78888888877666554
No 154
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.94 E-value=9.6e-08 Score=94.75 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=74.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHhhhhhhhhhhhc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS------NILLTALLSGARMFSMGTFIIANIFA 319 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (406)
......++.+++.++.+++.||+|||+.+..+.++..+..+......+ .....+.-+...+...+.++....+.
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 140 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIIT 140 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 344455778899999999999999999988776665554443332211 11111222222233344457788999
Q ss_pred ccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHH
Q 015488 320 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 353 (406)
Q Consensus 320 ~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l 353 (406)
+|.+|++.|+++.++.+....+|..+++.+...+
T Consensus 141 ~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 141 SEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888887765433
No 155
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.93 E-value=1.2e-07 Score=91.25 Aligned_cols=133 Identities=11% Similarity=-0.020 Sum_probs=89.0
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.+......+++|.++||+|||+.+..+.....+.........+.+..........+......+....+..|.+|++.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34455567889999999999999988877766655544433332222222122222222223445677889999999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+.|+.+....+|..++|.+.+.+. ..+....+.+.++.+++.+++..++.||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999988776 44555666666666666655544555553
No 156
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.92 E-value=3.2e-07 Score=88.55 Aligned_cols=141 Identities=11% Similarity=0.071 Sum_probs=88.2
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015488 243 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-----QSNILLTALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 243 ~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
......+..+.+.++.+..|++.||+|.|+.+..+..+.++..+..... .+.......-....+ ..+.++....
T Consensus 72 ~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gi-gg~~f~~~~~ 150 (462)
T PRK15034 72 LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGF-AGANFASSMG 150 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHH-HHHhHHHHHH
Confidence 3334444556667777888999999999999888777766555443332 111111111111111 2334556667
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh-----hhc-------------hhhHHHHHHHHHHHHHHHHHHh
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV-----TSC-------------HQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~-----~~~-------------~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
..++.||++.|+++.|+....+++|..+.+++.+.+. ... +.....++++...++.+++.++
T Consensus 151 ~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 151 NISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999998888888877766665433 111 1223445677777777666666
Q ss_pred ccccc
Q 015488 380 IPFET 384 (406)
Q Consensus 380 ~~~et 384 (406)
+.++.
T Consensus 231 ~~~~~ 235 (462)
T PRK15034 231 GMNDI 235 (462)
T ss_pred hCCCc
Confidence 65443
No 157
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.92 E-value=6.1e-08 Score=95.42 Aligned_cols=174 Identities=12% Similarity=0.072 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhh-hchHHHH
Q 015488 196 TTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDR-VGRKLSM 274 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grR~~~ 274 (406)
....++...+...+.||+..-+.+.+..+. .+.....................+++|+++|| +|||+.+
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~----------lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQ----------LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 334444555566778887765444332110 01111111111111222334445689999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc--hhhHHHhHHHHhHhHHHHHHHHHHH
Q 015488 275 TIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTS--MRSTGAGVAYAVGRIGGMVCPLVAV 351 (406)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~--~R~~a~g~~~~~~~~g~~~~p~~~~ 351 (406)
..+.++..+.........+ ...................+......+|.||++ .|..+.++.+...++|+.++|.+.+
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9987777665544443222 111111111122222223345567889999987 4588899999999999999999988
Q ss_pred HHhhhchhhHHHHHHHHHHHHHHHHHHhc
Q 015488 352 GLVTSCHQTAAILLLEALIVLSVVVILLI 380 (406)
Q Consensus 352 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 380 (406)
++.+..+.+..|.+.++ +++..++.+.+
T Consensus 165 ~l~~~~gw~~~F~i~~i-~~~~~~~~~~~ 192 (489)
T PRK10207 165 VIADKFGYSVTYNLCGA-GLIIALLVYFA 192 (489)
T ss_pred HHHHhhChHHHHHHHHH-HHHHHHHHHHH
Confidence 88776665555555433 33333333333
No 158
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.90 E-value=8.6e-08 Score=89.79 Aligned_cols=133 Identities=23% Similarity=0.195 Sum_probs=91.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....+...++.+..|.++||+|||+.+..+.+...+.........+...................+....+..|.+|++
T Consensus 40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 119 (352)
T cd06174 40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK 119 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc
Confidence 34445677889999999999999999888877776665554443332222222222222222333466778899999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
.|+++.++.+....+|+.++|.+.+.+.+..+....+.+.+...+++.+...+
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 120 ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF 172 (352)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887776555455566666666555554443
No 159
>PRK11043 putative transporter; Provisional
Probab=98.89 E-value=2e-07 Score=89.61 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=90.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
..+..+...++.++.|+++||+|||+.+..+..+..+.........+............+...........+..|.+|.+
T Consensus 47 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (401)
T PRK11043 47 LSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ 126 (401)
T ss_pred HHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH
Confidence 33445667889999999999999999998876665554443333222221111111111111122233455678999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|....+..+....+++.++|.+.+.+.+..+....+.+.+.+.++..+...+++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 127 KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999988888889999999888777666655667777777776666665565443
No 160
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.86 E-value=2.9e-07 Score=88.31 Aligned_cols=134 Identities=10% Similarity=-0.045 Sum_probs=87.0
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....+...+..+++|.++||+|||+++..+.++..+....+....+. . ..-...........+....+.+|++|.+
T Consensus 44 ~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~--~-~~r~l~G~~~a~~~pa~~a~i~~~~~~~ 120 (393)
T PRK11195 44 QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP--L-LAYGLVGIGAAAYSPAKYGILTELLPGE 120 (393)
T ss_pred HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 334446677888999999999999999988876665443332222221 1 1112222333344567788899999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+++.|+.......+..++|.+.+.+.+.. ...++.+.+.+.+++.+ ..+..||.+
T Consensus 121 ~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~-~~~~l~~~~ 177 (393)
T PRK11195 121 KLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAAL-FNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHhcCCCCc
Confidence 9999999999999899999999988776642 22333333333344433 334455644
No 161
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.84 E-value=1.7e-07 Score=90.74 Aligned_cols=138 Identities=15% Similarity=0.109 Sum_probs=87.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h-hhhh-HHHHHHHHHHHHHhhhhhhhhhhhcc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T-LQSN-ILLTALLSGARMFSMGTFIIANIFAP 320 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
......+...++.+..|.++||+|||+.+..+..+.++....+. . ..+. ...........++.....+....+.+
T Consensus 57 ~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 136 (417)
T PRK10489 57 SVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATP 136 (417)
T ss_pred HHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33444567788899999999999999988776555444332221 1 1111 11111111111211222344566788
Q ss_pred cccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 321 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 321 El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
|.+|++.|+++.++.+....+|..++|.+.+.+.+..+..+.+.+.+...+++.+....+ ||+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 199 (417)
T PRK10489 137 ALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PAL 199 (417)
T ss_pred hccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 999999999999999999999999999988877665555555666556656555554444 454
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.84 E-value=7e-08 Score=94.54 Aligned_cols=139 Identities=19% Similarity=0.079 Sum_probs=87.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--h-HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--N-ILLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
......++..++.++.|+++||+|||+.++.+.++..+..+....... . ......-....+......+....+.+|.
T Consensus 76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 155 (481)
T TIGR00879 76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEI 155 (481)
T ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHcc
Confidence 344455777889999999999999999998876665554443322111 1 1111111122222233445677888999
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHH---HHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVA---VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+|++.|+.+.++.+....+|..++|.+. ..+.+..+....+.+.+...++..+ ..++.||+.
T Consensus 156 ~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~ 220 (481)
T TIGR00879 156 APKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESP 220 (481)
T ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCh
Confidence 9999999999999999999999998876 3222333444555554444444443 344456653
No 163
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.83 E-value=1e-07 Score=93.61 Aligned_cols=136 Identities=10% Similarity=0.021 Sum_probs=94.9
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
...++..++.+.+|+++||+|||+.+..+.++.++......... +.......-+...+.....++....+.+|.+|++
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 33467788999999999999999999887776665544332211 1111111112222233344566778899999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|+++.|+......+|..++|.+.+.+.+.. +....|.+.++..++..++.+++++|.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999888777653 555677777777777766666665553
No 164
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.82 E-value=2.9e-07 Score=91.04 Aligned_cols=117 Identities=13% Similarity=0.031 Sum_probs=73.0
Q ss_pred HHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcch--hhHHHh
Q 015488 258 LLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSM--RSTGAG 333 (406)
Q Consensus 258 ~~~~~~l~dr-~grR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~--R~~a~g 333 (406)
..++|+++|| +|||+.+..+.++..+....+....+. ..................+....+.+|.||.+. |..+.+
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 4578999999 599999988776665544333332211 111111111112112223445677899998643 456788
Q ss_pred HHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHH
Q 015488 334 VAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 374 (406)
Q Consensus 334 ~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 374 (406)
+.+...++|+.++|.+.+++.+..+....|.+.++..+++.
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 88999999999999999988776665556665554444443
No 165
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.82 E-value=2.7e-07 Score=90.38 Aligned_cols=130 Identities=15% Similarity=0.021 Sum_probs=84.1
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALL-SGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
+...++..+.|+++||+|||+.++.+.++.++..+......+........ ....+.....+.....+..|.+| +.|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 44566778899999999999998887666555444333322211111111 11111111112344556678886 78999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 382 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 382 (406)
+.|+.+....+|+.++|.+.+.+.+..+....|.+.+++++++.+...++.+
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999888887777666667788888777766555555543
No 166
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.80 E-value=1.7e-07 Score=92.38 Aligned_cols=138 Identities=15% Similarity=0.052 Sum_probs=85.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--------hhhHHHHHHH----HHHHHHhhhhhhh
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--------QSNILLTALL----SGARMFSMGTFII 314 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~~~~~~~~~~~ 314 (406)
.....++..++.++.|+++||+|||+.+..+..+..+..+..... ..+......+ ....+...+..+.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 344457778899999999999999999988766655443322210 0111111111 1122223344566
Q ss_pred hhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh--------hhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 315 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 315 ~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
...+.+|.+|++.|+.+.|+......+|..+++.+...+. +..+....+++.++..++..+. .++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 7788999999999999999998888888888776544332 1223445566655665555444 44556764
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.79 E-value=7.6e-07 Score=86.58 Aligned_cols=134 Identities=20% Similarity=0.121 Sum_probs=79.7
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh----H----HHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN----I----LLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
.++..+|.+++|+++||+|||+.+..+.+..++.........+. . .....=+...+...+.++....+.+|.
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 152 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEV 152 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHh
Confidence 34556899999999999999999988877776655544322111 0 111111122222334456778899999
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh--------hhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+|++.|+.+.++.......|..+++.+...+. ...+....|.+-++..++.. +.....||++
T Consensus 153 ~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~ 222 (432)
T PRK10406 153 AVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETS 222 (432)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 99999999988876665566666655433221 12344455655444444432 2233345653
No 168
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.79 E-value=1.1e-07 Score=93.57 Aligned_cols=134 Identities=16% Similarity=0.043 Sum_probs=85.8
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-----LQSNILLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
....++..++.+.+|+++||+|||+.+..+.++.++....... ..+.......-....++....++....+.+|.
T Consensus 71 s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 150 (467)
T PRK09556 71 LGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRW 150 (467)
T ss_pred HHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3345667788999999999999999988877666654443322 11211121111122222233345667788999
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc---hhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC---HQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
+|++.|+++.|+....+.+|+.+++.+...+.... +....+.+.++..++.++..+++.
T Consensus 151 ~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~ 212 (467)
T PRK09556 151 TPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYG 212 (467)
T ss_pred cCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999988887765544432 122345555666655555555543
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=98.78 E-value=6.5e-07 Score=87.11 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=64.6
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 254 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL--------LTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 254 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
..+|.++.|++.||+|||+.++.+..+.++.........+... ..+.-+...+......+....+.+|.+|+
T Consensus 69 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 69 RPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 3468889999999999999998887766655444433222111 01111111111122244556789999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHH
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVG 352 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~ 352 (406)
+.|+.+.++.....++|..+++.+.+.
T Consensus 149 ~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 149 GRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988887777666665443
No 170
>TIGR00898 2A0119 cation transport protein.
Probab=98.77 E-value=1.3e-07 Score=93.93 Aligned_cols=134 Identities=16% Similarity=0.098 Sum_probs=90.1
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
..+..++.++|.++.|.++||+|||+.+..+.++..+..+......+.....+.-+...+...+..+....+..|.+|.+
T Consensus 133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 212 (505)
T TIGR00898 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK 212 (505)
T ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChh
Confidence 33445677889999999999999999998887776665554443333222222222233333444677888999999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|+.+.++......+|.+++|.+... ... ....+.+.++.+++..+.. ++.||+
T Consensus 213 ~r~~~~~~~~~~~~~g~~~~~~~~~~-~~~--wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 213 QRAIVGTLIQVFFSLGLVLLPLVAYF-IPD--WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-hhH--HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 99999999877777788888876543 322 3345666666666665555 445664
No 171
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.77 E-value=4.6e-07 Score=87.24 Aligned_cols=112 Identities=12% Similarity=0.024 Sum_probs=70.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhhHHH-HHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILL-TALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
.....++..++.++.|.+.||+|||+.+..+..+.++...... ....+... ....................+..|.
T Consensus 54 ~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~ 133 (402)
T TIGR00897 54 FTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYN 133 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHh
Confidence 3444567788999999999999999999887766655433221 11111111 1111111111111223344556788
Q ss_pred cCcchhhHHHhHHHHhHhHHH-HHHHHHHHHHhhhch
Q 015488 323 YPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCH 358 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~-~~~p~~~~~l~~~~~ 358 (406)
+|++.|+++.|+.++...+|. .++|.+.+.+.+..+
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 134 TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999988885 577877766665444
No 172
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.75 E-value=1.2e-06 Score=86.56 Aligned_cols=137 Identities=19% Similarity=0.109 Sum_probs=90.5
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh--hhhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL--QSNILLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
....+-.++-++.+|.+.||+.||++++.+-++..+....+. .. .+.+....+.+....+.....+....+.+|+
T Consensus 52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~l 131 (524)
T PF05977_consen 52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPEL 131 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333445566778899999999999999887665544322221 11 1222222222222222223346678889999
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|.+....|.++.....++...++|.+.+.++...+....|.+-+++.++..+....+.++.
T Consensus 132 V~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 132 VPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred ccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999999999988777766665666666666666555555554443
No 173
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.75 E-value=1e-06 Score=84.94 Aligned_cols=110 Identities=13% Similarity=0.012 Sum_probs=73.8
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSNILLTALLSGARMFSMGTFIIANIFAPE 321 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 321 (406)
.......++..++++..+++.||+|||+.+..+..+.++........ .+........+..........+....+..|
T Consensus 42 ~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~ 121 (410)
T TIGR00885 42 LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILV 121 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHH
Confidence 34445557788899999999999999999988877766544432211 111111111112222222233445667778
Q ss_pred ccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh
Q 015488 322 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 322 l~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~ 354 (406)
+.|.+.|++..++.+.+..+|+.++|.+.+.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 122 MGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999998877664
No 174
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.74 E-value=1.1e-06 Score=83.84 Aligned_cols=111 Identities=14% Similarity=-0.011 Sum_probs=73.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 324 (406)
.......++..++.++.|+++||+|||+.+..+.+...+.........+............+......+.......+..|
T Consensus 45 ~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 124 (381)
T PRK03633 45 VVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGT 124 (381)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444456778899999999999999999988777666554443333322222111112222222223333444567788
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
.+.|+.+.|..+....+|..++|.+.+.+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 125 SRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999988876544
No 175
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.73 E-value=2.4e-07 Score=92.42 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=95.5
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.++..+|+++.|.++||+|||+++..+.++..++.+......+-.....+=+...++..+.....+.+.+|.++++.|+.
T Consensus 128 ~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~ 207 (521)
T KOG0255|consen 128 FLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGL 207 (521)
T ss_pred HHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhH
Confidence 46678899999999999999999999988887776655554443334334344445566777888999999999999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+..+ ..+.+.++...|....++.. ++.+.+.+.....++..+. .+++||.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 208 ALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 9999 88888888888877776665 3334444445554544444 56666764
No 176
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.71 E-value=9.9e-07 Score=84.77 Aligned_cols=124 Identities=13% Similarity=-0.084 Sum_probs=75.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hhhh---HHHHHHH---HHHHHHhhhhhhhhhh
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSN---ILLTALL---SGARMFSMGTFIIANI 317 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~---~~~~~~~~~~~~~~~~ 317 (406)
......+...++....|.++||+|||+.+..+.++..+..+.... ..++ .....+. +..........+....
T Consensus 56 ~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 135 (399)
T PRK05122 56 VISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSIL 135 (399)
T ss_pred HHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHH
Confidence 334445667788899999999999999998877665543222211 1111 0011111 1111112222344456
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL 369 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~ 369 (406)
+..|.+|.+.|+++.++.......|..++|.+.+.+.+..+....+.+.+..
T Consensus 136 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 136 WGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred HHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 6789999999999999988877788888888877666654443333333333
No 177
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.71 E-value=2.2e-06 Score=80.22 Aligned_cols=137 Identities=15% Similarity=0.085 Sum_probs=99.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
..-...++..++..+-..+.||+.||++++..+.+..+.........+-.....-=....+.....+++...+.+++.|+
T Consensus 53 lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp 132 (394)
T COG2814 53 LITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPP 132 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 34444567778888999999999999999887666655444333322211111111112223345567888999999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccc
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 382 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 382 (406)
+.|++|.++....-.++..++.-+..++-+..|+..+|...+.+.+++.+......|
T Consensus 133 ~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 133 GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999988888888666666667677778899999999999888888877
No 178
>PRK09952 shikimate transporter; Provisional
Probab=98.70 E-value=1.8e-06 Score=84.13 Aligned_cols=133 Identities=16% Similarity=0.052 Sum_probs=80.3
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH----H----HHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----L----LTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
+...+|.++.|+++||+|||+.+..+..+.++.........+.. . ....=+...+...+.++....+..|.+
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 45668889999999999999999988777776655444322211 1 111111122223334456678889999
Q ss_pred CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh--------hchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 324 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT--------SCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
|.+.|+...+.......+|..+++.+...+.. ..+...+|++.++..++. ......+||++
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 99999998888877777777776655443321 223444555544443332 23333455654
No 179
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.68 E-value=1.1e-06 Score=84.36 Aligned_cols=127 Identities=12% Similarity=-0.014 Sum_probs=81.7
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
....++..++.+..+++.||+|||+++..+..+.++.........+.......-....+......+....+..|.+| +.
T Consensus 51 s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~ 129 (393)
T PRK09705 51 ALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR 129 (393)
T ss_pred HHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc
Confidence 33346677888999999999999999999888877766655543332222111112222222233444566788888 67
Q ss_pred hhHHHhHHHHhHhHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHHHHH
Q 015488 328 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVV 375 (406)
Q Consensus 328 R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~ 375 (406)
|+.+.|+.......|+.+++.+.+.+.+.. +....+.+++...++..+
T Consensus 130 ~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 130 TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999999888888888888877665543 333444455554444433
No 180
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.67 E-value=1.9e-06 Score=81.80 Aligned_cols=135 Identities=16% Similarity=0.048 Sum_probs=81.5
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhh
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 329 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 329 (406)
.+...+.....|.++||+|||+.++. +.....+.........+.......-...........+....+..|..|.+.|+
T Consensus 43 ~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~ 122 (375)
T TIGR00899 43 AIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGRE 122 (375)
T ss_pred HHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchh
Confidence 35566777888999999999887654 33333333332222222221111111111112223344556677888887777
Q ss_pred HH--HhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 330 TG--AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 330 ~a--~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.+ .+.......+|..++|.+.+.+.+..+....+.+.+.++++..+...++.||.+
T Consensus 123 ~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 123 AVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 55 577777778888899988877766556566777878777777776666556644
No 181
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.65 E-value=1.4e-05 Score=75.40 Aligned_cols=114 Identities=16% Similarity=0.215 Sum_probs=91.2
Q ss_pred chhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhH
Q 015488 3 EGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAW 82 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~ 82 (406)
|+.++...+...+...+.-+.++...+-+.-++-|++.+...+.++|+--..|+++=.++.+....+...|..+++.++.
T Consensus 71 kpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 71 KPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777777777788889999999999999999999888777777766668888788899999999999999999888
Q ss_pred Hhcc--cchhHHHHHHhhHHHHHHHHHHHhccCCcc
Q 015488 83 IVMP--ILTWRWLLALSAIPAFVLLIFIVFMPESPR 116 (406)
Q Consensus 83 ~~~~--~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~ 116 (406)
.+.. ..+.+.+..+......+.++..+++|-.++
T Consensus 151 llvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 151 LLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 7654 446777777777666666677777887655
No 182
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.64 E-value=1.2e-05 Score=78.03 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=71.9
Q ss_pred cchhhHH-HHHHHHHHHHHHhhc----ccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCC--CcchhHHHHHHHHHHHH
Q 015488 2 EEGSILG-GALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPP--SNRGKWMVVFSTFWTFG 73 (406)
Q Consensus 2 rr~~~~~-~~~~~~i~~~~~~~a----~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~--~~Rg~~~~~~~~~~~~G 73 (406)
|||.+++ +.++..++....+.. .+.....+.=++..+|....- +.-..+.|...+ +.||...+.......+|
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G 136 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVG 136 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 6666665 444443434433332 345555555556556554432 333456677633 33788888888889999
Q ss_pred HHHHHHhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccC
Q 015488 74 SVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPE 113 (406)
Q Consensus 74 ~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pE 113 (406)
.+++..+++.+.+..++|+.|.+.++..++. +...+..+|
T Consensus 137 ~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 137 SLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999988888889999998887654444 444555555
No 183
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.63 E-value=2.8e-06 Score=92.92 Aligned_cols=108 Identities=18% Similarity=0.010 Sum_probs=73.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
+..+..+++.+++|.++||+|||++++.+.++..+..+.... ..+.....+..+...+......+....+.+|.+|.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 334566788899999999999999998776554433222211 11212222222222222233345667889999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhh
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 356 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~ 356 (406)
+.|+.+.|+......+|..++|.+.+.+...
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988776654
No 184
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.62 E-value=3.4e-06 Score=78.44 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=96.3
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHH--Hhhhhhhhhhh
Q 015488 241 ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARM--FSMGTFIIANI 317 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 317 (406)
.+......+..+.+.+.-+.-+++.||+|.|+....+.++..+-.+...+ .+.... ..++....+ ...+.+++.-.
T Consensus 49 ~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~-~~ll~~gll~G~~GasFav~m~ 127 (417)
T COG2223 49 GQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST-WQLLVIGLLLGLAGASFAVGMP 127 (417)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch-HHHHHHHHHHhcccceehcccc
Confidence 45566777777888888899999999999999888877665543333222 111111 111111111 12334566677
Q ss_pred hcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch---hhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 318 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH---QTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 318 ~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
..++-||++.+++|.|+.. .|++|..+..++.|.+....+ .+....++....++..+...+...|
T Consensus 128 ~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 128 NASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred cccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899999999999999999 999999999988887776655 4455567777777766666666533
No 185
>PRK10133 L-fucose transporter; Provisional
Probab=98.62 E-value=6.2e-06 Score=80.29 Aligned_cols=147 Identities=13% Similarity=0.040 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhhHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHH
Q 015488 196 TTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT 275 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~ 275 (406)
....+...++...+.........|.+.... +..............++..++.+..|.++||+|||+.+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~-----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~ 95 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAF-----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGII 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 344444455555555555555556553221 112223334445556778889999999999999999998
Q ss_pred HHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHH
Q 015488 276 IMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 352 (406)
Q Consensus 276 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~ 352 (406)
.+..+..+...... ...+........+...+...........+..|..|.+.|....++.+.+..+|..++|.+...
T Consensus 96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777665544321 111111111111222222223344455666787777777778889888888899888887654
Q ss_pred H
Q 015488 353 L 353 (406)
Q Consensus 353 l 353 (406)
+
T Consensus 176 l 176 (438)
T PRK10133 176 L 176 (438)
T ss_pred H
Confidence 4
No 186
>PRK12382 putative transporter; Provisional
Probab=98.62 E-value=2.5e-06 Score=81.83 Aligned_cols=112 Identities=13% Similarity=-0.123 Sum_probs=69.6
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh-----hhhHHHHHHHHHHHHHhhhhhhhhhhh
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-----QSNILLTALLSGARMFSMGTFIIANIF 318 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
.....+...++.+..|.++||+|||+.++.+.+.+.+..+... .. .+.....+.-...........+....+
T Consensus 57 ~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 136 (392)
T PRK12382 57 VGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTW 136 (392)
T ss_pred HHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344466778889999999999999999887665544322111 10 111111111111111111222344556
Q ss_pred cccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch
Q 015488 319 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 358 (406)
Q Consensus 319 ~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~ 358 (406)
..|.+|++.|+++.|+.......+..++|.+.+.+.+..+
T Consensus 137 ~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 137 GLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7899999999999999888777888888888776655444
No 187
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.60 E-value=4.3e-06 Score=91.41 Aligned_cols=135 Identities=15% Similarity=-0.106 Sum_probs=82.1
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHH--HHHHHHhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 250 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCI--FLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 250 ~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
..+..++.+.++|.++||+|||+++........+ ........ .+.+......+..........+....+.+|++|.+
T Consensus 61 ~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~ 140 (1140)
T PRK06814 61 FILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD 140 (1140)
T ss_pred HHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc
Confidence 3355677888999999999999976432221111 11111111 22222222222333333344567788999999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+.+.|+..+...+|..++|.+.+.+....+....+ +.++...+.+++..+..|+++
T Consensus 141 ~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 141 ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999998877755444344 333333333333334444543
No 188
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.59 E-value=2.9e-07 Score=84.07 Aligned_cols=103 Identities=16% Similarity=0.123 Sum_probs=75.1
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHH
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 331 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a 331 (406)
+...+.+...|.++||.|||+++..|.+...+.........+ ..+.+..=.......+-.++.-++.+|+++.+.|+.+
T Consensus 79 ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~-F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ 157 (451)
T KOG2615|consen 79 ILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN-FAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLG 157 (451)
T ss_pred HHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccce
Confidence 567788889999999999999999988777775444333222 1121111111122344556778899999999999999
Q ss_pred HhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 332 AGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 332 ~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
.+.......+|-+++|.+.+++-.
T Consensus 158 ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 158 MSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred eeeeehhhhcchhhcchhhhHHHh
Confidence 999999999999999999887654
No 189
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.58 E-value=6.2e-06 Score=79.86 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=76.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHH--HHH-HHHHHHHhhhhhhhhhhhcc
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILL--TAL-LSGARMFSMGTFIIANIFAP 320 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~ 320 (406)
.......+...++..+.|+++||+|||+.+..+.....+....... ....... ... .....+.....+........
T Consensus 50 ~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (420)
T PRK09528 50 IIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIE 129 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhh
Confidence 3444555778889999999999999999887654443332221111 1111000 000 11111111111111111111
Q ss_pred cccC--cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 321 EIYP--TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 321 El~p--~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
+..+ .+.|+...|.....+.+|..++|.+.+.+.+. +....|++.++.++++.+..++..+|.
T Consensus 130 ~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 130 AYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred hHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccc
Confidence 2212 23456677888888899999999998877653 445567777777777666666655443
No 190
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.58 E-value=2.3e-06 Score=84.65 Aligned_cols=126 Identities=15% Similarity=0.110 Sum_probs=73.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 324 (406)
......+...++..+.|.++|.+|||..++.+.++..+-.+.....++- .......+.. + ..+.........+|+.|
T Consensus 83 ~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G-v-gaG~~~~~~~~isEl~p 160 (599)
T PF06609_consen 83 FSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG-V-GAGVQELAALAISELVP 160 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH-H-hhHHHHHHHHHHHHhcc
Confidence 3334456667788899999999999999988776665544443332221 1111111111 1 12333345566899999
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHH
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 373 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 373 (406)
.+.|..+.++.....-.....+|.+...+....++.+.|+++.+...++
T Consensus 161 ~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~ 209 (599)
T PF06609_consen 161 NKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIA 209 (599)
T ss_pred cchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 9999988877765443344456666544433333445555544444443
No 191
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.57 E-value=3.5e-07 Score=88.50 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=89.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc-c---cHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHH-HHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS-P---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-TFWTFGS 74 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a-~---~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~ 74 (406)
+||+.+..+.++..++..+.... + ++..+++.+++.|++.+... ....++.|..|+++||+..++.+ ..+.+|.
T Consensus 279 g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 279 GIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 57888888888888776655553 2 34678889999999987653 44567899999999999999997 6788999
Q ss_pred HHHHHhhHHhccc------chhHHHHHHhhHHHHHH-HHHHHhccCC
Q 015488 75 VSEAALAWIVMPI------LTWRWLLALSAIPAFVL-LIFIVFMPES 114 (406)
Q Consensus 75 ~l~~~l~~~~~~~------~~Wr~~f~i~~ip~~~~-~~~~~~~pES 114 (406)
.++|.+++.+.+. .|||..|.+.++..++. .+..+++||+
T Consensus 359 ~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 359 LLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999887654 57999999887776664 4556677877
No 192
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.56 E-value=2.7e-07 Score=84.82 Aligned_cols=141 Identities=18% Similarity=0.142 Sum_probs=101.7
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
..-.+..++...+.|.+.||+|+|..+++++++.....+.+.+..+-....+.=...........+....+.++.||.+.
T Consensus 113 askA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~ 192 (464)
T KOG3764|consen 113 ASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN 192 (464)
T ss_pred HHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch
Confidence 33346777888899999999999999999887776655554443322211100011111122233445677889999966
Q ss_pred -hhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015488 328 -RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 388 (406)
Q Consensus 328 -R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 388 (406)
|+++.|+.-.+..+|-.++|.+.+.+.+..|+..+|+++++++++.....++..+.+|..+
T Consensus 193 er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 193 ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 7999999999999999999988887777778889999999999999999888875555544
No 193
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.56 E-value=1.7e-06 Score=82.49 Aligned_cols=101 Identities=22% Similarity=0.201 Sum_probs=66.5
Q ss_pred hhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH----HHHHHHH----HHHHHhhhhhhhhhhhcccccC
Q 015488 253 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----LLTALLS----GARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 253 ~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~El~p 324 (406)
...++.++.|+++||+|||+.+..+.++..+.........+.. .....+. ...+......+....+.+|.+|
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 126 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP 126 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC
Confidence 3356888999999999999999888776665544433322110 0001111 1111112234456678899999
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHH
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGL 353 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l 353 (406)
.+.|+...++......+|..+++.+...+
T Consensus 127 ~~~r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 127 PGKRGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888765433
No 194
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.54 E-value=4.2e-06 Score=79.04 Aligned_cols=124 Identities=13% Similarity=0.014 Sum_probs=73.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.....+...++.+..++++||+|||+.+..+.+...+..... ...+............+......+....+..|.+| +
T Consensus 41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~ 118 (355)
T TIGR00896 41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q 118 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c
Confidence 344456778889999999999999999888765544433322 21221111111111111111122334456678887 5
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch--hhHHHHHHHHHHHH
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVL 372 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i 372 (406)
.|+++.|+.+....+|..++|.+.+.+.+..+ ....+...++..++
T Consensus 119 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 119 RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 79999999999888888888888776655432 22334444444333
No 195
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.53 E-value=1e-05 Score=80.06 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhhh-----chHHHHH-HHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 256 PGLLTAALLVDRV-----GRKLSMT-IMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 256 ~g~~~~~~l~dr~-----grR~~~~-~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.+.++.+.++||+ |||+.++ .+.+...++...+.... .+ ...........++..........+.+|.+|.+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5778899999999 9998644 55444444443332221 11 11211222222233333455678889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhh-hchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.|+.+.++.....++|..+++.+...+.+ ..+....|.+.++..++..+...+ .||+.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999999999888777766 345566777777777776555544 46654
No 196
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.51 E-value=3.7e-06 Score=80.70 Aligned_cols=114 Identities=19% Similarity=0.254 Sum_probs=82.2
Q ss_pred chhhHHHHHHHHHHHHHH-h---hcc-cHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015488 3 EGSILGGALVTFVAGLLS-A---FSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 77 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~-~---~a~-~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 77 (406)
|+-++.+.++.+++.++= + ..+ .-+.++++|++.|+|.|...+.-.|++..+.+++|-++++....+..+|..+|
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilG 181 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILG 181 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHh
Confidence 566788888888888654 2 223 57889999999999999888888899999999999999999888888888888
Q ss_pred HHhhHHhcc--cch-----------hHHHHHHhhHHHHHH-HHHHHhccCCcc
Q 015488 78 AALAWIVMP--ILT-----------WRWLLALSAIPAFVL-LIFIVFMPESPR 116 (406)
Q Consensus 78 ~~l~~~~~~--~~~-----------Wr~~f~i~~ip~~~~-~~~~~~~pESp~ 116 (406)
|.+...+.+ ..| +-.+-|+.++..++. .++.+++.|.++
T Consensus 182 p~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 182 PTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 888766532 112 223344555444443 334556777655
No 197
>PTZ00207 hypothetical protein; Provisional
Probab=98.50 E-value=1.8e-05 Score=78.77 Aligned_cols=123 Identities=13% Similarity=0.177 Sum_probs=72.7
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 257 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ------SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 257 g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
..+.+|++.||+|||+++.++.++..+..+...... +.+...+............++.......+.|| +.|++
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 455789999999999999988777766554433321 11111111111111112223344556678897 67999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
+.|+......+|+.+.+.+...++.. +....+++.++..++.+++.+.+.
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~-~~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSD-NTSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhe
Confidence 99999999999887544444333332 233445666666666555555544
No 198
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.49 E-value=3.8e-05 Score=73.73 Aligned_cols=132 Identities=14% Similarity=0.033 Sum_probs=74.8
Q ss_pred hhhHHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhh--
Q 015488 253 AELPGLLTAALLVDRVGRKLSMT-IMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS-- 329 (406)
Q Consensus 253 ~~~~g~~~~~~l~dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~-- 329 (406)
..+.+.+.+++ .||+|||+.++ .+.+..++.........+...................+....+..|..|.+-|.
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAV 142 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHH
Confidence 44556666667 99999998754 443333332222222222111111111111111222344455556666665453
Q ss_pred HHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 330 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 330 ~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
...++.+....+|..++|.+.+.+.+..+....|.+.+..+++.++...++.||.+
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 33467777788899999999887766666666777777777777666666666654
No 199
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.48 E-value=6.7e-06 Score=77.69 Aligned_cols=128 Identities=23% Similarity=0.215 Sum_probs=80.1
Q ss_pred HHHHHHHHhhh-----chHHHHH-HHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 258 LLTAALLVDRV-----GRKLSMT-IMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 258 ~~~~~~l~dr~-----grR~~~~-~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
..+.|.++||+ |||+.++ .+.+..++....+.+.. .. +...........+..........+.+|.+|++.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67889999997 8988754 44444444433333221 11 1111111112222222334557788999999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhch--------hhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH--------QTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.+.|+......+|..+++.+.+.+....+ ....|++.++..++..+...+..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999998888999988888776665544 445666666666666555555556643
No 200
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.47 E-value=2.1e-05 Score=76.56 Aligned_cols=139 Identities=12% Similarity=-0.004 Sum_probs=83.7
Q ss_pred HHHHHhhhhHHHHHHHHHHh----hhchHHHHHHHHH-HHHHHHHHHHhhhhh-------------HHH----HHHHHHH
Q 015488 247 VFITSFAELPGLLTAALLVD----RVGRKLSMTIMFI-FVCIFLLPLVTLQSN-------------ILL----TALLSGA 304 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~d----r~grR~~~~~~~~-~~~~~~~~~~~~~~~-------------~~~----~~~~~~~ 304 (406)
.....+.+++...+.|.++| |+|||+.++.... ...+.+..+.+..+. ... .......
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 34445677888899999999 5999999876433 333333333221110 011 1111111
Q ss_pred HHHhhhhhhhhhhhcccccCcchh--hHHHhHHHHhHhHHHHHHHHHHHHHh--hh--------c-----hhhHHHHHHH
Q 015488 305 RMFSMGTFIIANIFAPEIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGLV--TS--------C-----HQTAAILLLE 367 (406)
Q Consensus 305 ~~~~~~~~~~~~~~~~El~p~~~R--~~a~g~~~~~~~~g~~~~p~~~~~l~--~~--------~-----~~~~~~~~~~ 367 (406)
-+.........-++.+|+.|.+.| ..+.++.+....+|+.+++.+.+... +. . +....|++-+
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDI 204 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHH
Confidence 122333445567789999999876 57888888888888888887654321 10 0 1223466666
Q ss_pred HHHHHHHHHHHhcccccC
Q 015488 368 ALIVLSVVVILLIPFETK 385 (406)
Q Consensus 368 ~~~~i~~~~~~~~~~et~ 385 (406)
++.+++.++..+..+|+.
T Consensus 205 ~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 205 ILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHeeeeeccC
Confidence 777777777777777754
No 201
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.44 E-value=3.2e-05 Score=74.14 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=85.9
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.....+..+.+|+++||+|.|+.+..+.+..+++.....+..+.....++=+..+++....+ ..+.+..+.+|.+.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHH
Confidence 35667788999999999999999998888777766655543332222122112222222233 67788899999999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHH--HHHHH-HHHHHHHHHHHhcc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAA--ILLLE-ALIVLSVVVILLIP 381 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~--~~~~~-~~~~i~~~~~~~~~ 381 (406)
+.|+.++...+|.++++.+.+.+. ..+.... .-+++ +...++.++.+++|
T Consensus 151 atsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998887643 3332211 11223 44455556666665
No 202
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.42 E-value=2.7e-05 Score=74.77 Aligned_cols=138 Identities=12% Similarity=0.112 Sum_probs=76.1
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h-hh---hHHHHHHHH---HHHHHhhhhhhhh
Q 015488 244 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L-QS---NILLTALLS---GARMFSMGTFIIA 315 (406)
Q Consensus 244 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~---~~~~~~~~~~~~~ 315 (406)
........+...++.+..|+++||+|||+.++.+.....+....... . .. ......... ...+......+..
T Consensus 41 g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (396)
T TIGR00882 41 GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAI 120 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhH
Confidence 33445556778889999999999999999987655444332221111 0 00 000111111 1111111112223
Q ss_pred hhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 316 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 316 ~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
..+..|.- +.++...|.....+.+|..++|.+.+.+.+ .+...+|.+.+...++..++.++..||.
T Consensus 121 ~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 121 EAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33333432 223456677888888888899988775544 3555667777777776666655555554
No 203
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.41 E-value=3.7e-07 Score=85.57 Aligned_cols=137 Identities=15% Similarity=0.059 Sum_probs=93.5
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHhhhhhhhhhhhcccccCcchhh
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALL-SGARMFSMGTFIIANIFAPEIYPTSMRS 329 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~El~p~~~R~ 329 (406)
.+...+.+.+.|++.||++|+.++.++..+-.+..+..... ++.+.++++ ......-..+.++...+.++.||...|+
T Consensus 78 ~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs 156 (493)
T KOG1330|consen 78 IVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS-NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRS 156 (493)
T ss_pred HHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhh
Confidence 35567788999999999999999988877766665544433 222222211 1112223445677888999999999999
Q ss_pred HHHhHHHHhHhHHHHHHHHHHHHHhhhch-hhHHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015488 330 TGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGKE 388 (406)
Q Consensus 330 ~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 388 (406)
++.++-|.....|++++-.....+-+..+ +.+.|..-+++.+++++...++.+|...+.
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 99999999999888776444332222222 345677788888888888888777765433
No 204
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.39 E-value=5.6e-05 Score=72.15 Aligned_cols=111 Identities=20% Similarity=0.198 Sum_probs=90.9
Q ss_pred CcchhhHHHHHHHHHHHHHHhhc--ccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCc--chhHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN--RGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a--~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~ 75 (406)
|+|++++++.++..++-++.+.+ .+...+++.=.+.++|.|..- -..+.+.|..|+++ |-...+++..+.++|.+
T Consensus 90 G~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl 169 (498)
T COG3104 90 GTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL 169 (498)
T ss_pred chhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH
Confidence 68999999999999999988887 478999999999999998863 45667889988865 33345677888899999
Q ss_pred HHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhc
Q 015488 76 SEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM 111 (406)
Q Consensus 76 l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~ 111 (406)
++|.+...+.+..||...|.+.++-..+.++.++..
T Consensus 170 ~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 170 IAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999889999999999887665555544443
No 205
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.36 E-value=1.1e-05 Score=80.25 Aligned_cols=138 Identities=19% Similarity=0.156 Sum_probs=88.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL-LTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
+......+++.+|.++.|.++|++|||+.+..+.+...+..+......+... ...-.+. .+...+...+...|.+|+-
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~-G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILT-GLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh-ccchhhhhhcchhhHhhcC
Confidence 4455556788999999999999999999998877666655444443332211 1111111 1222233356788999999
Q ss_pred CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc--hhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 324 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
|++.|+.-.+.......+|..++ ++.++..... ++..++.+..+.+++..+. +++.||+.
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 99999999998888877666665 4545444332 3334555556666666666 55666653
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.35 E-value=1e-05 Score=77.08 Aligned_cols=142 Identities=23% Similarity=0.249 Sum_probs=93.2
Q ss_pred HHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHhhhhh-hhhhhhccc
Q 015488 247 VFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTF-IIANIFAPE 321 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~E 321 (406)
.+..+++.+ ..+++||++||+ |+|+.++.+.++..+--+.+.... .....+.+... ....|.+ +.......|
T Consensus 68 ~~y~slVY~-t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I--~iG~Gl~K~NiS~llg~ 144 (498)
T COG3104 68 SAYGSLVYL-TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALI--IVGTGLFKPNISSLLGE 144 (498)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHH--HhccccccccHHHHHHH
Confidence 333344433 457899999997 999988887665444333322221 11122111111 1122222 445677889
Q ss_pred ccCc--chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015488 322 IYPT--SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 391 (406)
Q Consensus 322 l~p~--~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 391 (406)
+||+ ..|-.+.++-++..++|++++|.+.+++.+..+.+..|...++-..++.+..+..++..++...++
T Consensus 145 ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~ 216 (498)
T COG3104 145 LYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVP 216 (498)
T ss_pred hcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCC
Confidence 9987 347889999999999999999999998888877777788888888888877777665555554443
No 207
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.33 E-value=2e-05 Score=76.23 Aligned_cols=132 Identities=15% Similarity=0.144 Sum_probs=77.6
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hh-HHHH-HHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SN-ILLT-ALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
.+++++|+..+++++||+|||..+.++.+...+..+.+.... +. -..+ .-++.+ ............|..|+-|++
T Consensus 70 ~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~G-l~~gl~~~~~pmyl~E~sP~~ 148 (485)
T KOG0569|consen 70 FIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVG-LACGLSTGLVPMYLTEISPKN 148 (485)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHhHHHHHHHHHHHhhcChhh
Confidence 467889999999999999999888776655544433333211 11 1111 111111 111122345667889999999
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHH-HHHHhhhchhhHHH--HHHHHHHHHHHHHHHhcccccC
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLV-AVGLVTSCHQTAAI--LLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~-~~~l~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.||....+......+|-.++..+ .+.++.... .|++ .+..+.+++..+.. .+.||+.
T Consensus 149 ~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~-~W~~l~~~~~i~~~~~l~~l-~~~PESP 208 (485)
T KOG0569|consen 149 LRGALGTLLQIGVVIGILLGQVLGLPSLLGTED-LWPYLLAFPLIPALLQLALL-PFLPESP 208 (485)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCc-chHHHHHHHHHHHHHHHHHH-hcCCCCc
Confidence 99999888888888877777444 344443322 2333 23334445554444 4446764
No 208
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.31 E-value=0.00043 Score=67.25 Aligned_cols=111 Identities=21% Similarity=0.271 Sum_probs=84.5
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcc---hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG---HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 77 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~---~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 77 (406)
|||..+........+...+..+.. ++.+ + +.|+.-|.. .....|+++.+..++|....++....+..|..++
T Consensus 90 grk~~L~~~~~~~~l~~~~~~~~~-~~~~-~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~ 164 (463)
T KOG2816|consen 90 GRKVVLLLPLFGTILPALCLLFQG-YWFF-L---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG 164 (463)
T ss_pred hhhhhHHHHHHHHHHhHHHHHHHH-HHHh-h---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH
Confidence 688888888888887777766666 3322 2 566544332 3456678999999999999999999899999999
Q ss_pred HHhhHHhcccchhHHHHHHhhHHHHHH-HHHHHhccCCcc
Q 015488 78 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPR 116 (406)
Q Consensus 78 ~~l~~~~~~~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~ 116 (406)
|.++..+....|-=.+|.+..+..++. .+.+.++|||-+
T Consensus 165 p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 165 PALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 998888777777888888888777665 567788999854
No 209
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.26 E-value=0.00013 Score=70.27 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHhhh-----chHH-HHHHHHHHHHHHHHHHHhhh--hhHH-HHHHHHHHHHHhhhhhhhhhhhcccccCc
Q 015488 255 LPGLLTAALLVDRV-----GRKL-SMTIMFIFVCIFLLPLVTLQ--SNIL-LTALLSGARMFSMGTFIIANIFAPEIYPT 325 (406)
Q Consensus 255 ~~g~~~~~~l~dr~-----grR~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 325 (406)
.+...+.|.++||+ |||+ .+..+.+...++...+.... .+.. .........++.....+....+.+|.+|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 45678899999999 8876 45555555554444333321 1111 11111111222223345667888999999
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.|+.+.++......+|..+++.+...+.+. .+....|.+.++..++..+.. +..||++
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~ 185 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPE 185 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCc
Confidence 9999999999988888888888877766653 245556777777666655543 4445653
No 210
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.19 E-value=2e-05 Score=80.20 Aligned_cols=131 Identities=10% Similarity=0.101 Sum_probs=84.4
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh----------------------------h---------
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----------------------------S--------- 293 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~----------------------------~--------- 293 (406)
.++..++.+..+++.||.|||+.+.++.++.++..+.....+ +
T Consensus 78 ~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 157 (633)
T TIGR00805 78 EIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQ 157 (633)
T ss_pred hHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccc
Confidence 355667778899999999999988777666655433322110 0
Q ss_pred --------h--HHHHHHHHHHHH----HhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc--
Q 015488 294 --------N--ILLTALLSGARM----FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-- 357 (406)
Q Consensus 294 --------~--~~~~~~~~~~~~----~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-- 357 (406)
. .....+++...+ .....++....+..|.+|++.|+...|+.+....+|..+++.+.+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d 237 (633)
T TIGR00805 158 CPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVD 237 (633)
T ss_pred cccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccc
Confidence 0 001111112222 122334566789999999999999999999999999999988877655321
Q ss_pred -------------------h-hhHHHHHHHHHHHHHHHHHHhcc
Q 015488 358 -------------------H-QTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 358 -------------------~-~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
+ ++..|++.+++.++.++..++++
T Consensus 238 ~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 238 TGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred cccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1 23346677777777666555554
No 211
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=4.2e-05 Score=74.41 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=96.8
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL--VTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
..+.+++.+.++++.||+|-|+++..+.++.++..+.. ....+.....+.=+..++.....++....+.+.-.|+..|
T Consensus 83 ~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Er 162 (466)
T KOG2532|consen 83 FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNER 162 (466)
T ss_pred HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHH
Confidence 36778899999999999999999988877777654433 2222212222222233333445678888999999999999
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHHHHHHHHhcc
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIP 381 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 381 (406)
++..++.++...+|.+++-.+.+.+-+. .|....|++++++.++-.++.+++.
T Consensus 163 s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 163 STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887677877776 6666788889988887777766654
No 212
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.07 E-value=0.00017 Score=70.14 Aligned_cols=138 Identities=19% Similarity=0.138 Sum_probs=78.1
Q ss_pred HHHHhhhhHHHHHHHHHHhh----hchHHH-HHHHHHHHHHHHHHHHhhhh----hHHHHHH--HHHHHHHhhhhhhhhh
Q 015488 248 FITSFAELPGLLTAALLVDR----VGRKLS-MTIMFIFVCIFLLPLVTLQS----NILLTAL--LSGARMFSMGTFIIAN 316 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr----~grR~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~ 316 (406)
.+..+...+...+.|.++|| +|||+. ++.+.....+....+....+ ....... ................
T Consensus 42 ~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (437)
T TIGR00792 42 LVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYW 121 (437)
T ss_pred HHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHh
Confidence 33345667788899999997 677554 45555555544443332211 1111111 1111111111122345
Q ss_pred hhccccc-CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh-------chhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 317 IFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-------CHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 317 ~~~~El~-p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.+.+|+. +.+.|+...++....+.+|+.+++.+.+++... .+....+.+.++++++..++..+..+|++
T Consensus 122 al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 122 SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 6778887 468899999999988888887776665555432 12234456667776666666666666654
No 213
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.01 E-value=0.00057 Score=65.30 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=66.7
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH-HHHHHHH-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC-IFLLPLV-TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
...+...++..+.+.++||.|||........... ++...+. ...+.+...........+.....+....+..| +.+
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~ 124 (382)
T TIGR00902 47 AALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHH
Confidence 3346667788889999999998654322211111 1111111 11222222111111112222233444445444 256
Q ss_pred hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Q 015488 327 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL 369 (406)
Q Consensus 327 ~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~ 369 (406)
.|+.+.|.....+.+|..++|.+.+.+.+..+....+.+.+..
T Consensus 125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 7899999999999999999999888887766655555554443
No 214
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.98 E-value=1.5e-06 Score=86.13 Aligned_cols=89 Identities=15% Similarity=0.220 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcc------------------
Q 015488 26 YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP------------------ 86 (406)
Q Consensus 26 ~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~------------------ 86 (406)
+..|+++.++.|+|..... ...+|+=|..++++-+...++......+|+++|.+++.....
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~ 220 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPS 220 (539)
T ss_dssp -----------SSS------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCC
Confidence 4679999999999988764 567889999999999999999999999999888877765321
Q ss_pred cch----hHHHHHHhhHHHHHHHHHHHhccCC
Q 015488 87 ILT----WRWLLALSAIPAFVLLIFIVFMPES 114 (406)
Q Consensus 87 ~~~----Wr~~f~i~~ip~~~~~~~~~~~pES 114 (406)
+.. |-.=|++.+...++..+..+.+|++
T Consensus 221 dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 221 DPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 112 4444555555555555556666655
No 215
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00013 Score=71.86 Aligned_cols=130 Identities=18% Similarity=0.091 Sum_probs=90.8
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH--HHhhhhhhhhhhhcccccCcchh
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGAR--MFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~El~p~~~R 328 (406)
..+......+.+.+.||+|.|.+.+.+.+++.+.++...+..+.+.. .+.++.. +.....+...-++.. .+..+.|
T Consensus 91 ~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l-~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR 168 (509)
T KOG2504|consen 91 LGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQL-YLTFGVIGGLGLGLIYLPAVVILG-TYFEKKR 168 (509)
T ss_pred HHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHhhccchhhhcchhhhhh-hHhHHHH
Confidence 34455566788899999999999999887777665554443332222 1111111 111112223333444 4556779
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccc
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 382 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 382 (406)
+.|.|++.+...+|.++-|.+..++++..|+.+...+++.+++-+++....+.|
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999988888888888888888889999888888888888877
No 216
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.93 E-value=0.00015 Score=70.37 Aligned_cols=138 Identities=20% Similarity=0.156 Sum_probs=97.8
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
++..++.+..-|.++||+|||..+....+.+.+-...+.. .. ++... ...........++..+.+.++.-..+.|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~-~~-~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF-QG-YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH-HH-HHHhh-hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 3445667778889999999999988776555443322222 11 22211 111112223445667888999999999999
Q ss_pred HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015488 331 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 391 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 391 (406)
+.|+.+..-+.+..++|...+++....+....+.+-.+..+++.+...++.||+..++.++
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 9999999888888889988887777766666677777888888888888889987766554
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.0016 Score=60.70 Aligned_cols=140 Identities=19% Similarity=0.133 Sum_probs=87.0
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
.+....+...+++..+++.||+|+|+-++.++.+..+...... ...+-......++.........-+..+.+.+.+.
T Consensus 54 qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg 133 (422)
T COG0738 54 QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG 133 (422)
T ss_pred HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC
Confidence 3444466788889999999999999999988777766544332 1111111111111111111111245667778888
Q ss_pred CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhh-------------------chhhHHHHHHHHHHHHHHHHHHhcc-cc
Q 015488 324 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-------------------CHQTAAILLLEALIVLSVVVILLIP-FE 383 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~-------------------~~~~~~~~~~~~~~~i~~~~~~~~~-~e 383 (406)
|.+..+.=.++...+..+|++++|.+...++.. .....+|..++...++..+.....+ ||
T Consensus 134 ~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~ 213 (422)
T COG0738 134 KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPD 213 (422)
T ss_pred CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCc
Confidence 888888888999999999999999998877662 1123466666666655555544433 44
Q ss_pred cCC
Q 015488 384 TKG 386 (406)
Q Consensus 384 t~~ 386 (406)
.+.
T Consensus 214 ~~~ 216 (422)
T COG0738 214 LQV 216 (422)
T ss_pred CCc
Confidence 433
No 218
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.92 E-value=0.0096 Score=56.39 Aligned_cols=103 Identities=25% Similarity=0.228 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcc
Q 015488 7 LGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 86 (406)
Q Consensus 7 ~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 86 (406)
.+..+++.++.++.++++|...=+++-.+.+++.|.+-+...=++...|+. ..+.+..+.+.+.++|+..-..+.+
T Consensus 93 ~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~ 168 (402)
T PF02487_consen 93 LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHFYGKS----SLSAWSSGTGGAGLVGALYYLGLTT 168 (402)
T ss_pred HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHhcCcc----ccccccCCcChhhHHHHHHHHHHHH
Confidence 445667777778889999999888888889888876533221133455542 3556677777777777765544433
Q ss_pred cchh--HHHHHHhh-HHHHHHHHHHHhccCC
Q 015488 87 ILTW--RWLLALSA-IPAFVLLIFIVFMPES 114 (406)
Q Consensus 87 ~~~W--r~~f~i~~-ip~~~~~~~~~~~pES 114 (406)
.++ |..+++.. +|.+.....++.+|.+
T Consensus 169 -~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 169 -LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred -hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 444 66655544 4544444444455544
No 219
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.88 E-value=0.0013 Score=63.03 Aligned_cols=126 Identities=22% Similarity=0.171 Sum_probs=72.6
Q ss_pred HHHHHHHhhhchHHHHHHHHHH-HHHHHHHHH-h-hh-hhH-HHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHh
Q 015488 259 LTAALLVDRVGRKLSMTIMFIF-VCIFLLPLV-T-LQ-SNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAG 333 (406)
Q Consensus 259 ~~~~~l~dr~grR~~~~~~~~~-~~~~~~~~~-~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g 333 (406)
++..+..||.|||+.++....+ ...+...+. . .. ... ..........++....-.....+..|..+.+.++.+.+
T Consensus 57 ~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~ 136 (390)
T TIGR02718 57 LVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNA 136 (390)
T ss_pred HHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHH
Confidence 3335567888999887554322 221222222 1 11 111 11111111111122222345556778888888888877
Q ss_pred HHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 334 VAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 334 ~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.......+|..+++...+.+.+..+...+|.+.++..++..+..++++||+
T Consensus 137 ~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 137 VQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 777777788888887777777766666778888887777766666665553
No 220
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.84 E-value=0.00017 Score=70.54 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=101.2
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
.+..++.+++...++.+.||+.-.+.+..+.+..+++.......++.....++-+...++..+.++..-.+.+.-|..+.
T Consensus 88 t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e 167 (495)
T KOG2533|consen 88 TVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE 167 (495)
T ss_pred HHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh
Confidence 34457788999999999999997776666655555544333333333333333334445556677888889999999999
Q ss_pred hhHHHhHHHHhHhHHHHHHHHHHHHHhh------hchhhHHHHHHHHHHHHHHHHHHhcccccCC
Q 015488 328 RSTGAGVAYAVGRIGGMVCPLVAVGLVT------SCHQTAAILLLEALIVLSVVVILLIPFETKG 386 (406)
Q Consensus 328 R~~a~g~~~~~~~~g~~~~p~~~~~l~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 386 (406)
|++-.|+-++...+|+++++++...+.. ..++.+.|++-++++++.+++.+++.|+...
T Consensus 168 ~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 168 RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999998876532 2234567899999999998888887766443
No 221
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.84 E-value=0.0016 Score=62.28 Aligned_cols=136 Identities=15% Similarity=0.069 Sum_probs=71.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH-HHHHHHHHHHHhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMF-IFVCIFLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
......+...++.++.+.++||.|||....-.. +...+........ .+.+.................+....+..+.
T Consensus 44 ~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~- 122 (382)
T PRK11128 44 LLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW- 122 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-
Confidence 334445667788888999999999853221111 1111111111111 1212211111111111222233344444443
Q ss_pred CcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 324 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.+.|+.+.|.....+.+|..++|.+.+.+.+..+....+.+.++..++..+. .++.||+
T Consensus 123 -~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~ 181 (382)
T PRK11128 123 -QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRPTI 181 (382)
T ss_pred -HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccCCC
Confidence 3457888888899999999999999888777656555666555544444333 3344554
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.82 E-value=0.03 Score=52.72 Aligned_cols=72 Identities=13% Similarity=0.216 Sum_probs=51.3
Q ss_pred HHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccc-hhHHHHHHhhHH
Q 015488 29 LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIP 100 (406)
Q Consensus 29 l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~-~Wr~~f~i~~ip 100 (406)
..+.-.+.|+|.+... ....+..|.+|+++|++..++.....-.|.++++.+...+.+.+ .=|....++..+
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 3444456666666543 44557889999999999999999999999999999887766544 344444444443
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.81 E-value=0.00075 Score=59.82 Aligned_cols=107 Identities=13% Similarity=0.040 Sum_probs=62.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHH-hhhh--hhhhhhhc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN----ILLTALLSGARMF-SMGT--FIIANIFA 319 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~--~~~~~~~~ 319 (406)
.....++...| +..|.+.|+.|.|..+.++.+...+-...+...... .....++...... ...+ .+....-.
T Consensus 43 ~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 33444555554 788999999999999888766655543333321111 1111222111111 1111 23334445
Q ss_pred ccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 320 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 320 ~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
.+-||. .|+++.|+.-....+++.+-..+...+..
T Consensus 122 ~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 122 VRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 588985 79999999999998877766666655544
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.78 E-value=7.4e-07 Score=87.14 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=69.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEIY 323 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 323 (406)
.....++..+|++++|+++||+|||+.+..+.++..+..+...... +.......-+..++...+.......+..|..
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~ 131 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA 131 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444577889999999999999999998887666555444333322 2221111111222223344567788999999
Q ss_pred CcchhhHHHhHHHHhHhHHHHHHHHHH
Q 015488 324 PTSMRSTGAGVAYAVGRIGGMVCPLVA 350 (406)
Q Consensus 324 p~~~R~~a~g~~~~~~~~g~~~~p~~~ 350 (406)
|++.|+...++......+|..++..+.
T Consensus 132 ~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 132 PPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999998888887777776666553
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.74 E-value=0.021 Score=55.06 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=45.3
Q ss_pred cccHHHHHHHHHHhhccCCcchhh-HHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHH
Q 015488 23 SPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI 83 (406)
Q Consensus 23 a~~~~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~ 83 (406)
-+|-+.++..-.+.|+|.+..... ..|++|.++++.+.+..++.=.....+.+.|+.+-..
T Consensus 99 ~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 99 FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 356677888999999998864433 3578999999999999888666666666766655443
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=97.71 E-value=0.00056 Score=66.78 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=71.8
Q ss_pred HHHhhhhHHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhh----hhHHHHHH--HHHHHHHhhhhhhhhhh
Q 015488 249 ITSFAELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQ----SNILLTAL--LSGARMFSMGTFIIANI 317 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr----~grR~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~ 317 (406)
+.-+...+...+.|+++|| +|||+.++ .+.+..++....+.... ........ .................
T Consensus 53 i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a 132 (444)
T PRK09669 53 VVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCA 132 (444)
T ss_pred HHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 3334556677888999998 67765544 45454444443322211 11111111 11111111122233456
Q ss_pred hcccccC-cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-------hhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 318 FAPEIYP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 318 ~~~El~p-~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
+.+|+.+ .+.|....++...++.+|+.+++.+..++....+ ....+.+++++++++.++.++..+|
T Consensus 133 l~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 133 MPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred hHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 7788874 4779999999998888888887765544443221 1123445555555555544444434
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.70 E-value=0.0027 Score=62.41 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=72.2
Q ss_pred hhhhHHHHHHHHHHhhhc-----hHHHHHHHHHHHH-HHHHHHHhhhhh-HHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015488 252 FAELPGLLTAALLVDRVG-----RKLSMTIMFIFVC-IFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYP 324 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~g-----rR~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 324 (406)
+...+-. +.|.++||++ ||+.++.+.++.+ +....+....+. .......+...++....-...-.+..|..+
T Consensus 72 lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~ 150 (468)
T TIGR00788 72 LGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR 150 (468)
T ss_pred HHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh
Confidence 3334444 4899999996 6666666655542 222222211121 122222223323323333456677788888
Q ss_pred cchhhH---HHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 325 TSMRST---GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 325 ~~~R~~---a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+.+.. ..+..+....+|..+++.+.+.+.+..+....+.+.++..++..+. .++.+|.+
T Consensus 151 -~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~ 212 (468)
T TIGR00788 151 -ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SNLSKERR 212 (468)
T ss_pred -cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HHhccccc
Confidence 44433 3344444445788888888887776655556677777777666444 34456764
No 228
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.65 E-value=0.002 Score=65.02 Aligned_cols=90 Identities=12% Similarity=0.178 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhc----cc-----------c--
Q 015488 27 ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM----PI-----------L-- 88 (406)
Q Consensus 27 ~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~----~~-----------~-- 88 (406)
.+++++-++.|+|.... +...+|+=|...+++-....++....-.+|+++|.+++.+.. +. .
T Consensus 238 llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW 317 (735)
T KOG3626|consen 238 LLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW 317 (735)
T ss_pred HHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch
Confidence 36888999999998765 356778889999999899999998888888888888776642 11 1
Q ss_pred --hhHHHHHHhhHHHHHHHHHHHhccCCcc
Q 015488 89 --TWRWLLALSAIPAFVLLIFIVFMPESPR 116 (406)
Q Consensus 89 --~Wr~~f~i~~ip~~~~~~~~~~~pESp~ 116 (406)
-|..=|++.+...++..+.++++|....
T Consensus 318 IGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 318 IGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 3666677777777777777777776643
No 229
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.52 E-value=0.00063 Score=61.89 Aligned_cols=104 Identities=14% Similarity=0.262 Sum_probs=75.1
Q ss_pred HHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccc--hh
Q 015488 13 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL--TW 90 (406)
Q Consensus 13 ~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~--~W 90 (406)
.......--+.++...+-+.-++-|...+.+..-++|+-+..+|+++.+..+......-.|...++.++..+.+.. +.
T Consensus 82 ~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy 161 (433)
T KOG3810|consen 82 GVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSY 161 (433)
T ss_pred hhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccch
Confidence 3444455567788888888888888877777666778889999999999999999999999999998888876533 44
Q ss_pred HHHHHHhhHHHHHHHHHHHhccCCcc
Q 015488 91 RWLLALSAIPAFVLLIFIVFMPESPR 116 (406)
Q Consensus 91 r~~f~i~~ip~~~~~~~~~~~pESp~ 116 (406)
+.+=.+...-..+......++|.-||
T Consensus 162 ~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 162 TTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred hhhchhhHHHHHHHHHHHhhCCCCch
Confidence 44444444444445556667776654
No 230
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.52 E-value=0.0052 Score=58.47 Aligned_cols=137 Identities=19% Similarity=0.214 Sum_probs=63.7
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h-----hhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015488 244 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L-----QSNILLTALLSGARMFSMGTFIIANI 317 (406)
Q Consensus 244 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
....-...+..++...+.|.++||.|.|+-++....+..+...+... . +.+..... ..+..+......+....
T Consensus 46 G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~-iig~i~l~~~f~~~~~~ 124 (412)
T PF01306_consen 46 GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGA-IIGGIYLGLVFNAGVPL 124 (412)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHH-HHTTTTTTTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcccchH
Confidence 33334445667778888999999999776555433322222111111 1 11111111 11111111111111111
Q ss_pred hcccccCc---chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhccccc
Q 015488 318 FAPEIYPT---SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 318 ~~~El~p~---~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 384 (406)
.|.+-. +..+.-.|=..+.|.+|-.++..+.+.+++. +....+.+..+..++..++..+..|+.
T Consensus 125 --~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 125 --SEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp --HHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred --HHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 133322 2234445666667788888888888887763 444444444444444445545555443
No 231
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.0007 Score=64.02 Aligned_cols=95 Identities=15% Similarity=0.056 Sum_probs=62.9
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hhH---HHHHHHH--HHHHHhhhhhhhhhhhc
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNI---LLTALLS--GARMFSMGTFIIANIFA 319 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~--~~~~~~~~~~~~~~~~~ 319 (406)
.....++.+.|.+..|++.||+|||+++...+++..++.+...... ... ...+.++ ...+.+.|=+++..+++
T Consensus 90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~ 169 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM 169 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence 3444577889999999999999999999877776666655333321 111 1111111 11122334478889999
Q ss_pred ccccCcchhhHHHhHHHHhHhH
Q 015488 320 PEIYPTSMRSTGAGVAYAVGRI 341 (406)
Q Consensus 320 ~El~p~~~R~~a~g~~~~~~~~ 341 (406)
+|.-..+.|++-.+...++..+
T Consensus 170 SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 170 SESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred hhhhhhccccceeEEEEEecch
Confidence 9999999999888777665443
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.49 E-value=0.00081 Score=65.32 Aligned_cols=131 Identities=18% Similarity=0.122 Sum_probs=76.8
Q ss_pred hhhHHHHHHHHHHh----hhchHHHHH-HHHHHHHHHHHHHHhhhh----h-H-HHH--HHHHHHHHHhhhhhhhhhhhc
Q 015488 253 AELPGLLTAALLVD----RVGRKLSMT-IMFIFVCIFLLPLVTLQS----N-I-LLT--ALLSGARMFSMGTFIIANIFA 319 (406)
Q Consensus 253 ~~~~g~~~~~~l~d----r~grR~~~~-~~~~~~~~~~~~~~~~~~----~-~-~~~--~~~~~~~~~~~~~~~~~~~~~ 319 (406)
...+...+.|.++| |+|||+.++ .+.+..++....+..... . . ... +.......+.........+..
T Consensus 49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~ 128 (428)
T PF13347_consen 49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALI 128 (428)
T ss_pred hhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcC
Confidence 33444457788899 789887765 455555555554443211 1 1 111 111111111122223456788
Q ss_pred ccccCc-chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-------hhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 320 PEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 320 ~El~p~-~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
+|+.+. +.|....+....++.+|+.+.+.+.+.+.+..+ ......+++++.+++.++..+..+|
T Consensus 129 ~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 129 PELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 999985 689999999999999988766666665553322 2234456666767776676676666
No 233
>PRK11462 putative transporter; Provisional
Probab=97.49 E-value=0.0072 Score=59.30 Aligned_cols=132 Identities=14% Similarity=0.103 Sum_probs=72.9
Q ss_pred hhhhHHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhh--h--hHHHHHHHH--HHHHHhhhhhhhhhhhcc
Q 015488 252 FAELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQ--S--NILLTALLS--GARMFSMGTFIIANIFAP 320 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr----~grR~~~~-~~~~~~~~~~~~~~~~~--~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 320 (406)
+...+.-.+.|.++|| +|||+.++ .+.+..++....++... + ......... ....+........+.+.+
T Consensus 56 i~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~ 135 (460)
T PRK11462 56 ALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGG 135 (460)
T ss_pred HHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3445667778899996 68876665 45455555444333211 1 111111111 111111222233466788
Q ss_pred cccC-cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch-------hhHHHHHHHHHHHHHHHHHHhcccc
Q 015488 321 EIYP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 383 (406)
Q Consensus 321 El~p-~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 383 (406)
|+-+ .+.|++..++-..++.+|+.+++.+..++....+ ......+++++.+++..+.++..+|
T Consensus 136 ~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 136 VITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 8888 5889999999999999988888777655554322 1122344555555555444444444
No 234
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.44 E-value=0.018 Score=53.21 Aligned_cols=133 Identities=19% Similarity=0.094 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh--hhh---cccccCcchh
Q 015488 254 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA--NIF---APEIYPTSMR 328 (406)
Q Consensus 254 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~El~p~~~R 328 (406)
+.+...+.|.+.||+|||+.-+..+++-++..+.........+...-..+ .......++.. |.+ -..=+|.+..
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlg-GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLG-GIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 34444567789999999997766555544443322211111111111111 11111112221 221 1233666665
Q ss_pred hHHHhHHHHh-HhHHHHHHHHHHHHHhhhch--hhHHHHHHHHHHHHHHHHHHhcccccCCc
Q 015488 329 STGAGVAYAV-GRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVVILLIPFETKGK 387 (406)
Q Consensus 329 ~~a~g~~~~~-~~~g~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 387 (406)
+...+..... +.+-++.+..+...+.+..+ ...||..-..+.+++.+++...-+|..|.
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 6666655533 23445555555555544433 34677776666677766666555676554
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.43 E-value=0.0052 Score=60.55 Aligned_cols=104 Identities=12% Similarity=0.017 Sum_probs=57.5
Q ss_pred HHhhhhHHHHHHHHHHh----hhchHHH-HHHHHHHHHHHHHHHHhhh--hhH-HHHHHHHHH---HHHhhhhhhhhhhh
Q 015488 250 TSFAELPGLLTAALLVD----RVGRKLS-MTIMFIFVCIFLLPLVTLQ--SNI-LLTALLSGA---RMFSMGTFIIANIF 318 (406)
Q Consensus 250 ~~~~~~~g~~~~~~l~d----r~grR~~-~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~---~~~~~~~~~~~~~~ 318 (406)
.-+...+...+.|.++| |+|||+. ++.+...+++....++... +.. .....+... ..+...........
T Consensus 51 ~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al 130 (473)
T PRK10429 51 ARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSL 130 (473)
T ss_pred HHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhh
Confidence 33455667777899999 5699554 4555555555444333211 111 111111111 11111222334567
Q ss_pred ccccc-CcchhhHHHhHHHHhHhHHHHHHHHHHHHH
Q 015488 319 APEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 353 (406)
Q Consensus 319 ~~El~-p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l 353 (406)
.+|+- +.+.|....++...++.+|+.+.+.+..++
T Consensus 131 ~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 131 VPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred hHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78988 478899999987777777766665554433
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.38 E-value=0.0026 Score=61.40 Aligned_cols=131 Identities=11% Similarity=0.124 Sum_probs=86.0
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcch
Q 015488 248 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 327 (406)
Q Consensus 248 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 327 (406)
...-.+.++.....+.+.+|+|+-+++..++.....=++.+...++.|....+=+.........|.....|.+...|++.
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l 492 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL 492 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 34446788888999999999999998888765555545544445566554433333334445567777888899999999
Q ss_pred hhHHHhHHHHhHh-HHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHH
Q 015488 328 RSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 328 R~~a~g~~~~~~~-~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 378 (406)
|+++.|+....-. +|=.++.++.+.++...+....|-++++.|++.++...
T Consensus 493 ~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 493 RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999998877532 34344445544444444544556666666665554444
No 237
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.26 E-value=0.0026 Score=57.63 Aligned_cols=103 Identities=27% Similarity=0.368 Sum_probs=75.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc--HHHHHHHHHHhhccCCcc-hhhHHHHHhhcCC-CcchhHHHHHHH-HHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN--YISLLILRGLAGAGLGSG-HVFFSWFMEFVPP-SNRGKWMVVFST-FWTFGSV 75 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~--~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~-~~Rg~~~~~~~~-~~~~G~~ 75 (406)
|||+.++.+.....++.++.++..+ ...+++.|+.+|++.|.. +....++.|+.|+ ++|+...+.... ...+|.+
T Consensus 67 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T COG0477 67 GRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLA 146 (338)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 5677777777665666667777776 999999999999988865 4556778899998 778888888777 5778888
Q ss_pred HHHHhhHHhcc--cchhHHHHHHhhHHHHH
Q 015488 76 SEAALAWIVMP--ILTWRWLLALSAIPAFV 103 (406)
Q Consensus 76 l~~~l~~~~~~--~~~Wr~~f~i~~ip~~~ 103 (406)
+++.++..+.. ..+||+.|.+.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 147 LGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 88766555432 35899977766555433
No 238
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.15 E-value=0.0044 Score=60.80 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHHHHHhh--------cccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHH
Q 015488 4 GSILGGALVTFVAGLLSAF--------SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 74 (406)
Q Consensus 4 ~~~~~~~~~~~i~~~~~~~--------a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 74 (406)
++++.++++..+..+...+ .++-+.+.+.=++.|+..|+.. ..-++++|..|+++.+...+++...--...
T Consensus 350 ~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss 429 (477)
T PF11700_consen 350 RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASS 429 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 6777777777666655555 6778889999999999999865 456789999999999999999999999999
Q ss_pred HHHHHhhHHhcccch-hHHHHHHhhHHHHHHHHHHHhccC
Q 015488 75 VSEAALAWIVMPILT-WRWLLALSAIPAFVLLIFIVFMPE 113 (406)
Q Consensus 75 ~l~~~l~~~~~~~~~-Wr~~f~i~~ip~~~~~~~~~~~pE 113 (406)
.++|.+...+.+..| -|+-++...+..++.+++.+++++
T Consensus 430 ~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 430 WLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 999998888765443 777776665555555555555544
No 239
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.11 E-value=0.075 Score=49.24 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=68.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHH-HhhcCCCcchhHH-HHHHHHH----HHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWF-MEFVPPSNRGKWM-VVFSTFW----TFG 73 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~-~E~~p~~~Rg~~~-~~~~~~~----~~G 73 (406)
|||+.-+..+++.+++++ +-..+++..|+++|++.|++...-. +.=+|+ .|.-..+.+..+. ..+.... .+-
T Consensus 97 Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~v 175 (354)
T PF05631_consen 97 GRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVV 175 (354)
T ss_pred CchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHH
Confidence 799998888888888885 5667899999999999999987653 344564 5764433332322 2222111 122
Q ss_pred HHHHHHhhHHhcccchh--HHHHHHhhHHHHHH-HHHHHhccCCc
Q 015488 74 SVSEAALAWIVMPILTW--RWLLALSAIPAFVL-LIFIVFMPESP 115 (406)
Q Consensus 74 ~~l~~~l~~~~~~~~~W--r~~f~i~~ip~~~~-~~~~~~~pESp 115 (406)
.+.+..++..+.+..+- ..+|........+. .++....+|.+
T Consensus 176 AI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 176 AIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 23444444444443333 66777766555554 33444556653
No 240
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.016 Score=55.86 Aligned_cols=139 Identities=17% Similarity=0.095 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhhh----h-H-HHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015488 254 ELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQS----N-I-LLTALLSGARMFSMGTFIIANIFAPEI 322 (406)
Q Consensus 254 ~~~g~~~~~~l~dr----~grR~~~~-~~~~~~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~El 322 (406)
-.+.-.+.|.++|| +|||+.++ .+.+..++.....+...+ . . .+.+..+....+.........++.+|+
T Consensus 61 DAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~i 140 (467)
T COG2211 61 DAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEI 140 (467)
T ss_pred HHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhh
Confidence 34556677888895 67776654 454555554444433221 1 1 111112222222233334456677888
Q ss_pred cCc-chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchh---h-HHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 015488 323 YPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ---T-AAILLLEALIVLSVVVILLIPFETKGKELVNT 392 (406)
Q Consensus 323 ~p~-~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~---~-~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~ 392 (406)
-+. +.|.+-.+.-..++.+|+++..++.+++++..+. . .........++++.+..++.-..+|.|..+..
T Consensus 141 T~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~ 215 (467)
T COG2211 141 TQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQ 215 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccc
Confidence 766 7899999999999999999888888777654332 1 22333344445544444444445666665433
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.96 E-value=0.001 Score=61.20 Aligned_cols=109 Identities=13% Similarity=0.112 Sum_probs=76.4
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc--H--HHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN--Y--ISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 76 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~--~--~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 76 (406)
|||+++..+.+++.++.++...+++ . ..++.+|++.-.+.+ +.+.|.-|++|.+.|+...|.-....-+|.++
T Consensus 409 GRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fq---vaYvYtPEVyPTavRatgvGtcSsmaRIggI~ 485 (528)
T KOG0253|consen 409 GRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQ---VAYVYTPEVYPTAVRATGVGTCSSMARIGGIF 485 (528)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchhe---EEEEecCcccchhhhhcchhhhhhHHhhhhhh
Confidence 7999999999999999977655543 2 346677776655544 44556679999999999999999999999999
Q ss_pred HHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCC
Q 015488 77 EAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPES 114 (406)
Q Consensus 77 ~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pES 114 (406)
.|.++.- .+ .+=-.+..+.+...++..+..+++|--
T Consensus 486 ~p~iA~~-~e-~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 486 SPVIAMR-AE-LSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhHHHHH-hc-cceeehHHHHHHHHHHHHHHheeeeec
Confidence 9999832 22 222223334444444555556666643
No 242
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.94 E-value=0.11 Score=49.92 Aligned_cols=46 Identities=20% Similarity=0.261 Sum_probs=29.9
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHH
Q 015488 243 VYINVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLLPL 288 (406)
Q Consensus 243 ~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~~~~~~~~~~~~~ 288 (406)
+.....+..+..+++..+.|.++||.++ |+.+....+++++.+...
T Consensus 39 IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 39 IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444445557788899999999999854 555555555555544433
No 243
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.87 E-value=0.3 Score=47.76 Aligned_cols=41 Identities=7% Similarity=-0.164 Sum_probs=37.4
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHh
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~ 354 (406)
+.|.+.+|+++.+.-.+-.++....+++|.++++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999998876654
No 244
>PRK09848 glucuronide transporter; Provisional
Probab=96.86 E-value=0.0062 Score=59.50 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=61.0
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHhhccCCcch-hhHHHHHhhcCC-------CcchhHHHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPP-------SNRGKWMVVFSTFW 70 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~--~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~-------~~Rg~~~~~~~~~~ 70 (406)
++|+.+..+.++..++.++..+.+ +++.+++.-++.|+|.+... ...+...|..|. +++|...+.++...
T Consensus 292 g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~ 371 (448)
T PRK09848 292 GKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTR 371 (448)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHH
Confidence 467788888877777766665543 56777777888888887653 344455666654 35698999999999
Q ss_pred HHHHHHHHHhhHHh
Q 015488 71 TFGSVSEAALAWIV 84 (406)
Q Consensus 71 ~~G~~l~~~l~~~~ 84 (406)
.+|..+++.+...+
T Consensus 372 klg~aig~~i~g~~ 385 (448)
T PRK09848 372 KCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988877654
No 245
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.79 E-value=0.013 Score=56.87 Aligned_cols=132 Identities=25% Similarity=0.233 Sum_probs=77.9
Q ss_pred HHHHHHHHhhh-----chHHHHHHHHHHHHHHHHHHHhh-h---hhHHHHHHHHHHHHHhhhhhhhhhhhccccc---Cc
Q 015488 258 LLTAALLVDRV-----GRKLSMTIMFIFVCIFLLPLVTL-Q---SNILLTALLSGARMFSMGTFIIANIFAPEIY---PT 325 (406)
Q Consensus 258 ~~~~~~l~dr~-----grR~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~---p~ 325 (406)
-.+.|.++|-+ .||+.++++.+++.+....+... . +......+.+...+.....-...-....|.. |.
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 35678999975 35555666666654443333321 1 1122222222222222222333444555654 44
Q ss_pred chhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCcccc
Q 015488 326 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELV 390 (406)
Q Consensus 326 ~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~ 390 (406)
+ |+.-.+.+..+..+|++++..+.+++.+..+....+.+.+.+.++..+..+++.+|.+.++-+
T Consensus 121 ~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~ 184 (433)
T PF03092_consen 121 S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPAD 184 (433)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccc
Confidence 4 778888888888889999888888777766555556677777777777777777774444433
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.66 E-value=0.077 Score=51.54 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=74.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHH-Hh-hhhhHHHHHHHHHHHHHhh--hhhhhhhhhc
Q 015488 246 NVFITSFAELPGLLTAALLVDRVG--RKLSMTIMFIFVCIFLLPL-VT-LQSNILLTALLSGARMFSM--GTFIIANIFA 319 (406)
Q Consensus 246 ~~~~~~~~~~~g~~~~~~l~dr~g--rR~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 319 (406)
.....+++-.+++++.++...|.+ ||++.. +.+++.+..+.. .. ...+.....++.+-.+... +..+..-.|.
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~-s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~ 154 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV-SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYI 154 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcccCHHH-HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHH
Confidence 344456778888899999999988 555444 444443322222 22 1111122223333222222 3334555666
Q ss_pred ccccCcchhhHHHhHHHHhHhHHHHHHHHHHH---HHhhhc---------h-hhHHHHHHHHHHHHHHHHHHhcccccC
Q 015488 320 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV---GLVTSC---------H-QTAAILLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 320 ~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~---~l~~~~---------~-~~~~~~~~~~~~~i~~~~~~~~~~et~ 385 (406)
+..--.+.|.+|.+...+.--+|.+++|.+.. .+.+.. + ...+-.++++..++..++..++..|..
T Consensus 155 a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 155 ADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 76555666777766666644444455554332 232221 1 124567778888888888777665643
No 247
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.62 E-value=0.12 Score=52.90 Aligned_cols=123 Identities=17% Similarity=0.144 Sum_probs=69.7
Q ss_pred HHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhh---h--hH-HHHHH--HHHHHHHhhhhhhhhhhhcccccCcc
Q 015488 256 PGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ---S--NI-LLTAL--LSGARMFSMGTFIIANIFAPEIYPTS 326 (406)
Q Consensus 256 ~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~--~~~~~~~~~~~~~~~~~~~~El~p~~ 326 (406)
+..++++++.|++ ||++.+.++.++..+....+.... . .. ....+ +........++-+.......|.++.+
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 4456888999965 999988776555433222222110 0 00 11111 11111111222244555666777643
Q ss_pred ---hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc-------hhhHHHHHHHHHHHHHHHHHH
Q 015488 327 ---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-------HQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 327 ---~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-------~~~~~~~~~~~~~~i~~~~~~ 378 (406)
.|-....+.++.+++|+++++.+.+++.+.. +.+..|.+.+++++++.++..
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999998888765332 233455555566666555443
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.58 E-value=0.79 Score=44.32 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=62.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH----Hhhhhh--HHHHHHHHHHHHHh-hhhh---hhhh
Q 015488 247 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL----VTLQSN--ILLTALLSGARMFS-MGTF---IIAN 316 (406)
Q Consensus 247 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~-~~~~---~~~~ 316 (406)
-....+.++.|+++..++.+|+|..+.=+++...-..++... ....++ ......++.+.... .|.+ -...
T Consensus 299 R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~ 378 (432)
T PF06963_consen 299 RGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVT 378 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 345557788999999999999998877666554433333221 112211 22222222222211 2332 2345
Q ss_pred hhcccccCcchhhHHHhHHHHhHhHHHHHH
Q 015488 317 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVC 346 (406)
Q Consensus 317 ~~~~El~p~~~R~~a~g~~~~~~~~g~~~~ 346 (406)
-+..|..|.+.|++-.|.-++..++...+.
T Consensus 379 qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 379 QIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred HhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 677899999999999999999998866554
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.49 E-value=0.094 Score=49.95 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=60.5
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHhhh----hhHHHHHHHHHHHHHh-hhhhh--hhhhhcccc
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVTLQ----SNILLTALLSGARMFS-MGTFI--IANIFAPEI 322 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~El 322 (406)
-+++++-.+.+.|+.||.|-|....++....++-... +.... +.....+...+..... ..++. .+.-+..--
T Consensus 89 m~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~W 168 (480)
T KOG2563|consen 89 MVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVW 168 (480)
T ss_pred HHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhh
Confidence 3556777788999999999999888776655442221 11111 1111111112221111 11111 122334456
Q ss_pred cCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 323 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 323 ~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
||+..|++|..+..+.+.+|..++-.+-+.++.
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 999999999999999988887776555443443
No 250
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.36 E-value=0.019 Score=54.70 Aligned_cols=106 Identities=20% Similarity=0.219 Sum_probs=79.1
Q ss_pred hhhHHHHHHHHHHHHHH---hhcccH------HHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCc---chhHHHHHHHHH
Q 015488 4 GSILGGALVTFVAGLLS---AFSPNY------ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFW 70 (406)
Q Consensus 4 ~~~~~~~~~~~i~~~~~---~~a~~~------~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~ 70 (406)
|+++++.++..++.++. +.-.+. ..++++-++.++|.|+. +...+...|-+++++ |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788888888888773 222233 57899999999999887 455667788877763 445567788899
Q ss_pred HHHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHH
Q 015488 71 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV 109 (406)
Q Consensus 71 ~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~ 109 (406)
++|.+++..+...+-+..+|.+.|++.++..++.+..++
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 999999988887777888999999998877766554443
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.98 E-value=0.029 Score=54.46 Aligned_cols=106 Identities=16% Similarity=0.142 Sum_probs=80.7
Q ss_pred hhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHH-HHHHHHHHHHHHHhh
Q 015488 4 GSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF-STFWTFGSVSEAALA 81 (406)
Q Consensus 4 ~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~-~~~~~~G~~l~~~l~ 81 (406)
+++.+++..+.+=-+.-...+|.|+-.-.-+++|+..+... ...+|++..+||+.|..+.++. ..+..+|--+|++++
T Consensus 437 ~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIG 516 (618)
T KOG3762|consen 437 NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIG 516 (618)
T ss_pred ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhh
Confidence 33444444444434455667899999999999999998875 4567899999999999998887 455688888999999
Q ss_pred HHhcccchhHHHHHHhhHHHHHHHHHHH
Q 015488 82 WIVMPILTWRWLLALSAIPAFVLLIFIV 109 (406)
Q Consensus 82 ~~~~~~~~Wr~~f~i~~ip~~~~~~~~~ 109 (406)
+.+....+=|..|.+.++-.++.+..+.
T Consensus 517 G~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 517 GFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9988888888888888777666544443
No 252
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.73 E-value=0.19 Score=47.42 Aligned_cols=80 Identities=13% Similarity=0.163 Sum_probs=52.0
Q ss_pred hhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHH--HHHHHhcccccCCcc
Q 015488 311 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS--VVVILLIPFETKGKE 388 (406)
Q Consensus 311 ~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~et~~~~ 388 (406)
..+......+|..|.+.|+.+.++....--+|-+++..+.+.+++........-++..+.++. ..+...+..|.|..+
T Consensus 106 s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~ 185 (403)
T PF03209_consen 106 SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSR 185 (403)
T ss_pred hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Confidence 345567788999999999999999999988888888888887777543222222222222222 122234556776665
Q ss_pred cc
Q 015488 389 LV 390 (406)
Q Consensus 389 ~~ 390 (406)
..
T Consensus 186 ~~ 187 (403)
T PF03209_consen 186 RA 187 (403)
T ss_pred cc
Confidence 55
No 253
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.58 E-value=0.68 Score=41.02 Aligned_cols=55 Identities=15% Similarity=0.302 Sum_probs=37.2
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHhhHHh-----cccchhHHHHHHhhHHHHHHHHHHHhc
Q 015488 57 SNRGKWMVVFSTFWTFGSVSEAALAWIV-----MPILTWRWLLALSAIPAFVLLIFIVFM 111 (406)
Q Consensus 57 ~~Rg~~~~~~~~~~~~G~~l~~~l~~~~-----~~~~~Wr~~f~i~~ip~~~~~~~~~~~ 111 (406)
|+|+..+.+...++++|.++....-..- ....+||+.+.+.++..++-++.+..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778888888888999988765432111 113469999999887776655555544
No 254
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.47 E-value=3.6 Score=42.25 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=70.8
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc--------HHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCc---chhHHHHHHH
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN--------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFST 68 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~--------~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~ 68 (406)
||++++.++.++..++-.+.+++.. ...++++=.+..+|.|+. +...+...|-.++++ |-.+..++..
T Consensus 52 G~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~ 131 (654)
T TIGR00926 52 GKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYF 131 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHH
Confidence 6888999999888888876665421 123445555555666664 334455666666543 4555667777
Q ss_pred HHHHHHHHHHHhhHHhcc-------cchhHHHHHHhhHHHHHHHHHH
Q 015488 69 FWTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLIFI 108 (406)
Q Consensus 69 ~~~~G~~l~~~l~~~~~~-------~~~Wr~~f~i~~ip~~~~~~~~ 108 (406)
+.++|.+++..+...+.. ..+|...|.+.++..++.++..
T Consensus 132 ~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 132 AINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 778888888777665542 3469999999887766654443
No 255
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.42 E-value=0.27 Score=43.67 Aligned_cols=111 Identities=20% Similarity=0.180 Sum_probs=71.8
Q ss_pred hhhHHHHHHHHHHHHHHhh-------cccHHHHHHHHHHhhccCCcc-hhhHHHHHhhcCCCcchhHHHHHHHHHHHHHH
Q 015488 4 GSILGGALVTFVAGLLSAF-------SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 75 (406)
Q Consensus 4 ~~~~~~~~~~~i~~~~~~~-------a~~~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 75 (406)
.++.++.+...++-.+... .++++.+.+.-++.|.|.... .+......+.+| ++||...++.-.+..++..
T Consensus 67 ~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaa 145 (250)
T PF06813_consen 67 VVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAA 145 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHH
Confidence 3445555555554433322 246778888888777765432 222223346777 5799999999999999988
Q ss_pred HHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCc
Q 015488 76 SEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 115 (406)
Q Consensus 76 l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp 115 (406)
+-..+...+-+...-+.+..+...|.++.++..+++.+-|
T Consensus 146 i~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 146 IFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 8777766666556677777777778777665555554433
No 256
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.88 E-value=0.25 Score=45.70 Aligned_cols=75 Identities=19% Similarity=0.294 Sum_probs=52.7
Q ss_pred hhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhc----------------hhhHHHHHHHHHHHHHHH
Q 015488 312 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC----------------HQTAAILLLEALIVLSVV 375 (406)
Q Consensus 312 ~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~----------------~~~~~~~~~~~~~~i~~~ 375 (406)
.+..+.+.+++.|.+.+++..++..++..+|.+++|.+...+.... +...+|.+++.+.++..+
T Consensus 28 q~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 28 QVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred HhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778888999999999999999999999999999998776321 223566656655444444
Q ss_pred HHHhc-ccccCC
Q 015488 376 VILLI-PFETKG 386 (406)
Q Consensus 376 ~~~~~-~~et~~ 386 (406)
...+. .||.+.
T Consensus 108 ~~~~~~~p~~~~ 119 (310)
T TIGR01272 108 IFAFLPLPELQE 119 (310)
T ss_pred HHHHccCCCCCc
Confidence 43333 455443
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.64 E-value=0.19 Score=41.10 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=63.6
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchh-hHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHh
Q 015488 2 EEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 80 (406)
Q Consensus 2 rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 80 (406)
.|.+++++.+.+.+-... -+-++.+.++.+-.+.|+|.+.... -..++.|..++++|++..+++-.....+.+.|..+
T Consensus 66 ~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 66 PKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 467777777777655543 3567788999999999999987644 34678899999999999988877777788888777
Q ss_pred hHHh
Q 015488 81 AWIV 84 (406)
Q Consensus 81 ~~~~ 84 (406)
.+++
T Consensus 145 ~~~~ 148 (156)
T PF05978_consen 145 LFFI 148 (156)
T ss_pred HHHH
Confidence 6654
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.45 E-value=1.4 Score=39.28 Aligned_cols=103 Identities=25% Similarity=0.267 Sum_probs=58.4
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhhhhhhhcccccCc-chh
Q 015488 252 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIANIFAPEIYPT-SMR 328 (406)
Q Consensus 252 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~-~~R 328 (406)
+....+....|.+.||.|||+.+..+...............+ ...................+....+.+|.+|. ..|
T Consensus 50 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 129 (338)
T COG0477 50 LGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATER 129 (338)
T ss_pred HHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHH
Confidence 444556689999999999997776655432221111111111 11111111111222223445677888899998 678
Q ss_pred hHHHhHHHH-hHhHHHHHHHHHHHHHh
Q 015488 329 STGAGVAYA-VGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 329 ~~a~g~~~~-~~~~g~~~~p~~~~~l~ 354 (406)
+...+.... ...++..++|.+.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 130 GLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887 45566777775554443
No 259
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.39 E-value=1.7 Score=35.65 Aligned_cols=98 Identities=12% Similarity=0.052 Sum_probs=56.3
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhH
Q 015488 251 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 330 (406)
Q Consensus 251 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 330 (406)
.....+++++++.+.+++|.|+.++++.+.-.+......... ............+.....+..-..+..|.-+.+.|++
T Consensus 47 Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~-~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN-SYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGR 125 (156)
T ss_pred HHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhh
Confidence 344566778889999999999999887665554443332222 1111111111112222234444556677777788887
Q ss_pred HHhHHHHhHhHHHHHHHHH
Q 015488 331 GAGVAYAVGRIGGMVCPLV 349 (406)
Q Consensus 331 a~g~~~~~~~~g~~~~p~~ 349 (406)
-.|+--.+...+.+++..+
T Consensus 126 ~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 126 NTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777666666555555443
No 260
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=94.15 E-value=0.25 Score=46.76 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=81.8
Q ss_pred chhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 015488 3 EGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 81 (406)
Q Consensus 3 r~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~ 81 (406)
|+.+.++.++.++.++..-+...-..+.++=.+.|...|+.. ..-+|+.+..|+++-++..++++..--.+..++|.+.
T Consensus 318 k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 318 KPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred ceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 567788888888888777677666777788889999998875 4567999999999999999999999999999999887
Q ss_pred HHhccc-chhHHHHHHhhHHHHHHHHHHHhccCC
Q 015488 82 WIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPES 114 (406)
Q Consensus 82 ~~~~~~-~~Wr~~f~i~~ip~~~~~~~~~~~pES 114 (406)
..+.+. .+=|.-+....+...+-++....+|+.
T Consensus 398 ~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 398 AVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 765432 234554443333333334445555543
No 261
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.91 E-value=4.8 Score=38.56 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=64.1
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHHHHh
Q 015488 259 LTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAV 338 (406)
Q Consensus 259 ~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~ 338 (406)
+....+.|.+|-|++++...+...+.-..+.+..+-.....+-+... ...++-...+.|.=-..|++.--++.+.+.+.
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg-~~~a~evay~sYiys~v~~~~yq~vts~~raa 137 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG-LATAAEVAYYSYIYSVVDKEHYQKVTSYTRAA 137 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH-HHHHHHHHHHHHheeecCHHHHHHHHHHHHHH
Confidence 45668899999999998876655544443333332211111111111 11122223344444556777767777777776
Q ss_pred HhHHHHHHHHHHHHHhhhch-hhHHH-HHHHHHHHHHHHHHHhcccccC
Q 015488 339 GRIGGMVCPLVAVGLVTSCH-QTAAI-LLLEALIVLSVVVILLIPFETK 385 (406)
Q Consensus 339 ~~~g~~~~p~~~~~l~~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~et~ 385 (406)
.-+|.+++..+...+....+ ..... .+-.+...++.++.+++|+.+|
T Consensus 138 ~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 138 TLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 66666666555443333222 22122 2222444555566667665443
No 262
>PF12832 MFS_1_like: MFS_1 like family
Probab=91.26 E-value=3.3 Score=29.30 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=27.0
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH
Q 015488 243 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMF 278 (406)
Q Consensus 243 ~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~ 278 (406)
+.....+.-+..+++..+.|.++||.+|++......
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 334444455778889999999999999998776543
No 263
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.67 E-value=1.4 Score=41.95 Aligned_cols=64 Identities=23% Similarity=0.211 Sum_probs=54.4
Q ss_pred hhcccHHHHHHHHHHhhccCCcchhh-HHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHh
Q 015488 21 AFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 84 (406)
Q Consensus 21 ~~a~~~~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 84 (406)
-+.+|.+..++.-+..|+..|..++. +..+.|-.|+++|-..++....+-++|.++++.++..+
T Consensus 330 ~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 330 RFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45688999999999999988887764 44567888999999999999999999999999887654
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=87.76 E-value=30 Score=34.20 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=31.8
Q ss_pred HHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcc
Q 015488 50 FMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 86 (406)
Q Consensus 50 ~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 86 (406)
..|.++.++=.|..++++.+-++|.++++.+...+.+
T Consensus 169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999998887766544
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=87.59 E-value=3.3 Score=39.31 Aligned_cols=66 Identities=15% Similarity=0.121 Sum_probs=48.8
Q ss_pred hhhhhhcccccCcc---hhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHH
Q 015488 313 IIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 313 ~~~~~~~~El~p~~---~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 378 (406)
+......+|.|+.+ .|..+..+-+...++|+.+++...+++.+..+.+..|.+.++..+++.+..+
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 45566777888775 5788888999999999999988888877766666667776666666655443
No 266
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.56 E-value=29 Score=32.70 Aligned_cols=128 Identities=16% Similarity=0.086 Sum_probs=68.0
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
+..++--..+.....+.+|+|-++.+..+++...+-... -...+......-.......+...+.......-|-||.++
T Consensus 55 LPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i-R~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~- 132 (395)
T COG2807 55 LPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI-RSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV- 132 (395)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH-HhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-
Confidence 333444445667788889999888777665443332211 111111111111111111111223334455668888875
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHHHHHHHH
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVIL 378 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~ 378 (406)
+..+|+-...-.+++.+++-+..++-+.. +......+++..++++.++.+
T Consensus 133 ~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 133 GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 45556666666666667766666655443 345667778888877766543
No 267
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.94 E-value=26 Score=31.60 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=36.3
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcch-hhHHH-HHhhc
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSW-FMEFV 54 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~-~~~~~-~~E~~ 54 (406)
|||++=..-++.+++++ ++-.+|.|..++++|.+-|++...-. ..-+| +.|.-
T Consensus 100 GRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 100 GRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred ccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 57776555555555444 46778899999999999999876543 33355 45765
No 268
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=84.15 E-value=46 Score=32.95 Aligned_cols=42 Identities=14% Similarity=-0.056 Sum_probs=37.0
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
..|.+.+|.++.+.-.+-.++....+++|.++++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999998887765544
No 269
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=83.75 E-value=53 Score=33.29 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=71.7
Q ss_pred CcchhhHHHHHHHHHHHHHHhhccc-------------------------HHHHHHHHHHhhccCCcc-hhhHHHHHhhc
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPN-------------------------YISLLILRGLAGAGLGSG-HVFFSWFMEFV 54 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~-------------------------~~~l~~~R~l~G~g~g~~-~~~~~~~~E~~ 54 (406)
||-.++.++.++..++..+..++.. ...++...-+..+|.|+. +....+-+|-.
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 4666777777777777533221111 124555555666677664 33334444544
Q ss_pred C----CCcch--hHHHHHHHHHHHHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCcchhhcc
Q 015488 55 P----PSNRG--KWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK 121 (406)
Q Consensus 55 p----~~~Rg--~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp~~l~~~ 121 (406)
+ ++.++ ....++....+.|.+++..+-..+-+..+|.+-|.+..+.-.+.++ .+++-+|.|-..+
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~--iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL--IFLPGFPFYRYKK 252 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH--HHHcCceeEEeeC
Confidence 4 33344 5567888888999888776555554678999999887666544433 3456666666554
No 270
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=83.05 E-value=21 Score=34.62 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=52.7
Q ss_pred CcchhhHH-HHHHHHHHHHHHhhcccHHH------------HHHHHHHhhccC---Cc---chhhHHHHHhhcCCCcchh
Q 015488 1 MEEGSILG-GALVTFVAGLLSAFSPNYIS------------LLILRGLAGAGL---GS---GHVFFSWFMEFVPPSNRGK 61 (406)
Q Consensus 1 ~rr~~~~~-~~~~~~i~~~~~~~a~~~~~------------l~~~R~l~G~g~---g~---~~~~~~~~~E~~p~~~Rg~ 61 (406)
|||+.++. ......++.++.+++..+.. .-+.-++.|+.. .. ....-.++.+...+++|.+
T Consensus 99 GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~ 178 (498)
T KOG0637|consen 99 GRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT 178 (498)
T ss_pred ccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh
Confidence 67777666 44555566678888776544 333444455432 11 1123346777766655555
Q ss_pred -HHHHHHHHHHHHHHHHHHhhHHhcccchhHH
Q 015488 62 -WMVVFSTFWTFGSVSEAALAWIVMPILTWRW 92 (406)
Q Consensus 62 -~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~ 92 (406)
+.+++..+..+|..++..+. .+.+|+-
T Consensus 179 ~Ans~f~~f~avGnvLGY~~g----~y~~~~~ 206 (498)
T KOG0637|consen 179 RANSVFSFFMAVGNVLGYALG----SYLGLYK 206 (498)
T ss_pred ccchhHHHHHHhcceeeeecc----cccCceE
Confidence 88899999998888766544 3445654
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.10 E-value=55 Score=32.27 Aligned_cols=37 Identities=3% Similarity=-0.032 Sum_probs=32.2
Q ss_pred HHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhc
Q 015488 49 WFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 85 (406)
Q Consensus 49 ~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~ 85 (406)
+..|.++.++=.|..+++..+-++|.++++.+...+.
T Consensus 153 fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 153 FANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999998776653
No 272
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.45 E-value=13 Score=33.85 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcccch---hHHHHHHh-hHH
Q 015488 26 YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT---WRWLLALS-AIP 100 (406)
Q Consensus 26 ~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~---Wr~~f~i~-~ip 100 (406)
+..-++.-.+.|++..... ..-+.+.-+.|.++-|...++.+...++|..+.+.+++++.+..| |--.|.+. +..
T Consensus 352 ~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~ 431 (459)
T KOG4686|consen 352 FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLM 431 (459)
T ss_pred hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHH
Confidence 3334555566776643322 122335677899999999999999999999999999999876543 54444444 334
Q ss_pred HHHH
Q 015488 101 AFVL 104 (406)
Q Consensus 101 ~~~~ 104 (406)
++..
T Consensus 432 aL~s 435 (459)
T KOG4686|consen 432 ALTS 435 (459)
T ss_pred HHHH
Confidence 4443
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=78.36 E-value=0.76 Score=42.46 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=2.3
Q ss_pred hhhhh-hhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHH
Q 015488 308 SMGTF-IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPL 348 (406)
Q Consensus 308 ~~~~~-~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~ 348 (406)
.+|.. +....+.++..+++.|-.+..+...+-.+|-.++..
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp ------HHHH--------------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 456777888898888888777766665555444443
No 274
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.17 E-value=57 Score=30.14 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhcc---
Q 015488 10 ALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP--- 86 (406)
Q Consensus 10 ~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~--- 86 (406)
.++.+.+-.+.++++|.++=+.+-.+.-++-|.+-+.+.-++-..|+.. .+.++.+.+...++|+. +|...+
T Consensus 99 v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~----i~~WSSGTGgAGliGa~-SYa~lT~~~ 173 (409)
T KOG3880|consen 99 VLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSIV----IAGWSSGTGGAGLIGAS-SYAFLTSWA 173 (409)
T ss_pred HHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCce----eccccCCCCcchhhhhh-HHHHHhhhc
Confidence 4444555567789999998888888877776654222211222223322 22333344444444443 343332
Q ss_pred cchhHHHHHHh-hHHHHHHHHHHHhccC
Q 015488 87 ILTWRWLLALS-AIPAFVLLIFIVFMPE 113 (406)
Q Consensus 87 ~~~Wr~~f~i~-~ip~~~~~~~~~~~pE 113 (406)
...=|...++. .+|.++++..++.+++
T Consensus 174 ~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 174 NLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 23456666655 5676665444444433
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=76.91 E-value=77 Score=30.93 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=29.5
Q ss_pred hhhhh-hhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHH
Q 015488 308 SMGTF-IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLV 349 (406)
Q Consensus 308 ~~~~~-~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~ 349 (406)
.+|.. +....+.++..+++.|-.+..+...+-.+|-.++..+
T Consensus 385 tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 385 SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 4566778899999999888888877766665555544
No 276
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=76.56 E-value=17 Score=26.24 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=34.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 015488 245 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ 292 (406)
Q Consensus 245 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~ 292 (406)
+..-.+.++.++|.+...++.++.++|+.+..+.+.+.+....+....
T Consensus 31 ~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 31 WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455678888888888888887778888887777776666555443
No 277
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=73.32 E-value=46 Score=32.83 Aligned_cols=22 Identities=5% Similarity=0.208 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHhccccc
Q 015488 363 ILLLEALIVLSVVVILLIPFET 384 (406)
Q Consensus 363 ~~~~~~~~~i~~~~~~~~~~et 384 (406)
..+++.+.++.-+.+.++..|.
T Consensus 203 l~fwg~~~l~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 203 LKFWGWVFLIVTILVAFFKKEK 224 (544)
T ss_pred HHHHHHHHHHHHHHHheEeecc
Confidence 3467777777777777776554
No 278
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=72.89 E-value=1e+02 Score=30.42 Aligned_cols=35 Identities=6% Similarity=0.008 Sum_probs=30.2
Q ss_pred HhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHhc
Q 015488 51 MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 85 (406)
Q Consensus 51 ~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~ 85 (406)
.|.+..++-.|..++++.+.+++.++++.+...+.
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57777888899999999999999999988877764
No 279
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=72.50 E-value=98 Score=30.12 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=33.8
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHh
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 379 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 379 (406)
....+...+...-+--+..+++|++.+.+....+......+.++..+++...=++
T Consensus 144 ~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 144 PGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444578999999987766555545556666666666555444
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=71.04 E-value=13 Score=34.03 Aligned_cols=75 Identities=21% Similarity=0.133 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHhhccCCcchhh-HHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHh
Q 015488 10 ALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 84 (406)
Q Consensus 10 ~~~~~i~~~~~~~a~~~~~l~~~R~l~G~g~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 84 (406)
++++.+.-.+-.+.++++.-++.-+.-|+=-|+.++. +.-+.+-.++++|-..++....+-++|..+++.++..+
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 3444455555668899999999999999876777664 33467778888999999999999999999988887654
No 281
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=68.43 E-value=16 Score=28.17 Aligned_cols=49 Identities=16% Similarity=0.280 Sum_probs=26.6
Q ss_pred cchhHHHHHHhhH-----HHHH-HHHHHHhccCCcchhhccCChhhHHHHHHHHH
Q 015488 87 ILTWRWLLALSAI-----PAFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIA 135 (406)
Q Consensus 87 ~~~Wr~~f~i~~i-----p~~~-~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~ 135 (406)
.+--|..+.+..+ +.++ -+++++.+|+.|......+..+.+.+.++++.
T Consensus 33 ~~~VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 33 VKLVRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 3344665554332 2233 35667788988865444444455666665554
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.00 E-value=64 Score=31.61 Aligned_cols=100 Identities=13% Similarity=0.032 Sum_probs=61.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCcchh
Q 015488 249 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 328 (406)
Q Consensus 249 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 328 (406)
+....-.+.+++++.+.|++|.|..++++...-..+-..............-...+ +.....+..-..|.+|..+.+.+
T Consensus 58 iiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG-~Gaallw~GqG~ylt~~st~~ti 136 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLG-FGAALLWTGQGGYLTSNSTRETI 136 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhh-hhHHheecccceehhhcCChhhH
Confidence 33445567788999999999999999987655555444333322111111111111 11111233345688899988888
Q ss_pred hHHHhHHHHhHhHHHHHHHHH
Q 015488 329 STGAGVAYAVGRIGGMVCPLV 349 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~ 349 (406)
.+-.++.-+++..+.+++..+
T Consensus 137 e~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 137 ERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred HHHHHHHHHHHHHHHHhhhHh
Confidence 888888888887766666544
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=66.48 E-value=13 Score=33.44 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=13.1
Q ss_pred HHHHHHhhhchHHHHHH
Q 015488 260 TAALLVDRVGRKLSMTI 276 (406)
Q Consensus 260 ~~~~l~dr~grR~~~~~ 276 (406)
+.|-+.||-|||+.-+.
T Consensus 91 ivgSLaDkqGRKracvt 107 (454)
T KOG4332|consen 91 IVGSLADKQGRKRACVT 107 (454)
T ss_pred HHHHHHhhhccccceee
Confidence 45678899999986544
No 284
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=62.01 E-value=33 Score=26.67 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=19.4
Q ss_pred ccchhHHHHHHhhHH-----HHH-HHHHHHhccCCcchh
Q 015488 86 PILTWRWLLALSAIP-----AFV-LLIFIVFMPESPRYL 118 (406)
Q Consensus 86 ~~~~Wr~~f~i~~ip-----~~~-~~~~~~~~pESp~~l 118 (406)
+.+-.|..|.+..+. .++ -+++++.+|+.|.-.
T Consensus 27 ~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~~ 65 (121)
T TIGR02978 27 EVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPINL 65 (121)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcccc
Confidence 444568877765432 222 355677889888643
No 285
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=56.86 E-value=16 Score=24.52 Aligned_cols=40 Identities=18% Similarity=0.175 Sum_probs=29.0
Q ss_pred hhcccHHHHHHHHHHhhccCCcchhhHHHHHhhcCCCcch
Q 015488 21 AFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRG 60 (406)
Q Consensus 21 ~~a~~~~~l~~~R~l~G~g~g~~~~~~~~~~E~~p~~~Rg 60 (406)
+..-++..+..--..-|++.|.......+++|+.+++.+|
T Consensus 23 ~i~i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 23 MIFINITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 3345677777777777777777766677899999986655
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=56.02 E-value=75 Score=30.41 Aligned_cols=223 Identities=18% Similarity=0.108 Sum_probs=0.0
Q ss_pred ccccchhhhccccccccccchhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhh
Q 015488 164 ETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASV 243 (406)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 243 (406)
++.+.+.+....+.+++..+.-.+. .+..++....+.+++..+.+-+--.. ..|.+. ......
T Consensus 1 ~~~~~~~e~~~~~~~~~~~~~~~~~-~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL---------------~ak~vS 63 (510)
T KOG3574|consen 1 TGQEIDLESLNVDPNANWFKKTHQT-LKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLL---------------QAKGVS 63 (510)
T ss_pred CCcccchhhhcCCCCCchhhhcchh-hhhhhhhHHHHHHHHHHcCCchhHhh-hhHHHh---------------cCCCcc
Q ss_pred HHHHHHHHhhhhHHH--HHHHHHHh-----hhchHHHHHH-HHHHHHHHHHHHHhhhhhHHH-----------HHHHHHH
Q 015488 244 YINVFITSFAELPGL--LTAALLVD-----RVGRKLSMTI-MFIFVCIFLLPLVTLQSNILL-----------TALLSGA 304 (406)
Q Consensus 244 ~~~~~~~~~~~~~g~--~~~~~l~d-----r~grR~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 304 (406)
|....+.+...-|-+ ++...++| |+|||+.+++ +..+.+.++..+....+.+.. ...++..
T Consensus 64 yt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LL 143 (510)
T KOG3574|consen 64 YTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLL 143 (510)
T ss_pred hhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHH
Q ss_pred HHHhhhhhhhhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh-------hchhh---------HHHHHHHH
Q 015488 305 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-------SCHQT---------AAILLLEA 368 (406)
Q Consensus 305 ~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~-------~~~~~---------~~~~~~~~ 368 (406)
-+....--...-.+.-.+..++.-+-|.......-++|-+++-.++..+.. ....+ ..+.+.+.
T Consensus 144 nflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~ 223 (510)
T KOG3574|consen 144 NFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGA 223 (510)
T ss_pred HHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHH
Q ss_pred HHHHHHHHHHhcccccCCcccccccccccccccce
Q 015488 369 LIVLSVVVILLIPFETKGKELVNTIDGVSNSKQVL 403 (406)
Q Consensus 369 ~~~i~~~~~~~~~~et~~~~~~~~~~~~~~~~~~~ 403 (406)
+.+++-....++..|....--+|......+..|++
T Consensus 224 ~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l 258 (510)
T KOG3574|consen 224 LFIVATTLVALLKKENDESVDEELELGIHESYKLL 258 (510)
T ss_pred HHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHH
No 287
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=52.82 E-value=52 Score=31.14 Aligned_cols=46 Identities=13% Similarity=0.017 Sum_probs=22.2
Q ss_pred HHhhcCCCcc-hhHHHHHHHHHHHHHHHHHHhhHHhcc-cchhHHHHH
Q 015488 50 FMEFVPPSNR-GKWMVVFSTFWTFGSVSEAALAWIVMP-ILTWRWLLA 95 (406)
Q Consensus 50 ~~E~~p~~~R-g~~~~~~~~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~ 95 (406)
+.|..-.|.- -..+--++.....|.+.-|.+-|.-.- ..+|+...-
T Consensus 259 ~~E~~L~~Yv~v~~G~~~G~lia~~~l~~p~~~Y~~~f~~~~~~~~i~ 306 (374)
T PF01528_consen 259 VIEVVLARYVKVQFGPHLGTLIACGILGLPAIRYENRFVAANLHTGIA 306 (374)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4677655432 222222344445555555666554322 456766544
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.65 E-value=60 Score=24.49 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=32.7
Q ss_pred cchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhch--hhHHHHHHHHHHHHHHHH
Q 015488 325 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVV 376 (406)
Q Consensus 325 ~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~i~~~~ 376 (406)
++.++.+.++-.+.-.+++++.....+++.+... .+|..+++-.+.+.+.+.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4567777777777777888888878888887643 233344444444444433
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=49.15 E-value=2.8e+02 Score=27.61 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=25.0
Q ss_pred HHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 015488 48 SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALA 81 (406)
Q Consensus 48 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~ 81 (406)
-|.....++++++.+..-..++.+.|..++..+-
T Consensus 141 GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 141 GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 3555666888899888888888888887766543
No 290
>PRK03612 spermidine synthase; Provisional
Probab=48.24 E-value=3e+02 Score=27.60 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=18.5
Q ss_pred hHHHhHHHHhHhHHHHHHHHHHHHHh
Q 015488 329 STGAGVAYAVGRIGGMVCPLVAVGLV 354 (406)
Q Consensus 329 ~~a~g~~~~~~~~g~~~~p~~~~~l~ 354 (406)
+...|-.++.+.+|+++++++.+.++
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 45567788888888888777766544
No 291
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.02 E-value=92 Score=32.45 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=36.0
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhH-HHHHHHHHHHHHhhh
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTS 356 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~-g~~~~p~~~~~l~~~ 356 (406)
....+.--..|.+.|+.|.|+..++-|+ |.+-+|+++++++|.
T Consensus 606 p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 606 PGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred cceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 3455666789999999999999999886 777899999988864
No 292
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=43.38 E-value=40 Score=22.59 Aligned_cols=30 Identities=17% Similarity=0.375 Sum_probs=18.6
Q ss_pred ccchhHHHHHHhhHH---H-HHHHHHHHhccCCc
Q 015488 86 PILTWRWLLALSAIP---A-FVLLIFIVFMPESP 115 (406)
Q Consensus 86 ~~~~Wr~~f~i~~ip---~-~~~~~~~~~~pESp 115 (406)
+..-+|..|.+..+. . ++-++.++.+|+.|
T Consensus 27 d~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 27 DPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred CHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 444578888776553 2 22355667788876
No 293
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=37.73 E-value=30 Score=33.67 Aligned_cols=37 Identities=8% Similarity=0.006 Sum_probs=27.7
Q ss_pred hhhhhhhhhcccccCcchhhH-HHhHHHHhHhHHHHHH
Q 015488 310 GTFIIANIFAPEIYPTSMRST-GAGVAYAVGRIGGMVC 346 (406)
Q Consensus 310 ~~~~~~~~~~~El~p~~~R~~-a~g~~~~~~~~g~~~~ 346 (406)
.+....-.+.+++.....+.+ |.+....+..+|+.++
T Consensus 158 ~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLG 195 (498)
T KOG0637|consen 158 TLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLG 195 (498)
T ss_pred hhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceee
Confidence 445566778888888877777 8888888777777665
No 294
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=37.38 E-value=2.2e+02 Score=23.22 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=40.8
Q ss_pred HHHhhhchHHHHHHHHHH-HHHHHHHHH--hh-hh--h-HHHHHHHHHHHHHhhhhhhhhhhhcccccCcchhhHHHhHH
Q 015488 263 LLVDRVGRKLSMTIMFIF-VCIFLLPLV--TL-QS--N-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVA 335 (406)
Q Consensus 263 ~l~dr~grR~~~~~~~~~-~~~~~~~~~--~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~a~g~~ 335 (406)
.++||+-||..+..+.=. .++..+... .. .. . ...+.++....+|..+...+.|.+.+-.-..+.-++..|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 567999999877553221 122111111 11 11 0 11122223333444555566666666666666677777777
Q ss_pred HHhHhHHH
Q 015488 336 YAVGRIGG 343 (406)
Q Consensus 336 ~~~~~~g~ 343 (406)
.+--+++-
T Consensus 136 e~~~N~~r 143 (153)
T PF11947_consen 136 EFKRNWGR 143 (153)
T ss_pred HHHHhHHH
Confidence 76655543
No 295
>PRK03612 spermidine synthase; Provisional
Probab=33.55 E-value=3.7e+02 Score=26.96 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=28.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhHHh-cccch-hHHHHHHhhHHHHHH
Q 015488 59 RGKWMVVFSTFWTFGSVSEAALAWIV-MPILT-WRWLLALSAIPAFVL 104 (406)
Q Consensus 59 Rg~~~~~~~~~~~~G~~l~~~l~~~~-~~~~~-Wr~~f~i~~ip~~~~ 104 (406)
-|...+-....-.+|.++|+++..++ .+..| ++..+.+..+-.++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 35566777778888888888876654 34444 555555554443333
No 296
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=32.73 E-value=3.7e+02 Score=24.13 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 015488 254 ELPGLLTAALLVDRVGRKLSMTIMFIFVCI 283 (406)
Q Consensus 254 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~ 283 (406)
..++.+.+-.++.|+.-|.+.+.+.+++.+
T Consensus 253 T~lAVigGk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 253 TGLAVIGGKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred HHHHHhhhHHHhhhheeEEEEEecchhHHH
Confidence 334445566777888777766555444443
No 297
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=30.41 E-value=79 Score=30.82 Aligned_cols=61 Identities=21% Similarity=0.170 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHHhhccCCcchh-hHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHh
Q 015488 24 PNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 84 (406)
Q Consensus 24 ~~~~~l~~~R~l~G~g~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 84 (406)
+|-+..++.-++.|+..|-... ...+--+..++++|-.+..+...+..+|..+|+.++..+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666677788999998886543 344455778889999999999999999999998877654
No 298
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=29.12 E-value=1.7e+02 Score=19.22 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhHHhcccchhHHHHHHhhHHHHHHHHHHHhccCCc
Q 015488 71 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 115 (406)
Q Consensus 71 ~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~~~~~~~~~~pESp 115 (406)
-+|.+++...+......++.+....+..+.+++...+.-.+|.+|
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344454444444444466788887787777777666555666654
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.92 E-value=1.4e+02 Score=22.59 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=13.4
Q ss_pred HHHHHHHhhh-chHHHHHHHH
Q 015488 259 LTAALLVDRV-GRKLSMTIMF 278 (406)
Q Consensus 259 ~~~~~l~dr~-grR~~~~~~~ 278 (406)
...||+.||+ |..+..++.+
T Consensus 60 a~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHH
Confidence 3556888987 7777655533
No 300
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=27.12 E-value=4e+02 Score=22.80 Aligned_cols=43 Identities=9% Similarity=0.227 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCccccccccccccccccee
Q 015488 362 AILLLEALIVLSVVVILLIPFETKGKELVNTIDGVSNSKQVLV 404 (406)
Q Consensus 362 ~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~~~~~~~~~~~ 404 (406)
.+-+-|+..+...-+-+....+.+.+.-++..++.++.+++.|
T Consensus 71 af~IaGGiiL~~ia~~ml~~~~~~~~~~~~~~~~~~~~~~~ai 113 (203)
T PF01914_consen 71 AFRIAGGIILFLIALEMLFGSPSSEKSSPDEKEEAKDAEDIAI 113 (203)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccccchhhhhccccccee
Confidence 4556665555554455555433332233333333344444443
No 301
>PHA03237 envelope glycoprotein M; Provisional
Probab=26.73 E-value=4.4e+02 Score=25.55 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=14.2
Q ss_pred HHhhcCCCc-chhHHHHHHHHHHHHHHHHHHhhHH
Q 015488 50 FMEFVPPSN-RGKWMVVFSTFWTFGSVSEAALAWI 83 (406)
Q Consensus 50 ~~E~~p~~~-Rg~~~~~~~~~~~~G~~l~~~l~~~ 83 (406)
+.|..-.|. |-...--++.....|.+..|..-|.
T Consensus 276 v~E~vL~rYv~vl~G~~lG~lia~~~l~~p~~~Y~ 310 (424)
T PHA03237 276 IVEFVVSRYVHVLPGPALGLLIAYGMLAVTTHDYF 310 (424)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Confidence 467765443 2222222233334444444444443
No 302
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=26.59 E-value=1.1e+02 Score=23.13 Aligned_cols=30 Identities=13% Similarity=0.367 Sum_probs=20.2
Q ss_pred cchhHHHHHHhhHHHHHH-HHHHHhccCCcc
Q 015488 87 ILTWRWLLALSAIPAFVL-LIFIVFMPESPR 116 (406)
Q Consensus 87 ~~~Wr~~f~i~~ip~~~~-~~~~~~~pESp~ 116 (406)
..+|+.++++....+++. .+.+.+.||+..
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 458999988876665554 445556787653
No 303
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=25.19 E-value=5.4e+02 Score=23.67 Aligned_cols=82 Identities=21% Similarity=0.195 Sum_probs=39.5
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHhcccccCCccccccc
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTI 393 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~ 393 (406)
..+.|+.-=+|-...+.|==++..+. |.++.... ++.+.....+..+..+..+.+....+++. .++.|++
T Consensus 133 ~g~~YTgGp~PlgY~gLGEi~~~vff---G~l~v~g~-~yiqt~~~~~~~ll~slp~gil~~~Il~a------NNirDie 202 (303)
T COG1575 133 AGILYTGGPFPLGYMGLGEIFVGVFF---GPLIVLGA-YYIQTGRLSWAILLPSLPVGILIANILLA------NNLRDIE 202 (303)
T ss_pred heeeeccCCcCcccCCHHHHHHHHHH---HHHHHHHH-HHHhcccchHHHHHHHHHHHHHHHHHHHh------cccccch
Confidence 34555555566666555433332222 22222222 22333333333344444444433333332 4667788
Q ss_pred ccccccccceee
Q 015488 394 DGVSNSKQVLVV 405 (406)
Q Consensus 394 ~~~~~~~~~~~~ 405 (406)
+|.++.|+-|.|
T Consensus 203 ~D~~~gk~TLav 214 (303)
T COG1575 203 EDIRNGKYTLAV 214 (303)
T ss_pred hHHhcCCcceee
Confidence 888888876654
No 304
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.57 E-value=4.7e+02 Score=27.43 Aligned_cols=41 Identities=12% Similarity=-0.082 Sum_probs=27.2
Q ss_pred CcchhhHHHHHHHHHHHHHHhhcccHH-HHHHHHHHhhccCC
Q 015488 1 MEEGSILGGALVTFVAGLLSAFSPNYI-SLLILRGLAGAGLG 41 (406)
Q Consensus 1 ~rr~~~~~~~~~~~i~~~~~~~a~~~~-~l~~~R~l~G~g~g 41 (406)
+|.+.++++.+.+.++++...+...+. .+...=++.+++.+
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 478889999999999988777655444 44444444444443
No 305
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=24.44 E-value=6.5e+02 Score=24.31 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=24.1
Q ss_pred HHHHhhhhh-hhhhhhcccccCcchhhHHHhHHHHhHhH
Q 015488 304 ARMFSMGTF-IIANIFAPEIYPTSMRSTGAGVAYAVGRI 341 (406)
Q Consensus 304 ~~~~~~~~~-~~~~~~~~El~p~~~R~~a~g~~~~~~~~ 341 (406)
.....+|.. +....+.++..|++.+-.|..+...+--.
T Consensus 352 ~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~ 390 (406)
T KOG1479|consen 352 LLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVG 390 (406)
T ss_pred HHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHH
Confidence 333445554 44577888999998887776665555433
No 306
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=24.01 E-value=29 Score=31.91 Aligned_cols=62 Identities=23% Similarity=0.211 Sum_probs=1.3
Q ss_pred cccHHHHHHHHHHhhccCCcch-hhHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHhhHHh
Q 015488 23 SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 84 (406)
Q Consensus 23 a~~~~~l~~~R~l~G~g~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 84 (406)
-+|-+.+++.-++.|+.-|-.. ....+..+..++++|..+..+...+..+|..+|+.++..+
T Consensus 245 ~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 245 FNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp ----------------------HHHH-------------------------------------
T ss_pred ccchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455667778888888888654 3444556888899999999999999999999998877653
No 307
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=23.68 E-value=2.9e+02 Score=19.94 Aligned_cols=40 Identities=18% Similarity=-0.018 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhcccchhHHHHHHhhHHHH
Q 015488 63 MVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 102 (406)
Q Consensus 63 ~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ip~~ 102 (406)
.++...+..+|.++|++++..+......|..+....+...
T Consensus 29 ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~ 68 (85)
T PF06779_consen 29 AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTV 68 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 4566667777888887777665444445555555444433
No 308
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.50 E-value=2.1e+02 Score=22.79 Aligned_cols=22 Identities=27% Similarity=0.271 Sum_probs=17.2
Q ss_pred HHhhcCCCcchhHHHHHHHHHH
Q 015488 50 FMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 50 ~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+.|++|+..|....+.++....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 5699999999988777665444
No 309
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=22.98 E-value=98 Score=18.58 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=17.6
Q ss_pred hhhccCChhhHHHHHHHHHHHc
Q 015488 117 YLCTKGRITDAHNILDKIAQFN 138 (406)
Q Consensus 117 ~l~~~~~~~~a~~~l~~~~~~~ 138 (406)
.+...|+.++|.+.+++..+.+
T Consensus 10 ~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 10 AYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred HHHHcCCHHHHHHHHHHHHHHC
Confidence 3456799999999999987654
No 310
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=22.76 E-value=4.1e+02 Score=25.28 Aligned_cols=14 Identities=7% Similarity=0.178 Sum_probs=8.3
Q ss_pred hcccchhHHHHHHh
Q 015488 84 VMPILTWRWLLALS 97 (406)
Q Consensus 84 ~~~~~~Wr~~f~i~ 97 (406)
+.+....|-+|.+.
T Consensus 36 if~~~~f~kPFfiT 49 (416)
T KOG2765|consen 36 IFEDYNFRKPFFIT 49 (416)
T ss_pred HHhhcccCCceeEe
Confidence 34455676666655
No 311
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=22.24 E-value=2.3e+02 Score=22.76 Aligned_cols=28 Identities=7% Similarity=0.217 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHhccccc-CCccccc
Q 015488 364 LLLEALIVLSVVVILLIPFET-KGKELVN 391 (406)
Q Consensus 364 ~~~~~~~~i~~~~~~~~~~et-~~~~~~~ 391 (406)
.-+++..++..+....+.||. |.|+.+|
T Consensus 99 ~~IAg~~lv~filmvVLiPEpg~QRS~~D 127 (144)
T PF01350_consen 99 GQIAGVLLVFFILMVVLIPEPGKQRSQQD 127 (144)
T ss_pred HHhHHHHHHHHHHHHhcccCCCCcCCccc
Confidence 334555555555555555664 5565554
No 312
>KOG2513 consensus Protein required for meiotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning]
Probab=21.48 E-value=3e+02 Score=27.90 Aligned_cols=28 Identities=21% Similarity=0.443 Sum_probs=16.2
Q ss_pred HHHHHhccCCcchhhcc--CChhhHHHHHH
Q 015488 105 LIFIVFMPESPRYLCTK--GRITDAHNILD 132 (406)
Q Consensus 105 ~~~~~~~pESp~~l~~~--~~~~~a~~~l~ 132 (406)
+.+...+||+|+|.... .++-++++..+
T Consensus 587 flis~vipe~p~wva~~~~k~~~~~~e~~~ 616 (647)
T KOG2513|consen 587 FLISSVIPESPRWVAAGIAKAEFQAREAFK 616 (647)
T ss_pred HHHHHhcCCChHHHHHHHHHHHHHHHHhhh
Confidence 34455689999998642 22234444444
No 313
>PF12854 PPR_1: PPR repeat
Probab=21.48 E-value=62 Score=18.39 Aligned_cols=16 Identities=31% Similarity=0.931 Sum_probs=13.0
Q ss_pred hccCChhhHHHHHHHH
Q 015488 119 CTKGRITDAHNILDKI 134 (406)
Q Consensus 119 ~~~~~~~~a~~~l~~~ 134 (406)
.+.|+.++|.+.++++
T Consensus 18 Ck~G~~~~A~~l~~~M 33 (34)
T PF12854_consen 18 CKAGRVDEAFELFDEM 33 (34)
T ss_pred HHCCCHHHHHHHHHhC
Confidence 4679999999988764
No 314
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=21.30 E-value=3.2e+02 Score=20.71 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=10.5
Q ss_pred HHHHhhccC-CcchhhHHHHHhhcC
Q 015488 32 LRGLAGAGL-GSGHVFFSWFMEFVP 55 (406)
Q Consensus 32 ~R~l~G~g~-g~~~~~~~~~~E~~p 55 (406)
.|.+.+.|. |+.....++..|...
T Consensus 55 ~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 55 VYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHhhHccccccHHHHHHHHHH
Confidence 344444444 333344445555543
No 315
>PHA03242 envelope glycoprotein M; Provisional
Probab=20.85 E-value=4.6e+02 Score=25.42 Aligned_cols=33 Identities=21% Similarity=0.011 Sum_probs=14.8
Q ss_pred HHhhcCCCc-chhHHHHHHHHHHHHHHHHHHhhH
Q 015488 50 FMEFVPPSN-RGKWMVVFSTFWTFGSVSEAALAW 82 (406)
Q Consensus 50 ~~E~~p~~~-Rg~~~~~~~~~~~~G~~l~~~l~~ 82 (406)
+.|..-.|. |-...--++.....|.+..|.+-|
T Consensus 273 v~E~vL~~Yv~vl~G~~lG~lia~~~l~~p~~rY 306 (428)
T PHA03242 273 VVEGVLSHYVRVLPGPHLGALVAAGIVGVAAHRY 306 (428)
T ss_pred HHHHHHHHhhhccccchHHHHHHHHHHHHHHHHH
Confidence 467755443 222222233344445555555555
No 316
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.84 E-value=2.4e+02 Score=22.62 Aligned_cols=22 Identities=32% Similarity=0.480 Sum_probs=17.1
Q ss_pred HHhhcCCCcchhHHHHHHHHHH
Q 015488 50 FMEFVPPSNRGKWMVVFSTFWT 71 (406)
Q Consensus 50 ~~E~~p~~~Rg~~~~~~~~~~~ 71 (406)
+.|++|+..|......++....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 5799999999988777665444
No 317
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=20.22 E-value=8.7e+02 Score=24.21 Aligned_cols=42 Identities=17% Similarity=-0.066 Sum_probs=35.7
Q ss_pred hhhhhcccccCcchhhHHHhHHHHhHhHHHHHHHHHHHHHhh
Q 015488 314 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 355 (406)
Q Consensus 314 ~~~~~~~El~p~~~R~~a~g~~~~~~~~g~~~~p~~~~~l~~ 355 (406)
..|....|+...+.-.+=.++.+..++++..++..+..++.+
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 578889999999999999999999999988888877766544
Done!