Query 015489
Match_columns 406
No_of_seqs 152 out of 174
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 13:31:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 92.1 0.31 1.1E-05 42.6 6.7 125 206-343 87-216 (255)
2 2ffu_A Ppgalnact-2, polypeptid 89.0 1.1 3.7E-05 44.4 8.2 137 206-344 145-293 (501)
3 3f1y_A Mannosyl-3-phosphoglyce 88.9 1.2 4E-05 44.0 8.4 193 131-342 93-310 (387)
4 1xhb_A Polypeptide N-acetylgal 88.8 0.51 1.7E-05 46.1 5.7 138 206-345 113-262 (472)
5 2d7i_A Polypeptide N-acetylgal 88.2 1.2 4.2E-05 45.4 8.3 211 131-345 111-342 (570)
6 2z86_A Chondroitin synthase; G 81.1 13 0.00044 37.5 11.8 99 131-234 374-481 (625)
7 3bcv_A Putative glycosyltransf 64.1 4.8 0.00016 34.5 3.4 108 131-243 4-120 (240)
8 2z86_A Chondroitin synthase; G 63.0 2.3 7.7E-05 43.0 1.2 210 131-345 92-334 (625)
9 4fix_A UDP-galactofuranosyl tr 60.8 9.1 0.00031 40.3 5.4 132 207-341 268-417 (657)
10 2bo4_A Mannosylglycerate synth 48.3 16 0.00054 36.4 4.5 180 134-334 2-210 (397)
11 1omz_A Alpha-1,4-N-acetylhexos 37.1 45 0.0015 32.4 5.6 100 132-235 28-134 (293)
12 2ls4_A High affinity copper up 35.0 12 0.0004 24.5 0.0 15 18-32 5-19 (26)
13 2nxv_A ATP synthase subunits r 27.4 38 0.0013 30.2 3.1 29 206-234 73-101 (249)
14 3l7i_A Teichoic acid biosynthe 26.1 14 0.00048 38.5 0.0 32 206-237 82-113 (729)
15 2c0n_A A197; thermophil protei 25.9 24 0.00082 33.0 1.5 31 206-240 52-85 (203)
16 3sd4_A PHD finger protein 20; 25.1 38 0.0013 25.7 2.3 14 161-174 42-55 (69)
17 2eqm_A PHD finger protein 20-l 20.8 50 0.0017 26.6 2.2 14 161-174 49-62 (88)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.06 E-value=0.31 Score=42.57 Aligned_cols=125 Identities=9% Similarity=-0.089 Sum_probs=66.3
Q ss_pred cCccEEEEecCcccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCCcc
Q 015489 206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKH-GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAA 284 (406)
Q Consensus 206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTg 284 (406)
+..|||++.|+|..++.-.++++++.++++ +..+..+....- .....+..+..........-... ..
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-----~~ 154 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY-------HLNENRDIVKETVRPAAQVTWNA-----PC 154 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE-------EEC---CEEEEEEECCCSCBSCC-----TT
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE-------EeCCCCcchhhccCchHHHHHhh-----cC
Confidence 578999999999999988899999999876 666655543210 00000111111000000000000 01
Q ss_pred eEEEeeccccHHHHHHHh-hh--h-cCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeecC
Q 015489 285 FVEIMATVFSREAWRCVW-YM--I-QNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGV 343 (406)
Q Consensus 285 FVEiMAPVFSR~Awrcvw-~m--i-qNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g~ 343 (406)
++-..+-+|+|++++.+- .+ . ..+.....+-|+.+...+... .++..++...+.|+..
T Consensus 155 ~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~~ 216 (255)
T 1qg8_A 155 AIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYIT 216 (255)
T ss_dssp TSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEEC
T ss_pred CCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEEc
Confidence 111123478999998764 33 0 112222345676554444323 3699999988888643
No 2
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=88.99 E-value=1.1 Score=44.44 Aligned_cols=137 Identities=9% Similarity=0.039 Sum_probs=73.6
Q ss_pred cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecCCcceeeeecccc-----Ccc
Q 015489 206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG--WLTWQMT----KRRNDTEVHTQTEERE-----GWC 274 (406)
Q Consensus 206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~~~~vHr~~~~~~-----g~C 274 (406)
+..|||++.|+|..++.-.++++++.+++..-.+..|.++.-. .+.+.-. ...-...++.+....+ .+-
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQ 224 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTS
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhcc
Confidence 5789999999999999999999999999887777777653211 1111000 0000000000000000 000
Q ss_pred CCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCccee-hhhhhchhhhcCCCCeEEEEeeeeEEeecCC
Q 015489 275 AETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDAQWIVHQGVP 344 (406)
Q Consensus 275 ~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~~~~C~~~~~~kiGVVDa~~VvH~g~P 344 (406)
.++..+-.+.++-..+=+|+|+++..+=.+ ++....| |=|+-+..-+.....+|.++....|.|..+.
T Consensus 225 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--de~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~ 293 (501)
T 2ffu_A 225 GNPVAPIKTPMIAGGLFVMDKFYFEELGKY--DMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK 293 (501)
T ss_dssp SCTTSCEECSSCCSSSEEEEHHHHHHTTCC--CTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred CCCCCcccCccccceEEEEEHHHHHHhCCC--CccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 011111001111111237899999887533 3434567 4555443222224579999999999997544
No 3
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=88.89 E-value=1.2 Score=43.99 Aligned_cols=193 Identities=10% Similarity=0.033 Sum_probs=100.8
Q ss_pred CCceEEEEEeccccccchhHHhhcc-------ccCcEEEEEEECCCCCccccc--ccccceEEEE------eeccccccc
Q 015489 131 RPKYLVTFTVGFDLKHNIDAAVKKF-------SENFTIMLFHYDGRTSDWEEF--EWSKRAIHVS------ARKQTKWWY 195 (406)
Q Consensus 131 ~~k~Lla~~VG~~qk~~vd~~v~kf-------~~nF~vmLFhYDG~~~~W~d~--eWs~~aiHv~------a~kqtKWw~ 195 (406)
.++..|++++ ++...++..+++.. +.+|.|+ +.=||++|+=.++ ++..+.++.. ..+++|-.-
T Consensus 93 ~p~vSVVIP~-yNe~~~l~~~l~sl~~~l~~~~~~~EII-VVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPS-RNVADTVGGIIDEIHALNERAPLIDQIL-VVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEE-SSCTTTHHHHHHHHHHHHHHSCCCSEEE-EEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEc-CCCHHHHHHHHHHHHHHHhcCCCCeEEE-EEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4677888888 55556666665554 3467776 5668988764432 1222211110 013333222
Q ss_pred cccccCcccccCccEEEEecCccc-CCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeecc----
Q 015489 196 AKRFLHPDIVASYDYIFIWDEDLG-VENFNGEEYIKLVRKH-GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEE---- 269 (406)
Q Consensus 196 akRFLHPdiva~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~---- 269 (406)
.+.-+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+................ +.....+.+....
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~-~~~~g~v~~~~~~~l~~ 246 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE-EDGGGRVTELTAKPLFN 246 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C-CBCCSHHHHHTHHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc-cccCCchhhhhHHHHHH
Confidence 11111 1257999999999999 8999999999988765 56655543321100000000 1111111100000
Q ss_pred --ccCccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhch-hhhcC-CCCeEEEEeeeeEEeec
Q 015489 270 --REGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALR-KCVEP-AHEKIGVVDAQWIVHQG 342 (406)
Q Consensus 270 --~~g~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~-~C~~~-~~~kiGVVDa~~VvH~g 342 (406)
.+..+ .-.-|+++|. +|+|++++.+ .+ ..|||.|..+. +++.. .-++|.=|+-.+..|..
T Consensus 247 ~~~~~l~--~~~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 247 LFYPELA--GFVQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHCGGGT--TCSCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHhHhhc--cccccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000 1112234442 6899999876 33 36899987653 33222 22358888888888853
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=88.82 E-value=0.51 Score=46.09 Aligned_cols=138 Identities=9% Similarity=0.007 Sum_probs=70.3
Q ss_pred cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCcceeeeeccccC-----cc
Q 015489 206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPN--GWLTWQ----MTKRRNDTEVHTQTEEREG-----WC 274 (406)
Q Consensus 206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~C 274 (406)
+..|||++.|+|..++.-.++++++.+++..-.+..|.++.- ..+.+. .+...-...++.+....+. .-
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 568999999999999999999999999887665655654311 111110 0000000000000000000 00
Q ss_pred CCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceeh-hhhhchhhhcCCCCeEEEEeeeeEEeecCCC
Q 015489 275 AETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDAQWIVHQGVPS 345 (406)
Q Consensus 275 ~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~~~~C~~~~~~kiGVVDa~~VvH~g~Pt 345 (406)
.+...+-.+.++-..+=+|+|++|+.+=.+ ++....|| =|+-+..-+.....++.++....|.|....+
T Consensus 193 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--de~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 193 GDRTLPVRTPTMAGGLFSIDRDYFQEIGTY--DAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TCTTSCEECSBCCSSSEEEEHHHHHHTTSC--CTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred CCCCCcccCccccceeEEEEHHHHHHcCCC--CCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 000001011111111235799999887433 33334664 3433332222245799999999999976554
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.25 E-value=1.2 Score=45.42 Aligned_cols=211 Identities=10% Similarity=0.039 Sum_probs=100.2
Q ss_pred CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEECCCCCcc-cc-c-cccc--ceEEEEeeccccccccccc
Q 015489 131 RPKYLVTFTVGFDLKHN----IDAAVKKFSEN--FTIMLFHYDGRTSDW-EE-F-EWSK--RAIHVSARKQTKWWYAKRF 199 (406)
Q Consensus 131 ~~k~Lla~~VG~~qk~~----vd~~v~kf~~n--F~vmLFhYDG~~~~W-~d-~-eWs~--~aiHv~a~kqtKWw~akRF 199 (406)
.|+.-|++++=-..... ++++.+.=..+ |.|+ +.=||+.|+- .+ + ++.. .-|++...... -=++...
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EII-VVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIV-LVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEE-EEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEE-EEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHH
Confidence 45677777774332133 33333332334 4666 5568887765 21 1 1100 12443322111 0011111
Q ss_pred cCcccccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecC-Cccee-eeecccc
Q 015489 200 LHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG--WLTWQMT----KRRN-DTEVH-TQTEERE 271 (406)
Q Consensus 200 LHPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~-~~~vH-r~~~~~~ 271 (406)
..-=-.+..|||++.|+|..++.-.++++++.+++..--+..|.++.-. .+.+... .+.. ...+. ++.....
T Consensus 189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (570)
T 2d7i_A 189 MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPP 268 (570)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCT
T ss_pred HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccch
Confidence 1111235689999999999999999999999998765445555442111 1111100 0000 00000 0000000
Q ss_pred C-ccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCccee-hhhhhchhhhcCCCCeEEEEeeeeEEeecCCC
Q 015489 272 G-WCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDAQWIVHQGVPS 345 (406)
Q Consensus 272 g-~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~~~~C~~~~~~kiGVVDa~~VvH~g~Pt 345 (406)
. .-.++..+--+.++-..+=+|+|++|+.+=.+ ++....| |=|+-+..-+.....+|.++....|.|..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--De~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 269 ELQKADPSDPFESPVMAGGLFAVDRKWFWELGGY--DPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp TTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSS--CTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred hhhccCCCcceecccccceEEEEEHHHHHhcCCC--CCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 0 00000001011111122346899999887443 3444567 44555443333356799999999999975544
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=81.10 E-value=13 Score=37.47 Aligned_cols=99 Identities=18% Similarity=0.112 Sum_probs=55.7
Q ss_pred CCceEEEEEeccccccchhHHhhccc----cCcEEEEEEECCCCCcccc-c-cc---ccceEEEEeeccccccccccccC
Q 015489 131 RPKYLVTFTVGFDLKHNIDAAVKKFS----ENFTIMLFHYDGRTSDWEE-F-EW---SKRAIHVSARKQTKWWYAKRFLH 201 (406)
Q Consensus 131 ~~k~Lla~~VG~~qk~~vd~~v~kf~----~nF~vmLFhYDG~~~~W~d-~-eW---s~~aiHv~a~kqtKWw~akRFLH 201 (406)
.++.-+++++ ++....+..+++-.- .+|.|++ .=||+.|+=.+ + ++ ..+...+...++++-.-.+.-+
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~- 450 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV- 450 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence 4556666665 555566666655552 5788774 45677764221 1 11 1122333333333211111111
Q ss_pred cccccCccEEEEecCcccCCCCChHHHHHHHHH
Q 015489 202 PDIVASYDYIFIWDEDLGVENFNGEEYIKLVRK 234 (406)
Q Consensus 202 Pdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~ 234 (406)
-.+..|||++.|+|..++.-.++++++.+++
T Consensus 451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp --HHCCSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred --HhcCCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 1257899999999999888888888877654
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=64.07 E-value=4.8 Score=34.48 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=61.5
Q ss_pred CCceEEEEEeccccccchhHHhhcc----ccCcEEEEEEECCCCCccccc--ccc---cceEEEEeeccccccccccccC
Q 015489 131 RPKYLVTFTVGFDLKHNIDAAVKKF----SENFTIMLFHYDGRTSDWEEF--EWS---KRAIHVSARKQTKWWYAKRFLH 201 (406)
Q Consensus 131 ~~k~Lla~~VG~~qk~~vd~~v~kf----~~nF~vmLFhYDG~~~~W~d~--eWs---~~aiHv~a~kqtKWw~akRFLH 201 (406)
.++.-+++++ ++..+.+.++++-. ..+|.|+ +.=||+.|+=.++ ++. .+...+...++++=--.+.=+
T Consensus 4 ~p~vsViIp~-yn~~~~l~~~l~Sl~~q~~~~~eiI-vvDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~- 80 (240)
T 3bcv_A 4 IPKVSVIVPI-YNVEKYLDQCVQALLAQTLSDIEII-LIDDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGL- 80 (240)
T ss_dssp CCSEEEEEEE-SSCTTTHHHHHHHHHTCSSSSEEEE-EEECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHH-
T ss_pred CCcEEEEEec-CCCHHHHHHHHHHHHhCcCCCeEEE-EEECCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHH-
Confidence 3466667776 44445555555544 2577777 4568887652211 111 122222222222110001101
Q ss_pred cccccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCC
Q 015489 202 PDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPG 243 (406)
Q Consensus 202 Pdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPA 243 (406)
-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 81 --~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 81 --DVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp --HHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred --HHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 1246899999999999999999999999998777766544
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=62.98 E-value=2.3 Score=43.00 Aligned_cols=210 Identities=14% Similarity=0.200 Sum_probs=100.0
Q ss_pred CCceEEEEEeccccccchhHHhhccc-----cCcEEEEEEECCCCCccccc--cccc-ceEEEEeeccccccccccccCc
Q 015489 131 RPKYLVTFTVGFDLKHNIDAAVKKFS-----ENFTIMLFHYDGRTSDWEEF--EWSK-RAIHVSARKQTKWWYAKRFLHP 202 (406)
Q Consensus 131 ~~k~Lla~~VG~~qk~~vd~~v~kf~-----~nF~vmLFhYDG~~~~W~d~--eWs~-~aiHv~a~kqtKWw~akRFLHP 202 (406)
.++.-|++++ ++....+..+++... .+|.|+++ -||+.|+=.++ ++.+ ..+++........-.+...-+-
T Consensus 92 ~p~vsviIp~-~n~~~~l~~~l~sl~~q~~~~~~eiivv-Dd~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPT-YNRAKILAITLACLCNQKTIYDYEVIVA-DDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEE-SSCHHHHHHHHHHHHTCCCSSCEEEEEE-EESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEec-CCcHHHHHHHHHHHHhhccCCCeEEEEE-eCCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 4566677776 444455555555442 36787755 47887653221 1111 1233333322111111100000
Q ss_pred ccccCccEEEEecCcccCCCCChHHHHHHHHHhC-CcccCCCccCCC-Cccee------eeeec-CC----cceeeeecc
Q 015489 203 DIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHG-LEISQPGLEPNG-WLTWQ------MTKRR-ND----TEVHTQTEE 269 (406)
Q Consensus 203 diva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~S-~ish~------iT~R~-~~----~~vHr~~~~ 269 (406)
=-.+.+|||++.|+|..++.-.+.++++.+++.. .-+.+|...... ...+. -..+. +. ..+......
T Consensus 170 ~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (625)
T 2z86_A 170 LRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQ 249 (625)
T ss_dssp HHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------------
T ss_pred HHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhcc
Confidence 1135799999999999999999999999988643 344444321111 00000 00000 00 000000000
Q ss_pred --ccCc------cCC---CCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceeh-hhhhchhhhcCCCCeEEEEeeee
Q 015489 270 --REGW------CAE---THEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDAQW 337 (406)
Q Consensus 270 --~~g~------C~~---~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~~~~C~~~~~~kiGVVDa~~ 337 (406)
...| +.+ ....++ .++=..+-+|+|++|+.+=.+ +.....|| =|+-+..-+.....++..++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~rr~~l~~iGgf--de~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 326 (625)
T 2z86_A 250 NKSVDWRIEHFKNTDNLRLCNTPF-RFFSGGNVAFAKKWLFRAGWF--DEEFTHWGGEDNEFGYRLYREGCYFRSVEGAM 326 (625)
T ss_dssp --CCCTHHHHHHHTTTTTTCSCGG-GGCCTTEEEEETHHHHHHCCC--CTTCSSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred CCccccchhhhcccccccccCCce-eEEeeceeeeEHHHHHHhCCC--ccccccCCcchhhhhhhHHhCCceEEEcccch
Confidence 0000 000 001111 122233457899999887433 33344664 55555433333457999999999
Q ss_pred EEeecCCC
Q 015489 338 IVHQGVPS 345 (406)
Q Consensus 338 VvH~g~Pt 345 (406)
+.|...+.
T Consensus 327 v~H~~~~~ 334 (625)
T 2z86_A 327 AYHQEPPG 334 (625)
T ss_dssp EEEECCC-
T ss_pred hhccCCcc
Confidence 99975443
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=60.76 E-value=9.1 Score=40.33 Aligned_cols=132 Identities=10% Similarity=-0.117 Sum_probs=67.4
Q ss_pred CccEEEEecCcccCCCCChHHHHHHHHHh-CCcccCCCcc-CCC-Cccee--eeeecCCcceee--------eeccccC-
Q 015489 207 SYDYIFIWDEDLGVENFNGEEYIKLVRKH-GLEISQPGLE-PNG-WLTWQ--MTKRRNDTEVHT--------QTEEREG- 272 (406)
Q Consensus 207 ~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd-~~S-~ish~--iT~R~~~~~vHr--------~~~~~~g- 272 (406)
.||||++.|+|..++...++++++.++.. ...+..|.+- .+. ..-|. -........... .....+-
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 68999999999999999999999999876 3345554332 111 00000 000000000000 0000000
Q ss_pred ----ccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEee
Q 015489 273 ----WCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQ 341 (406)
Q Consensus 273 ----~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~ 341 (406)
.+...+.+..+.++-..+-+|+|++++.+=.+ . +.. .++=|.-|..-+.....++..+....|.|.
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgf-d-~~F-~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQP-L-PLF-IKWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSC-C-SCS-SSSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCCC-h-hHh-ccCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 00000001111222222347899999887433 2 222 334666554333335678999999999995
No 10
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=48.34 E-value=16 Score=36.40 Aligned_cols=180 Identities=12% Similarity=0.065 Sum_probs=96.4
Q ss_pred eEEEEEeccccccchhHHhhccc-----cCcEEEEEEECCCCCccccc-c---------cccceEEEEee-----cccc-
Q 015489 134 YLVTFTVGFDLKHNIDAAVKKFS-----ENFTIMLFHYDGRTSDWEEF-E---------WSKRAIHVSAR-----KQTK- 192 (406)
Q Consensus 134 ~Lla~~VG~~qk~~vd~~v~kf~-----~nF~vmLFhYDG~~~~W~d~-e---------Ws~~aiHv~a~-----kqtK- 192 (406)
++|++|+ +. +++..+++... .+|.|+ +.=||++|+=.+. + ...+.+....+ +.+|
T Consensus 2 slVIiP~--~e-E~I~~vl~~l~~~~~~~~~EII-VVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF--KH-EHPEVLLHNVRVAAAHPRVHEV-LCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC--CS-SCHHHHHHHHHHHHHSTTCCEE-EEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC--Cc-cCHHHHHHHHHHhccCCCeEEE-EEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 5788886 33 47777777652 467765 6678998863322 1 11233333323 4555
Q ss_pred ---ccccccccCcccccCccEEEEecCccc-CCCCChHHHHHHHHHhCCcccCCCccC---CCCcceeeeeecCCcceee
Q 015489 193 ---WWYAKRFLHPDIVASYDYIFIWDEDLG-VENFNGEEYIKLVRKHGLEISQPGLEP---NGWLTWQMTKRRNDTEVHT 265 (406)
Q Consensus 193 ---Ww~akRFLHPdiva~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~gLeISQPALd~---~S~ish~iT~R~~~~~vHr 265 (406)
+..++..+ -.+.+|||.+.|-|+. .+...+.++++.+++ |.++..+.... ++.+.+.+ .|. .++
T Consensus 78 ~Al~~G~~~Al---~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~-~~~---ll~- 148 (397)
T 2bo4_A 78 DGMNTALRYFL---EETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMI-TRT---GFA- 148 (397)
T ss_dssp HHHHHHHHHHH---HHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHT-HHH---HHH-
T ss_pred HHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHH-HHH---HHH-
Confidence 22221100 1367999999999996 788889999987743 56655543211 01110000 000 000
Q ss_pred eeccccCccCCCCCCCCcceEEEeeccccHHHHHHHhhh-hcCCCcceehhhhhchhhhcCCCCeEEEEe
Q 015489 266 QTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYM-IQNDLVHGWGLDFALRKCVEPAHEKIGVVD 334 (406)
Q Consensus 266 ~~~~~~g~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~m-iqNDLvhGWGLDf~~~~C~~~~~~kiGVVD 334 (406)
..+. --.|...+.| -+||. +|+|++++.+... +.. ..+|||.|..+...+.....+|.-|.
T Consensus 149 ~~~~-~~~~~~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 149 LLWP-HTELSWIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp HHCT-TSSGGGCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHH-HhhccccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 0000 0122222333 23454 5899999866321 001 45799999887766544556777665
No 11
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=37.10 E-value=45 Score=32.42 Aligned_cols=100 Identities=8% Similarity=0.122 Sum_probs=60.8
Q ss_pred CceEEEEEeccccccchhHHhhccc--cCcEEEEEEECCC----CC-cccccccccceEEEEeeccccccccccccCccc
Q 015489 132 PKYLVTFTVGFDLKHNIDAAVKKFS--ENFTIMLFHYDGR----TS-DWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDI 204 (406)
Q Consensus 132 ~k~Lla~~VG~~qk~~vd~~v~kf~--~nF~vmLFhYDG~----~~-~W~d~eWs~~aiHv~a~kqtKWw~akRFLHPdi 204 (406)
.++-++|-+ ++......++|+..+ ..=+=+++..-.. .+ .|..+ +..++.|....+.+=-.-.||+- .-
T Consensus 28 ~~FTvvi~t-y~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~--~~~~vpv~v~~~~~nsLnnRF~p-~~ 103 (293)
T 1omz_A 28 DSFTLIMQT-YNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSL--GPHPIPVIFKPQTANKMRNRLQV-FP 103 (293)
T ss_dssp TCEEEEEEE-SSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHT--CCCSSCEEEEECSSCCGGGGGSC-CT
T ss_pred CceEEEEEe-ecccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhcccc--CCCCccEEEEeCCCCchhhccCC-Cc
Confidence 456555544 445566667777664 3444444444332 11 13322 22244555565655456789974 33
Q ss_pred ccCccEEEEecCcccCCCCChHHHHHHHHHh
Q 015489 205 VASYDYIFIWDEDLGVENFNGEEYIKLVRKH 235 (406)
Q Consensus 205 va~YDYIflwDDDL~vd~f~i~ry~~Ivr~~ 235 (406)
.-.-|+||..|||+.++.-+++.=|++-+++
T Consensus 104 ~i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 104 EVETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp TCCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred cCCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 3458999999999999999998888887654
No 12
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=35.00 E-value=12 Score=24.55 Aligned_cols=15 Identities=40% Similarity=0.786 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHhhhe
Q 015489 18 LMITTFVGVAVGFFL 32 (406)
Q Consensus 18 ~~~~~~~~~~~gf~~ 32 (406)
+++++++|+.+|+|+
T Consensus 5 l~iavvlGa~~Gyf~ 19 (26)
T 2ls4_A 5 LCIAVAAGAGTGYFL 19 (26)
Confidence 578888888888886
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=27.44 E-value=38 Score=30.23 Aligned_cols=29 Identities=10% Similarity=0.268 Sum_probs=26.4
Q ss_pred cCccEEEEecCcccCCCCChHHHHHHHHH
Q 015489 206 ASYDYIFIWDEDLGVENFNGEEYIKLVRK 234 (406)
Q Consensus 206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~ 234 (406)
+..|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 46899999999999998889999999887
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=26.08 E-value=14 Score=38.50 Aligned_cols=32 Identities=13% Similarity=0.193 Sum_probs=0.0
Q ss_pred cCccEEEEecCcccCCCCChHHHHHHHHHhCC
Q 015489 206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGL 237 (406)
Q Consensus 206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gL 237 (406)
+..|||++.|+|-.++...++++++.++..++
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~ 113 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDG 113 (729)
T ss_dssp --------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCE
Confidence 47899999999999988888888888774333
No 15
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=25.90 E-value=24 Score=33.00 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=24.0
Q ss_pred cCccEEEEecCc---ccCCCCChHHHHHHHHHhCCccc
Q 015489 206 ASYDYIFIWDED---LGVENFNGEEYIKLVRKHGLEIS 240 (406)
Q Consensus 206 a~YDYIflwDDD---L~vd~f~i~ry~~Ivr~~gLeIS 240 (406)
..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 369999999999 888777777777 4455543
No 16
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=25.11 E-value=38 Score=25.66 Aligned_cols=14 Identities=14% Similarity=0.484 Sum_probs=10.4
Q ss_pred EEEEEECCCCCccc
Q 015489 161 IMLFHYDGRTSDWE 174 (406)
Q Consensus 161 vmLFhYDG~~~~W~ 174 (406)
.+|+||||--+.|+
T Consensus 42 ~~~VhfdGw~~~~D 55 (69)
T 3sd4_A 42 KVLIHFKRWNHRYD 55 (69)
T ss_dssp EEEEEETTSCGGGC
T ss_pred EEEEEeCCCCCCCC
Confidence 46899999665555
No 17
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=20.78 E-value=50 Score=26.57 Aligned_cols=14 Identities=21% Similarity=0.603 Sum_probs=10.8
Q ss_pred EEEEEECCCCCccc
Q 015489 161 IMLFHYDGRTSDWE 174 (406)
Q Consensus 161 vmLFhYDG~~~~W~ 174 (406)
-+|+||||--+.|+
T Consensus 49 ~v~VHfdGW~~~yD 62 (88)
T 2eqm_A 49 KMLVHFERWSHRYD 62 (88)
T ss_dssp EEEEEESSSTTTEE
T ss_pred EEEEEECCCCCccc
Confidence 57899999666665
Done!