Query 015490
Match_columns 406
No_of_seqs 723 out of 3836
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 13:32:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 100.0 1.5E-44 5.2E-49 329.7 34.4 319 1-375 1-344 (365)
2 1vyh_C Platelet-activating fac 100.0 2.1E-42 7.1E-47 320.7 39.1 276 68-373 119-410 (410)
3 3ow8_A WD repeat-containing pr 100.0 6.7E-42 2.3E-46 306.7 38.5 272 68-373 47-320 (321)
4 4g56_B MGC81050 protein; prote 100.0 1.7E-42 5.9E-47 315.2 34.6 290 68-377 53-346 (357)
5 4gqb_B Methylosome protein 50; 100.0 1.1E-41 3.8E-46 307.7 38.7 256 105-377 74-334 (344)
6 2ynn_A Coatomer subunit beta'; 100.0 6.7E-42 2.3E-46 304.5 33.4 257 104-381 4-266 (304)
7 1got_B GT-beta; complex (GTP-b 100.0 1.9E-40 6.5E-45 300.0 39.2 271 68-371 66-340 (340)
8 1vyh_C Platelet-activating fac 100.0 1.1E-40 3.7E-45 309.2 33.5 255 105-381 100-376 (410)
9 2ynn_A Coatomer subunit beta'; 100.0 1.2E-39 4E-44 290.1 38.4 274 68-375 24-303 (304)
10 3ow8_A WD repeat-containing pr 100.0 1.8E-40 6.2E-45 297.4 33.0 256 105-380 24-285 (321)
11 2pbi_B Guanine nucleotide-bind 100.0 3.2E-39 1.1E-43 293.4 41.0 275 68-371 75-354 (354)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-39 1.5E-43 291.5 36.3 285 68-382 27-343 (345)
13 3frx_A Guanine nucleotide-bind 100.0 6.7E-39 2.3E-43 287.1 37.0 261 104-375 8-318 (319)
14 3iz6_a 40S ribosomal protein R 100.0 1.5E-39 5.1E-44 298.6 32.2 282 68-377 77-378 (380)
15 4gqb_B Methylosome protein 50; 100.0 1.3E-39 4.3E-44 294.2 29.8 257 111-377 28-292 (344)
16 4ery_A WD repeat-containing pr 100.0 4.7E-38 1.6E-42 280.8 39.3 271 68-373 34-311 (312)
17 1got_B GT-beta; complex (GTP-b 100.0 1.8E-38 6.1E-43 287.0 35.0 254 104-379 46-306 (340)
18 1erj_A Transcriptional repress 100.0 8.1E-38 2.8E-42 288.4 38.7 241 114-376 124-391 (393)
19 2hes_X YDR267CP; beta-propelle 100.0 6.2E-38 2.1E-42 282.2 35.1 257 106-375 49-329 (330)
20 1nr0_A Actin interacting prote 100.0 8.3E-38 2.8E-42 304.5 38.4 275 67-377 28-358 (611)
21 4aow_A Guanine nucleotide-bind 100.0 1.7E-37 5.8E-42 280.2 37.6 261 104-377 29-340 (340)
22 1erj_A Transcriptional repress 100.0 6.5E-38 2.2E-42 289.0 34.9 260 109-379 60-346 (393)
23 2pm7_B Protein transport prote 100.0 1.2E-37 4E-42 276.2 32.2 256 107-375 3-286 (297)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-37 7.8E-42 280.3 34.7 256 104-376 6-285 (345)
25 2pbi_B Guanine nucleotide-bind 100.0 2.6E-37 8.9E-42 280.8 34.0 257 104-379 55-320 (354)
26 1sq9_A Antiviral protein SKI8; 100.0 2.6E-37 9.1E-42 285.2 33.8 272 89-376 38-397 (397)
27 1nr0_A Actin interacting prote 100.0 1.9E-36 6.7E-41 294.8 41.5 277 67-376 69-399 (611)
28 2ymu_A WD-40 repeat protein; u 100.0 1.7E-36 5.7E-41 293.7 38.1 263 67-371 313-577 (577)
29 2xzm_R RACK1; ribosome, transl 100.0 5.4E-36 1.8E-40 271.1 38.8 265 104-379 12-290 (343)
30 4g56_B MGC81050 protein; prote 100.0 1.1E-37 3.6E-42 283.6 27.6 256 108-378 37-305 (357)
31 4ery_A WD repeat-containing pr 100.0 1.7E-36 5.7E-41 270.8 34.5 255 104-380 14-274 (312)
32 1gxr_A ESG1, transducin-like e 100.0 8.2E-36 2.8E-40 268.6 39.3 271 68-373 62-336 (337)
33 2xzm_R RACK1; ribosome, transl 100.0 1.9E-36 6.5E-41 274.1 35.1 276 68-376 38-342 (343)
34 2hes_X YDR267CP; beta-propelle 100.0 1.8E-36 6.3E-41 272.6 34.1 250 104-375 5-281 (330)
35 3zwl_B Eukaryotic translation 100.0 3.6E-36 1.2E-40 274.3 36.4 279 68-383 43-355 (369)
36 1k8k_C P40, ARP2/3 complex 41 100.0 1.9E-36 6.7E-41 276.7 33.6 279 68-377 19-364 (372)
37 3bg1_A Protein SEC13 homolog; 100.0 2.5E-37 8.7E-42 276.5 26.4 254 108-374 8-293 (316)
38 3iz6_a 40S ribosomal protein R 100.0 1.3E-37 4.5E-42 285.7 24.5 256 104-378 57-333 (380)
39 1gxr_A ESG1, transducin-like e 100.0 5E-35 1.7E-39 263.5 39.3 254 107-378 45-300 (337)
40 3f3f_A Nucleoporin SEH1; struc 100.0 3.8E-36 1.3E-40 271.6 32.1 259 106-381 4-344 (351)
41 3k26_A Polycomb protein EED; W 100.0 2E-36 6.9E-41 275.8 30.0 240 112-374 68-366 (366)
42 2pm9_A Protein WEB1, protein t 100.0 1.4E-36 4.9E-41 282.0 28.7 253 111-379 65-342 (416)
43 2ymu_A WD-40 repeat protein; u 100.0 2.6E-35 8.9E-40 285.3 38.6 269 67-377 272-541 (577)
44 4gga_A P55CDC, cell division c 100.0 7.3E-35 2.5E-39 271.1 40.0 266 90-378 126-399 (420)
45 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-34 4.3E-39 258.2 38.0 274 68-382 28-304 (313)
46 1r5m_A SIR4-interacting protei 100.0 9.6E-35 3.3E-39 270.0 37.9 238 112-373 107-424 (425)
47 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-36 9.1E-41 286.0 27.4 276 87-375 183-518 (524)
48 3i2n_A WD repeat-containing pr 100.0 1.2E-35 4.2E-40 269.8 30.6 247 109-377 61-356 (357)
49 3jrp_A Fusion protein of prote 100.0 1.6E-35 5.6E-40 271.1 31.1 253 105-375 3-288 (379)
50 4aez_A CDC20, WD repeat-contai 100.0 9.8E-35 3.4E-39 268.6 36.1 263 90-380 114-386 (401)
51 3dm0_A Maltose-binding peripla 100.0 7.8E-35 2.7E-39 287.9 37.6 248 104-374 421-693 (694)
52 2pm9_A Protein WEB1, protein t 100.0 1.8E-36 6.2E-41 281.3 23.6 288 68-375 78-415 (416)
53 3dm0_A Maltose-binding peripla 100.0 2.7E-35 9.2E-40 291.3 33.2 260 105-380 374-638 (694)
54 3ei3_B DNA damage-binding prot 100.0 5.1E-35 1.8E-39 268.7 31.7 270 70-374 87-382 (383)
55 3dwl_C Actin-related protein 2 100.0 3E-36 1E-40 276.3 22.9 274 68-372 22-377 (377)
56 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-34 7E-39 263.3 32.1 246 109-374 4-274 (372)
57 4e54_B DNA damage-binding prot 100.0 2E-35 6.8E-40 276.1 24.9 266 91-377 144-433 (435)
58 3zwl_B Eukaryotic translation 100.0 6.2E-34 2.1E-38 259.5 33.3 252 105-379 24-309 (369)
59 3dwl_C Actin-related protein 2 100.0 9.5E-36 3.3E-40 273.0 21.1 245 108-373 6-280 (377)
60 2xyi_A Probable histone-bindin 100.0 6.3E-34 2.1E-38 265.5 33.2 259 106-375 121-411 (430)
61 4ggc_A P55CDC, cell division c 100.0 1E-32 3.4E-37 246.5 39.2 264 90-376 46-317 (318)
62 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-34 6.5E-39 290.4 30.9 254 104-379 4-264 (814)
63 1sq9_A Antiviral protein SKI8; 100.0 9.3E-35 3.2E-39 268.1 26.3 260 105-382 8-330 (397)
64 4a11_B DNA excision repair pro 100.0 1.6E-33 5.4E-38 260.5 34.2 271 104-382 34-373 (408)
65 3gre_A Serine/threonine-protei 100.0 5.1E-34 1.7E-38 266.8 31.1 254 111-371 109-437 (437)
66 1r5m_A SIR4-interacting protei 100.0 1E-33 3.4E-38 263.1 32.9 260 107-376 39-363 (425)
67 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-33 4.2E-38 284.5 35.8 275 68-377 24-305 (814)
68 3vl1_A 26S proteasome regulato 100.0 1.1E-34 3.7E-39 269.8 25.8 242 115-377 58-325 (420)
69 3gre_A Serine/threonine-protei 100.0 8.9E-35 3.1E-39 271.9 24.7 263 104-381 53-366 (437)
70 3vl1_A 26S proteasome regulato 100.0 4.1E-34 1.4E-38 265.9 28.6 277 64-375 104-420 (420)
71 3i2n_A WD repeat-containing pr 100.0 7.4E-34 2.5E-38 258.0 28.5 252 107-377 12-294 (357)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 5.9E-34 2E-38 263.5 27.8 271 91-376 59-344 (402)
73 3ei3_B DNA damage-binding prot 100.0 9.3E-34 3.2E-38 260.4 28.6 255 104-381 64-346 (383)
74 3mmy_A MRNA export factor; mRN 100.0 2.2E-33 7.4E-38 255.8 29.8 258 102-375 28-347 (368)
75 3dw8_B Serine/threonine-protei 100.0 7.9E-33 2.7E-37 259.3 32.7 289 68-373 39-445 (447)
76 1yfq_A Cell cycle arrest prote 100.0 1.1E-33 3.6E-38 255.6 25.9 250 109-381 7-289 (342)
77 3dw8_B Serine/threonine-protei 100.0 8.7E-34 3E-38 265.8 25.6 256 111-377 26-376 (447)
78 3k26_A Polycomb protein EED; W 100.0 9.5E-34 3.3E-38 258.1 24.6 254 108-378 13-322 (366)
79 3v7d_B Cell division control p 100.0 5.1E-32 1.7E-36 255.2 35.7 257 91-380 144-427 (464)
80 3jro_A Fusion protein of prote 100.0 8.7E-34 3E-38 282.3 24.8 250 107-376 3-287 (753)
81 2j04_B YDR362CP, TAU91; beta p 100.0 5E-34 1.7E-38 270.4 22.0 252 105-375 126-429 (524)
82 1yfq_A Cell cycle arrest prote 100.0 1.6E-32 5.4E-37 247.9 30.6 261 68-366 22-315 (342)
83 1pgu_A Actin interacting prote 100.0 7E-32 2.4E-36 262.9 37.4 283 68-378 29-332 (615)
84 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-32 6E-37 288.1 35.2 272 68-375 626-914 (1249)
85 4e54_B DNA damage-binding prot 100.0 1.6E-33 5.6E-38 263.2 23.6 256 105-379 111-392 (435)
86 3odt_A Protein DOA1; ubiquitin 100.0 3.8E-32 1.3E-36 242.1 31.3 246 104-380 9-261 (313)
87 3vu4_A KMHSV2; beta-propeller 100.0 6.4E-32 2.2E-36 245.4 31.7 244 104-376 10-273 (355)
88 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-32 5.2E-37 288.5 30.5 291 67-381 850-1165(1249)
89 1pgu_A Actin interacting prote 100.0 2.4E-32 8.2E-37 266.2 29.8 252 111-381 16-290 (615)
90 3v7d_B Cell division control p 100.0 1.6E-31 5.4E-36 251.8 34.1 244 105-377 113-384 (464)
91 3frx_A Guanine nucleotide-bind 100.0 4.4E-32 1.5E-36 242.8 28.7 209 163-380 12-233 (319)
92 2w18_A PALB2, fancn, partner a 100.0 1.5E-31 5.1E-36 233.4 29.8 266 90-373 64-356 (356)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-30 4.6E-35 244.5 36.6 247 110-375 99-392 (450)
94 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-31 6.3E-36 249.3 30.4 264 68-379 142-419 (435)
95 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-31 6.1E-36 246.8 28.7 248 114-377 35-302 (402)
96 2pm7_B Protein transport prote 100.0 2.2E-31 7.5E-36 235.8 27.5 202 166-375 8-239 (297)
97 4aez_A CDC20, WD repeat-contai 100.0 4.5E-31 1.5E-35 244.0 30.3 245 108-377 86-339 (401)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.8E-31 2.3E-35 246.5 31.0 252 114-375 5-342 (450)
99 1l0q_A Surface layer protein; 100.0 1.4E-29 4.6E-34 233.2 38.3 261 90-380 13-281 (391)
100 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-31 1.4E-35 266.8 30.5 191 180-377 365-667 (902)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.3E-30 2.2E-34 239.6 35.7 267 68-381 128-398 (445)
102 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-30 7.2E-35 261.7 33.4 244 108-373 12-311 (902)
103 4gq1_A NUP37; propeller, trans 100.0 1.9E-31 6.4E-36 245.7 23.1 246 112-374 88-389 (393)
104 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-29 5.6E-34 236.8 36.7 250 91-375 181-443 (445)
105 2j04_A TAU60, YPL007P, hypothe 100.0 4.7E-31 1.6E-35 244.8 23.6 245 109-373 11-296 (588)
106 1p22_A F-BOX/WD-repeat protein 100.0 8.6E-30 3E-34 238.0 31.8 237 106-376 126-367 (435)
107 3lrv_A PRE-mRNA-splicing facto 100.0 6.8E-31 2.3E-35 237.6 21.4 233 120-377 43-295 (343)
108 3bws_A Protein LP49; two-domai 100.0 8E-29 2.8E-33 231.1 35.6 259 91-374 146-432 (433)
109 4aow_A Guanine nucleotide-bind 100.0 7.5E-29 2.6E-33 223.5 32.6 247 69-333 51-339 (340)
110 3f3f_A Nucleoporin SEH1; struc 100.0 6.7E-29 2.3E-33 224.0 31.9 253 68-338 22-344 (351)
111 3bg1_A Protein SEC13 homolog; 100.0 8.2E-31 2.8E-35 234.3 18.0 204 166-375 12-248 (316)
112 3jrp_A Fusion protein of prote 100.0 3.2E-29 1.1E-33 229.2 27.8 203 166-376 10-242 (379)
113 4a11_B DNA excision repair pro 100.0 8.7E-29 3E-33 228.6 30.5 241 111-375 97-406 (408)
114 4gga_A P55CDC, cell division c 100.0 6.3E-29 2.2E-33 231.0 28.8 244 115-381 107-360 (420)
115 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-29 8.2E-34 227.4 24.8 259 90-374 59-333 (343)
116 2j04_A TAU60, YPL007P, hypothe 100.0 8.8E-29 3E-33 229.6 27.8 222 111-362 83-349 (588)
117 2xyi_A Probable histone-bindin 100.0 4.6E-29 1.6E-33 232.6 26.2 208 161-375 122-354 (430)
118 4h5i_A Guanine nucleotide-exch 100.0 8.6E-29 2.9E-33 225.5 26.4 224 86-331 103-343 (365)
119 3vu4_A KMHSV2; beta-propeller 100.0 7.7E-28 2.6E-32 218.5 31.2 236 114-378 59-340 (355)
120 3bws_A Protein LP49; two-domai 100.0 2.7E-27 9.3E-32 220.8 34.0 274 89-381 101-397 (433)
121 4ggc_A P55CDC, cell division c 100.0 2E-27 6.7E-32 212.1 29.2 244 116-381 28-280 (318)
122 3mmy_A MRNA export factor; mRN 100.0 8.3E-28 2.9E-32 218.8 24.7 207 166-381 38-311 (368)
123 1l0q_A Surface layer protein; 100.0 2.9E-26 9.8E-31 210.9 32.8 211 160-381 24-240 (391)
124 3jro_A Fusion protein of prote 100.0 1.7E-27 5.9E-32 236.9 25.6 203 166-376 8-240 (753)
125 4gq1_A NUP37; propeller, trans 100.0 1.3E-27 4.5E-32 220.0 21.3 201 172-379 94-353 (393)
126 2w18_A PALB2, fancn, partner a 99.9 1E-26 3.4E-31 203.1 20.1 207 112-329 110-355 (356)
127 1nir_A Nitrite reductase; hemo 99.9 5E-25 1.7E-29 210.3 30.3 263 90-378 160-462 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.2E-25 2.1E-29 203.4 29.3 259 89-375 93-388 (415)
129 1ri6_A Putative isomerase YBHE 99.9 2.6E-24 8.9E-29 193.9 31.8 246 110-373 34-307 (343)
130 1pby_B Quinohemoprotein amine 99.9 3.1E-24 1.1E-28 192.9 30.7 269 90-382 12-318 (337)
131 3u4y_A Uncharacterized protein 99.9 8.3E-24 2.8E-28 189.9 31.6 262 90-376 21-306 (331)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.7E-23 9.1E-28 192.5 35.1 241 89-356 159-410 (415)
133 1nir_A Nitrite reductase; hemo 99.9 1E-23 3.6E-28 201.2 32.3 297 63-382 184-522 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.9 7.5E-24 2.6E-28 211.0 32.0 240 115-374 110-413 (741)
135 3hfq_A Uncharacterized protein 99.9 5.8E-23 2E-27 185.7 34.7 267 87-373 16-316 (347)
136 2ojh_A Uncharacterized protein 99.9 7.3E-25 2.5E-29 193.0 21.6 249 90-365 23-293 (297)
137 3vgz_A Uncharacterized protein 99.9 1.9E-22 6.5E-27 182.5 36.7 280 66-364 49-334 (353)
138 3vgz_A Uncharacterized protein 99.9 1.9E-22 6.4E-27 182.6 30.9 248 112-381 39-310 (353)
139 2z3z_A Dipeptidyl aminopeptida 99.9 4.9E-23 1.7E-27 204.0 29.1 272 90-376 102-437 (706)
140 1xfd_A DIP, dipeptidyl aminope 99.9 4.4E-23 1.5E-27 204.9 25.6 267 90-375 38-394 (723)
141 1k32_A Tricorn protease; prote 99.9 1.4E-22 4.7E-27 208.9 29.9 195 169-376 246-463 (1045)
142 3scy_A Hypothetical bacterial 99.9 3.4E-21 1.2E-25 175.1 35.5 265 86-373 26-336 (361)
143 2ecf_A Dipeptidyl peptidase IV 99.9 5.9E-23 2E-27 204.6 23.9 254 113-373 36-366 (741)
144 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-21 5E-26 176.3 29.3 272 90-382 22-333 (349)
145 1k32_A Tricorn protease; prote 99.9 6.6E-22 2.3E-26 203.9 29.1 264 89-374 226-502 (1045)
146 3u4y_A Uncharacterized protein 99.9 1.6E-21 5.4E-26 175.0 27.3 236 119-377 3-255 (331)
147 2ojh_A Uncharacterized protein 99.9 9.9E-22 3.4E-26 172.8 24.2 222 133-377 19-261 (297)
148 1ri6_A Putative isomerase YBHE 99.9 1.9E-20 6.4E-25 168.5 33.0 261 66-355 46-334 (343)
149 2z3z_A Dipeptidyl aminopeptida 99.9 5.4E-22 1.8E-26 196.6 24.4 243 114-376 82-393 (706)
150 1jof_A Carboxy-CIS,CIS-muconat 99.9 7.9E-21 2.7E-25 173.0 28.3 270 88-375 15-342 (365)
151 1xfd_A DIP, dipeptidyl aminope 99.9 9.5E-23 3.2E-27 202.5 16.4 238 115-371 18-341 (723)
152 3o4h_A Acylamino-acid-releasin 99.9 1.6E-21 5.3E-26 188.9 22.3 234 113-372 21-274 (582)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 6.2E-22 2.1E-26 184.0 17.1 201 168-376 37-280 (434)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-20 6.1E-25 174.1 24.5 211 113-332 36-279 (434)
155 3o4h_A Acylamino-acid-releasin 99.9 4E-20 1.4E-24 179.0 24.2 257 68-373 32-314 (582)
156 1z68_A Fibroblast activation p 99.9 1.3E-21 4.3E-26 194.3 12.5 238 117-376 19-348 (719)
157 3pe7_A Oligogalacturonate lyas 99.9 5.6E-19 1.9E-23 161.9 27.7 284 63-375 41-383 (388)
158 3hfq_A Uncharacterized protein 99.8 3E-18 1E-22 154.7 31.1 225 105-336 77-324 (347)
159 3scy_A Hypothetical bacterial 99.8 7.9E-18 2.7E-22 152.8 34.0 271 66-352 58-360 (361)
160 1pby_B Quinohemoprotein amine 99.8 9.2E-20 3.1E-24 163.6 20.1 199 169-380 35-275 (337)
161 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-19 5.1E-24 179.8 20.5 250 114-376 17-355 (740)
162 1z68_A Fibroblast activation p 99.8 1.9E-19 6.5E-24 178.6 20.7 261 90-374 37-391 (719)
163 3pe7_A Oligogalacturonate lyas 99.8 7E-19 2.4E-23 161.3 20.4 255 104-376 21-331 (388)
164 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-17 5.3E-22 148.9 28.5 248 113-377 23-325 (329)
165 1q7f_A NHL, brain tumor CG1071 99.8 1.4E-16 5E-21 139.6 32.5 248 111-378 27-284 (286)
166 3azo_A Aminopeptidase; POP fam 99.8 1E-17 3.5E-22 164.6 27.8 252 105-376 59-371 (662)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.9E-17 6.5E-22 150.6 26.9 203 168-376 40-294 (365)
168 3c5m_A Oligogalacturonate lyas 99.8 8.4E-19 2.9E-23 161.1 16.7 239 116-377 38-332 (396)
169 4a5s_A Dipeptidyl peptidase 4 99.8 4.4E-17 1.5E-21 162.0 29.2 261 90-372 37-396 (740)
170 2gop_A Trilobed protease; beta 99.8 1.4E-16 4.7E-21 143.7 29.5 242 89-373 43-330 (347)
171 2oiz_A Aromatic amine dehydrog 99.8 9.2E-17 3.2E-21 145.6 27.6 285 67-380 13-342 (361)
172 3c5m_A Oligogalacturonate lyas 99.8 8.4E-17 2.9E-21 147.7 27.0 289 63-373 41-381 (396)
173 2xdw_A Prolyl endopeptidase; a 99.8 6E-17 2E-21 160.3 25.2 247 112-376 123-416 (710)
174 1jmx_B Amine dehydrogenase; ox 99.8 1.8E-17 6.1E-22 149.4 19.7 238 118-380 4-290 (349)
175 3azo_A Aminopeptidase; POP fam 99.8 2.3E-17 8E-22 162.1 20.7 246 107-373 17-322 (662)
176 3e5z_A Putative gluconolactona 99.7 3.8E-15 1.3E-19 131.2 28.7 243 105-375 19-287 (296)
177 2mad_H Methylamine dehydrogena 99.7 7.7E-14 2.6E-18 126.5 36.0 285 67-380 30-356 (373)
178 1rwi_B Serine/threonine-protei 99.7 4.2E-15 1.4E-19 128.9 26.6 244 115-378 25-268 (270)
179 2gop_A Trilobed protease; beta 99.7 1.6E-15 5.5E-20 136.7 24.7 223 114-376 15-293 (347)
180 3dsm_A Uncharacterized protein 99.7 8.3E-15 2.9E-19 131.0 26.9 267 90-381 18-308 (328)
181 2bkl_A Prolyl endopeptidase; m 99.7 1.5E-15 5.3E-20 149.8 23.6 247 111-376 118-399 (695)
182 2dg1_A DRP35, lactonase; beta 99.7 8.6E-14 2.9E-18 124.6 32.7 249 105-374 36-314 (333)
183 2oiz_A Aromatic amine dehydrog 99.7 4.4E-14 1.5E-18 127.9 30.5 269 63-356 55-360 (361)
184 1qks_A Cytochrome CD1 nitrite 99.7 1.5E-13 5.1E-18 131.0 34.6 260 90-375 178-478 (567)
185 2xdw_A Prolyl endopeptidase; a 99.7 7.3E-15 2.5E-19 145.4 26.0 244 123-377 81-371 (710)
186 2dg1_A DRP35, lactonase; beta 99.7 1E-14 3.6E-19 130.6 24.7 240 114-377 6-265 (333)
187 1yr2_A Prolyl oligopeptidase; 99.7 9.1E-15 3.1E-19 145.3 26.4 246 112-376 161-443 (741)
188 3sjl_D Methylamine dehydrogena 99.7 2.4E-14 8.1E-19 128.4 25.1 291 65-382 40-371 (386)
189 3no2_A Uncharacterized protein 99.7 6.7E-14 2.3E-18 121.6 27.2 214 125-362 5-231 (276)
190 3fvz_A Peptidyl-glycine alpha- 99.7 1.6E-14 5.5E-19 129.2 23.1 206 168-380 24-283 (329)
191 1q7f_A NHL, brain tumor CG1071 99.7 8.2E-14 2.8E-18 121.9 25.8 199 168-377 30-240 (286)
192 1qks_A Cytochrome CD1 nitrite 99.7 2.6E-13 8.8E-18 129.3 31.1 230 126-374 167-421 (567)
193 2z2n_A Virginiamycin B lyase; 99.7 5.9E-13 2E-17 117.0 31.4 240 111-372 12-253 (299)
194 2z2n_A Virginiamycin B lyase; 99.7 5.5E-12 1.9E-16 110.7 37.5 241 112-376 55-297 (299)
195 3c75_H MADH, methylamine dehyd 99.6 1.3E-13 4.5E-18 125.8 26.4 289 66-381 81-409 (426)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.1E-13 1.7E-17 118.4 29.6 247 109-375 13-300 (314)
197 3no2_A Uncharacterized protein 99.6 4.4E-14 1.5E-18 122.8 21.8 191 178-380 4-201 (276)
198 2bkl_A Prolyl endopeptidase; m 99.6 5.6E-14 1.9E-18 138.7 25.1 238 122-373 76-348 (695)
199 3e5z_A Putative gluconolactona 99.6 8.9E-14 3.1E-18 122.4 21.9 200 167-378 27-249 (296)
200 2ece_A 462AA long hypothetical 99.6 3E-12 1E-16 115.6 31.2 291 66-362 22-399 (462)
201 3hrp_A Uncharacterized protein 99.6 1.7E-12 5.8E-17 119.3 30.3 237 114-373 131-409 (409)
202 3g4e_A Regucalcin; six bladed 99.6 2.5E-12 8.5E-17 113.2 29.5 228 112-362 11-260 (297)
203 3dsm_A Uncharacterized protein 99.6 2.2E-12 7.4E-17 115.2 28.0 198 169-377 45-256 (328)
204 1yr2_A Prolyl oligopeptidase; 99.6 1.1E-12 3.6E-17 130.5 26.4 240 122-373 115-392 (741)
205 3iuj_A Prolyl endopeptidase; h 99.6 5.1E-13 1.7E-17 131.6 23.5 245 111-376 126-407 (693)
206 2qc5_A Streptogramin B lactona 99.6 7.4E-11 2.5E-15 103.5 35.2 239 111-373 59-299 (300)
207 2qc5_A Streptogramin B lactona 99.6 2.3E-11 8E-16 106.7 31.2 239 112-372 18-258 (300)
208 2ghs_A AGR_C_1268P; regucalcin 99.5 2.4E-11 8.3E-16 108.3 30.3 223 115-363 50-291 (326)
209 1rwi_B Serine/threonine-protei 99.5 2.3E-12 7.8E-17 111.5 22.2 199 169-376 25-224 (270)
210 3dr2_A Exported gluconolactona 99.5 1.2E-11 4E-16 109.3 26.4 236 105-365 36-298 (305)
211 2mad_H Methylamine dehydrogena 99.5 7.5E-11 2.6E-15 106.8 28.9 237 121-382 28-315 (373)
212 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.9E-17 117.3 17.1 181 115-318 39-231 (388)
213 1xip_A Nucleoporin NUP159; bet 99.5 9.9E-13 3.4E-17 118.4 15.9 174 169-362 39-232 (388)
214 1mda_H Methylamine dehydrogena 99.5 5.5E-12 1.9E-16 113.2 19.7 224 137-382 47-354 (368)
215 2qe8_A Uncharacterized protein 99.4 1.1E-10 3.8E-15 104.8 25.9 242 114-367 17-314 (343)
216 3sjl_D Methylamine dehydrogena 99.4 5.1E-11 1.7E-15 106.8 21.0 240 119-382 38-328 (386)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.4E-10 4.7E-15 102.6 23.6 202 168-379 18-261 (314)
218 3g4e_A Regucalcin; six bladed 99.4 2.7E-10 9.1E-15 100.1 25.0 203 169-381 14-236 (297)
219 3c75_H MADH, methylamine dehyd 99.4 3E-11 1E-15 110.2 19.0 237 123-382 82-367 (426)
220 3iuj_A Prolyl endopeptidase; h 99.4 2.2E-11 7.6E-16 119.9 18.7 200 168-375 129-360 (693)
221 3hrp_A Uncharacterized protein 99.4 1.6E-10 5.6E-15 106.1 22.5 198 168-376 131-356 (409)
222 1fwx_A Nitrous oxide reductase 99.3 5.6E-11 1.9E-15 111.0 17.0 232 124-376 100-433 (595)
223 2ghs_A AGR_C_1268P; regucalcin 99.3 2.3E-09 7.7E-14 95.5 26.0 195 170-377 51-262 (326)
224 3dr2_A Exported gluconolactona 99.3 3.4E-09 1.2E-13 93.4 27.0 211 90-328 68-303 (305)
225 2qe8_A Uncharacterized protein 99.3 1.8E-10 6E-15 103.5 18.8 202 168-376 17-280 (343)
226 2iwa_A Glutamine cyclotransfer 99.3 3.6E-09 1.2E-13 89.9 24.9 206 159-376 10-239 (266)
227 2hz6_A Endoplasmic reticulum t 99.3 7.9E-13 2.7E-17 120.0 2.1 185 178-378 8-196 (369)
228 1mda_H Methylamine dehydrogena 99.3 2.6E-09 8.9E-14 95.9 24.7 244 90-353 47-366 (368)
229 1kb0_A Quinohemoprotein alcoho 99.3 2E-09 6.8E-14 105.3 25.5 245 124-382 127-515 (677)
230 1yiq_A Quinohemoprotein alcoho 99.2 6.5E-09 2.2E-13 101.8 27.4 243 125-381 121-512 (689)
231 1npe_A Nidogen, entactin; glyc 99.2 8.2E-08 2.8E-12 82.7 31.1 223 114-356 36-263 (267)
232 1kb0_A Quinohemoprotein alcoho 99.2 1.8E-08 6.1E-13 98.5 28.0 236 135-374 189-567 (677)
233 1npe_A Nidogen, entactin; glyc 99.2 5.7E-08 1.9E-12 83.7 27.2 206 168-381 36-245 (267)
234 2hz6_A Endoplasmic reticulum t 99.2 1.1E-11 3.6E-16 112.5 3.3 187 124-339 8-200 (369)
235 2ece_A 462AA long hypothetical 99.1 3.7E-08 1.3E-12 89.1 25.6 230 67-319 93-399 (462)
236 1yiq_A Quinohemoprotein alcoho 99.1 2E-08 6.7E-13 98.4 25.6 185 172-360 239-534 (689)
237 3nol_A Glutamine cyclotransfer 99.1 5E-08 1.7E-12 81.8 23.1 191 160-363 33-244 (262)
238 2iwa_A Glutamine cyclotransfer 99.1 7.4E-08 2.5E-12 81.8 24.2 197 116-332 23-238 (266)
239 1fwx_A Nitrous oxide reductase 99.1 3.5E-08 1.2E-12 92.4 22.1 233 67-333 99-433 (595)
240 2p4o_A Hypothetical protein; p 99.0 8.4E-07 2.9E-11 78.0 30.2 227 114-364 32-278 (306)
241 3nok_A Glutaminyl cyclase; bet 99.0 8.5E-08 2.9E-12 80.4 22.0 188 159-362 44-253 (268)
242 3q7m_A Lipoprotein YFGL, BAMB; 99.0 3.5E-07 1.2E-11 82.9 28.1 227 124-380 102-343 (376)
243 3mbr_X Glutamine cyclotransfer 99.0 9.9E-07 3.4E-11 73.4 26.1 191 159-362 10-222 (243)
244 3qqz_A Putative uncharacterize 99.0 1.3E-06 4.4E-11 73.8 26.6 203 109-329 22-251 (255)
245 2fp8_A Strictosidine synthase; 99.0 8.1E-07 2.8E-11 78.7 26.9 249 114-376 19-315 (322)
246 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.9E-06 9.9E-11 76.8 29.8 221 126-371 144-375 (376)
247 1kv9_A Type II quinohemoprotei 98.9 1.1E-06 3.6E-11 86.0 28.4 242 125-381 117-495 (668)
248 3hxj_A Pyrrolo-quinoline quino 98.9 2.1E-08 7E-13 89.2 14.9 227 114-377 60-286 (330)
249 3hxj_A Pyrrolo-quinoline quino 98.9 2E-07 6.9E-12 82.7 21.0 188 170-376 139-326 (330)
250 3nol_A Glutamine cyclotransfer 98.9 5.2E-07 1.8E-11 75.7 21.4 192 105-320 33-244 (262)
251 3v64_C Agrin; beta propeller, 98.9 3.8E-06 1.3E-10 75.2 27.9 243 113-378 33-279 (349)
252 1kv9_A Type II quinohemoprotei 98.9 4.1E-06 1.4E-10 81.8 29.8 224 135-362 177-520 (668)
253 3v65_B Low-density lipoprotein 98.8 3.2E-06 1.1E-10 76.8 26.8 207 166-379 114-323 (386)
254 3tc9_A Hypothetical hydrolase; 98.8 5.1E-06 1.7E-10 76.6 27.5 238 115-373 138-429 (430)
255 2xe4_A Oligopeptidase B; hydro 98.8 3.8E-07 1.3E-11 90.4 21.3 196 115-329 175-398 (751)
256 2xe4_A Oligopeptidase B; hydro 98.8 2.3E-07 7.9E-12 92.0 19.6 195 169-372 175-396 (751)
257 2ad6_A Methanol dehydrogenase 98.8 4.7E-07 1.6E-11 86.7 20.9 241 125-381 115-501 (571)
258 1w6s_A Methanol dehydrogenase 98.8 2.1E-06 7.3E-11 82.2 25.1 247 119-381 111-510 (599)
259 2p4o_A Hypothetical protein; p 98.8 2.4E-06 8.1E-11 75.1 23.5 201 161-373 25-241 (306)
260 1ijq_A LDL receptor, low-densi 98.8 1.4E-05 4.8E-10 70.5 28.4 205 167-379 29-243 (316)
261 3v64_C Agrin; beta propeller, 98.7 4.6E-05 1.6E-09 68.1 29.6 209 112-338 71-282 (349)
262 4hw6_A Hypothetical protein, I 98.7 1.2E-05 4E-10 74.2 26.3 241 114-373 139-432 (433)
263 3nok_A Glutaminyl cyclase; bet 98.7 5.5E-07 1.9E-11 75.5 15.5 160 211-383 56-219 (268)
264 3v65_B Low-density lipoprotein 98.7 2.7E-05 9.2E-10 70.7 28.0 211 111-339 113-326 (386)
265 2fp8_A Strictosidine synthase; 98.7 8.6E-06 2.9E-10 72.0 24.3 186 169-363 20-248 (322)
266 3mbr_X Glutamine cyclotransfer 98.7 2.6E-06 8.8E-11 70.9 18.8 161 211-383 22-188 (243)
267 1flg_A Protein (quinoprotein e 98.7 2.6E-05 9E-10 74.7 28.6 245 125-381 117-523 (582)
268 1k3i_A Galactose oxidase precu 98.7 1.1E-05 3.6E-10 78.9 25.4 258 89-363 219-530 (656)
269 2ad6_A Methanol dehydrogenase 98.6 5E-05 1.7E-09 72.6 28.9 184 173-360 240-523 (571)
270 3p5b_L Low density lipoprotein 98.6 5.3E-05 1.8E-09 69.1 27.6 209 166-380 110-326 (400)
271 3amr_A 3-phytase; beta-propell 98.6 1.1E-05 3.9E-10 70.5 21.8 193 180-381 41-271 (355)
272 3qqz_A Putative uncharacterize 98.6 8.2E-05 2.8E-09 62.7 26.2 197 168-371 27-250 (255)
273 3sov_A LRP-6, low-density lipo 98.6 4.1E-05 1.4E-09 67.4 24.7 205 168-379 35-243 (318)
274 4a2l_A BT_4663, two-component 98.6 0.00028 9.7E-09 70.5 33.9 245 113-375 214-481 (795)
275 3p5b_L Low density lipoprotein 98.6 0.00045 1.5E-08 62.9 32.5 230 90-339 93-328 (400)
276 3kya_A Putative phosphatase; s 98.6 7.9E-05 2.7E-09 69.0 26.5 248 115-378 140-479 (496)
277 1ijq_A LDL receptor, low-densi 98.5 0.00038 1.3E-08 61.2 31.1 211 112-339 28-246 (316)
278 3sov_A LRP-6, low-density lipo 98.5 0.00036 1.2E-08 61.3 29.2 209 114-339 35-246 (318)
279 1w6s_A Methanol dehydrogenase 98.5 0.00047 1.6E-08 66.0 31.0 183 172-358 245-530 (599)
280 1flg_A Protein (quinoprotein e 98.5 0.00028 9.6E-09 67.5 29.4 184 172-359 250-544 (582)
281 4a2l_A BT_4663, two-component 98.5 0.00033 1.1E-08 70.0 31.0 240 114-375 310-572 (795)
282 1k3i_A Galactose oxidase precu 98.5 4.2E-05 1.4E-09 74.7 23.8 246 117-376 189-499 (656)
283 3m0c_C LDL receptor, low-densi 98.3 0.00051 1.7E-08 67.9 27.9 207 166-378 422-636 (791)
284 3m0c_C LDL receptor, low-densi 98.3 0.0016 5.5E-08 64.4 29.4 214 109-338 419-639 (791)
285 3v9f_A Two-component system se 98.2 0.0011 3.6E-08 66.2 27.7 246 113-375 312-569 (781)
286 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0033 1.1E-07 60.6 29.4 202 167-377 36-240 (628)
287 3v9f_A Two-component system se 98.2 0.0021 7.2E-08 64.1 29.0 248 113-375 257-525 (781)
288 2p9w_A MAL S 1 allergenic prot 98.2 0.00058 2E-08 59.3 21.0 155 171-332 16-216 (334)
289 4hw6_A Hypothetical protein, I 98.1 0.003 1E-07 58.1 26.7 216 90-330 163-432 (433)
290 1n7d_A LDL receptor, low-densi 98.1 1.7E-05 5.9E-10 77.7 12.2 212 113-339 405-622 (699)
291 3tc9_A Hypothetical hydrolase; 98.1 0.00018 6.1E-09 66.2 17.8 158 211-374 138-301 (430)
292 2ism_A Putative oxidoreductase 98.1 0.0018 6.3E-08 57.7 23.6 234 112-362 29-333 (352)
293 3s94_A LRP-6, low-density lipo 98.1 0.0011 3.6E-08 64.0 23.4 205 167-378 39-247 (619)
294 1n7d_A LDL receptor, low-densi 98.0 6.5E-06 2.2E-10 80.7 7.3 208 168-381 406-621 (699)
295 3amr_A 3-phytase; beta-propell 98.0 0.0039 1.3E-07 54.7 23.0 143 188-339 98-272 (355)
296 2xbg_A YCF48-like protein; pho 98.0 0.0073 2.5E-07 53.2 30.9 233 113-371 79-319 (327)
297 2xzh_A Clathrin heavy chain 1; 98.0 0.0066 2.3E-07 52.3 30.5 239 118-377 71-335 (365)
298 3a9g_A Putative uncharacterize 98.0 0.0066 2.3E-07 54.1 25.1 235 113-362 28-330 (354)
299 2xbg_A YCF48-like protein; pho 98.0 0.0084 2.9E-07 52.8 25.6 239 113-377 35-281 (327)
300 3kya_A Putative phosphatase; s 97.9 0.0023 7.9E-08 59.2 21.2 196 169-371 140-407 (496)
301 1bpo_A Protein (clathrin); cla 97.9 0.012 4.1E-07 52.8 28.4 240 117-377 69-334 (494)
302 3s94_A LRP-6, low-density lipo 97.9 0.016 5.3E-07 55.9 27.6 202 167-375 348-552 (619)
303 4a0p_A LRP6, LRP-6, low-densit 97.9 0.021 7.2E-07 55.1 32.0 203 113-335 36-241 (628)
304 3sre_A PON1, serum paraoxonase 97.8 0.015 5.2E-07 51.4 23.6 185 170-364 52-287 (355)
305 2p9w_A MAL S 1 allergenic prot 97.7 0.0057 1.9E-07 53.1 19.4 160 211-375 14-216 (334)
306 3s25_A Hypothetical 7-bladed b 97.7 0.01 3.5E-07 51.5 20.5 199 121-361 21-240 (302)
307 3sre_A PON1, serum paraoxonase 97.6 0.021 7.2E-07 50.6 21.9 216 108-338 44-307 (355)
308 3ei3_A DNA damage-binding prot 97.6 0.075 2.6E-06 55.0 28.7 174 190-374 808-999 (1158)
309 3ii7_A Kelch-like protein 7; p 97.6 0.014 4.7E-07 50.7 20.2 187 178-375 55-273 (306)
310 2ism_A Putative oxidoreductase 97.5 0.015 5.2E-07 51.7 19.6 196 168-375 31-298 (352)
311 2vpj_A Kelch-like protein 12; 97.5 0.0094 3.2E-07 51.6 17.7 184 178-375 62-279 (301)
312 1cru_A Protein (soluble quinop 97.5 0.067 2.3E-06 49.3 25.4 112 114-229 27-163 (454)
313 2g8s_A Glucose/sorbosone dehyd 97.3 0.092 3.2E-06 46.6 26.2 247 114-373 18-351 (353)
314 3das_A Putative oxidoreductase 97.2 0.091 3.1E-06 46.3 27.2 241 109-362 27-326 (347)
315 1xi4_A Clathrin heavy chain; a 97.2 0.11 3.8E-06 53.8 24.1 240 118-377 70-334 (1630)
316 3a9g_A Putative uncharacterize 97.2 0.082 2.8E-06 46.9 21.0 198 168-375 29-297 (354)
317 2xn4_A Kelch-like protein 2; s 97.2 0.074 2.5E-06 45.9 20.3 147 178-334 108-279 (302)
318 3ii7_A Kelch-like protein 7; p 97.2 0.07 2.4E-06 46.2 19.8 146 178-333 101-274 (306)
319 3pbp_A Nucleoporin NUP82; beta 97.2 0.037 1.2E-06 49.7 17.6 149 120-285 27-208 (452)
320 3pbp_A Nucleoporin NUP82; beta 97.1 0.02 6.7E-07 51.4 15.4 119 115-235 67-207 (452)
321 3das_A Putative oxidoreductase 97.1 0.056 1.9E-06 47.6 18.3 170 205-375 27-234 (347)
322 2xn4_A Kelch-like protein 2; s 97.1 0.041 1.4E-06 47.5 17.4 190 178-376 61-278 (302)
323 2vpj_A Kelch-like protein 12; 97.0 0.06 2.1E-06 46.4 18.0 189 178-376 14-233 (301)
324 4asc_A Kelch repeat and BTB do 97.0 0.11 3.8E-06 45.1 19.8 190 175-375 42-278 (315)
325 1zgk_A Kelch-like ECH-associat 97.0 0.056 1.9E-06 46.9 17.8 186 178-375 70-288 (308)
326 2uvk_A YJHT; unknown function, 97.0 0.026 9E-07 50.1 15.5 56 323-381 286-349 (357)
327 1zgk_A Kelch-like ECH-associat 96.9 0.18 6.1E-06 43.6 20.3 146 178-334 121-290 (308)
328 1tl2_A L10, protein (tachylect 96.8 0.15 5.2E-06 41.3 16.9 150 211-376 42-210 (236)
329 3ei3_A DNA damage-binding prot 96.7 0.68 2.3E-05 48.0 32.3 245 113-378 326-595 (1158)
330 4asc_A Kelch repeat and BTB do 96.7 0.28 9.5E-06 42.5 23.9 224 90-335 14-281 (315)
331 2woz_A Kelch repeat and BTB do 96.6 0.32 1.1E-05 42.2 19.8 192 175-375 53-288 (318)
332 3sbq_A Nitrous-oxide reductase 96.6 0.34 1.2E-05 45.1 19.4 91 281-374 299-408 (638)
333 1cru_A Protein (soluble quinop 96.4 0.32 1.1E-05 44.8 18.7 98 168-265 27-156 (454)
334 2be1_A Serine/threonine-protei 96.3 0.071 2.4E-06 46.8 13.2 107 137-250 21-140 (339)
335 1tl2_A L10, protein (tachylect 96.3 0.054 1.8E-06 44.0 11.0 143 168-324 41-203 (236)
336 2woz_A Kelch repeat and BTB do 96.3 0.5 1.7E-05 41.0 22.1 223 91-336 26-292 (318)
337 2uvk_A YJHT; unknown function, 96.2 0.5 1.7E-05 41.7 18.7 56 281-338 286-349 (357)
338 2g8s_A Glucose/sorbosone dehyd 96.2 0.22 7.6E-06 44.1 16.0 145 211-360 19-214 (353)
339 2be1_A Serine/threonine-protei 96.2 0.021 7.1E-07 50.2 8.9 188 180-377 11-234 (339)
340 3ott_A Two-component system se 96.2 1.1 3.9E-05 44.1 30.4 232 113-375 21-261 (758)
341 3s25_A Hypothetical 7-bladed b 95.4 1.1 3.8E-05 38.5 26.1 246 68-371 24-290 (302)
342 2zwa_A Leucine carboxyl methyl 95.3 1 3.6E-05 43.9 17.9 196 177-376 396-637 (695)
343 2zwa_A Leucine carboxyl methyl 95.1 2.7 9.3E-05 41.0 21.1 160 173-335 446-639 (695)
344 2xzh_A Clathrin heavy chain 1; 94.8 1.8 6.1E-05 37.5 26.8 198 172-378 71-294 (365)
345 1xi4_A Clathrin heavy chain; a 93.8 4.4 0.00015 42.5 18.5 200 172-378 70-293 (1630)
346 3sbq_A Nitrous-oxide reductase 93.3 1.6 5.5E-05 40.7 13.2 128 111-240 320-478 (638)
347 2wg3_C Hedgehog-interacting pr 92.7 2.2 7.4E-05 39.3 13.5 111 210-320 14-158 (463)
348 4hvt_A Ritya.17583.B, post-pro 92.1 9.5 0.00033 37.2 18.9 200 172-376 133-383 (711)
349 1bpo_A Protein (clathrin); cla 91.3 8.2 0.00028 35.0 30.2 223 90-334 87-334 (494)
350 3qhy_B Beta-lactamase inhibito 90.3 7.6 0.00026 32.9 15.2 185 169-376 64-248 (282)
351 3ott_A Two-component system se 90.0 15 0.00053 35.9 28.3 238 114-375 146-402 (758)
352 2wg3_C Hedgehog-interacting pr 89.7 12 0.00041 34.3 25.6 74 301-375 276-372 (463)
353 3q6k_A 43.2 kDa salivary prote 85.7 19 0.00064 32.0 19.3 171 190-362 124-342 (381)
354 2k1a_A Integrin alpha-IIB; sin 84.0 2.2 7.5E-05 24.0 4.2 29 378-406 5-38 (42)
355 4gq2_M Nucleoporin NUP120; bet 82.2 46 0.0016 33.7 23.6 38 302-339 237-274 (950)
356 3zwu_A Alkaline phosphatase PH 77.7 8.9 0.0003 36.3 8.7 59 303-361 478-548 (592)
357 3qhy_B Beta-lactamase inhibito 77.5 31 0.0011 29.0 14.9 187 169-378 25-211 (282)
358 4gq2_M Nucleoporin NUP120; bet 77.4 9.2 0.00031 38.8 9.3 37 211-247 237-273 (950)
359 2knc_A Integrin alpha-IIB; tra 77.2 2.1 7.3E-05 25.6 2.8 28 378-405 7-39 (54)
360 3q6k_A 43.2 kDa salivary prote 76.4 41 0.0014 29.8 18.3 139 232-374 124-306 (381)
361 3b7f_A Glycosyl hydrolase, BNR 76.1 41 0.0014 29.7 22.4 66 169-235 116-203 (394)
362 2l8s_A Integrin alpha-1; trans 74.7 2.1 7.3E-05 25.5 2.3 27 380-406 6-37 (54)
363 3zwu_A Alkaline phosphatase PH 74.6 12 0.00042 35.4 8.7 59 169-227 477-548 (592)
364 4a9v_A PHOX; hydrolase, beta-p 73.5 20 0.00068 33.7 9.6 61 302-362 477-549 (592)
365 3kci_A Probable E3 ubiquitin-p 73.4 49 0.0017 29.3 23.5 185 180-374 63-293 (389)
366 4fhn_B Nucleoporin NUP120; pro 71.3 5.5 0.00019 41.4 6.1 37 345-381 239-275 (1139)
367 4a9v_A PHOX; hydrolase, beta-p 68.5 30 0.001 32.6 9.6 61 168-228 476-549 (592)
368 1suu_A DNA gyrase subunit A; t 59.4 83 0.0028 26.8 22.2 191 177-374 6-231 (312)
369 1zi0_A DNA gyrase subunit A; b 59.1 84 0.0029 26.7 22.8 74 165-239 92-175 (307)
370 4hvt_A Ritya.17583.B, post-pro 51.7 1.8E+02 0.0061 28.3 25.2 152 171-330 243-429 (711)
371 3b7f_A Glycosyl hydrolase, BNR 51.2 1.3E+02 0.0043 26.4 25.0 58 302-361 233-296 (394)
372 1sqj_A OXG-RCBH, oligoxylogluc 50.5 1.9E+02 0.0067 28.4 18.7 150 167-321 14-190 (789)
373 3f7f_A Nucleoporin NUP120; nuc 50.4 31 0.0011 33.4 6.6 36 302-339 223-258 (729)
374 4fhn_B Nucleoporin NUP120; pro 49.8 14 0.00049 38.3 4.6 38 302-339 239-276 (1139)
375 3f7f_A Nucleoporin NUP120; nuc 46.2 29 0.00099 33.6 5.6 36 211-248 223-258 (729)
376 3uc1_A DNA gyrase subunit A; D 43.7 1.6E+02 0.0054 25.3 22.4 158 211-375 96-280 (327)
377 4ftd_A Uncharacterized protein 42.7 1.9E+02 0.0065 26.1 14.3 123 116-240 191-327 (453)
378 3mez_B Mannose-specific lectin 39.9 93 0.0032 21.7 7.4 11 349-359 61-71 (113)
379 4gx7_A Cytolysin and hemolysin 37.5 1.2E+02 0.0042 22.3 6.4 83 300-385 49-139 (152)
380 3no0_A DNA gyrase subunit A; D 37.3 1.8E+02 0.0061 24.2 20.2 187 179-375 35-247 (276)
381 3uc1_A DNA gyrase subunit A; D 36.2 2.1E+02 0.0071 24.6 22.9 158 166-330 93-278 (327)
382 1suu_A DNA gyrase subunit A; t 35.2 2.1E+02 0.0071 24.3 21.9 73 167-240 99-181 (312)
383 1zi0_A DNA gyrase subunit A; b 33.6 2.2E+02 0.0075 24.1 21.6 191 177-374 1-226 (307)
384 3al9_A Plexin-A2; beta-propell 25.9 1.9E+02 0.0063 27.0 7.5 68 302-369 401-476 (539)
385 1q47_A Semaphorin 3A; beta pro 25.5 1.8E+02 0.0062 26.7 7.3 68 302-369 405-487 (495)
386 3no0_A DNA gyrase subunit A; D 24.1 3.1E+02 0.01 22.7 23.4 159 164-330 64-245 (276)
387 1wp5_A Topoisomerase IV; broke 24.0 3.4E+02 0.012 23.2 24.1 72 167-239 91-173 (323)
388 2zux_A YESW protein; beta-prop 22.5 4.9E+02 0.017 24.5 19.8 58 190-248 152-246 (591)
389 4gz8_A Semaphorin-3A; multi-do 22.1 2.7E+02 0.0092 26.8 7.9 56 314-369 431-495 (667)
390 1zvt_A Topoisomerase IV subuni 20.8 3.5E+02 0.012 22.1 13.5 155 220-380 1-169 (256)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-44 Score=329.67 Aligned_cols=319 Identities=20% Similarity=0.260 Sum_probs=241.8
Q ss_pred CCCCCCCCCCccceeeCCeeeeeecccccccccccCCCCCCCCCCchhhhccCCCcccccccccCCCCCcEEEEEcCCCC
Q 015490 1 MGSRSRNEESHNLQKYGVPLYGAGWVPYDQVIRSTHKPPKQQDDDDKEEDQHGSKDEAVADKSDDIRRNYYVVLAGGGGA 80 (406)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~ 80 (406)
||+ +|-+....+.|+|||+++|.| ++.++++||||.
T Consensus 1 m~~---m~~~~~~~~~g~PV~sv~fs~-----------------------------------------dg~~l~sGGg~~ 36 (365)
T 4h5i_A 1 MAS---MKFVTASYNVGYPAYGAKFLN-----------------------------------------NDTLLVAGGGGE 36 (365)
T ss_dssp ------CCCCEEEEECSSCEEEEEEEE-----------------------------------------TTEEEEEEECCS
T ss_pred CCc---ccceeeecCCCCCEEEEEEeC-----------------------------------------CCcEEEEECCCc
Confidence 555 677888899999999999994 555677778888
Q ss_pred CCCCcCccEEEEEEecCCCCccc----cceeEEecCCCCceEEEEccCCCeEEEEe------------cCCeEEEEEecc
Q 015490 81 GNSGIRNAVLLSHFDFASNSLSD----QPVAELRTDSDLPYRMAIHPHGDGIICAL------------QNSCRLFEWDEV 144 (406)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~~~~l~~~~------------~~~~~i~~~~~~ 144 (406)
.++|++|.+.++.++........ .....+.+|.+.|.+++++ +..++++. ++.+++|.++..
T Consensus 37 ~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~ 114 (365)
T 4h5i_A 37 GNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKV 114 (365)
T ss_dssp SSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETT
T ss_pred cccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCC
Confidence 89999999999999876543221 1223577899999998775 45666542 567888887754
Q ss_pred cccceeecceeccceeeecccccCcEEEEEECCCCCEEEE--eeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC
Q 015490 145 ENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAA--GSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK 222 (406)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 222 (406)
....... . .........+...+.+++|||||+++++ ++.|++|+|||+++++.+..+. |+..|.+++|+|||+
T Consensus 115 ~~~~~~~-~---~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~ 189 (365)
T 4h5i_A 115 NDQLEFL-T---SVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGK 189 (365)
T ss_dssp TTEEEEE-E---EECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSS
T ss_pred CceEEEe-e---eeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCc
Confidence 3221110 0 0011111122356899999999998765 4578999999999999887764 667899999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCeeee-ecccCCcceEEEEEEEcCCCCceEEEEEEEcCC--CcEEEEEeCCCceE----EEE
Q 015490 223 FLVSLGNRGPGRVWDLASSAVAT-PLAKENDELFASCRFSPLNNEDYVLYIAAITDR--GASIVTWNTTTWKR----IRT 295 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~i~~~d~~~~~~----~~~ 295 (406)
++++++.+ .+++|+..+++... .....+...+.+++|+|+++. +++++.+. ...+++||+..... ...
T Consensus 190 ~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~----l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 190 VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV----LIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE----EEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE----EEEEecCCcceeEEeecccccceecceeeee
Confidence 99999855 67777777766554 344456677999999999984 22333222 23688899876543 345
Q ss_pred eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 296 KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 296 ~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+..|...|++++|+|||++||+|+.|++|+|||+++++++..+..+|..+|++++|+|||++|+|||.|++|+||++...
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 66788899999999999999999999999999999999998876689999999999999999999999999999999654
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-42 Score=320.74 Aligned_cols=276 Identities=14% Similarity=0.193 Sum_probs=233.9
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
...+++.++..| .+..|+... .+....+.+|.+.|.+++|+|++++|++++ |+.+++|++..
T Consensus 119 ~~~~l~s~s~Dg----------~i~vwd~~~----~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~--- 181 (410)
T 1vyh_C 119 VFSVMVSASEDA----------TIKVWDYET----GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--- 181 (410)
T ss_dssp SSSEEEEEESSS----------CEEEEETTT----CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS---
T ss_pred CCCEEEEEeCCC----------eEEEEECCC----CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---
Confidence 556666654433 345556554 246778999999999999999999999988 99999987642
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
.+.+..+. |...|.+++|+|++++|++|+.|++|++||++++.++..+.+|...|.++.|+|++++|+
T Consensus 182 -----------~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 182 -----------FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp -----------SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred -----------CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE
Confidence 22333343 447899999999999999999999999999999999999999988999999999999999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCce--------------EEEEEEEcCCCcEEEEEeCCCce
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDY--------------VLYIAAITDRGASIVTWNTTTWK 291 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~l~~~~~~~~~~~i~~~d~~~~~ 291 (406)
+++.|+.|++||+++++....+..+ ...+.+++|+|++.... .-.++++++.|+.|++||+++++
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred EEcCCCeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999888887654 55789999999742100 00145677889999999999999
Q ss_pred EEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 292 RIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 292 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
++..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+. +|...|++++|+|++.+|++|+.|++|++|+
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 999999999999999999999999999999999999999999888886 8999999999999999999999999999998
Q ss_pred ec
Q 015490 372 IE 373 (406)
Q Consensus 372 ~~ 373 (406)
++
T Consensus 409 ~r 410 (410)
T 1vyh_C 409 CR 410 (410)
T ss_dssp --
T ss_pred CC
Confidence 64
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.7e-42 Score=306.71 Aligned_cols=272 Identities=15% Similarity=0.148 Sum_probs=231.8
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+...++.++..+ .+.++.++... ......+.+|...|.+++|+|++..+++++ |+.+++|++. ++
T Consensus 47 ~~~~l~tgs~D~--------~v~vW~~~~~~----~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~--~~ 112 (321)
T 3ow8_A 47 NSETVVTGSLDD--------LVKVWKWRDER----LDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE--NG 112 (321)
T ss_dssp --CEEEEEETTS--------CEEEEEEETTE----EEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT--TT
T ss_pred CCCEEEEEcCCC--------CEEEEECCCCC----eeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC--CC
Confidence 345666554332 45666655432 134557899999999999999999999988 8888887654 23
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
+.. ..+. +...+.+++|+|++++|++|+.||.|++|++++++....+..+...|.+++|+|++++|+
T Consensus 113 ~~~------------~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 113 KQI------------KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp EEE------------EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CEE------------EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE
Confidence 222 2222 346788999999999999999999999999999998888888888999999999999999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEE
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSS 305 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~ 305 (406)
+++.|+.|++||+++++.+..+..+ ...+.+++|+|+++ .+++++.|+.|++||+++++....+..|...|.+
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~------~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQ------LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCC-SSCCCEEEECTTSC------EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEEccc-CCceeEEEEcCCCC------EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 9999999999999999998888754 45688999999998 4677789999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 306 FNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 306 ~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
++|+|++++|++++.|++|++||+.+++.+..+. +|...|.+++|+|++++|++++.|++|++||+.
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999986 899999999999999999999999999999963
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-42 Score=315.22 Aligned_cols=290 Identities=15% Similarity=0.171 Sum_probs=229.3
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEeccccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENT 147 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~ 147 (406)
++++++.++... .+ +.+ ..+..|+...............+|...|.+++|+|++.+++++.++.++||++......
T Consensus 53 DG~~las~s~d~-~~--~wd-~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~ 128 (357)
T 4g56_B 53 DGALLLAASSLS-SR--TWG-GSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESL 128 (357)
T ss_dssp SSCEEEEEECSS-SS--SCC-EEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------
T ss_pred CCCEEEEEcCCC-Cc--ccc-CeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeecccccee
Confidence 677777654322 11 111 24566666554444455666778999999999999998776666999999876543211
Q ss_pred ceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEE
Q 015490 148 EIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVS 226 (406)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s 226 (406)
... ......|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|...|++++|++++. ++++
T Consensus 129 ~~~---------~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 129 LVN---------KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp CCC---------CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEE
T ss_pred EEE---------eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeee
Confidence 111 111234568899999999999999999999999999999999999988999999999999875 7899
Q ss_pred EeCCCCEEEEEcCCCeeeeeccc-CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEE
Q 015490 227 LGNRGPGRVWDLASSAVATPLAK-ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSS 305 (406)
Q Consensus 227 ~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~ 305 (406)
++.|+.|++||+++++....+.. .+...+.+++|+|++.. ++++++.|+.|++||+++++.+..+..|...|.+
T Consensus 200 ~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~-----~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD-----TFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT-----EEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc-----eEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 99999999999999887766543 34556889999999876 5667788999999999999999999999999999
Q ss_pred EEEcCCC-CEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcC-CCCeEEEEECCCcEEEEEecCCcC
Q 015490 306 FNVSADG-KLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSY-DSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 306 ~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++|+|++ ++|++|+.|++|+|||+++++.+..+ +|.+.|++++|+| ++++|+|++.||+|++|++.+..+
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 9999987 68999999999999999999887765 6999999999998 799999999999999999976544
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=307.70 Aligned_cols=256 Identities=17% Similarity=0.175 Sum_probs=210.3
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA 183 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 183 (406)
.......|...|.+++|+|++. +++++ |+.++||+++.... .... ......|.+.|++++|+|+|++|+
T Consensus 74 ~~~~~~~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~--~~~~-------~~~~~~H~~~V~~v~~spdg~~l~ 143 (344)
T 4gqb_B 74 FCSAGVQTEAGVADLTWVGERG-ILVASDSGAVELWELDENET--LIVS-------KFCKYEHDDIVSTVSVLSSGTQAV 143 (344)
T ss_dssp GCSEEEEESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSS--CEEE-------EEEEECCSSCEEEEEECTTSSEEE
T ss_pred eeeeeeccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCc--eeEe-------eccccCCCCCEEEEEECCCCCEEE
Confidence 3344556788899999999965 55555 89999988764321 1111 011123568899999999999999
Q ss_pred EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEEEeCCCCEEEEEcCCCeeeeeccc-CCcceEEEEEEE
Q 015490 184 AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVSLGNRGPGRVWDLASSAVATPLAK-ENDELFASCRFS 261 (406)
Q Consensus 184 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~ 261 (406)
+|+.|++|++||+++++.+..+.+|...|++++|++++. +|++++.|++|++||+++++....+.. .+...+.+++|+
T Consensus 144 sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec
Confidence 999999999999999999999999999999999999885 789999999999999999998887754 334468899999
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCceEEEEeec
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADG-KLLAVGTASGDISIIDSSSLQVRTAVKK 340 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 340 (406)
|++.. ++++++.|+.|++||+++++++..+..|...|.+++|+|++ ++|++|+.|++|+|||+.+++... + .
T Consensus 224 p~~~~-----~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~-~ 296 (344)
T 4gqb_B 224 PQQSE-----VFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S-Q 296 (344)
T ss_dssp SSCTT-----EEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E-C
T ss_pred CCCCc-----ceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E-c
Confidence 98876 56777889999999999999999999999999999999998 589999999999999999887664 4 3
Q ss_pred ccccceEEEEEcCCCCe-EEEEECCCcEEEEEecCCcC
Q 015490 341 AHLGIVTALAFSYDSRA-LVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 341 ~~~~~v~~~~~sp~~~~-l~s~s~dg~i~iw~~~~~~~ 377 (406)
+|.+.|++++|+|+++. |++++.|++|++|++.+...
T Consensus 297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 89999999999999864 67899999999999987543
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.7e-42 Score=304.54 Aligned_cols=257 Identities=14% Similarity=0.198 Sum_probs=220.9
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
+...++.+|.+.|.+++|+|++++|++++ |+.+++|++.. +. .+..+. +...|.+++|+|++++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--~~------------~~~~~~~~~~~v~~~~~~~~~~~ 69 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET--QV------------EVRSIQVTETPVRAGKFIARKNW 69 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TE------------EEEEEECCSSCEEEEEEEGGGTE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--Cc------------eeEEeeccCCcEEEEEEeCCCCE
Confidence 46678999999999999999999999998 88888876542 22 223333 4478999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee-eecccCCcceEEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA-TPLAKENDELFASCRF 260 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~ 260 (406)
|++|+.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|++|++||++++... ..+. .+...+.+++|
T Consensus 70 l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~h~~~v~~v~~ 148 (304)
T 2ynn_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAF 148 (304)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-CCCSCEEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-ccCCcEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999887544 4444 45667999999
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-ecCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCceEEEE
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-VVREPVSSFNVSA--DGKLLAVGTASGDISIIDSSSLQVRTA 337 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 337 (406)
+|.+.. .+++++.|+.|++||+++......+. .+...+..++|+| ++++|++|+.|+.|++||+++++.+..
T Consensus 149 ~p~~~~-----~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 149 NPKDPS-----TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp CTTCTT-----EEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCCCC-----EEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee
Confidence 996544 56778899999999998877655554 4457889999987 778999999999999999999999999
Q ss_pred eecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 338 VKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 338 ~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
+. +|...|.+++|+|++++|++|+.||+|++||+++++.+..+
T Consensus 224 ~~-~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 224 LE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eC-CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 86 89999999999999999999999999999999988765443
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-40 Score=299.96 Aligned_cols=271 Identities=18% Similarity=0.236 Sum_probs=228.8
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
++++++.++..| .+..|+... ...+..+..|...|.+++|+|+++++++++ ++.+++|++.....
T Consensus 66 d~~~l~s~s~Dg----------~v~iWd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 66 DSRLLLSASQDG----------KLIIWDSYT----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp TSSEEEEEETTT----------EEEEEETTT----CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CCCEEEEEeCCC----------cEEEEECCC----CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 666777664433 466666554 346778899999999999999999999988 88888887654321
Q ss_pred cceeecceeccceeeecc-cccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 147 TEIRRLGVKISEKVLSQL-ENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
. ......+ .|.+.|.++.|++++. +++++.|++|++||+++++....+.+|...|.+++|+|++++|+
T Consensus 132 ~----------~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 132 N----------VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp S----------CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred c----------ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 1 1122223 3457899999998875 88999999999999999999988988989999999999999999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC--CCe
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR--EPV 303 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~i 303 (406)
+++.|+.|++||+++++....+..+ ...+.+++|+|+++ .+++++.|+.|++||+++++.+..+..+. ..|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~------~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGH-ESDINAICFFPNGN------AFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCC-SSCEEEEEECTTSS------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCC-cCCEEEEEEcCCCC------EEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 9999999999999999988888754 45689999999998 35677889999999999988877765332 479
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 304 SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
.+++|+|+|++|++|+.|+.|++||+.+++....+. +|...|.+++|+|+|++|++|+.|++|++||
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee-cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999988886 8999999999999999999999999999996
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-40 Score=309.20 Aligned_cols=255 Identities=16% Similarity=0.265 Sum_probs=228.2
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIF 182 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l 182 (406)
....+.+|.+.|++++|+|++.++++++ |+.++||++.. + +....+. |...|.+++|+|++++|
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~--~------------~~~~~l~~h~~~V~~v~~~~~~~~l 165 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--G------------DFERTLKGHTDSVQDISFDHSGKLL 165 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT--C------------CCCEEECCCSSCEEEEEECTTSSEE
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--C------------cEEEEEeccCCcEEEEEEcCCCCEE
Confidence 3567899999999999999999999998 89999987653 2 2223333 44789999999999999
Q ss_pred EEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEc
Q 015490 183 AAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSP 262 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (406)
++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.++..+..+ ...+.++.|+|
T Consensus 166 ~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~ 244 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQ 244 (410)
T ss_dssp EEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECT
T ss_pred EEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-CccEEEEEECC
Confidence 99999999999999999999999899899999999999999999999999999999999998888754 45688999999
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCC--------------------CCEEEEEeCCC
Q 015490 263 LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSAD--------------------GKLLAVGTASG 322 (406)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~--------------------~~~l~~~~~dg 322 (406)
++. ++++++.|+.|++||+++++....+..|...|.+++|+|+ +.+|++|+.|+
T Consensus 245 ~g~------~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 245 DGT------LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp TSS------EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred CCC------EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 998 4567788999999999999999999999999999999996 67999999999
Q ss_pred cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 323 DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 323 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.|++||+++++.+..+. +|...|.+++|+|+|++|++|+.|++|++||+.+++.+..+
T Consensus 319 ~i~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 319 TIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp EEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred eEEEEECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 99999999999999886 89999999999999999999999999999999988765443
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-39 Score=290.07 Aligned_cols=274 Identities=15% Similarity=0.184 Sum_probs=225.0
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
++++++.++..| .+..|+... ...+..+..|...|.+++|+|++++|++++ |+.+++|++. ++
T Consensus 24 ~~~~l~s~~~dg----------~v~lWd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~--~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYSG----------RVELWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN--TG 87 (304)
T ss_dssp SSSEEEEEETTS----------EEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT--TC
T ss_pred CCCEEEEEcCCC----------cEEEEECCC----CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC--CC
Confidence 667777665433 455666654 346788999999999999999999999998 8888887654 22
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-eEeeeeccCCceeEEEEcc-CCCE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE-IILNESEAHASVKDLSFSP-DGKF 223 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~s~-~~~~ 223 (406)
+ .+..+. |...|.+++|+|++++|++|+.|++|++||++++. ....+.+|...|.+++|+| ++..
T Consensus 88 ~------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 88 E------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp C------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred c------------EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 2 223333 45889999999999999999999999999998774 4455677788999999999 6789
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCe
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPV 303 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i 303 (406)
|++++.|++|++||++++.....+..++...+..+.|+|.... -.+++++.|+.|++||+++++++..+.+|...|
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK----PYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTC----CEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCC----CEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE
Confidence 9999999999999999887777666666667888999874332 145677889999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCC--eEEEEECCCcEEEEEecCC
Q 015490 304 SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSR--ALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~s~s~dg~i~iw~~~~~ 375 (406)
.+++|+|++++|++|+.||+|++||+.+++....+. .|...+.+++|+|++. ++++|+.| .+.+|++.+.
T Consensus 232 ~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc-CCCccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 999999999999999999999999999999999986 7889999999999875 47776655 5788888653
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=297.38 Aligned_cols=256 Identities=19% Similarity=0.257 Sum_probs=223.6
Q ss_pred ceeEEecCCCCceEEEEccC----CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC
Q 015490 105 PVAELRTDSDLPYRMAIHPH----GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE 178 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~----~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~ 178 (406)
....+.+|.+.|.+++|+|+ +.+|++|+ |+.++||+++.... .....+. |...|.+++|+++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~------------~~~~~l~gh~~~v~~~~~~~~ 91 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL------------DLQWSLEGHQLGVVSVDISHT 91 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE------------EEEEEECCCSSCEEEEEECSS
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe------------eeeeeeccCCCCEEEEEECCC
Confidence 34556789999999999985 56888888 99999999875321 1122233 4478999999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEE
Q 015490 179 GTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASC 258 (406)
Q Consensus 179 g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (406)
+.++++++.|++|++||+.+++.+..+..+...+.+++|+|++++|++++.|+.+++||+++++....+..+ ...+.++
T Consensus 92 ~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-~~~v~~~ 170 (321)
T 3ow8_A 92 LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-GKFILSI 170 (321)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-SSCEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-CceEEEE
Confidence 999999999999999999999999888888889999999999999999999999999999999888777654 4568899
Q ss_pred EEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEe
Q 015490 259 RFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAV 338 (406)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 338 (406)
+|+|+++. +++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++|+.|+.|++||+++++....+
T Consensus 171 ~~spdg~~------lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 171 AYSPDGKY------LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp EECTTSSE------EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EECCCCCE------EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 99999983 566788999999999999999999999999999999999999999999999999999999988888
Q ss_pred ecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 339 KKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 339 ~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
. +|...|.+++|+|++++|++++.|++|++||+++++.+..
T Consensus 245 ~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 245 S-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp C-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred c-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 5 8999999999999999999999999999999998876543
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.2e-39 Score=293.38 Aligned_cols=275 Identities=20% Similarity=0.221 Sum_probs=228.9
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++.++.++..| .+..|+... ......+..|...|.+++|+|++..+++++ |+.+++|.+.....
T Consensus 75 d~~~l~s~s~Dg----------~v~vWd~~~----~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 75 DKRRIVSSSQDG----------KVIVWDSFT----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp TSSEEEEEETTS----------EEEEEETTT----CCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CCCEEEEEeCCC----------eEEEEECCC----CCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 566666654433 456666544 245677888999999999999999999998 88889988764322
Q ss_pred cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEcc--CCCEE
Q 015490 147 TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSP--DGKFL 224 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l 224 (406)
.... ........|...|.+++|+|++..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|
T Consensus 141 ~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 141 ENMA-------AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCSG-------GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred cccc-------ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 1110 00111123558899999999999999999999999999999999999999988999999987 57899
Q ss_pred EEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC--CC
Q 015490 225 VSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR--EP 302 (406)
Q Consensus 225 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~ 302 (406)
++++.|+.|++||+++++++..+..+ ...+.+++|+|++. .+++++.|+.|++||+++.+.+..+..+. ..
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~------~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETH-ESDVNSVRYYPSGD------AFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSS------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CCCeEEEEEeCCCC------EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 99999999999999999988888754 45689999999987 35677889999999999988777665442 46
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 303 VSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 303 i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
+.+++|+|++++|++|+.|+.|++||+.+++.+..+. +|...|.+++|+|+|++|++|+.|++|++|+
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~-~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF-GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE-CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8999999999999999999999999999999888885 8999999999999999999999999999995
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=291.53 Aligned_cols=285 Identities=14% Similarity=0.163 Sum_probs=215.0
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
++++++.++..+ .+.++..... .+. .......+|...|.+++|+|++++|++++ |+.++||+.+....
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~--~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGD--SWI-CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETT--EEE-EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCC--cce-eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe
Confidence 566666664433 3455544432 110 01122368999999999999999999998 99999998764321
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc---eEeeeeccCCceeEEEEccCCC
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE---IILNESEAHASVKDLSFSPDGK 222 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~i~~~~~s~~~~ 222 (406)
..+..+. |...|.+++|+|++++|++|+.|++|++||++++. .+..+..|...|.+++|+|+++
T Consensus 96 ------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 96 ------------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp ------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred ------------EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 2233333 45789999999999999999999999999997764 3455667778999999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCee--eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-----------
Q 015490 223 FLVSLGNRGPGRVWDLASSAV--ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT----------- 289 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~----------- 289 (406)
+|++++.|+.|++||.++++. ...+.. +...+.+++|+|+++ .+++++.|+.|++||...
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~------~l~s~s~D~~v~iW~~~~~~~~~~~~~~~ 236 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQ------RLASCSDDRTVRIWRQYLPGNEQGVACSG 236 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSS------EEEEEETTSCEEEEEEECTTCTTCCCCC-
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCC------EEEEEeCCCeEEEeccccCCCCccceeec
Confidence 999999999999999988753 345554 456799999999998 356778899999999632
Q ss_pred ----ceEEEEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce--------EEEEeecccccceEEEEEcCCC-
Q 015490 290 ----WKRIRTKQV-VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ--------VRTAVKKAHLGIVTALAFSYDS- 355 (406)
Q Consensus 290 ----~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~~~v~~~~~sp~~- 355 (406)
.+++..+.. |...|.+++|+|++..|++++.|+.|++|+..... .......+|...|++++|+|++
T Consensus 237 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 316 (345)
T 3fm0_A 237 SDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP 316 (345)
T ss_dssp --CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST
T ss_pred cCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc
Confidence 233444444 67889999999999999999999999999986542 1222224799999999999997
Q ss_pred CeEEEEECCCcEEEEEecCCcCCCCch
Q 015490 356 RALVSASMDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 356 ~~l~s~s~dg~i~iw~~~~~~~~~~~~ 382 (406)
.+|++|+.||+|++|++.++++....+
T Consensus 317 ~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 317 GLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp TEEEEEETTSCEEEEEECC--------
T ss_pred eEEEEcCCCCcEEEEEecCCCCccccc
Confidence 589999999999999999988765543
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.7e-39 Score=287.13 Aligned_cols=261 Identities=14% Similarity=0.169 Sum_probs=211.7
Q ss_pred cceeEEecCCCCceEEEEccCC-CeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCC
Q 015490 104 QPVAELRTDSDLPYRMAIHPHG-DGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGT 180 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~-~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~ 180 (406)
....++.+|.+.|.+++|+|++ .+|++++ |+.+++|++...... ....+..+. |...|.+++|+|+++
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~---------~~~~~~~~~~h~~~v~~~~~s~dg~ 78 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK---------FGVPVRSFKGHSHIVQDCTLTADGA 78 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE---------EEEEEEEEECCSSCEEEEEECTTSS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc---------ccccceEEeCCcccEEEEEECCCCC
Confidence 3556789999999999999976 6788887 899999887643211 112233444 447899999999999
Q ss_pred EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEE
Q 015490 181 IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRF 260 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (406)
+|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||++. +....+..+ ...+.++.|
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h-~~~v~~~~~ 156 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGH-NDWVSQVRV 156 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCC-SSCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEecc-CCcEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999964 555555544 556889999
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee-
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK- 339 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 339 (406)
+|......--..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 9864310000145667889999999999999999999999999999999999999999999999999998877655442
Q ss_pred ----------------------------------------------cccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 340 ----------------------------------------------KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 340 ----------------------------------------------~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
..|...+.+++|+|||++|++|+.||.|++||+.
T Consensus 237 ~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 237 QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 0123456788888899899999999999999887
Q ss_pred CC
Q 015490 374 DK 375 (406)
Q Consensus 374 ~~ 375 (406)
++
T Consensus 317 t~ 318 (319)
T 3frx_A 317 TA 318 (319)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-39 Score=298.62 Aligned_cols=282 Identities=19% Similarity=0.271 Sum_probs=228.2
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
++++++.++..+ .+..|+... .+....+..|...|.+++|+|++++|++++ |+.+++|++.....
T Consensus 77 ~~~~l~s~s~D~----------~v~iWd~~~----~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 77 EKNWIVSASQDG----------RLIVWNALT----SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp TSSCEEEEETTS----------EEEEEETTT----TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred CCCEEEEEeCCC----------eEEEEECCC----CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 566666654433 566666654 346788999999999999999999999988 99999998764321
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcceEeee-----eccCCceeEEEEcc
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEG-TIFAAGSENGNLRVFKWPSLEIILNE-----SEAHASVKDLSFSP 219 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~~~~~i~~~~~s~ 219 (406)
... .......+. |.+.+.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++
T Consensus 143 ~~~-------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 143 RDG-------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCC-------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ccC-------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 100 111122233 44778999999974 67999999999999999999887665 45667899999987
Q ss_pred -CCCEEEEEeCCCCEEEEEcCC-CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee
Q 015490 220 -DGKFLVSLGNRGPGRVWDLAS-SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ 297 (406)
Q Consensus 220 -~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~ 297 (406)
++++|++++.|++|++||++. ++....+.. +...+.+++|+|++. .+++++.|+.|++||+++++.+..+.
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~------~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHG-HEGDINSVKFFPDGQ------RFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECC-CSSCCCEEEECTTSS------EEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECC-cCCCeEEEEEecCCC------eEEEEcCCCeEEEEECCCCcEEEEec
Confidence 889999999999999999984 455566654 455688999999998 36778899999999999999888776
Q ss_pred ecC-------CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee---cccccceEEEEEcCCCCeEEEEECCCcE
Q 015490 298 VVR-------EPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK---KAHLGIVTALAFSYDSRALVSASMDSSV 367 (406)
Q Consensus 298 ~~~-------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~s~s~dg~i 367 (406)
.+. ..+.+++|+|+|++|++|+.||.|++||+.+++....+. .+|.+.|.+++|+|+|++|++|+.|++|
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 543 248899999999999999999999999999888777662 3799999999999999999999999999
Q ss_pred EEEEecCCcC
Q 015490 368 RVTVIEDKKK 377 (406)
Q Consensus 368 ~iw~~~~~~~ 377 (406)
++|++...++
T Consensus 369 ~iW~~~~~~~ 378 (380)
T 3iz6_a 369 KIWAFSGHRK 378 (380)
T ss_dssp EEEECCSSSS
T ss_pred EEEecCCCcc
Confidence 9999988765
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=294.24 Aligned_cols=257 Identities=18% Similarity=0.145 Sum_probs=207.0
Q ss_pred cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCe
Q 015490 111 TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGN 190 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 190 (406)
.|...|.+++|+|||++|+++++.++++|+.......... .............+...|.+++|+|++ .|++|+.||+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPC--AAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGG--GTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeecccc--ccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 4677899999999999999888888888753221100000 000011222334456789999999985 6789999999
Q ss_pred EEEEeCCCcceEee----eeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCC
Q 015490 191 LRVFKWPSLEIILN----ESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNE 266 (406)
Q Consensus 191 i~vwd~~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (406)
|+|||+++++.... ..+|...|++++|+|++++|++++.|++|++||+++++.+..+..| ...|.+++|++++..
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECSSCTT
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEecCCCCC
Confidence 99999998875433 3467789999999999999999999999999999999999988765 456899999999986
Q ss_pred ceEEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCceEEEEeecccc
Q 015490 267 DYVLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSFNVSA-DGKLLAVGTASGDISIIDSSSLQVRTAVKKAHL 343 (406)
Q Consensus 267 ~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 343 (406)
++++++.|+.|++||+++++....+.. +...+.+++|+| ++++|++|+.||.|++||+++++.+..+. +|.
T Consensus 184 -----~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~ 257 (344)
T 4gqb_B 184 -----VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHS 257 (344)
T ss_dssp -----EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCS
T ss_pred -----ceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCC
Confidence 566778899999999999988877643 446789999999 46789999999999999999999999886 899
Q ss_pred cceEEEEEcCCC-CeEEEEECCCcEEEEEecCCcC
Q 015490 344 GIVTALAFSYDS-RALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 344 ~~v~~~~~sp~~-~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
..|++++|+|++ ++|++|+.|++|+|||+++++.
T Consensus 258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 999999999998 5799999999999999988764
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.7e-38 Score=280.83 Aligned_cols=271 Identities=14% Similarity=0.229 Sum_probs=226.4
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++..| .+..|+... .+....+.+|...|.+++|+|++++|++++ ++.+++|++.. +
T Consensus 34 ~~~~l~s~~~dg----------~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~--~ 97 (312)
T 4ery_A 34 NGEWLASSSADK----------LIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS--G 97 (312)
T ss_dssp TSSEEEEEETTS----------CEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--C
T ss_pred CCCEEEEeeCCC----------eEEEEeCCC----cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC--C
Confidence 666777664433 244455543 246678899999999999999999999987 88888876542 2
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
+ .+..+. +...|.+++|+|++++|++|+.|+.|++||+++++....+..|...|.+++|+|++++|+
T Consensus 98 ~------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 98 K------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp C------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred c------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 2 222333 457899999999999999999999999999999999888888888999999999999999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCe--
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPV-- 303 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i-- 303 (406)
+++.|+.|++||+++++....+...+...+..++|+|+++. +++++.|+.|++||+++++.+..+..|....
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 239 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY------ILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 239 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE------EEEEETTTEEEEEETTTTEEEEEECSSCCSSSC
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE------EEEEcCCCeEEEEECCCCcEEEEEEecCCceEE
Confidence 99999999999999998888776666777899999999983 4556789999999999999999888776432
Q ss_pred -EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEE--CCCcEEEEEec
Q 015490 304 -SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS--MDSSVRVTVIE 373 (406)
Q Consensus 304 -~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s--~dg~i~iw~~~ 373 (406)
......+++++|++|+.||.|++||+.+++.+..+. +|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh-ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 223334688999999999999999999999998886 8999999999999999999987 69999999964
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-38 Score=287.00 Aligned_cols=254 Identities=13% Similarity=0.167 Sum_probs=217.6
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
....++.+|.+.|.+++|+|++++|++++ |+.++||+.. ++... ..+. +...|.+++|+|++++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~--~~~~~------------~~~~~~~~~v~~~~~s~~~~~ 111 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY--TTNKV------------HAIPLRSSWVMTCAYAPSGNY 111 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT--TCCEE------------EEEECSSSCEEEEEECTTSSE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC--CCCcc------------eEeecCCccEEEEEECCCCCE
Confidence 46678999999999999999999999998 8888887643 22222 2222 4477999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcc----eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEE
Q 015490 182 FAAGSENGNLRVFKWPSLE----IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFAS 257 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 257 (406)
|++|+.|+.|++|++.+.+ ....+.+|...|.++.|++++. +++++.|++|++||+++++....+..+ ...+.+
T Consensus 112 l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~ 189 (340)
T 1got_B 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGH-TGDVMS 189 (340)
T ss_dssp EEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCC-SSCEEE
T ss_pred EEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCC-CCceEE
Confidence 9999999999999997653 4456677888999999998875 889999999999999999998888765 456889
Q ss_pred EEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEE
Q 015490 258 CRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTA 337 (406)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~ 337 (406)
++|+|+++ ++++++.|+.|++||+++++....+..|...|.+++|+|++++|++|+.||.|++||+++++.+..
T Consensus 190 ~~~~~~~~------~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 190 LSLAPDTR------LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT 263 (340)
T ss_dssp EEECTTSS------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCCC------EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 99999987 456778899999999999999999999999999999999999999999999999999999888777
Q ss_pred eec-ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 338 VKK-AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 338 ~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
+.. .+...|.+++|+|+|++|++|+.|+.|++||+.+++.+.
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence 641 233479999999999999999999999999998876543
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.1e-38 Score=288.38 Aligned_cols=241 Identities=17% Similarity=0.225 Sum_probs=204.1
Q ss_pred CCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeE
Q 015490 114 DLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNL 191 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i 191 (406)
..|.+++|+|++++|++++ |+.++||++.. .+....+. |...|.+++|+|++++|++++.|++|
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~--------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v 189 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIEN--------------RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV 189 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCC--------------CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcE
Confidence 3589999999999999988 88888877542 22233333 45789999999999999999999999
Q ss_pred EEEeCCCcceEeeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCeeeeecc------cCCcceEEEEEEEcCC
Q 015490 192 RVFKWPSLEIILNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSAVATPLA------KENDELFASCRFSPLN 264 (406)
Q Consensus 192 ~vwd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 264 (406)
++||+++++....+. +...+.+++|+| ++++|++++.|+.|++||+++++.+..+. ..+...+.+++|+|++
T Consensus 190 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 190 RIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred EEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 999999998776654 556799999999 89999999999999999999988776653 2355679999999999
Q ss_pred CCceEEEEEEEcCCCcEEEEEeCCCc------------eEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q 015490 265 NEDYVLYIAAITDRGASIVTWNTTTW------------KRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 265 ~~~~~l~~~~~~~~~~~i~~~d~~~~------------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
+. +++++.|+.|++||+++. .+...+.+|...|.+++|+|++++|++|+.|+.|++||+.++
T Consensus 269 ~~------l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 269 QS------VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp SE------EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CE------EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 83 567788999999999753 345667788899999999999999999999999999999999
Q ss_pred eEEEEeecccccceEEEEEcC------CCCeEEEEECCCcEEEEEecCCc
Q 015490 333 QVRTAVKKAHLGIVTALAFSY------DSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 333 ~~~~~~~~~~~~~v~~~~~sp------~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+.+..+. +|...|.+++|++ ++.+|++|+.||+|++|+++..+
T Consensus 343 ~~~~~l~-~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 343 NPLLMLQ-GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp CEEEEEE-CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred eEEEEEC-CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 9998886 8999999999986 67899999999999999997653
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-38 Score=282.20 Aligned_cols=257 Identities=14% Similarity=0.176 Sum_probs=195.7
Q ss_pred eeEE-ec-CCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 106 VAEL-RT-DSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 106 ~~~~-~~-h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
...+ .+ |.+.|.+++|+|++++|++++ |+.++||+.+....... .......+. |...|.+++|+|++++
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~-------~~~~~~~~~~h~~~V~~v~~sp~g~~ 121 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF-------EMDLLAIIEGHENEVKGVAWSNDGYY 121 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C-------CCEEEEEEC----CEEEEEECTTSCE
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc-------cceeEEEEcCCCCcEEEEEECCCCCE
Confidence 4445 34 999999999999999999998 99999987653210000 112233343 4478999999999999
Q ss_pred EEEeeCCCeEEEEeCCCc----ceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC--eeeeecccCCcceE
Q 015490 182 FAAGSENGNLRVFKWPSL----EIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS--AVATPLAKENDELF 255 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~~~ 255 (406)
|++|+.|++|++||++.. +.+..+.+|...|.+++|+|++++|++++.|++|++||..++ +++..+..| ...+
T Consensus 122 las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v 200 (330)
T 2hes_X 122 LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTV 200 (330)
T ss_dssp EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCE
T ss_pred EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcE
Confidence 999999999999999432 455667778889999999999999999999999999999876 456666654 5578
Q ss_pred EEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc--------eEEEEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 015490 256 ASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW--------KRIRTKQV-VREPVSSFNVSADGKLLAVGTASGDISI 326 (406)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~--------~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i 326 (406)
.+++|+|++.. ..+++++.|+.|++||++.+ .....+.. |...|.+++|++++ +|++++.||.|++
T Consensus 201 ~~~~~~~~~~~----~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~i 275 (330)
T 2hes_X 201 WSSDFDKTEGV----FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAV 275 (330)
T ss_dssp EEEEECCSSSS----CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEE
T ss_pred EEEEecCCCCe----eEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEE
Confidence 89999998432 14567788999999998764 34444444 78899999999765 8899999999999
Q ss_pred EECCCce--EEEEeeccccc-ceEEEEEcC--CCCeEEEEECCCcEEEEEecCC
Q 015490 327 IDSSSLQ--VRTAVKKAHLG-IVTALAFSY--DSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 327 ~d~~~~~--~~~~~~~~~~~-~v~~~~~sp--~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
||..+++ .......+|.. .|.+++|+| ++++|++|+.||+|++|++++.
T Consensus 276 w~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 276 YEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 9998764 33333236876 899999999 7899999999999999998753
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.3e-38 Score=304.50 Aligned_cols=275 Identities=17% Similarity=0.201 Sum_probs=225.6
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccc
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
|+++.++.+.+ + .+..|+... .+....+.+|.+.|++++|+|+|++|++++ |+.++||+.....
T Consensus 28 pdg~~l~~~~~---------~--~v~l~~~~~----~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 28 PAGDKIQYCNG---------T--SVYTVPVGS----LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp TTSSEEEEEET---------T--EEEEEETTC----SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred CCCCEEEeCCC---------C--EEEEecCCC----cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc
Confidence 36777776532 1 345556543 346778999999999999999999999998 8899998764321
Q ss_pred ccceeecceeccceeeecc-cccCcEEEEEECCCCCEEEEeeCC----CeEEEEeCCCcceEeeeeccCCceeEEEEccC
Q 015490 146 NTEIRRLGVKISEKVLSQL-ENVGQQLALTFDSEGTIFAAGSEN----GNLRVFKWPSLEIILNESEAHASVKDLSFSPD 220 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~ 220 (406)
.. ....+ .|.+.|.+++|+|+|++|++++.+ +.|++|| +++....+.+|...|++++|+|+
T Consensus 93 ~~------------~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~ 158 (611)
T 1nr0_A 93 HI------------LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPS 158 (611)
T ss_dssp CC------------EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSS
T ss_pred ce------------eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCC
Confidence 11 11122 245789999999999999998765 4777887 45566677888889999999999
Q ss_pred CC-EEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee--
Q 015490 221 GK-FLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-- 297 (406)
Q Consensus 221 ~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-- 297 (406)
+. .|++++.|++|++||..+++....+..| ...+.+++|+|+++ .+++++.|+.|++||..+++....+.
T Consensus 159 ~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H-~~~V~~v~fspdg~------~las~s~D~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 159 RPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-TKFVHSVRYNPDGS------LFASTGGDGTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp SSCEEEEEETTSCEEEEETTTBEEEEEECCC-SSCEEEEEECTTSS------EEEEEETTSCEEEEETTTCCEEEECBCT
T ss_pred CCeEEEEEeCCCeEEEEECCCCeEeeeeccc-cCceEEEEECCCCC------EEEEEECCCcEEEEECCCCcEeeeeccc
Confidence 87 6999999999999999998888887754 55799999999998 46677889999999999999888874
Q ss_pred -----ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee---------------------------------
Q 015490 298 -----VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK--------------------------------- 339 (406)
Q Consensus 298 -----~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------------------- 339 (406)
.|...|.+++|+|++++|++++.|++|++||+.+++.+..+.
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~ 311 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 311 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence 688999999999999999999999999999999876554321
Q ss_pred ---------cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 340 ---------KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 340 ---------~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
.+|...|++++|+|+|++|++++.|++|++||+.+++.
T Consensus 312 ~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 312 ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 36889999999999999999999999999999988754
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-37 Score=280.22 Aligned_cols=261 Identities=20% Similarity=0.226 Sum_probs=217.9
Q ss_pred cceeEEecCCCCceEEEEccC-CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccc-cCcEEEEEECCCCC
Q 015490 104 QPVAELRTDSDLPYRMAIHPH-GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLEN-VGQQLALTFDSEGT 180 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~-~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~ 180 (406)
+...+|+||.+.|++++|+|+ +++|++++ |+.++||++...... .......+.+ ...|.+++|+|+++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---------~~~~~~~l~~h~~~V~~~~~s~dg~ 99 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---------YGIPQRALRGHSHFVSDVVISSDGQ 99 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---------SEEEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---------cceeeEEEeCCCCCEEEEEECCCCC
Confidence 345679999999999999998 57888887 999999988754321 1122333444 47899999999999
Q ss_pred EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEE
Q 015490 181 IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRF 260 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (406)
+|++++.|+.|++|+............+...+..+.+++++++|++++.|+.+++||+............+...+..++|
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 99999999999999999988888877777889999999999999999999999999998776665555556677889999
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee-
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK- 339 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 339 (406)
++++.. .++++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++|+.|+.|++||+++.+.+..+.
T Consensus 180 ~~~~~~----~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 180 SPNSSN----PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp CSCSSS----CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ccCCCC----cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 988765 245566789999999999999999999999999999999999999999999999999998766544332
Q ss_pred -----------------------------------------------cccccceEEEEEcCCCCeEEEEECCCcEEEEEe
Q 015490 340 -----------------------------------------------KAHLGIVTALAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 340 -----------------------------------------------~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
.+|...|++++|+|+|++|++|+.||.|+|||+
T Consensus 256 ~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 256 GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 246677999999999999999999999999999
Q ss_pred cCCcC
Q 015490 373 EDKKK 377 (406)
Q Consensus 373 ~~~~~ 377 (406)
++|++
T Consensus 336 ~tGtr 340 (340)
T 4aow_A 336 TIGTR 340 (340)
T ss_dssp EC---
T ss_pred CCcCC
Confidence 99864
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-38 Score=289.03 Aligned_cols=260 Identities=15% Similarity=0.227 Sum_probs=210.8
Q ss_pred EecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccc----eeee---cccccCcEEEEEECCCCCE
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISE----KVLS---QLENVGQQLALTFDSEGTI 181 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~v~~~~~s~~g~~ 181 (406)
..+|...|.+++|+|+|++|++++++.+++|++. +++....+...... .... ...+...|.+++|+|+|++
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~--~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVS--DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECBSCEEEEETT--TCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEec--CCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 3469999999999999999999888888887654 33333332211000 0000 0012235899999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFS 261 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 261 (406)
|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+++++....+.. ...+.+++|+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~ 215 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--EDGVTTVAVS 215 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc--CCCcEEEEEE
Confidence 99999999999999999999888888989999999999999999999999999999999988777653 3458899999
Q ss_pred c-CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe-------eecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce
Q 015490 262 P-LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK-------QVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ 333 (406)
Q Consensus 262 ~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 333 (406)
| ++. .+++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|++|+.|+.|++||+++..
T Consensus 216 ~~~~~------~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 216 PGDGK------YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp STTCC------EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred CCCCC------EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 9 555 4567788999999999998887766 4678899999999999999999999999999997532
Q ss_pred ------------EEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 334 ------------VRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 334 ------------~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
....+. +|...|.+++|+|++++|++|+.|+.|++||+.+++.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp -----------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred CcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 334454 799999999999999999999999999999999887643
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-37 Score=276.21 Aligned_cols=256 Identities=15% Similarity=0.156 Sum_probs=203.4
Q ss_pred eEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC--CCEE
Q 015490 107 AELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE--GTIF 182 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~--g~~l 182 (406)
..+.+|.+.|.+++|+|+|++|++++ |+.++||+++.... +.+..+. |.+.|.+++|+++ +++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------------~~~~~l~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------------CCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------------EEEEEEccccCCeEEEEecCCCcCCEE
Confidence 45789999999999999999999998 99999988764322 2223333 4588999999874 8999
Q ss_pred EEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCCee--eeecccCCcceEE
Q 015490 183 AAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASSAV--ATPLAKENDELFA 256 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~~~~~~~~ 256 (406)
++|+.|++|++||+++++ ....+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+. .+...+.
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h~~~v~ 149 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVN 149 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CCSSCEE
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cccCccc
Confidence 999999999999998774 44556667789999999997 88999999999999999987642 22233 3456789
Q ss_pred EEEEEcCCCCce-------EEEEEEEcCCCcEEEEEeCCCce----EEEEeeecCCCeEEEEEcCCC---CEEEEEeCCC
Q 015490 257 SCRFSPLNNEDY-------VLYIAAITDRGASIVTWNTTTWK----RIRTKQVVREPVSSFNVSADG---KLLAVGTASG 322 (406)
Q Consensus 257 ~~~~~~~~~~~~-------~l~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~i~~~~~sp~~---~~l~~~~~dg 322 (406)
+++|+|+..... .--.+++++.|+.|++||+++++ ....+.+|...|.+++|+|++ ++|++++.|+
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 999999741000 00045677889999999998755 567788899999999999984 8999999999
Q ss_pred cEEEEECCCce---EEEEee-cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 323 DISIIDSSSLQ---VRTAVK-KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 323 ~i~i~d~~~~~---~~~~~~-~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+|++||+++.. ....+. ..|...|.+++|+|+|++|++++.|++|++|+....
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 99999997642 112221 367889999999999999999999999999998743
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=280.29 Aligned_cols=256 Identities=14% Similarity=0.151 Sum_probs=210.8
Q ss_pred cceeEEecCCC-CceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSD-LPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~-~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 181 (406)
+.+.++.+|.+ .|.+++|+|+|++|++++ |+.++||+.+...... .......|...|.+++|+|++++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~----------~~~~~~~h~~~v~~~~~sp~g~~ 75 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC----------KSVLSEGHQRTVRKVAWSPCGNY 75 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEE----------EEEECSSCSSCEEEEEECTTSSE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCccee----------eeeeccccCCcEEEEEECCCCCE
Confidence 46678889998 999999999999999988 9999999876431100 01111235588999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee---eeecccCCcceEE
Q 015490 182 FAAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV---ATPLAKENDELFA 256 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~~~~~~~~~ 256 (406)
|++|+.|++|++||+.++. .+..+.+|...|.+++|+|++++|++++.|++|++||++++.. ...+. .+...+.
T Consensus 76 l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~ 154 (345)
T 3fm0_A 76 LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVK 154 (345)
T ss_dssp EEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEE
T ss_pred EEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeE
Confidence 9999999999999987764 5667778888999999999999999999999999999987643 33444 3455689
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce--EEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK--RIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSS--- 331 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~--- 331 (406)
+++|+|++.. +++++.|+.|++||.++++ +...+.+|...|.+++|+|+|++|++++.|++|++||...
T Consensus 155 ~~~~~p~~~~------l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~ 228 (345)
T 3fm0_A 155 HVVWHPSQEL------LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGN 228 (345)
T ss_dssp EEEECSSSSC------EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTC
T ss_pred EEEECCCCCE------EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCC
Confidence 9999999984 5667789999999998765 4567888999999999999999999999999999999632
Q ss_pred ------------ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 332 ------------LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 332 ------------~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
.+.+..+...|...|.+++|+|++..|++++.|+.|++|++..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 229 EQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp TTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred CccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 133444443488999999999999999999999999999997654
No 25
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-37 Score=280.82 Aligned_cols=257 Identities=11% Similarity=0.138 Sum_probs=216.2
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIF 182 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 182 (406)
....++.+|.+.|++++|+|++++|++++ |+.+++|+.. ++.....+ ..+...|.+++|+|+|.++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~--~~~~~~~~-----------~~~~~~v~~~~~sp~g~~l 121 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF--TTNKEHAV-----------TMPCTWVMACAYAPSGCAI 121 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--TCCEEEEE-----------ECSSSCCCEEEECTTSSEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECC--CCCcceEE-----------ecCCCCEEEEEECCCCCEE
Confidence 46778999999999999999999999998 8888887643 22222111 1244679999999999999
Q ss_pred EEeeCCCeEEEEeCCCc------ceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEE
Q 015490 183 AAGSENGNLRVFKWPSL------EIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFA 256 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (406)
++|+.|+.+++|++... .....+..|...|.+++|+|++..|++++.|++|++||+++++.+..+..+ ...+.
T Consensus 122 asg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~ 200 (354)
T 2pbi_B 122 ACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-GADVL 200 (354)
T ss_dssp EEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEE
T ss_pred EEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-CCCeE
Confidence 99999999999998643 234455678889999999999999999999999999999999998888765 45688
Q ss_pred EEEEEcCCC-CceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEE
Q 015490 257 SCRFSPLNN-EDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVR 335 (406)
Q Consensus 257 ~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~ 335 (406)
+++|+|+.. . .+++++.|+.|++||+++++++..+..|...|.+++|+|++++|++|+.|++|++||+++.+.+
T Consensus 201 ~~~~~~~~~g~-----~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 201 CLDLAPSETGN-----TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EEEECCCSSCC-----EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCCC-----EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 899988532 2 4567788999999999999999999999999999999999999999999999999999998877
Q ss_pred EEeec-ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 336 TAVKK-AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 336 ~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
..+.. .+...+.+++|+|++++|++++.|++|++||+.+++.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 66641 233578999999999999999999999999998877543
No 26
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.6e-37 Score=285.18 Aligned_cols=272 Identities=14% Similarity=0.121 Sum_probs=219.0
Q ss_pred EEEEEEecCCCCccccceeEEecCCCCceEEEEccC----C---CeEEEEe-cCCeEEEEEecccccceeecceecccee
Q 015490 89 VLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPH----G---DGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKV 160 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~----~---~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
+.++.++..........+..+.+|...|.+++|+|+ + .+|++++ ++.+++|+++..... ....
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~---------~~~~ 108 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET---------KKVI 108 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT---------CCEE
T ss_pred EEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc---------cccc
Confidence 444444333222233468889999999999999999 9 8999887 899999887753210 0001
Q ss_pred eecccc------cCcEEEEEEC----CCCCE-EEEeeCCCeEEEEeCCC------cceEe-----eee-------ccCCc
Q 015490 161 LSQLEN------VGQQLALTFD----SEGTI-FAAGSENGNLRVFKWPS------LEIIL-----NES-------EAHAS 211 (406)
Q Consensus 161 ~~~~~~------~~~v~~~~~s----~~g~~-l~~~~~dg~i~vwd~~~------~~~~~-----~~~-------~~~~~ 211 (406)
...+.. ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. .+. .+...
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 222222 3789999999 99999 99999999999999988 66554 553 35668
Q ss_pred eeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc---C--CcceEEEEEEEcCCCCceEEEEEEEcCCC---cEEE
Q 015490 212 VKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK---E--NDELFASCRFSPLNNEDYVLYIAAITDRG---ASIV 283 (406)
Q Consensus 212 i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~i~ 283 (406)
|.+++|+|++ +|++++.|+.|++||+++++.+..+.. + ....+.+++|+|++.. +++++.+ +.|+
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~------l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL------LAIAHDSNSFGCIT 261 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE------EEEEEEETTEEEEE
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE------EEEEecCCCCceEE
Confidence 9999999999 999999999999999999998888775 3 0557899999999873 4455667 9999
Q ss_pred EEeCCCceEEEEeee-------------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec-----cc---
Q 015490 284 TWNTTTWKRIRTKQV-------------VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK-----AH--- 342 (406)
Q Consensus 284 ~~d~~~~~~~~~~~~-------------~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~--- 342 (406)
+||+++++.+..+.. |...|.+++|+|++++|++++.||.|++||+.+++.+..+.. .|
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 999999999999988 899999999999999999999999999999999999888851 45
Q ss_pred ------------ccceEEEEEcCCC----------CeEEEEECCCcEEEEEecCCc
Q 015490 343 ------------LGIVTALAFSYDS----------RALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 343 ------------~~~v~~~~~sp~~----------~~l~s~s~dg~i~iw~~~~~~ 376 (406)
...|.+++|+|++ ++|++++.||.|++|++++++
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8999999999998 799999999999999998874
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-36 Score=294.84 Aligned_cols=277 Identities=18% Similarity=0.243 Sum_probs=227.4
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecC---CeEEEEEec
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQN---SCRLFEWDE 143 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~---~~~i~~~~~ 143 (406)
|++++++.++..+ .+..|+..... ......+.+|.+.|.+++|+|+++.|++++++ ...+|.|+.
T Consensus 69 pdg~~lasg~~d~----------~v~lWd~~~~~--~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 69 PSGYYCASGDVHG----------NVRIWDTTQTT--HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp TTSSEEEEEETTS----------EEEEEESSSTT--CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCcEEEEEeCCC----------CEEEeECCCCc--ceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 3677777665433 45556653321 13456788999999999999999999988733 367888874
Q ss_pred ccccceeecceeccceeeeccc-ccCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCC
Q 015490 144 VENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGT-IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDG 221 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~ 221 (406)
. .. ...+. |...|.+++|+|++. .|++|+.|++|++||..+++....+.+|...|++++|+|++
T Consensus 137 ~--~~------------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 137 G--TS------------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp C--CB------------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS
T ss_pred C--CC------------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC
Confidence 2 11 11223 457899999999986 69999999999999999998888888898999999999999
Q ss_pred CEEEEEeCCCCEEEEEcCCCeeeeeccc------CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEE
Q 015490 222 KFLVSLGNRGPGRVWDLASSAVATPLAK------ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRT 295 (406)
Q Consensus 222 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~ 295 (406)
++|++++.|++|++||+.+++....+.. .|...+.+++|+|+++. +++++.|+.|++||+++++.+..
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~------l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK------IASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE------EEEEETTSEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE------EEEEeCCCeEEEEeCCCCceeee
Confidence 9999999999999999999988877742 45668999999999983 56778899999999988765543
Q ss_pred -------------------------------------------eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q 015490 296 -------------------------------------------KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 296 -------------------------------------------~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
+.+|...|.+++|+|+|++|++++.|++|++||+.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 277 IPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 3457788999999999999999999999999999999
Q ss_pred eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 333 QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 333 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+....+..+|...|.+++|++++ .+++++.|+++++|++.++.
T Consensus 357 ~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 357 ISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp CEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSS
T ss_pred ceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCcc
Confidence 88776645799999999999876 68899999999999987754
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-36 Score=293.66 Aligned_cols=263 Identities=19% Similarity=0.307 Sum_probs=220.2
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccc
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
++++.+++++..+ .+..|+... ..+..+.+|...|.+++|+|+++++++++ ++.+++|+.+
T Consensus 313 ~~~~~l~t~~~d~----------~i~~w~~~~-----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~--- 374 (577)
T 2ymu_A 313 PDGQTIASASDDK----------TVKLWNRNG-----QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--- 374 (577)
T ss_dssp TTSSEEEEEETTS----------CEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT---
T ss_pred CCCCEEEEEeCCC----------eEEEEeCCC-----CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC---
Confidence 3566666654433 244455443 45677889999999999999999999987 7778887632
Q ss_pred ccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEE
Q 015490 146 NTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFL 224 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 224 (406)
++ .+..+. +...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|++++|+||+++|
T Consensus 375 ~~------------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 375 GQ------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp CC------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CC------------EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 22 222222 4578999999999999999999999999995 567777888888899999999999999
Q ss_pred EEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeE
Q 015490 225 VSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVS 304 (406)
Q Consensus 225 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~ 304 (406)
++++.|+.|++||. +++....+..+ ...+.+++|+|+++ .+++++.|+.|++||. +++.+..+..|...|+
T Consensus 442 ~~~~~d~~v~~w~~-~~~~~~~~~~~-~~~v~~~~~spd~~------~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 442 ASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRGVAFSPDGQ------TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR 512 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECC-SSCEEEEEECTTSC------EEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred EEEcCCCEEEEEEC-CCCEEEEEcCC-CCCEEEEEEcCCCC------EEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEE
Confidence 99999999999997 55666666654 55689999999998 3566778999999995 5688899999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 305 SFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
+++|+|+|++|++++.||.|++||. +++.+..+. +|.+.|++++|+|||++|+|++.|++|++||
T Consensus 513 ~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~-~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 513 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999999999999999996 577888886 8999999999999999999999999999997
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.4e-36 Score=271.11 Aligned_cols=265 Identities=15% Similarity=0.200 Sum_probs=210.1
Q ss_pred cceeEEecCCCCceEEEE-----cc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEE
Q 015490 104 QPVAELRTDSDLPYRMAI-----HP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTF 175 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~-----sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 175 (406)
.....+.+|.+.|++++| ++ ++++|++++ |+.+++|++........ .......+. |...|.+++|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-------~~~~~~~l~~h~~~V~~~~~ 84 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-------FGIPHKALTGHNHFVSDLAL 84 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-------SEEEEEEECCCSSCEEEEEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-------cccccchhccCCCceEEEEE
Confidence 456689999999999999 77 899999998 99999998764321100 112223333 4478999999
Q ss_pred CCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeec-ccCCcce
Q 015490 176 DSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPL-AKENDEL 254 (406)
Q Consensus 176 s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~~~ 254 (406)
+|++.++++|+.|++|++||+++++....+.+|...|.+++|+|++++|++++.|++|++||+......... ...+...
T Consensus 85 ~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 85 SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp CSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence 999999999999999999999999999899999999999999999999999999999999999744332222 1245567
Q ss_pred EEEEEEEcCCCCceE----EEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 255 FASCRFSPLNNEDYV----LYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~----l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
+.+++|+|++..... --.+++++.|+.|++||. ..+....+..|...|.+++|+|+|++|++|+.||.|++||+.
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 899999998731000 003566778999999994 457777888999999999999999999999999999999994
Q ss_pred C-ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 331 S-LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 331 ~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
+ ......+. +...|.+++|+|+++++++ +.|+.|++|++.+++...
T Consensus 244 ~~~~~~~~~~--~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 244 NLTYPQREFD--AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp CCSSCSEEEE--CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCS
T ss_pred CCcccceeec--CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCc
Confidence 4 44444443 5567999999999987765 568889999998876543
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-37 Score=283.62 Aligned_cols=256 Identities=20% Similarity=0.216 Sum_probs=201.1
Q ss_pred EEecCCCCceEEEEccCCCeEEEEecC-----CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEE
Q 015490 108 ELRTDSDLPYRMAIHPHGDGIICALQN-----SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIF 182 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~~~~l~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 182 (406)
....|+..|.+++|+|||++|+++++. +..+|.|+..++..... .......+...|.+++|+|+++++
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~-------~~~~~~~~~~~V~~~~~s~d~~~l 109 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES-------LCTAGVQTEAGVTDVAWVSEKGIL 109 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG-------GCSEEEECSSCEEEEEEETTTEEE
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee-------EecccCCCCCCEEEEEEcCCCCEE
Confidence 345799999999999999999998743 34566676554432211 112233466889999999998654
Q ss_pred EEeeCCCeEEEEeCCCcceEe----eeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEE
Q 015490 183 AAGSENGNLRVFKWPSLEIIL----NESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASC 258 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (406)
+++.||+|++||+.+++... ...+|...|++++|+|++++|++++.|+.|++||+++++.+..+..+ ...+.++
T Consensus 110 -~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v 187 (357)
T 4g56_B 110 -VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-SSEVNCV 187 (357)
T ss_dssp -EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEE
T ss_pred -EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEE
Confidence 67789999999998876543 23356779999999999999999999999999999999999888764 4568999
Q ss_pred EEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee--ecCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCceEE
Q 015490 259 RFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ--VVREPVSSFNVSAD-GKLLAVGTASGDISIIDSSSLQVR 335 (406)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~i~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~ 335 (406)
+|++++.. ++++++.|+.|++||+++++....+. .+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+
T Consensus 188 ~~s~~~~~-----~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 188 AACPGKDT-----IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA 262 (357)
T ss_dssp EECTTCSS-----CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC
T ss_pred EEccCCCc-----eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe
Confidence 99999875 45666789999999999988766554 34567999999997 568999999999999999999988
Q ss_pred EEeecccccceEEEEEcCCC-CeEEEEECCCcEEEEEecCCcCC
Q 015490 336 TAVKKAHLGIVTALAFSYDS-RALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 336 ~~~~~~~~~~v~~~~~sp~~-~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
..+. +|...|++++|+|++ ++|++|+.|++|+|||+++++.+
T Consensus 263 ~~~~-~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 263 QTSA-VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEC-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred EEEe-ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 8885 899999999999987 67999999999999999987654
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-36 Score=270.78 Aligned_cols=255 Identities=15% Similarity=0.172 Sum_probs=216.4
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
....++.+|.+.|++++|+|++++|++++ |+.+++|+... ++ ....+. |...|.+++|+|++++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~--~~------------~~~~~~~h~~~v~~~~~~~~~~~ 79 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GK------------FEKTISGHKLGISDVAWSSDSNL 79 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--CC------------EEEEECCCSSCEEEEEECTTSSE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC--cc------------cchhhccCCCceEEEEEcCCCCE
Confidence 45667899999999999999999999988 88888876542 22 222222 4578999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFS 261 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 261 (406)
|++|+.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+..+ ...+.+++|+
T Consensus 80 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~ 158 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFN 158 (312)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-CCcEEEEEEc
Confidence 999999999999999999999899889889999999999999999999999999999999988887754 4568899999
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK 340 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 340 (406)
|+++. +++++.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 159 ~~~~~------l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~- 231 (312)
T 4ery_A 159 RDGSL------IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT- 231 (312)
T ss_dssp TTSSE------EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC-
T ss_pred CCCCE------EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEE-
Confidence 99873 4566789999999999988877764 345679999999999999999999999999999999888885
Q ss_pred ccccceE---EEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 341 AHLGIVT---ALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 341 ~~~~~v~---~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
+|...+. .....+++.+|++|+.||.|++||+.+++.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 232 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 6665432 233346789999999999999999998876543
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.2e-36 Score=268.59 Aligned_cols=271 Identities=14% Similarity=0.165 Sum_probs=222.1
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEe--cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELR--TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEV 144 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~ 144 (406)
+++++++++ .| .+..|+...... ...+..+. +|...|.+++|+|+++++++++ ++.+++|+++..
T Consensus 62 ~~~~l~~~~-dg----------~i~iw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 62 PTRHVYTGG-KG----------CVKVWDISHPGN-KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp SSSEEEEEC-BS----------EEEEEETTSTTC-CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC
T ss_pred CCcEEEEcC-CC----------eEEEEECCCCCc-eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 666766653 22 345555544321 22334444 8999999999999999999887 788888776543
Q ss_pred cccceeecceeccceeeecc-cccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCE
Q 015490 145 ENTEIRRLGVKISEKVLSQL-ENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKF 223 (406)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 223 (406)
.. .....+ .+...+.+++|+|+++++++++.||.|++||+++++....+..|...|.+++|+|++++
T Consensus 130 ~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 130 TP------------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp --------------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred Cc------------ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCE
Confidence 21 111222 24577999999999999999999999999999999988888888889999999999999
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCe
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPV 303 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i 303 (406)
|++++.|+.|++||+++++....+. +...+.+++|+|+++. +++++.++.|++||+++++.. .+..|...+
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~------l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v 268 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGYCPTGEW------LAVGMESSNVEVLHVNKPDKY-QLHLHESCV 268 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECTTSSE------EEEEETTSCEEEEETTSSCEE-EECCCSSCE
T ss_pred EEEEecCCcEEEEECCCCceEeeec--CCCceEEEEECCCCCE------EEEEcCCCcEEEEECCCCCeE-EEcCCccce
Confidence 9999999999999999998887764 3456889999999983 455567899999999987754 566788999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 304 SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 269 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred eEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999999999999999999999888665 488999999999999999999999999999974
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.9e-36 Score=274.07 Aligned_cols=276 Identities=12% Similarity=0.194 Sum_probs=209.9
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCC-CccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASN-SLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
++++++.++..+ .+.++.+..... .....+...+.+|...|.+++|+|++.++++++ |+.+++|++..
T Consensus 38 d~~~l~sgs~D~--------~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~-- 107 (343)
T 2xzm_R 38 DSPVLISGSRDK--------TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT-- 107 (343)
T ss_dssp CCCEEEEEETTS--------CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS--
T ss_pred CCCEEEEEcCCC--------EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--
Confidence 456666554332 345555443221 112346678999999999999999999999988 88888876542
Q ss_pred ccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeee---ccCCceeEEEEccCC
Q 015490 146 NTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNES---EAHASVKDLSFSPDG 221 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~s~~~ 221 (406)
++ .+..+. |...|.+++|+|++++|++++.|++|++||+... ...... .|...|.+++|+|++
T Consensus 108 ~~------------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 108 GT------------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp SC------------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCC
T ss_pred Cc------------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecccc
Confidence 22 223333 5588999999999999999999999999999743 332332 456689999999987
Q ss_pred ----------CEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-c
Q 015490 222 ----------KFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-W 290 (406)
Q Consensus 222 ----------~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~ 290 (406)
.+|++++.|+.|++||. ..+....+..+ ...+.+++|+|+++ .+++++.|+.|++||+.. .
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h-~~~v~~~~~s~~g~------~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAH-ESNVNHLSISPNGK------YIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECC-SSCEEEEEECTTSS------EEEEEETTCEEEEEESSCCS
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCc-cccceEEEECCCCC------EEEEEcCCCeEEEEECCCCc
Confidence 78999999999999994 45555555544 55789999999998 356778899999999954 3
Q ss_pred eEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE--Eee----------cccccceEEEEEcCCCCeE
Q 015490 291 KRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT--AVK----------KAHLGIVTALAFSYDSRAL 358 (406)
Q Consensus 291 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~----------~~~~~~v~~~~~sp~~~~l 358 (406)
.....+ .+...|.+++|+|++++++++ .|+.|++||+.+++... .+. .+|...|.+++|+|+|++|
T Consensus 247 ~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 247 YPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp SCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred ccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 333333 345679999999999988765 57789999998765433 221 1577889999999999999
Q ss_pred EEEECCCcEEEEEecCCc
Q 015490 359 VSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 359 ~s~s~dg~i~iw~~~~~~ 376 (406)
++|+.||.|++|++++++
T Consensus 325 ~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEETTSEEEEEEEEEEE
T ss_pred EEecCCceEEEEEEEccC
Confidence 999999999999998764
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=272.59 Aligned_cols=250 Identities=12% Similarity=0.175 Sum_probs=201.2
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecc--c-ccCcEEEEEECCCC
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL--E-NVGQQLALTFDSEG 179 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~v~~~~~s~~g 179 (406)
+.+..+.+|.+.|.+++|+|+ +|++++ |+.+++|++..... .....+ . |...|.+++|+|++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~------------~~~~~~~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF------------TLIDVLDETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC------------EEEEEECTTCCCSCEEEEEECTTS
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe------------EEEEEEecCCccCCEEEEEECCCC
Confidence 467789999999999999997 788877 89999988754211 111112 2 56789999999999
Q ss_pred CEEEEeeCCCeEEEEeCCC-------cceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC----eeeeecc
Q 015490 180 TIFAAGSENGNLRVFKWPS-------LEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS----AVATPLA 248 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~----~~~~~~~ 248 (406)
++|++|+.|++|++||++. .+....+.+|...|.+++|+|++++|++++.|++|++||++.. +.+..+.
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 9999999999999999853 3455667788889999999999999999999999999999532 3445555
Q ss_pred cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc--eEEEEeeecCCCeEEEEEcCC--CCEEEEEeCCCcE
Q 015490 249 KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW--KRIRTKQVVREPVSSFNVSAD--GKLLAVGTASGDI 324 (406)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~dg~i 324 (406)
. +...+.+++|+|++. .+++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++|+.|++|
T Consensus 151 ~-h~~~v~~v~~~p~~~------~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 151 E-HSQDVKHVIWHPSEA------LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp C-CSSCEEEEEECSSSS------EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCE
T ss_pred c-CCCceEEEEECCCCC------EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeE
Confidence 4 455789999999987 3567788999999998765 678888999999999999998 7799999999999
Q ss_pred EEEECCCc--------eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 325 SIIDSSSL--------QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 325 ~i~d~~~~--------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
++||+.++ .....+...|...|.+++|++++ +|++++.||+|++|++.++
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 99998754 34444443489999999999765 8999999999999999876
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-36 Score=274.28 Aligned_cols=279 Identities=11% Similarity=0.160 Sum_probs=230.3
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++..| .+..|+... .+.+..+.+|...|.+++|+|++++|++++ ++.+++|++.
T Consensus 43 ~~~~l~~~~~dg----------~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~---- 104 (369)
T 3zwl_B 43 EGDLLFSCSKDS----------SASVWYSLN----GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS---- 104 (369)
T ss_dssp TSCEEEEEESSS----------CEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT----
T ss_pred CCCEEEEEeCCC----------EEEEEeCCC----chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----
Confidence 566777664433 345555544 357788999999999999999999999987 7778887654
Q ss_pred cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC-----CeEEEEeCCCcc-----------eEeeeeccCC
Q 015490 147 TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN-----GNLRVFKWPSLE-----------IILNESEAHA 210 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----g~i~vwd~~~~~-----------~~~~~~~~~~ 210 (406)
..+....+.+...+.+++|+|+++++++++.+ +.|++||+.... ....+..+..
T Consensus 105 ----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 105 ----------NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp ----------TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred ----------CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 22334444567889999999999999999998 999999986553 2233444444
Q ss_pred --ceeEEEEccCCCEEEEEeCCCCEEEEEcCC-CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeC
Q 015490 211 --SVKDLSFSPDGKFLVSLGNRGPGRVWDLAS-SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNT 287 (406)
Q Consensus 211 --~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~ 287 (406)
.+.+++|+|++++|++++.|+.|++||+++ ++....+..+ ...+.+++|+|++.. +++++.++.|++||+
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~------l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPDLTY------FITSSRDTNSFLVDV 247 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEEEEECTTSSE------EEEEETTSEEEEEET
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeEEEECCCCCE------EEEecCCceEEEEEC
Confidence 899999999999999999999999999998 6666666654 556889999999873 455678999999999
Q ss_pred CCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCceEEEEeecccccceEEEEEcC
Q 015490 288 TTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASG--------------DISIIDSSSLQVRTAVKKAHLGIVTALAFSY 353 (406)
Q Consensus 288 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp 353 (406)
++++.+..+. +...+.+++|+|+++++++++.++ .+++||+.+++.+..+. +|...|.+++|+|
T Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 248 STLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ-GHFGPLNTVAISP 325 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE-CCSSCEEEEEECT
T ss_pred CCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee-cccCcEEEEEECC
Confidence 9999888887 667899999999999999999988 89999999999999886 8999999999999
Q ss_pred CCCeEEEEECCCcEEEEEecCCcCCCCchH
Q 015490 354 DSRALVSASMDSSVRVTVIEDKKKSGGLNL 383 (406)
Q Consensus 354 ~~~~l~s~s~dg~i~iw~~~~~~~~~~~~~ 383 (406)
++++|++++.||.|++|+++++.....+..
T Consensus 326 ~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 326 QGTSYASGGEDGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp TSSEEEEEETTSEEEEEEECHHHHTCCCHH
T ss_pred CCCEEEEEcCCCeEEEEECccccchhHHHH
Confidence 999999999999999999998776555543
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.9e-36 Score=276.72 Aligned_cols=279 Identities=11% Similarity=0.113 Sum_probs=221.1
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++..+ .+.+ |+..... ...+..+.+|...|.+++|+|++++|++++ ++.+++|++....
T Consensus 19 ~~~~l~~~~~d~--------~v~i--~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~- 85 (372)
T 1k8k_C 19 DRTQIAICPNNH--------EVHI--YEKSGNK--WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT- 85 (372)
T ss_dssp TSSEEEEECSSS--------EEEE--EEEETTE--EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE-
T ss_pred CCCEEEEEeCCC--------EEEE--EeCCCCc--EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe-
Confidence 666777664322 3444 4443321 136778899999999999999999999988 8899998875421
Q ss_pred cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcce---Eeee-eccCCceeEEEEccCCC
Q 015490 147 TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEI---ILNE-SEAHASVKDLSFSPDGK 222 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~---~~~~-~~~~~~i~~~~~s~~~~ 222 (406)
.. .......+...|.+++|+|++++|++++.|+.|++||++.+.. ...+ ..|...|.+++|+|+++
T Consensus 86 -~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 86 -WK---------PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp -EE---------EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred -ee---------eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 11 1112234567899999999999999999999999999987762 2233 44566999999999999
Q ss_pred EEEEEeCCCCEEEEEcC------------------CCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEE
Q 015490 223 FLVSLGNRGPGRVWDLA------------------SSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVT 284 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 284 (406)
+|++++.|+.|++||++ .++....+.. +...+.+++|+|+++. +++++.|+.|++
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~------l~~~~~d~~i~i 228 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSR------VAWVSHDSTVCL 228 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSE------EEEEETTTEEEE
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCE------EEEEeCCCEEEE
Confidence 99999999999999953 5667776664 4557899999999873 455678999999
Q ss_pred EeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC--ceE----------------------------
Q 015490 285 WNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSS--LQV---------------------------- 334 (406)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~--~~~---------------------------- 334 (406)
||+++++.+..+..|...+.+++|+|+++++++| .|+.|++|++.+ ++.
T Consensus 229 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1k8k_C 229 ADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 307 (372)
T ss_dssp EEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred EECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccc
Confidence 9999999999999998999999999999988887 899999999987 421
Q ss_pred ----E------EEeecccccceEEEEEc-CCC---CeEEEEECCCcEEEEEecCCcC
Q 015490 335 ----R------TAVKKAHLGIVTALAFS-YDS---RALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 335 ----~------~~~~~~~~~~v~~~~~s-p~~---~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
. ..+..+|...|++++|+ ++| .+|++++.||.|++|++++++.
T Consensus 308 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 308 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 0 22324899999999976 666 9999999999999999988664
No 37
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.5e-37 Score=276.50 Aligned_cols=254 Identities=12% Similarity=0.121 Sum_probs=197.9
Q ss_pred EEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECC--CCCEEE
Q 015490 108 ELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDS--EGTIFA 183 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~--~g~~l~ 183 (406)
.+.+|.+.|++++|+|+|++|++++ |+.++||++.... ...+..+. |.+.|.+++|++ ++++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~------------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG------------QILIADLRGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE------------EEEEEEEECCSSCEEEEEECCGGGSSCEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC------------cEEEEEEcCCCccEEEEEeCCCCCCCEEE
Confidence 4678999999999999999999998 8999999876421 11223333 458899999986 489999
Q ss_pred EeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCCeee--eecccCCcceEEE
Q 015490 184 AGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASSAVA--TPLAKENDELFAS 257 (406)
Q Consensus 184 ~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~ 257 (406)
+|+.|++|++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|++|++||++.+... ......+...+.+
T Consensus 76 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp EEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred EEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 99999999999998874 55566778889999999998 789999999999999999876322 2222334556788
Q ss_pred EEEEcCCCCceE-----------EEEEEEcCCCcEEEEEeCCCc---eEEEEeeecCCCeEEEEEcCCC----CEEEEEe
Q 015490 258 CRFSPLNNEDYV-----------LYIAAITDRGASIVTWNTTTW---KRIRTKQVVREPVSSFNVSADG----KLLAVGT 319 (406)
Q Consensus 258 ~~~~~~~~~~~~-----------l~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~i~~~~~sp~~----~~l~~~~ 319 (406)
++|+|+...... ...+++++.|+.|++||++.. +.+..+..|...|.+++|+|++ ++|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 999997410000 014678889999999999754 4677788899999999999986 8999999
Q ss_pred CCCcEEEEECCCc---e-EEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 320 ASGDISIIDSSSL---Q-VRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 320 ~dg~i~i~d~~~~---~-~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
.|++|++||+.+. . ....+ ..|...|.+++|+|++++|++++.|++|++|+...
T Consensus 236 ~D~~v~iw~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNTWSPKLL-HKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp TTCEEEEEECSSTTCCCCBCCEE-EECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CCCeEEEEEccCccccchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9999999998762 1 12233 36889999999999999999999999999999864
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.3e-37 Score=285.68 Aligned_cols=256 Identities=16% Similarity=0.206 Sum_probs=212.0
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
....++.+|.+.|++++|+|++++|++++ |+.++||+.. +++. ...+. |...|.+++|+|+|++
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~--~~~~------------~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL--TSQK------------THAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT--TTEE------------EEEEECCCTTCCCCEECTTSSE
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCcc------------ceEEecCCCCEEEEEECCCCCE
Confidence 46678999999999999999999999998 8888887654 2222 22222 4477999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcc-------eEeeeeccCCceeEEEEccCC-CEEEEEeCCCCEEEEEcCCCeeeeecc----c
Q 015490 182 FAAGSENGNLRVFKWPSLE-------IILNESEAHASVKDLSFSPDG-KFLVSLGNRGPGRVWDLASSAVATPLA----K 249 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~i~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~----~ 249 (406)
|++|+.|+.+++||+.+.. ....+.+|...|.++.|+|++ ..|++++.|++|++||+++++.+..+. .
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~ 202 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS 202 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS
T ss_pred EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC
Confidence 9999999999999986532 234566777899999999974 579999999999999999998876652 3
Q ss_pred CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-CceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 015490 250 ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-TWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIID 328 (406)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d 328 (406)
.+...+.++.|++.... ++++++.|+.|++||++ ..+.+..+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 203 ~h~~~v~~~~~~~~~~~-----~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 203 GHTADVLSLSINSLNAN-----MFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SCCSCEEEEEECSSSCC-----EEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred CCccCeEEEEeecCCCC-----EEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 45567889999885444 56777889999999998 4577888899999999999999999999999999999999
Q ss_pred CCCceEEEEeecc------cccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 329 SSSLQVRTAVKKA------HLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 329 ~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
+++++.+..+... +...|.+++|+|+|++|++|+.||.|++||+.+++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred CCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 9999988777421 1234899999999999999999999999999876643
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5e-35 Score=263.47 Aligned_cols=254 Identities=14% Similarity=0.204 Sum_probs=213.5
Q ss_pred eEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee
Q 015490 107 AELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS 186 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 186 (406)
....+|.+.|.+++|+|+++++++++++.+++|+++... .... ........+...|.+++|+|++++|++++
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~--~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPG--NKSP------VSQLDCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTT--CCSC------SEEEECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCC--ceee------eecccccCCCCcEEEEEEcCCCCEEEEEc
Confidence 344589999999999999999999888888887765422 1111 11111224568899999999999999999
Q ss_pred CCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCC
Q 015490 187 ENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLN 264 (406)
Q Consensus 187 ~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (406)
.||.|++||+++++ ....+..+...|.+++|+|++++|++++.|+.|++||+++++....+..+ ...+.+++|+|++
T Consensus 117 ~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISNDG 195 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS
T ss_pred CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc-cCceEEEEECCCC
Confidence 99999999998877 55566677779999999999999999999999999999999988888754 4568899999998
Q ss_pred CCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeeccccc
Q 015490 265 NEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLG 344 (406)
Q Consensus 265 ~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 344 (406)
+. +++++.++.|++||+++++.+..+. +...+.+++|+|+++++++++.++.|++||+.+++... +. .|..
T Consensus 196 ~~------l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~-~~~~ 266 (337)
T 1gxr_A 196 TK------LWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH-LHES 266 (337)
T ss_dssp SE------EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC-CCSS
T ss_pred CE------EEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec-CCcc
Confidence 73 4556789999999999998887765 56789999999999999999999999999999887654 33 6999
Q ss_pred ceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 345 IVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 345 ~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.|.+++|+|++++|++++.||.|++|++++++.+
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 9999999999999999999999999999987764
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.8e-36 Score=271.62 Aligned_cols=259 Identities=16% Similarity=0.177 Sum_probs=213.1
Q ss_pred eeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECC--CCCE
Q 015490 106 VAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDS--EGTI 181 (406)
Q Consensus 106 ~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~--~g~~ 181 (406)
...+.+|.+.|++++|+|++++|++++ |+.+++|+++..... ......+. |...|.+++|+| ++++
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----------WELSDSWRAHDSSIVAIDWASPEYGRI 73 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----------EEEEEEEECCSSCEEEEEECCGGGCSE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----------ceecceeccCCCcEEEEEEcCCCCCCE
Confidence 345789999999999999999999998 888999887643211 12223333 558899999999 6999
Q ss_pred EEEeeCCCeEEEEeCCCc---------ceEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCCeeeeecc--
Q 015490 182 FAAGSENGNLRVFKWPSL---------EIILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASSAVATPLA-- 248 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~---------~~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-- 248 (406)
|++|+.||.|++||++++ +....+..|...|.+++|+|+ +++|++++.|+.|++||+++++....+.
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc
Confidence 999999999999999876 456677778889999999999 9999999999999999998876544332
Q ss_pred ----------cCCcceEEEEEEEcC---CCCceEEEEEEEcCCCcEEEEEeCCCceE--EEEeeecCCCeEEEEEcCCC-
Q 015490 249 ----------KENDELFASCRFSPL---NNEDYVLYIAAITDRGASIVTWNTTTWKR--IRTKQVVREPVSSFNVSADG- 312 (406)
Q Consensus 249 ----------~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~i~~~~~sp~~- 312 (406)
..+...+.+++|+|+ +. .+++++.++.+.+|+...++. +..+..|...|.+++|+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 227 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSPE------KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIG 227 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSCC------EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSS
T ss_pred ccccccccccCCcccceeEEEeccCCCCCc------EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCC
Confidence 134556889999997 44 345566788888888877665 67777888999999999998
Q ss_pred ---CEEEEEeCCCcEEEEECCCc----------------------------------------------eEEEEeecccc
Q 015490 313 ---KLLAVGTASGDISIIDSSSL----------------------------------------------QVRTAVKKAHL 343 (406)
Q Consensus 313 ---~~l~~~~~dg~i~i~d~~~~----------------------------------------------~~~~~~~~~~~ 343 (406)
++|++++.||.|++||++++ +.+..+. +|.
T Consensus 228 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~ 306 (351)
T 3f3f_A 228 RWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHN 306 (351)
T ss_dssp CSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC-TTS
T ss_pred CcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-ccc
Confidence 89999999999999999764 4555554 799
Q ss_pred cceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 344 GIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 344 ~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
..|++++|+|++++|++++.||.|++|++.+++.+..+
T Consensus 307 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 307 GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999999999999999999998765443
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-36 Score=275.80 Aligned_cols=240 Identities=15% Similarity=0.170 Sum_probs=198.1
Q ss_pred CCCCceEEEEccC----CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECC-CCCEEEE
Q 015490 112 DSDLPYRMAIHPH----GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDS-EGTIFAA 184 (406)
Q Consensus 112 h~~~v~~~~~sp~----~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~-~g~~l~~ 184 (406)
|...|++++|+|+ +.+|++++ ++.+++|++. +++ .+..+. +...|.+++|+| ++++|++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~~------------~~~~~~~~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI--TMQ------------CIKHYVGHGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT--TCC------------EEEEEESCCSCEEEEEECSSCTTEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch--hce------------EeeeecCCCCcEEEEEECCCCCCEEEE
Confidence 6788999999999 56788887 7777776543 222 223333 568899999999 8999999
Q ss_pred eeCCCeEEEEeCCCcceEeee---eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc------------
Q 015490 185 GSENGNLRVFKWPSLEIILNE---SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK------------ 249 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~------------ 249 (406)
++.||.|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+..
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRP 213 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSC
T ss_pred EeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccc
Confidence 999999999999999888777 56777999999999999999999999999999988765443321
Q ss_pred ---------------CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce--------------EEEEeeecC
Q 015490 250 ---------------ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK--------------RIRTKQVVR 300 (406)
Q Consensus 250 ---------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~ 300 (406)
.+...+.+++|+ ++ .+++++.++.|++||++++. .+..+..|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~------~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (366)
T 3k26_A 214 FISQKIHFPDFSTRDIHRNYVDCVRWL--GD------LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 285 (366)
T ss_dssp CCCEEECCCSEEECSSCSSCCCEEEEE--TT------EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS
T ss_pred ccceeeccCccccccCCcceEEEEEEc--CC------EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC
Confidence 145668899998 33 35667889999999998764 377888888
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCceE----EEEeeccc--ccceEEEEEcCCCCeEEEEECCCcEEEEEe
Q 015490 301 EPVSSFNVSAD--GKLLAVGTASGDISIIDSSSLQV----RTAVKKAH--LGIVTALAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 301 ~~i~~~~~sp~--~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~--~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
..|.+++|+|+ +++|++|+.||.|++||+.+++. ...+. .| ...|.+++|+|++++|++++.||.|++||+
T Consensus 286 ~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 286 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT-HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc-ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 89999999999 99999999999999999998753 33553 56 789999999999999999999999999998
Q ss_pred cC
Q 015490 373 ED 374 (406)
Q Consensus 373 ~~ 374 (406)
.+
T Consensus 365 ~~ 366 (366)
T 3k26_A 365 LR 366 (366)
T ss_dssp --
T ss_pred cC
Confidence 63
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=281.97 Aligned_cols=253 Identities=15% Similarity=0.247 Sum_probs=214.1
Q ss_pred cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC-CCEEEEeeC
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE-GTIFAAGSE 187 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~-g~~l~~~~~ 187 (406)
.|...|.+++|+|++.+|++++ ++.+++|+++..... ......+. |...|.+++|+|+ +++|++++.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 134 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA----------INSMARFSNHSSSVKTVKFNAKQDNVLASGGN 134 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC----------CCEEEECCCSSSCCCEEEECSSSTTBEEEECS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccc----------ccchhhccCCccceEEEEEcCCCCCEEEEEcC
Confidence 5889999999999999999987 889999877642111 11222333 5588999999998 899999999
Q ss_pred CCeEEEEeCCCcc------eEee---eeccCCceeEEEEccC-CCEEEEEeCCCCEEEEEcCCCeeeeecccCC-----c
Q 015490 188 NGNLRVFKWPSLE------IILN---ESEAHASVKDLSFSPD-GKFLVSLGNRGPGRVWDLASSAVATPLAKEN-----D 252 (406)
Q Consensus 188 dg~i~vwd~~~~~------~~~~---~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-----~ 252 (406)
||.|++||+.+++ .... ...|...|.+++|+|+ +.+|++++.|+.|++||+++++....+..+. .
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIK 214 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCC
T ss_pred CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccC
Confidence 9999999998876 3322 3456679999999999 7899999999999999999999888887653 5
Q ss_pred ceEEEEEEEcCCCCceEEEEEEEcCCCc---EEEEEeCCCc-eEEEEee-ecCCCeEEEEEcC-CCCEEEEEeCCCcEEE
Q 015490 253 ELFASCRFSPLNNEDYVLYIAAITDRGA---SIVTWNTTTW-KRIRTKQ-VVREPVSSFNVSA-DGKLLAVGTASGDISI 326 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~i~~~d~~~~-~~~~~~~-~~~~~i~~~~~sp-~~~~l~~~~~dg~i~i 326 (406)
..+.+++|+|++.. ++++++.++ .|++||++++ +.+..+. .|...|.+++|+| ++++|++++.|+.|++
T Consensus 215 ~~v~~~~~~~~~~~-----~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~ 289 (416)
T 2pm9_A 215 QQLSVVEWHPKNST-----RVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLL 289 (416)
T ss_dssp CCEEEEEECSSCTT-----EEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEE
T ss_pred CceEEEEECCCCCC-----EEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEE
Confidence 67999999999865 445556677 9999999986 5667777 7889999999999 9999999999999999
Q ss_pred EECCCceEEEEeecccccceEEEEEcCCC-CeEEEEECCCcEEEEEecCCcCCC
Q 015490 327 IDSSSLQVRTAVKKAHLGIVTALAFSYDS-RALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 327 ~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
||+++++.+..+. .|...|.+++|+|++ .+|++++.|+.|++|++.+.+...
T Consensus 290 wd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 290 WNPESAEQLSQFP-ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp ECSSSCCEEEEEE-CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred eeCCCCccceeec-CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 9999999999886 899999999999998 899999999999999999877543
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.6e-35 Score=285.27 Aligned_cols=269 Identities=18% Similarity=0.299 Sum_probs=222.5
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccc
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
++++.+++++..+ .+..|+.+. +.+..+.+|...|.+++|+|+++.+++++ ++.+++|+.+..
T Consensus 272 ~d~~~l~~~~~d~----------~i~~w~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~- 335 (577)
T 2ymu_A 272 PDGQTIASASDDK----------TVKLWNRNG-----QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ- 335 (577)
T ss_dssp TTSSEEEEEETTS----------CEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-
T ss_pred CCCCEEEEEeCCC----------EEEEEeCCC-----cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-
Confidence 3556666654332 244455433 46778899999999999999999999987 888999874321
Q ss_pred ccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 146 NTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
.. .....+...+.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|++++|+
T Consensus 336 --~~-----------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 336 --HL-----------QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp --EE-----------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred --ee-----------EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 11 111234578999999999999999999999999995 5677778888888999999999999999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEE
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSS 305 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~ 305 (406)
+++.|+.|++||. +++....+..+ ...+.+++|+|+++. +++++.|+.|++||.. ++.+..+..|...|.+
T Consensus 402 ~~~~d~~v~~~~~-~~~~~~~~~~~-~~~v~~~~~s~d~~~------l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~ 472 (577)
T 2ymu_A 402 SASDDKTVKLWNR-NGQLLQTLTGH-SSSVWGVAFSPDDQT------IASASDDKTVKLWNRN-GQLLQTLTGHSSSVRG 472 (577)
T ss_dssp EEETTSEEEEECT-TCCEEEEEECC-SSCEEEEEECTTSSE------EEEEETTSEEEEEETT-SCEEEEEECCSSCEEE
T ss_pred EEeCCCEEEEEeC-CCCEEEEecCC-CCCeEEEEECCCCCE------EEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEE
Confidence 9999999999996 56666666654 556889999999983 5566789999999964 5778888999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 306 FNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 306 ~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++|+|++++|++++.|+.|++||. +++.+..+. +|...|++++|+|+|++|++++.|+.|++||. +++.
T Consensus 473 ~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~ 541 (577)
T 2ymu_A 473 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 541 (577)
T ss_dssp EEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCE
T ss_pred EEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCE
Confidence 999999999999999999999995 577888886 89999999999999999999999999999995 4444
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.3e-35 Score=271.08 Aligned_cols=266 Identities=18% Similarity=0.233 Sum_probs=217.1
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-cc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NV 167 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (406)
.++.|+..+... ..+..+.+|...|++++|+|+|++|++|+ |+.++||++.. + +.+..+. |.
T Consensus 126 tV~lWd~~tg~~--~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~--~------------~~~~~~~~h~ 189 (420)
T 4gga_A 126 SVYLWSASSGDI--LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--Q------------KRLRNMTSHS 189 (420)
T ss_dssp EEEEEETTTCCE--EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--T------------EEEEEECCCS
T ss_pred EEEEEECCCCCE--EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC--C------------cEEEEEeCCC
Confidence 567777765432 23345567889999999999999999998 89999977642 2 2333333 34
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeee-
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE-IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVAT- 245 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~- 245 (406)
..+.++++ ++.+|++|+.|+.+++||..... .+..+..|...+..+.|+|+++++++++.|+.+++|+..+++...
T Consensus 190 ~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~ 267 (420)
T 4gga_A 190 ARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 267 (420)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC
T ss_pred CceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce
Confidence 67887777 56799999999999999987654 455667788899999999999999999999999999998765422
Q ss_pred --ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe--CC
Q 015490 246 --PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT--AS 321 (406)
Q Consensus 246 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d 321 (406)
.....+...+.+++|+|.+.. ++.+++++.|+.|++||+.+++....+..+ ..+.++.|+|+++.+++++ .|
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~---~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSN---VLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTT---EEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTT
T ss_pred eeeeecccCCceeeeeeCCCccc---EEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCC
Confidence 112234567899999999886 445566788999999999999998888766 5789999999999988765 68
Q ss_pred CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 322 GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 322 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
+.|+|||+.+++.+..+. +|.+.|++++|+|||++|+||+.|++|+|||+.+....
T Consensus 344 ~~I~iwd~~~~~~v~~l~-gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 344 NQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp CCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred CEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 999999999999999996 99999999999999999999999999999999765543
No 45
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=258.15 Aligned_cols=274 Identities=12% Similarity=0.101 Sum_probs=224.7
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++.+++++..| .+..|+... ......+..|...|.+++|+|+++++++++ ++.+++|++.....
T Consensus 28 ~~~~l~s~~~dg----------~v~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 28 DDSKVASVSRDG----------TVRLWSKDD----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp ETTEEEEEETTS----------EEEEEEESS----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCEEEEEEcCC----------cEEEEECCC----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 666767664433 344555443 246677889999999999999999999988 88888887654221
Q ss_pred cceeecceeccceeeecc-cccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEcc-CCCEE
Q 015490 147 TEIRRLGVKISEKVLSQL-ENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSP-DGKFL 224 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l 224 (406)
.+....+ .+...|.+++| +++++++++.||.|++|| .++....+..|...+.+++|+| +++++
T Consensus 94 -----------~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 94 -----------EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp -----------SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred -----------CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 1122222 34578999999 678999999999999999 6677777888888999999998 89999
Q ss_pred EEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeE
Q 015490 225 VSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVS 304 (406)
Q Consensus 225 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~ 304 (406)
++++.|+.|++|| .++....+...+...+.+++|+|++. +++++.++.|++||+++++.+..+..|...|.
T Consensus 159 ~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 159 LTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-------FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp EEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-------EEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-------EEEccCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 9999999999999 45666667665677899999999985 34567899999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCch
Q 015490 305 SFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~~ 382 (406)
+++|+|++ .|++++.||.|++||+.+++....+. .|...|.+++|+|+++ +++++.||.|++|++++++......
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT-LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE-CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe-ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 99999999 58899999999999999999998886 7889999999999998 6679999999999999987765543
No 46
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-35 Score=270.00 Aligned_cols=238 Identities=15% Similarity=0.226 Sum_probs=203.3
Q ss_pred CCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCC
Q 015490 112 DSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENG 189 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg 189 (406)
|.+.|++++|+|++++|++++ ++.+++|+ .++. ....+. +...|.+++|+|++++|++++.|+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~---~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN---KTGA------------LLNVLNFHRAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE---TTSC------------EEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe---CCCC------------eeeeccCCCccEEEEEECCCCCEEEEEecCC
Confidence 788999999999999999987 88888886 2222 222233 557899999999999999999999
Q ss_pred eEEEEeCCCcceEee--------------------------------------------------------eeccCCcee
Q 015490 190 NLRVFKWPSLEIILN--------------------------------------------------------ESEAHASVK 213 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~--------------------------------------------------------~~~~~~~i~ 213 (406)
.|++||+.+++.... +..|...|.
T Consensus 172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999999977654332 224455899
Q ss_pred EEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEE
Q 015490 214 DLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRI 293 (406)
Q Consensus 214 ~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~ 293 (406)
+++|+|++++|++++.|+.|++||+++++....+..+ ...+.+++|+|++ . +++++.++.|++||+++++.+
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~-~------l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVGDD-K------VISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC-SSCEEEEEEETTT-E------EEEEETTSEEEEEETTTTEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC-CccEEEEEECCCC-E------EEEEeCCCcEEEEECCCCcEe
Confidence 9999999999999999999999999998888877654 5568899999988 3 345567999999999999999
Q ss_pred EEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce--------------------EEEEeeccccc--ceEEEEE
Q 015490 294 RTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ--------------------VRTAVKKAHLG--IVTALAF 351 (406)
Q Consensus 294 ~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--------------------~~~~~~~~~~~--~v~~~~~ 351 (406)
..+..|...+.+++|+|++++|++++.||.|++||+.+++ .+..+. .|.. .|.+++|
T Consensus 324 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ-SSQDNDYIFDLSW 402 (425)
T ss_dssp EEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC-CTTCCCCEEEEEE
T ss_pred EecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc-CcccCCceEEEEc
Confidence 9999999999999999999999999999999999999887 777775 7766 9999999
Q ss_pred cCCCCeEEEEECCCcEEEEEec
Q 015490 352 SYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 352 sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
+|++++|++++.||.|++|+++
T Consensus 403 s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 403 NCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CTTSSEEEEEESSSCCEEEECC
T ss_pred cCCCceEEEEecCceEEEEeec
Confidence 9999999999999999999985
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=286.02 Aligned_cols=276 Identities=11% Similarity=0.088 Sum_probs=206.6
Q ss_pred ccEEEEEEecCCCCccccceeEEecCCCCceEEEEccC------CCeEEEEe-cCCeEEEEEecccccceeecceeccce
Q 015490 87 NAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPH------GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEK 159 (406)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~------~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 159 (406)
+.+.++.++... ........+.+|.+.|.+++|+|+ +.+|++++ |++++||++............ ...
T Consensus 183 ~tI~iWd~~~~~--~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~---~~~ 257 (524)
T 2j04_B 183 SCIQIFKMNTST--LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM---CEK 257 (524)
T ss_dssp EEEEEEEEETTT--CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC---CCS
T ss_pred ceEEEEEccCCC--CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee---ecC
Confidence 455666655432 212223457788999999999997 46888887 999999887643211000000 011
Q ss_pred eeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcce-EeeeeccCCceeEE--EEccCC-CEEEEEeCCCCEE
Q 015490 160 VLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEI-ILNESEAHASVKDL--SFSPDG-KFLVSLGNRGPGR 234 (406)
Q Consensus 160 ~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~i~~~--~~s~~~-~~l~s~s~d~~i~ 234 (406)
....+. |...|.+++|++++ .|++|+.||+|++||++++.. ...+..|...|+++ +|+|++ ++|++++.|++|+
T Consensus 258 p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 258 PSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp CSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred ceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 112233 44789999999864 899999999999999987643 34567788899999 578887 8999999999999
Q ss_pred EEEcCCCeeeeecccCCc-ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCC
Q 015490 235 VWDLASSAVATPLAKEND-ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGK 313 (406)
Q Consensus 235 iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~ 313 (406)
|||++++++...+..+.. ..+.+++|+|++.. +++++.++.|++||++++.++..+.+|...|.+++|+|+|+
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~------l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS------YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTE------EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCe------EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence 999998877665554432 23678999999873 45667889999999999988888889999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCc--------------------------------------------eEEEEeecccccceEEE
Q 015490 314 LLAVGTASGDISIIDSSSL--------------------------------------------QVRTAVKKAHLGIVTAL 349 (406)
Q Consensus 314 ~l~~~~~dg~i~i~d~~~~--------------------------------------------~~~~~~~~~~~~~v~~~ 349 (406)
+|++|+.|++|++||+... ..+..+ .+|...|.++
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l-~gh~~~V~~V 489 (524)
T 2j04_B 411 MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKI-DAHGINITCT 489 (524)
T ss_dssp BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC--------------CCCSCCCE
T ss_pred eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeee-cCCCceEEEE
Confidence 9999999999999985321 001112 2578889999
Q ss_pred EEcCCCC---eEEEEECCCcEEEEEecCC
Q 015490 350 AFSYDSR---ALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 350 ~~sp~~~---~l~s~s~dg~i~iw~~~~~ 375 (406)
+|+|++. .+++|+.||.|+||+++-.
T Consensus 490 afsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 490 KWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred ECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 9999954 8999999999999998653
No 48
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=269.76 Aligned_cols=247 Identities=12% Similarity=0.136 Sum_probs=196.9
Q ss_pred EecCCCCceEEEEccC---CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEE------ECC
Q 015490 109 LRTDSDLPYRMAIHPH---GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALT------FDS 177 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~---~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~------~s~ 177 (406)
..+|...|.+++|+|+ +.++++++ ++.+++|++... + .....+. |...|.++. |+|
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~-----------~~~~~~~~~~~~v~~~~~~~~~~~s~ 127 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP--E-----------MPVYSVKGHKEIINAIDGIGGLGIGE 127 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC--S-----------SCSEEECCCSSCEEEEEEESGGGCC-
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC--C-----------ccEEEEEecccceEEEeeccccccCC
Confidence 3479999999999999 68888887 888888766532 1 1222233 457899994 578
Q ss_pred CCCEEEEeeCCCeEEEEeCCCcc-eEeeeeccCC----ceeEEE----EccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 178 EGTIFAAGSENGNLRVFKWPSLE-IILNESEAHA----SVKDLS----FSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 178 ~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~----~i~~~~----~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
++++|++++.||.|++||+++++ ....+..+.. .+.+++ |+|++++|++++.|+.|++||+++++.....
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~- 206 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET- 206 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-
Confidence 99999999999999999999876 5555544433 788888 7899999999999999999999998875543
Q ss_pred cCCcceEEEEEEEc---CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe-----eecCCCeEEEEEcCCCC-EEEEEe
Q 015490 249 KENDELFASCRFSP---LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK-----QVVREPVSSFNVSADGK-LLAVGT 319 (406)
Q Consensus 249 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~-----~~~~~~i~~~~~sp~~~-~l~~~~ 319 (406)
.+...+.+++|+| ++. .+++++.++.|++||+++++....+ ..|...|.+++|+|+++ +|++++
T Consensus 207 -~~~~~v~~~~~~~~~~~~~------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 207 -NIKNGVCSLEFDRKDISMN------KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp -ECSSCEEEEEESCSSSSCC------EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred -CCCCceEEEEcCCCCCCCC------EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe
Confidence 3455789999999 666 3455678999999999887654443 37889999999999998 899999
Q ss_pred CCCcEEEEECCCc-------------------eEEEEeecccccceEEEEEcCCCCeEE-EEECCCcEEEEEecCCcC
Q 015490 320 ASGDISIIDSSSL-------------------QVRTAVKKAHLGIVTALAFSYDSRALV-SASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 320 ~dg~i~i~d~~~~-------------------~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~s~dg~i~iw~~~~~~~ 377 (406)
.||.|++||++++ +.+..+. +|...|.+++|+|++++|+ +++.|+.|++||+.+.+.
T Consensus 280 ~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 280 GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT-LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCCcEEEeecCCCcccccccCCCCccccccccceeeccc-cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9999999998753 3455564 7999999999999999998 899999999999988764
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=271.08 Aligned_cols=253 Identities=16% Similarity=0.188 Sum_probs=207.5
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC--CC
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE--GT 180 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~--g~ 180 (406)
.+..+.+|.+.|++++|+|++++|++++ ++.++||+++..+. .....+. |...|.+++|+++ ++
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------------EEEEEECCCSSCEEEEEECCGGGCS
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------------eeeeEecCCCCcEEEEEeCCCCCCC
Confidence 5667899999999999999999999997 89999998874322 2223333 4588999999987 89
Q ss_pred EEEEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCCeeeee-cccCCcceE
Q 015490 181 IFAAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASSAVATP-LAKENDELF 255 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~~~-~~~~~~~~~ 255 (406)
+|++++.||.|++||+.+++ ....+..|...|.+++|+|+ +++|++++.|+.|++||++++..... ....+...+
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce
Confidence 99999999999999999887 66667777889999999999 99999999999999999988743322 122345678
Q ss_pred EEEEEEcC-------------CCCceEEEEEEEcCCCcEEEEEeCCCce----EEEEeeecCCCeEEEEEcCC---CCEE
Q 015490 256 ASCRFSPL-------------NNEDYVLYIAAITDRGASIVTWNTTTWK----RIRTKQVVREPVSSFNVSAD---GKLL 315 (406)
Q Consensus 256 ~~~~~~~~-------------~~~~~~l~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~i~~~~~sp~---~~~l 315 (406)
.+++|+|. +. .+++++.|+.|++||++++. ....+..|...|.+++|+|+ +++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR------KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp EEEEECCCC----------CTTC------EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred EEEEEcCccccccccccCCCCCC------EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE
Confidence 99999994 55 35666789999999997653 45667788899999999999 8999
Q ss_pred EEEeCCCcEEEEECCCce---EEEEe-ecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 316 AVGTASGDISIIDSSSLQ---VRTAV-KKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 316 ~~~~~dg~i~i~d~~~~~---~~~~~-~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
++++.||.|++||+.++. ....+ ...|...|.+++|+|++++|++++.||.|++|++..+
T Consensus 225 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 999999999999998863 11111 1248889999999999999999999999999999854
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.8e-35 Score=268.58 Aligned_cols=263 Identities=20% Similarity=0.224 Sum_probs=212.8
Q ss_pred EEEEEecCCCCccccceeEEec-CCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecc-cc
Q 015490 90 LLSHFDFASNSLSDQPVAELRT-DSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL-EN 166 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (406)
.+..|+..... ....+.. |...|.+++|+|++++|++++ ++.+++|++.. ++ .+..+ .+
T Consensus 114 ~v~lw~~~~~~----~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~--~~------------~~~~~~~~ 175 (401)
T 4aez_A 114 NVYVWNADSGS----VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES--QT------------KLRTMAGH 175 (401)
T ss_dssp EEEEEETTTCC----EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--CC------------EEEEECCC
T ss_pred eEEEeeCCCCc----EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC--Ce------------EEEEecCC
Confidence 45666665532 3344443 899999999999999999987 88888876542 22 22223 35
Q ss_pred cCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-CcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeee
Q 015490 167 VGQQLALTFDSEGTIFAAGSENGNLRVFKWP-SLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVAT 245 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~ 245 (406)
...|.+++| ++++|++|+.||.|++||++ .......+..|...|.+++|+|++++|++++.|+.|++||+++++...
T Consensus 176 ~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 253 (401)
T 4aez_A 176 QARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF 253 (401)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE
T ss_pred CCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE
Confidence 588999999 56799999999999999998 456677777888899999999999999999999999999999998888
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEE--cCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEE--eCC
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAI--TDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVG--TAS 321 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~d 321 (406)
.+..+ ...+.+++|+|++.. ++++ ++.|+.|++||+++++.+..+. +...+.+++|+|++++++++ +.|
T Consensus 254 ~~~~~-~~~v~~~~~~p~~~~-----ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 254 TKTNH-NAAVKAVAWCPWQSN-----LLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPD 326 (401)
T ss_dssp EECCC-SSCCCEEEECTTSTT-----EEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTT
T ss_pred EecCC-cceEEEEEECCCCCC-----EEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCC
Confidence 77654 556889999999886 3344 4489999999999999988886 45789999999999999995 489
Q ss_pred CcEEEEECCCceEEEE--eecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 322 GDISIIDSSSLQVRTA--VKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 322 g~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
|.|++||+.+++.... +. +|...|.+++|+|++++|++++.||.|++|++.+++.+..
T Consensus 327 g~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred CcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 9999999998655444 43 7999999999999999999999999999999999887544
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.8e-35 Score=287.92 Aligned_cols=248 Identities=17% Similarity=0.234 Sum_probs=203.0
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecc-cccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL-ENVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~ 181 (406)
.....+.+|...|.+++|+|++++|++++ |+.++||++.. +. ....+ .|...|.+++|+|++++
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~--~~------------~~~~~~~h~~~v~~~~~s~~~~~ 486 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA--GV------------STRRFVGHTKDVLSVAFSLDNRQ 486 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TE------------EEEEEECCSSCEEEEEECTTSSC
T ss_pred cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC--Cc------------ceeEEeCCCCCEEEEEEeCCCCE
Confidence 45678899999999999999999999998 88888877542 22 22233 35588999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeee---eccCCceeEEEEccCC--CEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNE---SEAHASVKDLSFSPDG--KFLVSLGNRGPGRVWDLASSAVATPLAKENDELFA 256 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~s~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (406)
|++|+.|++|++||.......... .+|...|.+++|+|++ ..|++++.|++|++||+++++....+..| ...+.
T Consensus 487 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h-~~~v~ 565 (694)
T 3dm0_A 487 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH-TGYVS 565 (694)
T ss_dssp EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEE
T ss_pred EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEE
Confidence 999999999999998654333222 3456689999999987 58999999999999999999888887755 55689
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
+++|+|+++ .+++++.|+.|++||+++++.+..+..+ ..+.+++|+|++.++++++ ++.|++||+++++.+.
T Consensus 566 ~v~~spdg~------~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 566 TVAVSPDGS------LCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE 637 (694)
T ss_dssp EEEECTTSS------EEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEEEeCCCC------EEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh
Confidence 999999998 4667788999999999999988877654 6799999999999888776 5669999999998877
Q ss_pred Eeecc------------------cccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 337 AVKKA------------------HLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 337 ~~~~~------------------~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
.+... +...+++++|+|+|++|++|+.||+|++|++..
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred hhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 66411 112378999999999999999999999999863
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=281.28 Aligned_cols=288 Identities=9% Similarity=0.139 Sum_probs=221.6
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccC-CCeEEEEe-cCCeEEEEEeccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPH-GDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~-~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
+++++++++..| . +..|+..........+..+.+|...|.+++|+|+ +.+|++++ ++.+++|++....
T Consensus 78 ~~~~l~~~~~dg--------~--v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 78 NNKIIAGALDNG--------S--LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp SSSCEEEEESSS--------C--EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred CCCeEEEEccCC--------e--EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 566666654332 2 4445544322222477888999999999999998 78888887 8888887655332
Q ss_pred ccceeecceeccceeeecccccCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcceEeeeecc------CCceeEEEEc
Q 015490 146 NTEIRRLGVKISEKVLSQLENVGQQLALTFDSE-GTIFAAGSENGNLRVFKWPSLEIILNESEA------HASVKDLSFS 218 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------~~~i~~~~~s 218 (406)
....... .........+...|.+++|+|+ +.+|++++.||.|++||+++++.+..+..+ ...|.+++|+
T Consensus 148 ~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 148 ESPSNYT----PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp SCTTTCC----CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred ccccccc----ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 1000000 0000111235578999999999 789999999999999999999888777766 5689999999
Q ss_pred cCC-CEEEEEeCCC---CEEEEEcCCC-eeeeecccCCcceEEEEEEEc-CCCCceEEEEEEEcCCCcEEEEEeCCCceE
Q 015490 219 PDG-KFLVSLGNRG---PGRVWDLASS-AVATPLAKENDELFASCRFSP-LNNEDYVLYIAAITDRGASIVTWNTTTWKR 292 (406)
Q Consensus 219 ~~~-~~l~s~s~d~---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~ 292 (406)
|++ .++++++.|+ .|++||++++ .....+...+...+.+++|+| ++. ++++++.|+.|++||+++++.
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~------~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH------LLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS------CEEEEESSSEEEEECSSSCCE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC------eEEEEeCCCCEEEeeCCCCcc
Confidence 997 6899999998 9999999986 455555524566799999999 665 356667899999999999999
Q ss_pred EEEeeecCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCceEEEEee--------------------------------
Q 015490 293 IRTKQVVREPVSSFNVSADG-KLLAVGTASGDISIIDSSSLQVRTAVK-------------------------------- 339 (406)
Q Consensus 293 ~~~~~~~~~~i~~~~~sp~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------------- 339 (406)
+..+..|...|.+++|+|++ ++|++++.|+.|++||+.+........
T Consensus 298 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (416)
T 2pm9_A 298 LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQ 377 (416)
T ss_dssp EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCC
T ss_pred ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccccc
Confidence 99999999999999999999 899999999999999998765322210
Q ss_pred --cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 340 --KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 340 --~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
..|..++.+++|+|+|++|++++.|+.|+||++.+.
T Consensus 378 ~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 378 APTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 015677889999999999999999999999999875
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-35 Score=291.25 Aligned_cols=260 Identities=20% Similarity=0.228 Sum_probs=216.4
Q ss_pred ceeEEecCCCCceEEEEccCC-CeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 105 PVAELRTDSDLPYRMAIHPHG-DGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~-~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
....+++|.+.|++++|+|++ ++|++++ |+.+++|++...... .......+. |...|.+++|+|++++
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---------~~~~~~~~~~h~~~v~~v~~s~~g~~ 444 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---------YGVAQRRLTGHSHFVEDVVLSSDGQF 444 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---------SCEEEEEEECCSSCEEEEEECTTSSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---------cccccceecCCCCcEEEEEECCCCCE
Confidence 345689999999999999976 5777777 899999887643211 111222333 4588999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc--cCCcceEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA--KENDELFASCR 259 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~ 259 (406)
|++|+.||+|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||........... ..+...+.+++
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999986654433222 24556799999
Q ss_pred EEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 260 FSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
|+|++.. ..+++++.|+.|++||+++.+....+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 525 ~~~~~~~----~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 525 FSPNTLQ----PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp ECSCSSS----CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EeCCCCc----ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 9998742 145677889999999999999999999999999999999999999999999999999999999888774
Q ss_pred cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 340 KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 340 ~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
+...|.+++|+|++.+|++++ |+.|++||+++++.+..
T Consensus 601 --~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~ 638 (694)
T 3dm0_A 601 --ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVED 638 (694)
T ss_dssp --CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred --CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhh
Confidence 567899999999998777665 56799999998876543
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.1e-35 Score=268.75 Aligned_cols=270 Identities=15% Similarity=0.207 Sum_probs=206.0
Q ss_pred cEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEeccccc
Q 015490 70 YYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENT 147 (406)
Q Consensus 70 ~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~ 147 (406)
+++++++..| .+..|+...... .......+|...|.+++|+| ++.+|++++ ++.+++|++.. .
T Consensus 87 ~~l~s~~~dg----------~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG----------DIILWDYDVQNK--TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG---S 151 (383)
T ss_dssp TEEEEEEBTS----------CEEEEETTSTTC--EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS---C
T ss_pred CEEEEEcCCC----------eEEEEeCCCccc--ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---C
Confidence 5666664433 344555544221 12223347999999999999 678888887 88888877652 1
Q ss_pred ceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEE
Q 015490 148 EIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVS 226 (406)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s 226 (406)
....+ .....+...|.+++|+|++++|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +|++
T Consensus 152 ~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 152 VIQVF--------AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEEE--------ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred ceEEE--------eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 11111 111123367999999999999999999999999998 5777888888888999999999999 9999
Q ss_pred EeCCCCEEEEEcCC----CeeeeecccCCcceEEEEEEEc-CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-
Q 015490 227 LGNRGPGRVWDLAS----SAVATPLAKENDELFASCRFSP-LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR- 300 (406)
Q Consensus 227 ~s~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 300 (406)
++.|+.|++||+++ +.....+ .+...+.+++|+| ++.. +++++.|+.|++||+++++....+..|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~------l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTK------LLTTDQRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCE------EEEEESSSEEEEEETTBTTSCSEEEECCB
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCE------EEEEcCCCcEEEEECCCCccccccccccc
Confidence 99999999999987 5555555 3566799999999 8873 4566789999999999887766665442
Q ss_pred ----------------CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec-ccccceEEEEEcCCCCeEEEEEC
Q 015490 301 ----------------EPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYDSRALVSASM 363 (406)
Q Consensus 301 ----------------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~ 363 (406)
..+..++|+|++++ +++.|+.|++||+.+++.+..+.. .|...+..++|+|++++|++++
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s- 371 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM- 371 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-
T ss_pred cccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-
Confidence 23445666677666 667899999999999999888862 2567788889999999999997
Q ss_pred CCcEEEEEecC
Q 015490 364 DSSVRVTVIED 374 (406)
Q Consensus 364 dg~i~iw~~~~ 374 (406)
|+.|++||+++
T Consensus 372 d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 GFNILIWNRED 382 (383)
T ss_dssp TTEEEEEECC-
T ss_pred CCcEEEEecCC
Confidence 99999999975
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-36 Score=276.31 Aligned_cols=274 Identities=14% Similarity=0.142 Sum_probs=201.9
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++.. +.+.++..+... .+.+..+.+|...|.+++|+|++++|++++ |+.+++|++....
T Consensus 22 ~g~~l~~~~~d--------~~i~iw~~~~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~- 88 (377)
T 3dwl_C 22 QRTEFVTTTAT--------NQVELYEQDGNG----WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG- 88 (377)
T ss_dssp SSSEEECCCSS--------SCBCEEEEETTE----EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------
T ss_pred CCCEEEEecCC--------CEEEEEEccCCc----eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-
Confidence 56666554332 234555554321 146677889999999999999999999998 8999998876432
Q ss_pred cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcce---Eeeeec-cCCceeEEEEccCCC
Q 015490 147 TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEI---ILNESE-AHASVKDLSFSPDGK 222 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~---~~~~~~-~~~~i~~~~~s~~~~ 222 (406)
. .........+...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |...|.+++|+|+++
T Consensus 89 -~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 89 -T--------WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp -C--------CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred -c--------eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 0 001122234568899999999999999999999999999988763 556666 777999999999999
Q ss_pred EEEEEeCCCCEEEEEcC------------------CCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEE
Q 015490 223 FLVSLGNRGPGRVWDLA------------------SSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVT 284 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 284 (406)
+|++++.|+.|++||++ .++....+ .+...+.+++|+|+++. +++++.|+.|++
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~------l~~~~~d~~i~i 231 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNA------LAYAGHDSSVTI 231 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSC------EEEEETTTEEC-
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCE------EEEEeCCCcEEE
Confidence 99999999999999985 24455555 55667999999999984 456678999999
Q ss_pred EeCCCceE----EEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce---------------------------
Q 015490 285 WNTTTWKR----IRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ--------------------------- 333 (406)
Q Consensus 285 ~d~~~~~~----~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--------------------------- 333 (406)
||+++++. +..+..|...|.+++|+|++++|++++.++.+ +|+.....
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (377)
T 3dwl_C 232 AYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGRE 310 (377)
T ss_dssp CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCC
T ss_pred EECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccc
Confidence 99999877 77888899999999999999999998766655 67654211
Q ss_pred ------------EEE------------EeecccccceEEEEEcCCC-C---eEEEEECCCcEEEEEe
Q 015490 334 ------------VRT------------AVKKAHLGIVTALAFSYDS-R---ALVSASMDSSVRVTVI 372 (406)
Q Consensus 334 ------------~~~------------~~~~~~~~~v~~~~~sp~~-~---~l~s~s~dg~i~iw~~ 372 (406)
... .+...|...|+++++.+.. . .|+||+.||.|++||+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 311 EEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp C-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 0112389999999977654 3 5999999999999985
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-34 Score=263.29 Aligned_cols=246 Identities=10% Similarity=0.029 Sum_probs=209.5
Q ss_pred EecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEee
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGS 186 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~ 186 (406)
+..|.+.|++++|+|++++|++++ ++.+++|+.+.... +....+. |...|.+++|+|++++|++++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------------VQVHELKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------------EEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------------EeeeeecCCCCcccEEEEeCCCCEEEEEc
Confidence 556999999999999999999986 88888887764211 1223333 558899999999999999999
Q ss_pred CCCeEEEEeCCCcceEee--eeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee---eeecccCCcceEEEEEEE
Q 015490 187 ENGNLRVFKWPSLEIILN--ESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV---ATPLAKENDELFASCRFS 261 (406)
Q Consensus 187 ~dg~i~vwd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~ 261 (406)
.||.|++||+++++.... +..+...|.+++|+|++++|++++.|+.|++||++.+.. ...+...+...+.+++|+
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 999999999988864433 355677999999999999999999999999999988763 344444556779999999
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeC------------------CCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCc
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNT------------------TTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGD 323 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~------------------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~ 323 (406)
|+++. +++++.++.|++||+ ..++.+..+..|...+.+++|+|++++|++++.|+.
T Consensus 152 ~~~~~------l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 152 PNSVL------LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp TTSSE------EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE
T ss_pred CCCCE------EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE
Confidence 99873 456678999999995 467888888889999999999999999999999999
Q ss_pred EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 324 ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
|++||+++++.+..+. .|..+|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 226 i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 226 VCLADADKKMAVATLA-SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEGGGTTEEEEEE-CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEECCCCceeEEEc-cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999998886 899999999999999988877 999999999988
No 57
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-35 Score=276.15 Aligned_cols=266 Identities=14% Similarity=0.165 Sum_probs=202.9
Q ss_pred EEEEecCCCCccccceeEEecCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccC
Q 015490 91 LSHFDFASNSLSDQPVAELRTDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
+..|+..... ......+.+|.+.|++++|+| ++.+|++++ |+++++|++.... ... .........
T Consensus 144 i~lWd~~~~~--~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~---~~~--------~~~~~~~~~ 210 (435)
T 4e54_B 144 IMLWNFGIKD--KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI---LRV--------FASSDTINI 210 (435)
T ss_dssp EEEECSSCCS--CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE---EEE--------EECCSSCSC
T ss_pred EEEEECCCCC--ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc---eeE--------EeccCCCCc
Confidence 4555554322 234556779999999999998 678888887 9999998764321 110 001111224
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEEEeCCCCEEEEEcCCCeeeeec
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVSLGNRGPGRVWDLASSAVATPL 247 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~ 247 (406)
.+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+++|+|++. +|++++.|+.|++||+++.+....+
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 578899999999999999999999999864 55667788888999999999876 7889999999999999887655443
Q ss_pred c--cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCC------CeEEEEEcCCCCEEEEEe
Q 015490 248 A--KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVRE------PVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 248 ~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~i~~~~~sp~~~~l~~~~ 319 (406)
. ..+...|.+++|+|++.. +++++.|+.|++||+.+++....+..|.. .+....|+|++.+++++.
T Consensus 290 ~~~~~h~~~v~~~~~spdg~~------l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 290 LYSLPHRHPVNAACFSPDGAR------LLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp SBCCBCSSCEEECCBCTTSSE------EEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC
T ss_pred EEeeeccccccceeECCCCCe------eEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEE
Confidence 2 245667999999999983 56677899999999999888777765532 234567788877777764
Q ss_pred C------------CCcEEEEECCCceEEEEeecccccceEEE-EEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 320 A------------SGDISIIDSSSLQVRTAVKKAHLGIVTAL-AFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 320 ~------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
. ++.|++||..+++.+..+..+|...|.++ +|+|+|++|++|+ |++|+||++++++.
T Consensus 364 ~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 364 YPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred cCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 3 35799999999999988866788889887 6999999999876 88999999998875
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-34 Score=259.47 Aligned_cols=252 Identities=12% Similarity=0.183 Sum_probs=214.3
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIF 182 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l 182 (406)
....+.+|.+.|++++|+|++++|++++ ++.+++|++. +++ .+..+. |...|.+++|+|++++|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~--~~~------------~~~~~~~h~~~v~~~~~~~~~~~l 89 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL--NGE------------RLGTLDGHTGTIWSIDVDCFTKYC 89 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT--TCC------------EEEEECCCSSCEEEEEECTTSSEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC--Cch------------hhhhhhhcCCcEEEEEEcCCCCEE
Confidence 4567899999999999999999999987 8888887654 222 233333 55889999999999999
Q ss_pred EEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC-----CCEEEEEcCCCeeee-----------e
Q 015490 183 AAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVWDLASSAVAT-----------P 246 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~~~~~-----------~ 246 (406)
++++.||.|++||+.+++....+. +...|.+++|+|+++++++++.+ +.|++||+....... .
T Consensus 90 ~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 90 VTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 999999999999999999887776 66789999999999999999998 999999997654221 1
Q ss_pred cccC-CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcE
Q 015490 247 LAKE-NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDI 324 (406)
Q Consensus 247 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i 324 (406)
+..+ ....+.+++|+|+++. +++++.++.|++||+++ .+.+..+..|...|.+++|+|++++|++++.|+.|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~------l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 242 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKY------IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS 242 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCE------EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCcCccceeEEEEcCCCCE------EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence 1111 1126889999999883 45567899999999998 78888999999999999999999999999999999
Q ss_pred EEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC--------------cEEEEEecCCcCCC
Q 015490 325 SIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS--------------SVRVTVIEDKKKSG 379 (406)
Q Consensus 325 ~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg--------------~i~iw~~~~~~~~~ 379 (406)
++||+++++.+..+. +...+..++|+|+++++++++.++ .+++||+.+++.+.
T Consensus 243 ~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 309 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG 309 (369)
T ss_dssp EEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE
T ss_pred EEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh
Confidence 999999999998885 788999999999999999999988 89999998877654
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.5e-36 Score=272.96 Aligned_cols=245 Identities=13% Similarity=0.054 Sum_probs=196.5
Q ss_pred EEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEe
Q 015490 108 ELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAG 185 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~ 185 (406)
.+..|.+.|++++|+|++++|++++ ++.++||+.+.... +....+. |...|.+++|+|++++|+++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 73 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW------------KHARTFSDHDKIVTCVDWAPKSNRIVTC 73 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE------------EECCCBCCCSSCEEEEEECTTTCCEEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce------------EEEEEEecCCceEEEEEEeCCCCEEEEE
Confidence 4555788999999999999999986 99999998874210 2333343 45889999999999999999
Q ss_pred eCCCeEEEEeCCCcc---eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee---eeecccCCcceEEEEE
Q 015490 186 SENGNLRVFKWPSLE---IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV---ATPLAKENDELFASCR 259 (406)
Q Consensus 186 ~~dg~i~vwd~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~ 259 (406)
+.|++|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+...+...+.+++
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 999999999998877 5666777888999999999999999999999999999998873 5566654677899999
Q ss_pred EEcCCCCceEEEEEEEcCCCcEEEEEeCC------------------CceEEEEeeecCCCeEEEEEcCCCCEEEEEeCC
Q 015490 260 FSPLNNEDYVLYIAAITDRGASIVTWNTT------------------TWKRIRTKQVVREPVSSFNVSADGKLLAVGTAS 321 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~i~~~d~~------------------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d 321 (406)
|+|+++ .+++++.|+.|++||++ .++.+..+ .|...|.+++|+|++++|++++.|
T Consensus 154 ~~~~~~------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 154 WHPNNV------LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp ECTTSS------EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT
T ss_pred EcCCCC------EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC
Confidence 999987 35666789999999985 35566666 788999999999999999999999
Q ss_pred CcEEEEECCCceE----EEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 322 GDISIIDSSSLQV----RTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 322 g~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
|.|++||+.+++. +..+. +|...|.+++|+|++++|++++.|+.+ +|+..
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 227 SSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999999998876 66665 899999999999999999988766655 77665
No 60
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.3e-34 Score=265.55 Aligned_cols=259 Identities=11% Similarity=0.152 Sum_probs=205.7
Q ss_pred eeEEecCCCCceEEEEccC-CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCC-E
Q 015490 106 VAELRTDSDLPYRMAIHPH-GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGT-I 181 (406)
Q Consensus 106 ~~~~~~h~~~v~~~~~sp~-~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~-~ 181 (406)
......|.+.|++++|+|+ +.++++++ ++.+++|++......... . ........+. |...+.+++|+|++. +
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~--~--~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP--S--GECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT--T--CCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc--c--ccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 3556789999999999998 56677766 888888877542111000 0 0112222333 457899999999998 9
Q ss_pred EEEeeCCCeEEEEeCCCcce-------EeeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCC---eeeeecccC
Q 015490 182 FAAGSENGNLRVFKWPSLEI-------ILNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASS---AVATPLAKE 250 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~-------~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~ 250 (406)
|++|+.||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +....+. .
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~ 275 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-A 275 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-C
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-c
Confidence 99999999999999987322 334556777999999999 6789999999999999999987 3444554 3
Q ss_pred CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceEEEEeeecCCCeEEEEEcCCCC-EEEEEeCCCcEEEEE
Q 015490 251 NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKRIRTKQVVREPVSSFNVSADGK-LLAVGTASGDISIID 328 (406)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~dg~i~i~d 328 (406)
+...+.+++|+|++.. ++++++.++.|++||+++ ...+..+..|...|.+++|+|+++ +|++++.|+.|++||
T Consensus 276 ~~~~v~~i~~~p~~~~-----~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEF-----ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp CSSCEEEEEECSSCTT-----EEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred CCCCeEEEEeCCCCCC-----EEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 4567999999999986 567778899999999998 566788888999999999999985 799999999999999
Q ss_pred CCC--------------ceEEEEeecccccceEEEEEcCCCC-eEEEEECCCcEEEEEecCC
Q 015490 329 SSS--------------LQVRTAVKKAHLGIVTALAFSYDSR-ALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 329 ~~~--------------~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s~dg~i~iw~~~~~ 375 (406)
+.. .+.+..+. +|...|++++|+|+++ +|++++.||.|++|++.+.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECC-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCccccCccccccCCcceEEEcC-CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 986 24555554 7999999999999999 8999999999999999754
No 61
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=246.53 Aligned_cols=264 Identities=17% Similarity=0.216 Sum_probs=210.1
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccccc-
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV- 167 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (406)
.+..|+.++... .....+.+|...|++++|+|+++++++|+ |+.+++|++. +++ .+..+..+
T Consensus 46 tV~iWd~~tg~~--~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~--~~~------------~~~~~~~h~ 109 (318)
T 4ggc_A 46 SVYLWSASSGDI--LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ--QQK------------RLRNMTSHS 109 (318)
T ss_dssp EEEEEETTTCCE--EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT--TTE------------EEEEEECCS
T ss_pred EEEEEECCCCCE--EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC--Cce------------eEEEecCcc
Confidence 466677665321 12234457888999999999999999998 8888887654 222 23333333
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeee
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE-IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATP 246 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 246 (406)
..+.+ +++++..+++++.++.+++|+..... ....+..|...+..+.+++++++|++++.|+.|++||+++++....
T Consensus 110 ~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 110 ARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 187 (318)
T ss_dssp SCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred ceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence 45554 45567899999999999999987664 4455667778999999999999999999999999999988764322
Q ss_pred c---ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe--CC
Q 015490 247 L---AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT--AS 321 (406)
Q Consensus 247 ~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d 321 (406)
. ...+...+..+.++|.+.. ++.+++++.++.|++||.+......... +...+..+.|+|+++.+++++ .|
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSN---VLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTT---EEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTT
T ss_pred ceeeecccCCceEEEEecCCCCc---EEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCC
Confidence 2 2234456889999999886 4556788899999999999887766554 557799999999999888765 69
Q ss_pred CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 322 GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 322 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+.|++||+++++.+..+. +|.+.|++++|+|+|++|+||+.||+|+|||+.+..
T Consensus 264 ~~i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999996 899999999999999999999999999999997654
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-34 Score=290.37 Aligned_cols=254 Identities=13% Similarity=0.205 Sum_probs=219.5
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
.....+.+|.+.|.+++|+|++++|++++ ++.++||++. ++. .+..+. +...|.+++|+|++++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~--~~~------------~~~~~~~~~~~v~~~~~s~~~~~ 69 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE--TQV------------EVRSIQVTETPVRAGKFIARKNW 69 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT--TTE------------EEEEEECCSSCEEEEEEEGGGTE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC--CCc------------eEEEEecCCCcEEEEEEeCCCCE
Confidence 46678999999999999999999999998 7777777654 222 223333 5588999999999999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC-eeeeecccCCcceEEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS-AVATPLAKENDELFASCRF 260 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~ 260 (406)
|++|+.||.|++||+.+++.+..+..|...|++++|+|++++|++++.|+.|++||+.++ .....+. .+...+.+++|
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~ 148 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAF 148 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEE
Confidence 999999999999999999999999889899999999999999999999999999999887 4444444 44567899999
Q ss_pred Ec-CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-CCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 261 SP-LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-EPVSSFNVSA--DGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 261 ~~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
+| ++. .+++++.++.|++||+.+++....+..+. ..+.+++|+| ++.+|++++.||.|++||+.+++.+.
T Consensus 149 ~p~~~~------~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 149 NPKDPS------TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp ETTEEE------EEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred EcCCCC------EEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 99 554 45666789999999998887777766554 7899999999 99999999999999999999999988
Q ss_pred EeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 337 AVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 337 ~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
.+. +|...|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 223 ~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 223 TLE-GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp EEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEc-CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 886 899999999999999999999999999999999876543
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.3e-35 Score=268.11 Aligned_cols=260 Identities=15% Similarity=0.158 Sum_probs=214.3
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecc-cccCcEEEEEECCC----
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL-ENVGQQLALTFDSE---- 178 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~---- 178 (406)
....+.+|.+.|++++|+| ++|++++ |+.+++|+++...... .......+ .+...|.+++|+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN--------PKDKSYSHFVHKSGLHHVDVLQAIERD 77 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCC--------GGGGEEEEECCTTCEEEEEEEEEEETT
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccccc--------CCCcceEEecCCCcEEEEEEecccccC
Confidence 4556789999999999999 7888877 8888887766432110 01112222 35588999999999
Q ss_pred C---CEEEEeeCCCeEEEEeCCCcce-----Eeeeecc-----CCceeEEEEc----cCCCE-EEEEeCCCCEEEEEcCC
Q 015490 179 G---TIFAAGSENGNLRVFKWPSLEI-----ILNESEA-----HASVKDLSFS----PDGKF-LVSLGNRGPGRVWDLAS 240 (406)
Q Consensus 179 g---~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~i~~~~~s----~~~~~-l~s~s~d~~i~iwd~~~ 240 (406)
+ ++|++++.||.|++||+.+++. ...+..+ ...|.+++|+ |++++ |++++.|+.|++||+++
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 9 9999999999999999988876 6677777 4799999999 99999 99999999999999988
Q ss_pred ------Ceeee-----ecc------cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee---c-
Q 015490 241 ------SAVAT-----PLA------KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV---V- 299 (406)
Q Consensus 241 ------~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~- 299 (406)
++.+. .+. ..+...+.+++|+|++ . +++++.++.|++||+++++.+..+.. |
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~------l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~ 230 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L------IATGFNNGTVQISELSTLRPLYNFESQHSMI 230 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E------EEEECTTSEEEEEETTTTEEEEEEECCC---
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e------EEEEeCCCcEEEEECCCCceeEEEecccccc
Confidence 55554 442 2345668899999988 5 45667899999999999999999998 8
Q ss_pred --CCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCceEEEEeecc-------------cccceEEEEEcCCCCeEEEE
Q 015490 300 --REPVSSFNVSADGKLLAVGTAS---GDISIIDSSSLQVRTAVKKA-------------HLGIVTALAFSYDSRALVSA 361 (406)
Q Consensus 300 --~~~i~~~~~sp~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~sp~~~~l~s~ 361 (406)
...+.+++|+|++++|++++.| +.|++||+++++.+..+. . |...|.+++|+|++++|+++
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEEEEECCCCCEEEEE
Confidence 8999999999999999999999 999999999999988886 6 99999999999999999999
Q ss_pred ECCCcEEEEEecCCcCCCCch
Q 015490 362 SMDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 362 s~dg~i~iw~~~~~~~~~~~~ 382 (406)
+.||.|++||+++++.+..+.
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEE
T ss_pred eCCCeEEEEEcCCCceeEEEe
Confidence 999999999999887655443
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=260.49 Aligned_cols=271 Identities=15% Similarity=0.106 Sum_probs=210.3
Q ss_pred cceeEEecCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECC-CCC
Q 015490 104 QPVAELRTDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDS-EGT 180 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~ 180 (406)
+....+.+|.+.|++++|+| ++++|++++ ++.+++|+++.......................+...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 35667788999999999999 999999998 888999877643222111100000000000012558899999999 778
Q ss_pred EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccC---CCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEE
Q 015490 181 IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPD---GKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFAS 257 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 257 (406)
+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.|+.|++||+++++....+..+ ...+.+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~v~~ 191 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH-RQEILA 191 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC-CSCEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC-CCcEEE
Confidence 99999999999999999988776654 5668999999884 459999999999999999999888877754 456899
Q ss_pred EEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce-EEEEe---------------eecCCCeEEEEEcCCCCEEEEEeCC
Q 015490 258 CRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK-RIRTK---------------QVVREPVSSFNVSADGKLLAVGTAS 321 (406)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~-~~~~~---------------~~~~~~i~~~~~sp~~~~l~~~~~d 321 (406)
++|+|+++. ++++++.++.|++||+++.. .+..+ ..|...|.+++|+|++++|++++.|
T Consensus 192 ~~~~~~~~~-----ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 192 VSWSPRYDY-----ILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp EEECSSCTT-----EEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCc-----EEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 999999986 56677889999999998765 33333 4577889999999999999999999
Q ss_pred CcEEEEECCCce-----------------------------------------------EEEEeecccccceEEEEEcCC
Q 015490 322 GDISIIDSSSLQ-----------------------------------------------VRTAVKKAHLGIVTALAFSYD 354 (406)
Q Consensus 322 g~i~i~d~~~~~-----------------------------------------------~~~~~~~~~~~~v~~~~~sp~ 354 (406)
|.|++||+.+++ .+..+. +|...|.+++|+|+
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~ 345 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK-GHYKTVDCCVFQSN 345 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC-CCSSCEEEEEEETT
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec-cCCCeEEEEEEcCC
Confidence 999999987643 334443 78999999999999
Q ss_pred CCeEEEEECCCcEEEEEecCCcCCCCch
Q 015490 355 SRALVSASMDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 355 ~~~l~s~s~dg~i~iw~~~~~~~~~~~~ 382 (406)
+++|++++.||.|++|++++++.+...+
T Consensus 346 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 346 FQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp TTEEEEEETTSCEEEEEECC--------
T ss_pred CCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 9999999999999999999988765543
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-34 Score=266.78 Aligned_cols=254 Identities=13% Similarity=0.192 Sum_probs=204.9
Q ss_pred cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecc-cccceeecceeccceeeecc---c--ccCcEEEEE--ECCCCCE
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEV-ENTEIRRLGVKISEKVLSQL---E--NVGQQLALT--FDSEGTI 181 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~---~--~~~~v~~~~--~s~~g~~ 181 (406)
+|...|.+++|+|++.+|++++ |+.+++|+++.. .+........ ..+..+ . +...+.++. +++++.+
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC----ECIRKINLKNFGKNEYAVRMRAFVNEEKSL 184 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE----EEEEEEEGGGGSSCCCEEEEEEEECSSCEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc----ceeEEEEccCcccccCceEEEEEEcCCCCE
Confidence 5999999999999999999988 899999988633 2222222211 122221 1 456677777 6789999
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeec--cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESE--AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCR 259 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 259 (406)
|++|+.|+.|++||+++++.+..+.. |...|++++|+|++++|++++.|+.|++||+++++.+..+...+...+.+++
T Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVE 264 (437)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEE
Confidence 99999999999999999999888887 6779999999999999999999999999999999998887655566899997
Q ss_pred EEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec--------------------------CCCeEEEEEcCCCC
Q 015490 260 FSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV--------------------------REPVSSFNVSADGK 313 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--------------------------~~~i~~~~~sp~~~ 313 (406)
|+|.-.... ..+++++.|+.|++||+++++.+..+..| ...|.+++|+ +++
T Consensus 265 ~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 265 VCQFYGKNS--VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp ECTTTCTTE--EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred eccccCCCc--cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 776422111 14567789999999999999988887754 3347788888 778
Q ss_pred EEEEEeCCCcEEEEECCCceEEEEeec------------------------------------ccccceEEEEEcCC--C
Q 015490 314 LLAVGTASGDISIIDSSSLQVRTAVKK------------------------------------AHLGIVTALAFSYD--S 355 (406)
Q Consensus 314 ~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------------------------~~~~~v~~~~~sp~--~ 355 (406)
+|++|+.|+.|++||+.+++....+.. .|...|++++|+++ +
T Consensus 342 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~ 421 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDET 421 (437)
T ss_dssp EEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSS
T ss_pred EEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCc
Confidence 999999999999999998876665541 18899999999998 7
Q ss_pred CeEEEEECCCcEEEEE
Q 015490 356 RALVSASMDSSVRVTV 371 (406)
Q Consensus 356 ~~l~s~s~dg~i~iw~ 371 (406)
.+|++|+.||.|+||+
T Consensus 422 ~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 422 PLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTSCEEEEC
T ss_pred eEEEEEcCCceEEEeC
Confidence 8999999999999995
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=263.13 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=210.6
Q ss_pred eEEecCCCCceEEEEccCCC-eEEEEe-cCCeEEEEEec--ccccc------eeecceeccceeeecccccCcEEEEEEC
Q 015490 107 AELRTDSDLPYRMAIHPHGD-GIICAL-QNSCRLFEWDE--VENTE------IRRLGVKISEKVLSQLENVGQQLALTFD 176 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~-~l~~~~-~~~~~i~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~s 176 (406)
.....|.+.|.+++|+|+++ +|++++ ++.+++|++.. .+++. ...+... .........+...|.+++|+
T Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHP-FALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECC-CCCC------CBCEEEEEEC
T ss_pred eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccc-ccccccccCCCCceEEEEEc
Confidence 34456779999999999999 999887 88899988721 11221 1111000 00000001134589999999
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc-------
Q 015490 177 SEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK------- 249 (406)
Q Consensus 177 ~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~------- 249 (406)
|++++|++++.||.|++|| .+++....+..|...|.+++|+|++++|++++.|+.|++||+.+++....+..
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 9999999999999999999 67778888888888999999999999999999999999999988766543321
Q ss_pred ------------------------------------------------CCcceEEEEEEEcCCCCceEEEEEEEcCCCcE
Q 015490 250 ------------------------------------------------ENDELFASCRFSPLNNEDYVLYIAAITDRGAS 281 (406)
Q Consensus 250 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 281 (406)
.+...+.+++|+|+++. +++++.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~------l~~~~~d~~ 270 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL------LLSASDDGT 270 (425)
T ss_dssp ---------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE------EEEEETTSC
T ss_pred eeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE------EEEEcCCCE
Confidence 23456889999999873 455678999
Q ss_pred EEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEE
Q 015490 282 IVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSA 361 (406)
Q Consensus 282 i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 361 (406)
|++||+++++.+..+..|...+.+++|+|++ ++++++.|+.|++||+.+++.+..+. .|...|.+++|+|++++|+++
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEE
Confidence 9999999999888888899999999999999 99999999999999999999998886 789999999999999999999
Q ss_pred ECCCcEEEEEecCCc
Q 015490 362 SMDSSVRVTVIEDKK 376 (406)
Q Consensus 362 s~dg~i~iw~~~~~~ 376 (406)
+.||.|++||+.+++
T Consensus 349 ~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 349 FMDGQVNVYDLKKLN 363 (425)
T ss_dssp ETTSCEEEEECHHHH
T ss_pred ECCCeEEEEECCCCc
Confidence 999999999998876
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-33 Score=284.49 Aligned_cols=275 Identities=14% Similarity=0.195 Sum_probs=230.0
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++..| .+..|+... ...+..+.+|...|.+++|+|++++|++++ ++.+++|++. ++
T Consensus 24 ~~~~la~~~~~g----------~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~--~~ 87 (814)
T 3mkq_A 24 TEPWVLTTLYSG----------RVEIWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN--TG 87 (814)
T ss_dssp SSSEEEEEETTS----------EEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT--TC
T ss_pred CCCEEEEEeCCC----------EEEEEECCC----CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC--CC
Confidence 677777765433 455666544 347788999999999999999999999998 7777776654 22
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc-ceEeeeeccCCceeEEEEcc-CCCE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSL-EIILNESEAHASVKDLSFSP-DGKF 223 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~s~-~~~~ 223 (406)
+ .+..+. |...|.+++|+|++++|++++.||.|++||++++ .....+..|...|.+++|+| +++.
T Consensus 88 ~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 88 E------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp C------------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred c------------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 2 222333 5588999999999999999999999999999887 56666777888999999999 8889
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEc--CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCC
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSP--LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVRE 301 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 301 (406)
|++++.|+.|++||+.+++....+..++...+.+++|+| ++. .+++++.++.|++||+++++.+..+..|..
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 229 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP------YMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC------EEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC------EEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 999999999999999988888777776667788999999 666 356678899999999999999999999999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCe-EEEEECCCcEEEEEecCCcC
Q 015490 302 PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRA-LVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~s~dg~i~iw~~~~~~~ 377 (406)
.|.+++|+|++++|++++.||.|++||+.+++....+. .|...+.+++|+|+++. +++++.|+.+.+|++.....
T Consensus 230 ~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 230 NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC-CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence 99999999999999999999999999999999988886 78899999999999874 35555677799999876543
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-34 Score=269.78 Aligned_cols=242 Identities=13% Similarity=0.104 Sum_probs=204.9
Q ss_pred CceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 115 LPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
.+++++|+|++++|++++ ++.+++|+.... .....+..+..+....|++++++|++|+.||.|++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 123 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIR--------------DGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKV 123 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSE--------------ETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccc--------------ceeeEEecCCceEEEEEecCCCEEEEEECCCCEEE
Confidence 456899999999999987 888888765532 12222334445566688999999999999999999
Q ss_pred EeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEE
Q 015490 194 FKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIA 273 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (406)
||+.+++....+..|...|++++|+|++++|++++.|+.|++||+++++....+.. +...+.+++|+|+++. +
T Consensus 124 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~------l 196 (420)
T 3vl1_A 124 LDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRN------V 196 (420)
T ss_dssp ECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTE------E
T ss_pred EeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCE------E
Confidence 99999988877778888999999999999999999999999999999988888765 4557899999999883 4
Q ss_pred EEcCCCcEEEEEeCCCceEEEEeeec---CCC---------------------eEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 015490 274 AITDRGASIVTWNTTTWKRIRTKQVV---REP---------------------VSSFNVSADGKLLAVGTASGDISIIDS 329 (406)
Q Consensus 274 ~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~---------------------i~~~~~sp~~~~l~~~~~dg~i~i~d~ 329 (406)
++++.|+.|++||+++++.+..+..+ ... +.+++|+|++++|++|+.||.|++||+
T Consensus 197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence 56778999999999999998888753 233 444556889999999999999999999
Q ss_pred CCceEEEEeecccccceEEEEEcCCCC-eEEEEECCCcEEEEEecCCcC
Q 015490 330 SSLQVRTAVKKAHLGIVTALAFSYDSR-ALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 330 ~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++++....+...|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 277 FSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 999988888667889999999999998 999999999999999998754
No 69
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-35 Score=271.92 Aligned_cols=263 Identities=14% Similarity=0.156 Sum_probs=212.4
Q ss_pred cceeEE-ecCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCC
Q 015490 104 QPVAEL-RTDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT 180 (406)
Q Consensus 104 ~~~~~~-~~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 180 (406)
+.+..+ .+|.+.|++++|+| ++.+|++++ |+.++||++....... .......+.|...|.+++|+|+++
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--------VYSSSLTYDCSSTVTQITMIPNFD 124 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--------CCSCSEEEECSSCEEEEEECTTSS
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--------ccceeeeccCCCCEEEEEEeCCCC
Confidence 567788 89999999999999 999999998 8889998765421111 011122334678999999999999
Q ss_pred EEEEeeCCCeEEEEeCC---CcceEeeeec------------cCCceeEEE--EccCCCEEEEEeCCCCEEEEEcCCCee
Q 015490 181 IFAAGSENGNLRVFKWP---SLEIILNESE------------AHASVKDLS--FSPDGKFLVSLGNRGPGRVWDLASSAV 243 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~---~~~~~~~~~~------------~~~~i~~~~--~s~~~~~l~s~s~d~~i~iwd~~~~~~ 243 (406)
+|++|+.||.|++||++ +++....... +...+.++. +++++++|++++.|+.|++||+++++.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 99999999999999994 4444332221 233566666 567899999999999999999999999
Q ss_pred eeecccC-CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-ecCCCeEEEEEc----CCCCEEEE
Q 015490 244 ATPLAKE-NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-VVREPVSSFNVS----ADGKLLAV 317 (406)
Q Consensus 244 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~i~~~~~s----p~~~~l~~ 317 (406)
+..+..+ +...+.+++|+|++. .+++++.|+.|++||+++++.+..+. .|...|.+++|+ |++++|++
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECC------VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSC------EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred eEEEccCCCCCceEEEEECCCCC------EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 8888764 566799999999987 45677889999999999999988886 566789999665 46889999
Q ss_pred EeCCCcEEEEECCCceEEEEeec-----------------------c--cccceEEEEEcCCCCeEEEEECCCcEEEEEe
Q 015490 318 GTASGDISIIDSSSLQVRTAVKK-----------------------A--HLGIVTALAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~~~-----------------------~--~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
|+.||.|++||+++++.+..+.. + |...|++++|+ ++++|++++.|+.|++||+
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 99999999999999988777651 1 66778999999 7789999999999999999
Q ss_pred cCCcCCCCc
Q 015490 373 EDKKKSGGL 381 (406)
Q Consensus 373 ~~~~~~~~~ 381 (406)
.+++.+..+
T Consensus 358 ~~~~~~~~~ 366 (437)
T 3gre_A 358 NELSSSKAV 366 (437)
T ss_dssp TCGGGCEEE
T ss_pred CCcccceEE
Confidence 998865443
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-34 Score=265.90 Aligned_cols=277 Identities=12% Similarity=0.134 Sum_probs=217.0
Q ss_pred cCCCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEe
Q 015490 64 DDIRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWD 142 (406)
Q Consensus 64 ~~~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~ 142 (406)
..+++++.+++++..| .+..|+... .+....+.+|.+.|++++|+|++++|++++ |+.+++|++.
T Consensus 104 ~~~~~~~~l~~~~~dg----------~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEG----------DIKVLDSNF----NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp EECSSSCEEEEEETTS----------CEEEECTTS----CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEecCCCEEEEEECCC----------CEEEEeCCC----cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 3455666776664433 345555543 235566689999999999999999999987 7878887654
Q ss_pred cccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccC------------
Q 015490 143 EVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAH------------ 209 (406)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------------ 209 (406)
. ++. +..+. |...|.+++|+|++++|++++.|+.|++||+++++....+..+.
T Consensus 170 ~--~~~------------~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 170 D--GSN------------PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp T--CCC------------CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred C--CcC------------ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 2 222 22233 55889999999999999999999999999999998887776432
Q ss_pred ------------CceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcC
Q 015490 210 ------------ASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITD 277 (406)
Q Consensus 210 ------------~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (406)
..+.+++|+|++++|++++.||.|++||+++++....+...+...+.+++|+|++.. ++++++
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~l~~g~ 310 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNAN-----YIYAGY 310 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTT-----EEEEEE
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCC-----EEEEEe
Confidence 344555668899999999999999999999999888887777778999999999985 456677
Q ss_pred CCcEEEEEeCCCceE-EEEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce---------EEEEeecccccce
Q 015490 278 RGASIVTWNTTTWKR-IRTKQV-VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ---------VRTAVKKAHLGIV 346 (406)
Q Consensus 278 ~~~~i~~~d~~~~~~-~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~v 346 (406)
.|+.|++||+++++. +..+.. +...+.++.+ +++++|++++.|+.|++||+.... ....+ ..|...|
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~-~~~~~~v 388 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFL-VSNDDAV 388 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEE-CCSSCCC
T ss_pred CCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEE-ccCCcce
Confidence 899999999998753 666666 5677887755 578899999999999999987631 11223 3688899
Q ss_pred EEEEEcCCCC---eEEEEECCCcEEEEEecCC
Q 015490 347 TALAFSYDSR---ALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 347 ~~~~~sp~~~---~l~s~s~dg~i~iw~~~~~ 375 (406)
.+++|+|+++ .+++++.+|.+.+|+++++
T Consensus 389 ~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 389 SQFCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp CEEEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred EEEEEccCCCCcceEEEEcCCceEEEEeccCC
Confidence 9999999999 7888889999999998763
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.4e-34 Score=258.01 Aligned_cols=252 Identities=13% Similarity=0.143 Sum_probs=203.1
Q ss_pred eEEecCCCCceEEEEccCCCeEEEEe-----cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---
Q 015490 107 AELRTDSDLPYRMAIHPHGDGIICAL-----QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE--- 178 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~~l~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--- 178 (406)
..+.+|.+.|.+++|+|++..+++++ ++.+++|+++. ++. .......+...|.+++|+|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~--~~~----------~~~~~~~~~~~v~~~~~~~~~~~ 79 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQH--GDL----------KLLREIEKAKPIKCGTFGATSLQ 79 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECS--SSE----------EEEEEEEESSCEEEEECTTCCTT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCC--Ccc----------cceeeecccCcEEEEEEcCCCCC
Confidence 34578999999999999998777655 56667766653 221 11223356789999999998
Q ss_pred CCEEEEeeCCCeEEEEeCCCcc-eEeeeeccCCceeEEEE------ccCCCEEEEEeCCCCEEEEEcCCCe-eeeecccC
Q 015490 179 GTIFAAGSENGNLRVFKWPSLE-IILNESEAHASVKDLSF------SPDGKFLVSLGNRGPGRVWDLASSA-VATPLAKE 250 (406)
Q Consensus 179 g~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~------s~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~ 250 (406)
+++|++|+.||.|++||+.+++ ....+..|...|.+++| +|++++|++++.|+.|++||+++++ ....+..+
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 6999999999999999999887 77778888889999954 6899999999999999999999876 55555433
Q ss_pred C---cceEEEEE----EEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcC---CCCEEEEEeC
Q 015490 251 N---DELFASCR----FSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSA---DGKLLAVGTA 320 (406)
Q Consensus 251 ~---~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp---~~~~l~~~~~ 320 (406)
. ...+.++. |+|++. .+++++.++.|++||+++++.... ..+...+.+++|+| ++++|++++.
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~------~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEER------VVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCC------EEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEES
T ss_pred CCCCCCceEEEEEEeccCCCCC------EEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECC
Confidence 2 33678888 667776 355667899999999999887544 56778999999999 9999999999
Q ss_pred CCcEEEEECCCceEEEEee----cccccceEEEEEcCCCC-eEEEEECCCcEEEEEecCCcC
Q 015490 321 SGDISIIDSSSLQVRTAVK----KAHLGIVTALAFSYDSR-ALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 321 dg~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~sp~~~-~l~s~s~dg~i~iw~~~~~~~ 377 (406)
||.|++||+++++....+. .+|...|.+++|+|+++ +|++++.||.|++||++++..
T Consensus 233 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 233 EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 9999999998766544332 27999999999999998 899999999999999987654
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.9e-34 Score=263.45 Aligned_cols=271 Identities=10% Similarity=0.100 Sum_probs=211.3
Q ss_pred EEEEecCCCCccccceeEEecCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-cc
Q 015490 91 LSHFDFASNSLSDQPVAELRTDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NV 167 (406)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (406)
+..|+..........+..+.+|.+.|++++|+| ++.+|++++ |+.++||++...... .. ....+..+. |.
T Consensus 59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~--~~-----~~~~~~~~~~h~ 131 (402)
T 2aq5_A 59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV--LP-----LREPVITLEGHT 131 (402)
T ss_dssp EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS--SC-----BCSCSEEEECCS
T ss_pred EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc--cc-----cCCceEEecCCC
Confidence 444554333222345667889999999999999 899999988 888888877643211 00 012223333 55
Q ss_pred CcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcceEeee--eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee
Q 015490 168 GQQLALTFDSEG-TIFAAGSENGNLRVFKWPSLEIILNE--SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA 244 (406)
Q Consensus 168 ~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~ 244 (406)
..|.+++|+|++ .+|++++.||.|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee
Confidence 889999999998 69999999999999999999988888 677889999999999999999999999999999999998
Q ss_pred eec-ccCCcceEEEEEEEcCCCCceEEEEEEEc---CCCcEEEEEeCCCceE-EEEee-ecCCCeEEEEEcCCCCEEEE-
Q 015490 245 TPL-AKENDELFASCRFSPLNNEDYVLYIAAIT---DRGASIVTWNTTTWKR-IRTKQ-VVREPVSSFNVSADGKLLAV- 317 (406)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~i~~~d~~~~~~-~~~~~-~~~~~i~~~~~sp~~~~l~~- 317 (406)
..+ ..+....+.++.|+|++. +++++ +.++.|++||+++++. +.... .+...+.+++|+|++++|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~------~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGK------ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTE------EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred eeeccCCCCCcceEEEEcCCCc------EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 888 555555578999999876 34444 6899999999998654 22222 35577999999999999975
Q ss_pred EeCCCcEEEEECCCceE-EEEee-cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 318 GTASGDISIIDSSSLQV-RTAVK-KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~-~~~~~-~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
|+.||.|++||+.+++. +..+. ..|...|.+++|+|++.++++ .++.+++|++.+++
T Consensus 286 g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 286 GKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp ETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred EcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 55799999999998773 33332 125689999999999998764 56799999998754
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.3e-34 Score=260.35 Aligned_cols=255 Identities=11% Similarity=0.075 Sum_probs=204.4
Q ss_pred cceeEEecCCCCceEEEEccCC-CeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECC-CCC
Q 015490 104 QPVAELRTDSDLPYRMAIHPHG-DGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDS-EGT 180 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~-~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~ 180 (406)
.....+.+|.+.|.+++|+|++ ++|++++ ++.++||++... .... .+....+...|.+++|+| +++
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~---------~~~~~~h~~~v~~~~~~~~~~~ 132 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ--NKTS---------FIQGMGPGDAITGMKFNQFNTN 132 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST--TCEE---------EECCCSTTCBEEEEEEETTEEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc--ccce---------eeecCCcCCceeEEEeCCCCCC
Confidence 4566889999999999999999 8888887 888899876532 1111 111123668999999999 779
Q ss_pred EEEEeeCCCeEEEEeCCCcceEeeeeccC---CceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEE
Q 015490 181 IFAAGSENGNLRVFKWPSLEIILNESEAH---ASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFAS 257 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 257 (406)
+|++++.|+.|++||+++ .....+..+. ..|.+++|+|++++|++++.|+.|++||+ +++....+..+ ...+.+
T Consensus 133 ~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h-~~~v~~ 209 (383)
T 3ei3_B 133 QLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLH-KAKVTH 209 (383)
T ss_dssp EEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECS-SSCEEE
T ss_pred EEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccC-CCcEEE
Confidence 999999999999999986 4444554444 57999999999999999999999999999 56677766654 457899
Q ss_pred EEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC----ceEEEEeeecCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCc
Q 015490 258 CRFSPLNNEDYVLYIAAITDRGASIVTWNTTT----WKRIRTKQVVREPVSSFNVSA-DGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
++|+|+++. ++++++.|+.|++||+++ +..+..+ .|...|.+++|+| ++++|++++.|+.|++||++++
T Consensus 210 ~~~~~~~~~-----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 210 AEFNPRCDW-----LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEECSSCTT-----EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEECCCCCC-----EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 999999985 456778899999999998 5666666 6889999999999 9999999999999999999987
Q ss_pred eEEEEeecccc-----------------cceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 333 QVRTAVKKAHL-----------------GIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 333 ~~~~~~~~~~~-----------------~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
+....+. .|. +.+..++|+|++++ +++.|+.|++||+.+++.+..+
T Consensus 284 ~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 284 SKPDQII-IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp TSCSEEE-ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred ccccccc-cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 7665554 332 23445667777766 7789999999999988765443
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=255.80 Aligned_cols=258 Identities=14% Similarity=0.116 Sum_probs=205.6
Q ss_pred cccceeEEecCCCCceEEEEccC---CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecc-cccCcEEEEEEC
Q 015490 102 SDQPVAELRTDSDLPYRMAIHPH---GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL-ENVGQQLALTFD 176 (406)
Q Consensus 102 ~~~~~~~~~~h~~~v~~~~~sp~---~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s 176 (406)
+...+..+.+|.+.|++++|+|+ |.+|++++ ++.+++|+++..... ....+ .|...|.+++|+
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~------------~~~~~~~h~~~v~~~~~~ 95 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT------------IPKAQQMHTGPVLDVCWS 95 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE------------EEEEEEECSSCEEEEEEC
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce------------eEEEeccccCCEEEEEEC
Confidence 34677788999999999999999 58888887 888899887642111 11222 355889999999
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEE--ccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCC---
Q 015490 177 SEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSF--SPDGKFLVSLGNRGPGRVWDLASSAVATPLAKEN--- 251 (406)
Q Consensus 177 ~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~--- 251 (406)
|++++|++++.||.|++||+++++... +..|...|.+++| ++++++|++++.|+.|++||+++++....+..+.
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 999999999999999999999888765 5667889999999 8999999999999999999999887665554322
Q ss_pred -------------------------------------cceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc---e
Q 015490 252 -------------------------------------DELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW---K 291 (406)
Q Consensus 252 -------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~---~ 291 (406)
.....++.+.++...... .+++++.++.|++||++.. .
T Consensus 175 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dg~i~i~~~~~~~~~~ 252 (368)
T 3mmy_A 175 CADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPT--GFALGSIEGRVAIHYINPPNPAK 252 (368)
T ss_dssp EEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEE--EEEEEETTSEEEEEESSCSCHHH
T ss_pred EEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCC--eEEEecCCCcEEEEecCCCCccc
Confidence 112233444443332111 2566788999999999876 4
Q ss_pred EEEEeeecCC------------CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEE
Q 015490 292 RIRTKQVVRE------------PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALV 359 (406)
Q Consensus 292 ~~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 359 (406)
....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+. .|..+|.+++|+|+|++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE-QLDQPISACCFNHNGNIFA 331 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCSSCEEEEEECTTSSCEE
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec-CCCCCceEEEECCCCCeEE
Confidence 5566666654 69999999999999999999999999999999999886 8999999999999999999
Q ss_pred EEECCCcEEEEEecCC
Q 015490 360 SASMDSSVRVTVIEDK 375 (406)
Q Consensus 360 s~s~dg~i~iw~~~~~ 375 (406)
+++.|+..+.|++.+.
T Consensus 332 ~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 332 YASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEECCCSTTCGGGCCT
T ss_pred EEecccccccccccCC
Confidence 9999986666655443
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=259.26 Aligned_cols=289 Identities=11% Similarity=0.151 Sum_probs=208.9
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCC-----CccccceeEEecCC------------CCceEEEEccCC--CeE
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASN-----SLSDQPVAELRTDS------------DLPYRMAIHPHG--DGI 128 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~h~------------~~v~~~~~sp~~--~~l 128 (406)
+++++++++..| .+.++.+..... .........+.+|. +.|.+++|+|++ ..+
T Consensus 39 ~g~~la~g~~dg--------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 39 SGELLATGDKGG--------RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp SSSEEEEEETTS--------EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred CCCEEEEEcCCC--------eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceE
Confidence 677777765433 345555443221 11123577889998 899999999998 678
Q ss_pred EEEe-cCCeEEEEEecccccce-----------------eeccee--------ccceeeec--ccccCcEEEEEECCCCC
Q 015490 129 ICAL-QNSCRLFEWDEVENTEI-----------------RRLGVK--------ISEKVLSQ--LENVGQQLALTFDSEGT 180 (406)
Q Consensus 129 ~~~~-~~~~~i~~~~~~~~~~~-----------------~~~~~~--------~~~~~~~~--~~~~~~v~~~~~s~~g~ 180 (406)
++++ |+.+++|++........ ..+..+ ........ ..|...|.+++|+|+++
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 190 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE 190 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC
Confidence 8777 99999998875322100 000000 00011111 23558899999999999
Q ss_pred EEEEeeCCCeEEEEeCCCcc-eEe-------eeeccCCceeEEEEccCC-CEEEEEeCCCCEEEEEcCCCee----eeec
Q 015490 181 IFAAGSENGNLRVFKWPSLE-IIL-------NESEAHASVKDLSFSPDG-KFLVSLGNRGPGRVWDLASSAV----ATPL 247 (406)
Q Consensus 181 ~l~~~~~dg~i~vwd~~~~~-~~~-------~~~~~~~~i~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~----~~~~ 247 (406)
+|++| .|+.|++||+++.. ... .+..|...|.+++|+|++ ++|++++.|+.|++||+++++. ...+
T Consensus 191 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 269 (447)
T 3dw8_B 191 TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF 269 (447)
T ss_dssp EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE
T ss_pred EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe
Confidence 99998 79999999998443 333 245677799999999998 9999999999999999998886 5666
Q ss_pred ccCCc-----------ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceEEEEeeecCCC-------------
Q 015490 248 AKEND-----------ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKRIRTKQVVREP------------- 302 (406)
Q Consensus 248 ~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~------------- 302 (406)
..+.. ..+.+++|+|+++. +++++. +.|++||+++ ++.+..+..|...
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~------l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 270 EEPEDPSNRSFFSEIISSISDVKFSHSGRY------MMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp CCC-----CCHHHHHTTCEEEEEECTTSSE------EEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ccCCCccccccccccCceEEEEEECCCCCE------EEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 55443 27999999999883 334455 9999999997 7777777777421
Q ss_pred --eEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee-------------------------------cccccceEEE
Q 015490 303 --VSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK-------------------------------KAHLGIVTAL 349 (406)
Q Consensus 303 --i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------------~~~~~~v~~~ 349 (406)
+..++|+|++++|++|+.||.|++||+.+++.+.... ..+...|..+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 3349999999999999999999999999887654211 0234568899
Q ss_pred EEcCCCCeEEEEECCCcEEEEEec
Q 015490 350 AFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 350 ~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
+|+|++.+|++++.++ +++|.-+
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEECC
T ss_pred EECCCCCEEEEEecce-eeeeccc
Confidence 9999999999988775 8888643
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-33 Score=255.59 Aligned_cols=250 Identities=12% Similarity=0.096 Sum_probs=206.1
Q ss_pred EecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCC-EEEEee
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT-IFAAGS 186 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~ 186 (406)
..+|.+.|.+++|+|++.+|++++ ++.+++|+++...... .......+...|.+++|+|+++ +|++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV----------DLLQSLRYKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE----------EEEEEEECSSCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc----------cceeeeecCCceEEEEECCCCCcEEEEEc
Confidence 458999999999999999999987 8888888877532110 1122234668999999999999 999999
Q ss_pred CCCeEEEEeC-CCcceEeeeec--cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCC---------CeeeeecccCCcce
Q 015490 187 ENGNLRVFKW-PSLEIILNESE--AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLAS---------SAVATPLAKENDEL 254 (406)
Q Consensus 187 ~dg~i~vwd~-~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~---------~~~~~~~~~~~~~~ 254 (406)
.||.|++||+ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. +...
T Consensus 77 ~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~ 152 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNK 152 (342)
T ss_dssp TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCC
T ss_pred CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCc
Confidence 9999999999 87765 56666 778999999999 99999999999999999987 66666665 4567
Q ss_pred EEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ce--EEEEeeecCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q 015490 255 FASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WK--RIRTKQVVREPVSSFNVSA-DGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~--~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~ 330 (406)
+.+++|+|++ +++++.++.|++||+++ +. .......+...+.+++|+| +++++++++.||.|++|+++
T Consensus 153 v~~~~~~~~~--------l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 153 IFTMDTNSSR--------LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp EEEEEECSSE--------EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred eEEEEecCCc--------EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 8899999764 34556789999999988 44 3334445678899999999 99999999999999999998
Q ss_pred Cc------eEEEEeeccccc---------ceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 331 SL------QVRTAVKKAHLG---------IVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 331 ~~------~~~~~~~~~~~~---------~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.. +....+. .|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFR-CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp TTCCSTTCTTCEEEE-CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred CCCcccccccceeee-cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 76 6666664 5654 9999999999999999999999999999988765443
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.7e-34 Score=265.78 Aligned_cols=256 Identities=10% Similarity=0.130 Sum_probs=198.1
Q ss_pred cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccccc-------------CcEEEEEEC
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-------------GQQLALTFD 176 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~~~s 176 (406)
.|.+.|++++|+|+|++|++|+ ++.++||++.......... ....+....+.+| ..|.+++|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~---~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS---RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC---CCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc---ccceeEecccccccccccccccccccCceEEEEEc
Confidence 4678999999999999999998 8889998877532100000 0011122223233 779999999
Q ss_pred CCC--CEEEEeeCCCeEEEEeCCCcceE---------------------------------------ee-eeccCCceeE
Q 015490 177 SEG--TIFAAGSENGNLRVFKWPSLEII---------------------------------------LN-ESEAHASVKD 214 (406)
Q Consensus 177 ~~g--~~l~~~~~dg~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~i~~ 214 (406)
|++ .+|++++.|++|++||+.+++.. .. ..+|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 998 79999999999999998764432 11 2457779999
Q ss_pred EEEccCCCEEEEEeCCCCEEEEEcCC-Ceeeeec------ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeC
Q 015490 215 LSFSPDGKFLVSLGNRGPGRVWDLAS-SAVATPL------AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNT 287 (406)
Q Consensus 215 ~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~ 287 (406)
++|+|++++|+++ .|+.|++||+++ ++....+ ...+...+.+++|+|++.. ++++++.|+.|++||+
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-----~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-----TFVYSSSKGTIRLCDM 256 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-----EEEEEETTSCEEEEET
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-----EEEEEeCCCeEEEEEC
Confidence 9999999999998 799999999984 4343321 2235567999999999843 4667788999999999
Q ss_pred CCceE----EEEeeecCC------------CeEEEEEcCCCCEEEEEeCCCcEEEEECCC-ceEEEEeecccccc-----
Q 015490 288 TTWKR----IRTKQVVRE------------PVSSFNVSADGKLLAVGTASGDISIIDSSS-LQVRTAVKKAHLGI----- 345 (406)
Q Consensus 288 ~~~~~----~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~----- 345 (406)
++++. ...+..|.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+. +|...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~-~~~~~~~~l~ 334 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ-VHEYLRSKLC 334 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE-SCGGGTTTHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee-cccccccccc
Confidence 99876 677777765 8999999999999999998 9999999997 77777775 66532
Q ss_pred ----------eEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 346 ----------VTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 346 ----------v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
+..++|+|++++|++++.||.|++||+.+++.
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 23499999999999999999999999988765
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.5e-34 Score=258.07 Aligned_cols=254 Identities=14% Similarity=0.217 Sum_probs=205.7
Q ss_pred EEecCCCCceEEEEccC---C-CeEEEE-ecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC----
Q 015490 108 ELRTDSDLPYRMAIHPH---G-DGIICA-LQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---- 178 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~---~-~~l~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---- 178 (406)
...+|.+.|++++|+|+ + ..++++ +++.+++|++.. ++....+.. .....+...|.+++|+|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~--~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS--QGEIRLLQS------YVDADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG--GGCEEEEEE------EECSCTTCCEEEEEEEECTTTC
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC--CcEEEeeee------ccccCCCCcEEEEEeccCCCCC
Confidence 34589999999999984 3 344444 477778877653 222222111 111124578999999998
Q ss_pred CCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCeeeeecc--cCCcceE
Q 015490 179 GTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSAVATPLA--KENDELF 255 (406)
Q Consensus 179 g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~~~ 255 (406)
+++|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++++|++++.|+.|++||+++++....+. ..+...+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 67999999999999999999999988888888999999999 89999999999999999999999888773 3456679
Q ss_pred EEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee----------------------------ecCCCeEEEE
Q 015490 256 ASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ----------------------------VVREPVSSFN 307 (406)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~----------------------------~~~~~i~~~~ 307 (406)
.+++|+|++.. +++++.|+.|++||+++++....+. .|...|.+++
T Consensus 165 ~~~~~~~~~~~------l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 165 LSADYDLLGEK------IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp EEEEECTTSSE------EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred eEEEECCCCCE------EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 99999999873 4566779999999999865443332 3788999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCceE--------------EEEeecccccceEEEEEcCC--CCeEEEEECCCcEEEEE
Q 015490 308 VSADGKLLAVGTASGDISIIDSSSLQV--------------RTAVKKAHLGIVTALAFSYD--SRALVSASMDSSVRVTV 371 (406)
Q Consensus 308 ~sp~~~~l~~~~~dg~i~i~d~~~~~~--------------~~~~~~~~~~~v~~~~~sp~--~~~l~s~s~dg~i~iw~ 371 (406)
|+ ++++++++.|+.|++||+.++.. +..+. .|...|.+++|+|+ +++|++++.||.|++||
T Consensus 239 ~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 239 WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEE
Confidence 99 77999999999999999987643 56664 78999999999999 99999999999999999
Q ss_pred ecCCcCC
Q 015490 372 IEDKKKS 378 (406)
Q Consensus 372 ~~~~~~~ 378 (406)
+.+++..
T Consensus 316 ~~~~~~~ 322 (366)
T 3k26_A 316 LEVEDPH 322 (366)
T ss_dssp CCSSSGG
T ss_pred CCCCCCc
Confidence 9987643
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.1e-32 Score=255.21 Aligned_cols=257 Identities=17% Similarity=0.203 Sum_probs=213.6
Q ss_pred EEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccC
Q 015490 91 LSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVG 168 (406)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 168 (406)
+..|+... .+.+..+.+|.+.|.+++|+|++ .+++++ |+.+++|+++. + +....+. |..
T Consensus 144 i~vwd~~~----~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--~------------~~~~~~~~h~~ 204 (464)
T 3v7d_B 144 IRVYDSIN----KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--G------------CCTHVFEGHNS 204 (464)
T ss_dssp EEEEETTT----TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT--T------------EEEEEECCCSS
T ss_pred EEEEECCC----CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC--C------------cEEEEECCCCC
Confidence 45556544 34778899999999999999988 777776 88988877652 2 2233333 558
Q ss_pred cEEEEEEC--CCCCEEEEeeCCCeEEEEeCCCcce-----------------------EeeeeccCCceeEEEEccCCCE
Q 015490 169 QQLALTFD--SEGTIFAAGSENGNLRVFKWPSLEI-----------------------ILNESEAHASVKDLSFSPDGKF 223 (406)
Q Consensus 169 ~v~~~~~s--~~g~~l~~~~~dg~i~vwd~~~~~~-----------------------~~~~~~~~~~i~~~~~s~~~~~ 223 (406)
.|.+++|+ ++++++++|+.||.|++||++++.. ...+.+|...|.++ ++++++
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~ 282 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNI 282 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTE
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCE
Confidence 89999998 5789999999999999999987653 33445566667666 677899
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCe
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPV 303 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i 303 (406)
+++++.|+.|++||+++++.+..+..+ ...+.+++|+|+++. +++++.|+.|++||+++++.+..+..|...|
T Consensus 283 l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~------l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 283 VVSGSYDNTLIVWDVAQMKCLYILSGH-TDRIYSTIYDHERKR------CISASMDTTIRIWDLENGELMYTLQGHTALV 355 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEETTTTE------EEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCC-CCCEEEEEEcCCCCE------EEEEeCCCcEEEEECCCCcEEEEEeCCCCcE
Confidence 999999999999999999998888754 556899999999883 5667789999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 304 SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
.+++|+ +++|++++.||.|++||+.++....... |...+..++|++++++|++++ ||.|++||+++++.+..
T Consensus 356 ~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 356 GLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred EEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 999998 5799999999999999999988776664 777788899999999999988 89999999999987653
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-34 Score=282.26 Aligned_cols=250 Identities=15% Similarity=0.154 Sum_probs=205.1
Q ss_pred eEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC--CCEE
Q 015490 107 AELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE--GTIF 182 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~--g~~l 182 (406)
..+.+|.+.|++++|+|+++++++++ ++.++||++...+. .....+. |.+.|.+++|+|+ +++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------------~~~~~l~~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------------EEEEEECCCSSCEEEEEECCTTSCSEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------------ccceeccCCcCceEEEEecCCCCCCEE
Confidence 46789999999999999999999997 88899988774322 2223333 5588999999988 9999
Q ss_pred EEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCCeee--eecccCCcceEE
Q 015490 183 AAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASSAVA--TPLAKENDELFA 256 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~~~~~~~ 256 (406)
++|+.||.|++||+.+++ ....+..|...|++++|+|+ ++.+++++.||.|++||++++... ..+. .+...+.
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~ 149 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVN 149 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEE
T ss_pred EEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceE
Confidence 999999999999999886 66667778889999999999 999999999999999999887432 2222 3456799
Q ss_pred EEEEEcC-------------CCCceEEEEEEEcCCCcEEEEEeCCCc----eEEEEeeecCCCeEEEEEcCC---CCEEE
Q 015490 257 SCRFSPL-------------NNEDYVLYIAAITDRGASIVTWNTTTW----KRIRTKQVVREPVSSFNVSAD---GKLLA 316 (406)
Q Consensus 257 ~~~~~~~-------------~~~~~~l~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~i~~~~~sp~---~~~l~ 316 (406)
+++|+|. +. .+++++.|+.|++||++++ .....+..|...|.+++|+|+ +++|+
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~------~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~ 223 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESR------KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 223 (753)
T ss_dssp EEEECCCC---------CGGGC------CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred EEEecCcccccccccccCCCCC------EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEE
Confidence 9999994 55 3566678999999999876 566778889999999999999 89999
Q ss_pred EEeCCCcEEEEECCCce-----EEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 317 VGTASGDISIIDSSSLQ-----VRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 317 ~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+++.||.|++||+.+++ ..... ..|...|++++|+|+|++|++++.||.|++|++.++.
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCBSSS-SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EEecCCEEEEecCCCCCCcceeEEecc-CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 99999999999998864 22222 2588899999999999999999999999999998644
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-34 Score=270.40 Aligned_cols=252 Identities=12% Similarity=0.076 Sum_probs=195.8
Q ss_pred ceeEEecCCCCceEEEEccCC---------CeEEEEe--------------------cCCeEEEEEecccccceeeccee
Q 015490 105 PVAELRTDSDLPYRMAIHPHG---------DGIICAL--------------------QNSCRLFEWDEVENTEIRRLGVK 155 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~---------~~l~~~~--------------------~~~~~i~~~~~~~~~~~~~~~~~ 155 (406)
....+. +.+.|.+|+|+|++ .+|+++. |+.++||+++.....
T Consensus 126 ~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~-------- 196 (524)
T 2j04_B 126 RGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH-------- 196 (524)
T ss_dssp CEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC--------
T ss_pred ceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC--------
Confidence 333444 68899999999987 5666643 456788887643211
Q ss_pred ccceeeecccc-cCcEEEEEECCC------CCEEEEeeCCCeEEEEeCCCcce-----------EeeeeccCCceeEEEE
Q 015490 156 ISEKVLSQLEN-VGQQLALTFDSE------GTIFAAGSENGNLRVFKWPSLEI-----------ILNESEAHASVKDLSF 217 (406)
Q Consensus 156 ~~~~~~~~~~~-~~~v~~~~~s~~------g~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~i~~~~~ 217 (406)
......+.+ .+.|.+++|+|+ +.+||+++.||+|++||+.++.. ...+.+|...|++++|
T Consensus 197 --~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 197 --CVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp --EEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEE
T ss_pred --ceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEe
Confidence 001122334 478999999997 57999999999999999976642 1245567779999999
Q ss_pred ccCCCEEEEEeCCCCEEEEEcCCCeee-eecccCCcceEEEE--EEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEE
Q 015490 218 SPDGKFLVSLGNRGPGRVWDLASSAVA-TPLAKENDELFASC--RFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIR 294 (406)
Q Consensus 218 s~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~ 294 (406)
++++ .|++|+.||+|++||++++... ..+.. |...|.++ .|+|++.. ++++++.|++|++||+++++...
T Consensus 275 s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~-----~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 275 LSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDT-----VVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp SSSS-EEEEEETTSEEEEEETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCC-----EEEEEETTSEEEEECGGGHHHHC
T ss_pred cCCC-eEEEEeCCCEEEEEECCCCCCceEEeec-ccccEEEEEEEcCCCCCe-----EEEEeccCCeEEEEECCCCCccc
Confidence 9864 8999999999999999876433 33444 45668888 56777633 56788899999999999988766
Q ss_pred EeeecCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEe
Q 015490 295 TKQVVRE--PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 295 ~~~~~~~--~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
.+..|.. .+.+++|+|+++.+++++.|++|++||++++..+..+. +|.+.|++++|+|+|++|++|+.|++|++||+
T Consensus 348 ~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 348 TTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred ccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 6666643 47899999999999999999999999999988877776 79999999999999999999999999999998
Q ss_pred cCC
Q 015490 373 EDK 375 (406)
Q Consensus 373 ~~~ 375 (406)
..+
T Consensus 427 ~~~ 429 (524)
T 2j04_B 427 ARR 429 (524)
T ss_dssp CSS
T ss_pred hHh
Confidence 653
No 82
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-32 Score=247.89 Aligned_cols=261 Identities=12% Similarity=0.028 Sum_probs=207.4
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCC-eEEEEe-cCCeEEEEE-ecc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGD-GIICAL-QNSCRLFEW-DEV 144 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~~~~-~~~~~i~~~-~~~ 144 (406)
+++++++++..+ .+.++.++..... .....+.+|...|.+++|+|+++ +|++++ ++.+++|++ +..
T Consensus 22 ~~~~l~~~~~d~--------~v~iw~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 22 SKSLLLITSWDG--------SLTVYKFDIQAKN---VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp GGTEEEEEETTS--------EEEEEEEETTTTE---EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CCCEEEEEcCCC--------eEEEEEeCCCCcc---ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 556666664332 3455555443211 23556679999999999999999 898887 888888765 432
Q ss_pred cccceeecceeccceeeeccc--ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC---------cceEeeeeccCCcee
Q 015490 145 ENTEIRRLGVKISEKVLSQLE--NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPS---------LEIILNESEAHASVK 213 (406)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~i~ 213 (406)
. ...... +...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. +...|.
T Consensus 91 --~------------~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~ 154 (342)
T 1yfq_A 91 --S------------FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIF 154 (342)
T ss_dssp --S------------EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEE
T ss_pred --c------------eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceE
Confidence 1 111122 558899999999 99999999999999999987 66665554 667999
Q ss_pred EEEEccCCCEEEEEeCCCCEEEEEcCC-Cee-eeecccCCcceEEEEEEEc-CCCCceEEEEEEEcCCCcEEEEEeCCCc
Q 015490 214 DLSFSPDGKFLVSLGNRGPGRVWDLAS-SAV-ATPLAKENDELFASCRFSP-LNNEDYVLYIAAITDRGASIVTWNTTTW 290 (406)
Q Consensus 214 ~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~ 290 (406)
+++|+|++ +++++.|+.|++||+++ +.. .......+...+.+++|+| +++ .+++++.++.|++||++..
T Consensus 155 ~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~------~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 155 TMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE------GYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC------EEEEEETTSEEEEEECCTT
T ss_pred EEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC------EEEEEecCCcEEEEEEcCC
Confidence 99999987 99999999999999988 543 2223334556789999999 887 3455677999999999876
Q ss_pred ------eEEEEeeecCC---------CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeeccc-ccceEEEEEcCC
Q 015490 291 ------KRIRTKQVVRE---------PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAH-LGIVTALAFSYD 354 (406)
Q Consensus 291 ------~~~~~~~~~~~---------~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~sp~ 354 (406)
+....+..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+. +| ..+|.+++ |+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~--~~ 303 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-KFNEDSVVKIA--CS 303 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC-CCSSSEEEEEE--EC
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh-cccCCCceEec--CC
Confidence 67777877754 89999999999999999999999999999999998886 67 99999999 99
Q ss_pred CCeEEEEECCCc
Q 015490 355 SRALVSASMDSS 366 (406)
Q Consensus 355 ~~~l~s~s~dg~ 366 (406)
+++|++++.||.
T Consensus 304 ~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 304 DNILCLATSDDT 315 (342)
T ss_dssp SSEEEEEEECTH
T ss_pred CCeEEEEecCCc
Confidence 999999999998
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7e-32 Score=262.93 Aligned_cols=283 Identities=11% Similarity=0.124 Sum_probs=228.0
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCC-ceEEEEcc--CCCeEEEEe-cCCeEEEEEec
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDL-PYRMAIHP--HGDGIICAL-QNSCRLFEWDE 143 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp--~~~~l~~~~-~~~~~i~~~~~ 143 (406)
++++++++++ + .+..|+.....-..+....+.+|.+. |++++|+| ++++|++++ ++.+++|++..
T Consensus 29 dg~~l~~~~~-~----------~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 29 TTNAIAYPCG-K----------SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TTTEEEEEET-T----------EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CCCEEEEecC-C----------eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 6777777642 1 34455554421122578889999999 99999999 999999988 88899988853
Q ss_pred ccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCC----CeEEEEeCCCcceEeeeeccCCceeEEEEc
Q 015490 144 VENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSEN----GNLRVFKWPSLEIILNESEAHASVKDLSFS 218 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s 218 (406)
..... .+ .......+. +...|.+++|+|++++|++++.+ +.|++|| +++....+..|...|.+++|+
T Consensus 98 ~~~~~--~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 98 DKESN--SV----EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EGGGT--EE----EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEEC
T ss_pred Ccccc--cc----cccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEEC
Confidence 21000 00 111222233 45789999999999999999987 6888888 566777888888899999999
Q ss_pred cCCC-EEEEEeCCCCEEEEEcCCCeeeeecccCCcc--eEEEEEEEcC-CCCceEEEEEEEcCCCcEEEEEeCCCceEEE
Q 015490 219 PDGK-FLVSLGNRGPGRVWDLASSAVATPLAKENDE--LFASCRFSPL-NNEDYVLYIAAITDRGASIVTWNTTTWKRIR 294 (406)
Q Consensus 219 ~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~ 294 (406)
|+++ .+++++.|+.|++||+.+++....+..+... .+.+++|+|+ ++ .+++++.++.|++||+++++.+.
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE------FVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC------EEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC------EEEEEeCCCeEEEEECCCCCEeE
Confidence 9998 8999999999999999999998888765431 6899999999 76 35566779999999999999999
Q ss_pred Ee-e---ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeeccc----ccceEEEEEcCCCCeEEEEECCCc
Q 015490 295 TK-Q---VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAH----LGIVTALAFSYDSRALVSASMDSS 366 (406)
Q Consensus 295 ~~-~---~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~s~s~dg~ 366 (406)
.+ . .|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+. .+ ...+.++.|+ ++.++++++.|+.
T Consensus 244 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 244 YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT-LDKQQLGNQQVGVVAT-GNGRIISLSLDGT 320 (615)
T ss_dssp ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE-CCTTCGGGCEEEEEEE-ETTEEEEEETTSC
T ss_pred EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcccCceeEEEeC-CCCeEEEEECCCC
Confidence 88 6 788999999999 99999999999999999999999888886 44 4678888886 8899999999999
Q ss_pred EEEEEecCCcCC
Q 015490 367 VRVTVIEDKKKS 378 (406)
Q Consensus 367 i~iw~~~~~~~~ 378 (406)
|++||+.+++.+
T Consensus 321 i~~~d~~~~~~~ 332 (615)
T 1pgu_A 321 LNFYELGHDEVL 332 (615)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCCCcEE
Confidence 999999876554
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-32 Score=288.06 Aligned_cols=272 Identities=16% Similarity=0.234 Sum_probs=227.0
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++++++++..| .+..|+... .+.+..+.+|.+.|.+++|+|+++++++++ |+.+++|++. ++
T Consensus 626 ~~~~l~s~~~d~----------~i~vw~~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~--~~ 689 (1249)
T 3sfz_A 626 DGQRIASCGADK----------TLQVFKAET----GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA--TG 689 (1249)
T ss_dssp TSSEEEEEETTS----------CEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--TC
T ss_pred CCCEEEEEeCCC----------eEEEEECCC----CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC--CC
Confidence 677777665433 345556554 347788999999999999999999999987 7777777654 23
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDS--EGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKF 223 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~--~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 223 (406)
+ .+..+. |...|.+++|+| ++.++++|+.|+.|++||+++++....+.+|...|++++|+|++++
T Consensus 690 ~------------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 690 K------------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL 757 (1249)
T ss_dssp C------------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE
T ss_pred c------------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE
Confidence 2 222333 457899999999 5568999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccC------------CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKE------------NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK 291 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~ 291 (406)
|++++.||.|++||+++++....+... ....+.+++|+|++.. +++.+ ++.+.+||+.++.
T Consensus 758 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~-----l~~~~--~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 758 LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK-----IIVAA--KNKVLLFDIHTSG 830 (1249)
T ss_dssp EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE-----EEEEE--TTEEEEEETTTCC
T ss_pred EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE-----EEEEc--CCcEEEEEecCCC
Confidence 999999999999999988776654321 1225778999999984 22322 6899999999988
Q ss_pred EEEEee-ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEE
Q 015490 292 RIRTKQ-VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVT 370 (406)
Q Consensus 292 ~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw 370 (406)
....+. .|...+.+++|+|+++++++++.||.|++||+.++.....+. +|...|.+++|+|+|++|++++.||.|++|
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw 909 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEE
Confidence 877776 678899999999999999999999999999999999998886 899999999999999999999999999999
Q ss_pred EecCC
Q 015490 371 VIEDK 375 (406)
Q Consensus 371 ~~~~~ 375 (406)
++.+.
T Consensus 910 ~~~~~ 914 (1249)
T 3sfz_A 910 ETKKV 914 (1249)
T ss_dssp EHHHH
T ss_pred Ecccc
Confidence 98754
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.6e-33 Score=263.16 Aligned_cols=256 Identities=14% Similarity=0.141 Sum_probs=197.6
Q ss_pred ceeEEecCCCCceEEEEccC-CCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECC-CCCE
Q 015490 105 PVAELRTDSDLPYRMAIHPH-GDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDS-EGTI 181 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~-~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~ 181 (406)
......+|...|+|++|+|. +..|++|+ |+.++||+++..... .......|.+.|++++|+| ++++
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-----------~~~~~~gH~~~V~~l~f~p~~~~~ 179 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-----------TFIKGIGAGGSITGLKFNPLNTNQ 179 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-----------EEECCCSSSCCCCEEEECSSCTTE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-----------eEEEccCCCCCEEEEEEeCCCCCE
Confidence 44567889999999999995 56788887 899999876543211 1122234668999999998 6899
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccC--CceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEE
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAH--ASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCR 259 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 259 (406)
|++|+.||+|++||++++........+. ..+.+++|+|++++|++++.||.|++||++. +.+..+.. +...|.+++
T Consensus 180 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~-h~~~v~~v~ 257 (435)
T 4e54_B 180 FYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRM-HKKKVTHVA 257 (435)
T ss_dssp EEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBC-CSSCEEEEE
T ss_pred EEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEec-ccceEEeee
Confidence 9999999999999998765433322222 2678999999999999999999999999964 45555654 455789999
Q ss_pred EEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEE---eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 260 FSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRT---KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
|+|++.. ++++++.|+.|++||+++.+.... ...|...|.+++|+|+|++|++++.||.|++||+.++....
T Consensus 258 ~~p~~~~-----~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 258 LNPCCDW-----FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp ECTTCSS-----EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred ecCCCce-----EEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 9999986 566778899999999987654332 35678899999999999999999999999999999987766
Q ss_pred Eeeccccc------ceEEEEEcCCCCeEEEEE------------CCCcEEEEEecCCcCCC
Q 015490 337 AVKKAHLG------IVTALAFSYDSRALVSAS------------MDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 337 ~~~~~~~~------~v~~~~~sp~~~~l~s~s------------~dg~i~iw~~~~~~~~~ 379 (406)
.+. .|.. .+..+.|+|++.++++++ .++.|++||+.+++.+.
T Consensus 333 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 333 GLI-PHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EEC-CCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EEe-cccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 654 3432 234567788777777664 23579999999887654
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=242.07 Aligned_cols=246 Identities=17% Similarity=0.194 Sum_probs=205.1
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeec-ccccCcEEEEEECCCCCE
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQ-LENVGQQLALTFDSEGTI 181 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~ 181 (406)
+....+.+|.+.|.+++| |++.+|++++ ++.+++|+++. .. .... ..+...|.+++|+|++++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~--~~------------~~~~~~~~~~~v~~~~~~~~~~~ 73 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD--QW------------LGTVVYTGQGFLNSVCYDSEKEL 73 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS--SE------------EEEEEEECSSCEEEEEEETTTTE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC--CE------------EEEEeecCCccEEEEEECCCCCE
Confidence 577889999999999999 9999999988 88888887743 21 1122 234688999999999999
Q ss_pred EEEeeCCCeEEEEeCCCc---ceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEE
Q 015490 182 FAAGSENGNLRVFKWPSL---EIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASC 258 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (406)
|++++.||.|++|++... +....+..|...|.+++| +++++++++.|+.|++|| .++....+..+ ...+.++
T Consensus 74 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~-~~~v~~~ 148 (313)
T 3odt_A 74 LLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAH-NASVWDA 148 (313)
T ss_dssp EEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECC-SSCEEEE
T ss_pred EEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccC-CCceeEE
Confidence 999999999999998654 456667778889999999 577999999999999999 56666666544 5568899
Q ss_pred EEEc-CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 259 RFSP-LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV-VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 259 ~~~~-~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
.|.| ++. .+++++.++.|++|| ..+....+.. +...+.+++|+|++. +++++.||.|++||+++++.+.
T Consensus 149 ~~~~~~~~------~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 149 KVVSFSEN------KFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp EEEETTTT------EEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE
T ss_pred EEccCCCC------EEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh
Confidence 9998 555 355667899999999 4456666666 788999999999998 8999999999999999999999
Q ss_pred EeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 337 AVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 337 ~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
.+. .|...|.+++|+|++ .|++++.||.|++||+++++.+..
T Consensus 220 ~~~-~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 220 TYE-GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp EEE-CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred hhh-cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE
Confidence 886 899999999999999 689999999999999998876543
No 87
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=6.4e-32 Score=245.38 Aligned_cols=244 Identities=12% Similarity=0.101 Sum_probs=189.1
Q ss_pred cceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEE-
Q 015490 104 QPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIF- 182 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l- 182 (406)
+++.....|.+.|.+++|+|||++|++|+++.++||+.+.. ... ... ....+..+++.++++.+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~--~~~------------~~~-~~~~~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPV--AHI------------MSQ-EMRHLSKVRMLHRTNYVA 74 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSEEEEEEETTE--EEE------------EEE-ECSCCCEEEECTTSSEEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCc--cee------------eee-ecCCeEEEEEcCCCCEEE
Confidence 35667789999999999999999999998777888876531 111 111 12247778899888877
Q ss_pred EEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC-eeeeecccCCcceEEEEEEE
Q 015490 183 AAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS-AVATPLAKENDELFASCRFS 261 (406)
Q Consensus 183 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~ 261 (406)
++++.|++|++||+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. ....++++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s 146 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFS 146 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEE
Confidence 567888999999999999887765 56689999998864 4444 3779999999988 66665543 34456677
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeCCCce----------------EEEEeeecCCCeEEEEEcCCCCEEEEEeCCCc-E
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNTTTWK----------------RIRTKQVVREPVSSFNVSADGKLLAVGTASGD-I 324 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~----------------~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~-i 324 (406)
+ .. +.++++..++.|++||+++++ .+..+..|...|.+++|+|+|++|++|+.|++ |
T Consensus 147 ~--~~----la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 147 N--GL----LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp T--TE----EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred c--cE----EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 7 21 233337899999999999865 16778899999999999999999999999998 9
Q ss_pred EEEECCCceEEEEeecc-cccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 325 SIIDSSSLQVRTAVKKA-HLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 325 ~i~d~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
++||+++++.+..+..+ |...|.+++|+|++++|++++.|++|++||++++.
T Consensus 221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 99999999999998645 99999999999999999999999999999998764
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-32 Score=288.53 Aligned_cols=291 Identities=18% Similarity=0.211 Sum_probs=236.5
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccc
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVE 145 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~ 145 (406)
++++.+++++..| .+..|+... ...+..+.+|...|.+++|+|+++++++++ ++.+++|+.....
T Consensus 850 p~~~~l~~~~~dg----------~v~vwd~~~----~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~ 915 (1249)
T 3sfz_A 850 PYDHLAVIALSQY----------CVELWNIDS----RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVC 915 (1249)
T ss_dssp SSTTEEEEECSSS----------CEEEEETTT----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHH
T ss_pred CCCCEEEEEeCCC----------eEEEEEcCC----CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccc
Confidence 3666766664433 244555544 347788999999999999999999999988 8899998754311
Q ss_pred ccceee----------------ccee--------ccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcce
Q 015490 146 NTEIRR----------------LGVK--------ISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEI 201 (406)
Q Consensus 146 ~~~~~~----------------~~~~--------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~ 201 (406)
...... .... ..............+.+++|+|+++++++|+.+|.|++||+.+++.
T Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~ 995 (1249)
T 3sfz_A 916 KNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRV 995 (1249)
T ss_dssp SCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSC
T ss_pred eeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCce
Confidence 100000 0000 0000000112345799999999999999999999999999999998
Q ss_pred EeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcE
Q 015490 202 ILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGAS 281 (406)
Q Consensus 202 ~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 281 (406)
...+..|...|++++|+|++++|++++.|+.|++||+.+++..... .+...+.++.|+|++. +++++.++.
T Consensus 996 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-------l~~~~~dg~ 1066 (1249)
T 3sfz_A 996 FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ--AHQETVKDFRLLQDSR-------LLSWSFDGT 1066 (1249)
T ss_dssp EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB--CCSSCEEEEEECSSSE-------EEEEESSSE
T ss_pred eeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe--cCCCcEEEEEEcCCCc-------EEEEECCCc
Confidence 8888888889999999999999999999999999999998876533 4556788999999764 345567999
Q ss_pred EEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEE
Q 015490 282 IVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSA 361 (406)
Q Consensus 282 i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 361 (406)
|++||+.+++....+..|...|.+++|+|+++++++++.|+.|++||+.+++.+..+. +|...|++++|+|+|++|+++
T Consensus 1067 v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~-~h~~~v~~~~~s~dg~~lat~ 1145 (1249)
T 3sfz_A 1067 VKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELK-GHNGCVRCSAFSLDGILLATG 1145 (1249)
T ss_dssp EEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCC-CCSSCEEEEEECSSSSEEEEE
T ss_pred EEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeec-cCCCcEEEEEECCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999888885 899999999999999999999
Q ss_pred ECCCcEEEEEecCCcCCCCc
Q 015490 362 SMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 362 s~dg~i~iw~~~~~~~~~~~ 381 (406)
+.||.|++||+.+++.+..+
T Consensus 1146 ~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1146 DDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp ETTSCCCEEESSSSCCCCCC
T ss_pred eCCCEEEEEECCCCceEEEe
Confidence 99999999999999877654
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.4e-32 Score=266.23 Aligned_cols=252 Identities=17% Similarity=0.254 Sum_probs=213.9
Q ss_pred cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccc-ccCc-EEEEEECC--CCCEEEEee
Q 015490 111 TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQ-QLALTFDS--EGTIFAAGS 186 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~~s~--~g~~l~~~~ 186 (406)
.|.+.|.+++|+|++++|++++++.+.+|+++. +.. ..+....+. |... |.+++|+| ++++|++|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~--~~~--------~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDD--GDS--------KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCS--SCC--------SSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCC--CCC--------ccccceEEecCCCceEEEEEECcCCCCCEEEEec
Confidence 688999999999999999999988888877652 200 001222333 4578 99999999 999999999
Q ss_pred CCCeEEEEeCCCc--------ceEeeeeccCCceeEEEEccCCCEEEEEeCC----CCEEEEEcCCCeeeeecccCCcce
Q 015490 187 ENGNLRVFKWPSL--------EIILNESEAHASVKDLSFSPDGKFLVSLGNR----GPGRVWDLASSAVATPLAKENDEL 254 (406)
Q Consensus 187 ~dg~i~vwd~~~~--------~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~~~~ 254 (406)
.||.|++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++....+.. +...
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~-~~~~ 162 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSG-HSQR 162 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCS-CSSC
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeec-CCcc
Confidence 9999999999754 5666677788899999999999999999987 6788888 5666777765 4557
Q ss_pred EEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCC---CeEEEEEcCC-CCEEEEEeCCCcEEEEECC
Q 015490 255 FASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVRE---PVSSFNVSAD-GKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~i~~~~~sp~-~~~l~~~~~dg~i~i~d~~ 330 (406)
+.+++|+|+++. .+++++.++.|++||..+++.+..+..|.. .|.+++|+|+ +++|++++.||.|++||+.
T Consensus 163 v~~~~~~~~~~~-----~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 163 INACHLKQSRPM-----RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp EEEEEECSSSSC-----EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred EEEEEECCCCCc-----EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 899999999985 456678899999999999999999999988 9999999999 9999999999999999999
Q ss_pred CceEEEEeec---ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 331 SLQVRTAVKK---AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 331 ~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
+++.+..+.. .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 9999888844 699999999999 9999999999999999999988765443
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.6e-31 Score=251.85 Aligned_cols=244 Identities=19% Similarity=0.223 Sum_probs=203.9
Q ss_pred ceeEEecCCCCc-eEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCE
Q 015490 105 PVAELRTDSDLP-YRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTI 181 (406)
Q Consensus 105 ~~~~~~~h~~~v-~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~ 181 (406)
....+.+|...| .++.+ ++.++++++ |+.+++|+... + +.+..+. |.+.|.+++|++++ +
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~--~------------~~~~~~~~h~~~V~~l~~~~~~-~ 175 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN--K------------KFLLQLSGHDGGVWALKYAHGG-I 175 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT--T------------EEEEEECCCSSCEEEEEECSTT-E
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC--C------------cEEEEEeCCCcCEEEEEEcCCC-E
Confidence 456889999886 55555 567888887 88888876542 2 2333333 55899999999988 9
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEc--cCCCEEEEEeCCCCEEEEEcCCCeeee--------------
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFS--PDGKFLVSLGNRGPGRVWDLASSAVAT-------------- 245 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~s~s~d~~i~iwd~~~~~~~~-------------- 245 (406)
+++|+.||+|++||+++++....+..|...|.+++|+ ++++++++++.|+.|++||++++....
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred EEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 9999999999999999999998888888899999998 577899999999999999998765332
Q ss_pred ---------ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEE
Q 015490 246 ---------PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLA 316 (406)
Q Consensus 246 ---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~ 316 (406)
.+. .+...+.++ +++++ .+++++.|+.|++||+++++.+..+..|...|.+++|+|++++++
T Consensus 256 ~~~~~~~~~~~~-~~~~~v~~~--~~~~~------~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (464)
T 3v7d_B 256 PEENPYFVGVLR-GHMASVRTV--SGHGN------IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI 326 (464)
T ss_dssp GGGCTTEEEEEC-CCSSCEEEE--EEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred cCCCeEEEEEcc-CccceEEEE--cCCCC------EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE
Confidence 222 233344444 56666 356667899999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 317 VGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 317 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
+|+.||.|++||+++++.+..+. +|...|.++.|+ +.+|++++.||.|++||+.+++.
T Consensus 327 sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 327 SASMDTTIRIWDLENGELMYTLQ-GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEeCCCcEEEEECCCCcEEEEEe-CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 99999999999999999999986 899999999997 57999999999999999988764
No 91
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-32 Score=242.83 Aligned_cols=209 Identities=16% Similarity=0.176 Sum_probs=183.4
Q ss_pred cccc-cCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCC-----cceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEE
Q 015490 163 QLEN-VGQQLALTFDSEG-TIFAAGSENGNLRVFKWPS-----LEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRV 235 (406)
Q Consensus 163 ~~~~-~~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~i 235 (406)
++.+ .+.|.+++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 3444 4889999999965 8999999999999999864 2345667788889999999999999999999999999
Q ss_pred EEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCC----
Q 015490 236 WDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSAD---- 311 (406)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~---- 311 (406)
||+++++....+..| ...+.+++|+|++. .+++++.|+.|++||++. +.+..+..|...+.++.|+|.
T Consensus 92 wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~------~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 92 WDVATGETYQRFVGH-KSDVMSVDIDKKAS------MIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp EETTTTEEEEEEECC-SSCEEEEEECTTSC------EEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC----
T ss_pred EECCCCCeeEEEccC-CCcEEEEEEcCCCC------EEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCC
Confidence 999999998888765 45688999999987 456778899999999975 567788889999999999995
Q ss_pred --CCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 312 --GKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 312 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
+..+++++.|+.|++||+++.+....+. +|...|.+++|+|+|++|++++.||+|++||+.+++.+..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~ 233 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT 233 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4589999999999999999999888885 8999999999999999999999999999999998775443
No 92
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.5e-31 Score=233.44 Aligned_cols=266 Identities=12% Similarity=0.071 Sum_probs=191.9
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceecc----ceeeeccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKIS----EKVLSQLE 165 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 165 (406)
.+..|+.... ++-+.+.++.+|+.+|..+.+.||...|++..=+.+.+-.... +...+. .+.+..-.
T Consensus 64 ~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~s--------la~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 64 VVSLWKALDA-WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRA--------LFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEEESSS-SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEE--------ECC------CCEEEEEEE
T ss_pred eEEEcccCCC-ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEE--------EEECCCccccccEEEeCC
Confidence 4556666552 4447899999999999999999998877776644333222211 111111 11111111
Q ss_pred ccCcEEEEEECCCCCEEEEee--CCCeEEEEeC-CCcceEeeeeccCCceeEEEEcc---CCCEEEEEeCCCCEEEEEcC
Q 015490 166 NVGQQLALTFDSEGTIFAAGS--ENGNLRVFKW-PSLEIILNESEAHASVKDLSFSP---DGKFLVSLGNRGPGRVWDLA 239 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~~--~dg~i~vwd~-~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~s~s~d~~i~iwd~~ 239 (406)
+...+..+ ++++++.+++ .|+.|++|++ .+++.+..+..|...++.++|++ ++..|++++.|++|+|||++
T Consensus 135 ~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 135 NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 12233333 5677666643 5999999999 55888888888888999999999 77999999999999999999
Q ss_pred CCeeeeecccCCc--ceEEEEEEEcCCCCceEEE---------EEEEcCCCcEEEEEeCCCceEEEEee-----ecCCCe
Q 015490 240 SSAVATPLAKEND--ELFASCRFSPLNNEDYVLY---------IAAITDRGASIVTWNTTTWKRIRTKQ-----VVREPV 303 (406)
Q Consensus 240 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~i 303 (406)
++++++.+..++. ..+.+++|+|++.. +. .+++++.|++|++||..+++.+..+. +|...+
T Consensus 212 TGk~l~tL~g~~~~v~~v~~vafSpdG~~---lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 212 TGQLLKKMHIDDSYQASVCHKAYSEMGLL---FIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp TCCEEEEEECCC---CCCEEEEEEETTEE---EEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CCcEEEEEcCCCcceeeeEEEEECCCCCE---EEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 9999999875432 35667899999863 11 13678899999999999999877652 444444
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceE-EEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 304 SSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVT-ALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
.+..++ +.++++++.|++|+|||+.+++.+.++. +|...+. .++|+|||++|++|+.|++|+|||+.
T Consensus 289 lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 289 LEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEEC-CC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred EccccC--CCEEEEEcCCCcEEEEECCCCcEEEEec-CCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 444444 8899999999999999999999999986 7877655 68999999999999999999999963
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=244.49 Aligned_cols=247 Identities=12% Similarity=0.089 Sum_probs=197.8
Q ss_pred ecCCCCceEEEEccCCCeE-EEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC
Q 015490 110 RTDSDLPYRMAIHPHGDGI-ICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE 187 (406)
Q Consensus 110 ~~h~~~v~~~~~sp~~~~l-~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 187 (406)
.+|.+.|.+++|+|++++| ++++ ++.++||++....++....+ ....+...|.+++|+|++++|++|+.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~---------~~~~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLR---------KRFCFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE---------EEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeee---------ecccCCCCceEEEEcCCCCEEEEEeC
Confidence 3567789999999999997 5665 88899988763233322221 11234578999999999999999999
Q ss_pred CCeEEEEeCCCcceEe----eeeccCCceeEEEEccC---CCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEE
Q 015490 188 NGNLRVFKWPSLEIIL----NESEAHASVKDLSFSPD---GKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRF 260 (406)
Q Consensus 188 dg~i~vwd~~~~~~~~----~~~~~~~~i~~~~~s~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (406)
+|.|++|++.+++... .+.+|...|++++|+|+ +++|++++.|+.|++||+++++.+..+...+...+.+++|
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICC 249 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEE
Confidence 9999999998776543 66778889999999999 9999999999999999999998887755556678999999
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec-------------------------CCCeEEEEEcCCCCEE
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV-------------------------REPVSSFNVSADGKLL 315 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------------------------~~~i~~~~~sp~~~~l 315 (406)
+ +++ .+++++.|+.|++||+++++.+..+..+ ...+.+++|+|++++|
T Consensus 250 s-d~~------~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 250 G-KDY------LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp C-STT------EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred C-CCC------EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9 777 3456678999999999999988887632 3578999999999999
Q ss_pred EEEe-CCCcEEEEEC--CCc---eEEEEeecccccceEEEEEcCCCCeEEEE-EC------CCcEEEEEecCC
Q 015490 316 AVGT-ASGDISIIDS--SSL---QVRTAVKKAHLGIVTALAFSYDSRALVSA-SM------DSSVRVTVIEDK 375 (406)
Q Consensus 316 ~~~~-~dg~i~i~d~--~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-s~------dg~i~iw~~~~~ 375 (406)
++++ .++.|++|++ .++ +.+..+. .| ..|.+++|+|++ .+++. +. +..|.+|.+...
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~-~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIIT-FP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEE-CS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEec-cC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence 9999 8999999999 555 6666665 56 889999999964 44444 32 556899988654
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.8e-31 Score=249.32 Aligned_cols=264 Identities=18% Similarity=0.236 Sum_probs=209.7
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++.+++++..| .+..|+... .+.+..+.+|.+.|.+++| ++..+++++ |+.+++|++.. +
T Consensus 142 d~~~l~~g~~dg----------~i~iwd~~~----~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~--~ 203 (435)
T 1p22_A 142 DDQKIVSGLRDN----------TIKIWDKNT----LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT--G 203 (435)
T ss_dssp CSSEEEEEESSS----------CEEEEESSS----CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS--C
T ss_pred CCCEEEEEeCCC----------eEEEEeCCC----CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC--C
Confidence 566666654433 344555544 3467889999999999999 778899887 88888887653 2
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceE---eeeeccCCceeEEEEccCCC
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEII---LNESEAHASVKDLSFSPDGK 222 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~i~~~~~s~~~~ 222 (406)
+ .+..+. +...|.+++|++ .++++|+.||.|++||+.++... ..+.+|...|.+++| +++
T Consensus 204 ~------------~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 204 E------------MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK 267 (435)
T ss_dssp C------------EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT
T ss_pred c------------EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC
Confidence 2 222333 457899999974 59999999999999999887654 556677779999999 688
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCC
Q 015490 223 FLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREP 302 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 302 (406)
++++++.|+.|++||+++++.+..+..+ ...+.++.|+ +. .+++++.|+.|++||+++++.+..+..|...
T Consensus 268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~~------~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~ 338 (435)
T 1p22_A 268 YIVSASGDRTIKVWNTSTCEFVRTLNGH-KRGIACLQYR--DR------LVVSGSSDNTIRLWDIECGACLRVLEGHEEL 338 (435)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEE--TT------EEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEcCC-CCcEEEEEeC--CC------EEEEEeCCCeEEEEECCCCCEEEEEeCCcCc
Confidence 9999999999999999999998888754 4467788885 33 3566678999999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCce---------EEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 303 VSSFNVSADGKLLAVGTASGDISIIDSSSLQ---------VRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 303 i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
|.+++| ++++|++|+.||.|++||+.++. .+..+. +|.+.|.+++| ++++|++++.||+|++||+.
T Consensus 339 v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 339 VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-CCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc-CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 999999 68899999999999999997665 677775 89999999999 78899999999999999998
Q ss_pred CCcCCC
Q 015490 374 DKKKSG 379 (406)
Q Consensus 374 ~~~~~~ 379 (406)
+.....
T Consensus 414 ~~~~~~ 419 (435)
T 1p22_A 414 NDPAAQ 419 (435)
T ss_dssp ------
T ss_pred CCCCcc
Confidence 876543
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-31 Score=246.82 Aligned_cols=248 Identities=17% Similarity=0.201 Sum_probs=200.2
Q ss_pred CCceEEEEccCCCeEEEE-e-cCCeEEEEEecccccceeecceeccceeeecc-cccCcEEEEEECC-CCCEEEEeeCCC
Q 015490 114 DLPYRMAIHPHGDGIICA-L-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQL-ENVGQQLALTFDS-EGTIFAAGSENG 189 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~g~~l~~~~~dg 189 (406)
.....++++|+...++++ + ++.++||+++... . . ......+ .|.+.|.+++|+| ++++|++|+.||
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~-~-~--------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTG-R-V--------DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCE-E-C--------CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCC-C-C--------CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 344568899987766653 3 7888887764321 1 0 0112223 3558899999999 999999999999
Q ss_pred eEEEEeCCCc-------ceEeeeeccCCceeEEEEccCC-CEEEEEeCCCCEEEEEcCCCeeeeecc-cCCcceEEEEEE
Q 015490 190 NLRVFKWPSL-------EIILNESEAHASVKDLSFSPDG-KFLVSLGNRGPGRVWDLASSAVATPLA-KENDELFASCRF 260 (406)
Q Consensus 190 ~i~vwd~~~~-------~~~~~~~~~~~~i~~~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 260 (406)
.|++||+.++ +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+. ..+...+.+++|
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 184 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDW 184 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEE
Confidence 9999999887 5567778888899999999998 699999999999999999999988884 345667999999
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe-eecCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEECCCceE-
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK-QVVREP-VSSFNVSADGKLLAVG---TASGDISIIDSSSLQV- 334 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~-i~~~~~sp~~~~l~~~---~~dg~i~i~d~~~~~~- 334 (406)
+|++.. +++++.|+.|++||+++++.+..+ ..|.+. +.++.|+|++++|++| +.|+.|++||+++++.
T Consensus 185 ~~~~~~------l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 185 SRDGAL------ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp CTTSSC------EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC
T ss_pred CCCCCE------EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC
Confidence 999884 455678999999999999998888 677655 8999999999999999 7899999999988654
Q ss_pred EEEeecccccceEEEEEcCCCCeEEE-EECCCcEEEEEecCCcC
Q 015490 335 RTAVKKAHLGIVTALAFSYDSRALVS-ASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 335 ~~~~~~~~~~~v~~~~~sp~~~~l~s-~s~dg~i~iw~~~~~~~ 377 (406)
.......|...+.+++|+|++++|++ ++.||.|++|++.+++.
T Consensus 259 ~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 259 LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 33332257788999999999999975 55799999999998773
No 96
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.2e-31 Score=235.82 Aligned_cols=202 Identities=14% Similarity=0.144 Sum_probs=171.1
Q ss_pred ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC--cceEeeeeccCCceeEEEEcc--CCCEEEEEeCCCCEEEEEcCCC
Q 015490 166 NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPS--LEIILNESEAHASVKDLSFSP--DGKFLVSLGNRGPGRVWDLASS 241 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~--~~~~~~~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~ 241 (406)
|...|.+++|+|+|++|++|+.|++|++||+.+ .+.+..+.+|...|.+++|++ ++++|++++.|++|++||++++
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 558899999999999999999999999999974 356677888989999999986 3889999999999999999887
Q ss_pred e--eeeecccCCcceEEEEEEEcC--CCCceEEEEEEEcCCCcEEEEEeCCCce--EEEEeeecCCCeEEEEEcCC----
Q 015490 242 A--VATPLAKENDELFASCRFSPL--NNEDYVLYIAAITDRGASIVTWNTTTWK--RIRTKQVVREPVSSFNVSAD---- 311 (406)
Q Consensus 242 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~sp~---- 311 (406)
+ ....+.. +...+.+++|+|+ +. .+++++.|+.|++||+++.. ....+..|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~-h~~~v~~v~~~p~~~g~------~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 88 RWSQIAVHAV-HSASVNSVQWAPHEYGP------MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp CBCCCEEECC-CSSCEEEEEECCGGGCS------EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred ceEEEEEeec-CCCceeEEEeCcCCCCc------EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 4 3333433 4567999999997 44 45667889999999998753 24566788899999999997
Q ss_pred ---------CCEEEEEeCCCcEEEEECCCce----EEEEeecccccceEEEEEcCCC---CeEEEEECCCcEEEEEecCC
Q 015490 312 ---------GKLLAVGTASGDISIIDSSSLQ----VRTAVKKAHLGIVTALAFSYDS---RALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 312 ---------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~sp~~---~~l~s~s~dg~i~iw~~~~~ 375 (406)
+++|++|+.|+.|++||+++++ ....+. +|...|.+++|+|++ .+|++++.|++|++||++++
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 5799999999999999998755 455664 899999999999984 89999999999999999874
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-31 Score=244.05 Aligned_cols=245 Identities=14% Similarity=0.132 Sum_probs=198.3
Q ss_pred EEecCCCCce--EEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEE
Q 015490 108 ELRTDSDLPY--RMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAA 184 (406)
Q Consensus 108 ~~~~h~~~v~--~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 184 (406)
...+|...+. +++|++ ..+++++ ++.+++|+.+. +..... ....+...|.+++|+|++++|++
T Consensus 86 ~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~--~~~~~~----------~~~~~~~~v~~v~~s~~~~~l~~ 151 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADS--GSVSAL----------AETDESTYVASVKWSHDGSFLSV 151 (401)
T ss_dssp ECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTT--CCEEEE----------EECCTTCCEEEEEECTTSSEEEE
T ss_pred eCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCC--CcEeEe----------eecCCCCCEEEEEECCCCCEEEE
Confidence 3346766644 466654 4455554 88877776543 322211 11225678999999999999999
Q ss_pred eeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCC-CeeeeecccCCcceEEEEEEEcC
Q 015490 185 GSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLAS-SAVATPLAKENDELFASCRFSPL 263 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 263 (406)
|+.||.|++||+.+++.+..+..|...|.+++| ++++|++++.|+.|++||++. ......+.. +...+.+++|+|+
T Consensus 152 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~ 228 (401)
T 4aez_A 152 GLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSD 228 (401)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTT
T ss_pred ECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCC
Confidence 999999999999999999898888889999999 457999999999999999984 444555554 4567899999998
Q ss_pred CCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCC-CEEEEEe--CCCcEEEEECCCceEEEEeec
Q 015490 264 NNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADG-KLLAVGT--ASGDISIIDSSSLQVRTAVKK 340 (406)
Q Consensus 264 ~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~ 340 (406)
+. .+++++.|+.|++||+++++.+..+..|...|.+++|+|++ .++++++ .|+.|++||+.+++.+..+.
T Consensus 229 ~~------~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~- 301 (401)
T 4aez_A 229 GL------QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD- 301 (401)
T ss_dssp SS------EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-
T ss_pred CC------EEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-
Confidence 87 35667789999999999999999999999999999999976 4666654 69999999999999998885
Q ss_pred ccccceEEEEEcCCCCeEEEEE--CCCcEEEEEecCCcC
Q 015490 341 AHLGIVTALAFSYDSRALVSAS--MDSSVRVTVIEDKKK 377 (406)
Q Consensus 341 ~~~~~v~~~~~sp~~~~l~s~s--~dg~i~iw~~~~~~~ 377 (406)
+...|.+++|+|++++|++++ .||.|++|++.+++.
T Consensus 302 -~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 302 -AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred -CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc
Confidence 778899999999999999854 899999999988543
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-31 Score=246.53 Aligned_cols=252 Identities=12% Similarity=0.047 Sum_probs=198.6
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEeccccc---ceeecceecc-------------c----------e--------
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENT---EIRRLGVKIS-------------E----------K-------- 159 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~-------------~----------~-------- 159 (406)
.++.+++|+|+|++|+++.++.+++|++.. ++ .+..+..... . +
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQS--PNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEET--TTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCC--CCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 578999999999988887788877776643 33 2222111000 0 0
Q ss_pred -----------eeec-ccccCcEEEEEECCCCCEE-EEeeCCCeEEEEeCC--CcceEeeee--ccCCceeEEEEccCCC
Q 015490 160 -----------VLSQ-LENVGQQLALTFDSEGTIF-AAGSENGNLRVFKWP--SLEIILNES--EAHASVKDLSFSPDGK 222 (406)
Q Consensus 160 -----------~~~~-~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~vwd~~--~~~~~~~~~--~~~~~i~~~~~s~~~~ 222 (406)
.... -.+.+.|.+++|+|++++| ++++.||.|++||+. +++....+. .+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0000 0122479999999999996 899999999999998 787777665 4456899999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCeeee----ecccCCcceEEEEEEEcC---CCCceEEEEEEEcCCCcEEEEEeCCCceEEEE
Q 015490 223 FLVSLGNRGPGRVWDLASSAVAT----PLAKENDELFASCRFSPL---NNEDYVLYIAAITDRGASIVTWNTTTWKRIRT 295 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~ 295 (406)
+|++++.++.+++|++.+++... .+.. +...+.+++|+|+ ++ .+++++.|+.|++||+++++.+..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~------~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIKDSDGHQ------FIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEECTTSCE------EEEEEETTSCEEEEEESCTTCEEE
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcCCCCCCc------EEEEEcCCCcEEEEECCCCceeee
Confidence 99999999999999998876543 4443 4567999999999 65 355667899999999999888777
Q ss_pred -eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec------------------------ccccceEEEE
Q 015490 296 -KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK------------------------AHLGIVTALA 350 (406)
Q Consensus 296 -~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------------~~~~~v~~~~ 350 (406)
+..|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+.. .....|.+++
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 55788999999999 999999999999999999999998887752 1234689999
Q ss_pred EcCCCCeEEEEE-CCCcEEEEEe--cCC
Q 015490 351 FSYDSRALVSAS-MDSSVRVTVI--EDK 375 (406)
Q Consensus 351 ~sp~~~~l~s~s-~dg~i~iw~~--~~~ 375 (406)
|+|++++|++++ .|+.|++|++ .++
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 999999999999 8999999999 444
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.4e-29 Score=233.16 Aligned_cols=261 Identities=20% Similarity=0.219 Sum_probs=206.6
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeeccccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV 167 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
.+..|+.... +.+..+..|. .+.+++|+|+++++++++ ++.+++| +..+++ ....+..+
T Consensus 13 ~v~v~d~~~~----~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~--d~~~~~------------~~~~~~~~ 73 (391)
T 1l0q_A 13 NISVIDVTSN----KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSII--DTATNN------------VIATVPAG 73 (391)
T ss_dssp EEEEEETTTT----EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEE--ETTTTE------------EEEEEECS
T ss_pred EEEEEECCCC----eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEE--ECCCCe------------EEEEEECC
Confidence 5666776552 4556676665 489999999999886554 6665554 544333 33344455
Q ss_pred CcEEEEEECCCCCEEEE-eeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEE-EEEeCCCCEEEEEcCCCeeee
Q 015490 168 GQQLALTFDSEGTIFAA-GSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFL-VSLGNRGPGRVWDLASSAVAT 245 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~s~s~d~~i~iwd~~~~~~~~ 245 (406)
..+.+++|+|+++++++ ++.++.|++||+.+++....+.. +..+.+++|+|+++.+ ++++.++.|++||+.+++...
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 68999999999997754 45679999999999988766654 4578999999999977 677789999999999999888
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe---CCC
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT---ASG 322 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~dg 322 (406)
.+..+ ..+..++|+|+++. +++++..++.|++||+++++....+.. ...+.+++|+|++++|++++ .++
T Consensus 153 ~~~~~--~~~~~~~~~~dg~~-----l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 153 TVSVG--RSPKGIAVTPDGTK-----VYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEECC--SSEEEEEECTTSSE-----EEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred EEecC--CCcceEEECCCCCE-----EEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCC
Confidence 77654 33578999999985 445667889999999999988777764 46789999999999999888 689
Q ss_pred cEEEEECCCceEEEEeecccccceEEEEEcCCCCeE-EEEECCCcEEEEEecCCcCCCC
Q 015490 323 DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRAL-VSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 323 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
.|++||+.+++.+..+. .| ..+.+++|+|++++| ++++.|+.|++||+.+++.+..
T Consensus 225 ~v~~~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIP-VG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEETTTTEEEEEEE-CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEECCCCeEEEEEe-cC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 99999999999888886 44 457899999999887 6778899999999998776543
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-31 Score=266.81 Aligned_cols=191 Identities=16% Similarity=0.151 Sum_probs=149.7
Q ss_pred CEEEEeeCCCeEEEEeCCCcceEee-------eeccCC----------------------------------ceeEEEEc
Q 015490 180 TIFAAGSENGNLRVFKWPSLEIILN-------ESEAHA----------------------------------SVKDLSFS 218 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~~~~~~~-------~~~~~~----------------------------------~i~~~~~s 218 (406)
..+++++.||.|++||+.++..... +..|+. .+.+++|+
T Consensus 365 ~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~s 444 (902)
T 2oaj_A 365 GLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA 444 (902)
T ss_dssp SEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCC
T ss_pred eeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccc
Confidence 3677778888999999876643221 112222 34455667
Q ss_pred cCCCEEEEEeCCCCEEEEEcCCCeeee--ecc--------cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC
Q 015490 219 PDGKFLVSLGNRGPGRVWDLASSAVAT--PLA--------KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT 288 (406)
Q Consensus 219 ~~~~~l~s~s~d~~i~iwd~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~ 288 (406)
|++++|++++.|++|++||+.++.... .+. ..+...|.+++|+|+++ .+++++.|++|++||+.
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~------~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL------ELAVSIETGDVVLFKYE 518 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT------EEEEEETTSCEEEEEEE
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC------eEEEEecCcEEEEEEec
Confidence 899999999999999999998874211 010 14556799999999998 46777899999999987
Q ss_pred Cc---------------------------------------------eEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCc
Q 015490 289 TW---------------------------------------------KRIRTKQVVREPVSSFNVSADGKLLAVGTASGD 323 (406)
Q Consensus 289 ~~---------------------------------------------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~ 323 (406)
++ +++..+..|.+.|++++||||| +||+|+.|++
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 519 VNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp ECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred CccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 65 2466778899999999999999 9999999999
Q ss_pred EEEEECCCceEEEEee-----cccccceEEEEEc-----CCC---CeEEEEECCCcEEEEEe---cCCcC
Q 015490 324 ISIIDSSSLQVRTAVK-----KAHLGIVTALAFS-----YDS---RALVSASMDSSVRVTVI---EDKKK 377 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~s-----p~~---~~l~s~s~dg~i~iw~~---~~~~~ 377 (406)
|++||+++...+.... .+|...|++++|+ ||| ++|++|+.|++|++||+ .+++.
T Consensus 598 v~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 598 LMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcE
Confidence 9999998877654211 2788999999999 885 89999999999999999 66554
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.3e-30 Score=239.63 Aligned_cols=267 Identities=17% Similarity=0.205 Sum_probs=218.5
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVEN 146 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~ 146 (406)
+++.+++++..| .+..|+... .+.+..+.+|.+.|.+++|+ +..+++++ |+.+++|++.. +
T Consensus 128 ~g~~l~sg~~dg----------~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~--~ 189 (445)
T 2ovr_B 128 CGNRIVSGSDDN----------TLKVWSAVT----GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET--G 189 (445)
T ss_dssp ETTEEEEEETTS----------CEEEEETTT----CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--T
T ss_pred cCCEEEEEECCC----------cEEEEECCC----CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc--C
Confidence 456666654433 345555544 34678889999999999997 56788887 88888877642 2
Q ss_pred cceeecceeccceeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE
Q 015490 147 TEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV 225 (406)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 225 (406)
+ ....+. |...|.++.|+ ++.+++|+.||.|++||+.+++....+..|...|.+++| ++++++
T Consensus 190 ~------------~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 253 (445)
T 2ovr_B 190 E------------CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVV 253 (445)
T ss_dssp E------------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEE
T ss_pred c------------EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEE
Confidence 2 223333 45789999995 568999999999999999999999888888889999999 688999
Q ss_pred EEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEE
Q 015490 226 SLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSS 305 (406)
Q Consensus 226 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~ 305 (406)
+++.|+.|++||+++++....+..+ ...+.++.| ++. .+++++.|+.|++||+++++.+..+..|...+.+
T Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 324 (445)
T 2ovr_B 254 SGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGI------HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 324 (445)
T ss_dssp EEETTSCEEEEEGGGTEEEEEECCC-SSCEEEEEE--CSS------EEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE
T ss_pred EEcCCCEEEEEECCCCcEeEEecCC-CCceEEEEE--CCC------EEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE
Confidence 9999999999999999998888754 456888888 454 3566678999999999999999999999888888
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec--ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 306 FNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK--AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 306 ~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
+.++ ++++++|+.||.|++||+++++.+..+.. .|...|.+++|+ +++|++++.||.|++||+.+++.+..+
T Consensus 325 ~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 325 MELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 8875 67999999999999999999999888852 288899999996 579999999999999999998876554
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-30 Score=261.66 Aligned_cols=244 Identities=11% Similarity=0.082 Sum_probs=196.4
Q ss_pred EEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee
Q 015490 108 ELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS 186 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 186 (406)
...+|.+.|++++|+|++++|++|+ |+.++||+.. . .+....+.+...|.+++|+| |++|++++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~--~------------~~~~~~~~~~~~V~~l~fsp-g~~L~S~s 76 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQ--Q------------VEVVIKLEDRSAIKEMRFVK-GIYLVVIN 76 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECST--T------------CEEEEECSSCCCEEEEEEET-TTEEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCC--C------------cEEEEEcCCCCCEEEEEEcC-CCEEEEEE
Confidence 3458999999999999999999998 8888887532 1 22223344567899999999 88999999
Q ss_pred CCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeee----------ecccCCcceEE
Q 015490 187 ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVAT----------PLAKENDELFA 256 (406)
Q Consensus 187 ~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~----------~~~~~~~~~~~ 256 (406)
.|++|++||+++++.+..+. ++..|++++|+|++++|++++.||.|++||+++++... .....+...|.
T Consensus 77 ~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~ 155 (902)
T 2oaj_A 77 AKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIV 155 (902)
T ss_dssp TTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCC
T ss_pred CcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeE
Confidence 99999999999998887774 66789999999999999999999999999999887531 11123456789
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec------------------CCCeEEEEEcCCCCEEEEE
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV------------------REPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------------~~~i~~~~~sp~~~~l~~~ 318 (406)
+++|+|++.. .+++++.++.| +||+++++.+..+..| ...|.+++|+|+|++|+++
T Consensus 156 sl~~sp~~~~-----~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 156 SIQWNPRDIG-----TVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp EEEEETTEEE-----EEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred EEEEccCCCC-----EEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 9999997643 45667889999 9999999988888765 4679999999999999999
Q ss_pred eCCCcEEEEECCCceEEEE--ee--cc-------------cccceEEEEEc----CCC-CeEEEEECC-----CcEEEEE
Q 015490 319 TASGDISIIDSSSLQVRTA--VK--KA-------------HLGIVTALAFS----YDS-RALVSASMD-----SSVRVTV 371 (406)
Q Consensus 319 ~~dg~i~i~d~~~~~~~~~--~~--~~-------------~~~~v~~~~~s----p~~-~~l~s~s~d-----g~i~iw~ 371 (406)
+.||.|++||+++++.+.. +. .. |..+|.+++|+ |++ .+|++|+.| ..+.+|+
T Consensus 230 s~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 230 HEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp ETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred ECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 9999999999999887653 21 01 34579999995 443 567777766 3799998
Q ss_pred ec
Q 015490 372 IE 373 (406)
Q Consensus 372 ~~ 373 (406)
+.
T Consensus 310 ~~ 311 (902)
T 2oaj_A 310 LG 311 (902)
T ss_dssp EE
T ss_pred cC
Confidence 63
No 103
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-31 Score=245.70 Aligned_cols=246 Identities=13% Similarity=0.078 Sum_probs=169.6
Q ss_pred CCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccc-cCcEEEEEECC--------CCCE
Q 015490 112 DSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLEN-VGQQLALTFDS--------EGTI 181 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~--------~g~~ 181 (406)
|...+....+.+++.++++++ |++++||+.+..... ....+..+.+ .+.|++++|+| |+++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~ 158 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---------TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQV 158 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEE---------EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---------eeeeecccCCCCCceEEEEEccccccccCCCCCE
Confidence 344444444555666788887 999999987753211 1123334444 48899999997 8899
Q ss_pred EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEEEeCCCCEEEEEcCCCeeeeecc------------
Q 015490 182 FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVSLGNRGPGRVWDLASSAVATPLA------------ 248 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~------------ 248 (406)
||+|+.|++|+|||+.++.....+..|+..|.+++|+|++. +|++++.|++|++||+++++......
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred EEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 99999999999999998888888888999999999999875 79999999999999998876543221
Q ss_pred ------------cCCcceEEEEEEE-cCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEE--------
Q 015490 249 ------------KENDELFASCRFS-PLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFN-------- 307 (406)
Q Consensus 249 ------------~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~-------- 307 (406)
..+...+.++.|+ ++++ .+++++.|+.+++||+.+++....+..+...+..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~------~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGS------GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGI 312 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTC------EEEEECTTSEEEEEEC-------------------CCSCSEEEE
T ss_pred cccccceeeeecccccccceeeeeecCCCC------EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccc
Confidence 1233456678887 5666 356678899999999998776666655544443333
Q ss_pred ----------EcC--CCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 308 ----------VSA--DGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 308 ----------~sp--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
|+| ++.++++|+.||.|++||+.+++....+. .|..+|.+++|+|||++||+++.|| +.+|.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 333 34467788889999999999988877775 7889999999999999999998766 77787754
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-29 Score=236.81 Aligned_cols=250 Identities=15% Similarity=0.227 Sum_probs=207.9
Q ss_pred EEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccC
Q 015490 91 LSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVG 168 (406)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 168 (406)
+..|+... .+.+..+.+|...|.+++|+ +..+++++ ++.+++|+... ++ .+..+. +..
T Consensus 181 i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~--~~------------~~~~~~~~~~ 240 (445)
T 2ovr_B 181 LKVWNAET----GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET--GQ------------CLHVLMGHVA 240 (445)
T ss_dssp EEEEETTT----TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS--CC------------EEEEEECCSS
T ss_pred EEEEECCc----CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC--Cc------------EEEEEcCCcc
Confidence 45556554 24678899999999999996 46788777 88888876542 22 222222 457
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
.+.+++| +++++++|+.||.|++||+++++.+..+..|...|.+++| ++.++++++.|+.|++||+++++....+.
T Consensus 241 ~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 241 AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp CEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 8999999 7889999999999999999999999888888889999999 78899999999999999999999988887
Q ss_pred cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee---cCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 015490 249 KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV---VREPVSSFNVSADGKLLAVGTASGDIS 325 (406)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~dg~i~ 325 (406)
.+. ..+.++.++ +. .+++++.|+.|++||+++++.+..+.. |...|.+++|+ +++|++|+.||.|+
T Consensus 317 ~~~-~~v~~~~~~--~~------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 317 GHQ-SLTSGMELK--DN------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVK 385 (445)
T ss_dssp CCC-SCEEEEEEE--TT------EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred CCc-ccEEEEEEe--CC------EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEE
Confidence 654 456666664 33 345667899999999999999998886 77889999996 67999999999999
Q ss_pred EEECCCceEEEEee----cccccceEEEEEcCCCCeEEEEECCCc----EEEEEecCC
Q 015490 326 IIDSSSLQVRTAVK----KAHLGIVTALAFSYDSRALVSASMDSS----VRVTVIEDK 375 (406)
Q Consensus 326 i~d~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~s~s~dg~----i~iw~~~~~ 375 (406)
+||+.+++.+..+. ..|.+.|.+++|+|++.++++|+.||+ |.+||++..
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999888772 267889999999999999999999998 999999764
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.7e-31 Score=244.81 Aligned_cols=245 Identities=12% Similarity=0.126 Sum_probs=187.5
Q ss_pred EecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccce-------eec-----------cee-ccceeeecccccC
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEI-------RRL-----------GVK-ISEKVLSQLENVG 168 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~-------~~~-----------~~~-~~~~~~~~~~~~~ 168 (406)
-+.-...|.+++|+|||+++++++ |++++ + ....+.+ ..+ .+. ........+.+..
T Consensus 11 ~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d--~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDGTLYLTTFPDISIG--Q--PKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVC 86 (588)
T ss_dssp SCCCSSSSCCEEECTTSCEEEECSSSEEEE--E--ECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSC
T ss_pred HhHhhccEEEEEECCCCCEEEEEcCCceee--c--ccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCC
Confidence 344568889999999999888887 66665 2 2222211 011 110 0111223334567
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCC-----ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHA-----SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV 243 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 243 (406)
.|.+++|||||++||+++.||+|++||.+. .+..+. |+. .|.+++|||||++|++++.||+|++||+.++..
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 899999999999999999999999999544 444444 554 499999999999999999999999999998752
Q ss_pred -------eeecc---cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceE---EEEee-ecCCCeEEEEEc
Q 015490 244 -------ATPLA---KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKR---IRTKQ-VVREPVSSFNVS 309 (406)
Q Consensus 244 -------~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~---~~~~~-~~~~~i~~~~~s 309 (406)
+..+. ..|...|.+++|+|++ - ++++.|+.|++||+.+++. ..++. .|...|.+++|+
T Consensus 164 ~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-L-------aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-L-------VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp TCCCCEEEEEEECSCTTCCCCEEEEEEETTE-E-------EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred ccccceeeeeeecccccccccEEEEEEcCCc-E-------EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 44542 3345789999999987 3 3445699999999988773 34563 677889999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEE--cCCCCeEEEEECCCcEEEEEec
Q 015490 310 ADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAF--SYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 310 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
|+.||+++ ++.|++||+.+++...... +|...|..+.| +|++..|++++.||+ ++|..+
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred --CCEEEEEe-CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 68999987 6999999999887744443 79999999999 999999999999999 999986
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=8.6e-30 Score=237.98 Aligned_cols=237 Identities=19% Similarity=0.304 Sum_probs=199.3
Q ss_pred eeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCCEEE
Q 015490 106 VAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGTIFA 183 (406)
Q Consensus 106 ~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~ 183 (406)
+....+|...|.++++ +++++++++ ++.+++|+... ++ ....+. |...|.+++| ++++|+
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~--~~------------~~~~~~~h~~~v~~l~~--~~~~l~ 187 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT--LE------------CKRILTGHTGSVLCLQY--DERVII 187 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS--CC------------EEEEECCCSSCEEEEEC--CSSEEE
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC--Ce------------EEEEEcCCCCcEEEEEE--CCCEEE
Confidence 3344567778988887 788999887 88888876542 22 222333 4578999999 788999
Q ss_pred EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee---eecccCCcceEEEEEE
Q 015490 184 AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA---TPLAKENDELFASCRF 260 (406)
Q Consensus 184 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~ 260 (406)
+|+.||+|++||+.+++....+..|...|.+++|++ ..+++++.|+.|++||+++++.. ..+. .+...+.+++|
T Consensus 188 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~ 264 (435)
T 1p22_A 188 TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDF 264 (435)
T ss_dssp EEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEe
Confidence 999999999999999999999988888999999974 59999999999999999987655 3333 45567888888
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK 340 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 340 (406)
+++ .+++++.|+.|++||+++++.+..+..|...+.++.++ ++++++|+.||.|++||+++++.+..+.
T Consensus 265 --~~~------~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~- 333 (435)
T 1p22_A 265 --DDK------YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE- 333 (435)
T ss_dssp --ETT------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC-
T ss_pred --CCC------EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEe-
Confidence 444 35666789999999999999999999999999999984 7899999999999999999999999886
Q ss_pred ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 341 AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 341 ~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+|...|.+++| ++.+|++|+.||.|++||+.+++
T Consensus 334 ~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 334 GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 89999999999 78899999999999999997765
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.8e-31 Score=237.61 Aligned_cols=233 Identities=8% Similarity=0.050 Sum_probs=182.5
Q ss_pred EEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-
Q 015490 120 AIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWP- 197 (406)
Q Consensus 120 ~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~- 197 (406)
.+.+++..+++|+ |+.+++|++.. ++....+ . ...|.++.|+|+ +++++.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~--~~~~~~~------------~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~ 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKD--SKTITTI------------T-TPNPRTGGEHPA---IISRGPCNRLLLLYPGN 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESS--SSCEEEE------------E-EECCCTTCCCCS---EEEECSTTEEEEEETTT
T ss_pred hhcCCCCEEEEECCCCcEEEEECCC--CcEEEEE------------e-cCCceeeeeCCc---eEEecCCCeEEEEEccC
Confidence 3446778888887 88888887653 3222221 1 345667788887 8999999999999765
Q ss_pred --------CcceEeeee-ccCCceeEEEEcc--CCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCC
Q 015490 198 --------SLEIILNES-EAHASVKDLSFSP--DGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNE 266 (406)
Q Consensus 198 --------~~~~~~~~~-~~~~~i~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (406)
+++.+.... .|...|.+++|+| +++++++++.|++|++||+++++.......++...+.+++|+|++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~- 183 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL- 183 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-
Confidence 444344443 4446899999999 9999999999999999999999887766556666689999999998
Q ss_pred ceEEEEEEEcCCCcEEEEEeCCCceEE-EEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec--cc
Q 015490 267 DYVLYIAAITDRGASIVTWNTTTWKRI-RTKQV-VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK--AH 342 (406)
Q Consensus 267 ~~~l~~~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~ 342 (406)
++++++.|+.|++||+++++.+ ..+.. |...|.+++|+|++++|++++ ++.|++||+++.+....+.. .|
T Consensus 184 -----~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~ 257 (343)
T 3lrv_A 184 -----LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP 257 (343)
T ss_dssp -----EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-
T ss_pred -----EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc
Confidence 4677789999999999999877 77887 899999999999999999999 55999999998876554431 13
Q ss_pred ccceE--EEEEcCCCCeEEEEEC-CCcEEEEEecCCcC
Q 015490 343 LGIVT--ALAFSYDSRALVSASM-DSSVRVTVIEDKKK 377 (406)
Q Consensus 343 ~~~v~--~~~~sp~~~~l~s~s~-dg~i~iw~~~~~~~ 377 (406)
...+. +++|+|+|++|++++. |+.|++|++.+..+
T Consensus 258 ~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 258 EFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp ----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred cccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 34444 6999999999999998 99999999976544
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=8e-29 Score=231.14 Aligned_cols=259 Identities=17% Similarity=0.175 Sum_probs=203.4
Q ss_pred EEEEecCCCCccc-cceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccc-cc
Q 015490 91 LSHFDFASNSLSD-QPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NV 167 (406)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (406)
+..|+........ .....+.+|...|.+++|+|++..+++++ ++.+++|+.+ +++. ...+. +.
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~--~~~~------------~~~~~~~~ 211 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK--TLAY------------KATVDLTG 211 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT--TCCE------------EEEEECSS
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC--CceE------------EEEEcCCC
Confidence 5566665433211 11114568999999999999999888876 6776666543 3222 22222 44
Q ss_pred CcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe--------CCCCEEEEEc
Q 015490 168 GQQLALTFDSEGTIFA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG--------NRGPGRVWDL 238 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s--------~d~~i~iwd~ 238 (406)
..+.+++|+|+++.++ +++.|+.|++||+++++....+.. ...+.+++|+|+++++++++ .|+.|++||+
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 6799999999998875 455799999999999888766554 44699999999999999888 4889999999
Q ss_pred CCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEE
Q 015490 239 ASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 318 (406)
++++....+.. ...+..++|+|+++. +++++..++.|++||+.+++.+..+. +...+.+++|+|+|++++++
T Consensus 291 ~~~~~~~~~~~--~~~~~~~~~~~~g~~-----l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 291 DKEKLIDTIGP--PGNKRHIVSGNTENK-----IYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp TTTEEEEEEEE--EECEEEEEECSSTTE-----EEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEE
T ss_pred CCCcEEeeccC--CCCcceEEECCCCCE-----EEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEE
Confidence 99887776532 335778999999985 55666789999999999998887776 55779999999999999988
Q ss_pred eC---------------CCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEEC-CCcEEEEEecC
Q 015490 319 TA---------------SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASM-DSSVRVTVIED 374 (406)
Q Consensus 319 ~~---------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~-dg~i~iw~~~~ 374 (406)
+. ||.|++||+.+++.+..+. +...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE--AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ecCCCccccccccccccceEEEEEECCCCcEEEEec--CCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 76 4699999999999988886 3567899999999999988875 99999999864
No 109
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=7.5e-29 Score=223.48 Aligned_cols=247 Identities=16% Similarity=0.195 Sum_probs=185.4
Q ss_pred CcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEeccccc
Q 015490 69 NYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENT 147 (406)
Q Consensus 69 ~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~ 147 (406)
+++++.++..+ .+.++.+.... .....+...+.+|...|.+++|+|++++|++++ |+.+++|........
T Consensus 51 ~~~l~S~s~D~--------~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 51 PDMILSASRDK--------TIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp TTEEEEEETTS--------CEEEEEECCSS-SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEcCCC--------eEEEEECCCCC-cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccccee
Confidence 45666554322 34555554432 222346778999999999999999999999987 777777664432111
Q ss_pred ceee-----------------------------cceeccceeee-cccccCcEEEEEECCCC--CEEEEeeCCCeEEEEe
Q 015490 148 EIRR-----------------------------LGVKISEKVLS-QLENVGQQLALTFDSEG--TIFAAGSENGNLRVFK 195 (406)
Q Consensus 148 ~~~~-----------------------------~~~~~~~~~~~-~~~~~~~v~~~~~s~~g--~~l~~~~~dg~i~vwd 195 (406)
.... ........... ...+...+.+++|++++ .++++++.|+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 1000 00000011111 12234678999999865 5788999999999999
Q ss_pred CCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEE
Q 015490 196 WPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAI 275 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 275 (406)
+++++....+.+|...|++++|+|++++|++++.|+.|++||+++.+.+..+..+ ..+.++.|+|++.. + +
T Consensus 202 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~-----~--~ 272 (340)
T 4aow_A 202 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYW-----L--C 272 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSSE-----E--E
T ss_pred CCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCce-----e--e
Confidence 9999999999889899999999999999999999999999999999988877643 46889999998752 2 2
Q ss_pred cCCCcEEEEEeCCCceEEEEee---------ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce
Q 015490 276 TDRGASIVTWNTTTWKRIRTKQ---------VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ 333 (406)
Q Consensus 276 ~~~~~~i~~~d~~~~~~~~~~~---------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~ 333 (406)
++.|+.|++||++++..+..+. .|...|.+++|+|+|++|++|+.||.|+|||+.+|+
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 3458999999999887766553 467789999999999999999999999999999875
No 110
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=6.7e-29 Score=224.04 Aligned_cols=253 Identities=15% Similarity=0.112 Sum_probs=190.4
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEcc--CCCeEEEEe-cCCeEEEEEecc
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHP--HGDGIICAL-QNSCRLFEWDEV 144 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~~~~-~~~~~i~~~~~~ 144 (406)
+++++++++..| .+.++ +........+....+.+|...|.+++|+| ++.+|++++ |+.+++|+++..
T Consensus 22 ~~~~l~~~~~dg--------~i~iw--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSDQ--------HIKVF--KLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETTS--------EEEEE--EECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEeeCCC--------eEEEE--ECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 666777664332 34444 44433322356778899999999999999 689999988 899999988754
Q ss_pred cccceeecceeccceeeecc-cccCcEEEEEECCC--CCEEEEeeCCCeEEEEeCCCcceEeeee-------------cc
Q 015490 145 ENTEIRRLGVKISEKVLSQL-ENVGQQLALTFDSE--GTIFAAGSENGNLRVFKWPSLEIILNES-------------EA 208 (406)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~--g~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------~~ 208 (406)
....... ..+....+ .+...|.+++|+|+ +++|++++.||.|++||+++++.+..+. .+
T Consensus 92 ~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGR-----RWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSC-----SEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ccccccc-----CcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 3211000 11223333 34588999999999 9999999999999999998876543332 45
Q ss_pred CCceeEEEEccC---CCEEEEEeCCCCEEEEEcCCCee--eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEE
Q 015490 209 HASVKDLSFSPD---GKFLVSLGNRGPGRVWDLASSAV--ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIV 283 (406)
Q Consensus 209 ~~~i~~~~~s~~---~~~l~s~s~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~ 283 (406)
...+.+++|+|+ +.++++++.++.+.+|+...++. ...+.. +...+.+++|+|++.... -++++++.|+.|+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~--~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWY--QLIATGCKDGRIR 243 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSS--EEEEEEETTSCEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEEECCCCCCcc--eEEEEEcCCCeEE
Confidence 558999999997 89999999999998888877765 444544 456799999999983100 0456678899999
Q ss_pred EEeCCCc----------------------------------------------eEEEEeeecCCCeEEEEEcCCCCEEEE
Q 015490 284 TWNTTTW----------------------------------------------KRIRTKQVVREPVSSFNVSADGKLLAV 317 (406)
Q Consensus 284 ~~d~~~~----------------------------------------------~~~~~~~~~~~~i~~~~~sp~~~~l~~ 317 (406)
+||++++ +.+..+..|...|.+++|+|++++|++
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence 9999864 566777788899999999999999999
Q ss_pred EeCCCcEEEEECCCceEEEEe
Q 015490 318 GTASGDISIIDSSSLQVRTAV 338 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~ 338 (406)
++.||.|++||+.+++....+
T Consensus 324 ~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 324 AGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EETTSCEEEEEECTTSCEEEE
T ss_pred ecCCCcEEEEecCcCcchhhe
Confidence 999999999999987655444
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=8.2e-31 Score=234.25 Aligned_cols=204 Identities=16% Similarity=0.156 Sum_probs=168.7
Q ss_pred ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEcc--CCCEEEEEeCCCCEEEEEcCCC
Q 015490 166 NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSP--DGKFLVSLGNRGPGRVWDLASS 241 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~ 241 (406)
|.+.|++++|+|+|++|++|+.|++|++||+.+++ .+..+.+|...|.+++|++ ++++|++++.|++|++||++++
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 55899999999999999999999999999998764 4566778888999999986 4889999999999999999887
Q ss_pred e--eeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceE---EEEeeecCCCeEEEEEcCC-----
Q 015490 242 A--VATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKR---IRTKQVVREPVSSFNVSAD----- 311 (406)
Q Consensus 242 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~i~~~~~sp~----- 311 (406)
+ ....+.. +...+.+++|+|+... .++++++.|+.|++||++.... ...+..|...+.+++|+|+
T Consensus 92 ~~~~~~~~~~-h~~~V~~v~~~p~~~g----~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 92 TWEKSHEHAG-HDSSVNSVCWAPHDYG----LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCCEEEEECC-CSSCCCEEEECCTTTC----SCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred cceEEEEccC-CCCceEEEEECCCCCC----cEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 4 3444443 4556889999998321 1467788999999999987532 3345567788999999997
Q ss_pred ------------CCEEEEEeCCCcEEEEECCCc---eEEEEeecccccceEEEEEcCCC----CeEEEEECCCcEEEEEe
Q 015490 312 ------------GKLLAVGTASGDISIIDSSSL---QVRTAVKKAHLGIVTALAFSYDS----RALVSASMDSSVRVTVI 372 (406)
Q Consensus 312 ------------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~sp~~----~~l~s~s~dg~i~iw~~ 372 (406)
+++|++|+.|+.|++||++.. +....+. +|...|.+++|+|++ ++|++++.|++|++|++
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 478999999999999999754 4555664 899999999999986 78999999999999999
Q ss_pred cCC
Q 015490 373 EDK 375 (406)
Q Consensus 373 ~~~ 375 (406)
++.
T Consensus 246 ~~~ 248 (316)
T 3bg1_A 246 DDA 248 (316)
T ss_dssp SST
T ss_pred cCc
Confidence 873
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=229.21 Aligned_cols=203 Identities=14% Similarity=0.162 Sum_probs=175.0
Q ss_pred ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC--CcceEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCC
Q 015490 166 NVGQQLALTFDSEGTIFAAGSENGNLRVFKWP--SLEIILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASS 241 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~ 241 (406)
|...|.+++|+|++++|++|+.||.|++||+. +++....+..|...|++++|+++ +++|++++.|+.|++||+.++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 45889999999999999999999999999997 56667777888889999999977 899999999999999999998
Q ss_pred e--eeeecccCCcceEEEEEEEcC--CCCceEEEEEEEcCCCcEEEEEeCCCce--EEEEeeecCCCeEEEEEcC-----
Q 015490 242 A--VATPLAKENDELFASCRFSPL--NNEDYVLYIAAITDRGASIVTWNTTTWK--RIRTKQVVREPVSSFNVSA----- 310 (406)
Q Consensus 242 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~sp----- 310 (406)
+ ....+.. +...+.+++|+|+ +. .+++++.++.|++||+++.. ....+..|...|.+++|+|
T Consensus 90 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~------~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 90 RWSQIAVHAV-HSASVNSVQWAPHEYGP------LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEEEEECC-CSSCEEEEEECCGGGCS------EEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred ceeEeeeecC-CCcceEEEEeCCCCCCC------EEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 7 4455543 4567999999999 66 35666789999999998873 4556677889999999999
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCce----EEEEeecccccceEEEEEcCC---CCeEEEEECCCcEEEEEecCC
Q 015490 311 --------DGKLLAVGTASGDISIIDSSSLQ----VRTAVKKAHLGIVTALAFSYD---SRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 311 --------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~sp~---~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+++++++++.||.|++||++++. ....+. +|...|.+++|+|+ +++|++++.||.|++||++++
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 69999999999999999997654 334553 79999999999999 899999999999999999986
Q ss_pred c
Q 015490 376 K 376 (406)
Q Consensus 376 ~ 376 (406)
+
T Consensus 242 ~ 242 (379)
T 3jrp_A 242 Q 242 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=8.7e-29 Score=228.63 Aligned_cols=241 Identities=10% Similarity=0.060 Sum_probs=164.2
Q ss_pred cCCCCceEEEEcc-CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEe
Q 015490 111 TDSDLPYRMAIHP-HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAG 185 (406)
Q Consensus 111 ~h~~~v~~~~~sp-~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~ 185 (406)
+|...|.+++|+| ++.++++++ ++.+++|+++. .+....+.+...+.++.|++. +.+++++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT--------------LQTADVFNFEETVYSHHMSPVSTKHCLVAVG 162 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT--------------TEEEEEEECSSCEEEEEECSSCSSCCEEEEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC--------------CccceeccCCCceeeeEeecCCCCCcEEEEE
Confidence 5999999999999 677888887 78888876542 233344456678899999984 4599999
Q ss_pred eCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCC-EEEEEeCCCCEEEEEcCCCe-eeeecc--------------c
Q 015490 186 SENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGK-FLVSLGNRGPGRVWDLASSA-VATPLA--------------K 249 (406)
Q Consensus 186 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~-~~~~~~--------------~ 249 (406)
+.||.|++||+++++....+..|...|.+++|+|+++ .|++++.|+.|++||++++. ....+. .
T Consensus 163 ~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T 4a11_B 163 TRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT 242 (408)
T ss_dssp ESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred cCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence 9999999999999998888888888999999999998 58899999999999998765 222221 2
Q ss_pred CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC----------------------------------------
Q 015490 250 ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT---------------------------------------- 289 (406)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~---------------------------------------- 289 (406)
.+...+.+++|+|+++. +++++.|+.|++||+++
T Consensus 243 ~~~~~v~~~~~~~~~~~------l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLH------LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp SCSSCEEEEEECTTSSE------EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred cccCceeEEEEcCCCCE------EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence 35567899999999873 44556677777777654
Q ss_pred -------ceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcC-CCCeEEEE
Q 015490 290 -------WKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSY-DSRALVSA 361 (406)
Q Consensus 290 -------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~ 361 (406)
++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+.... .+. ....+.+ +...+.+.
T Consensus 317 ~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~ 392 (408)
T 4a11_B 317 AVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD-ETT---TKSQLNPAFEDAWSSS 392 (408)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------------------
T ss_pred EEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC-ceE---eccccccccceeeccc
Confidence 35566777788999999999999999999999999999999988776553 221 1122333 33445677
Q ss_pred ECCCcEEEEEecCC
Q 015490 362 SMDSSVRVTVIEDK 375 (406)
Q Consensus 362 s~dg~i~iw~~~~~ 375 (406)
+.|+.+++|+....
T Consensus 393 ~~~~~~~~W~~~~~ 406 (408)
T 4a11_B 393 DEEGGTSAWSHPQF 406 (408)
T ss_dssp --------------
T ss_pred CccCceeecCCccc
Confidence 78999999987643
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=6.3e-29 Score=231.03 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=195.9
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVF 194 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vw 194 (406)
.+..|+|+++ ..|++|.|++++||+.. +++....+ ....+...|++++|+|+|++|++|+.||+|++|
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~--tg~~~~~~---------~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iW 174 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSAS--SGDILQLL---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLW 174 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETT--TCCEEEEE---------ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECC--CCCEEEEE---------EecCCCCcEEEEEECCCCCEEEEEECCCeEEEE
Confidence 3678999986 47777779988886644 33322221 112244679999999999999999999999999
Q ss_pred eCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee-eecccCCcceEEEEEEEcCCCCceEEEEE
Q 015490 195 KWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA-TPLAKENDELFASCRFSPLNNEDYVLYIA 273 (406)
Q Consensus 195 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (406)
|+++++.+..+.+|...+.+++|+ +..|++++.|+.+++||....... ..+. .+...+..+.|+|++.. +
T Consensus 175 d~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~------l 245 (420)
T 4gga_A 175 DVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRH------L 245 (420)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSE------E
T ss_pred EcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCe------e
Confidence 999999999999988889888875 679999999999999999875544 3444 45566889999999983 5
Q ss_pred EEcCCCcEEEEEeCCCce----EEEEeeecCCCeEEEEEcCCC-CEEEEE--eCCCcEEEEECCCceEEEEeecccccce
Q 015490 274 AITDRGASIVTWNTTTWK----RIRTKQVVREPVSSFNVSADG-KLLAVG--TASGDISIIDSSSLQVRTAVKKAHLGIV 346 (406)
Q Consensus 274 ~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~i~~~~~sp~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~v 346 (406)
++++.|+.+++||..+++ .+.....|...|.+++|+|++ .+++++ +.|+.|++||+.+++....+. +...+
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v 323 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQV 323 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCE
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccce
Confidence 677889999999998764 345667788899999999965 455554 469999999999999998885 55679
Q ss_pred EEEEEcCCCCeEEEEE--CCCcEEEEEecCCcCCCCc
Q 015490 347 TALAFSYDSRALVSAS--MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 347 ~~~~~sp~~~~l~s~s--~dg~i~iw~~~~~~~~~~~ 381 (406)
.++.|+|+++.+++++ .|+.|+|||+.+++.+..+
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred eeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence 9999999999998776 7899999999998876544
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=227.44 Aligned_cols=259 Identities=13% Similarity=0.138 Sum_probs=187.0
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeec--ccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQ--LEN 166 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 166 (406)
.+..|+.... +.+..+. ...|.++.|+|+ +++++ |+.+++|+.+.. ....... ..+.+.. ..+
T Consensus 59 ~v~iwd~~~~----~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~----~~~~~~~-~~~~~~~~~~~~ 124 (343)
T 3lrv_A 59 ALHFTQLKDS----KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQ----ITILDSK-TNKVLREIEVDS 124 (343)
T ss_dssp EEEEEEESSS----SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTE----EEEEETT-TCCEEEEEECCC
T ss_pred cEEEEECCCC----cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCc----eEEeecC-CcceeEEeecCC
Confidence 4555565543 2444444 567888899998 66666 888888764421 1001110 1121222 234
Q ss_pred cCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee
Q 015490 167 VGQQLALTFDS--EGTIFAAGSENGNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV 243 (406)
Q Consensus 167 ~~~v~~~~~s~--~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~ 243 (406)
...|.+++|+| +++++++++.||+|++||+++++.......++. .|.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 47899999999 999999999999999999999988665544444 899999999999999999999999999999988
Q ss_pred e-eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee---cCCCe--EEEEEcCCCCEEEE
Q 015490 244 A-TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV---VREPV--SSFNVSADGKLLAV 317 (406)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~i--~~~~~sp~~~~l~~ 317 (406)
. ..+...|...+.+++|+|++.. +++++ ++.|++||+++.+.+..+.. +...+ .+++|+|+|++|++
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~------l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYW------MVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSE------EEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CccEEeccCCCCEEEEEEeCCCCE------EEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 7 6676645678999999999984 33334 44999999998876544432 22233 46999999999999
Q ss_pred EeC-CCcEEEEECCCceEEEEeecccccceEEEEEcC---CCCeEEEEECCCcEEEEEecC
Q 015490 318 GTA-SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSY---DSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 318 ~~~-dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~s~s~dg~i~iw~~~~ 374 (406)
++. |+.|++|++.+....... .++..++|.+ +.+.+++++.|+.+.++-...
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred ecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 998 999999999765432221 4677888888 888999999999998886543
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.8e-29 Score=229.62 Aligned_cols=222 Identities=11% Similarity=0.122 Sum_probs=173.0
Q ss_pred cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccC-----cEEEEEECCCCCEEEE
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG-----QQLALTFDSEGTIFAA 184 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~ 184 (406)
.|...|.+++|||+|..|++++ ++.++||+.+. .+..+.++. .+.+++|||||++||+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----------------~l~~l~~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----------------MLTNLDSKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----------------EEEECCCSSCSTTTCEEEEEECSSSSCEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------------eeeeccCCCccccccEEEEEEcCCCCEEEE
Confidence 5688999999999999999988 99999986211 222233222 5999999999999999
Q ss_pred eeCCCeEEEEeCCCcce-------Eeee----eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee---eecccC
Q 015490 185 GSENGNLRVFKWPSLEI-------ILNE----SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA---TPLAKE 250 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~-------~~~~----~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~~ 250 (406)
|+.||+|++||+.++.. +..+ .+|...|.+++|+||| +++++.|+++++||+.++... ..+...
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccc
Confidence 99999999999988752 4444 4555699999999999 888999999999999887732 345434
Q ss_pred CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEE--cCCCCEEEEEeCCCcEEEEE
Q 015490 251 NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNV--SADGKLLAVGTASGDISIID 328 (406)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~--sp~~~~l~~~~~dg~i~i~d 328 (406)
+...|.+++|+ +. .+++++ ++.|++||+.+++......+|...+..+.| +|++..|+++++||+ ++|.
T Consensus 225 h~~~V~svaFs--g~------~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 225 SRRKITDLKIV--DY------KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp CSSCCCCEEEE--TT------EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred ccCcEEEEEEE--CC------EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 55678899999 44 234444 589999999988774444478899999999 999999999999999 9998
Q ss_pred CCCce-----------------------EEEEeecccccceEEEEEcCCCCeEEEEE
Q 015490 329 SSSLQ-----------------------VRTAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 329 ~~~~~-----------------------~~~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
.+.-. ....+ .+...|.+++|||||+.+|+++
T Consensus 295 ~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~--~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 295 EDELHVTADNIIAPYLEKKFKKWSTIWNEFNNY--ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSS--CCEEEEEEEEECTTSSEEEEEE
T ss_pred eccEEECCCceEEEEcCCEEEEEECCCCceeee--ccceEEEEEEECCCCCEEEEEE
Confidence 75211 11111 1245589999999999999886
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.6e-29 Score=232.64 Aligned_cols=208 Identities=14% Similarity=0.236 Sum_probs=176.7
Q ss_pred eecccccCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCC----------cceEeeeeccCCceeEEEEccCCC-EEEEEe
Q 015490 161 LSQLENVGQQLALTFDSE-GTIFAAGSENGNLRVFKWPS----------LEIILNESEAHASVKDLSFSPDGK-FLVSLG 228 (406)
Q Consensus 161 ~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~vwd~~~----------~~~~~~~~~~~~~i~~~~~s~~~~-~l~s~s 228 (406)
...+.|.+.|++++|+|+ +.+|++++.||.|++||+.+ ......+..|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445667789999999997 68999999999999999976 566677778888999999999988 999999
Q ss_pred CCCCEEEEEcCCCee-------eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc---eEEEEeee
Q 015490 229 NRGPGRVWDLASSAV-------ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW---KRIRTKQV 298 (406)
Q Consensus 229 ~d~~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~---~~~~~~~~ 298 (406)
.||.|++||+.++.. ...+. .+...+.+++|+|++.. ++++++.++.|++||+++. +.+..+..
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~-----~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHES-----LFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTT-----EEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred CCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCC-----EEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999987432 22232 35567999999997665 5667778999999999987 56777788
Q ss_pred cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCC-ceEEEEeecccccceEEEEEcCCCC-eEEEEECCCcEEEEEecCC
Q 015490 299 VREPVSSFNVSADGK-LLAVGTASGDISIIDSSS-LQVRTAVKKAHLGIVTALAFSYDSR-ALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 299 ~~~~i~~~~~sp~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s~dg~i~iw~~~~~ 375 (406)
|...|.+++|+|++. ++++|+.||.|++||+++ ...+..+. .|...|.+++|+|+++ +|++++.|+.|++||+...
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 889999999999987 688999999999999998 45666665 7999999999999985 5899999999999999874
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.6e-29 Score=225.51 Aligned_cols=224 Identities=15% Similarity=0.132 Sum_probs=168.7
Q ss_pred CccEEEEEEecCCCCcccc---ceeEEecCCCCceEEEEccCCCeEEEEe---cCCeEEEEEecccccceeecceeccce
Q 015490 86 RNAVLLSHFDFASNSLSDQ---PVAELRTDSDLPYRMAIHPHGDGIICAL---QNSCRLFEWDEVENTEIRRLGVKISEK 159 (406)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~ 159 (406)
.+.+.++.++.....+... .......+...+.+++|+|||+++++++ |+.++||+. .+ .+
T Consensus 103 d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~--~~------------~~ 168 (365)
T 4h5i_A 103 NKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDP--SD------------LT 168 (365)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEET--TT------------TE
T ss_pred CCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeEC--CC------------Cc
Confidence 3456677766554332111 1112234556789999999999987654 566666654 32 33
Q ss_pred eeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEee--eeccCCceeEEEEccCCCEEEEEeCCC----CE
Q 015490 160 VLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILN--ESEAHASVKDLSFSPDGKFLVSLGNRG----PG 233 (406)
Q Consensus 160 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~s~d~----~i 233 (406)
....+.++..|.+++|+|||+++++++.+ .+.+|+..+++.... ...|...|.+++|+|+++++++++.|+ .+
T Consensus 169 ~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 169 EKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 34445677889999999999999999865 566677666665533 234555899999999999999999887 58
Q ss_pred EEEEcCCCeee----eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe-eecCCCeEEEEE
Q 015490 234 RVWDLASSAVA----TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK-QVVREPVSSFNV 308 (406)
Q Consensus 234 ~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~i~~~~~ 308 (406)
++|++...... ..+. .+...|.+++|+|+++ ++++++.|+.|++||+++++++..+ .+|...|++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~------~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGE------LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp EEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSC------EEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE
T ss_pred eecccccceecceeeeeec-CCCCCeEeEEECCCCC------ceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE
Confidence 88998776542 2233 3455689999999998 4677788999999999999998875 689999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCC
Q 015490 309 SADGKLLAVGTASGDISIIDSSS 331 (406)
Q Consensus 309 sp~~~~l~~~~~dg~i~i~d~~~ 331 (406)
+|||++|++|+.|++|+|||+..
T Consensus 321 Spdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 321 SPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999999999964
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=7.7e-28 Score=218.48 Aligned_cols=236 Identities=15% Similarity=0.099 Sum_probs=177.6
Q ss_pred CCceEEEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeE
Q 015490 114 DLPYRMAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNL 191 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 191 (406)
..+..+++.+++..++.++ ++.++||+. .+ .+.+..+.++..|.++.|+++. ++++ .|+.|
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~--~~------------~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i 121 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD--VK------------KQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVI 121 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEET--TT------------TEEEEEEECSSCEEEEEECSSE--EEEE-ETTEE
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEEC--CC------------CcEEEEEECCCceEEEEEcCCE--EEEE-EcCEE
Confidence 3588999999999886544 556666554 32 3334445567789999999874 4333 47899
Q ss_pred EEEeCCCc-ceEeeeeccCCceeEEEEccCCCEEEE--EeCCCCEEEEEcCCCe----------------eeeecccCCc
Q 015490 192 RVFKWPSL-EIILNESEAHASVKDLSFSPDGKFLVS--LGNRGPGRVWDLASSA----------------VATPLAKEND 252 (406)
Q Consensus 192 ~vwd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~s--~s~d~~i~iwd~~~~~----------------~~~~~~~~~~ 252 (406)
++||+.++ +.+..+.. ....+++++ .++++ ++.||.|++||+++++ ....+.. |.
T Consensus 122 ~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~ 195 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HT 195 (355)
T ss_dssp EEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC-CS
T ss_pred EEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cC
Confidence 99999988 65555544 344566676 56666 4789999999998865 1444554 46
Q ss_pred ceEEEEEEEcCCCCceEEEEEEEcCCCcE-EEEEeCCCceEEEEee-e-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 015490 253 ELFASCRFSPLNNEDYVLYIAAITDRGAS-IVTWNTTTWKRIRTKQ-V-VREPVSSFNVSADGKLLAVGTASGDISIIDS 329 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-i~~~d~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~ 329 (406)
..+.+++|+|+++ .+++++.|++ |++||+++++.+..+. + |...|.+++|+|++++|++++.|++|++||+
T Consensus 196 ~~v~~~~~s~~g~------~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 196 NPIKMVRLNRKSD------MVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp SCEEEEEECTTSS------EEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CceEEEEECCCCC------EEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 6799999999998 4677788997 9999999999999998 4 8899999999999999999999999999999
Q ss_pred CCceEEE--E--------------------eecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 330 SSLQVRT--A--------------------VKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 330 ~~~~~~~--~--------------------~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
....... . +...+......++|++++++|++++.||.+++|++..++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 270 FNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp SCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred cCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 7643111 1 11111223467999999999999999999999999876653
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.7e-27 Score=220.78 Aligned_cols=274 Identities=14% Similarity=0.078 Sum_probs=205.2
Q ss_pred EEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeeccccc
Q 015490 89 VLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV 167 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
+.++.++.....+ +.+..+..+ ..+.+++|+|++..+++++ ++.+++|+ ..+++....... .....+.
T Consensus 101 ~~l~~~d~~~~~~--~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d--~~~g~~~~~~~~------~~~~~~~ 169 (433)
T 3bws_A 101 EKLIALDKEGITH--RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLD--INSGQTVRLSPP------EKYKKKL 169 (433)
T ss_dssp TCEEECCBTTCSE--EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEE--TTTCCEEEECCC------HHHHTTC
T ss_pred eEEEEECCCCCcc--eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEE--CCCCeEeeecCc------ccccccC
Confidence 3566666644321 344555544 4566999999555555554 55566655 443433221110 0011344
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe-CCCCEEEEEcCCCeeeee
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGRVWDLASSAVATP 246 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~~ 246 (406)
..+.+++|+++++++++++.|+.|++||+++++....+..+...+.+++|+|+++++++++ .|+.|++||+++++....
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 7899999999999999999999999999999998888877777999999999999886554 799999999999988887
Q ss_pred cccCCcceEEEEEEEcCCCCceEEEEEEEcC-----CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEE-EEEeC
Q 015490 247 LAKENDELFASCRFSPLNNEDYVLYIAAITD-----RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLL-AVGTA 320 (406)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~ 320 (406)
+..+ ..+.+++|+|+++. +++..... .++.|++||+++++.+..+. +...+.+++|+|+++.+ ++++.
T Consensus 250 ~~~~--~~~~~~~~~~~g~~---l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 250 TDKI--GLPRGLLLSKDGKE---LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp CCCC--SEEEEEEECTTSSE---EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETT
T ss_pred ecCC--CCceEEEEcCCCCE---EEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecC
Confidence 7653 34789999999984 22222211 58899999999988777664 34578999999999765 55578
Q ss_pred CCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEEC---------------CCcEEEEEecCCcCCCCc
Q 015490 321 SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASM---------------DSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 321 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~---------------dg~i~iw~~~~~~~~~~~ 381 (406)
++.|++||+.+++....+. +...+.+++|+|+|++|++++. ||.|++||+.+++.+..+
T Consensus 324 ~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 324 CSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp TTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 9999999999999888775 7778999999999999988876 579999999988765433
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=212.11 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=192.6
Q ss_pred ceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEe
Q 015490 116 PYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFK 195 (406)
Q Consensus 116 v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd 195 (406)
..+|+||+++ .|++|.|++++||+.+ +++....+ ....|...|.+++|+|++++|++|+.||+|++||
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~--tg~~~~~~---------~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~ 95 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSAS--SGDILQLL---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWD 95 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETT--TCCEEEEE---------ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECC--CCCEEEEE---------EecCCCCeEEEEEECCCCCEEEEEECCCcEEEee
Confidence 4789999986 7777779988887654 33322221 1123446799999999999999999999999999
Q ss_pred CCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEE
Q 015490 196 WPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAI 275 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 275 (406)
+++++.+..+.+|...+.++.+ ++..+++++.++.+++|+.............+...+..+.+.++++. +++
T Consensus 96 ~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~s 167 (318)
T 4ggc_A 96 VQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH------LAS 167 (318)
T ss_dssp TTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE------EEE
T ss_pred cCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE------EEE
Confidence 9999999998888877766554 56799999999999999998765544333345667889999999983 566
Q ss_pred cCCCcEEEEEeCCCceE----EEEeeecCCCeEEEEEcCCCCEE---EEEeCCCcEEEEECCCceEEEEeecccccceEE
Q 015490 276 TDRGASIVTWNTTTWKR----IRTKQVVREPVSSFNVSADGKLL---AVGTASGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 276 ~~~~~~i~~~d~~~~~~----~~~~~~~~~~i~~~~~sp~~~~l---~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
++.|+.|++||+++++. ......+.+.|.++.++|++..+ ++++.++.|++||........... +...+..
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--~~~~v~~ 245 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCS 245 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE--CSSCEEE
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc--ceeeeee
Confidence 77899999999987653 34455567889999999976533 355678999999999888777764 7788999
Q ss_pred EEEcCCCCeEEEEE--CCCcEEEEEecCCcCCCCc
Q 015490 349 LAFSYDSRALVSAS--MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 349 ~~~sp~~~~l~s~s--~dg~i~iw~~~~~~~~~~~ 381 (406)
+.|+|++..+++++ .|+.|++||+++++.+..+
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred eeecccccceEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 99999999888765 7999999999998876544
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=8.3e-28 Score=218.77 Aligned_cols=207 Identities=17% Similarity=0.233 Sum_probs=167.4
Q ss_pred ccCcEEEEEECCC---CCEEEEeeCCCeEEEEeCCC-cceE-eeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCC
Q 015490 166 NVGQQLALTFDSE---GTIFAAGSENGNLRVFKWPS-LEII-LNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLAS 240 (406)
Q Consensus 166 ~~~~v~~~~~s~~---g~~l~~~~~dg~i~vwd~~~-~~~~-~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 240 (406)
|.+.|.+++|+|+ |++|++|+.||.|++||+.+ +... ..+..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 4589999999999 69999999999999999987 5554 56777888999999999999999999999999999999
Q ss_pred CeeeeecccCCcceEEEEEE--EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC------------------
Q 015490 241 SAVATPLAKENDELFASCRF--SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR------------------ 300 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------ 300 (406)
++..... .+...+.+++| ++++. .+++++.|+.|++||+++++.+..+..+.
T Consensus 118 ~~~~~~~--~~~~~v~~~~~~~~~~~~------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (368)
T 3mmy_A 118 NQAIQIA--QHDAPVKTIHWIKAPNYS------CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE 189 (368)
T ss_dssp TEEEEEE--ECSSCEEEEEEEECSSCE------EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG
T ss_pred CCceeec--cccCceEEEEEEeCCCCC------EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC
Confidence 8877643 35667899999 66665 35566789999999999887666555432
Q ss_pred -----------------------CCeEEEEEcCCCCE----EEEEeCCCcEEEEECCCc---eEEEEeeccccc------
Q 015490 301 -----------------------EPVSSFNVSADGKL----LAVGTASGDISIIDSSSL---QVRTAVKKAHLG------ 344 (406)
Q Consensus 301 -----------------------~~i~~~~~sp~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~------ 344 (406)
....++++.++... +++++.||.|++||++.. .....+. .|..
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~ 268 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK-CHRSNGTNTS 268 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-CSEEC----C
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee-eeeccccccc
Confidence 23344555444433 999999999999999876 4455554 5655
Q ss_pred ------ceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 345 ------IVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 345 ------~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.|.+++|+|++++|++++.||.|++||+++++.+..+
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 7999999999999999999999999999988765443
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.9e-26 Score=210.90 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=175.5
Q ss_pred eeecccccCcEEEEEECCCCCEE-EEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe-CCCCEEEEE
Q 015490 160 VLSQLENVGQQLALTFDSEGTIF-AAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGRVWD 237 (406)
Q Consensus 160 ~~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd 237 (406)
....+.++..+.+++|+|+++++ ++++.|+.|++||+.+++....+..+. .+.+++|+|++++|++++ .++.|++||
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEE
Confidence 34445566779999999999876 677789999999999998887766554 899999999999886554 679999999
Q ss_pred cCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEE-E
Q 015490 238 LASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLL-A 316 (406)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~ 316 (406)
+.+++....+..+ ..+.+++|+|+++. +++++..++.|++||+.+++.+..+..+ ..+.+++|+|++++| +
T Consensus 103 ~~~~~~~~~~~~~--~~~~~~~~s~dg~~-----l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 103 TTSNTVAGTVKTG--KSPLGLALSPDGKK-----LYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp TTTTEEEEEEECS--SSEEEEEECTTSSE-----EEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEE
T ss_pred CCCCeEEEEEeCC--CCcceEEECCCCCE-----EEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEE
Confidence 9999888777643 34789999999985 4456678999999999999988888765 457999999999988 5
Q ss_pred EEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEE---CCCcEEEEEecCCcCCCCc
Q 015490 317 VGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS---MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 317 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s---~dg~i~iw~~~~~~~~~~~ 381 (406)
+++.++.|++||+.+++....+. +...+.+++|+|++++|++++ .++.|++||+.+++.+..+
T Consensus 175 ~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 66778999999999998888775 667889999999999998887 6899999999988765433
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=236.94 Aligned_cols=203 Identities=14% Similarity=0.162 Sum_probs=176.1
Q ss_pred ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC--CcceEeeeeccCCceeEEEEccC--CCEEEEEeCCCCEEEEEcCCC
Q 015490 166 NVGQQLALTFDSEGTIFAAGSENGNLRVFKWP--SLEIILNESEAHASVKDLSFSPD--GKFLVSLGNRGPGRVWDLASS 241 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~iwd~~~~ 241 (406)
|.+.|++++|+|++++|++|+.||.|++||+. +++....+.+|...|++++|+|+ +++|++++.||.|++||+.++
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 55889999999999999999999999999997 55667778888889999999988 999999999999999999988
Q ss_pred e--eeeecccCCcceEEEEEEEcC--CCCceEEEEEEEcCCCcEEEEEeCCCc--eEEEEeeecCCCeEEEEEcC-----
Q 015490 242 A--VATPLAKENDELFASCRFSPL--NNEDYVLYIAAITDRGASIVTWNTTTW--KRIRTKQVVREPVSSFNVSA----- 310 (406)
Q Consensus 242 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~i~~~~~sp----- 310 (406)
+ ....+.. +...+.+++|+|+ +. .+++++.|+.|++||++++ .....+..|...|.+++|+|
T Consensus 88 ~~~~~~~~~~-h~~~V~~v~~sp~~~~~------~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 88 RWSQIAVHAV-HSASVNSVQWAPHEYGP------LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEEEEECC-CSSCEEEEEECCGGGCS------EEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred cccccccccC-CCCCeEEEEECCCCCCC------EEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 6 4444443 4567999999999 66 4566778999999999876 33455677889999999999
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCc----eEEEEeecccccceEEEEEcCC---CCeEEEEECCCcEEEEEecCC
Q 015490 311 --------DGKLLAVGTASGDISIIDSSSL----QVRTAVKKAHLGIVTALAFSYD---SRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 311 --------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~sp~---~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+++++++|+.||.|++||++++ .....+. +|...|.+++|+|+ +++|++++.||.|++||+.++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999999876 4555554 89999999999999 899999999999999999986
Q ss_pred c
Q 015490 376 K 376 (406)
Q Consensus 376 ~ 376 (406)
+
T Consensus 240 ~ 240 (753)
T 3jro_A 240 Q 240 (753)
T ss_dssp S
T ss_pred C
Confidence 4
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.3e-27 Score=219.99 Aligned_cols=201 Identities=12% Similarity=0.078 Sum_probs=142.6
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCcceEe-----eeeccCCceeEEEEcc--------CCCEEEEEeCCCCEEEEEc
Q 015490 172 ALTFDSEGTIFAAGSENGNLRVFKWPSLEIIL-----NESEAHASVKDLSFSP--------DGKFLVSLGNRGPGRVWDL 238 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~~~~~i~~~~~s~--------~~~~l~s~s~d~~i~iwd~ 238 (406)
...+++++.+|++++.|++|++||.++++... .+.+|...|++++|+| |+++|++++.|++|+|||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 33445567789999999999999998876432 3567888999999998 8899999999999999999
Q ss_pred CCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe----------------------
Q 015490 239 ASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK---------------------- 296 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~---------------------- 296 (406)
+++.....+..++ ..+.+++|+|++.. .+++++.|+.|++||+++++.....
T Consensus 174 ~~~~~~~~~~~~~-~~v~~v~~~p~~~~-----~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 174 TDEGPILAGYPLS-SPGISVQFRPSNPN-----QLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp ETTEEEEEEEECS-SCEEEEEEETTEEE-----EEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred CCCceeeeecCCC-CCcEEEEECCCCCc-----eEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9888777666554 45789999998864 5677789999999999887654322
Q ss_pred ---eecCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEE------------------EcC-
Q 015490 297 ---QVVREPVSSFNVS-ADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALA------------------FSY- 353 (406)
Q Consensus 297 ---~~~~~~i~~~~~s-p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~------------------~sp- 353 (406)
..|...+.++.|+ |+++.|++++.|+++++||+..++....+. .|...+..+. |+|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccCcceeEEEccC
Confidence 2345567788886 799999999999999999998877665553 4444443333 333
Q ss_pred -CCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 354 -DSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 354 -~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
++.++++|+.||+|++||+.+++...
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 34466788899999999999887643
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1e-26 Score=203.08 Aligned_cols=207 Identities=10% Similarity=0.021 Sum_probs=144.5
Q ss_pred CCCCceEEEEccC----CCeEEEEecCCeEEEEEecccccce-----------eecceeccceeeecccc-cCcEEEEEE
Q 015490 112 DSDLPYRMAIHPH----GDGIICALQNSCRLFEWDEVENTEI-----------RRLGVKISEKVLSQLEN-VGQQLALTF 175 (406)
Q Consensus 112 h~~~v~~~~~sp~----~~~l~~~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~v~~~~~ 175 (406)
|...|.+++++|+ +..+++++ ..+++|.+. +++.+ +.+.+.+..+.+..+.. ...+..++|
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g-~~~~v~~l~--~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSG-NIKAVLGLT--KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEE-EEEEEEEET--TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECCCccccccEEEeCC-CeEEEEecC--CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 3457888888888 77777765 335565542 22222 12222223333333333 356778888
Q ss_pred CC---CCCEEEEeeCCCeEEEEeCCCcceEeeeeccCC---ceeEEEEccCCCEE------------EEEeCCCCEEEEE
Q 015490 176 DS---EGTIFAAGSENGNLRVFKWPSLEIILNESEAHA---SVKDLSFSPDGKFL------------VSLGNRGPGRVWD 237 (406)
Q Consensus 176 s~---~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l------------~s~s~d~~i~iwd 237 (406)
++ ++.+|++|+.|++|+|||+.+++++..+.+|+. .+.+++|+|+|+++ ++++.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 88 679999999999999999999999998876554 67788999999876 5677899999999
Q ss_pred cCCCeeeeec----ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeE-EEEEcCCC
Q 015490 238 LASSAVATPL----AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVS-SFNVSADG 312 (406)
Q Consensus 238 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~-~~~~sp~~ 312 (406)
..+++.+..+ ...+...+.+..++ +. ++++++.|++|++||+.+++++.++.+|...+. +++|+|||
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~------~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH------CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE--TT------EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC--CC------EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 9999887654 11222223233333 33 467778899999999999999999998876544 68999999
Q ss_pred CEEEEEeCCCcEEEEEC
Q 015490 313 KLLAVGTASGDISIIDS 329 (406)
Q Consensus 313 ~~l~~~~~dg~i~i~d~ 329 (406)
++|++|+.|++|+|||+
T Consensus 339 ~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCcEEEecC
Confidence 99999999999999995
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=5e-25 Score=210.29 Aligned_cols=263 Identities=12% Similarity=0.088 Sum_probs=199.3
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccC
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
.+..||.... +.+.++..+.. +.+++|+|||++|++++ ++.+++|+.+..++ +.+..+....
T Consensus 160 ~V~v~D~~t~----~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~------------~~~~~i~~g~ 222 (543)
T 1nir_A 160 QIALVDGDSK----KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP------------TKVAEIKIGI 222 (543)
T ss_dssp EEEEEETTTC----CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSC------------EEEEEEECCS
T ss_pred eEEEEECCCc----eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCC------------cEEEEEecCC
Confidence 5566776653 45667774333 89999999999999987 66666655421322 2333444556
Q ss_pred cEEEEEECC----CCCEEEEeeC-CCeEEEEeCCCcceEeeeecc----------CC-ceeEEEEccCCCE-EEEEeCCC
Q 015490 169 QQLALTFDS----EGTIFAAGSE-NGNLRVFKWPSLEIILNESEA----------HA-SVKDLSFSPDGKF-LVSLGNRG 231 (406)
Q Consensus 169 ~v~~~~~s~----~g~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~----------~~-~i~~~~~s~~~~~-l~s~s~d~ 231 (406)
.+..++|+| ||+++++++. +++|.+||..+++.+..+..+ .. .+.++.++|++.. +++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 789999999 9999999885 899999999999888776542 22 6889999998765 55566789
Q ss_pred CEEEEEcCCCeeee--ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee----cCCCeEE
Q 015490 232 PGRVWDLASSAVAT--PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV----VREPVSS 305 (406)
Q Consensus 232 ~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~i~~ 305 (406)
.|.+||+.+.+.+. .+. ....+..+.|+|++++ ++++...++.|.+||..+++++..+.. |.+....
T Consensus 303 ~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~-----l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRY-----FMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp EEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCE-----EEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred eEEEEEecCCCcceeEEec--cCcCccCceECCCCCE-----EEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 99999998866443 332 3344668999999985 455556788999999999999888774 4333333
Q ss_pred EEEcCC-CCEEEEEe-CCCcEEEEECCC-------ceEEEEeecccccceEEEEEcCCCCeEEEEE-------CCCcEEE
Q 015490 306 FNVSAD-GKLLAVGT-ASGDISIIDSSS-------LQVRTAVKKAHLGIVTALAFSYDSRALVSAS-------MDSSVRV 369 (406)
Q Consensus 306 ~~~sp~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s-------~dg~i~i 369 (406)
+ ++|+ +..++++. .|++|.+||+.+ ++.+.++. .|.+.+..+.++|+|++|++++ .+++|.+
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE-cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 3 4777 66666665 589999999998 88999986 7888889999999999999987 2779999
Q ss_pred EEecCCcCC
Q 015490 370 TVIEDKKKS 378 (406)
Q Consensus 370 w~~~~~~~~ 378 (406)
||+.+++..
T Consensus 454 ~d~~~~~~~ 462 (543)
T 1nir_A 454 FDLKNLDAK 462 (543)
T ss_dssp EETTCTTSC
T ss_pred EECCCCCCC
Confidence 999998875
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=6.2e-25 Score=203.41 Aligned_cols=259 Identities=14% Similarity=0.128 Sum_probs=190.9
Q ss_pred EEEEEEec--CCCCccccce--eEEecCCCCceEEEEcc--------------CCCeEEEEe-c-CC---eEEEEEeccc
Q 015490 89 VLLSHFDF--ASNSLSDQPV--AELRTDSDLPYRMAIHP--------------HGDGIICAL-Q-NS---CRLFEWDEVE 145 (406)
Q Consensus 89 ~~~~~~~~--~~~~~~~~~~--~~~~~h~~~v~~~~~sp--------------~~~~l~~~~-~-~~---~~i~~~~~~~ 145 (406)
+.+..||. .... .+ ..+.+|...+..+++++ .+..+++++ + +. ..|+.|+...
T Consensus 93 ~~i~lwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g 168 (415)
T 2hqs_A 93 VAYQLVDTGGAPGT----VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG 168 (415)
T ss_dssp EEEEEEECSSSTTC----EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS
T ss_pred EEEEEEeCCCCCCC----EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC
Confidence 35566776 4432 33 56889999998888875 155666554 2 12 4666666542
Q ss_pred ccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCC---eEEEEeCCCcceEeeeeccCCceeEEEEccCCC
Q 015490 146 NTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENG---NLRVFKWPSLEIILNESEAHASVKDLSFSPDGK 222 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 222 (406)
..... ...+...+.+++|+|||++|++++.++ .|++||+.+++.. .+..+...+.+++|+|||+
T Consensus 169 -~~~~~-----------l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 169 -YNQFV-----------VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp -CSCEE-----------EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred -CCCEE-----------EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 21111 122557899999999999999998875 9999999988775 4566667899999999999
Q ss_pred EEE-EEeCCCC--EEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCc--EEEEEeCCCceEEEEee
Q 015490 223 FLV-SLGNRGP--GRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA--SIVTWNTTTWKRIRTKQ 297 (406)
Q Consensus 223 ~l~-s~s~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~i~~~d~~~~~~~~~~~ 297 (406)
+|+ +++.++. |++||+.+++.. .+.. +...+.+++|+|+++. ++..+..++ .|++||+.+++. ..+.
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~-~l~~-~~~~~~~~~~spdg~~-----l~~~s~~~g~~~i~~~d~~~~~~-~~l~ 307 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIR-QVTD-GRSNNTEPTWFPDSQN-----LAFTSDQAGRPQVYKVNINGGAP-QRIT 307 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEE-ECCC-CSSCEEEEEECTTSSE-----EEEEECTTSSCEEEEEETTSSCC-EECC
T ss_pred EEEEEEecCCCceEEEEECCCCCEE-eCcC-CCCcccceEECCCCCE-----EEEEECCCCCcEEEEEECCCCCE-EEEe
Confidence 888 5666655 999999887763 4443 3456889999999985 333333333 888999988764 3455
Q ss_pred ecCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC---cEEEEE
Q 015490 298 VVREPVSSFNVSADGKLLAVGTAS---GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS---SVRVTV 371 (406)
Q Consensus 298 ~~~~~i~~~~~sp~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg---~i~iw~ 371 (406)
.+...+.+++|+|+|++|++++.+ ..|++||+.+++.. .+. .+. .+.+++|+|||++|++++.++ .|++||
T Consensus 308 ~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 308 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-STF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC-CSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-Eec-CCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 566778899999999999988764 58999999988774 343 343 899999999999999988777 799999
Q ss_pred ecCC
Q 015490 372 IEDK 375 (406)
Q Consensus 372 ~~~~ 375 (406)
+..+
T Consensus 385 ~~g~ 388 (415)
T 2hqs_A 385 TDGR 388 (415)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8754
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=2.6e-24 Score=193.86 Aligned_cols=246 Identities=12% Similarity=0.153 Sum_probs=175.9
Q ss_pred ecCCCCceEEEEccCCCeEEEEec--CCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC
Q 015490 110 RTDSDLPYRMAIHPHGDGIICALQ--NSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE 187 (406)
Q Consensus 110 ~~h~~~v~~~~~sp~~~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 187 (406)
..|...+.+++|+|++++|++++. +.+.+|+++..++.. ..+..+.....+.+++|+|+|+++++++.
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL----------TFAAESALPGSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----------EEEEEEECSSCCSEEEECTTSSEEEEEET
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce----------eeccccccCCCCcEEEEcCCCCEEEEEec
Confidence 457788999999999999888873 778888776433321 11222223347789999999998876654
Q ss_pred -CCeEEEEeCC---CcceEeeeeccCCceeEEEEccCCCEEEEEe-CCCCEEEEEcCC-Ceeee----ecccCCcceEEE
Q 015490 188 -NGNLRVFKWP---SLEIILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGRVWDLAS-SAVAT----PLAKENDELFAS 257 (406)
Q Consensus 188 -dg~i~vwd~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~-~~~~~----~~~~~~~~~~~~ 257 (406)
++.|.+||+. +.+....+ .....+.+++|+|+++++++++ .++.|++||+.+ ++... .+.......+..
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 182 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEE
T ss_pred CCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcce
Confidence 8899999994 33333333 3334689999999999888887 889999999987 54432 223333445778
Q ss_pred EEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC--ceE--EEEeeec------CCCeEEEEEcCCCCEEEEEe-CCCcEEE
Q 015490 258 CRFSPLNNEDYVLYIAAITDRGASIVTWNTTT--WKR--IRTKQVV------REPVSSFNVSADGKLLAVGT-ASGDISI 326 (406)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~~------~~~i~~~~~sp~~~~l~~~~-~dg~i~i 326 (406)
++|+|+++. ++++...++.|.+||+.. ++. ....... ...+..++|+|+|++|+++. .++.|.+
T Consensus 183 ~~~~pdg~~-----l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 183 MVFHPNEQY-----AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITV 257 (343)
T ss_dssp EEECTTSSE-----EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEECCCCCE-----EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEE
Confidence 999999984 445556789999999953 332 2222211 23567899999999887555 6899999
Q ss_pred EECC----CceEEEEeecccccceEEEEEcCCCCeEEEEE-CCCcEEEEEec
Q 015490 327 IDSS----SLQVRTAVKKAHLGIVTALAFSYDSRALVSAS-MDSSVRVTVIE 373 (406)
Q Consensus 327 ~d~~----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s-~dg~i~iw~~~ 373 (406)
||+. +.+.+..+. .+. .+.+++|+|+|++|++++ .++.|.+|+++
T Consensus 258 ~d~~~~~~~~~~~~~~~-~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQP-TET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEECTTSCCEEEEEEEE-CSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEcCCCCceEEeeeec-CCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9998 334455553 333 388999999999888887 68999999765
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=3.1e-24 Score=192.89 Aligned_cols=269 Identities=14% Similarity=0.080 Sum_probs=194.1
Q ss_pred EEEEEecCCCCccccceeEEecCC-C-CceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDS-D-LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV 167 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~-~-~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
.+..|+.... +.+..+.... . .+.+++|+|+++.++++......|+.|+..+++....+...... .+.
T Consensus 12 ~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------~~~ 81 (337)
T 1pby_B 12 KLVVIDTEKM----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE------ERV 81 (337)
T ss_dssp EEEEEETTTT----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT------EEE
T ss_pred eEEEEECCCC----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc------ccc
Confidence 5666776552 3444444222 2 58899999999988777644446666776655544333221000 011
Q ss_pred CcEEEEEECCCCCEEEEee------------CCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEE
Q 015490 168 GQQLALTFDSEGTIFAAGS------------ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRV 235 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~i 235 (406)
..+.+++|+|+|++++++. .++.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2456789999999988886 579999999998887766554 3467889999999988887 689999
Q ss_pred EEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCc-----------------------EEEEEeCCCceE
Q 015490 236 WDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA-----------------------SIVTWNTTTWKR 292 (406)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----------------------~i~~~d~~~~~~ 292 (406)
||+.+++....+....... .+.|+|++.. +.+.+..++ .|.+||+.+++.
T Consensus 159 ~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEA--ETYAQPDVLA-----VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp EETTTTEEEEEECSTTTTT--TTBCCCBCCC-----CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred EECCCCcEeeeeeccccCC--CceeCCCccE-----EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 9999998877665443111 2367888875 222222222 579999998876
Q ss_pred E-EEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 293 I-RTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 293 ~-~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
. ..+..+...+.+++|+|+|++++++ ++.|.+||+.+++.+..+. ....+.+++|+|+|++|++++.++.|++||
T Consensus 232 ~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec--CCCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 4 2233445678899999999999988 7899999999998888775 345678999999999999999999999999
Q ss_pred ecCCcCCCCch
Q 015490 372 IEDKKKSGGLN 382 (406)
Q Consensus 372 ~~~~~~~~~~~ 382 (406)
+.+++.+..++
T Consensus 308 ~~~~~~~~~~~ 318 (337)
T 1pby_B 308 AETLEKKGQVD 318 (337)
T ss_dssp TTTCCEEEEEE
T ss_pred CcCCcEEEEEE
Confidence 99988766554
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=8.3e-24 Score=189.91 Aligned_cols=262 Identities=13% Similarity=0.133 Sum_probs=186.1
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQ 169 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (406)
.+..|+.... +.+..+..+...+ +++|+|+++++++++.+...|+.|+..+++.. ...+.....
T Consensus 21 ~v~~~d~~~~----~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-----------~~~~~~~~~ 84 (331)
T 3u4y_A 21 RISFFSTDTL----EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-----------VVAIQEGQS 84 (331)
T ss_dssp EEEEEETTTC----CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-----------EEEEEECSS
T ss_pred eEEEEeCccc----ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-----------EEecccCCC
Confidence 5667777653 3445555666667 99999999988887754447777777654330 122223333
Q ss_pred EEE-EEECCCCCEEEEeeCCC---eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEE-eCCCC-EEEEEcCCCee
Q 015490 170 QLA-LTFDSEGTIFAAGSENG---NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGP-GRVWDLASSAV 243 (406)
Q Consensus 170 v~~-~~~s~~g~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~-i~iwd~~~~~~ 243 (406)
... ++|+|+|++++++..++ .|.+||+.+++.+..+.. .....+++|+|+|++++++ ..++. +.+|++.....
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 344 99999999998665553 899999999888766544 3457999999999866555 55588 99999875433
Q ss_pred e-----eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceE---EEEeeecCCCeEEEEEcCCCCEE
Q 015490 244 A-----TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKR---IRTKQVVREPVSSFNVSADGKLL 315 (406)
Q Consensus 244 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l 315 (406)
+ ..+ ........++|+|+++. +.++...++.|.+||+.+++. +..+..+ ..+..++|+|||+++
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~~spdg~~-----l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 164 LFDTGQEFI--SGGTRPFNITFTPDGNF-----AFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTV 235 (331)
T ss_dssp EEEEEEEEE--CSSSSEEEEEECTTSSE-----EEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEE
T ss_pred EeecCCccc--cCCCCccceEECCCCCE-----EEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEE
Confidence 2 122 22334678999999985 445566789999999998887 7776654 567899999999988
Q ss_pred EEEeC-CCcEEEEECCCceE--EEEeecc---cccc---eEEEEEcCCCCeEEEEE-CCCcEEEEEecCCc
Q 015490 316 AVGTA-SGDISIIDSSSLQV--RTAVKKA---HLGI---VTALAFSYDSRALVSAS-MDSSVRVTVIEDKK 376 (406)
Q Consensus 316 ~~~~~-dg~i~i~d~~~~~~--~~~~~~~---~~~~---v~~~~~sp~~~~l~s~s-~dg~i~iw~~~~~~ 376 (406)
++++. ++.|.+||+.+++. +..+... +..+ ...++|+|||++|++++ .++.|.+||+.+..
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 77654 77899999998877 3333211 1122 35689999999886655 45699999998754
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=2.7e-23 Score=192.45 Aligned_cols=241 Identities=14% Similarity=0.110 Sum_probs=179.0
Q ss_pred EEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-c-CCeEEEEEecccccceeecceeccceeeecccc
Q 015490 89 VLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-Q-NSCRLFEWDEVENTEIRRLGVKISEKVLSQLEN 166 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (406)
-.++.|+.+. .....+.+|...|.+++|+|+|+.|++++ + +...|+.|+..+++.. ....+
T Consensus 159 ~~i~i~d~~g-----~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~------------~l~~~ 221 (415)
T 2hqs_A 159 YELRVSDYDG-----YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR------------QVASF 221 (415)
T ss_dssp EEEEEEETTS-----CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE------------EEECC
T ss_pred ceEEEEcCCC-----CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE------------EeecC
Confidence 3667777654 34577888999999999999999999887 3 2346666776544321 11224
Q ss_pred cCcEEEEEECCCCCEEE-EeeCCC--eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC-CC--CEEEEEcCC
Q 015490 167 VGQQLALTFDSEGTIFA-AGSENG--NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN-RG--PGRVWDLAS 240 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~-d~--~i~iwd~~~ 240 (406)
...+.+++|+|||++|+ +++.++ .|++||+.+++. ..+..+...+.+++|+|||++|++++. ++ .|++||+.+
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 46789999999999887 565555 499999988776 456667778999999999999998886 44 577789888
Q ss_pred CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC
Q 015490 241 SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 320 (406)
++... +.. +...+..++|+|+++. ++.......+..|++||+.+++.. .+..+. .+.+++|+|+|++|++++.
T Consensus 301 ~~~~~-l~~-~~~~~~~~~~spdG~~---l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 301 GAPQR-ITW-EGSQNQDADVSSDGKF---MVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp SCCEE-CCC-SSSEEEEEEECTTSSE---EEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred CCEEE-Eec-CCCcccCeEECCCCCE---EEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 76433 332 3446778999999985 222222223579999999988763 455453 7899999999999999888
Q ss_pred CC---cEEEEECCCceEEEEeecccccceEEEEEcCCCC
Q 015490 321 SG---DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSR 356 (406)
Q Consensus 321 dg---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 356 (406)
++ .|++||+.. .....+. .|.+.|.+++|+|.-.
T Consensus 374 ~~~~~~l~~~d~~g-~~~~~l~-~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 374 QGMGSVLNLVSTDG-RFKARLP-ATDGQVKFPAWSPYLH 410 (415)
T ss_dssp ETTEEEEEEEETTS-CCEEECC-CSSSEEEEEEECCCCC
T ss_pred CCCccEEEEEECCC-CcEEEee-CCCCCCcCCccccccc
Confidence 76 799999974 4455664 7899999999999643
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1e-23 Score=201.20 Aligned_cols=297 Identities=12% Similarity=0.096 Sum_probs=209.3
Q ss_pred ccCCCCCcEEEEEcCCCCCCCCcCccEEEEEEec--CCCCccccceeEEecCCCCceEEEEcc----CCCeEEEEe--cC
Q 015490 63 SDDIRRNYYVVLAGGGGAGNSGIRNAVLLSHFDF--ASNSLSDQPVAELRTDSDLPYRMAIHP----HGDGIICAL--QN 134 (406)
Q Consensus 63 ~~~~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~sp----~~~~l~~~~--~~ 134 (406)
...+++++++++++.++ .+..||. .+ .+.+.++. +...+..++|+| +|+++++++ ++
T Consensus 184 v~~spdg~~l~v~~~d~----------~V~v~D~~~~t----~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDA----------RIDMIDLWAKE----PTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEECTTSCEEEEEETTS----------EEEEEETTSSS----CEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred EEECCCCCEEEEECCCC----------eEEEEECcCCC----CcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 34566788888775431 4555666 33 24556666 455679999999 999999887 56
Q ss_pred CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcceEe-eeeccCCce
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT-IFAAGSENGNLRVFKWPSLEIIL-NESEAHASV 212 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i 212 (406)
++.+| |..+.+.+..+...........+.....+..+.++|++. ++++...++.|.+||+.+.+.+. ....+...+
T Consensus 249 ~v~v~--D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~ 326 (543)
T 1nir_A 249 QFAIM--DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL 326 (543)
T ss_dssp EEEEE--ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSC
T ss_pred eEEEE--eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCc
Confidence 66665 555555544433210000000111224788999999775 55666778999999998765433 122344568
Q ss_pred eEEEEccCCCEEEEEe-CCCCEEEEEcCCCeeeeecccC---CcceEEEEEEEcCCCCceEEEEEEEc-CCCcEEEEEeC
Q 015490 213 KDLSFSPDGKFLVSLG-NRGPGRVWDLASSAVATPLAKE---NDELFASCRFSPLNNEDYVLYIAAIT-DRGASIVTWNT 287 (406)
Q Consensus 213 ~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~d~ 287 (406)
.++.|+|+|+++++++ .+++|.+||..++++...+... +......+ ++|++.. +.+++ ..+++|.+||+
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~-----~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGP-----VWSTSHLGDGSISLIGT 400 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEE-----EEEEEBSSSSEEEEEEC
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCcc-----EEEeccCCCceEEEEEe
Confidence 8999999999877655 5889999999999988877642 21111122 4677553 23343 46899999999
Q ss_pred CC-------ceEEEEeeecCCCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCceEE-EEee-------cccccc
Q 015490 288 TT-------WKRIRTKQVVREPVSSFNVSADGKLLAVGT-------ASGDISIIDSSSLQVR-TAVK-------KAHLGI 345 (406)
Q Consensus 288 ~~-------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-------~dg~i~i~d~~~~~~~-~~~~-------~~~~~~ 345 (406)
.+ ++.+.++..+...+..++++|++++|++++ .+++|.+||+.+++.. ..+. ..+...
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~ 480 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR 480 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE
T ss_pred CCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc
Confidence 98 899999999887888999999999999987 2679999999998876 3331 135678
Q ss_pred eEEEEEcCCCCeEEEEE-----CCCcEEEEEecCCcCCCCch
Q 015490 346 VTALAFSYDSRALVSAS-----MDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 346 v~~~~~sp~~~~l~s~s-----~dg~i~iw~~~~~~~~~~~~ 382 (406)
+..+.|+|+|+.|.++. .|+.|.|||.++++.+..++
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred eEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 99999999999988663 47999999999988765443
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=7.5e-24 Score=211.01 Aligned_cols=240 Identities=13% Similarity=0.077 Sum_probs=175.6
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEeccccc--ceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENT--EIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
.|.+++|+|||++|++++.+. ||.|+..++. ... ....+...+.+++|||||++|++++ ++.|+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~--i~~~d~~~~~~~~~~-----------~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~ 175 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGE--LYLYDLKQEGKAAVR-----------QLTHGEGFATDAKLSPKGGFVSFIR-GRNLW 175 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTE--EEEEESSSCSTTSCC-----------BCCCSSSCEEEEEECTTSSEEEEEE-TTEEE
T ss_pred CcceeEECCCCCEEEEEeCCc--EEEEECCCCCcceEE-----------EcccCCcccccccCCCCCCEEEEEe-CCcEE
Confidence 388999999999999988754 5555554331 111 1122346789999999999999987 46999
Q ss_pred EEeCCCcceEeeeeccCCc----------------eeEEEEccCCCEEEEEeCCC-------------------------
Q 015490 193 VFKWPSLEIILNESEAHAS----------------VKDLSFSPDGKFLVSLGNRG------------------------- 231 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~----------------i~~~~~s~~~~~l~s~s~d~------------------------- 231 (406)
+||+.+++.......+... +.+++|||||++|++++.|+
T Consensus 176 ~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp EEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred EEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 9999988766544333322 47899999999999987765
Q ss_pred --------CEEEEEcCC-Ceeeeeccc-CCcceEEEEEEEcCCCCceEEEEEEE--cCCCcEEEEEeCCCceEEEEeeec
Q 015490 232 --------PGRVWDLAS-SAVATPLAK-ENDELFASCRFSPLNNEDYVLYIAAI--TDRGASIVTWNTTTWKRIRTKQVV 299 (406)
Q Consensus 232 --------~i~iwd~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~ 299 (406)
.|++||+.+ ++....... .+...+..++| |+++. +++... ...+..|++||+.+++....+..+
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~---l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH---LSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE---EEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE---EEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 788999988 776544332 34567889999 99985 222222 234688999999998877766655
Q ss_pred CC----CeEEEEEcCCCCEEEEEeCCCcEEEEECC-CceEEEEeecccccceEEE-EEcCCCCeEEE-EECCC--cEEEE
Q 015490 300 RE----PVSSFNVSADGKLLAVGTASGDISIIDSS-SLQVRTAVKKAHLGIVTAL-AFSYDSRALVS-ASMDS--SVRVT 370 (406)
Q Consensus 300 ~~----~i~~~~~sp~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s-~s~dg--~i~iw 370 (406)
.. .+..++|+|||+++++++.+|.++||.++ ++. ...+. .|...+..+ .|+|+|+.|+. ++.++ .++||
T Consensus 332 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp CSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred CCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 43 34689999999999999889987777765 344 55554 677778887 59999987764 44455 89999
Q ss_pred EecC
Q 015490 371 VIED 374 (406)
Q Consensus 371 ~~~~ 374 (406)
++..
T Consensus 410 ~~~~ 413 (741)
T 2ecf_A 410 AVPL 413 (741)
T ss_dssp EEET
T ss_pred EEEc
Confidence 9974
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=5.8e-23 Score=185.73 Aligned_cols=267 Identities=11% Similarity=0.145 Sum_probs=178.0
Q ss_pred ccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec--CCeEEEEEecccccceeecceeccceeeec-
Q 015490 87 NAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ--NSCRLFEWDEVENTEIRRLGVKISEKVLSQ- 163 (406)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (406)
..+.++.++.++..+. ......+...+..++|+|+|+ |++++. +...|+.|+...+.. +.+..
T Consensus 16 ~~i~v~~~d~~tg~~~---~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~----------~~~~~~ 81 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLT---NDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA----------HKLNTV 81 (347)
T ss_dssp CEEEEEEEETTTTEEE---EEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE----------EEEEEE
T ss_pred CCEEEEEEcCCCCeEE---EeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE----------EEeeee
Confidence 4678888888664431 123344567789999999999 655542 233444444432221 11111
Q ss_pred ccccCcEEEEEECCCCCEEEEee-CCCeEEEEeCCC-cc--eEeeeecc---------CCceeEEEEccCCCEEEEEeCC
Q 015490 164 LENVGQQLALTFDSEGTIFAAGS-ENGNLRVFKWPS-LE--IILNESEA---------HASVKDLSFSPDGKFLVSLGNR 230 (406)
Q Consensus 164 ~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~vwd~~~-~~--~~~~~~~~---------~~~i~~~~~s~~~~~l~s~s~d 230 (406)
..+...+..++|+|||++|++++ .++.|.+|++.. +. .+..+... ...+.+++|+|+|+.+++...+
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 12345678899999999888887 679999999963 22 22222211 1247889999999966666678
Q ss_pred CCEEEEEcC-CCeeee--ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC--ceE--EEEeeecC---
Q 015490 231 GPGRVWDLA-SSAVAT--PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT--WKR--IRTKQVVR--- 300 (406)
Q Consensus 231 ~~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~~~--- 300 (406)
+.|++|++. +++... .+..........++|+|+++. ++++...++.|.+|++.. ++. +..+....
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~-----l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY-----AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE-----EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE-----EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 899999998 454322 222233335678999999984 445567788999998763 443 22222222
Q ss_pred ---CCeEEEEEcCCCCEEEE-EeCCCcEEEEECCC---ceEEEEeecccccceEEEEEcCCCCeEEEEECC-CcEEEEEe
Q 015490 301 ---EPVSSFNVSADGKLLAV-GTASGDISIIDSSS---LQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-SSVRVTVI 372 (406)
Q Consensus 301 ---~~i~~~~~sp~~~~l~~-~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-g~i~iw~~ 372 (406)
..+..++|+|||++|++ ...++.|.+|++.. .+.+..+. .+...+..++|+|||++|++++.+ +.|.+|++
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 34788999999998855 45589999999973 34455553 455678899999999998888765 89999966
Q ss_pred c
Q 015490 373 E 373 (406)
Q Consensus 373 ~ 373 (406)
+
T Consensus 316 d 316 (347)
T 3hfq_A 316 D 316 (347)
T ss_dssp C
T ss_pred e
Confidence 4
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=7.3e-25 Score=192.96 Aligned_cols=249 Identities=11% Similarity=0.038 Sum_probs=175.6
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEeccc-ccceeecceeccceeeecccccC
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVE-NTEIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
.++.|+.... ....+..|...|.+++|+|++++|+++.++.+.+ |+..+ ++..... ......
T Consensus 23 ~i~~~d~~~~-----~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~--~d~~~~~~~~~~~----------~~~~~~ 85 (297)
T 2ojh_A 23 SIEIFNIRTR-----KMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYR--LSLAGDPSPEKVD----------TGFATI 85 (297)
T ss_dssp EEEEEETTTT-----EEEEEEEESSCCEEEEECTTSSEEEEEETTEEEE--EESSSCCSCEECC----------CTTCCC
T ss_pred eEEEEeCCCC-----ceeeeccCCcceEeeEECCCCCEEEEEcCCeEEE--EeCCCCCCceEec----------cccccc
Confidence 5666776552 3445667899999999999999999988775555 44443 2221111 111225
Q ss_pred cEEEEEECCCCCEEEEeeC--CC--eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEE-EEeCCCCEEEEEcC--CC
Q 015490 169 QQLALTFDSEGTIFAAGSE--NG--NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLV-SLGNRGPGRVWDLA--SS 241 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~--dg--~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~iwd~~--~~ 241 (406)
.+.+++|+|+|++|++++. ++ .|..++..++.. ..+. ....+..++|+|++++|+ +++.++.+++|++. ++
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~ 163 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG 163 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC
Confidence 6788999999999999883 33 455555555543 2333 333588999999999887 67788999999864 33
Q ss_pred eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-CceEEEEeeecCCCeEEEEEcCCCCEEEEEeC
Q 015490 242 AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-TWKRIRTKQVVREPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 320 (406)
+. ..+.. +...+.+++|+|+++. +++.+..++.+.+|++. .+.....+..+...+.+++|+|+|++|++++.
T Consensus 164 ~~-~~~~~-~~~~~~~~~~s~dg~~-----l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 164 VE-TRLTH-GEGRNDGPDYSPDGRW-----IYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CE-EECCC-SSSCEEEEEECTTSSE-----EEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred cc-eEccc-CCCccccceECCCCCE-----EEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 33 33333 3446789999999984 44444556777777765 44556667767777899999999999998876
Q ss_pred C-----------CcEEEEECCCceEE--EEeecccccceEEEEEcCCCCeEEEEECCC
Q 015490 321 S-----------GDISIIDSSSLQVR--TAVKKAHLGIVTALAFSYDSRALVSASMDS 365 (406)
Q Consensus 321 d-----------g~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg 365 (406)
+ +.|++||+.+++.. ..+. +|...+.+++|+|++++|++++.|.
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLF-GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE-ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccC-CCCcccccceECCCCCEEEEEEecc
Confidence 5 56999999887653 3332 6788899999999999998887654
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.9e-22 Score=182.53 Aligned_cols=280 Identities=12% Similarity=0.106 Sum_probs=201.5
Q ss_pred CCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEeccc
Q 015490 66 IRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVE 145 (406)
Q Consensus 66 ~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~ 145 (406)
+++++.++++..++.. ....-.++.++.... +.+..+.. ...+..++|+|+|++++++......|+.|+..+
T Consensus 49 s~dg~~l~~~~~~~~~---~~~~~~v~~~d~~~~----~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 49 SQQENALWLATSQSRK---LDKGGVVYRLDPVTL----EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp ETTTTEEEEEECCCTT---TEESEEEEEECTTTC----CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCEEEEEcCCCcC---CCCCccEEEEcCCCC----eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 3466677766544321 011336777787653 23444443 345789999999998887764444677777766
Q ss_pred ccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee--CCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCE
Q 015490 146 NTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS--ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKF 223 (406)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 223 (406)
++....+....... ........+.+++|+|+|+++++++ .++.|.+||..+++....+..+...+.+++|+|++++
T Consensus 121 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 121 GEVKGRLVLDDRKR--TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp CCEEEEEESCCCCC--CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CeeEEEEecCCCcc--ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 65444433210000 0000112368899999999877765 4789999999999888776645556889999999999
Q ss_pred EEEEeCCCCEEEEEcCCCeeeeecccC---CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC
Q 015490 224 LVSLGNRGPGRVWDLASSAVATPLAKE---NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR 300 (406)
Q Consensus 224 l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 300 (406)
+++++.++.+.+||..+++....+... ....+..++|+|+++. +.++...++.|.+||..+++.+..+....
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR-----AFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE-----EEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE-----EEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 999999999999999999887766541 2335678999999985 34455667999999999999888777554
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC
Q 015490 301 EPVSSFNVSADGKLLAVGT-ASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD 364 (406)
Q Consensus 301 ~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d 364 (406)
. ..++|+|+|+++++++ .++.|.+||+.+++.+..+. ....+.+++|+|+|++|+++..+
T Consensus 274 ~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD--TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp C--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE--CCSEEEEEEECTTSCEEEEEEEC
T ss_pred C--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe--cCCCCCeEEEcCCCCEEEEEEcc
Confidence 2 5799999999776666 58999999999999888875 34568999999999977766655
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=1.9e-22 Score=182.56 Aligned_cols=248 Identities=11% Similarity=0.088 Sum_probs=189.9
Q ss_pred CCCCceEEEEccCCCeEEEEecC------CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEE-E
Q 015490 112 DSDLPYRMAIHPHGDGIICALQN------SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA-A 184 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~ 184 (406)
....+..++|+|++++++++..+ ...|+.|+..+++....+ .....+..++|+|+|++++ +
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~------------~~~~~~~~~~~s~dg~~l~v~ 106 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI------------HNDLKPFGATINNTTQTLWFG 106 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE------------EESSCCCSEEEETTTTEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE------------ecCCCcceEEECCCCCEEEEE
Confidence 34567899999999999887732 567888887755443332 2334567889999998555 4
Q ss_pred eeCCCeEEEEeCCCcceEeeeeccCC---------ceeEEEEccCCCEEEEEe--CCCCEEEEEcCCCeeeeecccCCcc
Q 015490 185 GSENGNLRVFKWPSLEIILNESEAHA---------SVKDLSFSPDGKFLVSLG--NRGPGRVWDLASSAVATPLAKENDE 253 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~~~~~~~~~~---------~i~~~~~s~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~ 253 (406)
...++.|.+||..+++....+..+.. .+.+++|+|+++++++++ .++.|.+||..+++....+... ..
T Consensus 107 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~ 185 (353)
T 3vgz_A 107 NTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-GK 185 (353)
T ss_dssp ETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-CT
T ss_pred ecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-CC
Confidence 45579999999999988777665432 278899999999887776 4788999999999988877632 22
Q ss_pred eEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee----cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEE
Q 015490 254 LFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV----VREPVSSFNVSADGKLLAVGTA-SGDISIID 328 (406)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d 328 (406)
.+..++|+|+++. + .....++.|.+||..+++....+.. +...+..++|+|+++++++++. ++.|.+||
T Consensus 186 ~~~~~~~s~dg~~-----l-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 186 MSTGLALDSEGKR-----L-YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp TCCCCEEETTTTE-----E-EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred ccceEEECCCCCE-----E-EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3567899999984 2 2335589999999999998877765 3456788999999998877766 58999999
Q ss_pred CCCceEEEEeecccccceEEEEEcCCCCeEEEEE-CCCcEEEEEecCCcCCCCc
Q 015490 329 SSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS-MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 329 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s-~dg~i~iw~~~~~~~~~~~ 381 (406)
+.+++.+..+.. .. ...++|+|+|+++++++ .++.|.+||+.+++.+..+
T Consensus 260 ~~~~~~~~~~~~-~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 260 TRNGNILAKVAA-PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTTCCEEEEEEC-SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEEEc-CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 999998887762 22 25799999999766555 6899999999988765443
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=4.9e-23 Score=204.02 Aligned_cols=272 Identities=15% Similarity=0.135 Sum_probs=184.5
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEeccc---ccceeecceeccceee----e
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVE---NTEIRRLGVKISEKVL----S 162 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~----~ 162 (406)
.++.|+..+. ....+..+...+.+++|+|||++|+++.++.+.+|+.+... ++........ ..... .
T Consensus 102 ~i~~~d~~~~-----~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~-~~~~~~g~~~ 175 (706)
T 2z3z_A 102 GLVGFDMLAR-----KVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDG-TETLVYGQAV 175 (706)
T ss_dssp EEEEEETTTT-----EEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCC-BTTEEESSCC
T ss_pred EEEEEECCCC-----ceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCC-CCCeEcccch
Confidence 5667776552 34456667888999999999999999877766555543200 3222111110 00000 0
Q ss_pred cccccCcEEEEEECCCCCEEEEee---------------------------------CCCeEEEEeCCCcceEeeee--c
Q 015490 163 QLENVGQQLALTFDSEGTIFAAGS---------------------------------ENGNLRVFKWPSLEIILNES--E 207 (406)
Q Consensus 163 ~~~~~~~v~~~~~s~~g~~l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~--~ 207 (406)
.-+....+.++.|||||++|++++ .+..|++||+.+++...... .
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 000112357899999999999987 44689999999887654432 2
Q ss_pred cCCceeEEEEccCCCEEEEEeCCC-----CEEEEEcCCCeeeeecc-cCCcc---eEEEEEEEc--CCCCceEEEEEEEc
Q 015490 208 AHASVKDLSFSPDGKFLVSLGNRG-----PGRVWDLASSAVATPLA-KENDE---LFASCRFSP--LNNEDYVLYIAAIT 276 (406)
Q Consensus 208 ~~~~i~~~~~s~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~-~~~~~---~~~~~~~~~--~~~~~~~l~~~~~~ 276 (406)
+...+.+++|+|||++|++++.++ .|++||+.+++....+. ..... .+..++|+| +++. ++++
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~------l~~~ 329 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQF------IWQS 329 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEE------EEEE
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEE------EEEE
Confidence 345789999999999999987765 89999999983333322 22221 235689999 8862 3444
Q ss_pred CCCcEEEEEeCC-CceEEEEeeecCCCeEE-EEEcCCCCEEEEEeCC-C----cEEEEECCCceEEEEeecccccceEEE
Q 015490 277 DRGASIVTWNTT-TWKRIRTKQVVREPVSS-FNVSADGKLLAVGTAS-G----DISIIDSSSLQVRTAVKKAHLGIVTAL 349 (406)
Q Consensus 277 ~~~~~i~~~d~~-~~~~~~~~~~~~~~i~~-~~~sp~~~~l~~~~~d-g----~i~i~d~~~~~~~~~~~~~~~~~v~~~ 349 (406)
..++.+++|++. +++.+..+..+...+.. ++|+|+|+.|++++.+ + .|+.||+.+++ ...+ .|...+.++
T Consensus 330 ~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l--~~~~~~~~~ 406 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL--TPESGMHRT 406 (706)
T ss_dssp CTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES--CCSSSEEEE
T ss_pred ccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec--cCCCceEEE
Confidence 667777777765 56677777777777876 7999999988766553 3 67777887765 3344 366779999
Q ss_pred EEcCCCCeEEEEECC----CcEEEEEecCCc
Q 015490 350 AFSYDSRALVSASMD----SSVRVTVIEDKK 376 (406)
Q Consensus 350 ~~sp~~~~l~s~s~d----g~i~iw~~~~~~ 376 (406)
+|+|||++++..+.+ +.|++||+.+++
T Consensus 407 ~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 407 QLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 999999988876443 469999998775
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=4.4e-23 Score=204.93 Aligned_cols=267 Identities=12% Similarity=0.054 Sum_probs=182.3
Q ss_pred EEEEEecCCCCccccceeEEecCCC---CceEEEEccCCCeEEEEec-C-------CeEEEEEecccccceeecceeccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSD---LPYRMAIHPHGDGIICALQ-N-------SCRLFEWDEVENTEIRRLGVKISE 158 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~~~~~-~-------~~~i~~~~~~~~~~~~~~~~~~~~ 158 (406)
.+..|+..+. +....+.+|.. .|.+++|||||++|+++.+ . ...+|.|+..+++. ..+
T Consensus 38 ~i~~~d~~~g----~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l------ 106 (723)
T 1xfd_A 38 TVRLWNVETN----TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSL------ 106 (723)
T ss_dssp CEEEBCGGGC----CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EEC------
T ss_pred CEEEEECCCC----cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-Eec------
Confidence 4666776553 24455566654 4999999999999998863 2 14666777655432 111
Q ss_pred eeeeccc-ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCce------------------eEEEEcc
Q 015490 159 KVLSQLE-NVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASV------------------KDLSFSP 219 (406)
Q Consensus 159 ~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i------------------~~~~~s~ 219 (406)
.... +...+..++|||||+.|++++. +.|++||+.+++.......+...+ .+++|||
T Consensus 107 ---~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 107 ---DPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp ---CCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred ---cCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 1111 2234778999999999999876 799999999887665444433333 7899999
Q ss_pred CCCEEEEEeCCC----------------------------------CEEEEEcCCCeeeeecccC-----CcceEEEEEE
Q 015490 220 DGKFLVSLGNRG----------------------------------PGRVWDLASSAVATPLAKE-----NDELFASCRF 260 (406)
Q Consensus 220 ~~~~l~s~s~d~----------------------------------~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~ 260 (406)
||++|++++.|+ .|++||+.+++....+..+ +...+..++|
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 262 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW 262 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEE
Confidence 999999987543 7999999988765555433 2456889999
Q ss_pred EcCCCCceEEEEEEE-cCCCcEEEEEeCCCceEEEEeeec-CCCe----EEEEEcCCCCEEEEE--eCCC------cEEE
Q 015490 261 SPLNNEDYVLYIAAI-TDRGASIVTWNTTTWKRIRTKQVV-REPV----SSFNVSADGKLLAVG--TASG------DISI 326 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~-~~~i----~~~~~sp~~~~l~~~--~~dg------~i~i 326 (406)
+|+++. ++.... +..+..|++||+.+++....+..+ ...+ ..++|+|||+.|+.. ..++ .|++
T Consensus 263 SpDg~~---l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~ 339 (723)
T 1xfd_A 263 ATSTKV---AVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITV 339 (723)
T ss_dssp SSSSEE---EEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEE
T ss_pred eCCCeE---EEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEE
Confidence 999973 212211 234578999999998876665443 3333 378999999977754 4566 5777
Q ss_pred EE-CCCceE--EEEeecccccceEE-EEEcCCCCeEEEEECC---CcEEEEEecCC
Q 015490 327 ID-SSSLQV--RTAVKKAHLGIVTA-LAFSYDSRALVSASMD---SSVRVTVIEDK 375 (406)
Q Consensus 327 ~d-~~~~~~--~~~~~~~~~~~v~~-~~~sp~~~~l~s~s~d---g~i~iw~~~~~ 375 (406)
|| ..++.. ...+. .+...+.. ++|+|||+.|+..+.+ +.+++|++...
T Consensus 340 ~d~~~~~~~~~~~~l~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 340 SSSQPNSSNDNIQSIT-SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp ECSSCCSSSCCCCBSC-CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EeccCCCCccceeEee-cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 77 344441 44443 23344444 6999999999876655 78999999653
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.4e-22 Score=208.92 Aligned_cols=195 Identities=15% Similarity=0.155 Sum_probs=153.8
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeec-----------cCCceeEEEEc-cCCCEEEEEeCCCCEEEE
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESE-----------AHASVKDLSFS-PDGKFLVSLGNRGPGRVW 236 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~i~~~~~s-~~~~~l~s~s~d~~i~iw 236 (406)
.+...+|+|||+.++++ .++.|++|++..... ..+.. +...+.+++|+ |||++|++++ ++.+++|
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~ 322 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQ 322 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEE
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEE
Confidence 35567999999988887 488999999854433 34433 22368999999 9999999888 7899999
Q ss_pred EcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEE-EEeCCCceEEEEeeecCCCeEEEEEcCCCCEE
Q 015490 237 DLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIV-TWNTTTWKRIRTKQVVREPVSSFNVSADGKLL 315 (406)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l 315 (406)
++.+++... +..+....+..++|+ +++. ++.. +.+..++ +||+.+++.. .+..+...+..++|+|||++|
T Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~-----l~~~-s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~l 393 (1045)
T 1k32_A 323 DVSGTYVLK-VPEPLRIRYVRRGGD-TKVA-----FIHG-TREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFA 393 (1045)
T ss_dssp CTTSSBEEE-CSCCSCEEEEEECSS-SEEE-----EEEE-ETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEE
T ss_pred cCCCCceEE-ccCCCcceEEeeeEc-CCCe-----EEEE-ECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEE
Confidence 998776544 443433368899999 8764 2222 2377888 9999887654 344666789999999999999
Q ss_pred EEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC----------cEEEEEecCCc
Q 015490 316 AVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS----------SVRVTVIEDKK 376 (406)
Q Consensus 316 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg----------~i~iw~~~~~~ 376 (406)
++++.++.|++||+.+++...... .|.+.+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 394 a~~~~~~~v~~~d~~tg~~~~~~~-~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 394 VVANDRFEIMTVDLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred EEECCCCeEEEEECCCCceEEecc-CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 999999999999999998877764 7888999999999999999887654 89999998765
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=3.4e-21 Score=175.08 Aligned_cols=265 Identities=14% Similarity=0.151 Sum_probs=180.2
Q ss_pred CccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec-----CCeEEEEEecccccceeecceecccee
Q 015490 86 RNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ-----NSCRLFEWDEVENTEIRRLGVKISEKV 160 (406)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
...+.++.++.....+ ..+... +...+..++|+|+|++|++++. +.+.+|.++..++... .
T Consensus 26 ~~~i~~~~~d~~~g~~--~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~----------~ 91 (361)
T 3scy_A 26 SKGIYTFRFNEETGES--LPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH----------L 91 (361)
T ss_dssp CCEEEEEEEETTTCCE--EEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE----------E
T ss_pred CCCEEEEEEeCCCCCE--EEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE----------E
Confidence 3567888888876543 223333 7788899999999999988874 5777788876433211 1
Q ss_pred eeccc-ccCcEEEEEECCCCCEEEEee-CCCeEEEEeCCCcceEeeee---cc-----------CCceeEEEEccCCCEE
Q 015490 161 LSQLE-NVGQQLALTFDSEGTIFAAGS-ENGNLRVFKWPSLEIILNES---EA-----------HASVKDLSFSPDGKFL 224 (406)
Q Consensus 161 ~~~~~-~~~~v~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~~~~~~---~~-----------~~~i~~~~~s~~~~~l 224 (406)
+.... +......+++ ++++|++++ .++.|.+|++.....+.... .+ ...+.+++|+|+|+++
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 11111 2345667777 888777765 57899999997543322111 11 1235789999999977
Q ss_pred EEEe-CCCCEEEEEcCCCee------e------eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce
Q 015490 225 VSLG-NRGPGRVWDLASSAV------A------TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK 291 (406)
Q Consensus 225 ~s~s-~d~~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~ 291 (406)
++++ .++.+.+|++..... + .............++|+|+++. +.++...++.|.+||+.+++
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~-----l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKF-----AYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSE-----EEEEETTTCEEEEEEEETTE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCE-----EEEEcCCCCeEEEEEecCCc
Confidence 6665 478999999875431 1 1222233445678999999984 44555678999999998765
Q ss_pred E--EEEeee---cCCCeEEEEEcCCCCEEEEEeCC--CcEEEEECC--Cce--EEEEeecccccceEEEEEcCCCCeEEE
Q 015490 292 R--IRTKQV---VREPVSSFNVSADGKLLAVGTAS--GDISIIDSS--SLQ--VRTAVKKAHLGIVTALAFSYDSRALVS 360 (406)
Q Consensus 292 ~--~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d--g~i~i~d~~--~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~s 360 (406)
. +..+.. +......++|+|||++|+++..+ +.|.+|++. +++ .+..+. . ...+.+++|+|||++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEE
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEE
Confidence 4 222222 22446799999999999777665 889999985 344 344443 2 456889999999999888
Q ss_pred EE-CCCcEEEEEec
Q 015490 361 AS-MDSSVRVTVIE 373 (406)
Q Consensus 361 ~s-~dg~i~iw~~~ 373 (406)
++ .++.|.+|+++
T Consensus 323 ~~~~~~~v~v~~~d 336 (361)
T 3scy_A 323 ACRDTNVIQIFERD 336 (361)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEEE
Confidence 87 67899997765
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=5.9e-23 Score=204.58 Aligned_cols=254 Identities=14% Similarity=0.124 Sum_probs=180.5
Q ss_pred CCCceEEEEccCCCeEEEEec--C---CeEEEEEecccccceeecceeccc----------eee---ecccccCcEEEEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQ--N---SCRLFEWDEVENTEIRRLGVKISE----------KVL---SQLENVGQQLALT 174 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~--~---~~~i~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~v~~~~ 174 (406)
...|.+++|+|||++|++++. + ...||.|+..+++....+...... ... ..+.+...+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567899999999999998874 3 237777877665543332211000 000 0000012377899
Q ss_pred ECCCCCEEEEeeCCCeEEEEeCCCcc--eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCc
Q 015490 175 FDSEGTIFAAGSENGNLRVFKWPSLE--IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKEND 252 (406)
Q Consensus 175 ~s~~g~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 252 (406)
|||||++|++++. +.|++||+.++. ....+..+...+.+++|||||++|++++. +.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9999999999886 899999998873 34456666678999999999999998884 5899999998877655443322
Q ss_pred ce---------------EEEEEEEcCCCCceEEEEEEEcC------------------------------CCcEEEEEeC
Q 015490 253 EL---------------FASCRFSPLNNEDYVLYIAAITD------------------------------RGASIVTWNT 287 (406)
Q Consensus 253 ~~---------------~~~~~~~~~~~~~~~l~~~~~~~------------------------------~~~~i~~~d~ 287 (406)
.. +..++|+|+++. +++..... ....|++||+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~---l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSA---IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSC---EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred ceeccccceeeeeccccccceEECCCCCE---EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 11 357999999996 21211111 1128899999
Q ss_pred CC-ceEEEEee--ecCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCceEEEEeeccccc----ceEEEEEcCCC
Q 015490 288 TT-WKRIRTKQ--VVREPVSSFNVSADGKLLAVGTA-----SGDISIIDSSSLQVRTAVKKAHLG----IVTALAFSYDS 355 (406)
Q Consensus 288 ~~-~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~sp~~ 355 (406)
.+ ++...... .+...+.+++| |||++|++++. +..|++||+.+++....+. .+.. .+..++|+|||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEECTTS
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEECCCC
Confidence 88 77654432 25567899999 99999997764 5679999999988777664 3332 45689999999
Q ss_pred CeEEEEECCCcEEEEEec
Q 015490 356 RALVSASMDSSVRVTVIE 373 (406)
Q Consensus 356 ~~l~s~s~dg~i~iw~~~ 373 (406)
+++++++.||.++||.++
T Consensus 349 ~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRID 366 (741)
T ss_dssp CEEEEECTTSSCEEEEEC
T ss_pred eEEEEecCCCccEEEEEc
Confidence 988999999988999886
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.5e-21 Score=176.29 Aligned_cols=272 Identities=13% Similarity=-0.001 Sum_probs=177.1
Q ss_pred EEEEEecCCCCccccceeEEecCC-CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccC
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDS-DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
.+..|+.... +.+..+..+. ..+..++|+|++++++++......|+.|+..+++....+...... .....
T Consensus 22 ~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~-----~~~~~ 92 (349)
T 1jmx_B 22 NLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP-----GEVGR 92 (349)
T ss_dssp EEEEEETTTT----EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST-----TEEEE
T ss_pred eEEEEECCCC----cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc-----ccccc
Confidence 5677777653 3444554433 268899999999988777644446666776655443332210000 00012
Q ss_pred cEEEEEECCCCCEEEEeeCC------------CeEEEEeCCCcceEee--eeccCCceeEEEEccCCCEEEEEeCCCCEE
Q 015490 169 QQLALTFDSEGTIFAAGSEN------------GNLRVFKWPSLEIILN--ESEAHASVKDLSFSPDGKFLVSLGNRGPGR 234 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~d------------g~i~vwd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~ 234 (406)
.+.+++|+|||+++++++.+ +.|.+||+.+++.... ...+...+.+++|+|+|+ +++++. .|.
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~ 169 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIY 169 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEE
Confidence 36789999999999998865 8999999988543322 122334688999999999 666543 499
Q ss_pred EEEcCCCeeeeecccCCcc-----------------------eEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce
Q 015490 235 VWDLASSAVATPLAKENDE-----------------------LFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK 291 (406)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~ 291 (406)
+||+.+++....+...... ....+++++++... .........+..+|..+++
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD-----PATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------------CCCEEEEEEEEEETTTCC
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC-----ccccccceeEEEEeccCCc
Confidence 9999998877665433200 23345555544210 0000011122235555443
Q ss_pred E-EEEeeecCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEE
Q 015490 292 R-IRTKQVVREPVSSFNVSA-DGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRV 369 (406)
Q Consensus 292 ~-~~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~i 369 (406)
. ...+..+...+.+++|+| ++++++++ ++.|.+||+.+++.+..+. ....+.+++|+|+|++|++++.++.|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~v~v 320 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN--LDHTYYCVAFDKKGDKLYLGGTFNDLAV 320 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECSSSSCEEEESBSSEEEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc--CCCCccceEECCCCCEEEEecCCCeEEE
Confidence 2 112223456788999999 99999988 8899999999999888775 3345789999999999988888999999
Q ss_pred EEecCCcCCCCch
Q 015490 370 TVIEDKKKSGGLN 382 (406)
Q Consensus 370 w~~~~~~~~~~~~ 382 (406)
||+++++.+..++
T Consensus 321 ~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 321 FNPDTLEKVKNIK 333 (349)
T ss_dssp EETTTTEEEEEEE
T ss_pred Eeccccceeeeee
Confidence 9999988766554
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=6.6e-22 Score=203.86 Aligned_cols=264 Identities=14% Similarity=0.110 Sum_probs=196.7
Q ss_pred EEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccC
Q 015490 89 VLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (406)
..++.++.... ....+..|. .+..++|+|||+.++++.++. ||.|+.. ...+..+.............+..
T Consensus 226 ~~l~~~~~~g~-----~~~~l~~~~-~~~~~~~SpDG~~la~~~~~~--i~~~d~~-~~~l~~l~~~~~~~~~~~~~~~~ 296 (1045)
T 1k32_A 226 GQIYSTDLDGK-----DLRKHTSFT-DYYPRHLNTDGRRILFSKGGS--IYIFNPD-TEKIEKIEIGDLESPEDRIISIP 296 (1045)
T ss_dssp CEEEEEETTSC-----SCEECCCCC-SSCEEEEEESSSCEEEEETTE--EEEECTT-TCCEEECCCCCCCBCCSEEEECG
T ss_pred eEEEEEeCCCC-----cceEecCCC-CcceeeEcCCCCEEEEEeCCE--EEEecCC-ceEeeeeccCccccccccccccc
Confidence 46777776542 334455555 467889999999999887665 5555552 22222221110001111112334
Q ss_pred cEEEEEEC-CCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeCCCCEE-EEEcCCCeeee
Q 015490 169 QQLALTFD-SEGTIFAAGSENGNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGNRGPGR-VWDLASSAVAT 245 (406)
Q Consensus 169 ~v~~~~~s-~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~d~~i~-iwd~~~~~~~~ 245 (406)
.+.+++|| |||+++++++ ++.|++|++.+++.. .+..+.. .+..++|+ ||+.|++++.++.+. +||+.+++...
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~ 373 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK 373 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE
Confidence 68899999 9999999887 789999999877654 3555666 89999999 999999999888888 99998776543
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCC---
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASG--- 322 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg--- 322 (406)
+. .+...+..++|+|+++. ++.++.++.|++||+.+++.......|...+.+++|||||++|++++.++
T Consensus 374 -l~-~~~~~~~~~~~SpDG~~------la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 374 -FE-ENLGNVFAMGVDRNGKF------AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp -CC-CCCCSEEEEEECTTSSE------EEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSST
T ss_pred -ec-CCccceeeeEECCCCCE------EEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccc
Confidence 33 44556889999999984 33445688999999999988777777888889999999999999887644
Q ss_pred -------cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 323 -------DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 323 -------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
.|++||+.+++ ...+. .|...+..++|+|||++|++++.++...+|+...
T Consensus 446 ~~~~~~~~i~l~d~~~g~-~~~l~-~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK-IFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE-EEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred ccCCCCCeEEEEECCCCc-EEEee-CCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 89999999887 44553 6778889999999999999999988888887643
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.6e-21 Score=174.97 Aligned_cols=236 Identities=11% Similarity=0.085 Sum_probs=166.6
Q ss_pred EEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC-CCeEEEEe
Q 015490 119 MAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE-NGNLRVFK 195 (406)
Q Consensus 119 ~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~vwd 195 (406)
..|.+++.+++++. ++.+.+ |+..+++....+.. +...+ +++|+|+|+++++++. ++.|.+||
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~--~d~~~~~~~~~~~~-----------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d 68 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISF--FSTDTLEILNQITL-----------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIE 68 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEE--EETTTCCEEEEEEC-----------CCCEE-EEEECSSSCEEEEEESTTCEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEE--EeCcccceeeeEEc-----------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEE
Confidence 35667777766665 555554 55554443322211 23445 9999999997666655 88999999
Q ss_pred CCCcce-EeeeeccCCceeEEEEccCCCEEEEEeCCC---CEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEE
Q 015490 196 WPSLEI-ILNESEAHASVKDLSFSPDGKFLVSLGNRG---PGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLY 271 (406)
Q Consensus 196 ~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (406)
+.+++. ...+..+.....+++|+|++++++++..++ .|.+||+.+++....+.... ....++|+|+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~----- 141 (331)
T 3u4y_A 69 TQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY--DAVGIAISPNGNG----- 141 (331)
T ss_dssp CSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT--TEEEEEECTTSSC-----
T ss_pred CCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC--CccceEECCCCCE-----
Confidence 999887 555555555555599999999999555443 89999999998887765433 3579999999986
Q ss_pred EEEEcCCCcE-EEEEeCCCceEE----EEeeecCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCceE---EEEeeccc
Q 015490 272 IAAITDRGAS-IVTWNTTTWKRI----RTKQVVREPVSSFNVSADGKLLAVGT-ASGDISIIDSSSLQV---RTAVKKAH 342 (406)
Q Consensus 272 ~~~~~~~~~~-i~~~d~~~~~~~----~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~ 342 (406)
++++...++. |.+|++.....+ ............++|+|+|+++++++ .++.|.+||+.+++. +..+. +
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~ 219 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--T 219 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--C
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--C
Confidence 3334344556 999998753322 11222345689999999999776655 588999999998887 76665 4
Q ss_pred ccceEEEEEcCCCCeEEEEE-CCCcEEEEEecCCcC
Q 015490 343 LGIVTALAFSYDSRALVSAS-MDSSVRVTVIEDKKK 377 (406)
Q Consensus 343 ~~~v~~~~~sp~~~~l~s~s-~dg~i~iw~~~~~~~ 377 (406)
...+..++|+|||++|++++ .++.|.+||+.+++.
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 46778999999999776554 578899999988765
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=9.9e-22 Score=172.81 Aligned_cols=222 Identities=11% Similarity=0.022 Sum_probs=161.8
Q ss_pred cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-cceEeeeeccC-C
Q 015490 133 QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPS-LEIILNESEAH-A 210 (406)
Q Consensus 133 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~-~ 210 (406)
+....|+.|+..+++. .....+...+.+++|+|+|++|++++ ++.|++||+.+ ++.......+. .
T Consensus 19 ~~~~~i~~~d~~~~~~------------~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKM------------RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATI 85 (297)
T ss_dssp CCCEEEEEEETTTTEE------------EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred CcceeEEEEeCCCCce------------eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccc
Confidence 3445666677654332 22233567899999999999999986 78999999998 77665554553 4
Q ss_pred ceeEEEEccCCCEEEEEe--CCCCEEEEE--cCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEe
Q 015490 211 SVKDLSFSPDGKFLVSLG--NRGPGRVWD--LASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWN 286 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s--~d~~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d 286 (406)
.+.+++|+|++++|++++ .++...||. ..+++ ...+.... .+..++|+|+++. ++.++..++.+.+|+
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~--~~~~~~~spdg~~-----l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL--PSYWHGWSPDGKS-----FTYCGIRDQVFDIYS 157 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS--SEEEEEECTTSSE-----EEEEEEETTEEEEEE
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC--CccceEECCCCCE-----EEEEECCCCceEEEE
Confidence 789999999999999998 334555554 44444 33333322 3778999999985 333445577778887
Q ss_pred C--CCceEEEEeeecCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CceEEEEeecccccceEEEEEcCCCCeEEEEE
Q 015490 287 T--TTWKRIRTKQVVREPVSSFNVSADGKLLAVGT-ASGDISIIDSS-SLQVRTAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 287 ~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
+ .+++ ...+..+...+.+++|+|++++|++++ .++.+++|++. .+.....+. .|...+..++|+|+|++|++++
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 158 MDIDSGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp EETTTCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEE
T ss_pred EECCCCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEE
Confidence 4 4443 455666677899999999999888776 48899999876 444555554 6778899999999999998887
Q ss_pred CC-----------CcEEEEEecCCcC
Q 015490 363 MD-----------SSVRVTVIEDKKK 377 (406)
Q Consensus 363 ~d-----------g~i~iw~~~~~~~ 377 (406)
.+ +.|++||+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCCCCcccccCceEEEEEecCCCCc
Confidence 66 5699999988754
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.9e-20 Score=168.50 Aligned_cols=261 Identities=11% Similarity=0.143 Sum_probs=172.7
Q ss_pred CCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe--cCCeEEEEEec
Q 015490 66 IRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL--QNSCRLFEWDE 143 (406)
Q Consensus 66 ~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~ 143 (406)
+++++.+++++.+. +.+.++.++.....+ ..+..+..+. .+.+++|+|+++++++++ ++.+.+|+++
T Consensus 46 spdg~~l~~~~~~~-------~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~- 114 (343)
T 1ri6_A 46 SPDKRYLYVGVRPE-------FRVLAYRIAPDDGAL--TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE- 114 (343)
T ss_dssp CTTSSEEEEEETTT-------TEEEEEEECTTTCCE--EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE-
T ss_pred CCCCCEEEEeecCC-------CeEEEEEecCCCCce--eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC-
Confidence 34667677665432 245666665433322 2344555444 889999999999888776 5557777664
Q ss_pred ccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee-CCCeEEEEeCCC-cceEe----eeecc-CCceeEEE
Q 015490 144 VENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS-ENGNLRVFKWPS-LEIIL----NESEA-HASVKDLS 216 (406)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~vwd~~~-~~~~~----~~~~~-~~~i~~~~ 216 (406)
.+. .......+.....+.+++|+|+|+++++++ .++.|++||+.+ ++... ....+ ...+.+++
T Consensus 115 -~~~---------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
T 1ri6_A 115 -DGL---------PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV 184 (343)
T ss_dssp -TTE---------EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE
T ss_pred -CCc---------cccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE
Confidence 111 112223334455688999999999888877 889999999987 54432 22222 23788999
Q ss_pred EccCCCEEEEEe-CCCCEEEEEcCC--Cee--eee---cccC--CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEe
Q 015490 217 FSPDGKFLVSLG-NRGPGRVWDLAS--SAV--ATP---LAKE--NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWN 286 (406)
Q Consensus 217 ~s~~~~~l~s~s-~d~~i~iwd~~~--~~~--~~~---~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d 286 (406)
|+|+++++++++ .++.+.+||+.. ++. ... +... ....+..++|+|+++. ++++...++.|.+||
T Consensus 185 ~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~-----l~v~~~~~~~i~v~d 259 (343)
T 1ri6_A 185 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH-----LYACDRTASLITVFS 259 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE-----EEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE-----EEEEecCCCEEEEEE
Confidence 999999776655 789999999953 332 111 2211 1234668999999985 444556789999999
Q ss_pred CC----CceEEEEeeecCCCeEEEEEcCCCCEEEEEe-CCCcEEEE--ECCCceE--EEEeecccccceEEEEEcCCC
Q 015490 287 TT----TWKRIRTKQVVREPVSSFNVSADGKLLAVGT-ASGDISII--DSSSLQV--RTAVKKAHLGIVTALAFSYDS 355 (406)
Q Consensus 287 ~~----~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~--d~~~~~~--~~~~~~~~~~~v~~~~~sp~~ 355 (406)
+. +.+.+..+..+.. +.+++|+|+|++|++++ .++.|.+| |..+++. +..+. ......+++|.++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~--~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 260 VSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA--VGQGPMWVVVNAHE 334 (343)
T ss_dssp ECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE--CSSSCCEEEEEEEC
T ss_pred EcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc--cCCCCeeEEEEccc
Confidence 98 3345555554444 88999999999998888 57999999 4445543 33333 22456677887754
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=5.4e-22 Score=196.58 Aligned_cols=243 Identities=16% Similarity=0.146 Sum_probs=171.4
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
..|.+++|+|| +.++++.++.+.+ |+..+++. .....+...+.+++|||||++|+++ .++.|++
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~--~d~~~~~~------------~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v 145 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVG--FDMLARKV------------TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYI 145 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEE--EETTTTEE------------EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEE
T ss_pred cCceeEEECCC-CeEEEEECCEEEE--EECCCCce------------EEccCCcccccCCcCCCCCCEEEEE-ECCeEEE
Confidence 57999999999 7777777765555 45443321 1112234567789999999999985 6799999
Q ss_pred EeCCC-----cceEeeeeccCCc--------------eeEEEEccCCCEEEEEe--------------------------
Q 015490 194 FKWPS-----LEIILNESEAHAS--------------VKDLSFSPDGKFLVSLG-------------------------- 228 (406)
Q Consensus 194 wd~~~-----~~~~~~~~~~~~~--------------i~~~~~s~~~~~l~s~s-------------------------- 228 (406)
||+.+ ++.......+... +.+++|+|||++|++++
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y 225 (706)
T 2z3z_A 146 ARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYY 225 (706)
T ss_dssp EECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECC
T ss_pred EecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeC
Confidence 99988 7665444333332 48999999999999987
Q ss_pred -------CCCCEEEEEcCCCeeeeeccc-CCcceEEEEEEEcCCCCceEEEEEEEc--CCCcEEEEEeCCCceEEEEee-
Q 015490 229 -------NRGPGRVWDLASSAVATPLAK-ENDELFASCRFSPLNNEDYVLYIAAIT--DRGASIVTWNTTTWKRIRTKQ- 297 (406)
Q Consensus 229 -------~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~d~~~~~~~~~~~- 297 (406)
.+..|++||+.+++....... .+...+..++|+|+++. +++.... .....|++||+.+++....+.
T Consensus 226 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~ 302 (706)
T 2z3z_A 226 PMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI---LYVAEVNRAQNECKVNAYDAETGRFVRTLFV 302 (706)
T ss_dssp CBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE---EEEEEECTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE---EEEEEeCCCCCeeEEEEEECCCCceeeEEEE
Confidence 346799999998886554432 34556889999999985 2221111 112489999999984333332
Q ss_pred ec-CC---CeEEEEEcC--CCCEEEEEeCCCcEEEEECC-CceEEEEeecccccceEE-EEEcCCCCeEEEEECC-C---
Q 015490 298 VV-RE---PVSSFNVSA--DGKLLAVGTASGDISIIDSS-SLQVRTAVKKAHLGIVTA-LAFSYDSRALVSASMD-S--- 365 (406)
Q Consensus 298 ~~-~~---~i~~~~~sp--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~s~d-g--- 365 (406)
.. .. .+.+++|+| ||+++++++.++.++||+++ ++..+..+. .|...+.. ++|+|+|+.|+.++.+ +
T Consensus 303 ~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 22 22 246789999 99999999999999999876 566666664 67777876 7999999988766544 3
Q ss_pred -cEEEEEecCCc
Q 015490 366 -SVRVTVIEDKK 376 (406)
Q Consensus 366 -~i~iw~~~~~~ 376 (406)
.|+.||+.+++
T Consensus 382 ~~l~~~d~~~~~ 393 (706)
T 2z3z_A 382 RHFYCIDIKGGK 393 (706)
T ss_dssp BEEEEEETTCCC
T ss_pred EEEEEEEcCCCC
Confidence 56666665553
No 150
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=7.9e-21 Score=172.99 Aligned_cols=270 Identities=12% Similarity=0.086 Sum_probs=177.7
Q ss_pred cEEEEEEecCCCCccccceeEEe-cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccc
Q 015490 88 AVLLSHFDFASNSLSDQPVAELR-TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLEN 166 (406)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (406)
.+.++.++.....+. .+.... .+...+..++|+|+|++|++++.+.+.+|+++. +++...... ...
T Consensus 15 ~i~~~~~d~~~g~l~--~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~-~g~~~~~~~----------~~~ 81 (365)
T 1jof_A 15 AIFTVQFDDEKLTCK--LIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKS-PTEIVHEAS----------HPI 81 (365)
T ss_dssp EEEEEEEETTTTEEE--EEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEE-TTEEEEEEE----------EEC
T ss_pred cEEEEEEECCCCCEE--EeeEEccCCCCCCcEEEECCCCCEEEEEccceEEEEEECC-CCCEEEeeE----------eec
Confidence 467777777654331 122221 344578999999999999888755667766652 232211110 011
Q ss_pred cCcEEEEEECCCCCE--EEEee-------------CCCeEEEEeCC-CcceEeeee----ccCCceeEEEEccCCCEEEE
Q 015490 167 VGQQLALTFDSEGTI--FAAGS-------------ENGNLRVFKWP-SLEIILNES----EAHASVKDLSFSPDGKFLVS 226 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~--l~~~~-------------~dg~i~vwd~~-~~~~~~~~~----~~~~~i~~~~~s~~~~~l~s 226 (406)
.+.+.+++|+|||++ ++++. .+|.+.+|++. +++....+. .+...+.+++|+|||+++++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 122445899999984 55553 68999999997 455443332 13347899999999998887
Q ss_pred EeC-CCCEEEEEcC-CCeee--eecccC-CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC--CceEEE---Ee
Q 015490 227 LGN-RGPGRVWDLA-SSAVA--TPLAKE-NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT--TWKRIR---TK 296 (406)
Q Consensus 227 ~s~-d~~i~iwd~~-~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~--~~~~~~---~~ 296 (406)
+.. ++.|++||+. +++.. ..+... +...+..++|+|+++. +.+....++.|.+|+.. +++... .+
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~-----l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY-----LYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE-----EEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE-----EEEEECCCCeEEEEEEeCCCCcEEEccceE
Confidence 764 6799999998 66643 223221 2345788999999985 33444567899998764 555421 22
Q ss_pred eec-------CC------CeEEEE-EcCCCCEEEEEeCC-C-----cEEEEECC-CceEEEE--eecccccceEEEEEcC
Q 015490 297 QVV-------RE------PVSSFN-VSADGKLLAVGTAS-G-----DISIIDSS-SLQVRTA--VKKAHLGIVTALAFSY 353 (406)
Q Consensus 297 ~~~-------~~------~i~~~~-~sp~~~~l~~~~~d-g-----~i~i~d~~-~~~~~~~--~~~~~~~~v~~~~~sp 353 (406)
... .. .+..++ |+|||++|++++.+ + .|.+|++. +++.... ....+...+..++|+|
T Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 237 PLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp ESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred EcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 211 11 478999 99999998877653 2 89999996 5654432 1113445567899999
Q ss_pred ---CCCeEEEEECC-CcEEEEEecCC
Q 015490 354 ---DSRALVSASMD-SSVRVTVIEDK 375 (406)
Q Consensus 354 ---~~~~l~s~s~d-g~i~iw~~~~~ 375 (406)
||++|++++.+ +.|.+|+++..
T Consensus 317 ~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 317 CPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999988864 89999999765
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=9.5e-23 Score=202.51 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=167.2
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccC----cEEEEEECCCCCEEEEeeCC--
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG----QQLALTFDSEGTIFAAGSEN-- 188 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~~~~d-- 188 (406)
.+.+++|+|||++++++.++.+++ |+..+++.... +.++. .+.+++|||||++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~--~d~~~g~~~~~------------~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRL--WNVETNTSTVL------------IEGKKIESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEE--BCGGGCCCEEE------------ECTTTTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred cccccEEcCCCcEEEEeCCCCEEE--EECCCCcEEEE------------eccccccccccceEEECCCCCEEEEEecCcc
Confidence 467889999999776644665554 55554433222 22222 48899999999999998764
Q ss_pred -------CeEEEEeCCCcceEeeeec---cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcc-----
Q 015490 189 -------GNLRVFKWPSLEIILNESE---AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDE----- 253 (406)
Q Consensus 189 -------g~i~vwd~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~----- 253 (406)
+.+++||+.+++.. .+.. +...+..++|||||++|++++. +.|++||+.+++.......+...
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDPQ-SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCCE-ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE
T ss_pred ceeecceeeEEEEECCCCceE-eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc
Confidence 78999999988762 2322 2235889999999999999886 79999999988766544432221
Q ss_pred ------------eEEEEEEEcCCCCceEEEEEEEcC-------------------------------CCcEEEEEeCCCc
Q 015490 254 ------------LFASCRFSPLNNEDYVLYIAAITD-------------------------------RGASIVTWNTTTW 290 (406)
Q Consensus 254 ------------~~~~~~~~~~~~~~~~l~~~~~~~-------------------------------~~~~i~~~d~~~~ 290 (406)
.+..++|+|+++. ++...... .+..|++||+.++
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~---la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTR---LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSE---EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ccceeEEEEeccCcceEEECCCCCE---EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 1268999999985 22221111 1238999999988
Q ss_pred eEEEEeeec------CCCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCceEEEEeecccccceE----EEEEcCCCC
Q 015490 291 KRIRTKQVV------REPVSSFNVSADGKLLAVGTA----SGDISIIDSSSLQVRTAVKKAHLGIVT----ALAFSYDSR 356 (406)
Q Consensus 291 ~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~v~----~~~~sp~~~ 356 (406)
+....+..+ ...+.+++|+|||++|++... +..|++||+.+++....+...+...+. .++|+|||+
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~ 318 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR 318 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC
Confidence 765556543 456889999999999877654 357999999998877665433444443 789999999
Q ss_pred eEEE--EECCC------cEEEEE
Q 015490 357 ALVS--ASMDS------SVRVTV 371 (406)
Q Consensus 357 ~l~s--~s~dg------~i~iw~ 371 (406)
.|+. ...++ .|++||
T Consensus 319 ~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 319 KFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp SEEEEEEECCSSSSCEEEEEEEC
T ss_pred eEEEEEecccCCCcceeEEEEEe
Confidence 8775 44666 466666
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=1.6e-21 Score=188.87 Aligned_cols=234 Identities=12% Similarity=0.045 Sum_probs=167.3
Q ss_pred CCCceEEEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEECCCCCEEEEeeC--
Q 015490 113 SDLPYRMAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTFDSEGTIFAAGSE-- 187 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~-- 187 (406)
..+|++++|+|||+.|++++ +++++||.++. + ...+...++ ..+..++|||| +++++++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~--g------------~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~ 85 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG--G------------ETVKLNREPINSVLDPHYGVG-RVILVRDVSK 85 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET--T------------EEEECCSSCCSEECEECTTCS-EEEEEEECST
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC--C------------CcEeeecccccccccccCCCC-eEEEEeccCC
Confidence 45799999999999999875 78889998642 1 112222344 57889999999 77777664
Q ss_pred -CCeEEEEeCCC---cceEeeeeccCCceeEEEEccCCCE-EEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEc
Q 015490 188 -NGNLRVFKWPS---LEIILNESEAHASVKDLSFSPDGKF-LVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSP 262 (406)
Q Consensus 188 -dg~i~vwd~~~---~~~~~~~~~~~~~i~~~~~s~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (406)
+....+|.++. +... .+... ..+...+|+||++. +++.+.++.+.+||+.+++.......+. .+++|+|
T Consensus 86 g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~sp 159 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDI 159 (582)
T ss_dssp TSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEE
T ss_pred CCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECC
Confidence 45556655432 2222 33222 23456788988863 3344445566699999887655443222 5789999
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCceEEEEeec
Q 015490 263 LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASG--DISIIDSSSLQVRTAVKK 340 (406)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~ 340 (406)
+|+. +.+.....+....|++||+.+++.. .+..+...+..++|||||++|+++..++ .|++||+.+++.. .+.
T Consensus 160 DG~~--la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~- 234 (582)
T 3o4h_A 160 RGDL--IAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE- 234 (582)
T ss_dssp ETTE--EEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC-
T ss_pred CCCE--EEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc-
Confidence 9995 1111111122278999999887754 5667778889999999999999888888 8999999988877 543
Q ss_pred ccccceEEEE--------EcCCCCeEEEEECCCcEEEEEe
Q 015490 341 AHLGIVTALA--------FSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 341 ~~~~~v~~~~--------~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
.|...+..++ |+|||.++++++.|+++++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 6777777777 9999988899999999999998
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=6.2e-22 Score=183.95 Aligned_cols=201 Identities=18% Similarity=0.179 Sum_probs=152.5
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc----------eEe-----eeeccCCceeEEEEccCCCEEE----EEe
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE----------IIL-----NESEAHASVKDLSFSPDGKFLV----SLG 228 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~----------~~~-----~~~~~~~~i~~~~~s~~~~~l~----s~s 228 (406)
..++.+++++++.++++++.++ +++|+..... ... ....+...|.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3577899999999999999887 8888753110 010 1112344799999999999999 778
Q ss_pred CCCCEEEEEcCCC--------ee---eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee
Q 015490 229 NRGPGRVWDLASS--------AV---ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ 297 (406)
Q Consensus 229 ~d~~i~iwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~ 297 (406)
.|+.|++||++++ +. ...+. .|...+.+++|+|+... ++++++.|+.|++||++++..+....
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~~-----~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK-DAGGMVIDMKWNPTVPS-----MVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCC-SGGGSEEEEEECSSCTT-----EEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccC-CCCCceEEEEECCCCCC-----EEEEEECCCeEEEEEcCCCcceeecc
Confidence 8999999998765 11 22222 34667999999998554 56677889999999999987776677
Q ss_pred ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec------ccccceEEEEEcCCCCeEEEE-ECCCc----
Q 015490 298 VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK------AHLGIVTALAFSYDSRALVSA-SMDSS---- 366 (406)
Q Consensus 298 ~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~sp~~~~l~s~-s~dg~---- 366 (406)
.|...+.+++|+|+|++|++|+.||.|++||++ ++....+.. .|...|.+++|++++.++++. +.||.
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 788899999999999999999999999999998 555544431 123479999999998877543 34433
Q ss_pred --EEEEEecCCc
Q 015490 367 --VRVTVIEDKK 376 (406)
Q Consensus 367 --i~iw~~~~~~ 376 (406)
+++|++.+.+
T Consensus 269 ~~v~i~~l~~~~ 280 (434)
T 2oit_A 269 PDVVMALLPKKE 280 (434)
T ss_dssp CEEEEEECCCTT
T ss_pred CceEEEEeccCC
Confidence 8999998653
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.8e-20 Score=174.13 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=150.8
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccce---eecceeccceeeecccccCcEEEEEECCCCCEEE----Ee
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEI---RRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA----AG 185 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~----~~ 185 (406)
...+..+++++++.++++++...+++|.......... ...... .......+.+...|.+++|+|+|++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIV-DKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEE-ECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCccccc-ccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 3467899999999999998855577765432100000 000000 011112234456799999999999999 78
Q ss_pred eCCCeEEEEeCCCc--------c---eEeeeeccCCceeEEEEccC-CCEEEEEeCCCCEEEEEcCCCeeeeecccCCcc
Q 015490 186 SENGNLRVFKWPSL--------E---IILNESEAHASVKDLSFSPD-GKFLVSLGNRGPGRVWDLASSAVATPLAKENDE 253 (406)
Q Consensus 186 ~~dg~i~vwd~~~~--------~---~~~~~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~ 253 (406)
+.|+.|++||++++ + ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++........ +..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~-~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP-STV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC-GGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC-CCC
Confidence 89999999998654 1 13344556779999999998 78999999999999999999866554433 456
Q ss_pred eEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-------CCeEEEEEcCCCCEEEEEe-CCC---
Q 015490 254 LFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-------EPVSSFNVSADGKLLAVGT-ASG--- 322 (406)
Q Consensus 254 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~~-~dg--- 322 (406)
.+.+++|+|+++. +++++.|+.|++||.+ ++....+..+. ..+.+++|++++.++++.+ .+|
T Consensus 194 ~v~~v~wspdg~~------lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 194 AVTSVCWSPKGKQ------LAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CEEEEEECTTSSC------EEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred ceeEEEEcCCCCE------EEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 7899999999885 4566789999999998 55555554432 2789999999988776543 343
Q ss_pred ---cEEEEECCCc
Q 015490 323 ---DISIIDSSSL 332 (406)
Q Consensus 323 ---~i~i~d~~~~ 332 (406)
.+++|++.+.
T Consensus 267 ~~~~v~i~~l~~~ 279 (434)
T 2oit_A 267 TSPDVVMALLPKK 279 (434)
T ss_dssp SCCEEEEEECCCT
T ss_pred CCCceEEEEeccC
Confidence 3899999754
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=4e-20 Score=179.01 Aligned_cols=257 Identities=15% Similarity=0.106 Sum_probs=177.6
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCC-CCceEEEEccCCCeEEEEe----cCCeEEEEEe
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDS-DLPYRMAIHPHGDGIICAL----QNSCRLFEWD 142 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~~~~----~~~~~i~~~~ 142 (406)
+++.+++++..+ +.+.++.++. .....+..|. ..+.+++|+|| +.++++. +...+||.++
T Consensus 32 DG~~la~~s~~~-------g~~~lw~~~~-------g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 32 DGDKLLVVGFSE-------GSVNAYLYDG-------GETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp TTTEEEEEEEET-------TEEEEEEEET-------TEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred CCCeEEEEEccC-------CceeEEEEcC-------CCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 677777654311 1345666532 2344555665 68999999999 6555543 2456888888
Q ss_pred c--ccccceeecceeccceeeecccccCcEEEEEECCCCC--EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEc
Q 015490 143 E--VENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT--IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFS 218 (406)
Q Consensus 143 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s 218 (406)
. ..... . +.....+...+|+|||+ .+++++. +.+.+||+.+++..... .+.. .+++|+
T Consensus 97 ~~~~g~~~--~------------l~~~~~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~-~~~~--~~~~~s 158 (582)
T 3o4h_A 97 TSRPGEEQ--R------------LEAVKPMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELA-RLPG--FGFVSD 158 (582)
T ss_dssp TTSTTCCE--E------------CTTSCSBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEE-EESS--CEEEEE
T ss_pred ccCCCccc--c------------ccCCCCceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEee-cCCC--ceEEEC
Confidence 6 32111 1 11222334568888875 3444444 45559999888765433 3333 889999
Q ss_pred cCCCEEEEEeCC----CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCc--EEEEEeCCCceE
Q 015490 219 PDGKFLVSLGNR----GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA--SIVTWNTTTWKR 292 (406)
Q Consensus 219 ~~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~i~~~d~~~~~~ 292 (406)
|||++|++++.+ +.|++||+.+++.. .+.. +...+..++|+|+++. ++ +++.++ .|++||+.+++.
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~-~~~~~~~~~~SpDG~~-----l~-~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDS-GEGSFSSASISPGMKV-----TA-GLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCCE-EECC-SSCEEEEEEECTTSCE-----EE-EEECSSCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eeec-CCCccccceECCCCCE-----EE-EccCCCeeEEEEEcCCCCcE
Confidence 999999988876 77999999888765 3433 3445789999999985 22 445566 999999999887
Q ss_pred EEEeeecCCCeEEEE--------EcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC
Q 015490 293 IRTKQVVREPVSSFN--------VSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD 364 (406)
Q Consensus 293 ~~~~~~~~~~i~~~~--------~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d 364 (406)
. .+..+...+..++ |+|||.++++++.++.+++|++ ++... .+.+.+.+++|+ +++++++++.+
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~----~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 231 E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE----APQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC----CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec----cCCCceEEEEec-CCEEEEEEcCC
Confidence 7 6666665566666 9999999999999999999999 65544 244678899999 99999888877
Q ss_pred Cc---EEEEEec
Q 015490 365 SS---VRVTVIE 373 (406)
Q Consensus 365 g~---i~iw~~~ 373 (406)
.+ +.+|+..
T Consensus 303 ~~p~~l~~~d~~ 314 (582)
T 3o4h_A 303 STPPRIVSLPSG 314 (582)
T ss_dssp TEEEEEEEETTC
T ss_pred CCCCeEEEEcCC
Confidence 54 5555544
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=194.30 Aligned_cols=238 Identities=12% Similarity=0.055 Sum_probs=161.5
Q ss_pred eEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccC----cEEEEEECCCCCEEEEeeC-----
Q 015490 117 YRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG----QQLALTFDSEGTIFAAGSE----- 187 (406)
Q Consensus 117 ~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~~~~----- 187 (406)
.+++|+|+|++++.+.++++++ |+..+++.... +.++. .+.+++|||||++|++++.
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~--~~~~~g~~~~~------------~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVL--YNIETGQSYTI------------LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEE--EESSSCCEEEE------------ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred CccEECCCCeEEEEcCCCCEEE--EEcCCCcEEEE------------EccccccccceeeEEECCCCCeEEEEecCceeE
Confidence 3779999997665555666555 45443332221 22221 3789999999999998876
Q ss_pred ----CCeEEEEeCCCcceE--eeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceE------
Q 015490 188 ----NGNLRVFKWPSLEII--LNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELF------ 255 (406)
Q Consensus 188 ----dg~i~vwd~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~------ 255 (406)
++.|++||+.+++.+ ..+ ...+..++|||||+.|+++. ++.|++||+.+++........+...+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred EeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 789999999988763 122 24688999999999999886 67999999988876543322222111
Q ss_pred -----------EEEEEEcCCCCceEEEEEEEcC--------------------------------CCcEEEEEeCCCceE
Q 015490 256 -----------ASCRFSPLNNEDYVLYIAAITD--------------------------------RGASIVTWNTTTWKR 292 (406)
Q Consensus 256 -----------~~~~~~~~~~~~~~l~~~~~~~--------------------------------~~~~i~~~d~~~~~~ 292 (406)
.+++|+|+++. + +.++.+ ....|++||+.+++.
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~---l-a~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKF---L-AYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSE---E-EEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ceeeeecccCcccEEECCCCCE---E-EEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 47999999985 2 122211 122889999998764
Q ss_pred E--EE------eeecCCCeEEEEEcCCCCEEEEEeCC----CcEEEEE----CCCceEEEEee---cccccceE-----E
Q 015490 293 I--RT------KQVVREPVSSFNVSADGKLLAVGTAS----GDISIID----SSSLQVRTAVK---KAHLGIVT-----A 348 (406)
Q Consensus 293 ~--~~------~~~~~~~i~~~~~sp~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~---~~~~~~v~-----~ 348 (406)
. .. +..+...+.+++|+||++++++.... ..|.+|| +.+++....+. ..|...+. .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 316 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVST 316 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCC
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCc
Confidence 2 11 22356678999999998877775433 2488999 88777655542 35777776 8
Q ss_pred EEEcCCCCeEEE--EECCCc--EEEEEecCCc
Q 015490 349 LAFSYDSRALVS--ASMDSS--VRVTVIEDKK 376 (406)
Q Consensus 349 ~~~sp~~~~l~s--~s~dg~--i~iw~~~~~~ 376 (406)
+.|+|||+.|+. ...+|. |.+|++.+++
T Consensus 317 ~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 317 PVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred cEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 899999996654 445564 5666665543
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=5.6e-19 Score=161.95 Aligned_cols=284 Identities=10% Similarity=0.026 Sum_probs=178.9
Q ss_pred ccCCCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEe
Q 015490 63 SDDIRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWD 142 (406)
Q Consensus 63 ~~~~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~ 142 (406)
+..+|+++.++++...+ +...++.++..... ......+|...+..+.|+|||+.|+.+..+. .||.|+
T Consensus 41 ~~~SpDg~~l~~~~~~~-------g~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~-~l~~~d 108 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFD-------GPWNYYLLDLNTQV----ATQLTEGRGDNTFGGFLSPDDDALFYVKDGR-NLMRVD 108 (388)
T ss_dssp CCBCTTSCEEEEEECTT-------SSCEEEEEETTTCE----EEECCCSSCBCSSSCEECTTSSEEEEEETTT-EEEEEE
T ss_pred ccCCCCCCEEEEEEcCC-------CCceEEEEeCCCCc----eEEeeeCCCCCccceEEcCCCCEEEEEeCCC-eEEEEE
Confidence 34566777777765411 12367788876532 3333445666666789999999999887432 566676
Q ss_pred cccccceeecceeccceeeecccccCcEEE--EEECCCCCEEEEe----------------------eCCCeEEEEeCCC
Q 015490 143 EVENTEIRRLGVKISEKVLSQLENVGQQLA--LTFDSEGTIFAAG----------------------SENGNLRVFKWPS 198 (406)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~~l~~~----------------------~~dg~i~vwd~~~ 198 (406)
..+++....... +...+.. ..+++++++++.. ..+..|.+||+.+
T Consensus 109 ~~~g~~~~~~~~-----------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 109 LATLEENVVYQV-----------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TTTCCEEEEEEC-----------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CCCCcceeeeec-----------hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 665443222111 1122322 3458999988742 2457899999998
Q ss_pred cceEeeeeccCCceeEEEEcc-CCCEEEEEeCC------CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEE
Q 015490 199 LEIILNESEAHASVKDLSFSP-DGKFLVSLGNR------GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLY 271 (406)
Q Consensus 199 ~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (406)
++.. .+..+...+..++|+| ||+.|+.++.+ ..|.++|...+.............+..++|+|+++. +++
T Consensus 178 g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~--l~~ 254 (388)
T 3pe7_A 178 GEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSA--LVY 254 (388)
T ss_dssp CCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSC--EEE
T ss_pred CceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCE--EEE
Confidence 8654 4445556789999999 99999887753 378888886654433332222245778899999996 222
Q ss_pred EEEEcCC--CcEEEEEeCCCceEEEEeeecC--C---CeEEEEEcCCCCEEEEE---------eCCCcEEEEECCCceEE
Q 015490 272 IAAITDR--GASIVTWNTTTWKRIRTKQVVR--E---PVSSFNVSADGKLLAVG---------TASGDISIIDSSSLQVR 335 (406)
Q Consensus 272 ~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~--~---~i~~~~~sp~~~~l~~~---------~~dg~i~i~d~~~~~~~ 335 (406)
. ..... +..|++||+.+++......... . ....+.|+|||+.|+.. ..+..|++||+.+++..
T Consensus 255 ~-~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (388)
T 3pe7_A 255 V-SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH 333 (388)
T ss_dssp E-EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE
T ss_pred E-ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE
Confidence 2 22222 2359999999887433222111 0 01123799999988864 34668999999987764
Q ss_pred EEeeccccc-----------ceEEEEEcCCCCeEEEEE-CCCcEEEEEecCC
Q 015490 336 TAVKKAHLG-----------IVTALAFSYDSRALVSAS-MDSSVRVTVIEDK 375 (406)
Q Consensus 336 ~~~~~~~~~-----------~v~~~~~sp~~~~l~s~s-~dg~i~iw~~~~~ 375 (406)
... .|.. .+.+++|+|||+.|+..+ .+|...||.++-.
T Consensus 334 ~l~--~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 334 RVA--RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred Eec--cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 433 3444 578899999999887665 5777777776544
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=3e-18 Score=154.70 Aligned_cols=225 Identities=10% Similarity=0.061 Sum_probs=149.4
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEe--cCCeEEEEEecccc-cceeecceeccceeeecccccCcEEEEEECCCCCE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICAL--QNSCRLFEWDEVEN-TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTI 181 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 181 (406)
.+..+..+...+..++|+|+|++|+++. ++.+.+|+++.... .....+.. .............+.+++|+|||++
T Consensus 77 ~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~spdg~l 154 (347)
T 3hfq_A 77 KLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH--SGHGPRPEQDGSHIHYTDLTPDNRL 154 (347)
T ss_dssp EEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC--CCCCSSTTCSSCCEEEEEECTTSCE
T ss_pred EeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec--CCCCCCccccCCCceEEEECCCCcE
Confidence 4555566788899999999999888876 56677777753211 11111100 0000000011235889999999997
Q ss_pred EEEeeCCCeEEEEeCC-CcceEe--eeeccC-CceeEEEEccCCCEEEEE-eCCCCEEEEEcCC--Ceee--eecccCC-
Q 015490 182 FAAGSENGNLRVFKWP-SLEIIL--NESEAH-ASVKDLSFSPDGKFLVSL-GNRGPGRVWDLAS--SAVA--TPLAKEN- 251 (406)
Q Consensus 182 l~~~~~dg~i~vwd~~-~~~~~~--~~~~~~-~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~--~~~~--~~~~~~~- 251 (406)
+++...++.|++|++. +++... .+.... ..+..++|+|||++++++ ..++.+.+|++.. ++.. ..+....
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC
Confidence 7666778899999998 454322 122222 267889999999976664 5678999999874 4432 2221111
Q ss_pred ----cceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC---CceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCc
Q 015490 252 ----DELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT---TWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGD 323 (406)
Q Consensus 252 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~ 323 (406)
...+..++|+|+++. +.++...++.|.+||+. ..+.+..+..+...+..++|+|||++|++++. ++.
T Consensus 235 ~~~~~~~~~~i~~spdG~~-----l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHF-----LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp TCCSCCEEEEEEECTTSCE-----EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE
T ss_pred CCCCCCcceeEEECCCCCE-----EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc
Confidence 135778999999985 33445568899999987 23455556555566789999999999988876 488
Q ss_pred EEEE--ECCCceEEE
Q 015490 324 ISII--DSSSLQVRT 336 (406)
Q Consensus 324 i~i~--d~~~~~~~~ 336 (406)
|.+| |..+++...
T Consensus 310 v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 310 ATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEECTTTCCEEE
T ss_pred EEEEEEeCCCCeEEe
Confidence 9999 555666543
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.9e-18 Score=152.82 Aligned_cols=271 Identities=15% Similarity=0.163 Sum_probs=171.0
Q ss_pred CCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe--cCCeEEEEEec
Q 015490 66 IRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL--QNSCRLFEWDE 143 (406)
Q Consensus 66 ~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~ 143 (406)
+++++.++++...+. ..+.+.++.++.....+ +.+.....+...+..+++ ++++++++. ++.+.+|+++.
T Consensus 58 spdg~~l~~~~~~~~----~~~~v~~~~~~~~~g~~--~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 58 SADGKFVYSVNEFSK----DQAAVSAFAFDKEKGTL--HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp CTTSSEEEEEECCSS----TTCEEEEEEEETTTTEE--EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCCCEEEEEEccCC----CCCcEEEEEEeCCCCcE--EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCC
Confidence 456777777654321 12456777777754332 344455556677788888 888888876 55566666543
Q ss_pred ccccceeeccee--ccce-eeecccccCcEEEEEECCCCCEEEEee-CCCeEEEEeCCCcce------E-------eeee
Q 015490 144 VENTEIRRLGVK--ISEK-VLSQLENVGQQLALTFDSEGTIFAAGS-ENGNLRVFKWPSLEI------I-------LNES 206 (406)
Q Consensus 144 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~------~-------~~~~ 206 (406)
......+... .... ..........+.+++|+|||+++++++ .++.|++|++..... + ....
T Consensus 130 --~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 130 --DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp --TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred --CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 2221111000 0000 000011123468899999999666554 478999999875431 1 1122
Q ss_pred ccCCceeEEEEccCCCEEEEEe-CCCCEEEEEcCCCeee--eeccc--CCcceEEEEEEEcCCCCceEEEEEEEcCC-Cc
Q 015490 207 EAHASVKDLSFSPDGKFLVSLG-NRGPGRVWDLASSAVA--TPLAK--ENDELFASCRFSPLNNEDYVLYIAAITDR-GA 280 (406)
Q Consensus 207 ~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~ 280 (406)
.....+..++|+|||+++++++ .++.|.+||+.+++.. ..+.. .+......++|+|+++. +.++... ++
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~-----l~v~~~~~~~ 282 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKY-----LYASNRLKAD 282 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSE-----EEEEECSSSC
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCE-----EEEECCCCCC
Confidence 2334678999999999888777 6889999999877542 22211 12234578999999985 4444455 78
Q ss_pred EEEEEeCC--Cce--EEEEeeecCCCeEEEEEcCCCCEEEEEe-CCCcEEEE--ECCCceEEEEeecccccceEEEEEc
Q 015490 281 SIVTWNTT--TWK--RIRTKQVVREPVSSFNVSADGKLLAVGT-ASGDISII--DSSSLQVRTAVKKAHLGIVTALAFS 352 (406)
Q Consensus 281 ~i~~~d~~--~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~--d~~~~~~~~~~~~~~~~~v~~~~~s 352 (406)
.|.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+| |..+++........+...+.|+.|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99999985 444 3444444 45678999999999999888 57889996 5556766554432355678888886
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=9.2e-20 Score=163.57 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=150.1
Q ss_pred cEEEEEECCCCCEE-EEeeCCCeEEEEeCCCcceEeeeeccC-----CceeEEEEccCCCEEEEEe------------CC
Q 015490 169 QQLALTFDSEGTIF-AAGSENGNLRVFKWPSLEIILNESEAH-----ASVKDLSFSPDGKFLVSLG------------NR 230 (406)
Q Consensus 169 ~v~~~~~s~~g~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~-----~~i~~~~~s~~~~~l~s~s------------~d 230 (406)
.+..++|+|+|+.+ +++..++.|.+||+.+++....+.... ..+.+++|+|+|+++++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47789999999765 455667899999999988776654322 1578899999999998886 57
Q ss_pred CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcC
Q 015490 231 GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSA 310 (406)
Q Consensus 231 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp 310 (406)
+.|.+||+.+++....+... ..+..++|+|+++. +++. ++.|++||+.+++....+..+.. ...+.|+|
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~-----l~~~---~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~ 183 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAP--RQITMLAWARDGSK-----LYGL---GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQP 183 (337)
T ss_dssp CEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSC-----EEEE---SSSEEEEETTTTEEEEEECSTTT-TTTTBCCC
T ss_pred ceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCE-----EEEe---CCeEEEEECCCCcEeeeeecccc-CCCceeCC
Confidence 99999999998887766542 23567899999986 2222 57899999999988877765431 11347899
Q ss_pred CCCEEEEEeCCC------------------------cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCc
Q 015490 311 DGKLLAVGTASG------------------------DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSS 366 (406)
Q Consensus 311 ~~~~l~~~~~dg------------------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~ 366 (406)
+++.++..+..+ .|.+||+.+++........+...+.+++|+|+|++++++ ++.
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe
Confidence 998776554432 468999998877522222455678899999999999887 789
Q ss_pred EEEEEecCCcCCCC
Q 015490 367 VRVTVIEDKKKSGG 380 (406)
Q Consensus 367 i~iw~~~~~~~~~~ 380 (406)
|++||+.+++.+..
T Consensus 262 v~~~d~~~~~~~~~ 275 (337)
T 1pby_B 262 LESFDLEKNASIKR 275 (337)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCcCcce
Confidence 99999988776543
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=1.5e-19 Score=179.76 Aligned_cols=250 Identities=10% Similarity=0.058 Sum_probs=163.5
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC-----
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN----- 188 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----- 188 (406)
....+++|+|||.+++++ ++.+.+ |+..+++....+... ... ........++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~--~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILV--FNAEYGNSSVFLENS----TFD--EFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEE--EETTTCCEEEEECTT----TTT--TCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred ccccccEECCCCcEEEEc-CCcEEE--EECCCCceEEEEech----hhh--hhcccccceEECCCCCEEEEEECCeeeEE
Confidence 345689999999888876 766555 555444332221110 000 001123458999999999998875
Q ss_pred ----CeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceE---------
Q 015490 189 ----GNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELF--------- 255 (406)
Q Consensus 189 ----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~--------- 255 (406)
+.+.+||+.+++.. .+..+...+..++|||||+.|+.+. ++.|++||+.+++..+.........+
T Consensus 88 ~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred EccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 56779999998755 4555666899999999999999885 67999999988775543222211111
Q ss_pred --------EEEEEEcCCCCceEEEEEEEc--------------------------------CCCcEEEEEeCCC---ce-
Q 015490 256 --------ASCRFSPLNNEDYVLYIAAIT--------------------------------DRGASIVTWNTTT---WK- 291 (406)
Q Consensus 256 --------~~~~~~~~~~~~~~l~~~~~~--------------------------------~~~~~i~~~d~~~---~~- 291 (406)
..+.|+|+++. +.+...-. .....|++||+.+ ++
T Consensus 166 ~ee~~~~~~~~~wSpDg~~--la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTF--LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHTSSSSBCEEECTTSSE--EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cchhcCCCcceEECCCCCE--EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 24889999986 22221100 0112689999998 73
Q ss_pred -EEEEeee------cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCce----EE--E-EeecccccceE-----E
Q 015490 292 -RIRTKQV------VREPVSSFNVSADGKLLAVGTA----SGDISIIDSSSLQ----VR--T-AVKKAHLGIVT-----A 348 (406)
Q Consensus 292 -~~~~~~~------~~~~i~~~~~sp~~~~l~~~~~----dg~i~i~d~~~~~----~~--~-~~~~~~~~~v~-----~ 348 (406)
....+.. +...+..++|+|||+.++.... +..|++||+.+++ +. . .+...|...|. .
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~ 323 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE 323 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC
Confidence 2233332 5667899999999997766543 3369999998876 21 1 11124665554 7
Q ss_pred EEEcCCCCeEE-EEEC-CC--cEEEEEecCCc
Q 015490 349 LAFSYDSRALV-SASM-DS--SVRVTVIEDKK 376 (406)
Q Consensus 349 ~~~sp~~~~l~-s~s~-dg--~i~iw~~~~~~ 376 (406)
+.|+|||+.|+ ..+. +| .|++|++.+++
T Consensus 324 p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp CEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred ceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 89999999877 6653 34 57778877654
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=1.9e-19 Score=178.65 Aligned_cols=261 Identities=13% Similarity=0.095 Sum_probs=173.2
Q ss_pred EEEEEecCCCCccccceeEEecCCC---CceEEEEccCCCeEEEEec--------CCeEEEEEecccccceeecceeccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSD---LPYRMAIHPHGDGIICALQ--------NSCRLFEWDEVENTEIRRLGVKISE 158 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~sp~~~~l~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~ 158 (406)
.++.|+..+.. ....+.+|.. .+.+++|||||++|+++++ ....||.|+..+++....
T Consensus 37 ~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~------- 105 (719)
T 1z68_A 37 NIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG------- 105 (719)
T ss_dssp CEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-------
T ss_pred CEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-------
Confidence 45666665532 3334444433 4899999999999998764 135677777665433110
Q ss_pred eeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccC-Cce-----------------eEEEEccC
Q 015490 159 KVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAH-ASV-----------------KDLSFSPD 220 (406)
Q Consensus 159 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i-----------------~~~~~s~~ 220 (406)
..+ ...+..++|||||+.|+++. ++.|++|++.+++......... ..| .+++||||
T Consensus 106 ---~~l--~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD 179 (719)
T 1z68_A 106 ---NEL--PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN 179 (719)
T ss_dssp ---SCC--CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT
T ss_pred ---eec--CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCC
Confidence 011 24577899999999999985 7899999998887654332221 112 48999999
Q ss_pred CCEEEEEeCCC----------------------------------CEEEEEcCCCeee--eecc-----cCCcceEEEEE
Q 015490 221 GKFLVSLGNRG----------------------------------PGRVWDLASSAVA--TPLA-----KENDELFASCR 259 (406)
Q Consensus 221 ~~~l~s~s~d~----------------------------------~i~iwd~~~~~~~--~~~~-----~~~~~~~~~~~ 259 (406)
|++|++++.|. .|++||+.+++.. ..+. ..+...+..++
T Consensus 180 G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (719)
T 1z68_A 180 GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLT 259 (719)
T ss_dssp SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEE
T ss_pred CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeE
Confidence 99999987652 7889999887652 1121 12455688999
Q ss_pred EEcCCCCceEEEEEEEc--CCCcEEEEEe----CCCceEEEEe----eecCCCeE-----EEEEcCCCCEEEE--EeCCC
Q 015490 260 FSPLNNEDYVLYIAAIT--DRGASIVTWN----TTTWKRIRTK----QVVREPVS-----SFNVSADGKLLAV--GTASG 322 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~--~~~~~i~~~d----~~~~~~~~~~----~~~~~~i~-----~~~~sp~~~~l~~--~~~dg 322 (406)
|+|+++ +++ .... .....|++|| ..+++....+ ..+...+. .+.|+|||+.|+. ...+|
T Consensus 260 ~SpD~~---~~~-~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 260 WVTDER---VCL-QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp ESSSSE---EEE-EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EeCCCe---EEE-EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 999964 222 2222 2235688999 8777655444 34555565 7899999996654 33455
Q ss_pred --cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC-----CcEEEEEecC
Q 015490 323 --DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-----SSVRVTVIED 374 (406)
Q Consensus 323 --~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~~~ 374 (406)
.|.+||+.+++ ...+. .+...+..+.++ +++.|+..+.+ +.+++|.+..
T Consensus 336 ~~~l~~~~~~~~~-~~~lt-~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 336 YKHIHYIKDTVEN-AIQIT-SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CEEEEEESSCSTT-CEECS-CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ceEEEEEECCCCc-eEecc-cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 57778887766 33443 455567777777 88877766655 8899998864
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=7e-19 Score=161.29 Aligned_cols=255 Identities=13% Similarity=0.045 Sum_probs=167.3
Q ss_pred cceeEEecCCCCceE-----EEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEE
Q 015490 104 QPVAELRTDSDLPYR-----MAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTF 175 (406)
Q Consensus 104 ~~~~~~~~h~~~v~~-----~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~ 175 (406)
..+..+..|...+.. .+|+|||++|++++ ++...||.++..+++.... ..++ ..+..+.|
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l------------t~~~~~~~~~~~~ 88 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL------------TEGRGDNTFGGFL 88 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC------------CCSSCBCSSSCEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe------------eeCCCCCccceEE
Confidence 355566666655555 78999999999887 4666899998765443221 1222 23335689
Q ss_pred CCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEE--EccCCCEEEEEe----------------------CCC
Q 015490 176 DSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLS--FSPDGKFLVSLG----------------------NRG 231 (406)
Q Consensus 176 s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~--~s~~~~~l~s~s----------------------~d~ 231 (406)
+|||+.|+.++.++.|++||+.+++.......+...+.... +++++++++... .+.
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 99999999999999999999999887655554444444344 489999887432 346
Q ss_pred CEEEEEcCCCeeeeecccCCcceEEEEEEEc-CCCCceEEEEEEEcCC---CcEEEEEeCCCceEEEEeeecC--CCeEE
Q 015490 232 PGRVWDLASSAVATPLAKENDELFASCRFSP-LNNEDYVLYIAAITDR---GASIVTWNTTTWKRIRTKQVVR--EPVSS 305 (406)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~--~~i~~ 305 (406)
.|.+||+.+++...... ....+..+.|+| +++. +++...... ...|+++|...++. ..+..+. ..+..
T Consensus 169 ~l~~~d~~~g~~~~l~~--~~~~~~~~~~sp~dg~~---l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQ--ENQWLGHPIYRPYDDST---VAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTH 242 (388)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEE---EEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEE
T ss_pred eEEEEECCCCceEEeec--CCccccccEECCCCCCE---EEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccccc
Confidence 79999999887554432 233477899999 8875 222221111 44888999876543 3333333 24778
Q ss_pred EEEcCCCCEEEEEeC-CC----cEEEEECCCceEEEEee-cccccc---eEEEEEcCCCCeEEEE---------ECCCcE
Q 015490 306 FNVSADGKLLAVGTA-SG----DISIIDSSSLQVRTAVK-KAHLGI---VTALAFSYDSRALVSA---------SMDSSV 367 (406)
Q Consensus 306 ~~~sp~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~-~~~~~~---v~~~~~sp~~~~l~s~---------s~dg~i 367 (406)
+.|+|||+.|+..+. ++ .|++||+.+++...... .++... ...+.|+|||+.|+.. ..+..|
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 899999998766543 22 39999999887533221 111110 1224799999988754 446689
Q ss_pred EEEEecCCc
Q 015490 368 RVTVIEDKK 376 (406)
Q Consensus 368 ~iw~~~~~~ 376 (406)
++||+.+++
T Consensus 323 ~~~d~~~~~ 331 (388)
T 3pe7_A 323 YVFNMKNGT 331 (388)
T ss_dssp EEEETTTTE
T ss_pred EEEeccCCc
Confidence 999998765
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.6e-17 Score=148.89 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=177.5
Q ss_pred CCCceEEEEccCCCeEEEEecC-C----------------------eEEEEEecccccceeecceeccceeeecccccCc
Q 015490 113 SDLPYRMAIHPHGDGIICALQN-S----------------------CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQ 169 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~-~----------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (406)
-+.|.+++++|+|+.+++...+ . ..|+.++..+++....+. ...-..
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----------~~~~~~ 92 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG----------KNLFYL 92 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC----------TTTCSS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC----------CCccCC
Confidence 3678999999999988776533 1 145666655443322110 012246
Q ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-eEeeee---------ccCCceeEEEEcc-CCCEEEEEe-CCCCEEEEE
Q 015490 170 QLALTFDSEGTIFAAGSENGNLRVFKWPSLE-IILNES---------EAHASVKDLSFSP-DGKFLVSLG-NRGPGRVWD 237 (406)
Q Consensus 170 v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~---------~~~~~i~~~~~s~-~~~~l~s~s-~d~~i~iwd 237 (406)
...++++++|+++++...++.|++||..... .+..+. .+......++++| +++.+++.+ .++.|++||
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 7899999999988888889999999975442 333331 2222688999999 788777776 689999999
Q ss_pred cCCCeeeeecccCC---------cceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEE
Q 015490 238 LASSAVATPLAKEN---------DELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSF 306 (406)
Q Consensus 238 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~ 306 (406)
.+++....+.... -.....++++|++.. +.++...++.|++||..+++.+..+.. +...+.++
T Consensus 173 -~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~-----l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 173 -PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ-----LCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp -TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE-----EEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred -CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE-----EEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 4666666553211 123678999998553 445567789999999998888887743 34578899
Q ss_pred EEcCCCCEEEEE-------eCCCcEEEEECCCceEEEEee--cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 307 NVSADGKLLAVG-------TASGDISIIDSSSLQVRTAVK--KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 307 ~~sp~~~~l~~~-------~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
+++| +..+++. ..+..|++||..+++.+..+. ..+...+.+++++|+|.++++...+++|++|++....+
T Consensus 247 ~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~~ 325 (329)
T 3fvz_A 247 SYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKME 325 (329)
T ss_dssp EEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECSS
T ss_pred eecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcccc
Confidence 9999 4333332 334589999999999888873 24666789999999998888888999999999976443
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1.4e-16 Score=139.56 Aligned_cols=248 Identities=10% Similarity=0.124 Sum_probs=169.8
Q ss_pred cCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEE-CCCCCEEEEeeC-
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTF-DSEGTIFAAGSE- 187 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~~~~~- 187 (406)
++-..+.++++++++..+++.. ++. |+.|+.. ++....+... . ....+...+..+++ .++++++++...
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~--i~~~d~~-g~~~~~~~~~--~---~~~~~~~~p~~i~~~~~~g~l~v~~~~~ 98 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHR--IQIFDKE-GRFKFQFGEC--G---KRDSQLLYPNRVAVVRNSGDIIVTERSP 98 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTE--EEEECTT-SCEEEEECCB--S---SSTTCBSSEEEEEEETTTTEEEEEECGG
T ss_pred CccCCCceEEECCCCCEEEEECCCCE--EEEECCC-CcEEEEeccc--C---CCcccccCceEEEEEcCCCeEEEEcCCC
Confidence 3446688999999998666654 454 4445543 3222222110 0 00012246789999 577777766643
Q ss_pred CCeEEEEeCCCcceEeeeecc-CCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc-CCcceEEEEEEEcCCC
Q 015490 188 NGNLRVFKWPSLEIILNESEA-HASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK-ENDELFASCRFSPLNN 265 (406)
Q Consensus 188 dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 265 (406)
++.|.+|| .+++....+... ...+.+++++++|+.+++...++.|.+||.. ++....+.. .....+..++++++++
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC
Confidence 78999999 566666555332 2468999999999988777778899999964 555554432 2233477899999875
Q ss_pred CceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec--CCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCceEEEEeeccc
Q 015490 266 EDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV--REPVSSFNVSADGKLLAVGTASG-DISIIDSSSLQVRTAVKKAH 342 (406)
Q Consensus 266 ~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~ 342 (406)
+.++...++.|++||.. ++.+..+... ...+..++++++|+++++...++ .|.+||. +++.+..+. .+
T Consensus 177 ------l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~-~~ 247 (286)
T 1q7f_A 177 ------IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE-SK 247 (286)
T ss_dssp ------EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE-ES
T ss_pred ------EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc-cc
Confidence 23444567899999985 4555555443 25689999999999888887776 9999996 466666664 33
Q ss_pred c--cceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 343 L--GIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 343 ~--~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
. ..+.+++++|+|+++++ +.|++|++|++.....+
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 2 34779999999987776 67999999998776554
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=1e-17 Score=164.64 Aligned_cols=252 Identities=17% Similarity=0.065 Sum_probs=168.8
Q ss_pred ceeEEecCCCCce---------EEEEc--cCCCe-EEEEecCCeEEEEEecc--c-ccceeecceeccceeeeccc---c
Q 015490 105 PVAELRTDSDLPY---------RMAIH--PHGDG-IICALQNSCRLFEWDEV--E-NTEIRRLGVKISEKVLSQLE---N 166 (406)
Q Consensus 105 ~~~~~~~h~~~v~---------~~~~s--p~~~~-l~~~~~~~~~i~~~~~~--~-~~~~~~~~~~~~~~~~~~~~---~ 166 (406)
....+..|...+. ...|+ |||+. |+.+.+...+||.++.. . +. ...+. ... +
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~---------~~~~~~~ 128 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT---------PVSAVGG 128 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS---------CCCCSTT
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc---------CCccCCC
Confidence 3455666666666 66666 99999 88877667789998864 2 22 11111 111 2
Q ss_pred cCcEEEEEECCCCCEEEEeeCC----------CeEEEEeCCC------cceEeeee-ccCCceeEEEEccCCCEEEEEeC
Q 015490 167 VGQQLALTFDSEGTIFAAGSEN----------GNLRVFKWPS------LEIILNES-EAHASVKDLSFSPDGKFLVSLGN 229 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~~~~~d----------g~i~vwd~~~------~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~s~ 229 (406)
...+..++|||||+.|++++.+ ..|++||+.+ ++.. .+. .+...+..++|||||++|++++.
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEEC
Confidence 3567899999999999998876 5899999987 5543 444 55567888999999999998875
Q ss_pred C--------CCEEEEEcC-CC--eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCc--EEEEEeCCCceEEEEe
Q 015490 230 R--------GPGRVWDLA-SS--AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA--SIVTWNTTTWKRIRTK 296 (406)
Q Consensus 230 d--------~~i~iwd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~i~~~d~~~~~~~~~~ 296 (406)
+ ..|++||+. ++ .....+...+...+..+.|+|+++. +++++.++ .|++||+.+++.....
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l------~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL------IVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE------EEEECTTSSCEEEEECTTTCCEEESS
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE------EEEECCCCCeEEEEEECCCCceeecc
Confidence 5 379999998 56 2333443333456789999999972 23334555 8888888776654333
Q ss_pred eecCCC--------eEEEEEcCCCCEEEEEeCCCcEEEE--ECCCceEEEEeecccccceEEE-EEcCCCCeEEEEECCC
Q 015490 297 QVVREP--------VSSFNVSADGKLLAVGTASGDISII--DSSSLQVRTAVKKAHLGIVTAL-AFSYDSRALVSASMDS 365 (406)
Q Consensus 297 ~~~~~~--------i~~~~~sp~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~s~dg 365 (406)
..+... +..++|+|+++++++++. +.++|| |+.+++ +..+. .|...+..+ +++++.-++++++.+.
T Consensus 282 ~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~s~~~~~~~~~~~~~~~ 358 (662)
T 3azo_A 282 RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA-GPWTEWAATLTVSGTRAVGVAASPRT 358 (662)
T ss_dssp CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC-SSCCEEEEEEEEETTEEEEEEEETTE
T ss_pred cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec-CCCCeEEEEEecCCCEEEEEEcCCCC
Confidence 322211 467899999999999998 998888 666565 45554 566677766 4443333344555555
Q ss_pred c--EEEEEecCCc
Q 015490 366 S--VRVTVIEDKK 376 (406)
Q Consensus 366 ~--i~iw~~~~~~ 376 (406)
. |.+||+.+++
T Consensus 359 ~~~i~~~d~~~g~ 371 (662)
T 3azo_A 359 AYEVVELDTVTGR 371 (662)
T ss_dssp EEEEEEEETTTCC
T ss_pred CCEEEEEECCCCc
Confidence 4 4444554543
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=1.9e-17 Score=150.60 Aligned_cols=203 Identities=9% Similarity=0.062 Sum_probs=142.1
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCC-CcceEeeeec-cCCceeEEEEccCCCE--EEEEe-------------CC
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWP-SLEIILNESE-AHASVKDLSFSPDGKF--LVSLG-------------NR 230 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~-~~~~~~~~~~-~~~~i~~~~~s~~~~~--l~s~s-------------~d 230 (406)
..+..++|+|||++|++++.+ .|.+|++. +++....... ..+.+.+++|+|||++ +++++ .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 457789999999999998887 99999997 7765432221 1123567999999994 44543 68
Q ss_pred CCEEEEEcC-CCeeeeeccc---CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-CceEE--EEeee--cCC
Q 015490 231 GPGRVWDLA-SSAVATPLAK---ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-TWKRI--RTKQV--VRE 301 (406)
Q Consensus 231 ~~i~iwd~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~~--~~~~~--~~~ 301 (406)
+.+.+|++. +++....+.. .....+.+++|+|+++. ++++...++.|++||+. +++.. ..+.. +..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-----l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY-----LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-----EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-----EEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 899999997 4554433321 23445789999999984 33444456899999998 66543 23332 245
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCcEEEEECC--CceEEE---Eeec------cccc------ceEEEE-EcCCCCeEEEEE
Q 015490 302 PVSSFNVSADGKLLAVGTA-SGDISIIDSS--SLQVRT---AVKK------AHLG------IVTALA-FSYDSRALVSAS 362 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~--~~~~~~---~~~~------~~~~------~v~~~~-~sp~~~~l~s~s 362 (406)
.+..++|+|||+++++++. ++.|.+|+++ +++... .+.. +|.. .+..++ |+|||++|++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 6899999999999988875 6889999765 455421 2211 1222 578999 999999987765
Q ss_pred CC-C-----cEEEEEec-CCc
Q 015490 363 MD-S-----SVRVTVIE-DKK 376 (406)
Q Consensus 363 ~d-g-----~i~iw~~~-~~~ 376 (406)
.+ + +|.+|++. +++
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSC
T ss_pred CCCCCCCCCeEEEEEECCCCC
Confidence 43 2 89999996 443
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=8.4e-19 Score=161.06 Aligned_cols=239 Identities=11% Similarity=0.024 Sum_probs=160.2
Q ss_pred ceEEEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeecccccCc-EEEEEECCCCCEEEEeeCCCeEE
Q 015490 116 PYRMAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQ-QLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 116 v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
+..++|+|||++|+.+. ++...||.++..+++.... ..+... ...+.|+|||++|+.++.++.|+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l------------~~~~~~~~~~~~~spdg~~l~~~~~~~~l~ 105 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQL------------TEGKGDNTFGGFISTDERAFFYVKNELNLM 105 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEEC------------CCSSCBCTTTCEECTTSSEEEEEETTTEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEe------------ecCCCCccccceECCCCCEEEEEEcCCcEE
Confidence 78889999999988775 4556788888765432111 112222 22368999999999999999999
Q ss_pred EEeCCCcceEeeeeccCCceeE-------------------EEEccCCCEEEEE-----eCCCCEEEEEcCCCeeeeecc
Q 015490 193 VFKWPSLEIILNESEAHASVKD-------------------LSFSPDGKFLVSL-----GNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~i~~-------------------~~~s~~~~~l~s~-----s~d~~i~iwd~~~~~~~~~~~ 248 (406)
+||+.+++.......+...... +.|+|+++.++.. ..+..|++||+.+++......
T Consensus 106 ~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~ 185 (396)
T 3c5m_A 106 KVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ 185 (396)
T ss_dssp EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc
Confidence 9999888765444333332222 3567777766654 356689999998887655442
Q ss_pred cCCcceEEEEEEEc-CCCCceEEEEEEEcCCC----cEEEEEeCCCceEEEEeeec--CCCeEEEEEcCCCCEEEEEeCC
Q 015490 249 KENDELFASCRFSP-LNNEDYVLYIAAITDRG----ASIVTWNTTTWKRIRTKQVV--REPVSSFNVSADGKLLAVGTAS 321 (406)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~d 321 (406)
....+..+.|+| ++.. ++ .+..... ..|++||+.+++... +..+ ...+..+.|+|||++|+.++.+
T Consensus 186 --~~~~~~~~~~sp~dg~~---l~-~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 186 --DTAWLGHPIYRPFDDST---VG-FCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp --ESSCEEEEEEETTEEEE---EE-EEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred --CCcccccceECCCCCCE---EE-EEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecC
Confidence 234577899999 6664 22 2222222 579999987655332 3222 2247789999999988777553
Q ss_pred -----CcEEEEECCCceEEEEeecccccceEEEEEcC-CCCeEEEEE----------------CCCcEEEEEecCCcC
Q 015490 322 -----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSY-DSRALVSAS----------------MDSSVRVTVIEDKKK 377 (406)
Q Consensus 322 -----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~s----------------~dg~i~iw~~~~~~~ 377 (406)
+.|++||+.+++...... ... .. +.|+| ||+++++++ .+..|++||+.+++.
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~--~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 259 KGQTDRVIYKANPETLENEEVMV--MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp TTTCCEEEEEECTTTCCEEEEEE--CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCCccceEEEEECCCCCeEEeee--CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 449999998876544332 112 23 89999 999888765 347899999987653
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=4.4e-17 Score=162.01 Aligned_cols=261 Identities=14% Similarity=0.057 Sum_probs=164.3
Q ss_pred EEEEEecCCCCccccceeEEecCCCCc-----eEEEEccCCCeEEEEec-CC-------eEEEEEecccccceeecceec
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLP-----YRMAIHPHGDGIICALQ-NS-------CRLFEWDEVENTEIRRLGVKI 156 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v-----~~~~~sp~~~~l~~~~~-~~-------~~i~~~~~~~~~~~~~~~~~~ 156 (406)
.+..|+..++. ....+.+|.... ..++|||||++|+.+.+ .. ..+|.|+..+++..
T Consensus 37 ~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~------- 105 (740)
T 4a5s_A 37 NILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI------- 105 (740)
T ss_dssp EEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-------
T ss_pred cEEEEECCCCc----eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-------
Confidence 46667765532 344566665432 34789999999988763 22 45677777654321
Q ss_pred cceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeee-ccCCce-----------------eEEEEc
Q 015490 157 SEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNES-EAHASV-----------------KDLSFS 218 (406)
Q Consensus 157 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i-----------------~~~~~s 218 (406)
....+...+...+|||||+.||.+. ++.|++|++.+++...... ++...+ ..+.||
T Consensus 106 -----~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wS 179 (740)
T 4a5s_A 106 -----TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS 179 (740)
T ss_dssp -----CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred -----EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEEC
Confidence 1122346789999999999999884 6899999998877553322 221112 358999
Q ss_pred cCCCEEEEEeCCC------------------------------------CEEEEEcCC---Ce--eeeeccc-----CCc
Q 015490 219 PDGKFLVSLGNRG------------------------------------PGRVWDLAS---SA--VATPLAK-----END 252 (406)
Q Consensus 219 ~~~~~l~s~s~d~------------------------------------~i~iwd~~~---~~--~~~~~~~-----~~~ 252 (406)
|||++|+.++.|. .|++||+.+ ++ ....+.. .+.
T Consensus 180 pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (740)
T 4a5s_A 180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD 259 (740)
T ss_dssp TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC
T ss_pred CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC
Confidence 9999999875322 478899988 63 2222322 245
Q ss_pred ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce----EE--EEe--eecCCCeE-----EEEEcCCCCEEE-EE
Q 015490 253 ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK----RI--RTK--QVVREPVS-----SFNVSADGKLLA-VG 318 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~----~~--~~~--~~~~~~i~-----~~~~sp~~~~l~-~~ 318 (406)
..+..++|+|+++. +++.......+..|++||+.+++ +. ..+ ..+...+. .+.|+|||+.|+ ..
T Consensus 260 ~~~~~~~wspdg~~--~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~ 337 (740)
T 4a5s_A 260 HYLCDVTWATQERI--SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337 (740)
T ss_dssp EEEEEEEEEETTEE--EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE
T ss_pred eEEEEEEEeCCCeE--EEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE
Confidence 67889999999973 23233333445689999998876 21 111 33444433 788999999887 66
Q ss_pred eC-C--CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC-----CcEEEEEe
Q 015490 319 TA-S--GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-----SSVRVTVI 372 (406)
Q Consensus 319 ~~-d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~ 372 (406)
+. + ..|++||+.+++...... ....|..+.+ +|++.|+..+.. +...||.+
T Consensus 338 s~~~G~~~l~~~~~~~~~~~~lT~--g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 338 SNEEGYRHICYFQIDKKDCTFITK--GTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp ECTTSCEEEEEEETTCSSCEESCC--SSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EcCCCceEEEEEECCCCceEeccc--CCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 54 3 458889988766554332 3445555442 446665544432 34555554
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=1.4e-16 Score=143.73 Aligned_cols=242 Identities=8% Similarity=0.036 Sum_probs=162.7
Q ss_pred EEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-c---CCeEEEEEecccccceeecceeccceeeecc
Q 015490 89 VLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-Q---NSCRLFEWDEVENTEIRRLGVKISEKVLSQL 164 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (406)
-.++.++..... ...+ ..+..++|+|||++|+.+. + +...||.++..+++.... .
T Consensus 43 ~~l~~~d~~~~~-----~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l------------~ 101 (347)
T 2gop_A 43 NTIVIENLKNNA-----RRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI------------L 101 (347)
T ss_dssp EEEEEEETTTCC-----EEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE------------E
T ss_pred ceEEEEeCCCCc-----eEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE------------E
Confidence 356667766532 2233 5688999999999998876 2 466799888765432211 1
Q ss_pred cccCcEEEEEECCCCCEEEEeeCC---------------------------CeEEEEeCCCcceEeeeeccCCceeEEEE
Q 015490 165 ENVGQQLALTFDSEGTIFAAGSEN---------------------------GNLRVFKWPSLEIILNESEAHASVKDLSF 217 (406)
Q Consensus 165 ~~~~~v~~~~~s~~g~~l~~~~~d---------------------------g~i~vwd~~~~~~~~~~~~~~~~i~~~~~ 217 (406)
.... +..++|+|||+.|+.++.+ ..|++||+.+++.+..+.. . .+..++|
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~ 178 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIW 178 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEE
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccC
Confidence 1223 8899999999988887642 5799999988876344444 3 7889999
Q ss_pred ccCCCEEEEEeCCC-------CEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcC------CCcEEEE
Q 015490 218 SPDGKFLVSLGNRG-------PGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITD------RGASIVT 284 (406)
Q Consensus 218 s~~~~~l~s~s~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~i~~ 284 (406)
+||| .+++++.+. ...||.+.+++. ..+..+ ..+.. ++|+++. ++ ..... ....|++
T Consensus 179 spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--~~~~~--~spdg~~---l~-~~~~~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 179 HRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK--VSFYA--VDSDGER---IL-LYGKPEKKYMSEHNKLYI 248 (347)
T ss_dssp ETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE--ESEEE--EEECSSC---EE-EEECCSSSCCCSSCEEEE
T ss_pred CCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC--cceee--ECCCCCE---EE-EEEccccCCccccceEEE
Confidence 9999 777776542 445555445543 333322 23333 3999986 22 22212 1468999
Q ss_pred EeCCCceEEEEeeecCCCeEE-EEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEEC
Q 015490 285 WNTTTWKRIRTKQVVREPVSS-FNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASM 363 (406)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~i~~-~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~ 363 (406)
|| +++.......+...+.. +.|+ |+ ++++++.++.++|| +.+++....+ .+.+.|.+++|+| .++++++.
T Consensus 249 ~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~--~~~~~v~~~~~s~--~~~~~~~~ 319 (347)
T 2gop_A 249 YD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA--KGRHWIMGFDVDE--IVVYLKET 319 (347)
T ss_dssp EC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE--CSSSEEEEEEESS--SEEEEEEC
T ss_pred EC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe--cCCCeEEeeeeeC--cEEEEEcC
Confidence 99 55544333344566776 8999 88 88899999999999 8766654443 3577899999999 67777777
Q ss_pred CCcE-EEEEec
Q 015490 364 DSSV-RVTVIE 373 (406)
Q Consensus 364 dg~i-~iw~~~ 373 (406)
++.. .+|.+.
T Consensus 320 ~~~~~~l~~~~ 330 (347)
T 2gop_A 320 ATRLRELFTWD 330 (347)
T ss_dssp SSSCCEEEEES
T ss_pred CCChHHheEeC
Confidence 7765 788876
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=9.2e-17 Score=145.57 Aligned_cols=285 Identities=8% Similarity=0.058 Sum_probs=182.3
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---------CCeE
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---------NSCR 137 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---------~~~~ 137 (406)
++.+.++++..+... . ..-.++.+|..... .+.++..+..+ .++|+|||++++++.. ..-.
T Consensus 13 ~~~~~~yv~~~~~~~---~-~d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~ 82 (361)
T 2oiz_A 13 PQENRIYVMDSVFMH---L-TESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDV 82 (361)
T ss_dssp CGGGEEEEEECCGGG---G-GGCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEE
T ss_pred CCCCEEEEECCCCCc---c-ccCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCE
Confidence 345667766533210 0 01156677765533 44566666555 8999999999998752 1223
Q ss_pred EEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcceEee-eeccCCceeE
Q 015490 138 LFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE--NGNLRVFKWPSLEIILN-ESEAHASVKD 214 (406)
Q Consensus 138 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~vwd~~~~~~~~~-~~~~~~~i~~ 214 (406)
|..|+..+.+....+...+. ...+......++|+|||++|+++.. ++.|.+||+.+++.+.. +.. .. ...
T Consensus 83 v~v~d~~t~~~~~~i~~~~~-----~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~ 155 (361)
T 2oiz_A 83 VEVWDADKLTFEKEISLPPK-----RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWS 155 (361)
T ss_dssp EEEEETTTCCEEEEEEECTT-----BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEE
T ss_pred EEEEECcCCcEEEEEEcCcc-----ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cce
Confidence 44556655554444333110 0111234567899999999998864 57999999999987766 432 22 233
Q ss_pred EEEccCC-CEEEEEeCCCCEEEEEcCC-Ceeee------ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEe
Q 015490 215 LSFSPDG-KFLVSLGNRGPGRVWDLAS-SAVAT------PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWN 286 (406)
Q Consensus 215 ~~~s~~~-~~l~s~s~d~~i~iwd~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d 286 (406)
+.+.|++ ..+++.+.||.+.+|+... ++... .+.... .. ..+.+++++.. + +.. ..++.+.++|
T Consensus 156 v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~-~~-~~~~~~~~g~~---~-~~~--~~~~~v~v~d 227 (361)
T 2oiz_A 156 VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD-DP-IFIAPALDKDK---A-HFV--SYYGNVYSAD 227 (361)
T ss_dssp EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT-SC-BCSCCEECSSE---E-EEE--BTTSEEEEEE
T ss_pred eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC-Cc-eEEEecccCCE---E-EEE--eCCCeEEEEE
Confidence 5677765 5778888999999999865 44431 111111 11 13344666653 2 122 3467899999
Q ss_pred CCCceE--EEEeeec------C----CCeEEEEEcCCCCEEEEEeC-----------CCcEEEEECCCceEEEEeecccc
Q 015490 287 TTTWKR--IRTKQVV------R----EPVSSFNVSADGKLLAVGTA-----------SGDISIIDSSSLQVRTAVKKAHL 343 (406)
Q Consensus 287 ~~~~~~--~~~~~~~------~----~~i~~~~~sp~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~ 343 (406)
+..... ...+... . .....++|+|+++.++++.. .+.|.+||+.+++.+..+. .+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~~ 306 (361)
T 2oiz_A 228 FSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GRD 306 (361)
T ss_dssp CSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CTT
T ss_pred ecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cCC
Confidence 875432 2222110 0 11123789999988887653 3479999999999999986 454
Q ss_pred cceEEEEEcCCCCeEEEEECCCcEEEEEecCC--cCCCC
Q 015490 344 GIVTALAFSYDSRALVSASMDSSVRVTVIEDK--KKSGG 380 (406)
Q Consensus 344 ~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~--~~~~~ 380 (406)
+.+++|+|||++|++++. ++|.+||..++ +.++.
T Consensus 307 --p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 307 --ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp --CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred --eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 899999999999998876 99999999999 66544
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=8.4e-17 Score=147.66 Aligned_cols=289 Identities=10% Similarity=0.038 Sum_probs=173.8
Q ss_pred ccCCCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCC-ceEEEEccCCCeEEEEecCCeEEEEE
Q 015490 63 SDDIRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDL-PYRMAIHPHGDGIICALQNSCRLFEW 141 (406)
Q Consensus 63 ~~~~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~~~~~~~~~i~~~ 141 (406)
+..+++++.+++....+. ...++.++..... ...+..+... ...+.|+|||++|+.+.... .||.|
T Consensus 41 ~~~SpdG~~l~~~~~~~g-------~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-~l~~~ 107 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDG-------NRNYYLLNLETQQ-----AVQLTEGKGDNTFGGFISTDERAFFYVKNEL-NLMKV 107 (396)
T ss_dssp CCBCTTSCEEEEEECTTS-------SCEEEEEETTTTE-----EEECCCSSCBCTTTCEECTTSSEEEEEETTT-EEEEE
T ss_pred CcCCCCCCEEEEEEecCC-------CceEEEEECCCCc-----EEEeecCCCCccccceECCCCCEEEEEEcCC-cEEEE
Confidence 344567777666543211 1256777765532 2333333333 33488999999998887433 57777
Q ss_pred ecccccceeecceecc----ceeeecccccC----cEEEEEECCCCCEEEEe-----eCCCeEEEEeCCCcceEeeeecc
Q 015490 142 DEVENTEIRRLGVKIS----EKVLSQLENVG----QQLALTFDSEGTIFAAG-----SENGNLRVFKWPSLEIILNESEA 208 (406)
Q Consensus 142 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~v~~~~~s~~g~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~ 208 (406)
+..+++.......... ...+....... ....+.|+|+++.++.+ ..+..|++||+.+++.... ..+
T Consensus 108 d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~-~~~ 186 (396)
T 3c5m_A 108 DLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI-HQD 186 (396)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE-EEE
T ss_pred ECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee-ccC
Confidence 7665443222211100 00000000000 00014578888877665 3567899999988776543 345
Q ss_pred CCceeEEEEcc-CCCEEEEEeCC------CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC--
Q 015490 209 HASVKDLSFSP-DGKFLVSLGNR------GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG-- 279 (406)
Q Consensus 209 ~~~i~~~~~s~-~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 279 (406)
...+..+.|+| +++.|+..+.+ ..|.+||+.+++............+..++|+|+++. +++.......
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~ 263 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSA---MAYVSYFKGQTD 263 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSC---EEEEEEETTTCC
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCE---EEEEecCCCCcc
Confidence 55789999999 78877776643 368889987655433333112345778999999986 2222222222
Q ss_pred cEEEEEeCCCceEEEEeeecCCCeEEEEEcC-CCCEEEEEe----------------CCCcEEEEECCCceEEEEeeccc
Q 015490 280 ASIVTWNTTTWKRIRTKQVVREPVSSFNVSA-DGKLLAVGT----------------ASGDISIIDSSSLQVRTAVKKAH 342 (406)
Q Consensus 280 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~~~~ 342 (406)
+.|++||+.+++........ ... +.|+| ||+++++++ .+..|++||+.+++... +. .+
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~-~~ 338 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LC-KH 338 (396)
T ss_dssp EEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EE-EC
T ss_pred ceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-cc-CC
Confidence 55999999887654332222 233 89999 999888764 24689999998876533 32 34
Q ss_pred cc-----------ceEEEEEcCCCCeEEEEEC-CCcEEEEEec
Q 015490 343 LG-----------IVTALAFSYDSRALVSASM-DSSVRVTVIE 373 (406)
Q Consensus 343 ~~-----------~v~~~~~sp~~~~l~s~s~-dg~i~iw~~~ 373 (406)
.. .+..++|+|||+.|+.++. ++...+|.+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 33 2567899999998887764 5665666554
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=6e-17 Score=160.31 Aligned_cols=247 Identities=9% Similarity=-0.020 Sum_probs=168.9
Q ss_pred CCCCceEEEEccCCCeEEEEe--cCC--eEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC
Q 015490 112 DSDLPYRMAIHPHGDGIICAL--QNS--CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE 187 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~--~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 187 (406)
|...+..++|||||++|+.+. ++. ..||.++..+++.... .+ ....+..++|+|||+.|+.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----------~~-~~~~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----------VL-ERVKFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----------EE-EEECSCCEEECTTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----------cc-cCcccceEEEEeCCCEEEEEEE
Confidence 445688999999999999875 222 3777788765543221 01 1122567899999999999887
Q ss_pred CCe----------------EEEEeCCCcceE--eeeec--cCCceeEEEEccCCCEEEEEeC-----CCCEEEEEcCC--
Q 015490 188 NGN----------------LRVFKWPSLEII--LNESE--AHASVKDLSFSPDGKFLVSLGN-----RGPGRVWDLAS-- 240 (406)
Q Consensus 188 dg~----------------i~vwd~~~~~~~--~~~~~--~~~~i~~~~~s~~~~~l~s~s~-----d~~i~iwd~~~-- 240 (406)
++. |++|++.+++.. ..+.. +...+..+.|+|||++|+..+. +..|++||+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc
Confidence 765 999999877621 22222 2335789999999999888764 56899999976
Q ss_pred ----Ce-eeeecccCCcceEEEEEEEcCCCCceEEEEEEEc-CCCcEEEEEeCCCce--EEEEeeecCC--CeEEEEEcC
Q 015490 241 ----SA-VATPLAKENDELFASCRFSPLNNEDYVLYIAAIT-DRGASIVTWNTTTWK--RIRTKQVVRE--PVSSFNVSA 310 (406)
Q Consensus 241 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~d~~~~~--~~~~~~~~~~--~i~~~~~sp 310 (406)
+. ....+..+... .. ..|+++++. +++.... .....|.+||+.++. ....+..+.. .+..++|++
T Consensus 271 ~~~~~~~~~~~l~~~~~~-~~-~~~s~dg~~---l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEG-EY-DYVTNEGTV---FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR 345 (710)
T ss_dssp SSSCSSCCCEEEECSSSS-CE-EEEEEETTE---EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET
T ss_pred cccCCccceEEeeCCCCc-EE-EEEeccCCE---EEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc
Confidence 43 23444433333 22 358888885 3222221 225689999998764 2234444433 578899998
Q ss_pred CCCEEEEEeCCCc--EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEE-E---CCCcEEEEEecCCc
Q 015490 311 DGKLLAVGTASGD--ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSA-S---MDSSVRVTVIEDKK 376 (406)
Q Consensus 311 ~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-s---~dg~i~iw~~~~~~ 376 (406)
++.++++...++. |++||+.+++.+..+. .+.+.+..+.++|++..++.. + ..++|+.||+.+++
T Consensus 346 ~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 346 SNFLVLCYLHDVKNTLQLHDLATGALLKIFP-LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEEC-CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCEEEEEEEECCCCCEEEecC-CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8888888888874 6677886777767775 567788899999998766533 2 34789999998876
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=1.8e-17 Score=149.41 Aligned_cols=238 Identities=13% Similarity=0.043 Sum_probs=151.1
Q ss_pred EEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccC--cEEEEEECCCCCEEE-EeeCCCeEEE
Q 015490 118 RMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVG--QQLALTFDSEGTIFA-AGSENGNLRV 193 (406)
Q Consensus 118 ~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~-~~~~dg~i~v 193 (406)
.+++++++..+++++ ++ .|+.|+..+++....+ .... .+..++|+|+|++++ ++..++.|.+
T Consensus 4 g~~~~~~~~~~v~~~~~~--~v~~~d~~~~~~~~~~------------~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~ 69 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPN--NLHVVDVASDTVYKSC------------VMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 69 (349)
T ss_dssp CCCCCTTCEEEEEEETTT--EEEEEETTTTEEEEEE------------ECSSCCSSCEEEECTTSSEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCC--eEEEEECCCCcEEEEE------------ecCCCCCCceeEECCCCCEEEEEeCCCCcEEE
Confidence 456777777777765 55 4555665544433322 2222 567899999998654 5557899999
Q ss_pred EeCCCcceEeeeeccC------CceeEEEEccCCCEEEEEeCC------------CCEEEEEcCCCeeeeeccc-CCcce
Q 015490 194 FKWPSLEIILNESEAH------ASVKDLSFSPDGKFLVSLGNR------------GPGRVWDLASSAVATPLAK-ENDEL 254 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~s~s~d------------~~i~iwd~~~~~~~~~~~~-~~~~~ 254 (406)
||+.+++....+.... ..+.+++|+|||+++++++.+ +.|.+||+.+++....+.. .....
T Consensus 70 ~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 149 (349)
T 1jmx_B 70 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ 149 (349)
T ss_dssp EETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS
T ss_pred EeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc
Confidence 9999988776655332 237899999999999998865 8999999988543322211 11224
Q ss_pred EEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCC------------------------CeEEEEEcC
Q 015490 255 FASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVRE------------------------PVSSFNVSA 310 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------------~i~~~~~sp 310 (406)
+.+++|+|+++ +++ . ++.|++||..+++....+..+.. ....+++++
T Consensus 150 ~~~~~~s~dg~----l~~--~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T 1jmx_B 150 VYLMRAADDGS----LYV--A---GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK 220 (349)
T ss_dssp CCCEEECTTSC----EEE--E---SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-
T ss_pred ccceeECCCCc----EEE--c---cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC
Confidence 66888999987 222 2 23399999999888776654320 234566666
Q ss_pred CCCEEEEEeCC-CcEEEEECCCceEEEEeecccccceEEEEEcC-CCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 311 DGKLLAVGTAS-GDISIIDSSSLQVRTAVKKAHLGIVTALAFSY-DSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 311 ~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
++......... ..+..+|..+++....-...+...+.+++|+| ++++++++ ++.|.+||+.+++.+..
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE
Confidence 54221111111 11223555554432221123556788999999 99999887 88999999998876443
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=2.3e-17 Score=162.07 Aligned_cols=246 Identities=12% Similarity=0.032 Sum_probs=164.3
Q ss_pred eEEecCCCCceEEEEccCCCeEEEE--e-cCCeEEEEEecccccceeecceeccceeeecccccCcEE---------EEE
Q 015490 107 AELRTDSDLPYRMAIHPHGDGIICA--L-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQL---------ALT 174 (406)
Q Consensus 107 ~~~~~h~~~v~~~~~sp~~~~l~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~ 174 (406)
..+.+|...+..++|++++-+++.. . ++...||.+.. +.....+.. +...+. ...
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~ 83 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRA--DGAEESALP-----------APWNVRNRVFEYSGFPWA 83 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECT--TSCEEESSC-----------TTCCBCCCGGGTCCCCEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECC--CCCcceeCC-----------CCccccccccccCCccce
Confidence 4567899999999999876555555 2 55678888732 222222221 111222 344
Q ss_pred EC--CCCCE-EEEeeC-CCeEEEEeCC--C-cceEeeeec-----cCCceeEEEEccCCCEEEEEeCC----------CC
Q 015490 175 FD--SEGTI-FAAGSE-NGNLRVFKWP--S-LEIILNESE-----AHASVKDLSFSPDGKFLVSLGNR----------GP 232 (406)
Q Consensus 175 ~s--~~g~~-l~~~~~-dg~i~vwd~~--~-~~~~~~~~~-----~~~~i~~~~~s~~~~~l~s~s~d----------~~ 232 (406)
|+ |||+. |+.++. +..|+++++. . ++ ...+.. +...+.+++|+|||+.|++++.+ ..
T Consensus 84 ~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 84 GVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp EECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred eeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 54 99988 776554 5677777765 2 43 334444 34478899999999999998876 57
Q ss_pred EEEEEcCC------Ceeeeecc-cCCcceEEEEEEEcCCCCceEEEEEEEcC-----CCcEEEEEeCC-Cc---eEEEEe
Q 015490 233 GRVWDLAS------SAVATPLA-KENDELFASCRFSPLNNEDYVLYIAAITD-----RGASIVTWNTT-TW---KRIRTK 296 (406)
Q Consensus 233 i~iwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~i~~~d~~-~~---~~~~~~ 296 (406)
|++||+.+ ++.. .+. .+ ...+..++|+|+++. +++..... ....|++||+. ++ +.....
T Consensus 163 i~~~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~SpDG~~---la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVR-ELSDDA-HRFVTGPRLSPDGRQ---AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEETTSTTTTCGGGSE-ESSCSC-SSEECCCEECTTSSE---EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCccccCCcee-EEEecC-CCcccCceECCCCCE---EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 99999987 5443 333 32 345677899999985 22222111 23689999998 56 443334
Q ss_pred eecCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCceEEEEeecccccc--------eEEEEEcCCCCeEEEEECCCc
Q 015490 297 QVVREPVSSFNVSADGKLLAVGTASG--DISIIDSSSLQVRTAVKKAHLGI--------VTALAFSYDSRALVSASMDSS 366 (406)
Q Consensus 297 ~~~~~~i~~~~~sp~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~--------v~~~~~sp~~~~l~s~s~dg~ 366 (406)
..+...+..+.|+|||++++++..++ .|++||+.+++...... .+... +..++|+|+++++++++. +.
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 44467899999999999887877788 67777776666544432 33222 567899999999999988 99
Q ss_pred EEEEEec
Q 015490 367 VRVTVIE 373 (406)
Q Consensus 367 i~iw~~~ 373 (406)
++||.+.
T Consensus 316 ~~l~~~d 322 (662)
T 3azo_A 316 AVLGILD 322 (662)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 9999554
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=3.8e-15 Score=131.23 Aligned_cols=243 Identities=12% Similarity=0.076 Sum_probs=162.6
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAA 184 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 184 (406)
.+..+..+.....+++|+|+++.++..+.....|+.|+..++ ...+. .....+.+++++++|+++++
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~-----------~~~~~~~~l~~~~dg~l~v~ 85 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM-----------HPSHHQNGHCLNKQGHLIAC 85 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE-----------SSCSSEEEEEECTTCCEEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE-----------CCCCCcceeeECCCCcEEEE
Confidence 345555666778899999999944444322236666776533 22111 13356889999999998887
Q ss_pred eeCCCeEEEEeCCCcceEeeeeccC----CceeEEEEccCCCEEEEEeC-----------------CCCEEEEEcCCCee
Q 015490 185 GSENGNLRVFKWPSLEIILNESEAH----ASVKDLSFSPDGKFLVSLGN-----------------RGPGRVWDLASSAV 243 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~s~s~-----------------d~~i~iwd~~~~~~ 243 (406)
...++.|.+||..+++......... ..+.+++++|+|+++++.+. .+.|..++.. ++.
T Consensus 86 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (296)
T 3e5z_A 86 SHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL 164 (296)
T ss_dssp ETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE
T ss_pred ecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE
Confidence 7777899999997877543322211 25678999999998887321 2345555554 433
Q ss_pred eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-CceE---EEEeeecCCCeEEEEEcCCCCEEEEEe
Q 015490 244 ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-TWKR---IRTKQVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
. .+.. .......++|+|+++. + ++...++.|++||+. +++. ...+..+...+..++++++|+++++.
T Consensus 165 ~-~~~~-~~~~~~gi~~s~dg~~-----l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 165 S-APIR-DRVKPNGLAFLPSGNL-----L-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp E-EEEC-CCSSEEEEEECTTSCE-----E-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred E-Eeec-CCCCCccEEECCCCCE-----E-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 2 2222 2334678999999984 3 556678899999986 4443 22332234556789999999866665
Q ss_pred CCCcEEEEECCCceEEEEeecccccceEEEEE-cCCCCeEEEEECCCcEEEEEecCC
Q 015490 320 ASGDISIIDSSSLQVRTAVKKAHLGIVTALAF-SYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 320 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
++.|.+||.. ++.+..+. .+.. +.+++| +|+++.|++++.++ +.-++.++.
T Consensus 236 -~~~v~~~~~~-g~~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVL-TPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEE-CSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred -CCeEEEECCC-CCEEEEEE-CCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 7889999986 77777765 5555 899999 68999888888763 444455444
No 177
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.73 E-value=7.7e-14 Score=126.53 Aligned_cols=285 Identities=8% Similarity=-0.055 Sum_probs=180.9
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---------CCeE
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---------NSCR 137 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---------~~~~ 137 (406)
++.+.++++.+.+.. +...+..+|..... .+.++.....+ .++++|||++++++.. .+-.
T Consensus 30 ~~~~~~yv~~~~~~~-----~~~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 30 ADGRRSYINLPAHHS-----AIIQQWVLDAGSGS----ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCEEEEeCCcccC-----CccEEEEEECCCCe----EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 455777776541211 11166777776533 34555544333 9999999999998751 1223
Q ss_pred EEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcceEee-eeccCCceeE
Q 015490 138 LFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE--NGNLRVFKWPSLEIILN-ESEAHASVKD 214 (406)
Q Consensus 138 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~vwd~~~~~~~~~-~~~~~~~i~~ 214 (406)
|..+|..+.+....+.+.. .. ..........+.|+|||++|+++.. ++.|.++| .+++.+.. +... . +
T Consensus 99 v~viD~~t~~~~~~i~~~~-~~---~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~ 169 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPD-AP---RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---C 169 (373)
T ss_pred EEEEECCCCcEEEEEECCC-cc---ccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---e
Confidence 4455655544444332210 00 0001123457899999999998874 47899999 99988766 4322 2 2
Q ss_pred EEEccCC-CEEEEEeCCCCEEEEEcCCCeeeeecc-----cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC
Q 015490 215 LSFSPDG-KFLVSLGNRGPGRVWDLASSAVATPLA-----KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT 288 (406)
Q Consensus 215 ~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~ 288 (406)
+.+.|++ +.+++.+.||.+.++|. +++...... ...........+.+++.. +++. ...+.+.+.|+.
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~---~~~~~v~vid~~ 242 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR---IVWP---VYSGKILQADIS 242 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE---EEEE---cCCceEEEEecc
Confidence 4455655 35566778999999999 777663321 111222234566777654 2222 246789999987
Q ss_pred Cce--EEEEeeec----------CCCeEEEEEcCCCCEEEEEeC----------CCcEEEEECCCceEEEEeecccccce
Q 015490 289 TWK--RIRTKQVV----------REPVSSFNVSADGKLLAVGTA----------SGDISIIDSSSLQVRTAVKKAHLGIV 346 (406)
Q Consensus 289 ~~~--~~~~~~~~----------~~~i~~~~~sp~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~v 346 (406)
+.. .+..+... ......+.++|+++.++++.. .+.|.++|+.+++.+..+. .....
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~~p 320 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDV 320 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCCCc
Confidence 542 22222211 122445789999998888654 3579999999999999886 33468
Q ss_pred EEEEEcCCCC-eEEEEE-CCCcEEEEEecCCcCCCC
Q 015490 347 TALAFSYDSR-ALVSAS-MDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 347 ~~~~~sp~~~-~l~s~s-~dg~i~iw~~~~~~~~~~ 380 (406)
.++.|+|||+ .++++. .++.|.++|+.+++.+..
T Consensus 321 ~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 8999999999 777776 589999999999987665
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=4.2e-15 Score=128.91 Aligned_cols=244 Identities=11% Similarity=0.042 Sum_probs=164.2
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVF 194 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vw 194 (406)
.+.+++++++|+.++++......|+.++..+.... . ....+...+.+++++++|+++++.. ++.|.+|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-~----------~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~ 92 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-V----------LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTL 92 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E-E----------CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc-e----------EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEE
Confidence 66899999999855524323335555654322111 0 0111224567899999999666655 8899999
Q ss_pred eCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEE
Q 015490 195 KWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAA 274 (406)
Q Consensus 195 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 274 (406)
|................+.+++++++|+.+++...++.|.+|+..+......... .......++++++++ +.+
T Consensus 93 d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~------l~v 165 (270)
T 1rwi_B 93 AAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLNDPDGVAVDNSGN------VYV 165 (270)
T ss_dssp CTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCCSCCCEEECTTCC------EEE
T ss_pred eCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCCCceeEEEeCCCC------EEE
Confidence 9876544322222224689999999999777777788999998665443322211 122356789999886 223
Q ss_pred EcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCC
Q 015490 275 ITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYD 354 (406)
Q Consensus 275 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 354 (406)
+...++.|.+||............+...+.+++++++|+++++...++.|.+||.......... ..+...+.+++++++
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP-FTGLNTPLAVAVDSD 244 (270)
T ss_dssp EEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC-CCSCSCEEEEEECTT
T ss_pred EECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec-cCCCCCceeEEECCC
Confidence 3345689999999876654433333356889999999977777767889999998765443322 133356899999999
Q ss_pred CCeEEEEECCCcEEEEEecCCcCC
Q 015490 355 SRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 355 ~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
|+++++...+++|+++++...+..
T Consensus 245 g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 245 RTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp CCEEEEEGGGTEEEEECCCGGGSC
T ss_pred CCEEEEECCCCEEEEEcCCCcccc
Confidence 998888889999999999887664
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=1.6e-15 Score=136.65 Aligned_cols=223 Identities=14% Similarity=0.090 Sum_probs=151.4
Q ss_pred CCceEEEEccCCCeEEEEe--------cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEe
Q 015490 114 DLPYRMAIHPHGDGIICAL--------QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAG 185 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 185 (406)
..+...++ ||++++... .....||.++..+++.. .+ ..+..++|||||++|+..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-------------~l---~~~~~~~~SpDg~~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-------------FI---ENATMPRISPDGKKIAFM 76 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-------------EE---ESCEEEEECTTSSEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-------------Ec---ccCCCeEECCCCCEEEEE
Confidence 34566777 888887653 12457888887644311 11 457789999999999887
Q ss_pred eCC---C--eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC---------------------------CCE
Q 015490 186 SEN---G--NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR---------------------------GPG 233 (406)
Q Consensus 186 ~~d---g--~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d---------------------------~~i 233 (406)
+.+ + .|.+|++.+++...... ... +..++|+|||+.|+.++.+ ..|
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEE
T ss_pred EeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 654 3 48888888776554333 334 8999999999999888642 568
Q ss_pred EEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-------CcEEEEEeCCCceEEEEeeecCCCeEEE
Q 015490 234 RVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR-------GASIVTWNTTTWKRIRTKQVVREPVSSF 306 (406)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~i~~~ 306 (406)
++||+.+++....+.. . .+..+.|+|++ . ++ ++.... ...|+++| +++. ..+..+ ..+..+
T Consensus 155 ~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~---~~-~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~ 222 (347)
T 2gop_A 155 WIFDTESEEVIEEFEK--P-RFSSGIWHRDK-I---VV-NVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV 222 (347)
T ss_dssp EEEETTTTEEEEEEEE--E-TTCEEEEETTE-E---EE-EEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE
T ss_pred EEEECCCCeEEeeecC--C-CcccccCCCCe-E---EE-EEecccccccccccccEEEeC--CCce-EEeccC-cceeeE
Confidence 9999988876444443 2 46688999987 3 22 222221 34677777 5443 334334 445544
Q ss_pred EEcCCCCEEEEEeCC--------CcEEEEECCCceEEEEeecccccceEE-EEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 307 NVSADGKLLAVGTAS--------GDISIIDSSSLQVRTAVKKAHLGIVTA-LAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 307 ~~sp~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+|||++|+.++.+ ..|.+|| +++..... ..|...+.. +.|+ |+ ++++++.++.+++| +.+++
T Consensus 223 --spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~-~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 223 --DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL-DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp --EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS-TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS
T ss_pred --CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc-ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc
Confidence 9999998887754 3688888 55544333 356777886 9999 88 88899999999999 87543
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=8.3e-15 Score=130.96 Aligned_cols=267 Identities=13% Similarity=0.047 Sum_probs=174.0
Q ss_pred EEEEEecCCCCccccceeEEe--cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc
Q 015490 90 LLSHFDFASNSLSDQPVAELR--TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV 167 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
.+..+|.++..+......... .....+..+.+. +..+.++......|..+|..+++.... +...
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~------------i~~~ 83 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGR------------ITGF 83 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEE------------EECC
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEE------------cCCC
Confidence 566677766443221110001 112345677774 445555543233555567665444333 2334
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccC-----CceeEEEEccCCCEEEEEe--CCCCEEEEEcCC
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAH-----ASVKDLSFSPDGKFLVSLG--NRGPGRVWDLAS 240 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----~~i~~~~~s~~~~~l~s~s--~d~~i~iwd~~~ 240 (406)
.....++++++++++++...++.|.+||..+++....+.... .....+++ ++..++++. .++.|.++|..+
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 567889999998655554478999999999988776655433 14567777 344555554 488999999999
Q ss_pred CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC--------CcEEEEEeCCCceEEEEeeec-CCCeEEEEEcCC
Q 015490 241 SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR--------GASIVTWNTTTWKRIRTKQVV-REPVSSFNVSAD 311 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~i~~~d~~~~~~~~~~~~~-~~~i~~~~~sp~ 311 (406)
++....+.... ....+.++|+++ +++...+.. .+.|.++|..+++....+... ......++++|+
T Consensus 162 ~~~~~~i~~g~--~p~~i~~~~dG~----l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 162 DKVVDELTIGI--QPTSLVMDKYNK----MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp TEEEEEEECSS--CBCCCEECTTSE----EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT
T ss_pred CeEEEEEEcCC--CccceEEcCCCC----EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC
Confidence 98887765432 245788899886 232222110 278999999999887776643 236789999999
Q ss_pred CCEEEEEeCCCcEEEEECCCceEEEE-eecccccceEEEEEcC-CCCeEEEE----ECCCcEEEEEecCCcCCCCc
Q 015490 312 GKLLAVGTASGDISIIDSSSLQVRTA-VKKAHLGIVTALAFSY-DSRALVSA----SMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 312 ~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~sp-~~~~l~s~----s~dg~i~iw~~~~~~~~~~~ 381 (406)
+++|+++.. .|.+||..+++.... +...+......++++| +++.+++. ..++.|.+||.. ++.+..+
T Consensus 236 ~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 236 RDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp SCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred CCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 999988765 899999988775421 1111245688999999 55555665 568899999997 7765554
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=1.5e-15 Score=149.80 Aligned_cols=247 Identities=12% Similarity=0.026 Sum_probs=160.5
Q ss_pred cCCCCceEEEEccCCCeEEEEe--cC--CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL--QN--SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS 186 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~--~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 186 (406)
+|...+.+++|||||++|+.+. ++ ...|+.|+..+++.... ..+.. .....++|+|||+.|+.++
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------~~~~~-~~~~~~~wspDg~~l~~~~ 186 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------DVIEG-GKYATPKWTPDSKGFYYEW 186 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------CCBSC-CTTCCCEECTTSSEEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------cccCc-ccccceEEecCCCEEEEEE
Confidence 4566789999999999998764 22 25677777765543200 00111 1125789999999999998
Q ss_pred CCCe-------------EEEEeCCCcc----eEeeeeccCCceeEEEEccCCCEEEEEeCCC----CEEEEEcCCCeeee
Q 015490 187 ENGN-------------LRVFKWPSLE----IILNESEAHASVKDLSFSPDGKFLVSLGNRG----PGRVWDLASSAVAT 245 (406)
Q Consensus 187 ~dg~-------------i~vwd~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~----~i~iwd~~~~~~~~ 245 (406)
.|.. |++|++.++. .+.....+...+..+.|+|||++|+..+.++ .|++|+..+++. .
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~ 265 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-R 265 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-E
T ss_pred ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-E
Confidence 8766 9999998776 2222223334788999999999988887665 677776655543 3
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEE-cCCCcEEEEEeCCCceE--EEEeeec--CCCeEEEEEcCCCCEEEEEeC
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAI-TDRGASIVTWNTTTWKR--IRTKQVV--REPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~d~~~~~~--~~~~~~~--~~~i~~~~~sp~~~~l~~~~~ 320 (406)
.+..+... .....+ +++. +++... ...++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...
T Consensus 266 ~l~~~~~~-~~~~~~-~~g~----l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 266 LLVKGVGA-KYEVHA-WKDR----FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp EEEECSSC-CEEEEE-ETTE----EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred EeecCCCc-eEEEEe-cCCc----EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 33333332 334445 5543 222222 12468999999987652 2233333 3457888888 6778888888
Q ss_pred CCcEEEEECC-CceEEEEeecccccceEEEEEcCCCCeEEEEE----CCCcEEEEEecCCc
Q 015490 321 SGDISIIDSS-SLQVRTAVKKAHLGIVTALAFSYDSRALVSAS----MDSSVRVTVIEDKK 376 (406)
Q Consensus 321 dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s----~dg~i~iw~~~~~~ 376 (406)
|+..+||.+. +++....+...+.+.+..+.++|++..++... ..++|++||+.+++
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9887777554 35555555422366788889999987766332 34789999998765
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=8.6e-14 Score=124.59 Aligned_cols=249 Identities=11% Similarity=0.070 Sum_probs=162.1
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAA 184 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 184 (406)
....+..+...+.+++|+|+|+.++++..+ ..|+.|+..+++..... ......+.+++++++|+++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~-~~i~~~d~~~~~~~~~~-----------~~~~~~~~~i~~~~dg~l~v~ 103 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFE-GNIFKINPETKEIKRPF-----------VSHKANPAAIKIHKDGRLFVC 103 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTT-CEEEEECTTTCCEEEEE-----------ECSSSSEEEEEECTTSCEEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCC-CEEEEEeCCCCcEEEEe-----------eCCCCCcceEEECCCCcEEEE
Confidence 455666777788999999999965555422 36666776543321110 023467899999999998887
Q ss_pred eeCC----CeEEEEeCCCcceEeeee--ccCCceeEEEEccCCCEEEEEeC------CCCEEEEEcCCCeeeeecccCCc
Q 015490 185 GSEN----GNLRVFKWPSLEIILNES--EAHASVKDLSFSPDGKFLVSLGN------RGPGRVWDLASSAVATPLAKEND 252 (406)
Q Consensus 185 ~~~d----g~i~vwd~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~ 252 (406)
...+ +.|.+||.+++.....+. .....+.+++++|+|+.+++... .+.|..+|..+++...... ..
T Consensus 104 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~ 181 (333)
T 2dg1_A 104 YLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NI 181 (333)
T ss_dssp ECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EE
T ss_pred eCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CC
Confidence 7666 689999988776542222 22347899999999987776653 2456666665544332221 12
Q ss_pred ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceEEEE-----eee-c-CCCeEEEEEcCCCCEEEEEeCCCcE
Q 015490 253 ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKRIRT-----KQV-V-REPVSSFNVSADGKLLAVGTASGDI 324 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~~~~-----~~~-~-~~~i~~~~~sp~~~~l~~~~~dg~i 324 (406)
.....++|+|+++. +.++...++.|++||..+ +..... ... . ...+..++++++|+++++...++.|
T Consensus 182 ~~~~~i~~~~dg~~-----l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 182 SVANGIALSTDEKV-----LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp SSEEEEEECTTSSE-----EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CcccceEECCCCCE-----EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 23678999999874 233344578999999863 322211 111 1 1357889999999988877778899
Q ss_pred EEEECCCceEEEEeeccccc------ceEEEEEcCCCCeEEEEECCC----cEEEEEecC
Q 015490 325 SIIDSSSLQVRTAVKKAHLG------IVTALAFSYDSRALVSASMDS----SVRVTVIED 374 (406)
Q Consensus 325 ~i~d~~~~~~~~~~~~~~~~------~v~~~~~sp~~~~l~s~s~dg----~i~iw~~~~ 374 (406)
.+||. +++.+..+. .+.. .+.+++|+||++.|+.++.++ .-.+|.++.
T Consensus 257 ~~~d~-~g~~~~~~~-~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 257 LVFNK-RGYPIGQIL-IPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp EEECT-TSCEEEEEE-CTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred EEECC-CCCEEEEEE-cCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 99998 466666654 2322 688999999987776555543 345555543
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=4.4e-14 Score=127.95 Aligned_cols=269 Identities=10% Similarity=0.033 Sum_probs=171.4
Q ss_pred ccCCCCCcEEEEEcCCCCC-CCCcCccEEEEEEecCCCCccccceeEEec------CCCCceEEEEccCCCeEEEEe-cC
Q 015490 63 SDDIRRNYYVVLAGGGGAG-NSGIRNAVLLSHFDFASNSLSDQPVAELRT------DSDLPYRMAIHPHGDGIICAL-QN 134 (406)
Q Consensus 63 ~~~~~~~~~~~~~~ggg~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~sp~~~~l~~~~-~~ 134 (406)
...++++++++++...... ..|. ..-.+..||.... +.+.++.. +...+..++++|||++|+++. +.
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~-~~~~v~v~d~~t~----~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGK-RSDVVEVWDADKL----TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSC-EEEEEEEEETTTC----CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred eEECCCCCEEEEEEecccccccCC-CCCEEEEEECcCC----cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 3455677777776421000 0010 1124556666542 34444443 235678999999999999886 32
Q ss_pred CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCC-cceEee------ee
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEG-TIFAAGSENGNLRVFKWPS-LEIILN------ES 206 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~-~~~~~~------~~ 206 (406)
.-.|..|+..+.+....+ +... ....+.+.|++ ..+++.+.||.+.+|++.. ++.... +.
T Consensus 130 ~~~v~v~d~~~~~~~~~~-----------i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 130 ATSIGIVDVAKGDYVEDV-----------TAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp SEEEEEEETTTTEEEEEE-----------GGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred CCeEEEEECCCCcEEEEE-----------ecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 334555666544333220 2222 22235677766 6777888899999999865 444311 11
Q ss_pred ccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee--eecccC------Cc---ceEEEEEEEcCCCCceEEEEEEE
Q 015490 207 EAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA--TPLAKE------ND---ELFASCRFSPLNNEDYVLYIAAI 275 (406)
Q Consensus 207 ~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~------~~---~~~~~~~~~~~~~~~~~l~~~~~ 275 (406)
....+ ..+.+++++..++..+.++.+.++|+...... ..+... .. .....++|+|+++. +|++..
T Consensus 198 ~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~---lyv~~~ 273 (361)
T 2oiz_A 198 VKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR---MYVFMH 273 (361)
T ss_dssp TTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE---EEEEEE
T ss_pred CCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe---EEEEEc
Confidence 11112 23445778888888888999999998754321 111100 00 00112789999875 444333
Q ss_pred -cC-------CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc--eEEEEeecccccc
Q 015490 276 -TD-------RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSL--QVRTAVKKAHLGI 345 (406)
Q Consensus 276 -~~-------~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~ 345 (406)
.+ ....|.+||+.+++.+.++..+. +.+++|+|||++|++++. +.|.+||+.++ +.+..+. .+...
T Consensus 274 ~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~ 349 (361)
T 2oiz_A 274 PDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEA 349 (361)
T ss_dssp SSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSS
T ss_pred cCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCC
Confidence 11 24589999999999999998876 899999999999998887 99999999999 9888874 46677
Q ss_pred eEEEEEcCCCC
Q 015490 346 VTALAFSYDSR 356 (406)
Q Consensus 346 v~~~~~sp~~~ 356 (406)
...++++|+|+
T Consensus 350 P~~~~~~p~G~ 360 (361)
T 2oiz_A 350 SLQVQFHPVGG 360 (361)
T ss_dssp EEEEEECCCSC
T ss_pred cEEEEecCCCC
Confidence 88999999986
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=1.5e-13 Score=130.96 Aligned_cols=260 Identities=12% Similarity=0.042 Sum_probs=176.3
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEe-cCCeEEEEEecc--cccceeecceeccceeeecccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEV--ENTEIRRLGVKISEKVLSQLEN 166 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 166 (406)
.+..+|..+. +.+.++.. ...+..+.|+|||+++++++ ++. |..+|.. +.+.. ..+..
T Consensus 178 ~V~viD~~t~----~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~--V~viD~~~~t~~~v------------~~i~~ 238 (567)
T 1qks_A 178 QIALIDGSTY----EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGK--VNMIDLWMKEPTTV------------AEIKI 238 (567)
T ss_dssp EEEEEETTTC----CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSE--EEEEETTSSSCCEE------------EEEEC
T ss_pred eEEEEECCCC----eEEEEEeC-CCCccceEECCCCCEEEEEcCCCe--EEEEECCCCCCcEe------------EEEec
Confidence 6777777663 34445543 33567999999999999887 444 5555553 33222 22333
Q ss_pred cCcEEEEEEC----CCCCEEEEeeC-CCeEEEEeCCCcceEeeeecc-----------CCceeEEEEccCCCEEE-EEeC
Q 015490 167 VGQQLALTFD----SEGTIFAAGSE-NGNLRVFKWPSLEIILNESEA-----------HASVKDLSFSPDGKFLV-SLGN 229 (406)
Q Consensus 167 ~~~v~~~~~s----~~g~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~-s~s~ 229 (406)
......++|+ |||+++++++. +++|.++|..+.+.+..+... ...+..+..++++..++ ....
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3456789999 69998887765 589999999998887665421 12577888888866544 4456
Q ss_pred CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee-----cCCCeE
Q 015490 230 RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV-----VREPVS 304 (406)
Q Consensus 230 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~i~ 304 (406)
.|.|.++|..+.+...............+.|+|++++ ++++...++.|.++|+.+++.+..+.. |.+.-.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~-----~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY-----FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE-----EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCE-----EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 7899999987754332222223345668899999985 444445678899999999988777655 221111
Q ss_pred EEEEcCCCCEEE-EEe-CCCcEEEEECCC-------ceEEEEeecccccceEEEEEcCCCCeEEEEEC-------CCcEE
Q 015490 305 SFNVSADGKLLA-VGT-ASGDISIIDSSS-------LQVRTAVKKAHLGIVTALAFSYDSRALVSASM-------DSSVR 368 (406)
Q Consensus 305 ~~~~sp~~~~l~-~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~-------dg~i~ 368 (406)
.+ ++|++..+. ++. .++.|.++|..+ .+.+.++. .....-..+..+|++++|.+... .++|.
T Consensus 394 ~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~-~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 394 NF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP-ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred ee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe-cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 22 588755444 443 368999999987 67777775 33333345778999999887663 35899
Q ss_pred EEEecCC
Q 015490 369 VTVIEDK 375 (406)
Q Consensus 369 iw~~~~~ 375 (406)
++|+.+.
T Consensus 472 v~d~~~~ 478 (567)
T 1qks_A 472 VFDIKAM 478 (567)
T ss_dssp EEEGGGC
T ss_pred EEECCcc
Confidence 9999887
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=7.3e-15 Score=145.38 Aligned_cols=244 Identities=11% Similarity=0.040 Sum_probs=159.4
Q ss_pred cCCCeEEEEe--cC--CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCC-----eEEE
Q 015490 123 PHGDGIICAL--QN--SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENG-----NLRV 193 (406)
Q Consensus 123 p~~~~l~~~~--~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~v 193 (406)
|+|++++... .+ ...||..+...++....+... .+ ...+...+..++|||||++||.+..++ .|++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~----~l-~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPN----IL-SDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGG----GG-CTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHH----Hh-ccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 8898887664 22 236787765433321111110 00 001223578899999999998776543 8999
Q ss_pred EeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCC----------------EEEEEcCCCeee--eecccC-Ccce
Q 015490 194 FKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP----------------GRVWDLASSAVA--TPLAKE-NDEL 254 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~----------------i~iwd~~~~~~~--~~~~~~-~~~~ 254 (406)
||+.+++.......+ ..+..++|+|||+.|+.++.++. |++|++.+++.. ..+... +...
T Consensus 156 ~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~ 234 (710)
T 2xdw_A 156 MKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW 234 (710)
T ss_dssp EETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE
Confidence 999999876533322 23678999999999999988766 999999887632 222221 2334
Q ss_pred EEEEEEEcCCCCceEEEEEEEcCC--CcEEEEEeCCC------ce-EEEEeeecCCCeEEEEEcCCCCEEEEEeCC----
Q 015490 255 FASCRFSPLNNEDYVLYIAAITDR--GASIVTWNTTT------WK-RIRTKQVVREPVSSFNVSADGKLLAVGTAS---- 321 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~--~~~i~~~d~~~------~~-~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---- 321 (406)
+..+.|+|+++. +++....+. +..|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+..
T Consensus 235 ~~~~~~SpDg~~---l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 235 MGGAELSDDGRY---VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp EEEEEECTTSCE---EEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTT
T ss_pred EEEEEEcCCCCE---EEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCC
Confidence 678999999985 222222121 67999999986 43 34555555555544 588999988877653
Q ss_pred CcEEEEECCCceE--EEEeeccccc--ceEEEEEcCCCCeEEEEECCCc--EEEEEecCCcC
Q 015490 322 GDISIIDSSSLQV--RTAVKKAHLG--IVTALAFSYDSRALVSASMDSS--VRVTVIEDKKK 377 (406)
Q Consensus 322 g~i~i~d~~~~~~--~~~~~~~~~~--~v~~~~~sp~~~~l~s~s~dg~--i~iw~~~~~~~ 377 (406)
+.|.+||+.++.. ...+. .|.. .+..+.|++++.++++...|+. |++|++.+++.
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGAL 371 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCE
Confidence 3599999987642 23333 3433 6788999988888888888885 55566656654
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=1e-14 Score=130.61 Aligned_cols=240 Identities=12% Similarity=0.017 Sum_probs=162.5
Q ss_pred CCceEEEEccCCCeEEEE-ecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 114 DLPYRMAIHPHGDGIICA-LQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
..|.+++|++++..++.. .++.++.|. . .... ....+...+.+++|+++|++++++..++.|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~-----------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~ 69 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT--A---EPWL-----------EISKKGLQLEGLNFDRQGQLFLLDVFEGNIF 69 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE--C---EEEE-----------EEESSCCCEEEEEECTTSCEEEEETTTCEEE
T ss_pred cccceeeecCCccceeEEeecccCcccc--c---ceeE-----------EEeccCccccCcEECCCCCEEEEECCCCEEE
Confidence 446778888887765544 366667661 1 1111 1112335678999999999888888899999
Q ss_pred EEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC----CCEEEEEcCCCeeeeecc-cCCcceEEEEEEEcCCCCc
Q 015490 193 VFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR----GPGRVWDLASSAVATPLA-KENDELFASCRFSPLNNED 267 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 267 (406)
+||..+++.......+...+.+++++++|+++++...+ +.|.+||..++.....+. ......+..++++|+++
T Consensus 70 ~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-- 147 (333)
T 2dg1_A 70 KINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-- 147 (333)
T ss_dssp EECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC--
T ss_pred EEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC--
Confidence 99998877654433445579999999999987777666 689999998776543332 12334578899999986
Q ss_pred eEEEEEEEcC-----CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC-ceEEEE---
Q 015490 268 YVLYIAAITD-----RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVG-TASGDISIIDSSS-LQVRTA--- 337 (406)
Q Consensus 268 ~~l~~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~-~~~~~~--- 337 (406)
+++ +... ..+.|+.+|..+++..... .....+..++|+|+|+.|+++ +.++.|.+||+.+ +.....
T Consensus 148 --l~v-~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 148 --FYF-TDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp --EEE-EECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred --EEE-EeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 222 2221 1467888887765543322 223457899999999866555 4578999999863 322211
Q ss_pred --ee--cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 338 --VK--KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 338 --~~--~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
.. .++ ..+..++++++|+++++...++.|.+||. +++.
T Consensus 224 ~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 224 TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCE
T ss_pred eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCE
Confidence 10 112 35788999999998888878899999997 3443
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=9.1e-15 Score=145.33 Aligned_cols=246 Identities=11% Similarity=0.043 Sum_probs=157.7
Q ss_pred CCCCceEEEEccCCCeEEEEe--cCC--eEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC
Q 015490 112 DSDLPYRMAIHPHGDGIICAL--QNS--CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE 187 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~--~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 187 (406)
|...+..++|||||++|+.+. ++. ..||.++..+++.... . .....+..++|+|| +.|+.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~-----------~~~~~~~~~~wspD-~~l~~~~~ 227 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-E-----------LKWVKFSGLAWLGN-DALLYSRF 227 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-E-----------EEEEESCCCEESTT-SEEEEEEC
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-c-----------CCCceeccEEEECC-CEEEEEEe
Confidence 444688999999999999876 233 5688888776553221 0 01111246899999 99988876
Q ss_pred CCe--------------EEEEeCCCcce--Eeeeec--cCCceeEEEEccCCCEEEEEeCCC-----CEEEEEcCCC--e
Q 015490 188 NGN--------------LRVFKWPSLEI--ILNESE--AHASVKDLSFSPDGKFLVSLGNRG-----PGRVWDLASS--A 242 (406)
Q Consensus 188 dg~--------------i~vwd~~~~~~--~~~~~~--~~~~i~~~~~s~~~~~l~s~s~d~-----~i~iwd~~~~--~ 242 (406)
++. |++|++.++.. ...+.. +...+..+.|+|||++|+..+.++ .|++||+.++ +
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 307 (741)
T 1yr2_A 228 AEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG 307 (741)
T ss_dssp CCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC
T ss_pred cCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc
Confidence 554 89999877652 122222 222588999999999988877543 7999999877 3
Q ss_pred eeeecccCCcceEEEEEEEcCCCCceEEEEEEE-cCCCcEEEEEeCCCc--eEEEEeeecCCCeEEEEEcCCCCEEEEEe
Q 015490 243 VATPLAKENDELFASCRFSPLNNEDYVLYIAAI-TDRGASIVTWNTTTW--KRIRTKQVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~d~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
....+..+..... .. ++|+++. +++... ...++.|++||+.++ .....+..+...+..++++ ++.++++..
T Consensus 308 ~~~~l~~~~~~~~-~~-~~~dg~~---l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 308 PVTALIPDLKAQW-DF-VDGVGDQ---LWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI 381 (741)
T ss_dssp CCEEEECSSSSCE-EE-EEEETTE---EEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE
T ss_pred ccEEecCCCCceE-EE-EeccCCE---EEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE
Confidence 1344433333322 33 3588875 322222 123678999999874 3333333334456677887 566777778
Q ss_pred CCCcEEEEECC-CceEEEEeecccccceEEEEEcCCCCeEEEE-E---CCCcEEEEEecCCc
Q 015490 320 ASGDISIIDSS-SLQVRTAVKKAHLGIVTALAFSYDSRALVSA-S---MDSSVRVTVIEDKK 376 (406)
Q Consensus 320 ~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-s---~dg~i~iw~~~~~~ 376 (406)
.|+..+||.+. +++....+...+.+.+..+.++|+++.|+.. + ..++|++||+.+++
T Consensus 382 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 382 HDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88876666543 3555555542246778899999998766532 2 34789999998765
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.68 E-value=2.4e-14 Score=128.37 Aligned_cols=291 Identities=8% Similarity=-0.031 Sum_probs=183.7
Q ss_pred CCCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---------CC
Q 015490 65 DIRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---------NS 135 (406)
Q Consensus 65 ~~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---------~~ 135 (406)
.+|+.+.++++..+.... .-.+..+|..+. +.+.++.....+ . ++++|||++++++.. ..
T Consensus 40 ~~pd~~~vyV~~~~~~~~-----~~~V~ViD~~t~----~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAA-----VTQQFVIDGEAG----RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCTTEEEEEECGGGCS-----SEEEEEEETTTT----EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred cCCCCCEEEEEcCcccCC-----CCEEEEEECCCC----eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 356677777775431100 126777787663 345566554454 4 999999999887641 23
Q ss_pred eEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcceEeeeeccCCcee
Q 015490 136 CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE--NGNLRVFKWPSLEIILNESEAHASVK 213 (406)
Q Consensus 136 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~ 213 (406)
-.|..||..+.+....+.+... +. .........++|+|||++++++.. ++.|.++|+.+++.+..+.... .
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g-~r---~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~- 181 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDA-PR---FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C- 181 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTC-CC---CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-
T ss_pred CEEEEEECCCCeEEEEEECCCc-cc---cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-
Confidence 3466677776665555433110 00 001123456899999999888764 6899999999999887774322 1
Q ss_pred EEEEccCCCEEEEEeCCCCEEEEEcCC-Ceeeeecc----cCCcceEEEEEEE-cCCCCceEEEEEEEcCCCcEEEEEeC
Q 015490 214 DLSFSPDGKFLVSLGNRGPGRVWDLAS-SAVATPLA----KENDELFASCRFS-PLNNEDYVLYIAAITDRGASIVTWNT 287 (406)
Q Consensus 214 ~~~~s~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~d~ 287 (406)
...+....+.+++.+.||.+.+.++.+ ++...... ...........|. ++++. + .. +.++.|++.|+
T Consensus 182 ~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~---~--~v--s~~g~V~v~d~ 254 (386)
T 3sjl_D 182 YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL---V--WP--TYTGKIHQIDL 254 (386)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE---E--EE--BTTSEEEEEEC
T ss_pred ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE---E--EE--eCCCEEEEEEC
Confidence 222333455677778888888888865 44322111 1111111224554 45531 2 22 23689999999
Q ss_pred CCce--EEEEeee----------cCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEECCCceEEEEeecccccc
Q 015490 288 TTWK--RIRTKQV----------VREPVSSFNVSADGKLLAVGTA----------SGDISIIDSSSLQVRTAVKKAHLGI 345 (406)
Q Consensus 288 ~~~~--~~~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~ 345 (406)
.+.. ....+.. .......++++++++.+++... .+.|.++|+.+++.+..+..+ ..
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~ 332 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HE 332 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EE
T ss_pred CCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CC
Confidence 7654 2222220 0122345777999998888653 257999999999999998733 47
Q ss_pred eEEEEEcCCCC-eEEEEE-CCCcEEEEEecCCcCCCCch
Q 015490 346 VTALAFSYDSR-ALVSAS-MDSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 346 v~~~~~sp~~~-~l~s~s-~dg~i~iw~~~~~~~~~~~~ 382 (406)
+.++.+++|++ +|++.. .++.|.++|..+++.+.+++
T Consensus 333 ~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 333 IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 88999999997 666654 58999999999999877654
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=6.7e-14 Score=121.56 Aligned_cols=214 Identities=9% Similarity=-0.001 Sum_probs=155.9
Q ss_pred CCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEee
Q 015490 125 GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILN 204 (406)
Q Consensus 125 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~ 204 (406)
++.|++++ ..-+|+.|+..+++...++... ....+.++.++|+|+++++ .++.|..||. +++.+..
T Consensus 5 ~~~lv~~~-~~~~v~~~d~~tG~~~w~~~~~----------~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 5 QHLLVGGS-GWNKIAIINKDTKEIVWEYPLE----------KGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWN 70 (276)
T ss_dssp CEEEEECT-TCSEEEEEETTTTEEEEEEECC----------TTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEE
T ss_pred CcEEEeeC-CCCEEEEEECCCCeEEEEeCCC----------ccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEE
Confidence 44555554 3335666777666666554321 1135788999999998883 4678999998 8888888
Q ss_pred eeccC-CceeEEEEccCCCEEEEEeC-CCCEEEEEcCCCeeeeecccC-----CcceEEEEEEEcCCCCceEEEEEEEcC
Q 015490 205 ESEAH-ASVKDLSFSPDGKFLVSLGN-RGPGRVWDLASSAVATPLAKE-----NDELFASCRFSPLNNEDYVLYIAAITD 277 (406)
Q Consensus 205 ~~~~~-~~i~~~~~s~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (406)
+..+. ..+.++.+.++|+.+++.+. ++.+..+|. +++.+..+... .......+++.++++. +++..
T Consensus 71 ~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~------lv~~~ 143 (276)
T 3no2_A 71 IAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY------LVPLF 143 (276)
T ss_dssp EECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE------EEEET
T ss_pred EcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE------EEEec
Confidence 77653 37889999999999998887 777777775 67666554321 1112334567888873 34556
Q ss_pred CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccc------cceEEEEE
Q 015490 278 RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHL------GIVTALAF 351 (406)
Q Consensus 278 ~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~ 351 (406)
.++.|..||.. ++.+.++... ....++...++|+.+++++.++.|..+|..+++.+.++.. +. ..+..+..
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~l~~~~~~~~ 220 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA-NDIEGVQLFFVAQLFP 220 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG-GGSBSCCCSEEEEEEE
T ss_pred CCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC-CCCCCccccccccceE
Confidence 78999999998 8988888765 3456788899999999988888999999999999888852 21 23778888
Q ss_pred cCCCCeEEEEE
Q 015490 352 SYDSRALVSAS 362 (406)
Q Consensus 352 sp~~~~l~s~s 362 (406)
.++|..+++..
T Consensus 221 ~~~G~i~v~~~ 231 (276)
T 3no2_A 221 LQNGGLYICNW 231 (276)
T ss_dssp CTTSCEEEEEE
T ss_pred cCCCCEEEEec
Confidence 99998887763
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.6e-14 Score=129.19 Aligned_cols=206 Identities=13% Similarity=0.088 Sum_probs=149.9
Q ss_pred CcEEEEEECCCCCEEEEeeCC------------------------CeEEEEeCCCcceEeeeecc-CCceeEEEEccCCC
Q 015490 168 GQQLALTFDSEGTIFAAGSEN------------------------GNLRVFKWPSLEIILNESEA-HASVKDLSFSPDGK 222 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~d------------------------g~i~vwd~~~~~~~~~~~~~-~~~i~~~~~s~~~~ 222 (406)
+.+.+++++|+|+++++...+ +.|.+||..+++........ ......++++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 678999999999999887776 47999999888876554422 23788999999999
Q ss_pred EEEEEeCCCCEEEEEcCCCe-eeeecc--------cCCcceEEEEEEEc-CCCCceEEEEEEEcC-CCcEEEEEeCCCce
Q 015490 223 FLVSLGNRGPGRVWDLASSA-VATPLA--------KENDELFASCRFSP-LNNEDYVLYIAAITD-RGASIVTWNTTTWK 291 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~-~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~-~~~~i~~~d~~~~~ 291 (406)
++++...++.|++||..... .+..+. .........++++| ++. +.++.. .++.|++|| .+++
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~------lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA------VFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC------EEEEECSSCCEEEEEC-TTSC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe------EEEEeCCCCCeEEEEc-CCCC
Confidence 88888888999999986542 333332 11223467899999 554 333443 688999999 4566
Q ss_pred EEEEeeecC----------CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCceEEEEeec-ccccceEEEEEcC------
Q 015490 292 RIRTKQVVR----------EPVSSFNVSAD-GKLLAVGTASGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSY------ 353 (406)
Q Consensus 292 ~~~~~~~~~----------~~i~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp------ 353 (406)
.+..+.... .....++++|+ ++++++...++.|++||..+++.+..+.. .+...+..++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~ 256 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAV 256 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEe
Confidence 666664322 23789999998 66666667789999999998888877742 3556788999999
Q ss_pred CCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 354 DSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 354 ~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
+|+.+++.+.+.+|++|++.+++.+..
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 333333334456899999988876544
No 191
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=8.2e-14 Score=121.92 Aligned_cols=199 Identities=7% Similarity=0.087 Sum_probs=145.7
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeec------cCCceeEEEE-ccCCCEEEEEeC-CCCEEEEEcC
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESE------AHASVKDLSF-SPDGKFLVSLGN-RGPGRVWDLA 239 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~~~~i~~~~~-s~~~~~l~s~s~-d~~i~iwd~~ 239 (406)
..+.+++++++|+++++...++.|.+||.. ++....+.. +...+.++++ .++++.+++... ++.|.+|| .
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~ 107 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q 107 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-C
Confidence 567899999999988888889999999976 555544432 2236789999 467766655533 78999999 5
Q ss_pred CCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEEEEcCCCCEEEE
Q 015490 240 SSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSFNVSADGKLLAV 317 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~ 317 (406)
+++....+.......+..++++++++ +.++...++.|.+||.. ++.+..+.. +...+..++++|+|+++++
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~------l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGR------IIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSC------EEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred CCcEEEEecCccCCCceEEEEeCCCC------EEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 67766666544444578899999886 33444567899999965 455555542 3346899999999997777
Q ss_pred EeCCCcEEEEECCCceEEEEeec-ccccceEEEEEcCCCCeEEEEECCC-cEEEEEecCCcC
Q 015490 318 GTASGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYDSRALVSASMDS-SVRVTVIEDKKK 377 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg-~i~iw~~~~~~~ 377 (406)
...++.|++||.. ++.+..+.. ++...+..++++++|+++++...++ .|.+|+. +++.
T Consensus 181 ~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~ 240 (286)
T 1q7f_A 181 DNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQL 240 (286)
T ss_dssp EGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCE
T ss_pred ECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCE
Confidence 7778999999975 555555531 2235688999999999888887776 9999995 3443
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=2.6e-13 Score=129.32 Aligned_cols=230 Identities=9% Similarity=0.049 Sum_probs=161.9
Q ss_pred CeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC--CcceEe
Q 015490 126 DGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWP--SLEIIL 203 (406)
Q Consensus 126 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~--~~~~~~ 203 (406)
..++++..+...|+.+|..+++.+. .+.....+..+.|+|||+++++++.|+.|.+||+. +++.+.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~------------~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKT------------VLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEE------------EEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEE------------EEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence 3455554444466667776544333 33344456789999999999999999999999995 777776
Q ss_pred eeeccCCceeEEEEc----cCCCEEEEEeC-CCCEEEEEcCCCeeeeecccC----------CcceEEEEEEEcCCCCce
Q 015490 204 NESEAHASVKDLSFS----PDGKFLVSLGN-RGPGRVWDLASSAVATPLAKE----------NDELFASCRFSPLNNEDY 268 (406)
Q Consensus 204 ~~~~~~~~i~~~~~s----~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 268 (406)
.+.... ....++|+ |||+++++++. ++++.++|..+.+.+..+... ....+..+..++++..
T Consensus 235 ~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~-- 311 (567)
T 1qks_A 235 EIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE-- 311 (567)
T ss_dssp EEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE--
T ss_pred EEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE--
Confidence 665433 46799999 69999888775 589999999999888766432 1224667888888764
Q ss_pred EEEEEEEcCCCcEEEEEeCCCceEEEEee-ecCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCceEEEEeec----cc
Q 015490 269 VLYIAAITDRGASIVTWNTTTWKRIRTKQ-VVREPVSSFNVSADGKLLAVGTA-SGDISIIDSSSLQVRTAVKK----AH 342 (406)
Q Consensus 269 ~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~----~~ 342 (406)
+++.....+.|.++|....+.+.... ........+.|+|+|+++++++. ++.|.++|+.+++.+..+.. .|
T Consensus 312 ---~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 312 ---FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 388 (567)
T ss_dssp ---EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBC
T ss_pred ---EEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCC
Confidence 33444778999999987754332222 22345678999999999887764 78899999999998777653 23
Q ss_pred ccceEEEEEcCCC-CeEEEEE-CCCcEEEEEecC
Q 015490 343 LGIVTALAFSYDS-RALVSAS-MDSSVRVTVIED 374 (406)
Q Consensus 343 ~~~v~~~~~sp~~-~~l~s~s-~dg~i~iw~~~~ 374 (406)
.+.-..+ ++|++ ..+++.. .+++|.++|..+
T Consensus 389 pg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 389 PGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred Cccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 3222222 57874 4445553 468999999987
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.65 E-value=5.9e-13 Score=116.95 Aligned_cols=240 Identities=9% Similarity=0.006 Sum_probs=163.1
Q ss_pred cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCe
Q 015490 111 TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGN 190 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 190 (406)
.+...+.++++.++|..+++.. ....|+.++.. +. ...+.. ......+.+++++++|.++++...++.
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~-~~~~v~~~d~~-~~-~~~~~~---------~~~~~~~~~i~~~~~g~l~v~~~~~~~ 79 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQH-KANMISCINLD-GK-ITEYPL---------PTPDAKVMCLTISSDGEVWFTENAANK 79 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEET-TTTEEEEECTT-CC-EEEEEC---------SSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred CcCCCccceEECCCCCEEEEec-CCCcEEEEcCC-CC-eEEecC---------CcccCceeeEEECCCCCEEEeCCCCCe
Confidence 4456789999999998666554 22255556654 22 111111 012356889999999998888777889
Q ss_pred EEEEeCCCcceE-eeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceE
Q 015490 191 LRVFKWPSLEII-LNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 191 i~vwd~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
|..||.. ++.. .........+.++++.++++.+++...++.|.+||. +++............+..+++.+++.
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~---- 153 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA---- 153 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC----
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC----
Confidence 9999976 3332 122223347899999999988777777889999998 55443322222334577899999886
Q ss_pred EEEEEEcCCCcEEEEEeCCCceEEEE-eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEE
Q 015490 270 LYIAAITDRGASIVTWNTTTWKRIRT-KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
+.++...++.|..||. +++.... .......+.+++++++|++.++...++.|.+||. +++........+...+.+
T Consensus 154 --l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 229 (299)
T 2z2n_A 154 --LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHA 229 (299)
T ss_dssp --EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred --EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCcee
Confidence 2233455688999999 6554432 2223456889999999997776666889999999 665443222234567899
Q ss_pred EEEcCCCCeEEEEECCCcEEEEEe
Q 015490 349 LAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 349 ~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
++++++|+.+++...++.|..||.
T Consensus 230 i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 230 ITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEECSTTCEEEEETTTTEEEEEET
T ss_pred EEECCCCCEEEeccCCceEEEECC
Confidence 999999997776657788999997
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.65 E-value=5.5e-12 Score=110.70 Aligned_cols=241 Identities=7% Similarity=-0.025 Sum_probs=159.4
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeE
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNL 191 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 191 (406)
+...+.++++.++|..+++.. ....|+.++.. +. ...+.. -.....+.++++.++|+++++...++.|
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~~-g~-~~~~~~---------~~~~~~~~~i~~~~~g~l~v~~~~~~~i 122 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTEN-AANKIGRITKK-GI-IKEYTL---------PNPDSAPYGITEGPNGDIWFTEMNGNRI 122 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEET-TTTEEEEECTT-SC-EEEEEC---------SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred ccCceeeEEECCCCCEEEeCC-CCCeEEEECCC-Cc-EEEEeC---------CCcCCCceeeEECCCCCEEEEecCCceE
Confidence 457789999999998666554 22356666653 11 111111 0123568899999999888887778899
Q ss_pred EEEeCCCcceEeee-eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEE
Q 015490 192 RVFKWPSLEIILNE-SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVL 270 (406)
Q Consensus 192 ~vwd~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (406)
.+||. +++..... ......+.++++.++++..++...++.|..||. +++............+..+++.+++.
T Consensus 123 ~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~----- 195 (299)
T 2z2n_A 123 GRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA----- 195 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-----
T ss_pred EEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-----
Confidence 99998 55443222 223347899999999987777767789999999 66554321122234467899999876
Q ss_pred EEEEEcCCCcEEEEEeCCCceEEEE-eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEE
Q 015490 271 YIAAITDRGASIVTWNTTTWKRIRT-KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTAL 349 (406)
Q Consensus 271 ~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 349 (406)
+.++...++.|..||. +++.... ...+...+.+++++++|+++++...++.|..||. +++........+...+.++
T Consensus 196 -l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i 272 (299)
T 2z2n_A 196 -LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGI 272 (299)
T ss_dssp -EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEE
T ss_pred -EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceE
Confidence 2233345788999999 6554322 2223467899999999986666556789999998 4543322112345678999
Q ss_pred EEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 350 AFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 350 ~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
++ ++|+++++.+ .+.+..++.++++
T Consensus 273 ~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 273 CF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred Ee-cCCCEEEEec-CCcEEEEEcCccc
Confidence 99 8888776654 6678888887653
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=1.3e-13 Score=125.80 Aligned_cols=289 Identities=9% Similarity=-0.050 Sum_probs=183.7
Q ss_pred CCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---------CCe
Q 015490 66 IRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---------NSC 136 (406)
Q Consensus 66 ~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---------~~~ 136 (406)
+++.+.++++..+.... .-.+..+|..+. +.+.++.....+ .++++|||++++++.. +.-
T Consensus 81 ~~~~~~vyV~n~~~~~~-----~~~VsVID~~t~----~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~ 149 (426)
T 3c75_H 81 APDARRVYIQDPAHFAA-----ITQQFVIDGSTG----RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTD 149 (426)
T ss_dssp CCCTTEEEEEECTTTCS-----SEEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEECCCcCCC-----CCeEEEEECCCC----EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCC
Confidence 45556677765432110 036777777663 345556544444 8999999999888752 234
Q ss_pred EEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcceEeeeeccCCceeE
Q 015490 137 RLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE--NGNLRVFKWPSLEIILNESEAHASVKD 214 (406)
Q Consensus 137 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~~ 214 (406)
.|..+|..+.+....+.+.. .+. +........+.|+|||++++++.. ++.|.+.|+.+++.+..+.-...
T Consensus 150 ~VsviD~~t~~vv~~I~v~g-~~r---~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---- 221 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPD-APR---FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---- 221 (426)
T ss_dssp EEEEECTTTCCEEEEEEETT-CCC---CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----
T ss_pred EEEEEECCCCcEEEEEECCC-ccc---cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----
Confidence 67778887766655544310 000 000122346799999999998864 57899999999998877654321
Q ss_pred EEEccCC-CEEEEEeCCCCEEEEEcCCCeeee----ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC
Q 015490 215 LSFSPDG-KFLVSLGNRGPGRVWDLASSAVAT----PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT 289 (406)
Q Consensus 215 ~~~s~~~-~~l~s~s~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~ 289 (406)
....|++ +.+++.+.||.+.+.+..+++... .+..........+.|.+++.. ++ .. ...+.+.+.|...
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~---~~--~~-s~~g~V~ViD~~~ 295 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR---LV--WP-TYTGKIFQADLTA 295 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE---EE--EE-BTTSEEEEEEECS
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE---EE--EE-eCCCcEEEEeccC
Confidence 2333433 455666677777777775554432 122222222223567888775 22 22 2357899999865
Q ss_pred ceEE--EEeee----------cCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEECCCceEEEEeecccccceE
Q 015490 290 WKRI--RTKQV----------VREPVSSFNVSADGKLLAVGTA----------SGDISIIDSSSLQVRTAVKKAHLGIVT 347 (406)
Q Consensus 290 ~~~~--~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~v~ 347 (406)
.... ..+.. .......++++|+++.+++... ++.|.++|+.+.+.+..+.- .....
T Consensus 296 ~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~ 373 (426)
T 3c75_H 296 EGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEID 373 (426)
T ss_dssp SCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEEC
T ss_pred CceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcC
Confidence 4422 11110 0011223789999998877643 35799999999999999862 33578
Q ss_pred EEEEcCCCC-eEEEEE-CCCcEEEEEecCCcCCCCc
Q 015490 348 ALAFSYDSR-ALVSAS-MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 348 ~~~~sp~~~-~l~s~s-~dg~i~iw~~~~~~~~~~~ 381 (406)
++.|+|||+ ++++.. .++.|.++|+.+.+.+..+
T Consensus 374 gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 374 SINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999999999 888887 5899999999999877654
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=5.1e-13 Score=118.40 Aligned_cols=247 Identities=10% Similarity=0.077 Sum_probs=160.3
Q ss_pred EecCCCCceEEEEccCCCeEEE-------Ee-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC-C
Q 015490 109 LRTDSDLPYRMAIHPHGDGIIC-------AL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE-G 179 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~-------~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g 179 (406)
+...-..+.+++|++++..+++ .. ++ .|+.|+..+++.. .+..+ ........+.+++++++ |
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--~i~~~d~~~g~~~-~~~~~------~~~~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAG--EILRIDLKTGKKT-VICKP------EVNGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECC--EEEEECTTTCCEE-EEECC------EETTEECCEEEEEECSSSS
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCC--EEEEEeCCCCcEE-EEEec------ccCCCCCCCceEEEecCCC
Confidence 3444556789999999987776 33 44 5666665443321 11000 00012256889999999 7
Q ss_pred CEEEEeeCCCeEEEEeCCCcceEee-eecc----CCceeEEEEccCCCEEEEEeCC---------------CCEEEEEcC
Q 015490 180 TIFAAGSENGNLRVFKWPSLEIILN-ESEA----HASVKDLSFSPDGKFLVSLGNR---------------GPGRVWDLA 239 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~----~~~i~~~~~s~~~~~l~s~s~d---------------~~i~iwd~~ 239 (406)
+++++.. .+.|.+||.+ ++.... .... ...+.+++++++|++.++...+ +.|..||..
T Consensus 84 ~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 84 QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 6555543 4479999987 665432 2111 1258899999999877776554 467777765
Q ss_pred CCeeeeecccCCcceEEEEEEE----cCCCCceEEEEEEEcCCCcEEEEEeCC-CceE-----EEEeeecC-CCeEEEEE
Q 015490 240 SSAVATPLAKENDELFASCRFS----PLNNEDYVLYIAAITDRGASIVTWNTT-TWKR-----IRTKQVVR-EPVSSFNV 308 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~-----~~~~~~~~-~~i~~~~~ 308 (406)
++...... .......++|+ ++++. +.++...++.|.+||.. +++. ...+..+. ..+..+++
T Consensus 162 -g~~~~~~~--~~~~~~~i~~~~~~d~dg~~-----l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 162 -GQMIQVDT--AFQFPNGIAVRHMNDGRPYQ-----LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp -SCEEEEEE--EESSEEEEEEEECTTSCEEE-----EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred -CCEEEecc--CCCCcceEEEecccCCCCCE-----EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 44333221 11235678999 88763 33444567899999976 3432 22222222 45788999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEE-EEECCCcEEEEEecCC
Q 015490 309 SADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALV-SASMDSSVRVTVIEDK 375 (406)
Q Consensus 309 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~s~dg~i~iw~~~~~ 375 (406)
+++|+++++...++.|.+||..+++....+. .+...+.+++|+|+++.|. +...++.|..|++...
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999988887778899999998777666664 4557789999999999554 4455688999998753
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=4.4e-14 Score=122.75 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=151.3
Q ss_pred CCCEEEEeeCCCeEEEEeCCCcceEeeeeccC-CceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEE
Q 015490 178 EGTIFAAGSENGNLRVFKWPSLEIILNESEAH-ASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFA 256 (406)
Q Consensus 178 ~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (406)
.+++|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+....+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 45789999999999999999999998887765 3789999999999888 45778999999 88888888765445677
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC------CCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR------EPVSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
++.+.++++. +++....++.|..+|. +++.+..+.... .....+++.++|+++++...++.|..||..
T Consensus 81 ~~~~~~dG~~-----lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 81 TARILPDGNA-----LVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEECTTSCE-----EEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccEECCCCCE-----EEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 8899999983 3333333778888886 667776665321 134456788999999999999999999998
Q ss_pred CceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 331 SLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 331 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
++.+.++. . ...+.++...++|+.+++++.+++|..+|..+++.+-+
T Consensus 155 -G~~~w~~~-~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 155 -GQLLNSVK-L-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp -SCEEEEEE-C-SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEE
T ss_pred -CCEEEEEE-C-CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEE
Confidence 99988885 2 34566788899999999888888899999888876433
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=5.6e-14 Score=138.65 Aligned_cols=238 Identities=11% Similarity=0.014 Sum_probs=153.6
Q ss_pred ccCCCeEEEEe-cC---CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEE-----EeeCCCeEE
Q 015490 122 HPHGDGIICAL-QN---SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA-----AGSENGNLR 192 (406)
Q Consensus 122 sp~~~~l~~~~-~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-----~~~~dg~i~ 192 (406)
+|+|++++... ++ ...||..+...+.....+..+ . ..-.+...+..++|||||++|| .|+.+.+|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~----~-~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPN----G-WSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGG----G-SSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchH----H-hccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEE
Confidence 47899888765 22 467888876443321111110 0 0001223588999999999999 445567899
Q ss_pred EEeCCCcceE-eeeeccCCceeEEEEccCCCEEEEEeCCCC-------------EEEEEcCCCeee--eeccc-CCcceE
Q 015490 193 VFKWPSLEII-LNESEAHASVKDLSFSPDGKFLVSLGNRGP-------------GRVWDLASSAVA--TPLAK-ENDELF 255 (406)
Q Consensus 193 vwd~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~-------------i~iwd~~~~~~~--~~~~~-~~~~~~ 255 (406)
+||+.+++.+ .... .......++|+|||+.|++++.|.. |++|++.++... ..+.. .+...+
T Consensus 151 v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp EEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred EEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 9999998764 2111 1112268999999999999988776 999999887632 22222 222457
Q ss_pred EEEEEEcCCCCceEEEEEEEcC-CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC----CCcEEEEECC
Q 015490 256 ASCRFSPLNNEDYVLYIAAITD-RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA----SGDISIIDSS 330 (406)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----dg~i~i~d~~ 330 (406)
..+.|+|+++. +++..... ....|+++|..+++. ..+..+...+....+ ++|+ ++..+. ++.|.+||+.
T Consensus 230 ~~~~~SpDG~~---l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 230 LQSDLSRDGKY---LFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp EEEEECTTSCC---EEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred EEEEECCCCCE---EEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 78999999986 22222222 345788888766543 344445455566666 5666 554443 5789999998
Q ss_pred CceE---EEEeeccc-ccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 331 SLQV---RTAVKKAH-LGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 331 ~~~~---~~~~~~~~-~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
++.. ...+. .+ ...+..++|+ ++.++++...|+..++|.+.
T Consensus 304 ~~~~~~~~~l~~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 304 KPARASWKEIVP-EDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp BCSGGGCEEEEC-CCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCCccCCeEEec-CCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 7652 23332 23 4567888998 67788889999999988776
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=8.9e-14 Score=122.37 Aligned_cols=200 Identities=8% Similarity=-0.013 Sum_probs=143.8
Q ss_pred cCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeee
Q 015490 167 VGQQLALTFDSEGT-IFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVAT 245 (406)
Q Consensus 167 ~~~v~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~ 245 (406)
.....+++|+|+|+ +++++..++.|..|+..++ ...+..+...+.+++++++|+++++...++.|.+||..+++...
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 35577899999998 7888888999999998877 44555555678999999999987777777899999998877544
Q ss_pred ecccCC---cceEEEEEEEcCCCCceEEEEEEE--cC-------------CCcEEEEEeCCCceEEEEeeecCCCeEEEE
Q 015490 246 PLAKEN---DELFASCRFSPLNNEDYVLYIAAI--TD-------------RGASIVTWNTTTWKRIRTKQVVREPVSSFN 307 (406)
Q Consensus 246 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~--~~-------------~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~ 307 (406)
...... ...+..++++|+++ ++++.. +. ..+.|+.++.. ++. ..+..+......++
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~----l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGS----LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLA 178 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSC----EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEE
T ss_pred EeeccCCCCCCCCCCEEECCCCC----EEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEE
Confidence 322111 12345789999987 222211 11 24578888776 443 33444456678999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECC-CceE---EEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 308 VSADGKLLAVGTASGDISIIDSS-SLQV---RTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 308 ~sp~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
|+|+|+.+++.+.++.|++|++. +++. ...+ ..+...+.+++++++|+++++. ++.|.+|+.. ++.+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 99999998777778999999986 4544 3333 3455667889999999877665 7889999975 4443
No 200
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.61 E-value=3e-12 Score=115.55 Aligned_cols=291 Identities=16% Similarity=0.154 Sum_probs=176.7
Q ss_pred CCCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEe-cC-CCCceEEEE-----------c--cCCCeEEE
Q 015490 66 IRRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELR-TD-SDLPYRMAI-----------H--PHGDGIIC 130 (406)
Q Consensus 66 ~~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~h-~~~v~~~~~-----------s--p~~~~l~~ 130 (406)
.+.+.++++....-.....-+..+.+..+++++.... +.+.++. .+ .+....+.| + +++++|++
T Consensus 22 ~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~-~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v 100 (462)
T 2ece_A 22 APPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYS-KIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIV 100 (462)
T ss_dssp SCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTT-SEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEE
T ss_pred CCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcc-eEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEE
Confidence 4566777665433212222456777777777665442 2333222 11 123334444 7 88999999
Q ss_pred EecCCeEEEEEecccc-cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC------CeEEEEeCCCcceEe
Q 015490 131 ALQNSCRLFEWDEVEN-TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN------GNLRVFKWPSLEIIL 203 (406)
Q Consensus 131 ~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~vwd~~~~~~~~ 203 (406)
.+-++-+|+.+|..+. ...+....- ....+..-.+......+..+|+| +++++..+ |.|.++|..+++.+.
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~i-e~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVI-EPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEE-CHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEE
T ss_pred ccCCCCeEEEEECCCCCCCceeeeee-chhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEE
Confidence 8844446666665432 111110000 00000000011245677889999 66666554 789999999999888
Q ss_pred eeeccCC---ceeEEEEccCCCEEEEEe-------------------CCCCEEEEEcCCCeeeeecccC-CcceEEEEEE
Q 015490 204 NESEAHA---SVKDLSFSPDGKFLVSLG-------------------NRGPGRVWDLASSAVATPLAKE-NDELFASCRF 260 (406)
Q Consensus 204 ~~~~~~~---~i~~~~~s~~~~~l~s~s-------------------~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~ 260 (406)
.+..... .-.++.|+|+++.+++.. .+.+|.+||+.+++...++... .+.....+.|
T Consensus 179 ~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f 258 (462)
T 2ece_A 179 KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRP 258 (462)
T ss_dssp ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEE
T ss_pred EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEe
Confidence 8764322 245688999999888774 3679999999999888877654 2334445656
Q ss_pred --EcCCCCceEEEEEEE---cCCCcEEEEEeCCCce--EEEEeeec------------------CCCeEEEEEcCCCCEE
Q 015490 261 --SPLNNEDYVLYIAAI---TDRGASIVTWNTTTWK--RIRTKQVV------------------REPVSSFNVSADGKLL 315 (406)
Q Consensus 261 --~~~~~~~~~l~~~~~---~~~~~~i~~~d~~~~~--~~~~~~~~------------------~~~i~~~~~sp~~~~l 315 (406)
+|+++. +|++.. ...++.|.+|....++ ....+... ......+.+||||++|
T Consensus 259 ~~~Pdg~~---aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfL 335 (462)
T 2ece_A 259 LHDPTKLM---GFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFL 335 (462)
T ss_dssp CSSTTCCE---EEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEE
T ss_pred eECCCCCE---EEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEE
Confidence 999885 333221 1156777776554332 12211000 2346789999999999
Q ss_pred EEEeC-CCcEEEEECC---CceEEEEeecccc-------------cceEEEEEcCCCCeEEEEE
Q 015490 316 AVGTA-SGDISIIDSS---SLQVRTAVKKAHL-------------GIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 316 ~~~~~-dg~i~i~d~~---~~~~~~~~~~~~~-------------~~v~~~~~sp~~~~l~s~s 362 (406)
+++.. .+.|.+||+. +.+.+..+..+-. +....++++|||++|+++.
T Consensus 336 YVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 336 YLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99887 6889999985 3455555543210 1357899999999999887
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.7e-12 Score=119.35 Aligned_cols=237 Identities=8% Similarity=-0.006 Sum_probs=158.1
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCC--eE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENG--NL 191 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg--~i 191 (406)
..+..|+|+++++.+++.. ...+|+.++..++..... ........ ++|+++++.|+++..++ .|
T Consensus 131 ~~P~~la~d~~g~lyv~d~-~~~~I~~id~~~g~~~~~------------~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQR-DDPRVRLISVDDNKVTTV------------HPGFKGGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CCEEEEEECSTTEEEEEET-TTTEEEEEETTTTEEEEE------------EETCCBCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred CCceEEEEeCCCCEEEEec-CCCcEEEEECCCCEEEEe------------eccCCCCc-eeEecCCCcEEEEecCCCceE
Confidence 4678999999988444443 333666676643322111 11122223 89999999888887765 78
Q ss_pred EEEeCCCcceEeee---ec-cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeee----cccCCcce-EEEEEEEc
Q 015490 192 RVFKWPSLEIILNE---SE-AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATP----LAKENDEL-FASCRFSP 262 (406)
Q Consensus 192 ~vwd~~~~~~~~~~---~~-~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~----~~~~~~~~-~~~~~~~~ 262 (406)
.+++...+.....+ .. ....+.+++++|++..|+++..++.|+.||..++..... ........ ...++|+|
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeC
Confidence 89987655443232 12 334678999999655666677788899999987654322 11111111 12899999
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC---------------CCeEEEEEcCCCCEEEEEe-CCCcEEE
Q 015490 263 LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR---------------EPVSSFNVSADGKLLAVGT-ASGDISI 326 (406)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------~~i~~~~~sp~~~~l~~~~-~dg~i~i 326 (406)
++.. +.++...++.|+.|+.... +..+.++. .....++++|+|+++++-. .++.|+.
T Consensus 277 ~~g~-----lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 277 VDSN-----FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTE-----EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCE-----EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 7653 3345567889999998754 33333321 3478999999999777777 7889999
Q ss_pred EECCCceEEEEeeccc---------------ccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 327 IDSSSLQVRTAVKKAH---------------LGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 327 ~d~~~~~~~~~~~~~~---------------~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
|++.++...... ++ -.....++++++|.++++-..+++|+.++++
T Consensus 350 ~~~~~G~v~~~~--g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 350 LDILDGYVSTVA--GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EETTTTEEEEEE--ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EECCCCEEEEEe--CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 998777654333 22 2357899999999888888888899988764
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=2.5e-12 Score=113.16 Aligned_cols=228 Identities=11% Similarity=0.145 Sum_probs=151.3
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeE
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNL 191 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 191 (406)
+.....+..|+|++..|+.+.....+|+.++..++.. ..+.....+.+++++++|+++++ . ++.|
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-------------~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l 75 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-------------QRVTMDAPVSSVALRQSGGYVAT-I-GTKF 75 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-------------EEEECSSCEEEEEEBTTSSEEEE-E-TTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-------------EEEeCCCceEEEEECCCCCEEEE-E-CCeE
Confidence 3445568899998777776664444777777654321 11223467899999999995554 4 5689
Q ss_pred EEEeCCCcceEeeeecc----CCceeEEEEccCCCEEEEEeCC---------CCEEEEEcCC-CeeeeecccCCcceEEE
Q 015490 192 RVFKWPSLEIILNESEA----HASVKDLSFSPDGKFLVSLGNR---------GPGRVWDLAS-SAVATPLAKENDELFAS 257 (406)
Q Consensus 192 ~vwd~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~s~s~d---------~~i~iwd~~~-~~~~~~~~~~~~~~~~~ 257 (406)
.+||.++++........ ...+++++++|+|++.++...+ ..-.+|.+.. ++... +.. .......
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~-~~~~png 153 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFD-QVDISNG 153 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEE-EESBEEE
T ss_pred EEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Eee-ccccccc
Confidence 99999877654322211 1257899999999966654322 2345555543 33222 211 1223568
Q ss_pred EEEEcCCCCceEEEEEEEcCCCcEEEEEeC--CCceEE-----EEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 258 CRFSPLNNEDYVLYIAAITDRGASIVTWNT--TTWKRI-----RTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~--~~~~~~-----~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
++|+|+++. +.++...++.|..||+ .++... ..+.........++++++|++.++....+.|.+||..
T Consensus 154 i~~spdg~~-----lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 154 LDWSLDHKI-----FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEECTTSCE-----EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred eEEcCCCCE-----EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 999999985 3344456789999986 454431 2222223567899999999888777778889999999
Q ss_pred CceEEEEeecccccceEEEEEc-CCCCeEEEEE
Q 015490 331 SLQVRTAVKKAHLGIVTALAFS-YDSRALVSAS 362 (406)
Q Consensus 331 ~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~s~s 362 (406)
+++.+..+. .+...+++++|. |+++.|..++
T Consensus 229 tG~~~~~i~-~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 229 TGKRLQTVK-LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TCCEEEEEE-CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CceEEEEEE-CCCCCceEEEEeCCCCCEEEEEc
Confidence 899888885 566779999998 8887765544
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=2.2e-12 Score=115.25 Aligned_cols=198 Identities=10% Similarity=0.025 Sum_probs=144.2
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
....+.+. +++++++...++.|.+||..+++.+..+.. ......++++++++..++...++.|.+||..+++....+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 45667774 445666666689999999999998877743 3468899999998544444378999999999998876665
Q ss_pred cCCc----ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCC---
Q 015490 249 KEND----ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTAS--- 321 (406)
Q Consensus 249 ~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--- 321 (406)
.... .....+++ ++.. +|+. ..+.++.|.++|+.+++.+..+... .....+.++|+|++++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~--~~~~---lyv~-~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ--YGKY---VYVN-CWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp CTTCCTTTCBCCCEEE--ETTE---EEEE-ECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTT
T ss_pred cCCccccCCCcceEEE--ECCE---EEEE-cCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccC
Confidence 4321 02345666 3332 3322 2224789999999999988877654 345789999999877766554
Q ss_pred -------CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 322 -------GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 322 -------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
+.|.++|..+++....+.......+..++|+|+++.|.++.. .|.+||+.+++.
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 789999999998877764222346889999999998887654 899999988775
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=1.1e-12 Score=130.48 Aligned_cols=240 Identities=11% Similarity=0.054 Sum_probs=153.4
Q ss_pred ccCCCeEEEEe-cC---CeEEEEEecc---cccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC-----C
Q 015490 122 HPHGDGIICAL-QN---SCRLFEWDEV---ENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN-----G 189 (406)
Q Consensus 122 sp~~~~l~~~~-~~---~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----g 189 (406)
+|+|++++... ++ ...||..+.. .+.....++.+ .+ ...+...+..++|||||++||.+..+ .
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~----~l-~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPN----TW-AKDGATALDAWAASDDGRLLAYSVQDGGSDWR 189 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGG----GC-C----EEEEEEEECTTSSEEEEEEEETTCSEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHH----Hh-ccCCCEEEEeEEECCCCCEEEEEEcCCCCceE
Confidence 48999988765 22 3678888764 22221111110 00 00112357889999999999887553 4
Q ss_pred eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCC--------------EEEEEcCCCee--eeecccC-Cc
Q 015490 190 NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP--------------GRVWDLASSAV--ATPLAKE-ND 252 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~--------------i~iwd~~~~~~--~~~~~~~-~~ 252 (406)
.|++||+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++.. ...+... +.
T Consensus 190 ~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~ 267 (741)
T 1yr2_A 190 TVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP 267 (741)
T ss_dssp EEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC
Confidence 6999999999875432 12223468999999 99998887654 88999977652 1222221 12
Q ss_pred ceEEEEEEEcCCCCceEEEEEEEcC--CCcEEEEEeCCCc--eEEEEeeecCCCeEEEEEcCCCCEEEEEeCC----CcE
Q 015490 253 ELFASCRFSPLNNEDYVLYIAAITD--RGASIVTWNTTTW--KRIRTKQVVREPVSSFNVSADGKLLAVGTAS----GDI 324 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~i~~~d~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d----g~i 324 (406)
..+..+.|+|+++. +++..... ....|++||+.++ +....+..+....... ++|+|+.|+..+.+ +.|
T Consensus 268 ~~~~~~~~SpDG~~---l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 268 KRGHGASVSSDGRW---VVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp TCEEEEEECTTSCE---EEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred eEEEEEEECCCCCE---EEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 24678999999985 22222222 3568999999876 3144555454444444 34899988887763 459
Q ss_pred EEEECCCc-eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 325 SIIDSSSL-QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 325 ~i~d~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
.+||+.++ .....+...+...+..+.|+ ++.++++...|+..+||.+.
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 99999874 23333333455567778887 56778888899988888775
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.56 E-value=5.1e-13 Score=131.61 Aligned_cols=245 Identities=13% Similarity=0.083 Sum_probs=158.6
Q ss_pred cCCCCceEEEEccCCCeEEEEe--cCC--eEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL--QNS--CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS 186 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~--~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 186 (406)
+|...+..++|||||++|+.+. .+. ..||.++..+++.... .+. ......++|+ ||+.|+.++
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----------~~~-~~k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-----------PLK-DVKFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------EEE-EEESCCCEEE-TTTEEEEEE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------ccC-CceeccEEEe-CCCEEEEEE
Confidence 3556788999999999998764 232 6788888776543221 000 0112467899 999999888
Q ss_pred CCC-------------eEEEEeCCCcce----Eeeeec-cCCceeEEEEccCCCEEEEEeC----CCCEEEEEcCCCe-e
Q 015490 187 ENG-------------NLRVFKWPSLEI----ILNESE-AHASVKDLSFSPDGKFLVSLGN----RGPGRVWDLASSA-V 243 (406)
Q Consensus 187 ~dg-------------~i~vwd~~~~~~----~~~~~~-~~~~i~~~~~s~~~~~l~s~s~----d~~i~iwd~~~~~-~ 243 (406)
.+. .|++|++.++.. +..... +...+..+.|+|||++|+.... ...|+++|+.++. .
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~ 272 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP 272 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence 774 399999977642 222222 3335778999999998765432 3479999997763 2
Q ss_pred eeecccCCcceEEEEEEEcCCCCceEEEEEEEc-CCCcEEEEEeCCCceE--EEEeeecCCCeEEEEEcCCCCEEEEEeC
Q 015490 244 ATPLAKENDELFASCRFSPLNNEDYVLYIAAIT-DRGASIVTWNTTTWKR--IRTKQVVREPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~d~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 320 (406)
...+..+... .... +++++.. +++.... ...+.|..+|+.++.. ...+..+...+. .|++++++|+....
T Consensus 273 ~~~l~~~~~~-~~~~-~~~~g~~---l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 273 LLTVQGDLDA-DVSL-VDNKGST---LYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp CEEEECSSSS-CEEE-EEEETTE---EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred eEEEeCCCCc-eEEE-EeccCCE---EEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 3334333332 2223 6777775 3222221 2257899999987653 344555555554 89999998887765
Q ss_pred CC---cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC----CcEEEEEecCCc
Q 015490 321 SG---DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD----SSVRVTVIEDKK 376 (406)
Q Consensus 321 dg---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d----g~i~iw~~~~~~ 376 (406)
++ .|++||+..+. ...+...+.+.+..+.+++++..|+....+ ++|+.||+.+++
T Consensus 346 ~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 346 VDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 43 68999987544 344432355667788888888877655444 789999987664
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.56 E-value=7.4e-11 Score=103.46 Aligned_cols=239 Identities=7% Similarity=-0.027 Sum_probs=155.9
Q ss_pred cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCe
Q 015490 111 TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGN 190 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 190 (406)
.+...+.++++.+++...++.. +...|+.++.. ++. ..+.. ......+.++++.++|+++++...++.
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~-~~~~v~~~d~~-g~~-~~~~~---------~~~~~~~~~i~~~~~g~l~v~~~~~~~ 126 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTEN-GANKIGKLSKK-GGF-TEYPL---------PQPDSGPYGITEGLNGDIWFTQLNGDR 126 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEET-TTTEEEEECTT-SCE-EEEEC---------SSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred CCCCcceeEEECCCCCEEEEec-CCCeEEEECCC-CCe-EEecC---------CCCCCCCccceECCCCCEEEEccCCCe
Confidence 3446789999999998666543 23356666654 221 11111 012256889999999998887776889
Q ss_pred EEEEeCCCcceEee-eeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceE
Q 015490 191 LRVFKWPSLEIILN-ESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 191 i~vwd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
|..+|.. ++.... .......+.++++.++++..++...++.|..+|. +++............+..+++.+++.
T Consensus 127 i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~---- 200 (300)
T 2qc5_A 127 IGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA---- 200 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS----
T ss_pred EEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC----
Confidence 9999987 554422 2223347899999999996666666788999998 55544321112234577899998875
Q ss_pred EEEEEEcCCCcEEEEEeCCCceEEEE-eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEE
Q 015490 270 LYIAAITDRGASIVTWNTTTWKRIRT-KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
+.++....+.|..||. +++.... .......+.+++++++|++.++...++.|..||.. ++............+.+
T Consensus 201 --l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 276 (300)
T 2qc5_A 201 --LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHG 276 (300)
T ss_dssp --EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCC
T ss_pred --EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccce
Confidence 2333345678999998 4443332 22234568999999999866666567899999984 44332211123456889
Q ss_pred EEEcCCCCeEEEEECCCcEEEEEec
Q 015490 349 LAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 349 ~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
++++++|+++++.. . .|..++.+
T Consensus 277 i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 277 ITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEECTTSCEEEECS-S-EEEEEEEC
T ss_pred eEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 99999998666544 4 67666653
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=2.3e-11 Score=106.71 Aligned_cols=239 Identities=11% Similarity=0.025 Sum_probs=159.9
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeE
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNL 191 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 191 (406)
....+.++++.++|...++.. ....|..++.. ++ ...+.. -.....+.++++.++|+++++...++.|
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~-~~~~v~~~~~~-~~-~~~~~~---------~~~~~~~~~i~~~~~g~l~v~~~~~~~v 85 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQH-KANKISSLDQS-GR-IKEFEV---------PTPDAKVMCLIVSSLGDIWFTENGANKI 85 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEET-TTTEEEEECTT-SC-EEEEEC---------SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCcceeeECCCCCEEEEcC-CCCeEEEECCC-Cc-eEEEEC---------CCCCCcceeEEECCCCCEEEEecCCCeE
Confidence 345778999999998666553 22245556554 22 111111 0123568899999999988777667899
Q ss_pred EEEeCCCcceEee-eeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEE
Q 015490 192 RVFKWPSLEIILN-ESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVL 270 (406)
Q Consensus 192 ~vwd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (406)
..||.. ++.... .......+.++++.+++++.++...++.|..+|.. ++............+..+++.++++
T Consensus 86 ~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~----- 158 (300)
T 2qc5_A 86 GKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA----- 158 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-----
T ss_pred EEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-----
Confidence 999987 554322 22223478999999999877777668889999987 5544221122234577899999886
Q ss_pred EEEEEcCCCcEEEEEeCCCceEEEE-eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEE
Q 015490 271 YIAAITDRGASIVTWNTTTWKRIRT-KQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTAL 349 (406)
Q Consensus 271 ~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 349 (406)
+.++...++.|..+|. +++.... .......+..++++++|++.++....+.|.+||. +++........+...+.++
T Consensus 159 -l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 235 (300)
T 2qc5_A 159 -LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAI 235 (300)
T ss_dssp -EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred -EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEE
Confidence 2233345678999998 4444331 1123356889999999987776666778999998 4544433222345668899
Q ss_pred EEcCCCCeEEEEECCCcEEEEEe
Q 015490 350 AFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 350 ~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
+++++|+++++...++.|..|+.
T Consensus 236 ~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 236 TAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EECSTTCEEEEETTTTEEEEECT
T ss_pred EECCCCCEEEeccCCCeEEEECC
Confidence 99999987776666788999987
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.54 E-value=2.4e-11 Score=108.30 Aligned_cols=223 Identities=14% Similarity=0.034 Sum_probs=144.5
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVF 194 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vw 194 (406)
...+..|+|++..++........|+.++..+++. . .+.....+.+++|+++|+++++. .+ .|.+|
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~------------~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~ 114 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-T------------VHALPFMGSALAKISDSKQLIAS-DD-GLFLR 114 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-E------------EEECSSCEEEEEEEETTEEEEEE-TT-EEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-E------------EEECCCcceEEEEeCCCeEEEEE-CC-CEEEE
Confidence 3467899998776666552233677777654321 1 11223568899999999877654 44 59999
Q ss_pred eCCCcceEeeeec---c-CCceeEEEEccCCCEEEEEeC------CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCC
Q 015490 195 KWPSLEIILNESE---A-HASVKDLSFSPDGKFLVSLGN------RGPGRVWDLASSAVATPLAKENDELFASCRFSPLN 264 (406)
Q Consensus 195 d~~~~~~~~~~~~---~-~~~i~~~~~s~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (406)
|..+++....... . ...+.+++++|+|+++++... .+.|..++ +++...... .......++|+|++
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg 190 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDG 190 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTS
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCC
Confidence 9888775432211 1 126889999999997665442 23455555 454332221 11235689999999
Q ss_pred CCceEEEEEEEcCCCcEEEEEeCC--Cc-e-----EEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 265 NEDYVLYIAAITDRGASIVTWNTT--TW-K-----RIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 265 ~~~~~l~~~~~~~~~~~i~~~d~~--~~-~-----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
+. +..+...++.|.+||.. ++ + ....+.........++++++|++.++...++.|.+||. +++.+.
T Consensus 191 ~~-----lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 191 TT-----GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp CE-----EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred CE-----EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 84 33344557899999985 55 2 12222222345678999999987777666788999998 566666
Q ss_pred EeecccccceEEEEEc-CCCCeEEEEEC
Q 015490 337 AVKKAHLGIVTALAFS-YDSRALVSASM 363 (406)
Q Consensus 337 ~~~~~~~~~v~~~~~s-p~~~~l~s~s~ 363 (406)
.+. .+...+.+++|+ ++++.|+.++.
T Consensus 265 ~i~-~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 265 RYE-VPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEE-CSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEE-CCCCCcEEEEEecCCCCEEEEEec
Confidence 664 455679999998 88877755543
No 209
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.53 E-value=2.3e-12 Score=111.54 Aligned_cols=199 Identities=9% Similarity=0.024 Sum_probs=137.6
Q ss_pred cEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeec
Q 015490 169 QQLALTFDSEGTIFA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPL 247 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 247 (406)
...+++++++|++++ +...++.|.+|+..+.............+.+++++++++.+++.. ++.|.+||....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 678999999999777 547788999999765543322222334678999999998665555 889999998765433 23
Q ss_pred ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 015490 248 AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISII 327 (406)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~ 327 (406)
.......+..+++++++. + .++...++.|.+|+..+.............+.+++++++|+++++...++.|.+|
T Consensus 103 ~~~~~~~p~~i~~~~~g~----l--~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGA----V--YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CCCSCSSEEEEEECTTCC----E--EEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred ecCCcCCCcceEECCCCC----E--EEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 222224577899999876 2 2333457789999876654433222222456889999999977776668899999
Q ss_pred ECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 328 DSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 328 d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
|........... .+...+.+++++++|.++++...++.|.+|+.....
T Consensus 177 ~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 177 EAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred ecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 988766544332 333668899999999877777778899999986543
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.52 E-value=1.2e-11 Score=109.31 Aligned_cols=236 Identities=14% Similarity=0.099 Sum_probs=150.6
Q ss_pred ceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEE
Q 015490 105 PVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAA 184 (406)
Q Consensus 105 ~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 184 (406)
.+..+..+........|+|+++.|+.+.....+|+.|+.. ++ ...+ ......+..++++++|+++++
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~-----------~~~~~~~~gl~~d~dG~l~v~ 102 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVL-----------LDATAFTNGNAVDAQQRLVHC 102 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEE-----------EESCSCEEEEEECTTSCEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEE-----------eCCCCccceeeECCCCCEEEE
Confidence 4555666667788999999999766665333467777652 22 1111 113356889999999997776
Q ss_pred eeCCCeEEEEeCCCcceEeeeecc----CCceeEEEEccCCCEEEE----EeC-------------CCCEEEEEcCCCee
Q 015490 185 GSENGNLRVFKWPSLEIILNESEA----HASVKDLSFSPDGKFLVS----LGN-------------RGPGRVWDLASSAV 243 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~s----~s~-------------d~~i~iwd~~~~~~ 243 (406)
...++.|.+|+.+ ++........ ...+.+++++++|++.++ +.. .+.|..+|..+++.
T Consensus 103 ~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 103 EHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp ETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred ECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 6566789999975 5432221111 124678999999997775 321 24577777766654
Q ss_pred eeecccCCcceEEEEEEEcCCCCceEEEEEEEcC---CCcEEEEEeCCCceEE--EEe-eecCCCeEEEEEcCCCCEEEE
Q 015490 244 ATPLAKENDELFASCRFSPLNNEDYVLYIAAITD---RGASIVTWNTTTWKRI--RTK-QVVREPVSSFNVSADGKLLAV 317 (406)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~i~~~d~~~~~~~--~~~-~~~~~~i~~~~~sp~~~~l~~ 317 (406)
.... .......++|+|+++. +|+..... ..+.|+.||+...... ..+ .........++++++|++. +
T Consensus 182 ~~~~---~~~~p~gl~~spdg~~---lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v 254 (305)
T 3dr2_A 182 QRMA---DLDHPNGLAFSPDEQT---LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-S 254 (305)
T ss_dssp EEEE---EESSEEEEEECTTSSE---EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-E
T ss_pred EEEe---cCCCCcceEEcCCCCE---EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-E
Confidence 4332 1223567999999984 33332211 1378999998754411 111 1122345678999999944 4
Q ss_pred EeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC
Q 015490 318 GTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS 365 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg 365 (406)
++.++ |.+|+. +++.+..+. .+. .+.+++|+++++.|..++.++
T Consensus 255 ~~~~g-v~~~~~-~g~~~~~~~-~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 255 SSGTG-VCVFDS-DGQLLGHIP-TPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp CCSSE-EEEECT-TSCEEEEEE-CSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ecCCc-EEEECC-CCCEEEEEE-CCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 44444 999998 466666665 333 588999999998888877664
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.48 E-value=7.5e-11 Score=106.85 Aligned_cols=237 Identities=10% Similarity=0.016 Sum_probs=153.3
Q ss_pred EccCCCeEEEEec-CCe---EEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee----------
Q 015490 121 IHPHGDGIICALQ-NSC---RLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS---------- 186 (406)
Q Consensus 121 ~sp~~~~l~~~~~-~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---------- 186 (406)
..|+++++++... +.- .|+.+|..+++.... +.....- .+++||||++++++.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~------------i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~ 94 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH------------VNGGFLP-NPVAAHSGSEFALASTSFSRIAKGK 94 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEE------------ecCCCCC-CeEECCCCCEEEEEeccccccccCC
Confidence 3467776665532 221 566666655443322 2222222 899999999998875
Q ss_pred CCCeEEEEeCCCcceEeeeecc-------CCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeee-cccCCcceEE
Q 015490 187 ENGNLRVFKWPSLEIILNESEA-------HASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATP-LAKENDELFA 256 (406)
Q Consensus 187 ~dg~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~ 256 (406)
.++.|.+||..+.+.+..+... ......++|+|||++|++++. ++.|.++| .+++.+.. +....
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----- 168 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----- 168 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----
Confidence 3678999999988877665432 123468999999999998874 47899999 99988877 65432
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-----ecCCC-eEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-----VVREP-VSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~-i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
++.+.|.++. .| .+...++.+.++|. +++...... ....+ .....+.+++..++..+..+.+.+.|+.
T Consensus 169 ~~~~~~~~~~---~~--~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~ 242 (373)
T 2mad_H 169 CYHIHPGAPS---TF--YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADIS 242 (373)
T ss_pred eEEEEeCCCc---eE--EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEecc
Confidence 3556777765 22 23456889999999 777663322 11122 1234566766655555578899999997
Q ss_pred Cce--EEEEeec--c-------cccceEEEEEcCCCCeEEEEEC----------CCcEEEEEecCCcCCCCch
Q 015490 331 SLQ--VRTAVKK--A-------HLGIVTALAFSYDSRALVSASM----------DSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 331 ~~~--~~~~~~~--~-------~~~~v~~~~~sp~~~~l~s~s~----------dg~i~iw~~~~~~~~~~~~ 382 (406)
+.. .+..+.. . .......+.++|+++.+..+.. ++.|.+.|+.+++.+..++
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~ 315 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS 315 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE
Confidence 542 2222210 0 1122345789999888777543 3579999999988876664
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=1.4e-12 Score=117.34 Aligned_cols=181 Identities=13% Similarity=0.010 Sum_probs=131.5
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccceee-cceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRR-LGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
.+..+++++....+++++...+.+|..+... .... -.. ..+......... |+.++| |+++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~--~~~~~~~~--~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLR--DHITSDST--PLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHH--HHHHSSSC--CCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhh--hhhccccc--cccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 6899999999999999987777776544221 0000 000 011111223445 999999 99999998 8899999
Q ss_pred EeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEE
Q 015490 194 FKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIA 273 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (406)
||+.+.........+...+.++.+.+. .+++++.||.+.+||+.++.... ....+.+++|+|+|.
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG~-------- 175 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQL-------- 175 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSEE--------
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCce--------
Confidence 999877665556666667888887654 38889999999999999877643 234689999999982
Q ss_pred EEcCCCcEEEEEeCCCceE--EEEe------e---ecCCCeEEEEEcCCCCEEEEE
Q 015490 274 AITDRGASIVTWNTTTWKR--IRTK------Q---VVREPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 274 ~~~~~~~~i~~~d~~~~~~--~~~~------~---~~~~~i~~~~~sp~~~~l~~~ 318 (406)
+.+..||.+++|+...... ..++ . .|...|.+++|.+++.++++-
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 2345689999998887765 4555 2 256789999999999988873
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=9.9e-13 Score=118.36 Aligned_cols=174 Identities=14% Similarity=0.065 Sum_probs=127.3
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc---------e-EeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEc
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLE---------I-ILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDL 238 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~---------~-~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~ 238 (406)
.+..+++++...++++|+.+ .+.+|++...+ . ......... |+.++| |+++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68899999999999999987 56669875433 1 111223445 999999 89999988 7899999999
Q ss_pred CCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEE
Q 015490 239 ASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 318 (406)
++.........+ ...+..+.+.+. . ++....+|.|.+||+.++.... +...|++++|||+| ++.|
T Consensus 114 ~sl~~~~~~~~~-~~~v~~i~~~~p--~------~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 114 EELSEFRTVTSF-EKPVFQLKNVNN--T------LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSTTCEEEEEEC-SSCEEEEEECSS--E------EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEE
T ss_pred hhhhccCcccee-ecceeeEEecCC--C------EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEE
Confidence 876544333332 233556655543 2 2333578999999999876543 23479999999999 7789
Q ss_pred eCCCcEEEEECCCceE--EEEeec--------ccccceEEEEEcCCCCeEEEEE
Q 015490 319 TASGDISIIDSSSLQV--RTAVKK--------AHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 319 ~~dg~i~i~d~~~~~~--~~~~~~--------~~~~~v~~~~~sp~~~~l~s~s 362 (406)
..||++++|+...... ...+.. +|...|.++.|.+++.++++-+
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999999999887775 445521 3678899999999999888643
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.46 E-value=5.5e-12 Score=113.22 Aligned_cols=224 Identities=9% Similarity=-0.067 Sum_probs=141.1
Q ss_pred EEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee----------CCCeEEEEeCCCcceEeeee
Q 015490 137 RLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS----------ENGNLRVFKWPSLEIILNES 206 (406)
Q Consensus 137 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~dg~i~vwd~~~~~~~~~~~ 206 (406)
+++.+|..+.+.+..+.. +..+ .+.++||+++++++. .++.|.+||..+++.+..+.
T Consensus 47 ~vsvID~~t~~v~~~i~v-----------G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG-----------AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEE-----------CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCCeEEEEEeC-----------CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 667788776655554433 2334 799999999888886 36899999999999988875
Q ss_pred ccC-------CceeEEEEccCCCEEEEEeC--CCCEEE--EEcCCCeeeeecccCCc------ceEEEEEEEcCCCC---
Q 015490 207 EAH-------ASVKDLSFSPDGKFLVSLGN--RGPGRV--WDLASSAVATPLAKEND------ELFASCRFSPLNNE--- 266 (406)
Q Consensus 207 ~~~-------~~i~~~~~s~~~~~l~s~s~--d~~i~i--wd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--- 266 (406)
.+. .....++++|||++++++.. +..+.+ +|..+ +..+..... ..-..+.++++++.
T Consensus 114 v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred CCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 431 23578999999999998874 456888 88866 222221100 00001122222211
Q ss_pred -------------------------------ceEEEEEEEcCCCcEEEEEeCCCce--EEEEeeec----------CCCe
Q 015490 267 -------------------------------DYVLYIAAITDRGASIVTWNTTTWK--RIRTKQVV----------REPV 303 (406)
Q Consensus 267 -------------------------------~~~l~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~----------~~~i 303 (406)
...+ + .. +. +.+.+.|..+.. .+..+... ....
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~-~-~v-s~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML-V-WA-VA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE-E-EC-BS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCccccccCCEE-E-EE-cC-CEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 0000 0 00 11 455666664321 22211110 0111
Q ss_pred EEEEEcCCCCEEEEEeC-C--------CcEEEEECCCceEEEEeecccccceEEEEEcCCCCe-EEEEE-CCCcEEEEEe
Q 015490 304 SSFNVSADGKLLAVGTA-S--------GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRA-LVSAS-MDSSVRVTVI 372 (406)
Q Consensus 304 ~~~~~sp~~~~l~~~~~-d--------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~s-~dg~i~iw~~ 372 (406)
..+.++||++.++++.. . +.+.++|+.+.+.+..+..+ ....+++|+|||++ +++.. .++.|.++|+
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 22689999998887643 2 35679999999999888632 36889999999985 56666 5999999999
Q ss_pred cCCcCCCCch
Q 015490 373 EDKKKSGGLN 382 (406)
Q Consensus 373 ~~~~~~~~~~ 382 (406)
.+.+.+..++
T Consensus 345 ~t~kvv~~I~ 354 (368)
T 1mda_H 345 ASDQDQSSVE 354 (368)
T ss_dssp SSCEEEEECC
T ss_pred CCCcEEEEEE
Confidence 9998776654
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=1.1e-10 Score=104.81 Aligned_cols=242 Identities=13% Similarity=0.116 Sum_probs=153.8
Q ss_pred CCceEEEEccCCCeEEEEe---cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC---
Q 015490 114 DLPYRMAIHPHGDGIICAL---QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE--- 187 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--- 187 (406)
..+..++++|+|+.+++.. ++..+||.++ +++ ...+.. .. .....+-..+..++++++|+++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~-~~~~p~---~~-~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDG-LIPFPP---QS-GNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTE-EEESCC---CC-SSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCC-eecCCC---cc-cCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 6789999999999877753 2336788877 232 221110 00 001123367899999999987766443
Q ss_pred --CCeEEEEeCCCcceEeeeecc------CCceeEEEEccCCCEE-EEEe---CCCCEEEEEcCCCeeeeecccCC----
Q 015490 188 --NGNLRVFKWPSLEIILNESEA------HASVKDLSFSPDGKFL-VSLG---NRGPGRVWDLASSAVATPLAKEN---- 251 (406)
Q Consensus 188 --dg~i~vwd~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l-~s~s---~d~~i~iwd~~~~~~~~~~~~~~---- 251 (406)
++.|.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||+.+++....+..+.
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~ 169 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP 169 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC
T ss_pred CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc
Confidence 578999999988866555322 1256899999865554 4444 57899999998877655442210
Q ss_pred ------------------------cceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC---ce-----EEE--Eee
Q 015490 252 ------------------------DELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT---WK-----RIR--TKQ 297 (406)
Q Consensus 252 ------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~---~~-----~~~--~~~ 297 (406)
......++|+|+++. +|+. ......++.++... +. ... ...
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~---ly~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW---LYLS--PMHSTSMYRIKSADLSNLQLTDAELGSKIERY 244 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE---EEEE--ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCE---EEEE--eCCCCeEEEEEHHHhcCCCCChhhhhcceEec
Confidence 012577999999874 3333 23344666665421 00 000 111
Q ss_pred ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcE
Q 015490 298 VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSV 367 (406)
Q Consensus 298 ~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i 367 (406)
++......++++++|+++++...++.|.+||..+++........+...+.+++|.++++++++.+..+.+
T Consensus 245 g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 245 SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 2333456799999999888888899999999855664433321234568899999999888877644433
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.39 E-value=5.1e-11 Score=106.83 Aligned_cols=240 Identities=19% Similarity=0.092 Sum_probs=157.5
Q ss_pred EEEccCCCeEEEEecC----CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee--------
Q 015490 119 MAIHPHGDGIICALQN----SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS-------- 186 (406)
Q Consensus 119 ~~~sp~~~~l~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------- 186 (406)
....|+++.+++...+ .-.|+.+|..+.+.+..+.. +..+ . ++++|||+++++++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-----------G~~P-~-va~spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-----------GFLP-N-PVVADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-----------CSSC-E-EEECTTSSCEEEEEEEEEETTE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-----------CCCC-c-EEECCCCCEEEEEccccccccc
Confidence 4557899988888632 55888888876655444332 2233 4 99999999888775
Q ss_pred --CCCeEEEEeCCCcceEeeeeccC-------CceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceE
Q 015490 187 --ENGNLRVFKWPSLEIILNESEAH-------ASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELF 255 (406)
Q Consensus 187 --~dg~i~vwd~~~~~~~~~~~~~~-------~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~ 255 (406)
.++.|.+||..+++.+..+.-.. .....++++|||++++++.. ++.|.++|+.+++.+.++.....
T Consensus 105 G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--- 181 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--- 181 (386)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---
T ss_pred CCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---
Confidence 36789999999999887765322 24578999999999998874 68899999999999888864321
Q ss_pred EEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceEEEEeeec----CCCeE-EEEEc-CCCCEEEEEeCCCcEEEEE
Q 015490 256 ASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKRIRTKQVV----REPVS-SFNVS-ADGKLLAVGTASGDISIID 328 (406)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~----~~~i~-~~~~s-p~~~~l~~~~~dg~i~i~d 328 (406)
....|.+.. .|+ ..+.||.+.+.++.+ ++........ ..++. ...|. ++|++++ .+.+|.|++.|
T Consensus 182 --~~~~P~g~~---~~~--~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d 253 (386)
T 3sjl_D 182 --YHIFPTAPD---TFF--MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQID 253 (386)
T ss_dssp --EEEEEEETT---EEE--EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEE
T ss_pred --ceeecCCCc---eeE--EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEE
Confidence 122344433 122 234577788888865 4543222111 11221 23553 6776555 56689999999
Q ss_pred CCCce--EEEEee---------cccccceEEEEEcCCCCeEEEEEC----------CCcEEEEEecCCcCCCCch
Q 015490 329 SSSLQ--VRTAVK---------KAHLGIVTALAFSYDSRALVSASM----------DSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 329 ~~~~~--~~~~~~---------~~~~~~v~~~~~sp~~~~l~s~s~----------dg~i~iw~~~~~~~~~~~~ 382 (406)
+.+.. ....+. ....+....++++++++.++.... .+.|.+.|+.+++.+..++
T Consensus 254 ~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~ 328 (386)
T 3sjl_D 254 LSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE 328 (386)
T ss_dssp CTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred CCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence 97654 332221 001223445778999888877643 2579999999998877654
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.38 E-value=1.4e-10 Score=102.58 Aligned_cols=202 Identities=14% Similarity=0.096 Sum_probs=137.1
Q ss_pred CcEEEEEECCCCCEEEE-------eeCCCeEEEEeCCCcceEeeee----ccCCceeEEEEccC-CCEEEEEeCCCCEEE
Q 015490 168 GQQLALTFDSEGTIFAA-------GSENGNLRVFKWPSLEIILNES----EAHASVKDLSFSPD-GKFLVSLGNRGPGRV 235 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~-------~~~dg~i~vwd~~~~~~~~~~~----~~~~~i~~~~~s~~-~~~l~s~s~d~~i~i 235 (406)
....+++|+++|+++++ +..++.|.+||..+++...... ++...+.+++++++ +++++ ++..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEE
Confidence 45678999999988888 6778999999988776543221 13346889999999 66444 444457999
Q ss_pred EEcCCCeeeee-ccc---CCcceEEEEEEEcCCCCceEEEEEEEcCC--------------CcEEEEEeCCCceEEEEee
Q 015490 236 WDLASSAVATP-LAK---ENDELFASCRFSPLNNEDYVLYIAAITDR--------------GASIVTWNTTTWKRIRTKQ 297 (406)
Q Consensus 236 wd~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~~i~~~d~~~~~~~~~~~ 297 (406)
||.. ++.... ... .....+..++++++++ ++ ++.... .+.|..+|.. ++.....
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~----l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~- 168 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN----LW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD- 168 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC----EE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCC----EE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEec-
Confidence 9998 665433 221 1123467899999886 23 232222 2678888876 5443332
Q ss_pred ecCCCeEEEEEc----CCCCEEEEE-eCCCcEEEEECC-CceE-----EEEeecccc-cceEEEEEcCCCCeEEEEECCC
Q 015490 298 VVREPVSSFNVS----ADGKLLAVG-TASGDISIIDSS-SLQV-----RTAVKKAHL-GIVTALAFSYDSRALVSASMDS 365 (406)
Q Consensus 298 ~~~~~i~~~~~s----p~~~~l~~~-~~dg~i~i~d~~-~~~~-----~~~~~~~~~-~~v~~~~~sp~~~~l~s~s~dg 365 (406)
.+......++++ |+++.|+++ ..++.|.+||.. +++. ...+. .+. ..+..++++++|+++++...++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECCCCCEEEEEcCCC
Confidence 233456889999 999766655 457899999976 4432 12221 233 5678999999999888887889
Q ss_pred cEEEEEecCCcCCC
Q 015490 366 SVRVTVIEDKKKSG 379 (406)
Q Consensus 366 ~i~iw~~~~~~~~~ 379 (406)
.|.+||.++++.+.
T Consensus 248 ~i~~~d~~~g~~~~ 261 (314)
T 1pjx_A 248 HIEVFGPDGGQPKM 261 (314)
T ss_dssp EEEEECTTCBSCSE
T ss_pred EEEEEcCCCCcEeE
Confidence 99999988666543
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=2.7e-10 Score=100.11 Aligned_cols=203 Identities=8% Similarity=0.065 Sum_probs=136.2
Q ss_pred cEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeec
Q 015490 169 QQLALTFDSE-GTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPL 247 (406)
Q Consensus 169 ~v~~~~~s~~-g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 247 (406)
-..+..|+++ +.++++...++.|+.||..+++.. .+ .....+.+++++++|+++++ . ++.|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 3457899995 456666677899999999877653 22 23457899999999995544 4 568999999887654322
Q ss_pred cc---CCcceEEEEEEEcCCCCceEEEEEEEcC---------CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEE
Q 015490 248 AK---ENDELFASCRFSPLNNEDYVLYIAAITD---------RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLL 315 (406)
Q Consensus 248 ~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l 315 (406)
.. .....+..++++|+++ +++..... ..+.|+.+|.. ++... +.........++|+|+++.|
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~----l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGR----YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSC----EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEE
T ss_pred ecCCCCCCCCCCCEEECCCCC----EEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEE
Confidence 21 1234577899999987 23332221 33567777764 33322 22222446889999999977
Q ss_pred EEE-eCCCcEEEEEC--CCceEE--EEee--cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 316 AVG-TASGDISIIDS--SSLQVR--TAVK--KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 316 ~~~-~~dg~i~i~d~--~~~~~~--~~~~--~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
+++ +.++.|.+|++ .++... ..+. ..+.+.+..++++++|++.++...++.|..||..+++.+..+
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 655 44788999987 455432 1121 123456789999999998888777888999999888765544
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.38 E-value=3e-11 Score=110.25 Aligned_cols=237 Identities=15% Similarity=0.071 Sum_probs=156.1
Q ss_pred cCCCeEEEEecCC----eEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee----------CC
Q 015490 123 PHGDGIICALQNS----CRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS----------EN 188 (406)
Q Consensus 123 p~~~~l~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------~d 188 (406)
|+++.++++..+. -.|..+|..+.+.+..+.. +..+ .+.++|||++++++. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----------G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----------GFLP--HPVAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----------CSSC--EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----------CCCC--ceEECCCCCEEEEEeccccccccCCCC
Confidence 5677777765322 5777788776655544433 2233 799999999888876 36
Q ss_pred CeEEEEeCCCcceEeeeecc-------CCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceEEEEE
Q 015490 189 GNLRVFKWPSLEIILNESEA-------HASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELFASCR 259 (406)
Q Consensus 189 g~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 259 (406)
+.|.++|..+++.+..+.-. ......+.++|||++++++.. ++.|.+.|+.+++.+..+..... ..
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----~~ 223 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----YH 223 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----ee
Confidence 78999999999888776532 124567999999999998874 57899999999999888765321 33
Q ss_pred EEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe----eecCCCe-EEEEEcCCCCEEEEEeCCCcEEEEECCCceE
Q 015490 260 FSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK----QVVREPV-SSFNVSADGKLLAVGTASGDISIIDSSSLQV 334 (406)
Q Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~~~i-~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 334 (406)
..|++.. .|+.. +.++.+.+.+..+++..... .....++ ..+.+++++..++..+..+.|.+.|+.....
T Consensus 224 ~~p~g~~---~~v~~--~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~ 298 (426)
T 3c75_H 224 IFPASPT---VFYMN--CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGA 298 (426)
T ss_dssp EEEEETT---EEEEE--ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCE
T ss_pred eccCCCc---EEEEE--cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCce
Confidence 4455543 22222 34667777777555544221 1111111 2356789998888888889999999875442
Q ss_pred E--EEeecc---------cccceEEEEEcCCCCeEEEEEC----------CCcEEEEEecCCcCCCCch
Q 015490 335 R--TAVKKA---------HLGIVTALAFSYDSRALVSASM----------DSSVRVTVIEDKKKSGGLN 382 (406)
Q Consensus 335 ~--~~~~~~---------~~~~v~~~~~sp~~~~l~s~s~----------dg~i~iw~~~~~~~~~~~~ 382 (406)
. ..+... .......++++|+++.+++... ++.|.+.|+.+.+.+..++
T Consensus 299 ~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~ 367 (426)
T 3c75_H 299 TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE 367 (426)
T ss_dssp EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE
Confidence 2 111100 0111223789999887766542 3579999999998877664
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.36 E-value=2.2e-11 Score=119.91 Aligned_cols=200 Identities=15% Similarity=0.093 Sum_probs=131.6
Q ss_pred CcEEEEEECCCCCEEEEe-----eCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCC----------
Q 015490 168 GQQLALTFDSEGTIFAAG-----SENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGP---------- 232 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~---------- 232 (406)
..+..++|||||++||.+ +...+|++||+.+++.+..... ......++|+ |++.|+.++.+..
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-EEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC-CceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 457788999999999853 3345799999999986543211 1123678999 9999999987743
Q ss_pred ---EEEEEcCCCee--eeecccC--CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce-EEEEeeecCCCeE
Q 015490 233 ---GRVWDLASSAV--ATPLAKE--NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK-RIRTKQVVREPVS 304 (406)
Q Consensus 233 ---i~iwd~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~i~ 304 (406)
|++|++.++.. ...+... +......+.|+|+++. +++....+.....|+++|+.++. ....+..+.....
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~--l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF--LLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE--EEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE--EEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 99999987653 2222221 1234568899999985 22222223344699999998763 3445555555444
Q ss_pred EEEEcCCCCEEEEEeC-C---CcEEEEECCCceE--EEEeecccccceEEEEEcCCCCeEEEEECCC---cEEEEEecCC
Q 015490 305 SFNVSADGKLLAVGTA-S---GDISIIDSSSLQV--RTAVKKAHLGIVTALAFSYDSRALVSASMDS---SVRVTVIEDK 375 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~-d---g~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg---~i~iw~~~~~ 375 (406)
.. ++++|..|+..+. + +.|..+|+.++.. ...+. .|...+. .|++++++|+....++ .|++|++..+
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 54 6677776665544 3 5799999987654 23333 4555554 8999998887666544 6888887643
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=1.6e-10 Score=106.10 Aligned_cols=198 Identities=11% Similarity=0.036 Sum_probs=135.5
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCC--CEEEEEcCCCeeee
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRG--PGRVWDLASSAVAT 245 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~--~i~iwd~~~~~~~~ 245 (406)
.....++|+++++++++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4578999999999888877789999999987766544333 33334 99999999999888766 78888887654433
Q ss_pred ec---ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEE----eeecCCCe-E-EEEEcCC-CCEE
Q 015490 246 PL---AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRT----KQVVREPV-S-SFNVSAD-GKLL 315 (406)
Q Consensus 246 ~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~~~i-~-~~~~sp~-~~~l 315 (406)
.+ .......+.+++++|++.. +|+ ...++.|+.||..++..... .......- . .++|+|+ +.++
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~---lyv---~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEW---LYF---VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSE---EEE---ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCe---EEE---EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 32 1112334567899995543 333 34578999999987653322 11111221 3 8999995 5555
Q ss_pred EEEeCCCcEEEEECCCceEEEEeecccc---------------cceEEEEEcCCCCeEEEEE-CCCcEEEEEecCCc
Q 015490 316 AVGTASGDISIIDSSSLQVRTAVKKAHL---------------GIVTALAFSYDSRALVSAS-MDSSVRVTVIEDKK 376 (406)
Q Consensus 316 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~v~~~~~sp~~~~l~s~s-~dg~i~iw~~~~~~ 376 (406)
++-..++.|+.|+.... ...+. ++. .....++++|+|+++++-+ .+++|+.|++.+++
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 55555788999997643 22222 221 3478999999999878777 78999999976654
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=5.6e-11 Score=111.02 Aligned_cols=232 Identities=10% Similarity=0.047 Sum_probs=158.9
Q ss_pred CCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEE-C-CCCCEEEEee---------------
Q 015490 124 HGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTF-D-SEGTIFAAGS--------------- 186 (406)
Q Consensus 124 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s-~~g~~l~~~~--------------- 186 (406)
||+++++.....-+|..++..+.+....+ .+........+++ + |+++++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii----------~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL----------EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE----------ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE----------eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 88999987755557777887765543322 2223345778887 5 8999888874
Q ss_pred ---CCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCC--------------------------------
Q 015490 187 ---ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRG-------------------------------- 231 (406)
Q Consensus 187 ---~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~-------------------------------- 231 (406)
.++.+.+.|.++.+...++.-.. ....++.+|||+++++++.+.
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 34689999999988887776433 457788999999999888543
Q ss_pred ------CEEEEEcCC--Cee-eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce-----------
Q 015490 232 ------PGRVWDLAS--SAV-ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK----------- 291 (406)
Q Consensus 232 ------~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~----------- 291 (406)
.|.+.|.++ ++. +..+... ....++.++|++++ +++++..+..|.++|+.+.+
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~-----v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKH-----LCVAGKLSPTVTVLDVTRFDAVFYENADPRS 321 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSE-----EEEECTTSSBEEEEEGGGHHHHHHSCCCGGG
T ss_pred CeeEECcEEEEeCcccCCceeEEEEecC--CCceEEEEcCCCCE-----EEEeCCCCCeEEEEECcccccccccccCccc
Confidence 356666665 333 3333322 12347899999995 77788889999999999753
Q ss_pred -EEEEeeecCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC----------ceEEEEeecccccc-----eEEEEEcCC
Q 015490 292 -RIRTKQVVREPVSSFNVSADGKLLAVG-TASGDISIIDSSS----------LQVRTAVKKAHLGI-----VTALAFSYD 354 (406)
Q Consensus 292 -~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~----------~~~~~~~~~~~~~~-----v~~~~~sp~ 354 (406)
........ .....++|+|+| ++++. ..|++|.+||+.+ .+.+.++. .|-.+ -.++.++||
T Consensus 322 ~v~~~v~vG-~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid-V~yqpGh~~~~~g~t~~~D 398 (595)
T 1fwx_A 322 AVVAEPELG-LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD-VHYQPGHLKTVMGETLDAT 398 (595)
T ss_dssp GEEECCBCC-SCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-CSSCEEEEEETTTTSTTCC
T ss_pred ceEEEcCCC-CCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-cccccccceeccceEeCCC
Confidence 34444433 456899999999 55554 4599999999977 55666665 34332 123356899
Q ss_pred CCeEEEEEC---CCc----------EEEEEecCCc
Q 015490 355 SRALVSASM---DSS----------VRVTVIEDKK 376 (406)
Q Consensus 355 ~~~l~s~s~---dg~----------i~iw~~~~~~ 376 (406)
|++|++... |+- -.++|+..++
T Consensus 399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 399 NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 999998753 332 1788885443
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.30 E-value=2.3e-09 Score=95.47 Aligned_cols=195 Identities=13% Similarity=0.008 Sum_probs=130.5
Q ss_pred EEEEEECCCC-CEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 170 QLALTFDSEG-TIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 170 v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
..+..|+|++ .++++...++.|..||..+++... +. ....+.+++|+++|+++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 3567899975 566666678899999998775432 22 23578999999999876654 44 59999998877543222
Q ss_pred c---CCcceEEEEEEEcCCCCceEEEEEEEcC----CCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe-C
Q 015490 249 K---ENDELFASCRFSPLNNEDYVLYIAAITD----RGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT-A 320 (406)
Q Consensus 249 ~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~ 320 (406)
. .....+..+.++|+++ +++..... ..+.|+.+| +++... +.........++|+|+++.++.+. .
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~----l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGA----LWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSC----EEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT
T ss_pred CCCCCCCCCCCCEEECCCCC----EEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC
Confidence 1 1234578899999987 23332221 246777777 444332 322334567899999999776654 4
Q ss_pred CCcEEEEECC--Cc-eE-----EEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 321 SGDISIIDSS--SL-QV-----RTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 321 dg~i~i~d~~--~~-~~-----~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++.|.+||+. ++ .. ...+. .....+..++++++|.++++...++.|.+|+. +++.
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNH 262 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCE
T ss_pred CCEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCE
Confidence 6889999986 55 31 22221 23455788999999988877767788999987 4544
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=3.4e-09 Score=93.38 Aligned_cols=211 Identities=11% Similarity=0.066 Sum_probs=130.4
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQ 169 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (406)
.++.++... ....+..+...+..++++++|+.+++. .+.-.|+.++.. +. ...+... ..-.....
T Consensus 68 ~i~~~~~~g------~~~~~~~~~~~~~gl~~d~dG~l~v~~-~~~~~v~~~~~~-g~-~~~~~~~------~~~~~~~~ 132 (305)
T 3dr2_A 68 RVLGWREDG------TVDVLLDATAFTNGNAVDAQQRLVHCE-HGRRAITRSDAD-GQ-AHLLVGR------YAGKRLNS 132 (305)
T ss_dssp EEEEEETTS------CEEEEEESCSCEEEEEECTTSCEEEEE-TTTTEEEEECTT-SC-EEEEECE------ETTEECSC
T ss_pred EEEEEeCCC------CEEEEeCCCCccceeeECCCCCEEEEE-CCCCEEEEECCC-CC-EEEEEec------cCCCccCC
Confidence 456666633 234555667789999999999855544 333356666653 22 1111100 00011234
Q ss_pred EEEEEECCCCCEEEE----eeC-------------CCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC--
Q 015490 170 QLALTFDSEGTIFAA----GSE-------------NGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR-- 230 (406)
Q Consensus 170 v~~~~~s~~g~~l~~----~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d-- 230 (406)
+..++++++|+++++ |.. .+.|..+|..+++..... .......++|+||++.|+++...
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCc
Confidence 678999999998886 432 256777887666644332 33456889999999988777665
Q ss_pred ----CCEEEEEcCCCeee--eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeE
Q 015490 231 ----GPGRVWDLASSAVA--TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVS 304 (406)
Q Consensus 231 ----~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~ 304 (406)
+.|.+|++..+... ..+..........+++.++++- +++ . .+.|.+||.. ++.+..+..+. .+.
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-----wv~--~-~~gv~~~~~~-g~~~~~~~~~~-~~~ 280 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-----WSS--S-GTGVCVFDSD-GQLLGHIPTPG-TAS 280 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-----EEC--C-SSEEEEECTT-SCEEEEEECSS-CCC
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-----EEe--c-CCcEEEECCC-CCEEEEEECCC-cee
Confidence 68999998765411 1111111222346788888872 222 2 3459999984 56667776654 578
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEE
Q 015490 305 SFNVSADGKLLAVGTASGDISIID 328 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~dg~i~i~d 328 (406)
+++|+|+++.|++++.++ +..++
T Consensus 281 ~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 281 NCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEEEeCCCCEEEEEcCCe-EEEEE
Confidence 999999999898888764 44333
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=1.8e-10 Score=103.50 Aligned_cols=202 Identities=14% Similarity=0.148 Sum_probs=133.7
Q ss_pred CcEEEEEECCCCCEEEEee--CCCeEEEEeCCCcceEeeee-------ccCCceeEEEEccCCCEEEEEeC-----CCCE
Q 015490 168 GQQLALTFDSEGTIFAAGS--ENGNLRVFKWPSLEIILNES-------EAHASVKDLSFSPDGKFLVSLGN-----RGPG 233 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~--~dg~i~vwd~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~s~s~-----d~~i 233 (406)
..+..++++++|+++++.. .++.++||.+.+++.. .+. .+-..+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5678999999999988853 2342455555455432 221 12237899999999876555433 5789
Q ss_pred EEEEcCCCeeeeecccC-----CcceEEEEEEEcCCCCceEEEEEEEcC---CCcEEEEEeCCCceEEEEeeec------
Q 015490 234 RVWDLASSAVATPLAKE-----NDELFASCRFSPLNNEDYVLYIAAITD---RGASIVTWNTTTWKRIRTKQVV------ 299 (406)
Q Consensus 234 ~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~i~~~d~~~~~~~~~~~~~------ 299 (406)
.+||+.+++....+... ....+..+++++++.. +|+ +.. .++.|.+||+.+++..+.+..|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~---~yv--td~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNF---VYI--SDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTE---EEE--EECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCE---EEE--EcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 99999998876655432 1234568999987653 333 333 5789999999887766554321
Q ss_pred -----------------------CCCeEEEEEcCCCCEEEEEeCCC-cEEEEECC---Cce-----EEE--Eeecccccc
Q 015490 300 -----------------------REPVSSFNVSADGKLLAVGTASG-DISIIDSS---SLQ-----VRT--AVKKAHLGI 345 (406)
Q Consensus 300 -----------------------~~~i~~~~~sp~~~~l~~~~~dg-~i~i~d~~---~~~-----~~~--~~~~~~~~~ 345 (406)
...+..++|+|+|+.|+++..++ .+..++.. .+. ... ... ++.+.
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~ 249 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPI 249 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCS
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCC
Confidence 02357899999999998887765 55555532 110 000 111 33445
Q ss_pred eEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 346 VTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 346 v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
...++++++|.++++...++.|.+||.++++
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 6789999999999988889999999984543
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.28 E-value=3.6e-09 Score=89.87 Aligned_cols=206 Identities=11% Similarity=0.127 Sum_probs=144.2
Q ss_pred eeeecccccC--cEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEe-CCCC
Q 015490 159 KVLSQLENVG--QQLALTFDSEGTIFAAGSE--NGNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLG-NRGP 232 (406)
Q Consensus 159 ~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s-~d~~ 232 (406)
+.+.++.+.. ....+.|++|+.++++.+. ++.|+++|+.+++.+..+.-... ....+++. +..|+.+. .++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 3455555553 3579999998765555443 57999999999998877653222 33345554 45555554 5789
Q ss_pred EEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-----CCeEEEE
Q 015490 233 GRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-----EPVSSFN 307 (406)
Q Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~i~~~~ 307 (406)
+.++|..+.+.+.++...... ...++++++. +| ++. .++.|.++|..+.+.+..+.... ..+..+.
T Consensus 88 v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~---l~--vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKD---GWGLATDGKI---LY--GSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSS---CCEEEECSSS---EE--EEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEEEECCCCcEEEEEECCCCC---eEEEEECCCE---EE--EEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 999999999998888644111 2446678876 32 333 57899999999998888776432 2367788
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCceEEEEeecc-c-----------ccceEEEEEcCCCCe-EEEEECCCcEEEEEecC
Q 015490 308 VSADGKLLAVGTASGDISIIDSSSLQVRTAVKKA-H-----------LGIVTALAFSYDSRA-LVSASMDSSVRVTVIED 374 (406)
Q Consensus 308 ~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~-----------~~~v~~~~~sp~~~~-l~s~s~dg~i~iw~~~~ 374 (406)
|. +|+..+....++.|.+.|..+++.+..+..+ . ......++|+|+++. ++++...++|.+-++..
T Consensus 159 ~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 159 YI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 88 6754444445789999999999999888632 1 024589999999765 55666788999999977
Q ss_pred Cc
Q 015490 375 KK 376 (406)
Q Consensus 375 ~~ 376 (406)
.+
T Consensus 238 ~~ 239 (266)
T 2iwa_A 238 VR 239 (266)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=7.9e-13 Score=119.96 Aligned_cols=185 Identities=15% Similarity=0.023 Sum_probs=106.0
Q ss_pred CCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEE-
Q 015490 178 EGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFA- 256 (406)
Q Consensus 178 ~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 256 (406)
++..+++++.||.|+.||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||.++|+.+..+..+....+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999998877765 44555555667777887889999999999988876555432111110
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
...+..++. +..++.++.|+.||..+++.+..+..+. ...++|++..+++++.++.|+.||.++++.+.
T Consensus 86 sp~~~~~~~-------v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 SPCRSSDGI-------LYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CSCC------------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred CceEecCCE-------EEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 011111221 2334568899999999999887776543 23456788899999999999999999998766
Q ss_pred EeecccccceEEEEEcCCC---CeEEEEECCCcEEEEEecCCcCC
Q 015490 337 AVKKAHLGIVTALAFSYDS---RALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 337 ~~~~~~~~~v~~~~~sp~~---~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.+. .+. .....++++. ..+++++.||.|+.||..+++.+
T Consensus 155 ~~~-~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 155 NAT-YFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp EEE-EEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred eEe-ccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 553 111 1223334432 45777889999999999888753
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.27 E-value=2.6e-09 Score=95.86 Aligned_cols=244 Identities=9% Similarity=-0.060 Sum_probs=146.2
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---------CCeEEEEEecccccceeecceecccee
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---------NSCRLFEWDEVENTEIRRLGVKISEKV 160 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
.+..+|..+. +.+.++.....+ .+.++||+++++++.. .+-.|..+|..+.+....+.+....+
T Consensus 47 ~vsvID~~t~----~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~- 119 (368)
T 1mda_H 47 ENWVSCAGCG----VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR- 119 (368)
T ss_dssp EEEEEETTTT----EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-
T ss_pred eEEEEECCCC----eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-
Confidence 5666777663 355666555555 7999999999988851 23467778887776666554310000
Q ss_pred eecccccCcEEEEEECCCCCEEEEeeC--CCeEEE--EeCCCcceEeeeeccC------------------CceeEEE--
Q 015490 161 LSQLENVGQQLALTFDSEGTIFAAGSE--NGNLRV--FKWPSLEIILNESEAH------------------ASVKDLS-- 216 (406)
Q Consensus 161 ~~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~v--wd~~~~~~~~~~~~~~------------------~~i~~~~-- 216 (406)
. . .......++++|||++++++.. +..+.+ +|..+ +..+.... +.+..+.
T Consensus 120 ~--~-~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 120 F--S-VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp C--C-BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECC
T ss_pred c--c-cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECc
Confidence 0 0 0123456899999999998864 467888 88865 11111000 0000000
Q ss_pred ------------------------EccCCCEEEEEeCCCCEEEEEcCCCe--eeeecccC------Ccce---EEEEEEE
Q 015490 217 ------------------------FSPDGKFLVSLGNRGPGRVWDLASSA--VATPLAKE------NDEL---FASCRFS 261 (406)
Q Consensus 217 ------------------------~s~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~------~~~~---~~~~~~~ 261 (406)
.++++..++..+. +.+.+.|..+.. ....+... .... ...++++
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred cccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 0333344444444 667777775432 22222111 0101 1126799
Q ss_pred cCCCCceEEEEEEEcC-C-----CcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCE-EEEEe-CCCcEEEEECCCce
Q 015490 262 PLNNEDYVLYIAAITD-R-----GASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKL-LAVGT-ASGDISIIDSSSLQ 333 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~-~-----~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~-~dg~i~i~d~~~~~ 333 (406)
|++++ +|+..... . ...+.++|+.+.+.+.++.... ....+.|+|||++ +++.. .++.|.++|+.+++
T Consensus 273 ~dg~~---lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 273 KNTDG---IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp TTTTE---EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCCCE---EEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 99985 44433312 2 2345699999999988887654 5789999999984 55555 48999999999999
Q ss_pred EEEEeecccccceEEEEEcC
Q 015490 334 VRTAVKKAHLGIVTALAFSY 353 (406)
Q Consensus 334 ~~~~~~~~~~~~v~~~~~sp 353 (406)
.+.++. .. .....+++.+
T Consensus 349 vv~~I~-vg-~~P~~i~~~~ 366 (368)
T 1mda_H 349 DQSSVE-LD-KGPESLSVQN 366 (368)
T ss_dssp EEEECC-CC-SCCCEEECCC
T ss_pred EEEEEE-CC-CCCCEEEeec
Confidence 999886 33 3345565543
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=2e-09 Score=105.29 Aligned_cols=245 Identities=9% Similarity=0.029 Sum_probs=158.7
Q ss_pred CCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEE-EEECCCCCEEEEeeC------CCeEEEEeC
Q 015490 124 HGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLA-LTFDSEGTIFAAGSE------NGNLRVFKW 196 (406)
Q Consensus 124 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~------dg~i~vwd~ 196 (406)
++..+++++ ...+|+-+|..+++....+....... ....+.+ ... .+..+++++. +|.|+.+|.
T Consensus 127 ~~~~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~------~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~ 197 (677)
T 1kb0_A 127 WKGKVYVGA-WDGRLIALDAATGKEVWHQNTFEGQK------GSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDA 197 (677)
T ss_dssp ETTEEEEEC-TTSEEEEEETTTCCEEEEEETTTTCC------SSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEET
T ss_pred ECCEEEEEc-CCCEEEEEECCCCCEEeeecCCcCcC------cCcccccCcEE--ECCEEEEEecccccCCCCEEEEEEC
Confidence 345566664 22367778888887776654310000 0001100 001 1334555543 689999999
Q ss_pred CCcceEeeeeccCC--------------------------------ceeEEEEccCCCEEEEEeCCC-------------
Q 015490 197 PSLEIILNESEAHA--------------------------------SVKDLSFSPDGKFLVSLGNRG------------- 231 (406)
Q Consensus 197 ~~~~~~~~~~~~~~--------------------------------~i~~~~~s~~~~~l~s~s~d~------------- 231 (406)
.+|+.+..+..... ....++++|++..++.++.++
T Consensus 198 ~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~g 277 (677)
T 1kb0_A 198 ETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGG 277 (677)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCC
T ss_pred CCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCC
Confidence 99998766543211 113578889888888887654
Q ss_pred ------CEEEEEcCCCeeeeecccCCc--------ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee
Q 015490 232 ------PGRVWDLASSAVATPLAKEND--------ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ 297 (406)
Q Consensus 232 ------~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~ 297 (406)
.|..+|.++|+..-.+...+. .....+....+++. .-.++.++.+|.++++|..+++.+....
T Consensus 278 d~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~---~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 278 DNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP---RKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE---EEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE---eeEEEEECCCCEEEEEECCCCCEecccc
Confidence 499999999998766543211 11112333345531 1145667889999999999999887665
Q ss_pred ecCCC-----------e------------------------EEEEEcCCCCEEEEEeCC---------------------
Q 015490 298 VVREP-----------V------------------------SSFNVSADGKLLAVGTAS--------------------- 321 (406)
Q Consensus 298 ~~~~~-----------i------------------------~~~~~sp~~~~l~~~~~d--------------------- 321 (406)
..... + ..++++|++.++++...+
T Consensus 355 ~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~ 434 (677)
T 1kb0_A 355 FVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKP 434 (677)
T ss_dssp SSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTST
T ss_pred ccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccc
Confidence 32100 1 156889988888876432
Q ss_pred ----------------------CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 322 ----------------------GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 322 ----------------------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
|.|..||+.+++.+-.+. +..++....++.++..++.++.||.+++||.++++.+.
T Consensus 435 ~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 435 QSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE--HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp TGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC--CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 789999999999988875 44455555667778888889999999999999999865
Q ss_pred Cch
Q 015490 380 GLN 382 (406)
Q Consensus 380 ~~~ 382 (406)
++.
T Consensus 513 ~~~ 515 (677)
T 1kb0_A 513 EAP 515 (677)
T ss_dssp EEE
T ss_pred eee
Confidence 553
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=6.5e-09 Score=101.84 Aligned_cols=243 Identities=11% Similarity=0.072 Sum_probs=153.3
Q ss_pred CCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEECCCCCEEEEee------CCCeEEEEeCC
Q 015490 125 GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTFDSEGTIFAAGS------ENGNLRVFKWP 197 (406)
Q Consensus 125 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~------~dg~i~vwd~~ 197 (406)
+..+++++ ...+|+-+|..+++............ ...... .++. .++. +++++ .+|.|+.||..
T Consensus 121 ~g~v~v~~-~dg~l~AlDa~TG~~~W~~~~~~~~~--~~~~~~~sP~v-----~~g~-v~vg~~~~~~~~~g~v~a~D~~ 191 (689)
T 1yiq_A 121 KGKVYVGV-LDGRLEAIDAKTGQRAWSVDTRADHK--RSYTITGAPRV-----VNGK-VVIGNGGAEFGVRGYVTAYDAE 191 (689)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECCSCTT--SCCBCCSCCEE-----ETTE-EEECCBCTTTCCBCEEEEEETT
T ss_pred CCEEEEEc-cCCEEEEEECCCCCEeeeecCcCCCC--CCccccCCcEE-----ECCE-EEEEeCCCccCCCCEEEEEECC
Confidence 45566664 22367778888887776654310000 000000 1111 1444 44443 37899999999
Q ss_pred CcceEeeeeccC-------------------------------CceeEEEEccCCCEEEEEeCCCC--------------
Q 015490 198 SLEIILNESEAH-------------------------------ASVKDLSFSPDGKFLVSLGNRGP-------------- 232 (406)
Q Consensus 198 ~~~~~~~~~~~~-------------------------------~~i~~~~~s~~~~~l~s~s~d~~-------------- 232 (406)
+|+.+..+.... .....++++|+..+++.++.++.
T Consensus 192 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~ 271 (689)
T 1yiq_A 192 TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDN 271 (689)
T ss_dssp TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCC
T ss_pred CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 999876654210 01125788898888998887753
Q ss_pred -----EEEEEcCCCeeeeecccCCc--------ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec
Q 015490 233 -----GRVWDLASSAVATPLAKEND--------ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV 299 (406)
Q Consensus 233 -----i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 299 (406)
|..+|.++|+.+-.+...+. ..........+++. .-+++.++.+|.++++|.++++.+......
T Consensus 272 ~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~---~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 348 (689)
T 1yiq_A 272 LFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP---RKVLMQAPKNGFFYVIDRATGELLSAKGIV 348 (689)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE---EEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred eeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE---EEEEEEECCCCeEEEEECCCCCEecccccc
Confidence 99999999998776543211 11111222234431 113556788999999999999987543221
Q ss_pred C---------------------------------------CCeEEEEEcCCCCEEEEEeC--------------------
Q 015490 300 R---------------------------------------EPVSSFNVSADGKLLAVGTA-------------------- 320 (406)
Q Consensus 300 ~---------------------------------------~~i~~~~~sp~~~~l~~~~~-------------------- 320 (406)
. .....++++|+..++++...
T Consensus 349 ~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~ 428 (689)
T 1yiq_A 349 PQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKS 428 (689)
T ss_dssp CCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTT
T ss_pred ccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccc
Confidence 1 00123788898888877632
Q ss_pred -------------------------CCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 321 -------------------------SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 321 -------------------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+|.|+.||+.+++.+-.+. +..++..-.++..+.+++.++.||.|+.||.+++
T Consensus 429 ~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 429 MYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP--YVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp SCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc--CCCCccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 3779999999999988875 3334444456667888999999999999999999
Q ss_pred cCCCCc
Q 015490 376 KKSGGL 381 (406)
Q Consensus 376 ~~~~~~ 381 (406)
+.+-++
T Consensus 507 ~~lw~~ 512 (689)
T 1yiq_A 507 EKLWEQ 512 (689)
T ss_dssp CEEEEE
T ss_pred ccceee
Confidence 886443
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.22 E-value=8.2e-08 Score=82.67 Aligned_cols=223 Identities=9% Similarity=0.004 Sum_probs=139.4
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEE-EeeCCCeEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA-AGSENGNLR 192 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~dg~i~ 192 (406)
..+..++|++++..|+.+....-+|+.++......... . .........+++++++..++ +-...+.|.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~---------~--~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~ 104 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI---------I--RQDLGSPEGIALDHLGRTIFWTDSQLDRIE 104 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE---------E--CTTCCCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE---------E--ECCCCCccEEEEEecCCeEEEEECCCCEEE
Confidence 45789999998888887764444676676543221110 0 01224678899999765554 445567999
Q ss_pred EEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC---CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceE
Q 015490 193 VFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN---RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
+++++.................++++|++..|+.+.. .+.|..+++.... ...+..........+++++++..
T Consensus 105 ~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~--- 180 (267)
T 1npe_A 105 VAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQ--- 180 (267)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTE---
T ss_pred EEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCE---
Confidence 9998643322222222245789999997666666554 3678888875432 22221112234678999998774
Q ss_pred EEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCceEEEEeecccccceEE
Q 015490 270 LYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT-ASGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
+..+....+.|..+|............ ......++.. +..|+++. ..+.|.++|..+++.+..+..+.......
T Consensus 181 --lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~g 255 (267)
T 1npe_A 181 --LCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYG 255 (267)
T ss_dssp --EEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCC
T ss_pred --EEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccce
Confidence 334445678999999986544333332 2344667654 45555555 46889999999999888875332234678
Q ss_pred EEEcCCCC
Q 015490 349 LAFSYDSR 356 (406)
Q Consensus 349 ~~~sp~~~ 356 (406)
+++.|++.
T Consensus 256 i~~~~~~~ 263 (267)
T 1npe_A 256 ITIALSQC 263 (267)
T ss_dssp EEEECSCC
T ss_pred eeecCccC
Confidence 88888764
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.19 E-value=1.8e-08 Score=98.55 Aligned_cols=236 Identities=14% Similarity=0.129 Sum_probs=155.2
Q ss_pred CeEEEEEecccccceeecceeccce--ee----------------ecc---cccCcEEEEEECCCCCEEEEeeCCC----
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEK--VL----------------SQL---ENVGQQLALTFDSEGTIFAAGSENG---- 189 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~--~~----------------~~~---~~~~~v~~~~~s~~g~~l~~~~~dg---- 189 (406)
...|+-+|..+++.+..+...+... .. ... .+......+++++++.+++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 4578888888888777665421110 00 000 1112223578889888888877654
Q ss_pred ---------------eEEEEeCCCcceEeeeeccCC---------ceeEEEEccCC---CEEEEEeCCCCEEEEEcCCCe
Q 015490 190 ---------------NLRVFKWPSLEIILNESEAHA---------SVKDLSFSPDG---KFLVSLGNRGPGRVWDLASSA 242 (406)
Q Consensus 190 ---------------~i~vwd~~~~~~~~~~~~~~~---------~i~~~~~s~~~---~~l~s~s~d~~i~iwd~~~~~ 242 (406)
.|..+|.++|+.+..+...+. ...-+....+| ..++.++.+|.++++|.++|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 599999999998876653211 12223333467 678889999999999999999
Q ss_pred eeeecccCCc----------ceE------------------------EEEEEEcCCCCceEEEEEEEc------------
Q 015490 243 VATPLAKEND----------ELF------------------------ASCRFSPLNNEDYVLYIAAIT------------ 276 (406)
Q Consensus 243 ~~~~~~~~~~----------~~~------------------------~~~~~~~~~~~~~~l~~~~~~------------ 276 (406)
.+..+..... ..+ ..++++|+... +|+....
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~---~yv~~~~~~~~~~~~~~~~ 425 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL---VYLPAQNVPVNLMDDKKWE 425 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE---EEEEEEECCCEEEECTTCC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE---EEEeChhcceeeecccccc
Confidence 8765432210 011 14678887763 3332220
Q ss_pred ----------------------------CCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 015490 277 ----------------------------DRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIID 328 (406)
Q Consensus 277 ----------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d 328 (406)
...+.|..||+.+++.+-.+... .++....+..++..+++++.||.+++||
T Consensus 426 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 426 FNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp TTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred cccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 01388999999999988877654 3344455667788999999999999999
Q ss_pred CCCceEEEEeecccccceEEEEEcCCCCeEEEE-EC----------------CCcEEEEEecC
Q 015490 329 SSSLQVRTAVKKAHLGIVTALAFSYDSRALVSA-SM----------------DSSVRVTVIED 374 (406)
Q Consensus 329 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-s~----------------dg~i~iw~~~~ 374 (406)
..+++.+..+..++.....-+.+..+|+.+++. +. .+.+.+|.+..
T Consensus 505 ~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 505 AATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 999999998874444444456777888755433 22 36788898874
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=5.7e-08 Score=83.69 Aligned_cols=206 Identities=11% Similarity=0.010 Sum_probs=128.7
Q ss_pred CcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe-CCCCEEEEEcCCCeeee
Q 015490 168 GQQLALTFDSEGTIFA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGRVWDLASSAVAT 245 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~ 245 (406)
..+..++|++++..|+ +-..++.|.+++...................+++++++..|+.+. ..+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 3567899999765555 445578999999876544332222224678999999766665554 56789999986433222
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-ecCCCeEEEEEcCCCCEEEEEeC-CCc
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-VVREPVSSFNVSADGKLLAVGTA-SGD 323 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~-dg~ 323 (406)
.... .......++++|++.. +|++-.....+.|..+++..... ..+. ..-.....++++|+++.|+.+.. .+.
T Consensus 116 ~~~~-~~~~P~~i~vd~~~g~---lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 116 LFDT-GLVNPRGIVTDPVRGN---LYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp EECS-SCSSEEEEEEETTTTE---EEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEC-CCCCccEEEEeeCCCE---EEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 2221 1234578999997664 44443222257888888764322 2221 22245789999998877766655 678
Q ss_pred EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 324 ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
|.++|.........+. . ......++.. ++..+++...++.|.++|..+++.+..+
T Consensus 191 I~~~~~~g~~~~~~~~-~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 191 AECLNPAQPGRRKVLE-G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EEEEETTEEEEEEEEE-C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCceEEEec-C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 9999997654433332 2 2334566654 3444444445689999999888765544
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=1.1e-11 Score=112.53 Aligned_cols=187 Identities=15% Similarity=0.047 Sum_probs=98.6
Q ss_pred CCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceE
Q 015490 124 HGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEII 202 (406)
Q Consensus 124 ~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~ 202 (406)
++..+++++ ++ .|+.|+..+++....+.. +.+.+..+..++..+++++.||.|+.||..+++.+
T Consensus 8 ~~~~v~~gs~dg--~v~a~d~~tG~~~W~~~~-------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTLDG--SLHAVSKRTGSIKWTLKE-------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEETTS--EEEEEETTTCCEEEEEEC-------------CCSCCCC-----CCEEECTTTCCEEEC-----CCS
T ss_pred eCCEEEEEcCCC--EEEEEECCCCCEEEEecC-------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCcee
Confidence 456677776 44 566677776766554322 22333344567778888889999999999888876
Q ss_pred eeeeccCC-cee-EEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCc
Q 015490 203 LNESEAHA-SVK-DLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGA 280 (406)
Q Consensus 203 ~~~~~~~~-~i~-~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 280 (406)
.....+.. .+. ...+. ++..+++++.++.++.||.++|+....+..+. ...++|++.. + ..++.++
T Consensus 73 w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~---v---~~~~~dg 140 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSL---L---YLGRTEY 140 (369)
T ss_dssp EECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------------------------------E---EEEEEEE
T ss_pred eeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCE---E---EEEecCC
Confidence 55432211 111 11111 34567788889999999999999877665432 2345565542 2 2335678
Q ss_pred EEEEEeCCCceEEEEeeecCCCeEEEEEcCCC---CEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 281 SIVTWNTTTWKRIRTKQVVREPVSSFNVSADG---KLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 281 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
.|+.||.++++.+..+..+. .....++++. ..+++++.+|.|+.||..+++.+....
T Consensus 141 ~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 141 TITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 99999999988765554321 1223344432 567778899999999999998877664
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=3.7e-08 Score=89.07 Aligned_cols=230 Identities=8% Similarity=0.036 Sum_probs=144.5
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEe-------cCCCCceEEEEccCCCeEEEEe-c----C
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELR-------TDSDLPYRMAIHPHGDGIICAL-Q----N 134 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~sp~~~~l~~~~-~----~ 134 (406)
...+++++.+.+.. .++.+|.......++...+++ ........+..+|+| .++++. + +
T Consensus 93 ~~r~~l~v~~l~s~---------~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVPGLRSS---------RIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEEBTTTC---------CEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCS
T ss_pred ccCCEEEEccCCCC---------eEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCC
Confidence 66778887765443 456666554433344455552 112245678889999 555443 3 2
Q ss_pred CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee-------------------CCCeEEEEe
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS-------------------ENGNLRVFK 195 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------------------~dg~i~vwd 195 (406)
...|..+|..+.+.+..+..... ....-..+.|+|+++.+++.. ...+|.+||
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~--------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D 234 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRG--------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD 234 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCT--------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred CCeEEEEECCCCeEEEEEccCCC--------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence 25677788876665555432100 012234578899999888874 368999999
Q ss_pred CCCcceEeeeeccC--CceeEEEE--ccCCCEEEEEe------CCCCEEEEEcCCCeee--ee--cccC-----------
Q 015490 196 WPSLEIILNESEAH--ASVKDLSF--SPDGKFLVSLG------NRGPGRVWDLASSAVA--TP--LAKE----------- 250 (406)
Q Consensus 196 ~~~~~~~~~~~~~~--~~i~~~~~--s~~~~~l~s~s------~d~~i~iwd~~~~~~~--~~--~~~~----------- 250 (406)
+.+++.+..+.... .....+.| +|+++++++++ .+++|.+|....++.. .. +...
T Consensus 235 ~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 235 LRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILK 314 (462)
T ss_dssp TTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGG
T ss_pred CCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccc
Confidence 99887777665532 24456656 99999888776 4567877665443211 11 0100
Q ss_pred ----CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC---CceEEEEeeecCC--------------CeEEEEEc
Q 015490 251 ----NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT---TWKRIRTKQVVRE--------------PVSSFNVS 309 (406)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~---~~~~~~~~~~~~~--------------~i~~~~~s 309 (406)
.......+.++++++. +.++....+.|.+||+. +.+.+..+..... ....+.++
T Consensus 315 ~f~~~~~~pa~I~lS~DGrf-----LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS 389 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDKF-----LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEIS 389 (462)
T ss_dssp GGTEECCCCCCEEECTTSCE-----EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEEC
T ss_pred ccccCCCceeEEEECCCCCE-----EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEc
Confidence 0123567899999995 45566677899999985 3455555544311 25789999
Q ss_pred CCCCEEEEEe
Q 015490 310 ADGKLLAVGT 319 (406)
Q Consensus 310 p~~~~l~~~~ 319 (406)
|||++|+++.
T Consensus 390 pDGk~LyVaN 399 (462)
T 2ece_A 390 RDGRRVYVTN 399 (462)
T ss_dssp TTSSEEEEEC
T ss_pred CCCCEEEEEc
Confidence 9999999988
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.13 E-value=2e-08 Score=98.45 Aligned_cols=185 Identities=16% Similarity=0.208 Sum_probs=126.4
Q ss_pred EEEECCCCCEEEEeeCCCe-------------------EEEEeCCCcceEeeeeccCC---------ceeEEEEccCCC-
Q 015490 172 ALTFDSEGTIFAAGSENGN-------------------LRVFKWPSLEIILNESEAHA---------SVKDLSFSPDGK- 222 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~---------~i~~~~~s~~~~- 222 (406)
.++++|++.+++.+..++. |..+|.++|+.+..+...+. .+.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788898888998887764 99999999998877654211 111122223565
Q ss_pred --EEEEEeCCCCEEEEEcCCCeeeeecccCCc--------------------------------------ceEEEEEEEc
Q 015490 223 --FLVSLGNRGPGRVWDLASSAVATPLAKEND--------------------------------------ELFASCRFSP 262 (406)
Q Consensus 223 --~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~ 262 (406)
.++.++.+|.++++|.++|+.+........ .....++|+|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 788899999999999999988743221110 0011267777
Q ss_pred CCCCceEEEEEEEc------------------------------------------CCCcEEEEEeCCCceEEEEeeecC
Q 015490 263 LNNEDYVLYIAAIT------------------------------------------DRGASIVTWNTTTWKRIRTKQVVR 300 (406)
Q Consensus 263 ~~~~~~~l~~~~~~------------------------------------------~~~~~i~~~d~~~~~~~~~~~~~~ 300 (406)
+... +|+.... ..++.|+.||+.+++.+-.+..+.
T Consensus 399 ~~~~---~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 475 (689)
T 1yiq_A 399 DTGL---VYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT 475 (689)
T ss_dssp TTTE---EEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS
T ss_pred CCCE---EEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC
Confidence 7662 3332110 014889999999999988877654
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEE
Q 015490 301 EPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVS 360 (406)
Q Consensus 301 ~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 360 (406)
+...-.+...+.++++++.||.++.||.++++.+..+..++.....-+.|..+|+..++
T Consensus 476 -~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 -IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp -SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred -CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 23333556678899999999999999999999998886444333345777888875443
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=5e-08 Score=81.84 Aligned_cols=191 Identities=13% Similarity=0.190 Sum_probs=131.6
Q ss_pred eeeccccc--CcEEEEEECCCCCEEEEeeCCC--eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe-CCCCEE
Q 015490 160 VLSQLENV--GQQLALTFDSEGTIFAAGSENG--NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGR 234 (406)
Q Consensus 160 ~~~~~~~~--~~v~~~~~s~~g~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~ 234 (406)
.++++.|. .....+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........+++..|.... .++.+.
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEE
Confidence 34444444 334788998 677777777766 89999999999887775433 344433333455666555 578999
Q ss_pred EEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-----CCeEEEEEc
Q 015490 235 VWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-----EPVSSFNVS 309 (406)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~i~~~~~s 309 (406)
+||..+.+.+.++..... ...+++++.. +..+ +..+.|.++|..+.+.+.++.... ..+..+.|.
T Consensus 111 v~D~~t~~~~~ti~~~~e----G~glt~dg~~-----L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGE----GWGLTHNDQY-----LIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEETTTCCEEEEEECSSC----CCCEEECSSC-----EEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEECccCcEEEEEECCCC----ceEEecCCCE-----EEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 999999999988875432 2344466765 2333 347889999999999888776532 334567776
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceEEEEeecc-c----------ccceEEEEEcCCCCeEEEEEC
Q 015490 310 ADGKLLAVGTASGDISIIDSSSLQVRTAVKKA-H----------LGIVTALAFSYDSRALVSASM 363 (406)
Q Consensus 310 p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~----------~~~v~~~~~sp~~~~l~s~s~ 363 (406)
+|+..+..-.++.|.+.|.++++.+..+... . ....+.|+|+|+++.|+..+.
T Consensus 181 -~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 -DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6765544445889999999999998888621 0 124579999998777766654
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=7.4e-08 Score=81.78 Aligned_cols=197 Identities=8% Similarity=-0.058 Sum_probs=132.9
Q ss_pred ceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEE
Q 015490 116 PYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVF 194 (406)
Q Consensus 116 v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vw 194 (406)
...++|+|++..+++.+ .+.-.|..+|..+++....+.+. .......+++.. +++.++.-.++.+.++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~----------~~~fgeGi~~~g-~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD----------DSYFGEGLTLLN-EKLYQVVWLKNIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC----------TTCCEEEEEEET-TEEEEEETTCSEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC----------CCcceEEEEEeC-CEEEEEEecCCEEEEE
Confidence 57999999864444433 34457777888877665554331 112223455542 2444455568899999
Q ss_pred eCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCc-c---eEEEEEEEcCCCCceEE
Q 015490 195 KWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKEND-E---LFASCRFSPLNNEDYVL 270 (406)
Q Consensus 195 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~l 270 (406)
|..+.+.+..+..... ....+++||+.++++..++.|.++|..+.+....+..... . ....+.|. ++. +
T Consensus 92 D~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~----l 164 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE----V 164 (266)
T ss_dssp ETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE----E
T ss_pred ECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE----E
Confidence 9999988887754312 1234566888777777788999999999888877664321 1 25567777 543 3
Q ss_pred EEEEEcCCCcEEEEEeCCCceEEEEeeecC-------------CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCc
Q 015490 271 YIAAITDRGASIVTWNTTTWKRIRTKQVVR-------------EPVSSFNVSADGKLLAVGT-ASGDISIIDSSSL 332 (406)
Q Consensus 271 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------------~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~ 332 (406)
.+....++.|.+.|..+++.+..+.... .....++|+|+++.+++++ ..+.+...++...
T Consensus 165 --yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 165 --WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp --EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred --EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 3444567899999999999988887531 3568999999987666555 5788888887643
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=3.5e-08 Score=92.35 Aligned_cols=233 Identities=14% Similarity=0.056 Sum_probs=143.7
Q ss_pred CCCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEe-cCCCCceEEEE-c-cCCCeEEEEecCCe-------
Q 015490 67 RRNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELR-TDSDLPYRMAI-H-PHGDGIICALQNSC------- 136 (406)
Q Consensus 67 ~~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-s-p~~~~l~~~~~~~~------- 136 (406)
+++++++++..... .+..+|.... +....+. .....+..+++ + |+++++++++...+
T Consensus 99 ~DG~~lfVnd~~~~---------rVavIdl~t~----~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 99 YDGRFLFMNDKANT---------RVARVRCDVM----KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEEETTTT---------EEEEEETTTT----EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cCCCEEEEEcCCCC---------EEEEEECCCc----eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 35566666543332 4555666542 2222222 12245788888 5 99999998852221
Q ss_pred ----------EEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCC-----------------
Q 015490 137 ----------RLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENG----------------- 189 (406)
Q Consensus 137 ----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg----------------- 189 (406)
.+-.+|..+.+...++.+ .+....++++|||+++++.+.+.
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~qI~V------------gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v 233 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQVLV------------SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHI 233 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEEEEE------------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEE
T ss_pred ccccccccCceEEEEECCCCeEEEEEEe------------CCCccceEECCCCCEEEEEecCcccCcchhhccccccceE
Confidence 444455554433333322 22345577899999888877543
Q ss_pred ---------------------eEEEEeCCC--cce-EeeeeccCCceeEEEEccCCCEEEEEe-CCCCEEEEEcCCCe--
Q 015490 190 ---------------------NLRVFKWPS--LEI-ILNESEAHASVKDLSFSPDGKFLVSLG-NRGPGRVWDLASSA-- 242 (406)
Q Consensus 190 ---------------------~i~vwd~~~--~~~-~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~-- 242 (406)
.|.|.|..+ ++. +..+... ....++.++|||+++++++ .+.+|.++|+.+.+
T Consensus 234 ~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~ 312 (595)
T 1fwx_A 234 VVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV 312 (595)
T ss_dssp EEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH
T ss_pred EEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc
Confidence 366666665 333 3333322 2467899999999888776 57799999998653
Q ss_pred ----------eeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC----------ceEEEEeeecCCC
Q 015490 243 ----------VATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT----------WKRIRTKQVVREP 302 (406)
Q Consensus 243 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~ 302 (406)
....+. .+.....++|+++| . +.++..-++.|..||+.+ .+.+.++..|-.+
T Consensus 313 ~~~~l~~~~~v~~~v~--vG~gP~h~aF~~dG-~-----aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 313 FYENADPRSAVVAEPE--LGLGPLHTAFDGRG-N-----AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp HHSCCCGGGGEEECCB--CCSCEEEEEECTTS-E-----EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred cccccCcccceEEEcC--CCCCcceEEECCCC-e-----EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 233333 23346789999999 5 334456789999999877 5567777665332
Q ss_pred e-----EEEEEcCCCCEEEEEeC---CCc----------EEEEECCCce
Q 015490 303 V-----SSFNVSADGKLLAVGTA---SGD----------ISIIDSSSLQ 333 (406)
Q Consensus 303 i-----~~~~~sp~~~~l~~~~~---dg~----------i~i~d~~~~~ 333 (406)
- ..+.++|||++|++... |+. -.++|+..++
T Consensus 385 Gh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 385 GHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 1 12245799999999875 332 2889996544
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.05 E-value=8.4e-07 Score=77.98 Aligned_cols=227 Identities=12% Similarity=0.059 Sum_probs=133.0
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC--CeE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN--GNL 191 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--g~i 191 (406)
.....++|+++++.+++.. ...+|+.++.... ... ..........+++.++|+++++.... ..|
T Consensus 32 ~~pegia~~~~g~lyv~d~-~~~~I~~~d~~g~-~~~------------~~~~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNH-EVGEIVSITPDGN-QQI------------HATVEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp CCEEEEEECTTSCEEEEET-TTTEEEEECTTCC-EEE------------EEECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeC-CCCeEEEECCCCc-eEE------------EEeCCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 4567899999988444432 3336777775432 111 11123467889999999966655332 247
Q ss_pred EEEeCCCcceEeeeecc-CCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee-eee--------cccCCcceEEEEEEE
Q 015490 192 RVFKWPSLEIILNESEA-HASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV-ATP--------LAKENDELFASCRFS 261 (406)
Q Consensus 192 ~vwd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~-~~~--------~~~~~~~~~~~~~~~ 261 (406)
..+|..+++........ ......++..+++..+++-..++.|..+|..+++. +.. .....-.....+ +
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 77777777653222211 12334555555554444444688899999876431 110 000111123445 7
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeCCC-ceE--EEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE--
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNTTT-WKR--IRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT-- 336 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~-- 336 (406)
++++. +.++....+.|..+|+.. ++. ...+... .....++++++|+++++....+.|.++|.. ++...
T Consensus 176 ~dg~~-----lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 176 RFGNF-----LYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp EETTE-----EEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred cCCCE-----EEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 88764 334456678999999864 321 1122111 235678999999877666667889999975 55432
Q ss_pred EeecccccceEEEEEc---CCCCeEEEEECC
Q 015490 337 AVKKAHLGIVTALAFS---YDSRALVSASMD 364 (406)
Q Consensus 337 ~~~~~~~~~v~~~~~s---p~~~~l~s~s~d 364 (406)
.+. .....+++++|. |+++.|+.++..
T Consensus 249 ~~~-~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 249 QAE-QGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CGG-GTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ecc-cccCCceEEEEecccCCCCEEEEECCC
Confidence 222 223458899998 887777665543
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=8.5e-08 Score=80.42 Aligned_cols=188 Identities=16% Similarity=0.212 Sum_probs=128.5
Q ss_pred eeeeccccc--CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeE--EEEccCCCEEEE-EeCCCCE
Q 015490 159 KVLSQLENV--GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKD--LSFSPDGKFLVS-LGNRGPG 233 (406)
Q Consensus 159 ~~~~~~~~~--~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~--~~~s~~~~~l~s-~s~d~~i 233 (406)
+.+.++.+. .....+.|+ ++.++.+.+.+|.|+++|+++++.+..+ - ...... +++ ++..|.. .-.++.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~--~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLAS--DGERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEE--CSSCEEEEESSSCEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEE--eCCEEEEEEccCCEE
Confidence 344555454 334788887 4677777788899999999999988777 2 223333 555 4444444 4468899
Q ss_pred EEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-----CCeEEEEE
Q 015490 234 RVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-----EPVSSFNV 308 (406)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~i~~~~~ 308 (406)
.+||..+.+.+.++...... ..++++++. +..+ +.++.|.++|..+.+.+.++.... ..+..+.|
T Consensus 119 ~V~D~~Tl~~~~ti~~~~eG----wGLt~Dg~~-----L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGEG----WGLCYWNGK-----LVRS-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp EEEETTTTEEEEEEECSSCC----CCEEEETTE-----EEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEECCcCcEEEEEeCCCce----eEEecCCCE-----EEEE-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 99999999999888754322 233356664 2333 358899999999999888776532 24566777
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCceEEEEeecc------------cccceEEEEEcCCCCeEEEEE
Q 015490 309 SADGKLLAVGTASGDISIIDSSSLQVRTAVKKA------------HLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 309 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~sp~~~~l~s~s 362 (406)
. +|+..+..-.++.|.+.|.++++.+..+... ...-.+.|+++|+++.|+..+
T Consensus 189 ~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 189 A-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp E-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred e-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7 6754444445889999999999998887621 112467999999766555444
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.04 E-value=3.5e-07 Score=82.89 Aligned_cols=227 Identities=9% Similarity=0.057 Sum_probs=139.2
Q ss_pred CCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEe
Q 015490 124 HGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIIL 203 (406)
Q Consensus 124 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~ 203 (406)
++..+++++.. ..|+.++..+++........ ... ...+ .. .+..+++++.++.|..+|..+++.+.
T Consensus 102 ~~~~v~v~~~~-g~l~a~d~~tG~~~W~~~~~--~~~-----~~~p----~~--~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 102 SGGHVYIGSEK-AQVYALNTSDGTVAWQTKVA--GEA-----LSRP----VV--SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp ETTEEEEEETT-SEEEEEETTTCCEEEEEECS--SCC-----CSCC----EE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred eCCEEEEEcCC-CEEEEEECCCCCEEEEEeCC--Cce-----EcCC----EE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 34556666522 26677787777665544331 000 0011 11 13467788889999999999998876
Q ss_pred eeeccCCce-----eEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcce---------E-EEEEEEcCCCCce
Q 015490 204 NESEAHASV-----KDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDEL---------F-ASCRFSPLNNEDY 268 (406)
Q Consensus 204 ~~~~~~~~i-----~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~ 268 (406)
......... ...... +..++.++.++.+..+|..+++............ + ...... +..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~-- 241 (376)
T 3q7m_A 168 TVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGV-- 241 (376)
T ss_dssp EEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTE--
T ss_pred EEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCE--
Confidence 654432211 222222 3467778889999999999998776554321100 0 001111 221
Q ss_pred EEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEE
Q 015490 269 VLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 269 ~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
+ ..+..++.+..+|..+++.+..... .....+.. ++..+++++.++.|..+|..+++.+..........+..
T Consensus 242 -v---~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 242 -V---FALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTS 313 (376)
T ss_dssp -E---EEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCC
T ss_pred -E---EEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccC
Confidence 2 2235678999999999988766543 23444444 36678888889999999999999876654112222333
Q ss_pred EEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 349 LAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 349 ~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
.... +..|+.++.+|.|+.+|..+++.+..
T Consensus 314 ~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 314 PVLY--NGNLVVGDSEGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp CEEE--TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CEEE--CCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3332 45788888999999999999886543
No 243
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.99 E-value=9.9e-07 Score=73.37 Aligned_cols=191 Identities=16% Similarity=0.191 Sum_probs=129.2
Q ss_pred eeeeccccc--CcEEEEEECCCCCEEEEeeCC--CeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCE
Q 015490 159 KVLSQLENV--GQQLALTFDSEGTIFAAGSEN--GNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPG 233 (406)
Q Consensus 159 ~~~~~~~~~--~~v~~~~~s~~g~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i 233 (406)
+.+.++.|. .....+.|++ +.++.+.+.+ ..|+.+|+.+++....+.-... ........++..|... -.++.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEE
Confidence 344555554 4567899986 5666666664 4899999999998877654333 2333233334555544 468899
Q ss_pred EEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-----CCeEEEEE
Q 015490 234 RVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-----EPVSSFNV 308 (406)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~i~~~~~ 308 (406)
.+||..+.+.+.++...... ..+.+++.. +..+ +.++.|.++|..+.+.+.++.... ..+..+.+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G----wglt~dg~~-----L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG----WALTSDDSH-----LYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC----CEEEECSSC-----EEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EEEECCcCcEEEEEeCCCCc----eEEeeCCCE-----EEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 99999999999888754332 233466665 3333 348899999999999888776532 34566776
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCceEEEEeecc------------cccceEEEEEcCCCCeEEEEE
Q 015490 309 SADGKLLAVGTASGDISIIDSSSLQVRTAVKKA------------HLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 309 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~sp~~~~l~s~s 362 (406)
. +|+..+..-.+..|.+.|..+++.+..+... ...-.+.|+++|+++.|...+
T Consensus 158 ~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 158 V-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp E-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred e-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5 6665544445789999999999998887622 112457999999876665554
No 244
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=1.3e-06 Score=73.76 Aligned_cols=203 Identities=7% Similarity=0.129 Sum_probs=135.1
Q ss_pred EecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN 188 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 188 (406)
+.+-.+.+..++|+|++..|++..+...+|+.++.. ++..+.+.+ .+....-.+++.+++.++++.-.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l----------~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL----------DFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC----------SSCSSEEEEEECSTTEEEEEETTT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec----------CCCCChHHeEEeCCCEEEEEECCC
Confidence 334556789999999998898888778899999986 444443322 233567788999998877766567
Q ss_pred CeEEEEeCCCcce---Eeeee------ccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCC---Ceeeeecc------cC
Q 015490 189 GNLRVFKWPSLEI---ILNES------EAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLAS---SAVATPLA------KE 250 (406)
Q Consensus 189 g~i~vwd~~~~~~---~~~~~------~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~---~~~~~~~~------~~ 250 (406)
+.+.++++..... +.... ........++|+|+++.|+++.......+|.+.. ......+. ..
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 8899998765432 11111 1122568999999998888877666666666541 11111110 01
Q ss_pred CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC---------CCeEEEEEcCCCCEEEEEeCC
Q 015490 251 NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR---------EPVSSFNVSADGKLLAVGTAS 321 (406)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~i~~~~~sp~~~~l~~~~~d 321 (406)
.-..+..++++|...+ +.+.......|..+|... +.+..+.... .....|+|.++|+ |++.++-
T Consensus 171 ~~~d~S~l~~dp~tg~-----lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~ 243 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNT-----LLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP 243 (255)
T ss_dssp CSSCCCEEEEETTTTE-----EEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT
T ss_pred ccCCceeEEEcCCCCe-----EEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC
Confidence 1223578999998875 334457789999999774 5666555442 2568999999998 5555777
Q ss_pred CcEEEEEC
Q 015490 322 GDISIIDS 329 (406)
Q Consensus 322 g~i~i~d~ 329 (406)
+.++.|.-
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 77777754
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=8.1e-07 Score=78.69 Aligned_cols=249 Identities=10% Similarity=0.058 Sum_probs=143.4
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceecccee---------eecccccCcEEEEEECC-CCCEEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKV---------LSQLENVGQQLALTFDS-EGTIFA 183 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~s~-~g~~l~ 183 (406)
....+++|.+++..++++..+ .+|+.++..... ...+........ .........+..+++.+ +|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~-~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~- 95 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD-GRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY- 95 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT-SEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE-
T ss_pred CCceEEEEcCCCCEEEEEcCC-CeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE-
Confidence 456788999998867766432 367777654322 111110000000 00001123578899998 66544
Q ss_pred EeeCCCeEEEEeCCCcceEeeeec-----cCCceeEEEEcc-CCCEEEEEeC-----------------CCCEEEEEcCC
Q 015490 184 AGSENGNLRVFKWPSLEIILNESE-----AHASVKDLSFSP-DGKFLVSLGN-----------------RGPGRVWDLAS 240 (406)
Q Consensus 184 ~~~~dg~i~vwd~~~~~~~~~~~~-----~~~~i~~~~~s~-~~~~l~s~s~-----------------d~~i~iwd~~~ 240 (406)
++...+.|..+|..++... .+.. .......+++.+ +|+..++... ++.|..||..+
T Consensus 96 v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 4444455888887665422 1211 112468899999 9986665432 36688888876
Q ss_pred CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce--EEEEeeecCCCeEEEEEcCCCCEEEEE
Q 015490 241 SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK--RIRTKQVVREPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~ 318 (406)
++....... ......++++++++. +| ++....+.|..|++.... ....+....+ ...++++++|++.++.
T Consensus 175 ~~~~~~~~~--~~~p~gia~~~dg~~---ly--v~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 175 KETTLLLKE--LHVPGGAEVSADSSF---VL--VAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp TEEEEEEEE--ESCCCEEEECTTSSE---EE--EEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred CEEEEeccC--CccCcceEECCCCCE---EE--EEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 654332211 112346899999874 33 333456889999987421 1112211223 7889999999866665
Q ss_pred eC----------CCcEEEEECCCceEEEEeeccc---ccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 319 TA----------SGDISIIDSSSLQVRTAVKKAH---LGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 319 ~~----------dg~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
.. .+.|..+|.. ++.+..+.... ...+..+++ .+++++++...++.|..+++....
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred cCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 44 4668888874 66666664221 234666766 466666666678889999986543
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=2.9e-06 Score=76.82 Aligned_cols=221 Identities=14% Similarity=0.143 Sum_probs=131.3
Q ss_pred CeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeee
Q 015490 126 DGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNE 205 (406)
Q Consensus 126 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~ 205 (406)
..++++.. ...|+.++..+++........ .... ...... .... .+..++++..++.+..+|..+++.....
T Consensus 144 ~~v~v~~~-~g~l~~~d~~tG~~~W~~~~~--~~~~-~~~~~~---~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 144 GLVLIHTS-NGQLQALNEADGAVKWTVNLD--MPSL-SLRGES---APTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp TEEEEECT-TSEEEEEETTTCCEEEEEECC--C------CCCC---CCEE--ETTEEEECCTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEcC-CCeEEEEECCCCcEEEEEeCC--CCce-eecCCC---CcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 35555542 226777787777666554331 0000 000000 1111 1346778888999999999999887665
Q ss_pred eccCC-------ceeEEEEcc--CCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEc
Q 015490 206 SEAHA-------SVKDLSFSP--DGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAIT 276 (406)
Q Consensus 206 ~~~~~-------~i~~~~~s~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (406)
..... .+..+.-.| .+..++.++.++.+..+|.++++......... ...+... +.. +++ +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~---~~~~~~~--~~~---l~~---~ 283 (376)
T 3q7m_A 215 RISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS---VNDFIVD--GNR---IYL---V 283 (376)
T ss_dssp ECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC---EEEEEEE--TTE---EEE---E
T ss_pred ecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC---CCCceEE--CCE---EEE---E
Confidence 43211 000011111 24578888889999999999998776554321 2233332 332 222 2
Q ss_pred CCCcEEEEEeCCCceEEEEeee-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceE-EEEEcCC
Q 015490 277 DRGASIVTWNTTTWKRIRTKQV-VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVT-ALAFSYD 354 (406)
Q Consensus 277 ~~~~~i~~~d~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~sp~ 354 (406)
..++.|..+|..+++.+..... ....+..... .+..|++++.+|.+.++|..+++.+.... .....+. .....
T Consensus 284 ~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~-~~~~~~~~~~~~~-- 358 (376)
T 3q7m_A 284 DQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQK-VDSSGFQTEPVAA-- 358 (376)
T ss_dssp ETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE-CCTTCBCSCCEEE--
T ss_pred cCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEe-cCCCcceeCCEEE--
Confidence 3578899999999988766552 2222223333 25688889999999999999999887765 2223332 22222
Q ss_pred CCeEEEEECCCcEEEEE
Q 015490 355 SRALVSASMDSSVRVTV 371 (406)
Q Consensus 355 ~~~l~s~s~dg~i~iw~ 371 (406)
+..|+.++.+|.|+.|+
T Consensus 359 ~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 359 DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEe
Confidence 45678889999999987
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.1e-06 Score=85.96 Aligned_cols=242 Identities=11% Similarity=0.071 Sum_probs=150.2
Q ss_pred CCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEECCCCCEEEEeeC------CCeEEEEeCC
Q 015490 125 GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTFDSEGTIFAAGSE------NGNLRVFKWP 197 (406)
Q Consensus 125 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~------dg~i~vwd~~ 197 (406)
+..+++++ .+.+|+-+|..+++............ ..... .++. .++ .++++.. +|.|..+|..
T Consensus 117 ~~~v~v~~-~dg~l~alD~~tG~~~W~~~~~~~~~---~~~~~~~P~v-----~~~-~v~vg~~~~~~~~~g~v~a~D~~ 186 (668)
T 1kv9_A 117 GDKVYVGT-LDGRLIALDAKTGKAIWSQQTTDPAK---PYSITGAPRV-----VKG-KVIIGNGGAEYGVRGFVSAYDAD 186 (668)
T ss_dssp BTEEEEEC-TTSEEEEEETTTCCEEEEEECSCTTS---SCBCCSCCEE-----ETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEeeeeccCCCCC---cceecCCCEE-----ECC-EEEEeCCCCCcCCCCEEEEEECC
Confidence 44566554 22367778888887776654310000 00001 1111 133 4555433 5899999999
Q ss_pred CcceEeeeeccCC-------------------------------ceeEEEEccCCCEEEEEeCCC---------------
Q 015490 198 SLEIILNESEAHA-------------------------------SVKDLSFSPDGKFLVSLGNRG--------------- 231 (406)
Q Consensus 198 ~~~~~~~~~~~~~-------------------------------~i~~~~~s~~~~~l~s~s~d~--------------- 231 (406)
+|+.+..+..... ....+++.|+...++.++.++
T Consensus 187 tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~ 266 (668)
T 1kv9_A 187 TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDN 266 (668)
T ss_dssp TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred CCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 9998776542100 112468888888888887665
Q ss_pred ----CEEEEEcCCCeeeeecccCC-c-------ceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec
Q 015490 232 ----PGRVWDLASSAVATPLAKEN-D-------ELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV 299 (406)
Q Consensus 232 ----~i~iwd~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 299 (406)
.|..+|.++|+..-.+...+ . .......+..+++. .-+++.++.+|.++++|..+++.+......
T Consensus 267 l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~---~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 343 (668)
T 1kv9_A 267 LYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP---RKVLMQAPKNGFFYVLDRTNGKLISAEKFG 343 (668)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE---EEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred eeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE---EEEEEEECCCCEEEEEECCCCCEecccccc
Confidence 39999999999876665321 1 11222233335542 113556788999999999999987543322
Q ss_pred CC------------C------------------------eEEEEEcCCCCEEEEEe------------------------
Q 015490 300 RE------------P------------------------VSSFNVSADGKLLAVGT------------------------ 319 (406)
Q Consensus 300 ~~------------~------------------------i~~~~~sp~~~~l~~~~------------------------ 319 (406)
.. + -..++++|+...+++..
T Consensus 344 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~ 423 (668)
T 1kv9_A 344 KVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAA 423 (668)
T ss_dssp CCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSS
T ss_pred ccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCc
Confidence 10 0 01267788777666421
Q ss_pred ------------CCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 320 ------------ASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 320 ------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.+|.|..||+.+++.+-... +..+.....+...+.+++.++.|+.|+.||.++++.+..+
T Consensus 424 ~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 424 GFADATDVPAAVVSGALLAWDPVKQKAAWKVP--YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CGGGCCCCCGGGCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCCCCCCCccceEEEEeCCCCcEEEEcc--CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 23789999999999887775 2333443444556778889999999999999999876554
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.93 E-value=2.1e-08 Score=89.16 Aligned_cols=227 Identities=14% Similarity=0.073 Sum_probs=140.3
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
..+.++...+++. +.++..+ |+.++. +++........ ........+. +..+..++.++.|..
T Consensus 60 ~~~~~~~~~~~g~-l~v~t~~---l~~~d~-~g~~~~~~~~~-----------~~~~~~~~~~--~~~l~v~t~~~~l~~ 121 (330)
T 3hxj_A 60 IIECRPSIGKDGT-IYFGSDK---VYAINP-DGTEKWRFDTK-----------KAIVSDFTIF--EDILYVTSMDGHLYA 121 (330)
T ss_dssp EEEECCEETTTTE-ECCSSCE---EEEECC-CGGGGGGSCC----------------CCEEEE--TTEEEEECTTSEEEE
T ss_pred CcccceEEecCCc-EEEecCc---EEEECC-CCcEEEEEECC-----------CCcccCceEE--CCEEEEEecCCEEEE
Confidence 3456667766665 4444433 666664 34433332211 0111112222 445777888899999
Q ss_pred EeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEE
Q 015490 194 FKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIA 273 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (406)
+|.. ++...........+.++...+++. +..++.++.+..+|.. ++....+... ...+.++...+++. + ++
T Consensus 122 ~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~-~~~~~~~~~d~~g~----l-~v 192 (330)
T 3hxj_A 122 INTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN-DAITSAASIGKDGT----I-YF 192 (330)
T ss_dssp ECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS-SCCCSCCEECTTCC----E-EE
T ss_pred EcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC-CCceeeeEEcCCCE----E-EE
Confidence 9988 776655554444567777777776 6667888999999998 7665554432 22344555656665 2 22
Q ss_pred EEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcC
Q 015490 274 AITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSY 353 (406)
Q Consensus 274 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp 353 (406)
+ . +.|..+| .+++...........+.++..+++|. |.+++.++.+..+|. +++....+. .....+..+...+
T Consensus 193 ~--t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~-~~~~~~~~~~~~~ 264 (330)
T 3hxj_A 193 G--S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFK-TGKRIESSPVIGN 264 (330)
T ss_dssp E--S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEE-CSSCCCSCCEECT
T ss_pred E--e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEee-CCCCccccceEcC
Confidence 2 2 7789999 67777666665556678888888875 555667788888874 556555554 2333344566666
Q ss_pred CCCeEEEEECCCcEEEEEecCCcC
Q 015490 354 DSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 354 ~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++. |..++.+|.|..+|. +++.
T Consensus 265 ~g~-l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 265 TDT-IYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp TSC-EEEECTTCEEEEECT-TSCE
T ss_pred CCe-EEEecCCCCEEEECC-CCcE
Confidence 664 666778888888884 5543
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.91 E-value=2e-07 Score=82.68 Aligned_cols=188 Identities=9% Similarity=-0.012 Sum_probs=123.7
Q ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc
Q 015490 170 QLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK 249 (406)
Q Consensus 170 v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 249 (406)
+.++...+++. +..++.++.|..+|.. ++...........+.++...+++... .++ +.+..+| .+++.......
T Consensus 139 ~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~ 212 (330)
T 3hxj_A 139 YATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYA 212 (330)
T ss_dssp CSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECC
T ss_pred eeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEcc
Confidence 44556666776 5567778999999988 77666665555567778887787744 444 7899999 67766655443
Q ss_pred CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 015490 250 ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDS 329 (406)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~ 329 (406)
. ...+.++...+++. + +++ ..++.|..+|. +++.+..+......+.++.+.+++ .|.+++.+|.|..+|.
T Consensus 213 ~-~~~~~~~~~~~~g~----l-~v~--t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 213 G-YWTVTRPAISEDGT----I-YVT--SLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp S-SCCCSCCEECTTSC----E-EEE--ETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred C-CcceeceEECCCCe----E-EEE--cCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 2 23355667777765 2 222 34677888885 455555555444444556666666 4667788888999996
Q ss_pred CCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 330 SSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 330 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
+++....+. .....+.++...++|+ |..++.+|.+++...+..+
T Consensus 283 -~g~~~~~~~-~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 283 -DGTEKWNFE-TGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp -TSCEEEEEE-CSSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred -CCcEEEEEE-cCCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 677666654 3445577778878876 5568899999988776544
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=5.2e-07 Score=75.71 Aligned_cols=192 Identities=10% Similarity=-0.015 Sum_probs=125.0
Q ss_pred ceeEEecCCCCc--eEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCE
Q 015490 105 PVAELRTDSDLP--YRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTI 181 (406)
Q Consensus 105 ~~~~~~~h~~~v--~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 181 (406)
.+.++ .|.... ..+.|+ ++..+.+++ ++.-.|..+|..+++....+.+. ....-..+++ +++.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~----------~~~FgeGit~--~g~~ 98 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG----------KRYFGEGISD--WKDK 98 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----------TTCCEEEEEE--ETTE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----------CccceeEEEE--eCCE
Confidence 34444 555544 788998 665444444 55557777888877665554331 1111122333 3434
Q ss_pred EE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCC-c---ceEE
Q 015490 182 FA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKEN-D---ELFA 256 (406)
Q Consensus 182 l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-~---~~~~ 256 (406)
|. ..-.++.+.+||..+.+.+..+..... ...+++|++.|+.+..++.|.++|..+.+....+.... + ..+.
T Consensus 99 ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 99 IVGLTWKNGLGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred EEEEEeeCCEEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 44 445688999999999998887765332 23334577777777667789999999988887765421 1 1234
Q ss_pred EEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec------------CCCeEEEEEcCCCCEEEEEeC
Q 015490 257 SCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV------------REPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 257 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~i~~~~~sp~~~~l~~~~~ 320 (406)
.+.|. ++. +.+..-.+..|.+.|.++++.+..+... ......++|+|+++.|++.+.
T Consensus 176 ELe~~-~G~------lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 176 ELEWV-DGE------IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEE-TTE------EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eeEEE-CCE------EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 56676 443 3345566789999999999998888753 135689999998887777665
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.88 E-value=3.8e-06 Score=75.20 Aligned_cols=243 Identities=12% Similarity=-0.003 Sum_probs=143.5
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEE-EeeCCCeE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFA-AGSENGNL 191 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~dg~i 191 (406)
.+..+|.+..+ ..+|+.+.... |+.++..... ..........+..++|++.+..|+ +-...+.|
T Consensus 33 ~d~~~C~~~~~-~~~ll~~~~~~--I~~i~~~g~~------------~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I 97 (349)
T 3v64_C 33 PDRRSCKALGP-EPVLLFANRID--IRQVLPHRSE------------YTLLLNNLENAIALDFHHRRELVFWSDVTLDRI 97 (349)
T ss_dssp TTSSCEEESSS-CCEEEEECBSC--EEEECTTSCC------------EEEEECSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCccccccc-CceeEeecccc--eEEEeCCCCe------------eEEeecCCCceEEEEEeccccEEEEEeccCCce
Confidence 44456666666 34555554554 4444443211 111122335578999997655554 44567889
Q ss_pred EEEeCCCcceEeeeeccCCceeEEEEccCCCEEEE-EeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEE
Q 015490 192 RVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVS-LGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVL 270 (406)
Q Consensus 192 ~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s-~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (406)
..+++..................+++.+.+..|+. -...+.|.+.++........+. ........+++.|.+.. +
T Consensus 98 ~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~l~~P~~iavdp~~g~---l 173 (349)
T 3v64_C 98 LRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGT---I 173 (349)
T ss_dssp EEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TTCSCEEEEEEETTTTE---E
T ss_pred EEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CCCCCcceEEEecCcCe---E
Confidence 99998766543333323335678999876555544 4556789999986543322222 22234578999997764 4
Q ss_pred EEEEEcCCC-cEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCceEEEEeecccccceEE
Q 015490 271 YIAAITDRG-ASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGDISIIDSSSLQVRTAVKKAHLGIVTA 348 (406)
Q Consensus 271 ~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 348 (406)
|++- ... +.|..+++............-.....++++|++..|+.+.. .+.|..+|+........+. ........
T Consensus 174 y~td--~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~g 250 (349)
T 3v64_C 174 YWTD--WGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFA 250 (349)
T ss_dssp EEEE--CSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEE
T ss_pred EEec--cCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe-CCCCCceE
Confidence 4433 334 88999988753322222222345689999997777776654 6789999987543332232 23345677
Q ss_pred EEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 349 LAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 349 ~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
+++ ..+..+++-...+.|...+..+++..
T Consensus 251 iav-~~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 251 ITV-FEDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEE-ECCEEEEecCCCCeEEEEEccCCCcc
Confidence 887 34555555556777888875566543
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.86 E-value=4.1e-06 Score=81.80 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=137.8
Q ss_pred CeEEEEEecccccceeecceecccee-------e----ecc---------cccCcEEEEEECCCCCEEEEeeCCC-----
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEKV-------L----SQL---------ENVGQQLALTFDSEGTIFAAGSENG----- 189 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~-------~----~~~---------~~~~~v~~~~~s~~g~~l~~~~~dg----- 189 (406)
...|+-+|..+++....+...+.... + ... .+......+++.++..+++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 35788888888887776543211000 0 000 0111123468888888888887665
Q ss_pred --------------eEEEEeCCCcceEeeeeccC---------CceeEEEEccCCC---EEEEEeCCCCEEEEEcCCCee
Q 015490 190 --------------NLRVFKWPSLEIILNESEAH---------ASVKDLSFSPDGK---FLVSLGNRGPGRVWDLASSAV 243 (406)
Q Consensus 190 --------------~i~vwd~~~~~~~~~~~~~~---------~~i~~~~~s~~~~---~l~s~s~d~~i~iwd~~~~~~ 243 (406)
.|..+|.++|+.+..+...+ .+.....+..+|+ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 49999999999887765431 1222223334665 688899999999999999988
Q ss_pred eeecccCC-----------cce------------------------EEEEEEEcCCCCceEEEEEEE-------------
Q 015490 244 ATPLAKEN-----------DEL------------------------FASCRFSPLNNEDYVLYIAAI------------- 275 (406)
Q Consensus 244 ~~~~~~~~-----------~~~------------------------~~~~~~~~~~~~~~~l~~~~~------------- 275 (406)
+....... ..+ ...++++|+... +|+-..
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~---~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGL---VYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTE---EEEEEEECCEEECCCGGGC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCE---EEEeccccceEeeeecccc
Confidence 74322111 000 012567776552 332111
Q ss_pred --------------------cCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEE
Q 015490 276 --------------------TDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVR 335 (406)
Q Consensus 276 --------------------~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~ 335 (406)
...++.|..||+.+++.+-+...+. ......+...+.++++++.|+.++.||.++++.+
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 1134889999999999887776543 2333344456789999999999999999999999
Q ss_pred EEeecccccceEEEEEcCCCC-eEEEEE
Q 015490 336 TAVKKAHLGIVTALAFSYDSR-ALVSAS 362 (406)
Q Consensus 336 ~~~~~~~~~~v~~~~~sp~~~-~l~s~s 362 (406)
..+.........-+.+..+|+ +++.++
T Consensus 493 ~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 493 WQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEecCCCCcccCceEEEECCEEEEEEEe
Confidence 888632211112344455676 444443
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.85 E-value=3.2e-06 Score=76.80 Aligned_cols=207 Identities=12% Similarity=0.016 Sum_probs=127.9
Q ss_pred ccCcEEEEEECCCCCE-EEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCCCee
Q 015490 166 NVGQQLALTFDSEGTI-FAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLASSAV 243 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~ 243 (406)
.......++|.+.+.. +++-...+.|+.++++.......+.........+++.+.+..|+.+ ...+.|.+.++.....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 3356789999975544 4454567889999987665433333233356788998765555544 4567888888864433
Q ss_pred eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CC
Q 015490 244 ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SG 322 (406)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg 322 (406)
...+. ........+++.|.+.. +|++-. ...+.|..+++............-.....++++|++..|+.+.. .+
T Consensus 194 ~~l~~-~~l~~P~giavdp~~g~---ly~td~-~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 194 KVLLW-QSLEKPRAIALHPMEGT---IYWTDW-GNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp EEEEC-SSCSCEEEEEEETTTTE---EEEEEC-SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTT
T ss_pred EEeec-CCCCCCcEEEEEcCCCe---EEEecc-CCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCC
Confidence 22222 22234578999988774 444332 22378999988754333222222345689999987777776654 67
Q ss_pred cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 323 DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 323 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
.|..+|+........+. ........+++ ..+..+++-...+.|..++..+++...
T Consensus 269 ~I~~~d~dG~~~~~~~~-~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 269 VIERANLDGSHRKAVIS-QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEEEECTTSCSCEEEEC-SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEEeCCCCeeEEEEE-CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceE
Confidence 89999987543332332 23345677888 345555666667788888866665443
No 254
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=5.1e-06 Score=76.56 Aligned_cols=238 Identities=9% Similarity=0.035 Sum_probs=137.4
Q ss_pred CceEEEEcc-CCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeC-CC---
Q 015490 115 LPYRMAIHP-HGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSE-NG--- 189 (406)
Q Consensus 115 ~v~~~~~sp-~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg--- 189 (406)
.+..|+++| ++..|+++..+ .+|+.++....... ...........++|+++|+.|+++.. ++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~------------~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVS------------TVYSGLSKVRTICWTHEADSMIITNDQNNNDR 204 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEE------------EEECCCSCEEEEEECTTSSEEEEEECCSCTTS
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEE------------EEecCCCCcceEEEeCCCCEEEEEeCCCCccc
Confidence 567889998 45666666533 57777776432211 11113356789999999996666544 11
Q ss_pred -eEEEEeCCCcceE--eeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCC
Q 015490 190 -NLRVFKWPSLEII--LNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNN 265 (406)
Q Consensus 190 -~i~vwd~~~~~~~--~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (406)
.+.+++. .+... ..+. .......++++| ++.++++-..++.|..++..++................++|+|+++
T Consensus 205 ~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 205 PNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp EEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSS
T ss_pred ceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCC
Confidence 3444443 33221 1222 223467899999 6766666667788999999876642222222223456899999998
Q ss_pred CceEEEEEEEcCCCcEEEEEeCCC--ceE--EEEeeec---------------CCCeE-EEEEc--------CCCCEEEE
Q 015490 266 EDYVLYIAAITDRGASIVTWNTTT--WKR--IRTKQVV---------------REPVS-SFNVS--------ADGKLLAV 317 (406)
Q Consensus 266 ~~~~l~~~~~~~~~~~i~~~d~~~--~~~--~~~~~~~---------------~~~i~-~~~~s--------p~~~~l~~ 317 (406)
. +..+....+.|..++... ++. ...+.+. -.... .++.. ++|.+.++
T Consensus 283 ~-----lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva 357 (430)
T 3tc9_A 283 Y-----AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC 357 (430)
T ss_dssp E-----EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred E-----EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE
Confidence 4 334445678888877642 221 1222211 01123 45543 34555555
Q ss_pred EeCCCcEEEEECCCceEEEEeecc---c----c---------cceEEEEEcCC-CCeEEEEECCCcEEEEEec
Q 015490 318 GTASGDISIIDSSSLQVRTAVKKA---H----L---------GIVTALAFSYD-SRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~~~~---~----~---------~~v~~~~~sp~-~~~l~s~s~dg~i~iw~~~ 373 (406)
-...+.|+.++. ++......-.+ . . .....++++|+ +.++++-..++.|+.++++
T Consensus 358 D~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 358 DRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 455678898884 45544333210 0 1 14789999994 6666666667888888765
No 255
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.82 E-value=3.8e-07 Score=90.42 Aligned_cols=196 Identities=10% Similarity=0.014 Sum_probs=112.0
Q ss_pred CceEEEEc-cCCCeEEEEec--C--CeEEEEEecccc-cceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC
Q 015490 115 LPYRMAIH-PHGDGIICALQ--N--SCRLFEWDEVEN-TEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN 188 (406)
Q Consensus 115 ~v~~~~~s-p~~~~l~~~~~--~--~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 188 (406)
.+...+|| |||++|+.+.+ + ...||.++..++ +.... .+. .....++|+|||+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----------~~~--~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----------KVS--GTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----------CEE--EECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----------ccc--CceeeEEEecCCCEEEEEEEC
Confidence 67889999 99999987753 2 246888887765 32110 000 112367899999888877665
Q ss_pred -----CeEEEEeCCCcce--Eeeeec-cCCceeEEEEccCCCEEEEEeC---CCCEEEEEcCCCe-ee--eecccCCcce
Q 015490 189 -----GNLRVFKWPSLEI--ILNESE-AHASVKDLSFSPDGKFLVSLGN---RGPGRVWDLASSA-VA--TPLAKENDEL 254 (406)
Q Consensus 189 -----g~i~vwd~~~~~~--~~~~~~-~~~~i~~~~~s~~~~~l~s~s~---d~~i~iwd~~~~~-~~--~~~~~~~~~~ 254 (406)
..|+++++.++.. ...+.. .......+.|+|||++|+..+. ...|+++|+.++. .. ..+.......
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 3688888877642 222222 2234567899999998887653 3458888987752 22 3333333333
Q ss_pred EEEEEEEcCCCCceEEEEEEEcC--CCcEEEEEeCCCceEEEE-eeecCC--CeEEEEEcCCCCEE-EEEeCCCc--EEE
Q 015490 255 FASCRFSPLNNEDYVLYIAAITD--RGASIVTWNTTTWKRIRT-KQVVRE--PVSSFNVSADGKLL-AVGTASGD--ISI 326 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~--~~~~i~~~d~~~~~~~~~-~~~~~~--~i~~~~~sp~~~~l-~~~~~dg~--i~i 326 (406)
..++.|+. +.. +++....+ ....|..+|+.+...... +..+.. .+..+.+. ++.| ++...++. |.+
T Consensus 322 ~~s~~~~~-g~~---l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 322 RYDVQMHG-TSH---LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp CEEEEEET-TTE---EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEE
T ss_pred eEEEeeee-CCE---EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEE
Confidence 34444433 443 33333221 346888888875311122 222332 34455554 4444 45555665 566
Q ss_pred EEC
Q 015490 327 IDS 329 (406)
Q Consensus 327 ~d~ 329 (406)
+++
T Consensus 396 ~dl 398 (751)
T 2xe4_A 396 MMA 398 (751)
T ss_dssp EEC
T ss_pred Eec
Confidence 675
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.82 E-value=2.3e-07 Score=92.01 Aligned_cols=195 Identities=10% Similarity=0.063 Sum_probs=115.4
Q ss_pred cEEEEEEC-CCCCEEEEeeC-C----CeEEEEeCCCc-ceEeeeeccCCceeEEEEccCCCEEEEEeCC-----CCEEEE
Q 015490 169 QQLALTFD-SEGTIFAAGSE-N----GNLRVFKWPSL-EIILNESEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVW 236 (406)
Q Consensus 169 ~v~~~~~s-~~g~~l~~~~~-d----g~i~vwd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iw 236 (406)
.+...+|| |||++||.+.. + .+|+++|+.++ +.+.... ......++|+|||+.|+....+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~--~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV--SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE--EEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc--cCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56789999 99998886543 2 35999999988 6321111 1124578999999988887765 257888
Q ss_pred EcCCCeee--eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce-EE--EEee-ecCCCeEEEEEcC
Q 015490 237 DLASSAVA--TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK-RI--RTKQ-VVREPVSSFNVSA 310 (406)
Q Consensus 237 d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~-~~--~~~~-~~~~~i~~~~~sp 310 (406)
++.++... ..+..........+.|+|+++. +++.........|+++|+.++. .. ..+. .......++.|+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~---l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT---LCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSE---EEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCE---EEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 88776422 2222222234567899999985 3344444456789999998752 12 3332 2234455666554
Q ss_pred CCCEEEEEe-CC----CcEEEEECCCc-eEEE-Eeeccccc--ceEEEEEcCCCCeEEEEECCCcEEEEEe
Q 015490 311 DGKLLAVGT-AS----GDISIIDSSSL-QVRT-AVKKAHLG--IVTALAFSYDSRALVSASMDSSVRVTVI 372 (406)
Q Consensus 311 ~~~~l~~~~-~d----g~i~i~d~~~~-~~~~-~~~~~~~~--~v~~~~~sp~~~~l~s~s~dg~i~iw~~ 372 (406)
|+.|+..+ .+ ..|..+|+.+. .... .+. +.. .+..+.+. .+.++++...++..++|-+
T Consensus 330 -g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~--~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 330 -TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD--HSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp -TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC--CCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred -CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC--CCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 55554443 33 25777777652 2222 232 332 34556655 2345566677776555443
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.81 E-value=4.7e-07 Score=86.66 Aligned_cols=241 Identities=12% Similarity=0.044 Sum_probs=145.6
Q ss_pred CCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEECCCCCEEEEeeC------CCeEEEEeCC
Q 015490 125 GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTFDSEGTIFAAGSE------NGNLRVFKWP 197 (406)
Q Consensus 125 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~------dg~i~vwd~~ 197 (406)
+..++++.. ..+|+-+|..+++........... ...... .++ .. ++ .+++++. ++.|..+|..
T Consensus 115 ~~~v~v~~~-dg~l~alD~~tG~~~W~~~~~~~~---~~~~~~~~P~----v~-~g-~v~vg~~~~~~~~~g~v~a~D~~ 184 (571)
T 2ad6_A 115 AGQIVKKQA-NGHLLALDAKTGKINWEVEVCDPK---VGSTLTQAPF----VA-KD-TVLMGCSGAELGVRGAVNAFDLK 184 (571)
T ss_dssp TTEEEEECT-TSEEEEEETTTCCEEEEEECCCGG---GTCBCCSCCE----EE-TT-EEEEECBCGGGTCCCEEEEEETT
T ss_pred CCEEEEEeC-CCEEEEEECCCCCEEEEecCCCCC---ccceeccCCE----EE-CC-EEEEEecCCccCCCCEEEEEECC
Confidence 445555542 236777888888777664432100 000000 111 11 34 4555544 7899999999
Q ss_pred CcceEeeeeccCCc--------------------------------------eeEEEEccCCCEEEEEeCC---------
Q 015490 198 SLEIILNESEAHAS--------------------------------------VKDLSFSPDGKFLVSLGNR--------- 230 (406)
Q Consensus 198 ~~~~~~~~~~~~~~--------------------------------------i~~~~~s~~~~~l~s~s~d--------- 230 (406)
+|+.+..+...... ...+++.++...++.++.+
T Consensus 185 tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~ 264 (571)
T 2ad6_A 185 TGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMR 264 (571)
T ss_dssp TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGS
T ss_pred CCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCcc
Confidence 99987665432110 0235666766677666532
Q ss_pred -------CCEEEEEcCCCeeeeecccCC---------cceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEE
Q 015490 231 -------GPGRVWDLASSAVATPLAKEN---------DELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIR 294 (406)
Q Consensus 231 -------~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~ 294 (406)
+.|..+|.++|+.+-.+.... ..++ .+....+++. ..++..++.+|.++++|..+++.+.
T Consensus 265 ~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~---~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 265 PGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKM---TPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp CSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEE---EEEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcE---EEEEEEeCCCcEEEEEECCCCCEEe
Confidence 258999999998876654321 1111 1222235531 1134456788999999999999877
Q ss_pred EeeecC-------------CCe--------------------------EEEEEcCCCCEEEEEe----------------
Q 015490 295 TKQVVR-------------EPV--------------------------SSFNVSADGKLLAVGT---------------- 319 (406)
Q Consensus 295 ~~~~~~-------------~~i--------------------------~~~~~sp~~~~l~~~~---------------- 319 (406)
...... .++ ..++++|+..++++.+
T Consensus 341 ~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 420 (571)
T 2ad6_A 341 AEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRA 420 (571)
T ss_dssp EEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCT
T ss_pred eecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhcccccccccccccc
Confidence 654321 011 2467888877777654
Q ss_pred ---------------------CCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 320 ---------------------ASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 320 ---------------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.+|.|..||+.+++.+-++. +...+.+..+...+..++.++.|+.|+.||.++++.+
T Consensus 421 g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~--~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 421 GQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKW--EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp TSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEE--ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEec--CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 24789999999999887775 2233333233334567777899999999999999876
Q ss_pred CCc
Q 015490 379 GGL 381 (406)
Q Consensus 379 ~~~ 381 (406)
-++
T Consensus 499 w~~ 501 (571)
T 2ad6_A 499 WNF 501 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.81 E-value=2.1e-06 Score=82.15 Aligned_cols=247 Identities=9% Similarity=0.026 Sum_probs=147.0
Q ss_pred EEEccCCCe----EEEEecCCeEEEEEecccccceeecceeccceeeeccccc-CcEEEEEECCCCCEEEEee------C
Q 015490 119 MAIHPHGDG----IICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV-GQQLALTFDSEGTIFAAGS------E 187 (406)
Q Consensus 119 ~~~sp~~~~----l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~------~ 187 (406)
++++|.+.. ++++.. ..+|+-+|..+++...+........ ..... .++ + .++ .+++++ .
T Consensus 111 ~av~p~~g~~~~rV~v~t~-dg~l~AlDa~TG~~~W~~~~~~~~~---~~~~~ssP~----v-~~g-~V~vg~~g~e~g~ 180 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQL-DGNVAALNAETGETVWKVENSDIKV---GSTLTIAPY----V-VKD-KVIIGSSGAELGV 180 (599)
T ss_dssp CEEECCCSSSCCEEEEECT-TSEEEEEETTTCCEEEEEECCCGGG---TCBCCSCCE----E-ETT-EEEECCBCGGGTC
T ss_pred eEEEecCCcceeEEEEEcC-CCEEEEEECCCCCEEEeecCCCCCc---cceeecCCE----E-ECC-EEEEEecccccCC
Confidence 455444444 666542 2377788888887776644321000 00000 111 1 134 455554 3
Q ss_pred CCeEEEEeCCCcceEeeeeccCCc-------------------------------------e-eEEEEccCCCEEEEEeC
Q 015490 188 NGNLRVFKWPSLEIILNESEAHAS-------------------------------------V-KDLSFSPDGKFLVSLGN 229 (406)
Q Consensus 188 dg~i~vwd~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~s~~~~~l~s~s~ 229 (406)
+|.|+.+|.++|+.+..+...... + ..+++.++..+++.++.
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 799999999999987665432211 0 13456667777777765
Q ss_pred C----------------CCEEEEEcCCCeeeeecccCCc---------ceEEEEEEE-cCCCCceEEEEEEEcCCCcEEE
Q 015490 230 R----------------GPGRVWDLASSAVATPLAKEND---------ELFASCRFS-PLNNEDYVLYIAAITDRGASIV 283 (406)
Q Consensus 230 d----------------~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~ 283 (406)
+ +.|..+|.++|+..-.+...+. .++ .+... .+++. .-+++.++.+|.++
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~---~~~v~~~~~~G~l~ 336 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKA---RKLLTHPDRNGIVY 336 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCE---EEEEEEECTTSEEE
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcE---EEEEEEECCCcEEE
Confidence 5 3799999999988766554321 111 12222 34531 11344567899999
Q ss_pred EEeCCCceEEEEeeecC-------------CC--------------------------eEEEEEcCCCCEEEEEe-----
Q 015490 284 TWNTTTWKRIRTKQVVR-------------EP--------------------------VSSFNVSADGKLLAVGT----- 319 (406)
Q Consensus 284 ~~d~~~~~~~~~~~~~~-------------~~--------------------------i~~~~~sp~~~~l~~~~----- 319 (406)
++|.++++.+....... .+ -..++++|+.+++++..
T Consensus 337 ~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~ 416 (599)
T 1w6s_A 337 TLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICM 416 (599)
T ss_dssp EEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEE
T ss_pred EEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccce
Confidence 99999999877654221 01 12456777766665431
Q ss_pred ----------------------------------CCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC
Q 015490 320 ----------------------------------ASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS 365 (406)
Q Consensus 320 ----------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg 365 (406)
.+|.|..||+.+++.+-... +..+...-.....+.+++.++.|+
T Consensus 417 ~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~--~~~~~~~g~~~tagg~vf~gt~dg 494 (599)
T 1w6s_A 417 DWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM--ERFAVWGGTMATAGDLVFYGTLDG 494 (599)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE--ESSCCCSBCEEETTTEEEEECTTS
T ss_pred eeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec--CCCCccCcceEecCCEEEEECCCC
Confidence 34789999999998877764 222222111223466777899999
Q ss_pred cEEEEEecCCcCCCCc
Q 015490 366 SVRVTVIEDKKKSGGL 381 (406)
Q Consensus 366 ~i~iw~~~~~~~~~~~ 381 (406)
.++.||.++++.+-++
T Consensus 495 ~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKF 510 (599)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCCEEEEe
Confidence 9999999999876444
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.80 E-value=2.4e-06 Score=75.07 Aligned_cols=201 Identities=14% Similarity=0.093 Sum_probs=122.2
Q ss_pred eecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCC--CEEEEEc
Q 015490 161 LSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRG--PGRVWDL 238 (406)
Q Consensus 161 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~--~i~iwd~ 238 (406)
+..+........++|+++|+++++-..++.|..||.... ..... ........+++.++|+++++..... .|..+|.
T Consensus 25 ~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 25 ITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp EEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred eEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 333433456778999999997777667899999997653 33222 2234688999999999655544332 4667777
Q ss_pred CCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceE-EEEee---------ecCCCeEEEEE
Q 015490 239 ASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKR-IRTKQ---------VVREPVSSFNV 308 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~-~~~~~---------~~~~~i~~~~~ 308 (406)
.+++...............++..+.+. + .++...++.|+.+|..+++. +.... ..-.....+
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~----~--~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQ----Y--LTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSE----E--EEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred CCCeEEEEEeCCCccccCcccccCCCc----E--EEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 777654322211222233444433332 2 23334578999999876432 21111 011234455
Q ss_pred cCCCCEEEEEeC-CCcEEEEECCC-ceE--EEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 309 SADGKLLAVGTA-SGDISIIDSSS-LQV--RTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 309 sp~~~~l~~~~~-dg~i~i~d~~~-~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
+|++++|+++.. .+.|..|++.. ++. ...+. .......++++++|+++++....+.|.+++..
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 788887766654 67899999874 321 11221 11345678999999887777777889999864
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.79 E-value=1.4e-05 Score=70.45 Aligned_cols=205 Identities=11% Similarity=-0.023 Sum_probs=124.3
Q ss_pred cCcEEEEEECCCCCEE-EEeeCCCeEEEEeCCC---cceEeeee-ccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCC
Q 015490 167 VGQQLALTFDSEGTIF-AAGSENGNLRVFKWPS---LEIILNES-EAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLAS 240 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l-~~~~~dg~i~vwd~~~---~~~~~~~~-~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~ 240 (406)
......++|++++..| ++-..++.|..+++.. +.....+. ..-.....+++.+.+..|+.+ ...+.|.++++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3567889999866544 4545568999999875 12222222 222356889998755555544 5678899999865
Q ss_pred CeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEe-eecCCCeEEEEEcCCCCEEEEEe
Q 015490 241 SAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTK-QVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
......+. ........+++.|.+.. +|++-. +..+.|...++.... ...+ ...-.....++++|++..|+.+.
T Consensus 109 ~~~~~~~~-~~~~~P~~iavdp~~g~---ly~~d~-~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 109 VKRKTLFR-ENGSKPRAIVVDPVHGF---MYWTDW-GTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp SSEEEEEE-CTTCCEEEEEEETTTTE---EEEEEC-SSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEE-CCCCCcceEEeCCCCCE---EEEEcc-CCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEE
Confidence 43322222 12234678999997764 444432 223789888886433 2222 22234578999999887777665
Q ss_pred C-CCcEEEEECCCceEEEEeecc--cccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 320 A-SGDISIIDSSSLQVRTAVKKA--HLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 320 ~-dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
. .+.|..+|+..... ..+... .......+++. .+..+++-...+.|..++..+++.+.
T Consensus 183 ~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 183 SKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN 243 (316)
T ss_dssp TTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred CCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceE
Confidence 4 67899999874332 222211 22345677775 35555666667889888887776543
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=4.6e-05 Score=68.09 Aligned_cols=209 Identities=8% Similarity=-0.025 Sum_probs=125.9
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCC-CEEEEeeCCCe
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEG-TIFAAGSENGN 190 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~ 190 (406)
....+..++|.+.+..|+.+.-..-+|+.++.........+ .........+++.+.+ .++++-...+.
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-----------~~~~~~p~glavd~~~g~ly~~d~~~~~ 139 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-----------STGLESPGGLAVDWVHDKLYWTDSGTSR 139 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----------CSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-----------eCCCCCccEEEEecCCCeEEEEcCCCCe
Confidence 34557899999888888777633447777776533211110 0112344678888754 45555556789
Q ss_pred EEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe-CC-CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCce
Q 015490 191 LRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG-NR-GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDY 268 (406)
Q Consensus 191 i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (406)
|.+.+++...........-.....++++|.+..|+.+. .. +.|..+++.... ...+....-.....++++|++..
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~-- 216 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRR-- 216 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTE--
T ss_pred EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCE--
Confidence 99999865443322323334678999999766666554 33 678888876433 23332222334678999998775
Q ss_pred EEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEe
Q 015490 269 VLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAV 338 (406)
Q Consensus 269 ~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 338 (406)
+|++ ....+.|..+|+........+.........+++. ++...++-...+.|..++..+++....+
T Consensus 217 -lY~a--D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 217 -MYWV--DAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp -EEEE--ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred -EEEE--ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 4433 4557899999987543322232233456788883 4444444445778888886666554444
No 262
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.72 E-value=1.2e-05 Score=74.16 Aligned_cols=241 Identities=14% Similarity=0.068 Sum_probs=137.7
Q ss_pred CCceEEEEccC--CCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC---
Q 015490 114 DLPYRMAIHPH--GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN--- 188 (406)
Q Consensus 114 ~~v~~~~~sp~--~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--- 188 (406)
..+..++|.|+ ...|+++... -+|+.++..++.... ..........++|+++|+++++....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~------------~~~~~~~P~giavd~dG~lyVad~~~~~~ 205 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDI------------KTTNIGQCADVNFTLNGDMVVVDDQSSDT 205 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEE------------ECCCCSCEEEEEECTTCCEEEEECCSCTT
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEE------------eecCCCCccEEEECCCCCEEEEcCCCCcc
Confidence 35679999984 4455555422 466666654332211 11133567899999999954443311
Q ss_pred C-eEEEEeCCCcceEeeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCeeeeec-ccCCcceEEEEEEEcCCC
Q 015490 189 G-NLRVFKWPSLEIILNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSAVATPL-AKENDELFASCRFSPLNN 265 (406)
Q Consensus 189 g-~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (406)
. .+...+...+...............++++| ++.+.++-..++.|+.+|..++.....+ ..........++|+|+++
T Consensus 206 ~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 206 NTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp SEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred cceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 1 233333221111001111223457789999 6665555556778999998877652222 211122234699999998
Q ss_pred CceEEEEEEEcCCCcEEEEEeCC--CceE--EEEeeec---------------CCCeEEEEE---------cCCCCEEEE
Q 015490 266 EDYVLYIAAITDRGASIVTWNTT--TWKR--IRTKQVV---------------REPVSSFNV---------SADGKLLAV 317 (406)
Q Consensus 266 ~~~~l~~~~~~~~~~~i~~~d~~--~~~~--~~~~~~~---------------~~~i~~~~~---------sp~~~~l~~ 317 (406)
. + ..+....+.|+.++.. ++.. ...+.+. -.....+++ .++|++.++
T Consensus 286 ~---L--Yvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva 360 (433)
T 4hw6_A 286 W---A--YIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC 360 (433)
T ss_dssp E---E--EEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred E---E--EEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE
Confidence 4 3 3444567889997764 3321 1122221 123567999 677776666
Q ss_pred EeCCCcEEEEECCCceEEEEeeccc----------------ccceEEEEEc-CCCCeEEEEECCCcEEEEEec
Q 015490 318 GTASGDISIIDSSSLQVRTAVKKAH----------------LGIVTALAFS-YDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 318 ~~~dg~i~i~d~~~~~~~~~~~~~~----------------~~~v~~~~~s-p~~~~l~s~s~dg~i~iw~~~ 373 (406)
-...+.|+.++. ++......-.+. -.....++++ ++|.++++-..+++|+..+++
T Consensus 361 D~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 361 DRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 666788999985 454433221110 1236789999 677777766677889888875
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.71 E-value=5.5e-07 Score=75.55 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=116.7
Q ss_pred ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc
Q 015490 211 SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW 290 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~ 290 (406)
....+.|+ ++.+..+.+.+|.|+++|+++++....+ ......-..++ +.+.. +|. ..-.++.+.+||..+.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit--~~g~~---Ly~--ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLA--SDGER---LYQ--LTWTEGLLFTWSGMPP 126 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEE--ECSSC---EEE--EESSSCEEEEEETTTT
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEE--EeCCE---EEE--EEccCCEEEEEECCcC
Confidence 45788887 4566777778889999999999988877 43332222343 44554 333 3457899999999999
Q ss_pred eEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecc-cc---cceEEEEEcCCCCeEEEEECCCc
Q 015490 291 KRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKA-HL---GIVTALAFSYDSRALVSASMDSS 366 (406)
Q Consensus 291 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~---~~v~~~~~sp~~~~l~s~s~dg~ 366 (406)
+.+.++...... ..++ +|++.|+.+..++.|.++|..+.+.+..+.-. +. ..++.+.|. +|+..+..-.+..
T Consensus 127 ~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 127 QRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp EEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred cEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 999998865332 3444 66888888877899999999999988887521 22 235677887 7766655556789
Q ss_pred EEEEEecCCcCCCCchH
Q 015490 367 VRVTVIEDKKKSGGLNL 383 (406)
Q Consensus 367 i~iw~~~~~~~~~~~~~ 383 (406)
|.+-|.++++.++.+++
T Consensus 203 I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EEEECTTTCBEEEEEEC
T ss_pred EEEEeCCCCcEEEEEEC
Confidence 99999999998888776
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=2.7e-05 Score=70.70 Aligned_cols=211 Identities=7% Similarity=-0.036 Sum_probs=127.6
Q ss_pred cCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCC-CEEEEeeCCC
Q 015490 111 TDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEG-TIFAAGSENG 189 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg 189 (406)
.....+..++|.+.+..|+.+....-+|+.++.........+ .........+++.+.+ .++++-...+
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-----------~~~~~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-----------STGLESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-----------CSSCSCCCCEEEETTTTEEEEEETTTT
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-----------eCCCCCccEEEEEeCCCeEEEEcCCCC
Confidence 344567899999888777777634447777776533211110 0111234567888754 4445555577
Q ss_pred eEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC-C-CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCc
Q 015490 190 NLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN-R-GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNED 267 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (406)
.|.+.+++.......+.........+++.|.+..|+.+.. . +.|..+++.......... ..-.....++++|++..
T Consensus 182 ~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~- 259 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRR- 259 (386)
T ss_dssp EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTE-
T ss_pred eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCE-
Confidence 8999988654433333333346789999997776666543 3 678888875433222222 22234678999988775
Q ss_pred eEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 268 YVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 268 ~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
+|+ +....+.|..+|+........+.........+++. .+..+++-...+.|..++..+++....+.
T Consensus 260 --lY~--aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 260 --MYW--VDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp --EEE--EETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred --EEE--EECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 443 34567899999987543333333233456788883 44445555557889999976776655554
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.71 E-value=8.6e-06 Score=72.03 Aligned_cols=186 Identities=14% Similarity=0.106 Sum_probs=116.5
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeec--------------------cCCceeEEEEcc-CCCEEEEE
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESE--------------------AHASVKDLSFSP-DGKFLVSL 227 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------~~~~i~~~~~s~-~~~~l~s~ 227 (406)
...+++|+++|++++++..++.|..|+..+++... +.. ....+..+++.+ +++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34578899999878888889999999987654332 210 012478899997 554 5556
Q ss_pred eCCCCEEEEEcCCCeeeeecc---cCCcceEEEEEEEc-CCCCceEEEEEEEc---------------CCCcEEEEEeCC
Q 015490 228 GNRGPGRVWDLASSAVATPLA---KENDELFASCRFSP-LNNEDYVLYIAAIT---------------DRGASIVTWNTT 288 (406)
Q Consensus 228 s~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~l~~~~~~---------------~~~~~i~~~d~~ 288 (406)
...+.+..+|..++....... .........+++.+ ++. +|+.... ...+.|..+|..
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE----EEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 555568888877554221111 11112356789999 775 3333222 124789999988
Q ss_pred CceEEEEeeecCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCce--EEEEeecccccceEEEEEcCCCCeEEEEEC
Q 015490 289 TWKRIRTKQVVREPVSSFNVSADGKLLAVG-TASGDISIIDSSSLQ--VRTAVKKAHLGIVTALAFSYDSRALVSASM 363 (406)
Q Consensus 289 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~ 363 (406)
+++........ .....++++|+|+.|+++ +..+.|.+|++.... ....+.. ..+ ...+++.++|+++++...
T Consensus 174 ~~~~~~~~~~~-~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 174 TKETTLLLKEL-HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TTEEEEEEEEE-SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEE
T ss_pred CCEEEEeccCC-ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecC
Confidence 76643322222 234679999999977666 446889999987421 1112211 223 778999999987776544
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=2.6e-06 Score=70.88 Aligned_cols=161 Identities=16% Similarity=0.097 Sum_probs=114.5
Q ss_pred ceeEEEEccCCCEEEEEeCC--CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC
Q 015490 211 SVKDLSFSPDGKFLVSLGNR--GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT 288 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~ 288 (406)
....+.|++ +.+..+.+.+ ..|+.+|+.+++....+.......-..++.. +.+ +|.+ .-.++.+.+||..
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~---ly~l--tw~~~~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDR---LIQL--TWRNHEGFVYDLA 93 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTE---EEEE--ESSSSEEEEEETT
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCE---EEEE--EeeCCEEEEEECC
Confidence 567899986 5555565654 4899999999999887765443322334443 443 4433 4678999999999
Q ss_pred CceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecc-cc---cceEEEEEcCCCCeEEEEECC
Q 015490 289 TWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKA-HL---GIVTALAFSYDSRALVSASMD 364 (406)
Q Consensus 289 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~---~~v~~~~~sp~~~~l~s~s~d 364 (406)
+.+.+.++...... ..++ ++++.|+++..++.|.++|..+.+.+..+.-. +. ..++.+.|. +|+.++..-.+
T Consensus 94 tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 94 TLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp TTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred cCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 99999998865433 3444 56777777777889999999999988887522 11 245667776 67666555567
Q ss_pred CcEEEEEecCCcCCCCchH
Q 015490 365 SSVRVTVIEDKKKSGGLNL 383 (406)
Q Consensus 365 g~i~iw~~~~~~~~~~~~~ 383 (406)
..|.+.|.++++.++.+++
T Consensus 170 ~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp TEEEEECTTTCBEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEEC
Confidence 8899999999988776654
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.69 E-value=2.6e-05 Score=74.66 Aligned_cols=245 Identities=15% Similarity=0.073 Sum_probs=143.5
Q ss_pred CCeEEEEecCCeEEEEEecccccceeecceeccceeeecccc-cCcEEEEEE-CCCCC-EEEEee------CCCeEEEEe
Q 015490 125 GDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLEN-VGQQLALTF-DSEGT-IFAAGS------ENGNLRVFK 195 (406)
Q Consensus 125 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~-s~~g~-~l~~~~------~dg~i~vwd 195 (406)
+..++++.. ..+|+-+|..+++............ .... ..++ +.= ..+|+ .+++++ .++.|+.+|
T Consensus 117 ~~~v~~~t~-dg~l~AlD~~TG~~~W~~~~~~~~~---~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD 190 (582)
T 1flg_A 117 GDKVFFGTL-DASVVALNKNTGKVVWKKKFADHGA---GYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARD 190 (582)
T ss_dssp TTEEEEEET-TTEEEEEESSSCCEEEEEECSCGGG---TCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEEC
T ss_pred CCEEEEEeC-CCEEEEEECCCCCEEeeecCCCCCc---CcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEE
Confidence 345555542 2267778888888776654321100 0000 1111 111 11233 565654 378999999
Q ss_pred CCCcceEeeeeccCCc-----------------------------------------eeEEEEccCCCEEEEEeC-----
Q 015490 196 WPSLEIILNESEAHAS-----------------------------------------VKDLSFSPDGKFLVSLGN----- 229 (406)
Q Consensus 196 ~~~~~~~~~~~~~~~~-----------------------------------------i~~~~~s~~~~~l~s~s~----- 229 (406)
..+|+.+......... -..+++.|+..+++.++.
T Consensus 191 ~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~ 270 (582)
T 1flg_A 191 PDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPW 270 (582)
T ss_dssp TTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSS
T ss_pred CCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcc
Confidence 9999877654321100 013556677677776653
Q ss_pred ---------------C----CCEEEEEcCCCeeeeecccC-Cc--------ceEEEEEEE-cCCCCceEEEEEEEcCCCc
Q 015490 230 ---------------R----GPGRVWDLASSAVATPLAKE-ND--------ELFASCRFS-PLNNEDYVLYIAAITDRGA 280 (406)
Q Consensus 230 ---------------d----~~i~iwd~~~~~~~~~~~~~-~~--------~~~~~~~~~-~~~~~~~~l~~~~~~~~~~ 280 (406)
| +.|.-+|.++|+..-.++.. +. .++ -+... .+++. .-+++.++.+|
T Consensus 271 ~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~---~~~v~~~~~~G 346 (582)
T 1flg_A 271 NTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKI---VKATAHADRNG 346 (582)
T ss_dssp CGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCE---EEEEEEECTTS
T ss_pred cCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCE---EEEEEEECCCc
Confidence 2 57999999999987766432 11 111 11221 34541 11345568899
Q ss_pred EEEEEeCCCceEEEEeeecCC-------------C--------------------------------eEEEEEcCCCCEE
Q 015490 281 SIVTWNTTTWKRIRTKQVVRE-------------P--------------------------------VSSFNVSADGKLL 315 (406)
Q Consensus 281 ~i~~~d~~~~~~~~~~~~~~~-------------~--------------------------------i~~~~~sp~~~~l 315 (406)
.++++|..+++.+........ + ...++++|+...+
T Consensus 347 ~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~ 426 (582)
T 1flg_A 347 FFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLF 426 (582)
T ss_dssp EEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCE
T ss_pred eEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEE
Confidence 999999999998776554310 0 0134667765555
Q ss_pred EEEe---------------------------------CCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEE
Q 015490 316 AVGT---------------------------------ASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 316 ~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
++.. .+|.|..||+.+++.+-+... ..++..-.....+.+++.++
T Consensus 427 yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~g~ 504 (582)
T 1flg_A 427 YVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE--HLPLWAGVLATAGNLVFTGT 504 (582)
T ss_dssp EEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE--SSCCCSCCEEETTTEEEEEC
T ss_pred EEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecC--CCCCcccceEeCCCEEEEEC
Confidence 5432 257899999999998877652 22222212222466788899
Q ss_pred CCCcEEEEEecCCcCCCCc
Q 015490 363 MDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 363 ~dg~i~iw~~~~~~~~~~~ 381 (406)
.|+.++.||.++++.+-++
T Consensus 505 ~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 505 GDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEECCCCCEEEEe
Confidence 9999999999999886544
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.66 E-value=1.1e-05 Score=78.92 Aligned_cols=258 Identities=11% Similarity=0.023 Sum_probs=138.5
Q ss_pred EEEEEEecCCCCccccceeEE-ecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccccc
Q 015490 89 VLLSHFDFASNSLSDQPVAEL-RTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENV 167 (406)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
..+..+|...+.|.... .+ ..+.....++++.++++.+++|+.....++.+|..+..-... ..+...
T Consensus 219 ~~~~~yd~~t~~w~~~~--~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~----------~~~~~~ 286 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRT--VTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG----------PDMQVA 286 (656)
T ss_dssp EEEEEECTTTCCBCCCE--EEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC----------CCCSSC
T ss_pred EEEEEEeCCCCcEEeCc--ccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC----------CCCCcc
Confidence 36788999888775432 23 223444556888899999998872222455566543321111 011111
Q ss_pred CcEEEEEECCCCCEEEEee-CC-----CeEEEEeCCCcceEeee----eccCCceeEEEEccCCCEEEEEeCC-------
Q 015490 168 GQQLALTFDSEGTIFAAGS-EN-----GNLRVFKWPSLEIILNE----SEAHASVKDLSFSPDGKFLVSLGNR------- 230 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~-~d-----g~i~vwd~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~s~s~d------- 230 (406)
..-.+++..++|++++.|+ .+ ..+.+||..+.+....- ......-....+..++..++.++.+
T Consensus 287 R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~ 366 (656)
T 1k3i_A 287 RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAG 366 (656)
T ss_dssp CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECC
T ss_pred ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEec
Confidence 1223456667999999998 34 57999999876543210 0000000011123345555555444
Q ss_pred --CCEEEEEcCCCeeeeecccCC--------cceEEEEEEEcCCCCceEEEEEEEcCCC--------c---EEEEEeCCC
Q 015490 231 --GPGRVWDLASSAVATPLAKEN--------DELFASCRFSPLNNEDYVLYIAAITDRG--------A---SIVTWNTTT 289 (406)
Q Consensus 231 --~~i~iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~---~i~~~d~~~ 289 (406)
..+..||..+........... ...-.++.|...+.+ +.+.++.+ . .+.+||..+
T Consensus 367 ~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~-----i~v~GG~~~~~~~~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 367 PSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGK-----ILTFGGSPDYQDSDATTNAHIITLGEPGT 441 (656)
T ss_dssp SSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTE-----EEEECCBSSSSSSBCCCCEEEEECCSTTS
T ss_pred CccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCe-----EEEEeCCCCCCCCCcCCcceEEEcCCCCC
Confidence 356788887765332221110 011223444443443 23333322 1 688899887
Q ss_pred ceEEEEe--eecCC-CeEEEEEcCCCCEEEEEeCC-----------CcEEEEECCCceEEEEeec-ccccceEEEEEcCC
Q 015490 290 WKRIRTK--QVVRE-PVSSFNVSADGKLLAVGTAS-----------GDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYD 354 (406)
Q Consensus 290 ~~~~~~~--~~~~~-~i~~~~~sp~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~ 354 (406)
.+-.... ..+.. .-.+++..|+++.+++|+.+ ..+.+||..+.+-...-.. ..........+.|+
T Consensus 442 ~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~d 521 (656)
T 1k3i_A 442 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPD 521 (656)
T ss_dssp CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTT
T ss_pred CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCC
Confidence 6543332 11222 12355677899999998854 4689999877653322110 11112234556799
Q ss_pred CCeEEEEEC
Q 015490 355 SRALVSASM 363 (406)
Q Consensus 355 ~~~l~s~s~ 363 (406)
|+.++.|+.
T Consensus 522 g~v~v~GG~ 530 (656)
T 1k3i_A 522 GRVFNGGGG 530 (656)
T ss_dssp SCEEEEECC
T ss_pred cEEEecCCC
Confidence 999999885
No 269
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.64 E-value=5e-05 Score=72.61 Aligned_cols=184 Identities=15% Similarity=0.134 Sum_probs=114.9
Q ss_pred EEECCCCCEEEEeeCC----------------CeEEEEeCCCcceEeeeeccCC------ceeE---EEEccCCC---EE
Q 015490 173 LTFDSEGTIFAAGSEN----------------GNLRVFKWPSLEIILNESEAHA------SVKD---LSFSPDGK---FL 224 (406)
Q Consensus 173 ~~~s~~g~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~------~i~~---~~~s~~~~---~l 224 (406)
+++.++...++.+..+ +.|..+|.++++.+..+..... .+.. +....+|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 4566665666655432 3699999999998776653211 1111 22224674 56
Q ss_pred EEEeCCCCEEEEEcCCCeeeeecccCC------------cceE--------------------------EEEEEEcCCCC
Q 015490 225 VSLGNRGPGRVWDLASSAVATPLAKEN------------DELF--------------------------ASCRFSPLNNE 266 (406)
Q Consensus 225 ~s~s~d~~i~iwd~~~~~~~~~~~~~~------------~~~~--------------------------~~~~~~~~~~~ 266 (406)
+.++.+|.++++|..+|+.+....... ..++ ..++++|+...
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 399 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT 399 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence 778889999999999998776543221 0111 23567776652
Q ss_pred ceEEEEEEEc----------------------------------CCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCC
Q 015490 267 DYVLYIAAIT----------------------------------DRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADG 312 (406)
Q Consensus 267 ~~~l~~~~~~----------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~ 312 (406)
+|+.... ..++.|..||+.+++.+-++.... .+.+..+...+
T Consensus 400 ---~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~g 475 (571)
T 2ad6_A 400 ---LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKG 475 (571)
T ss_dssp ---EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETT
T ss_pred ---EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECC
Confidence 3333210 246899999999999887776442 22222233346
Q ss_pred CEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEE
Q 015490 313 KLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVS 360 (406)
Q Consensus 313 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 360 (406)
..+++++.||.|+.+|.++++.+..+..+....-..+.+..+|+.++.
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 678889999999999999999998886333222223445567765443
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.63 E-value=5.3e-05 Score=69.08 Aligned_cols=209 Identities=11% Similarity=-0.044 Sum_probs=127.7
Q ss_pred ccCcEEEEEECCCCCEEEEe-eCCCeEEEEeCCCc----ceEeeeeccCCceeEEEEccCCCEEEE-EeCCCCEEEEEcC
Q 015490 166 NVGQQLALTFDSEGTIFAAG-SENGNLRVFKWPSL----EIILNESEAHASVKDLSFSPDGKFLVS-LGNRGPGRVWDLA 239 (406)
Q Consensus 166 ~~~~v~~~~~s~~g~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~s-~s~d~~i~iwd~~ 239 (406)
....+..++|++.+..|+.. ...+.|+.+++... .....+.........+++.+.+..|+. -...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34677899999865555444 45688999988652 122222223336788999885554544 4567789999987
Q ss_pred CCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe
Q 015490 240 SSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
.......+.. .......+++.|.+.. +|++-. +..+.|...++............-.....+++++++..|+.+.
T Consensus 190 g~~~~~l~~~-~~~~P~~iavdp~~g~---ly~td~-~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 190 GVKRKTLFRE-NGSKPRAIVVDPVHGF---MYWTDW-GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp TCSEEEEEEC-SSCCEEEEEEETTTTE---EEEEEC-SSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEeC-CCCCcceEEEecccCe---EEEEeC-CCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEE
Confidence 5543333322 2234678999997764 444432 3347888888875433332222225678999999888887775
Q ss_pred C-CCcEEEEECCCceEEEEeec-ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCC
Q 015490 320 A-SGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGG 380 (406)
Q Consensus 320 ~-dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~ 380 (406)
. .+.|..+|+........... ..-....++++. .+..+.+-...+.|..++..+++.+..
T Consensus 265 ~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 326 (400)
T ss_dssp TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEE
T ss_pred CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEE
Confidence 4 67899999875433322221 122345577763 344555666678899898777765443
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.62 E-value=1.1e-05 Score=70.52 Aligned_cols=193 Identities=11% Similarity=0.168 Sum_probs=123.8
Q ss_pred CEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccC----CCE--EEEEe--C--CCCEEEEEcC--CCeeeeec
Q 015490 180 TIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPD----GKF--LVSLG--N--RGPGRVWDLA--SSAVATPL 247 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~----~~~--l~s~s--~--d~~i~iwd~~--~~~~~~~~ 247 (406)
.+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+. ++.++ . +++|.+|++. ++. +..+
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 55666667789999999 8888877643 45666666552 332 33333 3 5789999773 333 4333
Q ss_pred cc---C--Cc-ceEEEEEE--EcCCCCceEEEEEEEcCCCcEEEEEeC-------CCceEEEEeeecCCCeEEEEEcCCC
Q 015490 248 AK---E--ND-ELFASCRF--SPLNNEDYVLYIAAITDRGASIVTWNT-------TTWKRIRTKQVVREPVSSFNVSADG 312 (406)
Q Consensus 248 ~~---~--~~-~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~i~~~d~-------~~~~~~~~~~~~~~~i~~~~~sp~~ 312 (406)
.. . .. ..+..+++ +|.... +++++ ...++.+..|++ .+.+.++++... +.+..+...+..
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~---~yafV-~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~ 191 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGK---YYAMV-TGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEY 191 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCC---EEEEE-ECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTT
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCc---EEEEE-ECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCC
Confidence 21 1 11 23445666 554443 23333 456689999888 344667777765 578899999999
Q ss_pred CEEEEEeCCCcEEEEECC-----CceEEEEeeccc-ccceEEEEE--cCCCC-eEEEEE-CCCcEEEEEec-CCcCCCCc
Q 015490 313 KLLAVGTASGDISIIDSS-----SLQVRTAVKKAH-LGIVTALAF--SYDSR-ALVSAS-MDSSVRVTVIE-DKKKSGGL 381 (406)
Q Consensus 313 ~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~-~~~v~~~~~--sp~~~-~l~s~s-~dg~i~iw~~~-~~~~~~~~ 381 (406)
..|+++-++.-|..++.+ +.+.+..+..++ ...+..|++ .++++ +|++++ .++++.+||.+ +.+.++.|
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999999998778888865 345555542222 236788887 45665 666666 57799999996 55555555
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=8.2e-05 Score=62.71 Aligned_cols=197 Identities=10% Similarity=0.094 Sum_probs=125.3
Q ss_pred CcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcceEeeeec-cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCee--
Q 015490 168 GQQLALTFDSEGT-IFAAGSENGNLRVFKWPSLEIILNESE-AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAV-- 243 (406)
Q Consensus 168 ~~v~~~~~s~~g~-~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~-- 243 (406)
..+..++|+|+++ ++++...++.|...|.. ++....+.- .....-.+++.+++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 5689999999765 55557778899999987 777766643 224678899998887766665677899998765432
Q ss_pred -eeecc-----cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-CceEEEEee-------ecCCCeEEEEEc
Q 015490 244 -ATPLA-----KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-TWKRIRTKQ-------VVREPVSSFNVS 309 (406)
Q Consensus 244 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~~~~~~~-------~~~~~i~~~~~s 309 (406)
..... .........++|+|.+.. ++ ++.......|+.|+-. ....+..+. .....+.+++++
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~---L~-va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHT---FW-FFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTE---EE-EEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eeeeeccccccccccCCcceEEEeCCCCE---EE-EEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 12221 123444789999999875 33 3443434467777621 111111111 122357899999
Q ss_pred CCCC-EEEEEeCCCcEEEEECCCceEEEEeec--ccc------cceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 310 ADGK-LLAVGTASGDISIIDSSSLQVRTAVKK--AHL------GIVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 310 p~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~------~~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
|... +++.......+.++|.+ ++.+..+.- +.. ...-.|+|.++|+..++ +..+.++++.
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 9654 55555557788999976 555555431 111 24579999999985554 6776555553
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.58 E-value=4.1e-05 Score=67.36 Aligned_cols=205 Identities=12% Similarity=-0.031 Sum_probs=125.2
Q ss_pred CcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcceEe-eeeccCCceeEEEEccCCCEEE-EEeCCCCEEEEEcCCCeee
Q 015490 168 GQQLALTFDSEG-TIFAAGSENGNLRVFKWPSLEIIL-NESEAHASVKDLSFSPDGKFLV-SLGNRGPGRVWDLASSAVA 244 (406)
Q Consensus 168 ~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~iwd~~~~~~~ 244 (406)
.....++|.+.+ .++.+-...+.|..+++....... .+...-.....+++.+.+..|+ +-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 456788999854 455555567889999987653211 1222223567889987555554 4456678999998654322
Q ss_pred eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCc
Q 015490 245 TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGD 323 (406)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~ 323 (406)
..+. ........+++.|.+.. +|++- .+..+.|...++............-.....++++|++..|+.+.. .+.
T Consensus 115 ~l~~-~~~~~P~giavdp~~g~---ly~td-~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 115 VLFW-QELDQPRAIALDPSSGF---MYWTD-WGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp EEEC-SSCSSEEEEEEEGGGTE---EEEEE-CSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEe-CCCCCccEEEEeCCCCE---EEEEe-cCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCE
Confidence 2222 22334578999987663 44432 234678999888643322222222245689999998777776654 678
Q ss_pred EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCC
Q 015490 324 ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSG 379 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~ 379 (406)
|..+|+..... ..+..........+++.. +..+.+-...+.|..++..+++...
T Consensus 190 I~~~d~dG~~~-~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 190 IHKSNLDGTNR-QAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEEEETTSCSC-EEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEcCCCCce-EEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceE
Confidence 99999874332 222222334566777753 3455555567889889887776543
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.58 E-value=0.00028 Score=70.49 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=149.8
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
...|.++...+++...+.+.++.+ +.++..+.+. ..+..... .. ..-....|.++...++|.+.+ |+.+ -|.
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl--~~~~~~~~~~-~~~~~~~~--~~-~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~ 285 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGL--FLINPKTKEI-KNYLHSPS--NP-KSISSNYIRSLAMDSQNRLWI-GTFN-DLN 285 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCE--EEEETTTTEE-EEECCCTT--CT-TSCSCSBEEEEEECTTSCEEE-EESS-CEE
T ss_pred CCeeEEEEEcCCCCEEEEECCCCe--EEEeCCCCeE-EEeecCCC--Cc-cccCCCeEEEEEEcCCCCEEE-EeCC-hhh
Confidence 467888888887775554434444 4455433221 11110000 00 001235699999998887554 4455 588
Q ss_pred EEeCCCcceEeeeec-------cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc-----cCCcceEEEEEE
Q 015490 193 VFKWPSLEIILNESE-------AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA-----KENDELFASCRF 260 (406)
Q Consensus 193 vwd~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~ 260 (406)
+||..++........ ....|.++...++|. |..|+.++.|..|+..++....... .-....|.++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence 899877654432211 123799999998887 5667777889999876554322111 112345778887
Q ss_pred EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee--------ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q 015490 261 SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ--------VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 261 ~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~--------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
.+++. + +++ ..++.|..||..+++...-.. .....|.++...++|+.|.+|+.++-|.+||..++
T Consensus 365 d~~g~----l-WiG--t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 365 DKDKN----L-WIG--TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp CTTSC----E-EEE--ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred CCCCC----E-EEE--ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 77776 2 333 345568899988765433221 12357899999999986677787777999999877
Q ss_pred eEEEEeec---ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 333 QVRTAVKK---AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 333 ~~~~~~~~---~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+....... .+...|.++...++|++.+. +. +.+.+|+..++
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQR 481 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTT
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCC
Confidence 64432210 13456899999988886654 44 45888887654
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.56 E-value=0.00045 Score=62.86 Aligned_cols=230 Identities=10% Similarity=0.015 Sum_probs=135.2
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccc-ccC
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVG 168 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 168 (406)
.+..++.+... ...+......+..++|++.+..|+.+....-+|+.++........ ....... ...
T Consensus 93 ~I~~i~l~~~~-----~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~--------~~~~~~~~~~~ 159 (400)
T 3p5b_L 93 EVRKMTLDRSE-----YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--------SYDTVISRDIQ 159 (400)
T ss_dssp EEEEECTTSCS-----CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C--------CCEEEECSSCS
T ss_pred eeEEEccCCcc-----eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC--------cceEEEeCCCC
Confidence 45555555432 223334456789999999888787776333467666654311000 0000111 224
Q ss_pred cEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeee
Q 015490 169 QQLALTFDS-EGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVAT 245 (406)
Q Consensus 169 ~v~~~~~s~-~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~ 245 (406)
....+++.+ .++++++-...+.|.+.+++.......+.........+++.|.+.+|+.+.. .+.|...++.......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 567888887 4455555566789999998765444333333346789999997776666542 3688888886433322
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEEEEcCCCCEEEEEeCCCc
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSFNVSADGKLLAVGTASGD 323 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~ 323 (406)
.+. ..-.....+++++++.. +|++ ....+.|..+|+........... .-.....+++. .+..+++-...+.
T Consensus 240 ~~~-~~l~~P~glavd~~~~~---lY~a--D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~ 312 (400)
T 3p5b_L 240 LVT-ENIQWPNGITLDLLSGR---LYWV--DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 312 (400)
T ss_dssp EEC-SSCSCEEEEEEETTTTE---EEEE--ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS
T ss_pred EEE-CCCCceEEEEEEeCCCE---EEEE--ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe
Confidence 222 22234678999998875 4443 45678999999875433222222 12345677773 3334445555788
Q ss_pred EEEEECCCceEEEEee
Q 015490 324 ISIIDSSSLQVRTAVK 339 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~ 339 (406)
|..+|..+++.+..+.
T Consensus 313 V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 313 IFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEESSSCCCCEEEE
T ss_pred EEEEEcCCCCceEEEe
Confidence 9999977776655554
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=7.9e-05 Score=68.99 Aligned_cols=248 Identities=9% Similarity=0.006 Sum_probs=142.9
Q ss_pred CceEEEEcc-CCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEE-------CCCCCEEEEee
Q 015490 115 LPYRMAIHP-HGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTF-------DSEGTIFAAGS 186 (406)
Q Consensus 115 ~v~~~~~sp-~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~~g~~l~~~~ 186 (406)
....|+|.| +...|+++.+..-+|+.++.........+... .........++| +++|+.|+++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~--------~~~~~~p~~ia~~~~~~~~d~~G~~lyvad 211 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN--------TIPTNRIRSIAFNKKIEGYADEAEYMIVAI 211 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT--------TSSCSBEEEEEECCCBTTTBCTTCEEEEEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC--------ccccCCCcEEEEeecccccCCCCCEEEEEe
Confidence 356899998 46667776655557888886543322211110 001235789999 99998666665
Q ss_pred CCC-------eEEEEeCCC-cceE-----eeeeccCCceeEEEEccCCCE-EEEEeCCCCEEEEEcC-------CCee--
Q 015490 187 ENG-------NLRVFKWPS-LEII-----LNESEAHASVKDLSFSPDGKF-LVSLGNRGPGRVWDLA-------SSAV-- 243 (406)
Q Consensus 187 ~dg-------~i~vwd~~~-~~~~-----~~~~~~~~~i~~~~~s~~~~~-l~s~s~d~~i~iwd~~-------~~~~-- 243 (406)
..+ .|.+++... +... ..+.. ......++.+|++.. +++-..++.|..+|+. ++..
T Consensus 212 ~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~t 290 (496)
T 3kya_A 212 DYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWD 290 (496)
T ss_dssp CCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCC
T ss_pred CCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeec
Confidence 543 266665333 2221 12221 224567889995544 4455567789999987 4543
Q ss_pred ---------eee-cccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeC--CCceE--EEEeeec---C------
Q 015490 244 ---------ATP-LAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNT--TTWKR--IRTKQVV---R------ 300 (406)
Q Consensus 244 ---------~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~--~~~~~--~~~~~~~---~------ 300 (406)
... +..........++|+|+++. +| .+....+.|+.++. .++.. ...+.+. .
T Consensus 291 p~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~---lY--vaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~ 365 (496)
T 3kya_A 291 PIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKY---AY--FGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDV 365 (496)
T ss_dssp CBGGGCTTTEEEEEECSSSSCCEEEEECTTSSE---EE--EEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCB
T ss_pred ccccccccccceeEecCCCCCceEEEEcCCCCE---EE--EEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCc
Confidence 111 11222334568999999984 33 34456788888654 33322 1222221 0
Q ss_pred ------CCeE-EEEEc-------CCCCEEEEEeCCCcEEEEECCCceEEEEeec-------------cc----------c
Q 015490 301 ------EPVS-SFNVS-------ADGKLLAVGTASGDISIIDSSSLQVRTAVKK-------------AH----------L 343 (406)
Q Consensus 301 ------~~i~-~~~~s-------p~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~----------~ 343 (406)
.... .++.. ++|.++++-...+.|+.++ .++.. .++.. +. -
T Consensus 366 ~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f 443 (496)
T 3kya_A 366 GTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARF 443 (496)
T ss_dssp GGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCC
T ss_pred ccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhc
Confidence 1234 44554 4566555555678899998 45543 33321 00 1
Q ss_pred cceEEEEEcCC-CCeEEEEECCCcEEEEEecCCcCC
Q 015490 344 GIVTALAFSYD-SRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 344 ~~v~~~~~sp~-~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.....|+++++ |.++++=+.+.+|+.++++....+
T Consensus 444 ~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 444 RDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred CCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 23678999997 777777677889999999876554
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.54 E-value=0.00038 Score=61.18 Aligned_cols=211 Identities=12% Similarity=0.014 Sum_probs=124.5
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccc---cceeecceeccceeeecccccCcEEEEEECCCC-CEEEEeeC
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVEN---TEIRRLGVKISEKVLSQLENVGQQLALTFDSEG-TIFAAGSE 187 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~ 187 (406)
....+..++|++.+..|+.+....-+|+.++.... ..... .+. ..-.....+++.+.+ +++++-..
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~--------~~~--~~~~~p~glavd~~~~~ly~~d~~ 97 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--------VIS--RDIQAPDGLAVDWIHSNIYWTDSV 97 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEE--------EEC--SSCSCCCEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEE--------EEe--CCCCCcCEEEEeecCCeEEEEECC
Confidence 34567899999988878777643446777765431 11000 000 111345678888654 44455566
Q ss_pred CCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC--CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCC
Q 015490 188 NGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR--GPGRVWDLASSAVATPLAKENDELFASCRFSPLNN 265 (406)
Q Consensus 188 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (406)
.+.|.+++++.................++++|.+..|+.+... +.|...++.. .....+....-.....+++++++.
T Consensus 98 ~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 98 LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSG 176 (316)
T ss_dssp TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTT
T ss_pred CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCC
Confidence 7899999986543332222233467899999977766665543 6788888753 333322212233467899999877
Q ss_pred CceEEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 266 EDYVLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 266 ~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
. +| .+....+.|..+|+........... .......+++. .+..+++-...+.|..++..+++....+.
T Consensus 177 ~---lY--~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 177 R---LY--WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp E---EE--EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred E---EE--EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 5 33 3445678999999875332222221 12345778885 34444555557889999987766555443
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=0.00036 Score=61.32 Aligned_cols=209 Identities=8% Similarity=-0.057 Sum_probs=124.4
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC-CCEEEEeeCCCeEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE-GTIFAAGSENGNLR 192 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~ 192 (406)
..+.+++|.+.+..|+.+.-..-+|+.++......... .+ ...-.....+++.+. +.++++-...+.|.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~--------~~--~~~l~~p~glavd~~~g~ly~~d~~~~~I~ 104 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN--------VV--VSGLLSPDGLACDWLGEKLYWTDSETNRIE 104 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCE--------EE--EECCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEE--------EE--cCCCCCccEEEEEcCCCeEEEEECCCCEEE
Confidence 35678999998777777763444677777654321100 00 011234567888874 45555555678999
Q ss_pred EEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEE
Q 015490 193 VFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVL 270 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (406)
+++++.................+++.|.+..|+.+.. .+.|...++.... ...+....-.....+++++++.. +
T Consensus 105 ~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~---l 180 (318)
T 3sov_A 105 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQK---L 180 (318)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTE---E
T ss_pred EEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCE---E
Confidence 9998654332222233346789999997666666653 5678888875432 22221122234578999998775 4
Q ss_pred EEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 271 YIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 271 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
|+ +....+.|..+|+..................+++.. +..+.+-...+.|..++..+++....+.
T Consensus 181 Y~--aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 181 YW--ADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EE--EETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EE--EECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 33 345678999999875332222222234567788753 3344444457889999987776555543
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.49 E-value=0.00047 Score=65.98 Aligned_cols=183 Identities=15% Similarity=0.100 Sum_probs=113.9
Q ss_pred EEEECCCCCEEEEeeCC----------------CeEEEEeCCCcceEeeeeccCCc------e---eEEEEc-cCC---C
Q 015490 172 ALTFDSEGTIFAAGSEN----------------GNLRVFKWPSLEIILNESEAHAS------V---KDLSFS-PDG---K 222 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~d----------------g~i~vwd~~~~~~~~~~~~~~~~------i---~~~~~s-~~~---~ 222 (406)
.+++.++..+++.+..+ +.|..+|.++|+.+..+...+.. . .-+... .+| .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 34566666777776554 48999999999988766543221 1 112222 467 4
Q ss_pred EEEEEeCCCCEEEEEcCCCeeeeecccCC------------cceE--------------------------EEEEEEcCC
Q 015490 223 FLVSLGNRGPGRVWDLASSAVATPLAKEN------------DELF--------------------------ASCRFSPLN 264 (406)
Q Consensus 223 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------------~~~~--------------------------~~~~~~~~~ 264 (406)
.++.++.+|.++++|.++|+.+....... ..++ ..++++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 67778899999999999998775443211 1111 134566655
Q ss_pred CCceEEEEEE----------------------------E--cC------CCcEEEEEeCCCceEEEEeeecCCCeEEEEE
Q 015490 265 NEDYVLYIAA----------------------------I--TD------RGASIVTWNTTTWKRIRTKQVVREPVSSFNV 308 (406)
Q Consensus 265 ~~~~~l~~~~----------------------------~--~~------~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~ 308 (406)
.. +|+-. . .+ ..+.|..||+.+++.+-+..... +...-.+
T Consensus 405 ~~---~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~ 480 (599)
T 1w6s_A 405 EL---FFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTM 480 (599)
T ss_dssp TE---EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCE
T ss_pred CE---EEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcce
Confidence 42 22211 0 01 45899999999999877765432 1111112
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeE
Q 015490 309 SADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRAL 358 (406)
Q Consensus 309 sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 358 (406)
...+.+++.++.|+.++.||.++++.+-++..+......-+.+..+|+..
T Consensus 481 ~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 481 ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY 530 (599)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred EecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEE
Confidence 23467888899999999999999999988763322222345566677643
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.48 E-value=0.00028 Score=67.52 Aligned_cols=184 Identities=15% Similarity=0.155 Sum_probs=114.7
Q ss_pred EEEECCCCCEEEEeeC--------------------C----CeEEEEeCCCcceEeeeecc-CC-----ceeE-EEEc--
Q 015490 172 ALTFDSEGTIFAAGSE--------------------N----GNLRVFKWPSLEIILNESEA-HA-----SVKD-LSFS-- 218 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~--------------------d----g~i~vwd~~~~~~~~~~~~~-~~-----~i~~-~~~s-- 218 (406)
.+++.|+..+++.+.. | +.|..+|..+|+.+..+... +. .+.. +...
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 4567777777776652 2 68999999999988776432 11 1111 1122
Q ss_pred -cCCC---EEEEEeCCCCEEEEEcCCCeeeeecccCC------------cceE---------------------------
Q 015490 219 -PDGK---FLVSLGNRGPGRVWDLASSAVATPLAKEN------------DELF--------------------------- 255 (406)
Q Consensus 219 -~~~~---~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------------~~~~--------------------------- 255 (406)
.+|+ .++.++.+|.++++|.++|+.+..+.... ..++
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 409 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL 409 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTT
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCc
Confidence 4674 67888999999999999998775443221 0000
Q ss_pred -----EEEEEEcCCCCceEEEEEEE------------------------------cCCCcEEEEEeCCCceEEEEeeecC
Q 015490 256 -----ASCRFSPLNNEDYVLYIAAI------------------------------TDRGASIVTWNTTTWKRIRTKQVVR 300 (406)
Q Consensus 256 -----~~~~~~~~~~~~~~l~~~~~------------------------------~~~~~~i~~~d~~~~~~~~~~~~~~ 300 (406)
..++++|.... +|+... ....+.|..||+.+++.+-+.....
T Consensus 410 Gg~~w~~~a~dp~~g~---~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~ 486 (582)
T 1flg_A 410 GGKNWNPMAYSQDTGL---FYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL 486 (582)
T ss_dssp CSSCSSCCEECTTTCC---EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS
T ss_pred cccCCCCceECCCCCE---EEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC
Confidence 12345554442 222211 1246899999999999887766442
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEE
Q 015490 301 EPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALV 359 (406)
Q Consensus 301 ~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 359 (406)
++..-.....+.++++++.|+.++.||.++++.+.++.........-+.+..+|+..+
T Consensus 487 -~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 487 -PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp -CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred -CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 2221112224678888999999999999999999888632221122366667776443
No 281
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.48 E-value=0.00033 Score=70.04 Aligned_cols=240 Identities=10% Similarity=0.095 Sum_probs=147.5
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
..|.++...++|...+.+.++.+..+ +..... ...+...+. ..--....|.++...++|.+. .|+.++-|..
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~--~~~~~~-~~~~~~~~~----~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~ 381 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYY--HPIRNR-FKNIRNIPY----KNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNL 381 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEE--CGGGGS-SEEECCCTT----SSSCSCSSEEEEEECTTSCEE-EEESSSCEEE
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEe--CCCccc-ceEEcCCCC----CCCCCCCeeEEEEECCCCCEE-EEECCCCeEE
Confidence 56888888888775544435555444 332211 111100000 000123568999999888754 5677777899
Q ss_pred EeCCCcceEeeeec--------cCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeeccc---CCcceEEEEEEEc
Q 015490 194 FKWPSLEIILNESE--------AHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAK---ENDELFASCRFSP 262 (406)
Q Consensus 194 wd~~~~~~~~~~~~--------~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~ 262 (406)
|+..++........ ....|.++...++++.|..|+.++.+..||..+++....... .....+.++...+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 461 (795)
T 4a2l_A 382 YNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG 461 (795)
T ss_dssp ECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS
T ss_pred EcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC
Confidence 99877654332211 134789999988888567788777899999987765432211 1234577887777
Q ss_pred CCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee------ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 263 LNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ------VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 263 ~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
++. + ++++. +.|..||..+++...... .....|.++...++|++.+.. . +-+..||..+.+.
T Consensus 462 ~g~----l-wigt~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-- 529 (795)
T 4a2l_A 462 EGN----L-WLGTL---SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-- 529 (795)
T ss_dssp SSC----E-EEEES---SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--
T ss_pred CCC----E-EEEec---CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--
Confidence 765 2 34432 358889988765433221 123568999999998766544 4 4588899877665
Q ss_pred Eee------cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 337 AVK------KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 337 ~~~------~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
.+. ......|.++...++|.+.++. .. .|..||..++
T Consensus 530 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 530 QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDK 572 (795)
T ss_dssp EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTT
T ss_pred EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCC
Confidence 221 1234568999999999866544 44 5788887654
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=4.2e-05 Score=74.66 Aligned_cols=246 Identities=13% Similarity=0.124 Sum_probs=135.6
Q ss_pred eEEEEcc-CCCeEEEEe-cC---------CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEe
Q 015490 117 YRMAIHP-HGDGIICAL-QN---------SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAG 185 (406)
Q Consensus 117 ~~~~~sp-~~~~l~~~~-~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 185 (406)
.++++.| +++.++.|+ +. .-.++.+|..+++-...... .........++++..+++++++|
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~--------~~~~~~~~~~~~~~~~g~lyv~G 260 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT--------VTKHDMFCPGISMDGNGQIVVTG 260 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE--------ECSCCCSSCEEEECTTSCEEEEC
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc--------CCCCCCccccccCCCCCCEEEeC
Confidence 4677777 788777776 21 12567777665432211000 00111223456788999999999
Q ss_pred eC-CCeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEe-CC-----CCEEEEEcCCCeeeeec-----ccCCc
Q 015490 186 SE-NGNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLG-NR-----GPGRVWDLASSAVATPL-----AKEND 252 (406)
Q Consensus 186 ~~-dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s-~d-----~~i~iwd~~~~~~~~~~-----~~~~~ 252 (406)
+. +..+.+||..+.+....-..... .-.+++..++++.++.|+ .+ ..+.+||..+.+-...- .....
T Consensus 261 G~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~ 340 (656)
T 1k3i_A 261 GNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA 340 (656)
T ss_dssp SSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC
T ss_pred CCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc
Confidence 84 45899999877654322111112 223456677899888888 34 56999999877643320 00000
Q ss_pred ceEEEEEEEcCCCCceEEEEEE-------EcCCCcEEEEEeCCCceEEEEeeecC---------CCeEEEEEcC-CCCEE
Q 015490 253 ELFASCRFSPLNNEDYVLYIAA-------ITDRGASIVTWNTTTWKRIRTKQVVR---------EPVSSFNVSA-DGKLL 315 (406)
Q Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~i~~~~~sp-~~~~l 315 (406)
.. ...+..++. +|++. .......+..||..+........... ..-.++.|.. +++.+
T Consensus 341 ~~--~~~~~~~~~----iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~ 414 (656)
T 1k3i_A 341 DK--QGLYRSDNH----AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKIL 414 (656)
T ss_dssp CT--TGGGTTTCS----CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEE
T ss_pred cc--cceeecCCc----eEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEE
Confidence 00 000111121 11111 11234567889987765433222111 1224455543 77888
Q ss_pred EEEeCCC-----------cEEEEECCCceEEEEe-ecccccc-eEEEEEcCCCCeEEEEECC-----------CcEEEEE
Q 015490 316 AVGTASG-----------DISIIDSSSLQVRTAV-KKAHLGI-VTALAFSYDSRALVSASMD-----------SSVRVTV 371 (406)
Q Consensus 316 ~~~~~dg-----------~i~i~d~~~~~~~~~~-~~~~~~~-v~~~~~sp~~~~l~s~s~d-----------g~i~iw~ 371 (406)
++|+.++ .|.+||..+..-.... ...+... -.++...|++++++.|+.+ ..+.+||
T Consensus 415 v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 415 TFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp EECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred EEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence 8887532 6788888766544332 0112222 2355677899999998864 4689999
Q ss_pred ecCCc
Q 015490 372 IEDKK 376 (406)
Q Consensus 372 ~~~~~ 376 (406)
..+.+
T Consensus 495 p~t~~ 499 (656)
T 1k3i_A 495 PEQDT 499 (656)
T ss_dssp GGGTE
T ss_pred CCCCc
Confidence 87654
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.34 E-value=0.00051 Score=67.91 Aligned_cols=207 Identities=12% Similarity=-0.013 Sum_probs=124.6
Q ss_pred ccCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCc----ceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcC
Q 015490 166 NVGQQLALTFDSEG-TIFAAGSENGNLRVFKWPSL----EIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLA 239 (406)
Q Consensus 166 ~~~~v~~~~~s~~g-~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~ 239 (406)
....+..++|.+.. .++++-...+.|+.+++... .....+.........|++.+.++.|+.+ ...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34567889999854 44455555678999988653 2222222233356789998877655555 457789999987
Q ss_pred CCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe
Q 015490 240 SSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
.... ..+..........+++.|.... ||++-. +..+.|...++........+...-.....|++++.+..|+.+.
T Consensus 502 G~~~-~~l~~~~l~~P~gIaVDp~~g~---LYwtD~-g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 502 GVKR-KTLFRENGSKPRAIVVDPVHGF---MYWTDW-GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSSE-EEEEECTTCCEEEEEEETTTTE---EEEEEC-SSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCeE-EEEEeCCCCCcceEEEecCCCC---EEEecC-CCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 5443 3332222334678999998764 444432 2337899999876444333332335678999998777777765
Q ss_pred C-CCcEEEEECCCceEEEEeec-ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 320 A-SGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 320 ~-dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
. .+.|..+++........+.. ..-....+|++.. ++++++-...+.|...+..+++.+
T Consensus 577 ~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 577 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCC
T ss_pred CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcce
Confidence 4 56799999875443333321 1122345666643 344444445677877776666554
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.26 E-value=0.0016 Score=64.36 Aligned_cols=214 Identities=11% Similarity=-0.014 Sum_probs=125.2
Q ss_pred EecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCCCC-EEEEee
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSEGT-IFAAGS 186 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~g~-~l~~~~ 186 (406)
+......+..|+|.+....|+.+....-+|+.++........ .....+. .-.....|++.+.++ ++++-.
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~--------~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~ 490 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--------SYDTVISRDIQAPDGLAVDWIHSNIYWTDS 490 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------CEEEECSSCSCCCEEEEETTTTEEEEEET
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc--------ceeEEEecCCCCcceeeeeecCCcEEEEec
Confidence 334456678999998777777765333466666554211000 0000111 224456788887664 444555
Q ss_pred CCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCC
Q 015490 187 ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELFASCRFSPLN 264 (406)
Q Consensus 187 ~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (406)
..+.|.+.+++.......+.........|++.|.+.+|+.+.. .+.|...++........+. ..-.....+++.+.+
T Consensus 491 ~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-~~l~~P~GLavD~~~ 569 (791)
T 3m0c_C 491 VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLS 569 (791)
T ss_dssp TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SSCSCEEEEEEETTT
T ss_pred CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-CCCCCceEEEEecCC
Confidence 6789999998755443333333346889999998666666653 2678888886543333322 222346789999887
Q ss_pred CCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec--CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCceEEEEe
Q 015490 265 NEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV--REPVSSFNVSADGKLLAVGT-ASGDISIIDSSSLQVRTAV 338 (406)
Q Consensus 265 ~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 338 (406)
.. ||++ ......|..+++............ -....+|++. +..|+... ..+.|...|..+++.+..+
T Consensus 570 ~~---LYwa--D~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 570 GR---LYWV--DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TE---EEEE--ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred Ce---EEEE--eCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 74 4444 355678999998764443333321 1234567664 33555544 4678888887776554444
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.0011 Score=66.23 Aligned_cols=246 Identities=13% Similarity=0.065 Sum_probs=141.7
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
...|.++...++|..-+...++.+..+ +..... ...+...+...... .-....|.++...++|.+. .|+.++-|.
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~--~~~~~~-~~~~~~~~~~~~~~-~l~~~~v~~i~~d~~g~lW-igt~~~Gl~ 386 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFI--SNAPPT-FHTWSYSPTQMNES-SLSNKVVSSVCDDGQGKLW-IGTDGGGIN 386 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEE--CSSCCS-CEEEC----CCCSS-CCSSSCEEEEEECTTSCEE-EEEBSSCEE
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEe--CCCCCc-ceeeccCccccccC-CCCCcceEEEEEcCCCCEE-EEeCCCcEE
Confidence 356788888877764443335555443 322111 11110000000000 0123568999998887654 566566688
Q ss_pred EEeCCCcceEeee---eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc-cCCcceEEEEEEEcCCCCce
Q 015490 193 VFKWPSLEIILNE---SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA-KENDELFASCRFSPLNNEDY 268 (406)
Q Consensus 193 vwd~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (406)
.|+..++...... ......|.++...+++. |..++.++.+..+|..+++...... ......+.++...+++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--- 462 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK--- 462 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE---
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC---
Confidence 8997655432211 11234788998888776 4457776779999987776543221 12234577777766664
Q ss_pred EEEEEEEcCCCcEEEEEeCCCceEEEEeeec-----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecc--
Q 015490 269 VLYIAAITDRGASIVTWNTTTWKRIRTKQVV-----REPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKA-- 341 (406)
Q Consensus 269 ~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-- 341 (406)
+ ++++. +.|..+|..+++........ ...|.++...++|++.+ |+.++-+..||..+.+... +...
T Consensus 463 -l-wigt~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~~~~~~ 535 (781)
T 3v9f_A 463 -I-WIGTH---AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRK-FNQYEG 535 (781)
T ss_dssp -E-EEEET---TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEE-ECTTTT
T ss_pred -E-EEEEC---CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEE-ccCCCC
Confidence 2 33332 46889998876543322211 35789999999887554 4554448889987665433 2211
Q ss_pred -cccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 342 -HLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 342 -~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
....|.++...++|.+.++ +.+|-|..||..++
T Consensus 536 l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNF 569 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTC
T ss_pred CCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCC
Confidence 2346889999988886654 44664477776654
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.19 E-value=0.0033 Score=60.64 Aligned_cols=202 Identities=10% Similarity=-0.048 Sum_probs=126.8
Q ss_pred cCcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCCCeee
Q 015490 167 VGQQLALTFDSEGTIFA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLASSAVA 244 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~~ 244 (406)
-..+..++|++.+..|+ +-..++.|+.++++.......+.........+++.+.+..|+.+ ...+.|.+.++......
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 35678999998665554 44567899999986544333332222356789988766656555 45678999998654322
Q ss_pred eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCc
Q 015490 245 TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGD 323 (406)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~ 323 (406)
..+. ..-.....+++.|.... +|++-. +..+.|...++.......... .-.....++++++++.|+.+.. .+.
T Consensus 116 ~l~~-~~l~~P~~iavdp~~G~---lY~tD~-g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~ 189 (628)
T 4a0p_A 116 VLVW-KDLDSPRALALDPAEGF---MYWTEW-GGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNL 189 (628)
T ss_dssp EEEC-SSCCCEEEEEEETTTTE---EEEEEC-SSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEe-CCCCCcccEEEccCCCe---EEEeCC-CCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCE
Confidence 2221 22234578999987663 444432 336788888886544322222 3356789999998777777655 678
Q ss_pred EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 324 ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
|..+|+..... ..+. .......++++.. +..+++-...+.|...|..+++.
T Consensus 190 I~~~d~dG~~~-~v~~-~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 190 IESSNMLGLNR-EVIA-DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEEEETTSCSC-EEEE-ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEcCCCCce-EEee-ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 99999875443 2332 2333456777765 44445555578888888777654
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.0021 Score=64.07 Aligned_cols=248 Identities=14% Similarity=0.041 Sum_probs=141.1
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecc--eec-cceeeecccccCcEEEEEECCCCCEEEEeeCCC
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLG--VKI-SEKVLSQLENVGQQLALTFDSEGTIFAAGSENG 189 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 189 (406)
...|.++...++|...+....+.+.+ ++..+........ ... .......--....|.++...++|. |-.|+.++
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~--~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMI--LDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGG 333 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEE--EETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSS
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEE--ECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCC
Confidence 35688888877776444333355444 4433222111000 000 000000001235689999998886 44666667
Q ss_pred eEEEEeCCCcceEeeee---------ccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc--cCCcceEEEE
Q 015490 190 NLRVFKWPSLEIILNES---------EAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA--KENDELFASC 258 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~~~---------~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~ 258 (406)
-|..++..+........ .....|.++...++|. |..|+.++.+..||..++....... ......+.++
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 78888876554322111 0223689999888776 5567767779999987654332111 1123457777
Q ss_pred EEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee--ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEE
Q 015490 259 RFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ--VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRT 336 (406)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~ 336 (406)
...+++. + +++ ..++.|..+|..+++...... .....|.++...++|++. .|+. +-|..||..+++...
T Consensus 413 ~~d~~g~----l-Wig--t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 413 LKDSEGN----L-WFG--TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIH 483 (781)
T ss_dssp EECTTSC----E-EEE--ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCE
T ss_pred EECCCCC----E-EEE--eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEe
Confidence 7776665 2 333 335678999988765432211 124578999988888644 4555 458899988765433
Q ss_pred Eeeccc-----ccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 337 AVKKAH-----LGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 337 ~~~~~~-----~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
... .. ...|.++...++|++.+ |+.++.|..++..++
T Consensus 484 ~~~-~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 484 HYD-TSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEC-TTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred ccc-CcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 221 11 35689999999888665 455444777776543
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.16 E-value=0.00058 Score=59.30 Aligned_cols=155 Identities=13% Similarity=0.113 Sum_probs=101.1
Q ss_pred EEEEECCCCCEEEEee-CCCeEEEEeCCCcceEeeeecc-----CC--ceeEEEE---ccCCCEEEEEe-----------
Q 015490 171 LALTFDSEGTIFAAGS-ENGNLRVFKWPSLEIILNESEA-----HA--SVKDLSF---SPDGKFLVSLG----------- 228 (406)
Q Consensus 171 ~~~~~s~~g~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~-----~~--~i~~~~~---s~~~~~l~s~s----------- 228 (406)
.+++|.+....|..++ ..++|..||...+......... .. .+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4688987555555554 7899999998755433222221 11 4689999 68877776543
Q ss_pred --CCCCEEEEEcC---CCeeeeecccC------------CcceEEEEEEEcCCCCceEEEEEEEcCCC-cEEEEEeCCCc
Q 015490 229 --NRGPGRVWDLA---SSAVATPLAKE------------NDELFASCRFSPLNNEDYVLYIAAITDRG-ASIVTWNTTTW 290 (406)
Q Consensus 229 --~d~~i~iwd~~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~~d~~~~ 290 (406)
.+..+..||+. +++.+...... .......++..++|+- |++. +.. +.|..++....
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna----YVt~--s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS----YVAF--ALGMPAIARVSADGK 169 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE----EEEE--EESSCEEEEECTTSC
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE----EEeC--CCCCCeEEEEeCCCC
Confidence 25779999998 77665433211 1124678999999883 4433 334 67777777654
Q ss_pred eEEEEeeec------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q 015490 291 KRIRTKQVV------REPVSSFNVSADGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 291 ~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
. +..+... ....+.|+++|+|+.|++....|.+..+|+.+.
T Consensus 170 ~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 T-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp C-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred E-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 2 2222111 123568999999999988877999999998843
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.13 E-value=0.003 Score=58.08 Aligned_cols=216 Identities=10% Similarity=0.075 Sum_probs=116.8
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec-C---CeEEEEEecccccceeecceeccceeeeccc
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ-N---SCRLFEWDEVENTEIRRLGVKISEKVLSQLE 165 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~-~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (406)
.+..++.... .+..+......+..++++++|+ |+++.. + ...++.+....... . ... +.
T Consensus 163 ~I~~id~~~g-----~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~-~-------~~~---~~ 225 (433)
T 4hw6_A 163 AFRHVDFVNQ-----YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFT-E-------RLS---LC 225 (433)
T ss_dssp CEEEEETTTT-----EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTC-C-------EEE---EE
T ss_pred CEEEEECCCC-----EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCee-c-------ccc---cc
Confidence 4555665432 3334444556689999999999 554432 1 22343343321110 0 001 11
Q ss_pred ccCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcceEeeeecc--CCceeEEEEccCCCEEEEE-eCCCCEEEEEcC--
Q 015490 166 NVGQQLALTFDS-EGTIFAAGSENGNLRVFKWPSLEIILNESEA--HASVKDLSFSPDGKFLVSL-GNRGPGRVWDLA-- 239 (406)
Q Consensus 166 ~~~~v~~~~~s~-~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~-- 239 (406)
.......++++| +|.++++-..++.|+.+|..++.....+... ...-..++|+|++++|+.+ ...+.|+.++..
T Consensus 226 ~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~ 305 (433)
T 4hw6_A 226 NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRE 305 (433)
T ss_dssp ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTT
T ss_pred ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCC
Confidence 223445688999 6776666667789999998877652222221 1233579999999965555 456789888865
Q ss_pred CCeee--eecccC--------------CcceEEEEEE---------EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEE
Q 015490 240 SSAVA--TPLAKE--------------NDELFASCRF---------SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIR 294 (406)
Q Consensus 240 ~~~~~--~~~~~~--------------~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~ 294 (406)
++... ..+... .-.....+++ .+++. +| ++...++.|+.++. ++. +.
T Consensus 306 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~----ly--vaD~~n~~I~~~~~-~G~-v~ 377 (433)
T 4hw6_A 306 TGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD----FY--FCDRDSHTVRVLTP-EGR-VT 377 (433)
T ss_dssp TCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE----EE--EEETTTTEEEEECT-TSE-EE
T ss_pred CcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc----EE--EEECCCCEEEEECC-CCC-EE
Confidence 22211 111110 0112456777 33332 33 34456788888885 443 33
Q ss_pred EeeecC------------------CCeEEEEEc-CCCCEEEEEeCCCcEEEEECC
Q 015490 295 TKQVVR------------------EPVSSFNVS-ADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 295 ~~~~~~------------------~~i~~~~~s-p~~~~l~~~~~dg~i~i~d~~ 330 (406)
++.+.. .....++++ ++|.++++-..++.|+.++++
T Consensus 378 t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 378 TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 332210 235678888 455544444446677777653
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.13 E-value=1.7e-05 Score=77.66 Aligned_cols=212 Identities=12% Similarity=0.013 Sum_probs=117.5
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccc-ccCcEEEEEECCC-CCEEEEeeCCCe
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE-NVGQQLALTFDSE-GTIFAAGSENGN 190 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~-g~~l~~~~~dg~ 190 (406)
...+..++|.+.+..|+.+....-+|+.++....... ......+. .......+++.+. ++++++-...+.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~--------~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC---------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC--------cceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe
Confidence 3456789999988878777522224444444321000 00000010 1123456788754 455555456788
Q ss_pred EEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCce
Q 015490 191 LRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDY 268 (406)
Q Consensus 191 i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (406)
|.++++........+.........++++|.+.+|+.+.. .+.|.++++..... ..+....-.....++|+|++..
T Consensus 477 I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~-- 553 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGR-- 553 (699)
T ss_dssp EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCC--
T ss_pred EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCE--
Confidence 999998755433322222235688999997665555543 26788877753322 2221111223457999998775
Q ss_pred EEEEEEEcCCCcEEEEEeCCCceEEEEeee--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 269 VLYIAAITDRGASIVTWNTTTWKRIRTKQV--VREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 269 ~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
+|+ +....+.|..+|+........+.. .......|++..+ .++++....+.|..++..+++.+..+.
T Consensus 554 -LY~--aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 554 -LYW--VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp -EEE--EETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred -EEE--EecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 333 335678999999875333222221 1122345666543 344444457889999998888777764
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.00018 Score=66.21 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=98.8
Q ss_pred ceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC--CcEEEEEeC
Q 015490 211 SVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR--GASIVTWNT 287 (406)
Q Consensus 211 ~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~i~~~d~ 287 (406)
....++++| ++..|+++...+.|+.+|+.++....... .......++|+++++. +|++-.... ...+..++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~---lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADS---MIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSE---EEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCE---EEEEeCCCCcccceEEEEeC
Confidence 457899998 45566666655889999998766544333 2334678999999984 333332211 223444443
Q ss_pred CCc-eEEEEeeecCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeE-EEEECC
Q 015490 288 TTW-KRIRTKQVVREPVSSFNVSA-DGKLLAVGTASGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRAL-VSASMD 364 (406)
Q Consensus 288 ~~~-~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~s~d 364 (406)
... .....+.. ......++++| +|.++++-..++.|+.++..++................++|+|+|++| ++-...
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 321 11122222 23356788999 666666655678999999987665333221223457899999999955 444567
Q ss_pred CcEEEEEecC
Q 015490 365 SSVRVTVIED 374 (406)
Q Consensus 365 g~i~iw~~~~ 374 (406)
+.|..++...
T Consensus 292 ~~I~~~~~d~ 301 (430)
T 3tc9_A 292 HYILRSDYDW 301 (430)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEeCCc
Confidence 8899988763
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.08 E-value=0.0018 Score=57.70 Aligned_cols=234 Identities=14% Similarity=0.137 Sum_probs=118.3
Q ss_pred CCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEeeC-
Q 015490 112 DSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAGSE- 187 (406)
Q Consensus 112 h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~- 187 (406)
.-.....|+|.|+|+.+++-.. .+|+.++ .+.. ..+. ... ...........++|+|+ +..|+++..
T Consensus 29 ~l~~P~~ia~~pdG~l~V~e~~--g~I~~i~--~g~~-~~~~---~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIAERP--GRIRLFR--EGRL-STYA---ELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CCSCEEEEEECTTSCEEEEETT--TEEEEEE--TTEE-EEEE---ECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCCceEEEEcCCCeEEEEeCC--CeEEEEE--CCCc-cEee---cce--EeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 3456789999999985555434 4666665 2221 1110 000 11123456789999998 545544433
Q ss_pred C-----CeEEEEeCCCcc-----eEee-ee---ccCCceeEEEEccCCCEEEEEeCC-------------CCEEEEEcCC
Q 015490 188 N-----GNLRVFKWPSLE-----IILN-ES---EAHASVKDLSFSPDGKFLVSLGNR-------------GPGRVWDLAS 240 (406)
Q Consensus 188 d-----g~i~vwd~~~~~-----~~~~-~~---~~~~~i~~~~~s~~~~~l~s~s~d-------------~~i~iwd~~~ 240 (406)
. +.|..++...+. .+.. +. ........++|.|||.+.++.+.. +.|.-++...
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 2 578888876431 1111 22 111134689999999766554321 3455555432
Q ss_pred C------------eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC------cEEEEEeCCC-------------
Q 015490 241 S------------AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG------ASIVTWNTTT------------- 289 (406)
Q Consensus 241 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~i~~~d~~~------------- 289 (406)
. .....+.... .....++|+|+... +|+.-.+... ..|.+.....
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~---l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGE---LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCC---EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCC---EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 0 0001111111 12446788884433 4444333221 1344432211
Q ss_pred ---ceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceE------EEEeecccccceEEEEEcCCCCeEEE
Q 015490 290 ---WKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQV------RTAVKKAHLGIVTALAFSYDSRALVS 360 (406)
Q Consensus 290 ---~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~sp~~~~l~s 360 (406)
..++..+. +......++| .+|+++++....+.|...++..... ...+. .....+..+++.|||.++++
T Consensus 255 ~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 255 PRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp TTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEE
T ss_pred CCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEE
Confidence 01122221 1234567777 4666665555567788777754321 12222 22356889999999987766
Q ss_pred EE
Q 015490 361 AS 362 (406)
Q Consensus 361 ~s 362 (406)
..
T Consensus 332 ~~ 333 (352)
T 2ism_A 332 TS 333 (352)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.08 E-value=0.0011 Score=64.01 Aligned_cols=205 Identities=12% Similarity=-0.042 Sum_probs=120.6
Q ss_pred cCcEEEEEECCCCCEEEEe-eCCCeEEEEeCCCcce-EeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCCCee
Q 015490 167 VGQQLALTFDSEGTIFAAG-SENGNLRVFKWPSLEI-ILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLASSAV 243 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~~~-~~dg~i~vwd~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~ 243 (406)
-.....++|++.+..|+.+ ...+.|..++++.... ...+...-.....+++.+.++.|+.+ ...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 3567889999866655554 4467898888865532 22222222467899999866655555 4567899999865433
Q ss_pred eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CC
Q 015490 244 ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SG 322 (406)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg 322 (406)
...+. ..-.....+++.|.+.. +|++-. +..+.|...++............-.....++++++++.|+.+.. .+
T Consensus 119 ~~l~~-~~l~~P~~Iavdp~~g~---ly~tD~-g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 119 KVLFW-QELDQPRAIALDPSSGF---MYWTDW-GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp EEEEC-SSCSCCCCEEEETTTTE---EEEEEC-SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred EEEEe-CCCCCCceEEEecCCCe---EEEecc-CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 22221 22223457899998664 444432 23567877777643332222223345789999998777776654 67
Q ss_pred cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 323 DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 323 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.|..+|+.......... +......++++..+ ..+.+-...+.|...|..+++..
T Consensus 194 ~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 194 FIHKSNLDGTNRQAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp CEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred eEEEecCCCCccEEEEe-CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 89999987544332221 12223456777655 44444456678888888777653
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.04 E-value=6.5e-06 Score=80.68 Aligned_cols=208 Identities=11% Similarity=-0.056 Sum_probs=117.1
Q ss_pred CcEEEEEECCCCCEEEEe-eCCCeEEEEeCCC----cceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCCC
Q 015490 168 GQQLALTFDSEGTIFAAG-SENGNLRVFKWPS----LEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLASS 241 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~-~~dg~i~vwd~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~ 241 (406)
..+..++|++.+..|+.+ ...+.|+.+++.. ......+.........|++.+.+..|+.+ ...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 456678999866655554 4567899999875 22221221122245678887655444444 45678999998755
Q ss_pred eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEe-C
Q 015490 242 AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGT-A 320 (406)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~ 320 (406)
.....+.. .......+++.|.+.. +|++- ....+.|..+++............-.....|+|+|++..|+.+. .
T Consensus 486 ~~~~l~~~-~~~~P~giavDp~~g~---ly~td-~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 486 KRKTLFRE-QGSKPRAIVVDPVHGF---MYWTD-WGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp CEEEECCC-SSCCCCCEECCSSSSC---CEECC-CSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred ceEEEEeC-CCCCcceEEEccCCCc---EEEcc-cCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 43333322 1223457888887664 33322 12236788887764322111111123456899999866665554 4
Q ss_pred CCcEEEEECCCceEEEEeec-ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 321 SGDISIIDSSSLQVRTAVKK-AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 321 dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.+.|..+++........+.. ........|++..+ .++++....+.|..++..+++.+..+
T Consensus 561 ~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred CCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 67899999875333222211 11123445666544 44555556788999987776654433
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0039 Score=54.65 Aligned_cols=143 Identities=13% Similarity=0.220 Sum_probs=92.5
Q ss_pred CCeEEEEeCC--CcceEeeeec------cC-CceeEEEE--ccC-CC-EEEEEeCCCCEEEEEcC-------CCeeeeec
Q 015490 188 NGNLRVFKWP--SLEIILNESE------AH-ASVKDLSF--SPD-GK-FLVSLGNRGPGRVWDLA-------SSAVATPL 247 (406)
Q Consensus 188 dg~i~vwd~~--~~~~~~~~~~------~~-~~i~~~~~--s~~-~~-~l~s~s~d~~i~iwd~~-------~~~~~~~~ 247 (406)
+++|.+|++. ++. +..+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++++
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999773 333 333311 11 46777888 664 44 67788889999999883 33556666
Q ss_pred ccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-----CceEEEEeeec--CCCeEEEEE--cCCCC-EEEE
Q 015490 248 AKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-----TWKRIRTKQVV--REPVSSFNV--SADGK-LLAV 317 (406)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-----~~~~~~~~~~~--~~~i~~~~~--sp~~~-~l~~ 317 (406)
... ..+..|...+.... + ..+.++..|+.+|.+ +++.+..+... ...+..|++ .++++ +|++
T Consensus 177 ~lg--sq~EgcvvDd~~g~---L---yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 177 KMN--SQTEGMAADDEYGR---L---YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp ECS--SCEEEEEEETTTTE---E---EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred cCC--CCcceEEEcCCCCe---E---EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 543 35778888887764 2 233456668888865 34555444211 246788887 55666 6776
Q ss_pred EeC-CCcEEEEECC-CceEEEEee
Q 015490 318 GTA-SGDISIIDSS-SLQVRTAVK 339 (406)
Q Consensus 318 ~~~-dg~i~i~d~~-~~~~~~~~~ 339 (406)
++. ++++.+||.. +.+.+..+.
T Consensus 249 SsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 249 SSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EcCCCCEEEEEECCCCCcEEEEEE
Confidence 664 7789999997 667776663
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.99 E-value=0.0073 Score=53.18 Aligned_cols=233 Identities=11% Similarity=0.059 Sum_probs=121.9
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
...+.+|.|.+ +..++++..+ .|+.- .+.++....+... ......+..+.+.+++..++++. +|.|.
T Consensus 79 ~~~~~~i~~~~-~~~~~~g~~g--~i~~S-~DgG~tW~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~~-~g~v~ 145 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIVGEPP--IMLHT-TDGGQSWSQIPLD--------PKLPGSPRLIKALGNGSAEMITN-VGAIY 145 (327)
T ss_dssp CCEEEEEEEET-TEEEEEEETT--EEEEE-SSTTSSCEECCCC--------TTCSSCEEEEEEEETTEEEEEET-TCCEE
T ss_pred CccEEEEEecC-CeEEEEECCC--eEEEE-CCCCCCceECccc--------cCCCCCeEEEEEECCCCEEEEeC-CccEE
Confidence 44678899986 4444444333 44432 2223222221110 01123466777777777666654 55442
Q ss_pred EEeCCCcceEeee-eccCCceeEEEEccCCCEEEEEeCCCCEEE-EEcCCCeeeeecccCCcceEEEEEEEcCCCCceEE
Q 015490 193 VFKWPSLEIILNE-SEAHASVKDLSFSPDGKFLVSLGNRGPGRV-WDLASSAVATPLAKENDELFASCRFSPLNNEDYVL 270 (406)
Q Consensus 193 vwd~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~s~s~d~~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (406)
. ..+.++.-... ......+..+.+.+++.+++++. ++.+.. .|- .++.-..+.......+..+.+.+++..
T Consensus 146 ~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~---- 218 (327)
T 2xbg_A 146 R-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRL---- 218 (327)
T ss_dssp E-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCE----
T ss_pred E-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCE----
Confidence 2 12233322222 22334788999999988776654 444443 332 122212222223345778888887752
Q ss_pred EEEEEcCCCcEEEEEeCCCceEEEEeeec----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec--cccc
Q 015490 271 YIAAITDRGASIVTWNTTTWKRIRTKQVV----REPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK--AHLG 344 (406)
Q Consensus 271 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~ 344 (406)
+++ ..++.+++.+...++.-..+... ...+.++.+.+++..++++. +|.+ ++..+.++.-..+.. .+..
T Consensus 219 -~~~--~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~ 293 (327)
T 2xbg_A 219 -WMI--VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPS 293 (327)
T ss_dssp -EEE--ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSS
T ss_pred -EEE--eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCC
Confidence 222 23567776643323332222211 23588999998888777654 6766 455554543333321 1235
Q ss_pred ceEEEEEcCCCCeEEEEECCCcEEEEE
Q 015490 345 IVTALAFSYDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 345 ~v~~~~~sp~~~~l~s~s~dg~i~iw~ 371 (406)
.+.++.|.++++ +++++.+|.|.-++
T Consensus 294 ~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 294 NFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 678888876554 66667889765554
No 297
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.97 E-value=0.0066 Score=52.31 Aligned_cols=239 Identities=11% Similarity=0.111 Sum_probs=148.8
Q ss_pred EEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 015490 118 RMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWP 197 (406)
Q Consensus 118 ~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~ 197 (406)
+.-.+|..+.++.=....++|++++. ...++.+.....|.-=.|-.+. .|+..+ +..|+-|+++
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnlet--------------K~klks~~~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~ 134 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEM--------------KSKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSME 134 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTT--------------TEEEEEEECSSCEEEEEECSSS-EEEEEE-SSEEEEEESS
T ss_pred eeeeCCCccEEEEecCCeEEEechHH--------------hhhhcceecCCccEEEEecCCC-eEEEEc-CCcEEEEccc
Confidence 44568988877776688888887764 3333444445566666776554 444443 3589999997
Q ss_pred Ccc-eEeeeeccCC----ceeEEEEccCCCEEEEEeC-------CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCC
Q 015490 198 SLE-IILNESEAHA----SVKDLSFSPDGKFLVSLGN-------RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNN 265 (406)
Q Consensus 198 ~~~-~~~~~~~~~~----~i~~~~~s~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (406)
... +...+..|.. .|.....+++.++++..+- .|.+.+|..+.+. .+.+.+| .... ..+-.++.
T Consensus 135 ~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh-aa~F--~~~~~~g~ 210 (365)
T 2xzh_A 135 GESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH-AASF--AQFKMEGN 210 (365)
T ss_dssp TTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCS-EEEE--EEECCTTC
T ss_pred CCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeee-eeee--EEEecCCC
Confidence 533 3333333332 6777777889998776542 3678889886543 3444443 2111 22222222
Q ss_pred -CceEEEEEEEc-CCCcEEEEEeCCCc---e------EEEEeeec---CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 015490 266 -EDYVLYIAAIT-DRGASIVTWNTTTW---K------RIRTKQVV---REPVSSFNVSADGKLLAVGTASGDISIIDSSS 331 (406)
Q Consensus 266 -~~~~l~~~~~~-~~~~~i~~~d~~~~---~------~~~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~ 331 (406)
....+++.+.. ...+.+++.++... . .+..+-.. ..-..++..|+.-..++.-+.-|.+++||+.+
T Consensus 211 ~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 211 AEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred CCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc
Confidence 22234444433 33468999988432 1 11111111 23346788888888999999999999999999
Q ss_pred ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 332 LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 332 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
+.++..-. -....|...+-..+..-++.....|.|.--.+++.+-
T Consensus 291 gt~i~~nr-IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 291 GTCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp CCEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred CcEEEEec-cCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 99988774 5566676556555555567777999998888887655
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.97 E-value=0.0066 Score=54.09 Aligned_cols=235 Identities=12% Similarity=0.083 Sum_probs=120.8
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEeeC--
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAGSE-- 187 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~-- 187 (406)
-.....|+|.|+|+.+++-.. .+|+.++. ++. ..+.. .. ...........++++|+ +..|+++..
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~--g~I~~~d~-~G~--~~~~~---~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERP--GRLVLISP-SGK--KLVAS---FD--VANVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETT--TEEEEECS-SCE--EEEEE---CC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCC--CEEEEEeC-CCc--eEeec---cc--eeecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 355789999999985555434 46666653 222 11100 00 01123356789999997 444444332
Q ss_pred --C----CeEEEEeCCCc-------ceEee-eecc-CCceeEEEEccCCCEEEEEeCC-------------CCEEEEEcC
Q 015490 188 --N----GNLRVFKWPSL-------EIILN-ESEA-HASVKDLSFSPDGKFLVSLGNR-------------GPGRVWDLA 239 (406)
Q Consensus 188 --d----g~i~vwd~~~~-------~~~~~-~~~~-~~~i~~~~~s~~~~~l~s~s~d-------------~~i~iwd~~ 239 (406)
+ ..|..|+.... +.+.. +... ......++|.|||.+.++.+.. +.|.-++..
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 2 56777776543 11111 2211 1134779999999866664431 344444443
Q ss_pred CCee--------eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC-cEEEEEeCCC--------c--------eEEE
Q 015490 240 SSAV--------ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG-ASIVTWNTTT--------W--------KRIR 294 (406)
Q Consensus 240 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~~d~~~--------~--------~~~~ 294 (406)
++. ...+..... ....++|+|+... +|+.-.+... ..|.+...-. + .++.
T Consensus 178 -G~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~---l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 178 -GRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGV---MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp -SCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCC---EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred -CCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCC---EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 220 011111111 1346889994333 3333222211 2333332110 0 1222
Q ss_pred EeeecCCCeEEEEEc-------CCCCEEEEEeCCCcEEEEECCCc-eEE--EEeecccccceEEEEEcCCCCeEEEEE
Q 015490 295 TKQVVREPVSSFNVS-------ADGKLLAVGTASGDISIIDSSSL-QVR--TAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 295 ~~~~~~~~i~~~~~s-------p~~~~l~~~~~dg~i~i~d~~~~-~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
.+.........++|. .+|+++++....+.|...++... +.. ..+.......+..+++.|||.++++..
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 221112456788884 46767666666778988888753 322 223212245688999999998766654
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.95 E-value=0.0084 Score=52.79 Aligned_cols=239 Identities=13% Similarity=0.119 Sum_probs=126.7
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
...+.+|.|.+++..++++..+ .|+.. ...++.-..+... .-.....+.++.|++ +..+++ +.++.|.
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g--~i~~s-~DgG~tW~~~~~~-------~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~ 102 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNA--TLMET-RDGGQTWEPRTLV-------LDHSDYRFNSVSFQG-NEGWIV-GEPPIML 102 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTT--EEEEE-SSTTSSCEECCCC-------CSCCCCEEEEEEEET-TEEEEE-EETTEEE
T ss_pred CCcEEEEEECCCCcEEEEcCCC--eEEEe-CCCCCCCeECCCC-------CCCCCccEEEEEecC-CeEEEE-ECCCeEE
Confidence 3468899998877777755443 34432 2222222221110 001124578888876 444444 5566554
Q ss_pred EEeCCCcceEeeee---ccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceE
Q 015490 193 VFKWPSLEIILNES---EAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 193 vwd~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
. ..+.++.-.... .....+..+.+.++++.++++ .++.|.. ....++.-..+.......+..+.+.+++.
T Consensus 103 ~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~---- 175 (327)
T 2xbg_A 103 H-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGE---- 175 (327)
T ss_dssp E-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSC----
T ss_pred E-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCc----
Confidence 3 223343322222 122356778887777655544 4554432 11223322222222333577888988765
Q ss_pred EEEEEEcCCCcEEEEEeC--CCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecc---ccc
Q 015490 270 LYIAAITDRGASIVTWNT--TTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKA---HLG 344 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~ 344 (406)
+++.+......+-.|- .+++.+. ......+..+.++++++.+++ +.+|.+++.+.+.++.-..+... +..
T Consensus 176 --~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~ 250 (327)
T 2xbg_A 176 --YVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSV 250 (327)
T ss_dssp --EEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCS
T ss_pred --EEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCc
Confidence 2334444455555563 4555542 233467889999999876654 56787777653334433333211 223
Q ss_pred ceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 345 IVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 345 ~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
.+.++.+.+++..++++ .++.| ++..+.++.
T Consensus 251 ~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~t 281 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQT 281 (327)
T ss_dssp CEEEEEESSSSCEEEEE-STTCE-EEESSTTSS
T ss_pred ceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcc
Confidence 58899999887766654 56766 444444544
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.0023 Score=59.24 Aligned_cols=196 Identities=7% Similarity=0.050 Sum_probs=114.3
Q ss_pred cEEEEEECCC-C-CEEEEeeCCCeEEEEeCCCcceEeeeeccC---CceeEEEE-------ccCCCEEEEEeCCC-----
Q 015490 169 QQLALTFDSE-G-TIFAAGSENGNLRVFKWPSLEIILNESEAH---ASVKDLSF-------SPDGKFLVSLGNRG----- 231 (406)
Q Consensus 169 ~v~~~~~s~~-g-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~i~~~~~-------s~~~~~l~s~s~d~----- 231 (406)
....|+|+|. + +++++-...+.|++.|+.++.......... .....++| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4 444444444678999988766554333222 25789999 99999777776543
Q ss_pred --CEEEEEcCC-Ceee-----eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCC-------CceE----
Q 015490 232 --PGRVWDLAS-SAVA-----TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTT-------TWKR---- 292 (406)
Q Consensus 232 --~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-------~~~~---- 292 (406)
.+.+++... +... ..+.. ......++++|++.. +.++...++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~-----LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA--YKQCNGATIHPINGE-----LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE--ESCCCCEEECTTTCC-----EEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred CceEEEEecCCCCceeecccceeecc--CCCceEEEEcCCCCe-----EEEEECCCCEEEEEecccccccccCceeeccc
Confidence 255665333 2221 11111 112336788887665 34445677899999987 4442
Q ss_pred -------EEE-eee-cCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEC--CCceEE--EEeec--ccc------------c
Q 015490 293 -------IRT-KQV-VREPVSSFNVSADGKLLAVGT-ASGDISIIDS--SSLQVR--TAVKK--AHL------------G 344 (406)
Q Consensus 293 -------~~~-~~~-~~~~i~~~~~sp~~~~l~~~~-~dg~i~i~d~--~~~~~~--~~~~~--~~~------------~ 344 (406)
... +.. .......++|+|+|++|+.+. ..+.|+.++. .++... ..+.. +.. .
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 112 222 224468999999999766654 4678888654 333221 12210 000 1
Q ss_pred ceE-EEEEc-------CCCCeEEEEECCCcEEEEE
Q 015490 345 IVT-ALAFS-------YDSRALVSASMDSSVRVTV 371 (406)
Q Consensus 345 ~v~-~~~~s-------p~~~~l~s~s~dg~i~iw~ 371 (406)
... .++.. ++|.++++-+..++|+.++
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~ 407 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT 407 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEe
Confidence 233 44454 4566666666778888887
No 301
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.90 E-value=0.012 Score=52.81 Aligned_cols=240 Identities=11% Similarity=0.105 Sum_probs=148.7
Q ss_pred eEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeC
Q 015490 117 YRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKW 196 (406)
Q Consensus 117 ~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~ 196 (406)
-+.-.+|..+.++.=....++|++++.. ..++.+.....|.-=.|-.+. .|+..+ +..|+-|++
T Consensus 69 dsAIMnP~~~iiALrag~~lQiFnle~K--------------~klks~~~~e~VvfWkWis~~-~l~lVT-~taVyHWsi 132 (494)
T 1bpo_A 69 DSAIMNPASKVIALKAGKTLQIFNIEMK--------------SKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSM 132 (494)
T ss_dssp SEEEECSSSSCEEEEETTEEEEEETTTT--------------EEEEEEECSSCCCEEEEEETT-EEEEEC-SSEEEEEES
T ss_pred ceeeeCCCCcEEEEecCCeEEEEchHHh--------------hhhcceecCCCceEEEecCCC-eEEEEc-CCeeEEecc
Confidence 3556788888777767888899887642 233333334445444554433 444443 458999999
Q ss_pred CCcc-eEeeeeccCC----ceeEEEEccCCCEEEEEeC-------CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCC
Q 015490 197 PSLE-IILNESEAHA----SVKDLSFSPDGKFLVSLGN-------RGPGRVWDLASSAVATPLAKENDELFASCRFSPLN 264 (406)
Q Consensus 197 ~~~~-~~~~~~~~~~----~i~~~~~s~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (406)
+... +...+..|.. .|.....+++.++++..+- .|.+.+|..+.+. .+.+.+| .... ..+..++
T Consensus 133 ~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh-aa~F--~~~~~~g 208 (494)
T 1bpo_A 133 EGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH-AASF--AQFKMEG 208 (494)
T ss_dssp SSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCS-EEEE--EEEECTT
T ss_pred cCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheee-eeee--EEEecCC
Confidence 7533 3333333322 6777777899998775542 4678889886543 3444443 2222 2233333
Q ss_pred C-CceEEEEEEEc-CCCcEEEEEeCCCc--------eEEEEee-ec---CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 265 N-EDYVLYIAAIT-DRGASIVTWNTTTW--------KRIRTKQ-VV---REPVSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 265 ~-~~~~l~~~~~~-~~~~~i~~~d~~~~--------~~~~~~~-~~---~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
. ....+++.+.. ...+.+++.++... +....+. .. ..-..++..|+.-..++.-+.-|.+++||+.
T Consensus 209 ~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp CSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 2 22234444432 23478999988542 1111111 11 2334678889988899999999999999999
Q ss_pred CceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 331 SLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 331 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
++..+..-. -....|...+-.....-++.....|.|.--.+++.+-
T Consensus 289 Tgt~i~~nr-Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 289 TGTCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp TCCEEEEEE-CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred cceeeeeec-ccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 999988764 5566676666665555677777999998888877655
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.89 E-value=0.016 Score=55.88 Aligned_cols=202 Identities=11% Similarity=0.034 Sum_probs=117.2
Q ss_pred cCcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEE-eCCCCEEEEEcCCCeee
Q 015490 167 VGQQLALTFDSEGTIFA-AGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSL-GNRGPGRVWDLASSAVA 244 (406)
Q Consensus 167 ~~~v~~~~~s~~g~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~iwd~~~~~~~ 244 (406)
-..+..++|.+.+..|+ +-...+.|+.++++.......+...-.....+++.+.+..|+.+ +..+.|.+.++.... .
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~ 426 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-R 426 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-E
Confidence 35678899998554444 44457889999986543332232222356789998755555544 456789999986543 2
Q ss_pred eecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCc
Q 015490 245 TPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGD 323 (406)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~ 323 (406)
..+....-.....+++.|.... +|++-.+ ....|...++............-.....++++++++.|+.+.. .+.
T Consensus 427 ~~l~~~~l~~P~~iavdp~~G~---ly~tD~g-~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~ 502 (619)
T 3s94_A 427 KILISEDLEEPRAIVLDPMVGY---MYWTDWG-EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK 502 (619)
T ss_dssp EEEECTTCCSEEEEEEETTTTE---EEEEECS-SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEECCCCCeeeEEEEcCCCc---EEEecCC-CCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCE
Confidence 2332222334678999997553 4544332 3467777777543322222222346789999998777777655 577
Q ss_pred EEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 324 ISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 324 i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
|..+++........+. ..-....+++...+ ..+.+-...+.|...+..++
T Consensus 503 I~~~~~dG~~~~~~~~-~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 503 IEVMNTDGTGRRVLVE-DKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEESSSCCCEEEEE-CCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred EEEEecCCCceEEEec-cCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 9999986443322221 12222345555433 33333334456666666655
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.88 E-value=0.021 Score=55.06 Aligned_cols=203 Identities=11% Similarity=-0.038 Sum_probs=122.6
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCC-EEEEeeCCCeE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT-IFAAGSENGNL 191 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i 191 (406)
-..+..++|++.+..|+.+.-..-+|+.++.........+ . .+-.....+++.+.+. ++++-...+.|
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~---------~--~g~~~P~GlAvD~~~~~LY~tD~~~~~I 104 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV---------E--FGLDYPEGMAVDWLGKNLYWADTGTNRI 104 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE---------C--SSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE---------e--CCCCCcceEEEEeCCCEEEEEECCCCEE
Confidence 3467899999988888877644447777765432111110 0 0113456788876554 44555557889
Q ss_pred EEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC--CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceE
Q 015490 192 RVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN--RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 192 ~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
.+.+++...........-.....+++.|....|+.+.. .+.|...++.......... .......+++++++..
T Consensus 105 ~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~--- 179 (628)
T 4a0p_A 105 EVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--NVGRANGLTIDYAKRR--- 179 (628)
T ss_dssp EEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SCSSEEEEEEETTTTE---
T ss_pred EEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--CCCCcceEEEccccCE---
Confidence 99998654332222233346789999996666666552 4677777775443322222 2334678999998775
Q ss_pred EEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEE
Q 015490 270 LYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVR 335 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~ 335 (406)
+|+ +....+.|..+|+..... ..+.........+++.. +...++-...+.|...|..+++..
T Consensus 180 LY~--aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 180 LYW--TDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp EEE--EETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEE--EECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 443 335678899999876433 23333334456788765 333344344788999997666533
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.78 E-value=0.015 Score=51.45 Aligned_cols=185 Identities=10% Similarity=0.112 Sum_probs=109.6
Q ss_pred EEEEEECCCCCEEEEe------------eCCCeEEEEeCCC--cce-Eeeeecc-----CCceeEEEEcc--CCC-EEEE
Q 015490 170 QLALTFDSEGTIFAAG------------SENGNLRVFKWPS--LEI-ILNESEA-----HASVKDLSFSP--DGK-FLVS 226 (406)
Q Consensus 170 v~~~~~s~~g~~l~~~------------~~dg~i~vwd~~~--~~~-~~~~~~~-----~~~i~~~~~s~--~~~-~l~s 226 (406)
.-.+...|+|..++++ ..+|.|.++|..+ ++. ...+.+. .-....+.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3456678887655554 2689999999873 222 1122221 12566777765 454 4555
Q ss_pred EeC---CCCEEEEEcCCC--e--eeeecccCCcceEEEEEEEcCCCCceEEEEEEEc----------------CCCcEEE
Q 015490 227 LGN---RGPGRVWDLASS--A--VATPLAKENDELFASCRFSPLNNEDYVLYIAAIT----------------DRGASIV 283 (406)
Q Consensus 227 ~s~---d~~i~iwd~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------------~~~~~i~ 283 (406)
+.. +.++.+|++... . .+..+....-.....+.+.+++. +| +... ...+.|+
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~----fy-vt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH----FY-ATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE----EE-EEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC----EE-ecCCcEeCCcccccchhhccCCccEEE
Confidence 532 457888877543 2 22334433344577899999886 12 2211 1246777
Q ss_pred EEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCC-ceE--EEEeecccccceEEEEEcC-CCCeE
Q 015490 284 TWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTA-SGDISIIDSSS-LQV--RTAVKKAHLGIVTALAFSY-DSRAL 358 (406)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~-~~~--~~~~~~~~~~~v~~~~~sp-~~~~l 358 (406)
.+|... .. .+...-.....++|+||++.|+++.. .+.|+.|++.. ++. ...+. ..+....+++.+ +|++.
T Consensus 207 r~d~~~--~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 207 YYSPND--VR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp EECTTC--CE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTTCCEE
T ss_pred EEECCe--EE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCCCceEEEeCCCCcEE
Confidence 777642 22 22222244689999999998887764 68899999863 322 22332 345677899999 59988
Q ss_pred EEEECC
Q 015490 359 VSASMD 364 (406)
Q Consensus 359 ~s~s~d 364 (406)
+++..+
T Consensus 282 va~~~~ 287 (355)
T 3sre_A 282 VGCHPN 287 (355)
T ss_dssp EEEESC
T ss_pred EEecCC
Confidence 776544
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.0057 Score=53.13 Aligned_cols=160 Identities=9% Similarity=0.106 Sum_probs=107.0
Q ss_pred ceeEEEEccCCCEEEEEe-CCCCEEEEEcCCCeeee-eccc-----CCcceEEEEEE---EcCCCCceEEEEEEEc----
Q 015490 211 SVKDLSFSPDGKFLVSLG-NRGPGRVWDLASSAVAT-PLAK-----ENDELFASCRF---SPLNNEDYVLYIAAIT---- 276 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s-~d~~i~iwd~~~~~~~~-~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~~~~~---- 276 (406)
--.+++|++....+..++ ..++|..||...+.... .+.. ........+.| .|+++ |++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr----L~vv~~~~~af 89 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR----LFAVMKNAKSF 89 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE----EEEEEEETTTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc----EEEEEcccccc
Confidence 446789988666666666 78999999997554332 2221 11224578888 57643 3332221
Q ss_pred -------CCCcEEEEEeCC---CceEEEEeeec------------C-CCeEEEEEcCCCCEEEEEeCC-CcEEEEECCCc
Q 015490 277 -------DRGASIVTWNTT---TWKRIRTKQVV------------R-EPVSSFNVSADGKLLAVGTAS-GDISIIDSSSL 332 (406)
Q Consensus 277 -------~~~~~i~~~d~~---~~~~~~~~~~~------------~-~~i~~~~~sp~~~~l~~~~~d-g~i~i~d~~~~ 332 (406)
+.+..|..+|+. +++.+...... . .....++..++|+..++++.. +.|..++....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 136789999999 77765554421 1 247899999999999988888 88888887643
Q ss_pred eEEEEeec-c----cccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 333 QVRTAVKK-A----HLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 333 ~~~~~~~~-~----~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
....+.. . .....+.|+++|+|+.|++...+|.+..+|+.+.
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 2222210 1 1122569999999999888877999999998754
No 306
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.67 E-value=0.01 Score=51.49 Aligned_cols=199 Identities=8% Similarity=0.029 Sum_probs=112.2
Q ss_pred EccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC-----------
Q 015490 121 IHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN----------- 188 (406)
Q Consensus 121 ~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----------- 188 (406)
|+.++.+++... ...-+||.++..... ..++.- -.+--++++|.+|+.....
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~---------------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN---------------DTAMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE---------------EEEEEEEECSSEEEEEEECC------CCSS
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC---------------CceeeEEEcCCEEEEEECCCCcccccceec
Confidence 445778887775 223489988865332 222211 1134557888888777543
Q ss_pred ---CeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEe--CCC--CEEEEEcCCCeeeeecccCCcceEEEEEEE
Q 015490 189 ---GNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLG--NRG--PGRVWDLASSAVATPLAKENDELFASCRFS 261 (406)
Q Consensus 189 ---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s--~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 261 (406)
..|+..+++..+.. .+... ....|++++++|+... .++ .|...++.... ...+..+.. .+++
T Consensus 85 ~n~~~Iy~i~~dg~~~~-~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~-----~~~~ 153 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGST-VLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL-----FTCN 153 (302)
T ss_dssp CCSEEEEEEETTSCCCE-EEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC-----CCSE
T ss_pred cCCCeEEEEeCCCCcce-EeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc-----eEee
Confidence 36777777665432 22221 2236788899888876 333 45555664333 333332211 4567
Q ss_pred cCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCC--CcEEEEECCCceEEEEee
Q 015490 262 PLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTAS--GDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 262 ~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~ 339 (406)
++++. ++ .+......|+..++..+.....+. +... ..++|++++|+..... ..|..-++..... ..+.
T Consensus 154 ~~g~~---iy--~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt 223 (302)
T 3s25_A 154 TSDRY---FY--YNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT 223 (302)
T ss_dssp EETTE---EE--EECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS
T ss_pred EECCE---EE--EEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe
Confidence 88875 33 333457889999988765443332 2222 3466999999877654 3577777765443 2332
Q ss_pred cccccceEEEEEcCCCCeEEEE
Q 015490 340 KAHLGIVTALAFSYDSRALVSA 361 (406)
Q Consensus 340 ~~~~~~v~~~~~sp~~~~l~s~ 361 (406)
...+ ..|+|++.+|.-+
T Consensus 224 ---~~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 224 ---EANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp ---CSCE--EEEEEETTEEEEE
T ss_pred ---CCCc--ceEEECCCEEEEE
Confidence 1122 2367777777654
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.61 E-value=0.021 Score=50.56 Aligned_cols=216 Identities=15% Similarity=0.155 Sum_probs=114.3
Q ss_pred EEecCCCCceEEEEccCCCeEEEEe-----------cCCeEEEEEecccc-cceeecceeccceeeeccc-ccCcEEEEE
Q 015490 108 ELRTDSDLPYRMAIHPHGDGIICAL-----------QNSCRLFEWDEVEN-TEIRRLGVKISEKVLSQLE-NVGQQLALT 174 (406)
Q Consensus 108 ~~~~h~~~v~~~~~sp~~~~l~~~~-----------~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 174 (406)
.+.+-......++..|+|..+++++ +...+||.++..+. .....+... .. .+. ..-....+.
T Consensus 44 ~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~--g~---~~~~~~f~PhGi~ 118 (355)
T 3sre_A 44 LVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEII--GN---TLDISSFNPHGIS 118 (355)
T ss_dssp ECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEE--CS---SCCGGGCCEEEEE
T ss_pred EeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEcc--CC---CCCcCceeeeeeE
Confidence 3433344567788888776555541 24667888886532 112222211 00 001 112455666
Q ss_pred ECC--CCC--EEEEeeC--CCeEEEEeCCCcc-e---EeeeeccC-CceeEEEEccCCCEEEEEeC--------------
Q 015490 175 FDS--EGT--IFAAGSE--NGNLRVFKWPSLE-I---ILNESEAH-ASVKDLSFSPDGKFLVSLGN-------------- 229 (406)
Q Consensus 175 ~s~--~g~--~l~~~~~--dg~i~vwd~~~~~-~---~~~~~~~~-~~i~~~~~s~~~~~l~s~s~-------------- 229 (406)
+.+ ++. ++++-.. +.+|.+|+++... . +..+.+.. ...+++.+.++|++.++...
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 644 453 4444333 5678888875432 1 22222211 26789999999987766541
Q ss_pred ---CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-ceE--EEEeeecCCCe
Q 015490 230 ---RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-WKR--IRTKQVVREPV 303 (406)
Q Consensus 230 ---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-~~~--~~~~~~~~~~i 303 (406)
.+.+.-+|. ++.. .+. ..-.....++|+|+++. + .++.+..+.|+.|++.. ++. .+.+. ..+..
T Consensus 199 ~~~~g~vyr~d~--~~~~-~~~-~~l~~pNGia~spDg~~---l--Yvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~P 268 (355)
T 3sre_A 199 GLAWSFVTYYSP--NDVR-VVA-EGFDFANGINISPDGKY---V--YIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLV 268 (355)
T ss_dssp TCCCEEEEEECT--TCCE-EEE-EEESSEEEEEECTTSSE---E--EEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEE
T ss_pred cCCccEEEEEEC--CeEE-Eee-cCCcccCcceECCCCCE---E--EEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCC
Confidence 133444443 3222 221 11223578999999985 3 33445568899999853 322 22332 23556
Q ss_pred EEEEEcC-CCCEEEEEeCC-CcEEEEECC--CceEEEEe
Q 015490 304 SSFNVSA-DGKLLAVGTAS-GDISIIDSS--SLQVRTAV 338 (406)
Q Consensus 304 ~~~~~sp-~~~~l~~~~~d-g~i~i~d~~--~~~~~~~~ 338 (406)
-.+++++ +|++.+++..+ +.|..|+.. .+..+..+
T Consensus 269 DGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI 307 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRI 307 (355)
T ss_dssp EEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEE
T ss_pred ceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEE
Confidence 8899999 59877766544 345445543 24444444
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.59 E-value=0.075 Score=54.98 Aligned_cols=174 Identities=15% Similarity=0.184 Sum_probs=103.8
Q ss_pred eEEEEeCCCcceEeeeeccCC-ceeEEE---EccC-CCEEEEEe----------CCCCEEEEEcCCCeeeeecccCCcce
Q 015490 190 NLRVFKWPSLEIILNESEAHA-SVKDLS---FSPD-GKFLVSLG----------NRGPGRVWDLASSAVATPLAKENDEL 254 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~~~~~~~-~i~~~~---~s~~-~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~~~~ 254 (406)
.|++.|-.+.+.+..+.-... .+.+++ |..+ ..+|++|+ ..|.|++|++..++............
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 477777777766555443333 445544 3332 46888876 24779999997554433333333445
Q ss_pred EEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEE-eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEE--ECCC
Q 015490 255 FASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRT-KQVVREPVSSFNVSADGKLLAVGTASGDISII--DSSS 331 (406)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~--d~~~ 331 (406)
+++++-- +.+ ++++. +..|++|++...+.++. .... ..+..+.....++++++|..-..|.++ +...
T Consensus 888 v~al~~~--~g~----Lla~i---g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~ 957 (1158)
T 3ei3_A 888 VYSMVEF--NGK----LLASI---NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPME 957 (1158)
T ss_dssp EEEEEEE--TTE----EEEEE---TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTT
T ss_pred CEEEeee--CCE----EEEEc---CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC
Confidence 6555433 222 23332 57899999876554431 1112 123333333457899999887777664 4445
Q ss_pred ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 332 LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 332 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
.+....-...+..+++++.+-.++ .++.+..+|.+.+.....
T Consensus 958 ~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 958 GNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp TEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred CeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 554444433566788899887654 677788999999998865
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.56 E-value=0.014 Score=50.69 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=94.4
Q ss_pred CCCEEEEeeCC----CeEEEEeCCCcceEee--eeccCCceeEEEEccCCCEEEEEeCC------CCEEEEEcCCCeeee
Q 015490 178 EGTIFAAGSEN----GNLRVFKWPSLEIILN--ESEAHASVKDLSFSPDGKFLVSLGNR------GPGRVWDLASSAVAT 245 (406)
Q Consensus 178 ~g~~l~~~~~d----g~i~vwd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~s~d------~~i~iwd~~~~~~~~ 245 (406)
++.+++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 66777888754 6789999887654322 1111111122222 66677777654 468999998775433
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-------CcEEEEEeCCCceEEEEeee--cCCCeEEEEEcCCCCEEE
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDR-------GASIVTWNTTTWKRIRTKQV--VREPVSSFNVSADGKLLA 316 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~ 316 (406)
.-.......-.++... ++. +|++..... ...+.+||+.+.+-...-.. ....-..+.+ +++.++
T Consensus 133 ~~~~p~~r~~~~~~~~-~~~----iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 205 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA-NGL----IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFA 205 (306)
T ss_dssp ECCCSSCCBSCEEEEE-TTE----EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred CCCCcCCcceeEEEEE-CCE----EEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEE
Confidence 2111111111112222 332 333221111 35588999887643222111 1111122222 566777
Q ss_pred EEeCC-----CcEEEEECCCceEEEEeeccc-ccceEEEEEcCCCCeEEEEECC-----CcEEEEEecCC
Q 015490 317 VGTAS-----GDISIIDSSSLQVRTAVKKAH-LGIVTALAFSYDSRALVSASMD-----SSVRVTVIEDK 375 (406)
Q Consensus 317 ~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~~~~ 375 (406)
.|+.+ ..+.+||+.+.+-...-.... ......+.+ +++.++.|+.+ ..+.+||+.+.
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 76653 458999998765332211011 111222222 67777888754 45788888764
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.48 E-value=0.015 Score=51.69 Aligned_cols=196 Identities=14% Similarity=0.160 Sum_probs=103.8
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcce--Eeeee---ccCCceeEEEEccC---CCEEEEEeC-C-----CCE
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEI--ILNES---EAHASVKDLSFSPD---GKFLVSLGN-R-----GPG 233 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~--~~~~~---~~~~~i~~~~~s~~---~~~l~s~s~-d-----~~i 233 (406)
.....++|.|+|+++++ ..+|.|++++ +++. +..+. ........++|+|+ +..|+++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34678999999986555 5679999998 3432 11111 12336789999998 555555433 2 568
Q ss_pred EEEEcCCCe-----ee-eecc--cCCcceEEEEEEEcCCCCceEEEEEEEcC------------CCcEEEEEeCCCc---
Q 015490 234 RVWDLASSA-----VA-TPLA--KENDELFASCRFSPLNNEDYVLYIAAITD------------RGASIVTWNTTTW--- 290 (406)
Q Consensus 234 ~iwd~~~~~-----~~-~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~i~~~d~~~~--- 290 (406)
..++...+. .+ ..+. .........++|.|++. +|+. .++ ..+.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~----Lyv~-~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~ 182 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM----LYVT-TGEVYERELAQDLASLGGKILRLTPEGEPAP 182 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC----EEEE-CCCTTCGGGGGCTTCSSSEEEEECTTSSBCT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC----EEEE-ECCCCCCccccCCCCCceEEEEEcCCCCCCC
Confidence 888876431 11 1122 11111235789999985 3333 221 1256777776530
Q ss_pred ---------eEEEEe-eecCCCeEEEEEcC-CCCEEEEEeCCCc--------EEEEECCC----------------ceEE
Q 015490 291 ---------KRIRTK-QVVREPVSSFNVSA-DGKLLAVGTASGD--------ISIIDSSS----------------LQVR 335 (406)
Q Consensus 291 ---------~~~~~~-~~~~~~i~~~~~sp-~~~~l~~~~~dg~--------i~i~d~~~----------------~~~~ 335 (406)
.....+ .++ .....++|+| +++++++-...+. |.+..... ..+.
T Consensus 183 ~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 000111 122 2356789999 6665554333222 33322111 0111
Q ss_pred EEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 336 TAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 336 ~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
..+ .+......++| .+|.++++.-..+.|...+++..
T Consensus 262 ~~~--~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 262 YFW--PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp EEC--TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred Eec--CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 122 12234567777 46766666556667777777644
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.46 E-value=0.0094 Score=51.62 Aligned_cols=184 Identities=10% Similarity=0.059 Sum_probs=92.6
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCcc---eEe--eeeccCCceeEEEEccCCCEEEEEeCC-----CCEEEEEcCCCe
Q 015490 178 EGTIFAAGSEN-----GNLRVFKWPSLE---IIL--NESEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVWDLASSA 242 (406)
Q Consensus 178 ~g~~l~~~~~d-----g~i~vwd~~~~~---~~~--~~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~~ 242 (406)
++++++.|+.+ ..+.+||..+.+ -.. .+......-..+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56777787754 468999987765 222 22111111122222 56666666643 358899988765
Q ss_pred eee--ecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEcCCCC
Q 015490 243 VAT--PLAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVSADGK 313 (406)
Q Consensus 243 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~sp~~~ 313 (406)
-.. .+...... . ++... ++. +|+ .++. ...+..||+.+.+-... +.........+.+ +++
T Consensus 140 W~~~~~~p~~r~~-~-~~~~~-~~~----iyv--~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 208 (301)
T 2vpj_A 140 WSMLGDMQTAREG-A-GLVVA-SGV----IYC--LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDH 208 (301)
T ss_dssp EEEEEECSSCCBS-C-EEEEE-TTE----EEE--ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred EEECCCCCCCccc-c-eEEEE-CCE----EEE--ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCE
Confidence 432 22211111 1 12222 332 333 2322 25688999877543322 1111111222222 566
Q ss_pred EEEEEeCC-----CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC-----CcEEEEEecCC
Q 015490 314 LLAVGTAS-----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-----SSVRVTVIEDK 375 (406)
Q Consensus 314 ~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~~~~ 375 (406)
.++.|+.+ ..+.+||+.+.+-...-.......-.+++ .-+++.++.|+.+ ..+.+||+++.
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 77777664 46899999876543322101111111222 2267777777765 35778887664
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.46 E-value=0.067 Score=49.28 Aligned_cols=112 Identities=11% Similarity=0.209 Sum_probs=59.6
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEeeC---
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAGSE--- 187 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~--- 187 (406)
.....|+|.|+|+.+++-..+ .+|+.++..++.......+ ...+...........++|+|+ +..|++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~g-g~I~~~~~~~g~~~~~~~~---~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERAT-GKILRVNPESGSVKTVFQV---PEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTT-CEEEEECTTTCCEEEEEEC---TTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEEcCC-CEEEEEECCCCcEeEEecC---CccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 456799999999977665433 2677676533322111111 000001113466889999995 444444332
Q ss_pred ----------CCeEEEEeCCCc-------ceEee-eecc-CCceeEEEEccCCCEEEEEeC
Q 015490 188 ----------NGNLRVFKWPSL-------EIILN-ESEA-HASVKDLSFSPDGKFLVSLGN 229 (406)
Q Consensus 188 ----------dg~i~vwd~~~~-------~~~~~-~~~~-~~~i~~~~~s~~~~~l~s~s~ 229 (406)
...|.-|+.... +.+.. +... ......|+|.|||.+.++.+.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 11111 2111 124688999999997776553
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.26 E-value=0.092 Score=46.60 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=122.5
Q ss_pred CCceEEEEccCCC-eEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEe-eC-
Q 015490 114 DLPYRMAIHPHGD-GIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAG-SE- 187 (406)
Q Consensus 114 ~~v~~~~~sp~~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~-~~- 187 (406)
.....|+|.|+|+ .+++-..+ +|+.++.. +.....+. ...............++|+|+ +..|+.. +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G--~i~~~~~~-g~~~~~~~----~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGG--ELRHWQAG-KGLSAPLS----GVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTT--EEEEEETT-TEECCCCB----SCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCc--eEEEEeCC-CceeeEec----CCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC
Confidence 3568999999999 55544343 66666642 21111110 000001123356789999996 4444443 22
Q ss_pred ------CCeEEEEeCCCc--c--eEe----eeec---cCCceeEEEEccCCCEEEEEeCC-------------CCEEEEE
Q 015490 188 ------NGNLRVFKWPSL--E--IIL----NESE---AHASVKDLSFSPDGKFLVSLGNR-------------GPGRVWD 237 (406)
Q Consensus 188 ------dg~i~vwd~~~~--~--~~~----~~~~---~~~~i~~~~~s~~~~~l~s~s~d-------------~~i~iwd 237 (406)
...|..|++... . ... .+.. ....-..++|.|||.+.++.+.. +.|.-++
T Consensus 91 ~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 91 GDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp CSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 235666666432 1 111 1111 11124679999999655554432 3466666
Q ss_pred cCCCe------------eeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-CcEEEEEeC--------CC-------
Q 015490 238 LASSA------------VATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR-GASIVTWNT--------TT------- 289 (406)
Q Consensus 238 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~i~~~d~--------~~------- 289 (406)
....- ....+.... .....++|+|.... +|+.-.+.. ...|.+... ..
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~---l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~ 246 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA---LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSG 246 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE---EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTS
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCC---EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCC
Confidence 54210 111111112 23568999994332 444333211 112322110 00
Q ss_pred --------------ceEEEEeeecCCCeEEEEEcC-------CCCEEEEEeCCCcEEEEECCCceEEEE--eecccccce
Q 015490 290 --------------WKRIRTKQVVREPVSSFNVSA-------DGKLLAVGTASGDISIIDSSSLQVRTA--VKKAHLGIV 346 (406)
Q Consensus 290 --------------~~~~~~~~~~~~~i~~~~~sp-------~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~v 346 (406)
..++..+..+ .....+.|.. +|+++++....+.|...++..++.... +.......+
T Consensus 247 ~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp 325 (353)
T 2g8s_A 247 FKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI 325 (353)
T ss_dssp SCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCE
T ss_pred CccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCce
Confidence 0111122222 3467778764 466766666678888888876554332 211223478
Q ss_pred EEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 347 TALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 347 ~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
..+++.|||.++++.. +..=+||.+.
T Consensus 326 ~~v~~~pdG~lyv~td-~~~g~I~ri~ 351 (353)
T 2g8s_A 326 RDVRTGPDGYLYVLTD-ESSGELLKVS 351 (353)
T ss_dssp EEEEECTTSCEEEEEC-STTEEEEEEE
T ss_pred eEEEECCCCcEEEEEe-CCCCEEEEEe
Confidence 9999999998666432 2233566653
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.25 E-value=0.091 Score=46.27 Aligned_cols=241 Identities=11% Similarity=0.143 Sum_probs=119.4
Q ss_pred EecCCCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC---CCEEEEe
Q 015490 109 LRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE---GTIFAAG 185 (406)
Q Consensus 109 ~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~ 185 (406)
+...-.....|+|.|+|+.+++-. ...+|+.++...+.. ..+.. ..............++++|+ +..|+..
T Consensus 27 va~gL~~P~~ia~~pdG~llVter-~~G~I~~v~~~~g~~-~~v~~----~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSR-DEATITRVDAKTGRK-TELGE----VPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEET-TTCEEEEECTTTCCE-EEEEE----CTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred eecCCCCceEEEEcCCCcEEEEEe-cCCEEEEEECCCCcE-eeecc----cCceeecCCCCceeeEeccccccCCEEEEE
Confidence 333445678999999998666553 244677676443321 11100 00001224467889999995 3344332
Q ss_pred ---eCCCeEEEEeCCCc----------ceEe-eeec-cCCceeEEEEccCCCEEEEEeC-------------CCCEEEEE
Q 015490 186 ---SENGNLRVFKWPSL----------EIIL-NESE-AHASVKDLSFSPDGKFLVSLGN-------------RGPGRVWD 237 (406)
Q Consensus 186 ---~~dg~i~vwd~~~~----------~~~~-~~~~-~~~~i~~~~~s~~~~~l~s~s~-------------d~~i~iwd 237 (406)
..++.|.-|.+..+ +.+. .+.. ....-..|.|.|||.+.++.+. .|.|.-.+
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~ 180 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMT 180 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEEC
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEe
Confidence 23456666665441 1111 1211 1113467999999987776543 24444444
Q ss_pred cCCCe-------eeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC--cEEEEEeC--------CCc--------eE
Q 015490 238 LASSA-------VATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG--ASIVTWNT--------TTW--------KR 292 (406)
Q Consensus 238 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~i~~~d~--------~~~--------~~ 292 (406)
....- ....+...+.. ...++|+|++. +++.-. +.+ ..|..... ..+ .+
T Consensus 181 ~dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~----L~~~d~-g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P 254 (347)
T 3das_A 181 PDGEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQR----LFASEF-GQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDP 254 (347)
T ss_dssp TTSSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCC----EEEEEC-CSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCC
T ss_pred CCCCccCCCCCCCCeEEeeCCCC-cceEEECCCCC----EEEEec-CCCCCceeeEEcCCCEecCCcccCCCCCccccCC
Confidence 43210 00111112222 34688998765 333322 222 22332211 011 01
Q ss_pred EEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEE---EEeecccccceEEEEEcCCCCeEEEEE
Q 015490 293 IRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVR---TAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 293 ~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
+..+..+......++|. +|..+...-..+.|....+...... ..+..+..+.+..++..|||.++++..
T Consensus 255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 255 VAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp SEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 12222111245667776 3555555555666766676554321 122223446789999999998766644
No 315
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.24 E-value=0.11 Score=53.83 Aligned_cols=240 Identities=10% Similarity=0.088 Sum_probs=137.2
Q ss_pred EEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 015490 118 RMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWP 197 (406)
Q Consensus 118 ~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~ 197 (406)
+.-.+|..+.++.=.+.+++|++++.. ..+..+.....|.-=.|-.+. .|+..+ +..|.-|++.
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnl~~k--------------~klks~~~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~ 133 (1630)
T 1xi4_A 70 SAIMNPASKVIALKAGKTLQIFNIEMK--------------SKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSME 133 (1630)
T ss_pred hhccCCCcceEEEecCCeEEEeehHHh--------------hhhcccccCCCceEEEecCCC-eeEEEc-CCeEEEeccC
Confidence 345678777776666888899887743 223333344455555665443 343333 4579999996
Q ss_pred CcceE-eeeecc----CCceeEEEEccCCCEEEEEe-------CCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCC
Q 015490 198 SLEII-LNESEA----HASVKDLSFSPDGKFLVSLG-------NRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNN 265 (406)
Q Consensus 198 ~~~~~-~~~~~~----~~~i~~~~~s~~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (406)
..... ..+..| ...|..-.-+++.++++..+ -.|.+.+|..+.+. .+.+.+|.. ....+.......
T Consensus 134 ~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~-~F~~~~~~~~~~ 211 (1630)
T 1xi4_A 134 GESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA-SFAQFKMEGNAE 211 (1630)
T ss_pred CCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHh-hhheeccCCCCC
Confidence 43322 222222 12666777788888877554 24778888886432 233333321 111121111111
Q ss_pred CceEEEEEEEc-CCCcEEEEEeCCCc---eE------EEEeeec---CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q 015490 266 EDYVLYIAAIT-DRGASIVTWNTTTW---KR------IRTKQVV---REPVSSFNVSADGKLLAVGTASGDISIIDSSSL 332 (406)
Q Consensus 266 ~~~~l~~~~~~-~~~~~i~~~d~~~~---~~------~~~~~~~---~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~ 332 (406)
...+++.+.. ...+.+++.++... .. +..+... ..-..++..|+.-..+..-+.-|.+.+||+.++
T Consensus 212 -~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 212 -ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred -CceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc
Confidence 1123333322 23468888887542 11 1111111 122346778888788888899999999999999
Q ss_pred eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 333 QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 333 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
..+..-. -...+|...+-.....-++.....|.|.--.+.....
T Consensus 291 ~~i~~~r-is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 291 TCIYMNR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred hhhhhcc-ccCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 8876653 4445555444444434455566888888877777655
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.21 E-value=0.082 Score=46.95 Aligned_cols=198 Identities=14% Similarity=0.125 Sum_probs=106.9
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-eEeeee---ccCCceeEEEEccC---CCEEEEEeC----C----CC
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLE-IILNES---EAHASVKDLSFSPD---GKFLVSLGN----R----GP 232 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~-~~~~~~---~~~~~i~~~~~s~~---~~~l~s~s~----d----~~ 232 (406)
.....++|.|+|+++++ ..+|.|++++ .+++ .+..+. ........|+++|+ +..|+++.. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 45678999999985554 5669999997 4444 222111 12236889999997 555554432 2 56
Q ss_pred EEEEEcCCC-------eee-eecccCCcceEEEEEEEcCCCCceEEEEEEEcC------------CCcEEEEEeCCCc--
Q 015490 233 GRVWDLASS-------AVA-TPLAKENDELFASCRFSPLNNEDYVLYIAAITD------------RGASIVTWNTTTW-- 290 (406)
Q Consensus 233 i~iwd~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~i~~~d~~~~-- 290 (406)
|..|+.... +.+ ..+..........++|.|++. ||+. .++ ..+.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~----Lyvt-~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM----LYIT-TGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC----EEEE-CCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc----EEEE-ECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 777776543 111 112211111234689999986 3333 222 1356777766532
Q ss_pred -------eEEEEeeecCCCeEEEEEcC-CCCEEEEEeCCC---cEEEEECCC--------c--------eEEEEeecccc
Q 015490 291 -------KRIRTKQVVREPVSSFNVSA-DGKLLAVGTASG---DISIIDSSS--------L--------QVRTAVKKAHL 343 (406)
Q Consensus 291 -------~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~dg---~i~i~d~~~--------~--------~~~~~~~~~~~ 343 (406)
..+. ..++. ....++|+| +|+++++-...+ .|.+..... + .++..+. ...
T Consensus 182 ~~npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ 258 (354)
T 3a9g_A 182 ADNPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG-SET 258 (354)
T ss_dssp TTSSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TCC
T ss_pred CCCCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC-CCC
Confidence 1111 12232 346899999 666555433222 243332111 0 1112221 112
Q ss_pred cceEEEEEc-------CCCCeEEEEECCCcEEEEEecCC
Q 015490 344 GIVTALAFS-------YDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 344 ~~v~~~~~s-------p~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
.....++|. .+|.++++.-..+.|...+++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 356788883 56777766666678888888753
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.20 E-value=0.074 Score=45.89 Aligned_cols=147 Identities=15% Similarity=0.174 Sum_probs=73.2
Q ss_pred CCCEEEEeeCCC-----eEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeC-------CCCEEEEEcCCCeee
Q 015490 178 EGTIFAAGSENG-----NLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGN-------RGPGRVWDLASSAVA 244 (406)
Q Consensus 178 ~g~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~-------d~~i~iwd~~~~~~~ 244 (406)
++++++.|+.++ .+.+||+.+.+-...-..... .-.+++. -+++.++.|+. -..+.+||+.+.+-.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 567777777553 588899877654322111111 1112222 25666666654 235889999876543
Q ss_pred eecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEcCCCCEEEE
Q 015490 245 TPLAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVSADGKLLAV 317 (406)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~ 317 (406)
..-.......-.++... ++. +++ .++. ...+.+||+.+.+-... +.........+. -+++.++.
T Consensus 187 ~~~~~p~~r~~~~~~~~-~~~----iyv--~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~ 257 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVGVL-NNL----LYA--VGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVV 257 (302)
T ss_dssp EECCCSSCCBSCEEEEE-TTE----EEE--ECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEE
T ss_pred ECCCCccccccccEEEE-CCE----EEE--ECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEE
Confidence 32111111111122222 222 333 3332 24688999887543222 111111112222 25677777
Q ss_pred EeCCC-----cEEEEECCCceE
Q 015490 318 GTASG-----DISIIDSSSLQV 334 (406)
Q Consensus 318 ~~~dg-----~i~i~d~~~~~~ 334 (406)
|+.++ .+.+||+.+.+-
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTEE
T ss_pred CCcCCCcccccEEEEcCCCCeE
Confidence 77643 489999887653
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.16 E-value=0.07 Score=46.16 Aligned_cols=146 Identities=11% Similarity=0.088 Sum_probs=74.1
Q ss_pred CCCEEEEeeCC------CeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeC---------CCCEEEEEcCCC
Q 015490 178 EGTIFAAGSEN------GNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGN---------RGPGRVWDLASS 241 (406)
Q Consensus 178 ~g~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~---------d~~i~iwd~~~~ 241 (406)
++++++.|+.+ ..+.+||..+.+-...-..... .-.+++. -+++.++.|+. -..+.+||+.+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 66777887765 4689999887654322111111 1112222 25666666653 345889999887
Q ss_pred eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEE--EeeecCCCeEEEEEcCCCCE
Q 015490 242 AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIR--TKQVVREPVSSFNVSADGKL 314 (406)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~--~~~~~~~~i~~~~~sp~~~~ 314 (406)
+-...-.......-.++... +++ +++ .++. -..+.+||+.+.+-.. .+........++.+ +++.
T Consensus 180 ~W~~~~~~p~~r~~~~~~~~-~~~----i~v--~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 250 (306)
T 3ii7_A 180 TWTELCPMIEARKNHGLVFV-KDK----IFA--VGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIV 250 (306)
T ss_dssp EEEEECCCSSCCBSCEEEEE-TTE----EEE--ECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEE
T ss_pred eEEECCCccchhhcceEEEE-CCE----EEE--EeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEE
Confidence 54332111111111122222 222 232 2222 2468899987754322 11111122233333 5777
Q ss_pred EEEEeCC-----CcEEEEECCCce
Q 015490 315 LAVGTAS-----GDISIIDSSSLQ 333 (406)
Q Consensus 315 l~~~~~d-----g~i~i~d~~~~~ 333 (406)
++.|+.+ ..+.+||..+.+
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEEeCcCCCeeeeeEEEEcCCCCe
Confidence 7788754 468899988754
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.16 E-value=0.037 Score=49.70 Aligned_cols=149 Identities=18% Similarity=0.201 Sum_probs=90.0
Q ss_pred EEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeeccc--ccCcEEEEEECCCCCEEEEeeCCCeEEEEeCC
Q 015490 120 AIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLE--NVGQQLALTFDSEGTIFAAGSENGNLRVFKWP 197 (406)
Q Consensus 120 ~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~ 197 (406)
..+.+|..++++.++.+|.-.+... . ..+.+..-. ....+..+..||+|++||..+. ..|.|..+.
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~--~---------~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP 94 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTD--S---------LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVP 94 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTC--S---------SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECC
T ss_pred EEEcCCCEEEEEECCEEEEEECCCC--C---------cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEec
Confidence 3445666677666666665443321 1 111121111 1235677999999999998765 589998886
Q ss_pred Ccc------------eEeeeec------cCCceeEEEEccC---CCEEEEEeCCCCEEEEEcCCCe--eeeecccC----
Q 015490 198 SLE------------IILNESE------AHASVKDLSFSPD---GKFLVSLGNRGPGRVWDLASSA--VATPLAKE---- 250 (406)
Q Consensus 198 ~~~------------~~~~~~~------~~~~i~~~~~s~~---~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~---- 250 (406)
.+. ....+.- ...+|..+.|||- +..|++-..|+.|++||+.... +. .+...
T Consensus 95 ~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~f 173 (452)
T 3pbp_A 95 WGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSF 173 (452)
T ss_dssp TTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEE
T ss_pred CccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccccc
Confidence 322 0111111 1347999999994 5689999999999999997522 11 22111
Q ss_pred ----CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEE
Q 015490 251 ----NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTW 285 (406)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ 285 (406)
....+.+++|.+++-. +|+ ++...+|.|+-.
T Consensus 174 g~d~~~~ev~S~~Fg~~~lT---LYv-l~~t~~GDIYAl 208 (452)
T 3pbp_A 174 GLDARVNDITDLEFSKDGLT---LYC-LNTTEGGDIFAF 208 (452)
T ss_dssp ESCSSCCCEEEEEECTTSSC---EEE-EECTTSCEEEEE
T ss_pred CCCcccceEEEEEEcCCCcE---EEE-EecCCCCCEEEE
Confidence 1134778999996543 443 344567777654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.11 E-value=0.02 Score=51.41 Aligned_cols=119 Identities=14% Similarity=0.103 Sum_probs=75.9
Q ss_pred CceEEEEccCCCeEEEEecCCeEEEEEecccccce-----eecceeccceeeeccc--ccCcEEEEEECCCC---CEEEE
Q 015490 115 LPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEI-----RRLGVKISEKVLSQLE--NVGQQLALTFDSEG---TIFAA 184 (406)
Q Consensus 115 ~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~g---~~l~~ 184 (406)
.|..+..+|+|++|+..++.++.|..+........ ..+.. ..-.+.... ...+|..+.|+|-+ ..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~--~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQI--FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEE--EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccce--eEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 67889999999999999999888877762211000 00000 000011111 24779999999954 67888
Q ss_pred eeCCCeEEEEeCCCcc-eEeeee------c---cCCceeEEEEccCCCEEEEEe--CCCCEEE
Q 015490 185 GSENGNLRVFKWPSLE-IILNES------E---AHASVKDLSFSPDGKFLVSLG--NRGPGRV 235 (406)
Q Consensus 185 ~~~dg~i~vwd~~~~~-~~~~~~------~---~~~~i~~~~~s~~~~~l~s~s--~d~~i~i 235 (406)
-..|+.|++||+.... ....+. + ....|.+++|..++-.|...+ +.|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 8999999999997521 111111 1 113688999999877676655 6776653
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.09 E-value=0.056 Score=47.64 Aligned_cols=170 Identities=16% Similarity=0.097 Sum_probs=96.2
Q ss_pred eeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeee--eecc---cCCcceEEEEEEEcCCCCceEEEEEEEcCCC
Q 015490 205 ESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVA--TPLA---KENDELFASCRFSPLNNEDYVLYIAAITDRG 279 (406)
Q Consensus 205 ~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 279 (406)
+...-...+.|+|.|||+++++--..|.|++++..+++.. ..+. .........++++|+-..+..+|+..+...+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3333446789999999987666555899999987655432 2121 1223456789999963222246665554556
Q ss_pred cEEEEEeCCC----------ceEEE-Eeee-cCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCce-
Q 015490 280 ASIVTWNTTT----------WKRIR-TKQV-VREPVSSFNVSADGKLLAVGTA-------------SGDISIIDSSSLQ- 333 (406)
Q Consensus 280 ~~i~~~d~~~----------~~~~~-~~~~-~~~~i~~~~~sp~~~~l~~~~~-------------dg~i~i~d~~~~~- 333 (406)
..|.-|.... .+.+. .+.. ..+....+.|.|||.+.++.+. .|.|.-++....-
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 6777776543 11121 2211 1233467999999986666432 3556656654220
Q ss_pred ------EEEEeecccccceEEEEEcCCCCeEEEE-ECCCcEEEEEecCC
Q 015490 334 ------VRTAVKKAHLGIVTALAFSYDSRALVSA-SMDSSVRVTVIEDK 375 (406)
Q Consensus 334 ------~~~~~~~~~~~~v~~~~~sp~~~~l~s~-s~dg~i~iw~~~~~ 375 (406)
....+..+|. ....++|+|+|.++++- +.|+.=.|-.+..+
T Consensus 187 ~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G 234 (347)
T 3das_A 187 PGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPG 234 (347)
T ss_dssp TTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTT
T ss_pred CCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCC
Confidence 0112222554 35689999998766543 23443445445444
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.07 E-value=0.041 Score=47.51 Aligned_cols=190 Identities=14% Similarity=0.075 Sum_probs=93.1
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCcceEeeeeccCCc-eeEEEEccCCCEEEEEeCCC-----CEEEEEcCCCeeeee
Q 015490 178 EGTIFAAGSEN-----GNLRVFKWPSLEIILNESEAHAS-VKDLSFSPDGKFLVSLGNRG-----PGRVWDLASSAVATP 246 (406)
Q Consensus 178 ~g~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~ 246 (406)
++.+++.|+.+ ..+.+||..+.+-...-...... -.+++. -+++.++.|+.++ .+.+||+.+.+-...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 56677777654 35889998776533221111111 112222 2567777776543 477889887654332
Q ss_pred cccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEcCCCCEEEEEe
Q 015490 247 LAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVSADGKLLAVGT 319 (406)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~ 319 (406)
-.......-.+++.. ++. +|++..... ...+..||+.+.+-... +.........+.+ +++.++.|+
T Consensus 140 ~~~p~~r~~~~~~~~-~~~----iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 212 (302)
T 2xn4_A 140 APMNTRRSSVGVGVV-GGL----LYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGG 212 (302)
T ss_dssp CCCSSCCBSCEEEEE-TTE----EEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CCCCCcccCceEEEE-CCE----EEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECC
Confidence 111111111122222 222 333221111 24588999877543222 2111112222222 567777776
Q ss_pred CC-----CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC-----cEEEEEecCCc
Q 015490 320 AS-----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS-----SVRVTVIEDKK 376 (406)
Q Consensus 320 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg-----~i~iw~~~~~~ 376 (406)
.+ ..+.+||..+.+-...-.......-.+++. -+++.++.|+.++ .+.+||+.+.+
T Consensus 213 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 54 368999998765433211011111112222 2677777777653 48888887653
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.03 E-value=0.06 Score=46.41 Aligned_cols=189 Identities=14% Similarity=0.117 Sum_probs=92.7
Q ss_pred CCCEEEEee-CC-----CeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCC-----CCEEEEEcCCCe---e
Q 015490 178 EGTIFAAGS-EN-----GNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVWDLASSA---V 243 (406)
Q Consensus 178 ~g~~l~~~~-~d-----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~~---~ 243 (406)
++.+++.|+ .+ ..+.+||..+.+-...-..............+++.++.|+.+ ..+.+||..+.+ -
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 455666666 32 368899987765432211111111111222356677777654 468999988765 2
Q ss_pred ee--ecccCCcceEEEEEEEcCCCCceEEEEEEEcCC---CcEEEEEeCCCceE--EEEeeecCCCeEEEEEcCCCCEEE
Q 015490 244 AT--PLAKENDELFASCRFSPLNNEDYVLYIAAITDR---GASIVTWNTTTWKR--IRTKQVVREPVSSFNVSADGKLLA 316 (406)
Q Consensus 244 ~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~i~~~d~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~ 316 (406)
.. .+...... . ++... ++. +|++..... ...+.+||+.+.+- +..+......-..+.+ +++.++
T Consensus 94 ~~~~~~p~~r~~-~-~~~~~-~~~----lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv 164 (301)
T 2vpj_A 94 YSVAPMNVRRGL-A-GATTL-GDM----IYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYC 164 (301)
T ss_dssp EEECCCSSCCBS-C-EEEEE-TTE----EEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEE
T ss_pred EECCCCCCCccc-e-eEEEE-CCE----EEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEE
Confidence 22 22211111 1 12222 332 333221111 24688999876543 2222211112222222 577777
Q ss_pred EEeCC-----CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC-----CcEEEEEecCCc
Q 015490 317 VGTAS-----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-----SSVRVTVIEDKK 376 (406)
Q Consensus 317 ~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~~~~~ 376 (406)
.|+.+ ..+.+||..+.+-...-.......-.++.. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 77654 458999988765433211011111112222 256777777754 468888887653
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.02 E-value=0.11 Score=45.11 Aligned_cols=190 Identities=11% Similarity=0.050 Sum_probs=91.5
Q ss_pred ECCCCCEEEEeeC----C-------CeEEEEeCCCcceEeeeeccCCce-eEEEEccCCCEEEEEeCC--------CCEE
Q 015490 175 FDSEGTIFAAGSE----N-------GNLRVFKWPSLEIILNESEAHASV-KDLSFSPDGKFLVSLGNR--------GPGR 234 (406)
Q Consensus 175 ~s~~g~~l~~~~~----d-------g~i~vwd~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~s~s~d--------~~i~ 234 (406)
...++++++.|+. + ..+.+||..+.+-...-....... .+++.. +++.++.|+.+ ..+.
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEE
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEE
Confidence 3457788888873 1 137888987765432111111111 122222 56666666632 4588
Q ss_pred EEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC------CcEEEEEeCCCceEEEE--eeecCCCeEEE
Q 015490 235 VWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR------GASIVTWNTTTWKRIRT--KQVVREPVSSF 306 (406)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~i~~~d~~~~~~~~~--~~~~~~~i~~~ 306 (406)
+||..+.+-...-.......-.+++. -+++ +|+ .++. -..+.+||..+.+-... +......-.++
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~----iyv--~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 193 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGHTVLS-HMDL----VYV--IGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT 193 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEE-ETTE----EEE--ECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred EECCCCCcEeECCCCCCcccceeEEE-ECCE----EEE--EeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE
Confidence 99998765333211111111111222 2332 333 2322 24688999887543221 11111112222
Q ss_pred EEcCCCCEEEEEeCCC-----cEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECCC--------------cE
Q 015490 307 NVSADGKLLAVGTASG-----DISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDS--------------SV 367 (406)
Q Consensus 307 ~~sp~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg--------------~i 367 (406)
.+ +++.++.|+.++ .+.+||+.+.+-...-.......-.+++. -+++.++.|+.++ .+
T Consensus 194 ~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v 270 (315)
T 4asc_A 194 VH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDI 270 (315)
T ss_dssp EE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcE
Confidence 22 567777777644 58899998765433221011111112222 2567777777532 36
Q ss_pred EEEEecCC
Q 015490 368 RVTVIEDK 375 (406)
Q Consensus 368 ~iw~~~~~ 375 (406)
.+||+++.
T Consensus 271 ~~yd~~~~ 278 (315)
T 4asc_A 271 WRYNEEEK 278 (315)
T ss_dssp EEEETTTT
T ss_pred EEecCCCC
Confidence 67777654
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.02 E-value=0.056 Score=46.89 Aligned_cols=186 Identities=11% Similarity=0.053 Sum_probs=92.2
Q ss_pred CCCEEEEeeC----C-----CeEEEEeCCCcceEeee--eccCCceeEEEEccCCCEEEEEeCC-----CCEEEEEcCCC
Q 015490 178 EGTIFAAGSE----N-----GNLRVFKWPSLEIILNE--SEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVWDLASS 241 (406)
Q Consensus 178 ~g~~l~~~~~----d-----g~i~vwd~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~ 241 (406)
++++++.|+. + ..+.+||..+.+-...- .........+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 6677777765 2 46889998776533221 111112122222 56666666543 46889999876
Q ss_pred eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEcCCCCE
Q 015490 242 AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVSADGKL 314 (406)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~sp~~~~ 314 (406)
+-...-.......-.++... ++. +|++ ++. ...+..||+.+.+-... +.........+.+ +++.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~-~~~----iyv~--GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 218 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL-NRL----LYAV--GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCI 218 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE-TTE----EEEE--CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred eEeECCCCCccccceEEEEE-CCE----EEEE--eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEE
Confidence 54332111111111122222 222 3332 222 24688899877543221 1111112222333 5677
Q ss_pred EEEEeCC-----CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC-----CcEEEEEecCC
Q 015490 315 LAVGTAS-----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD-----SSVRVTVIEDK 375 (406)
Q Consensus 315 l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-----g~i~iw~~~~~ 375 (406)
++.|+.+ ..+.+||+.+.+-...-.......-.+++. -+++.++.|+.+ ..+.+||+.+.
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 7777654 469999998765433211011111112222 256777777754 35778887764
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.97 E-value=0.026 Score=50.12 Aligned_cols=56 Identities=7% Similarity=0.064 Sum_probs=28.8
Q ss_pred cEEEEECCCce--EEEEeecccccceEEEEEcCCCCeEEEEECCC------cEEEEEecCCcCCCCc
Q 015490 323 DISIIDSSSLQ--VRTAVKKAHLGIVTALAFSYDSRALVSASMDS------SVRVTVIEDKKKSGGL 381 (406)
Q Consensus 323 ~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg------~i~iw~~~~~~~~~~~ 381 (406)
.+.+||+.+.+ .+..+.. .... ..+...+++.++.|+.++ .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~-~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQ-GRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSS-CCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCC-Cccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 57889987644 3333321 1111 112234678888888653 3666688887765443
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.91 E-value=0.18 Score=43.65 Aligned_cols=146 Identities=12% Similarity=0.063 Sum_probs=73.2
Q ss_pred CCCEEEEeeCC-----CeEEEEeCCCcceEee--eeccCCceeEEEEccCCCEEEEEeCC-----CCEEEEEcCCCeeee
Q 015490 178 EGTIFAAGSEN-----GNLRVFKWPSLEIILN--ESEAHASVKDLSFSPDGKFLVSLGNR-----GPGRVWDLASSAVAT 245 (406)
Q Consensus 178 ~g~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 245 (406)
++++++.|+.+ ..+.+||..+.+-... +......-..+.+ +++.++.|+.+ ..+.+||+.+.+-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 66777777643 4688999877654322 1111111122222 56666666654 468899998765433
Q ss_pred ecccCCcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEcCCCCEEEEE
Q 015490 246 PLAKENDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVSADGKLLAVG 318 (406)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~ 318 (406)
.-.......-.++... ++. +++ .++. ...+.+||+.+.+-... +.........+.+ +++.++.|
T Consensus 199 ~~~~p~~r~~~~~~~~-~~~----iyv--~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 269 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL-HNC----IYA--AGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLG 269 (308)
T ss_dssp CCCCSSCCBSCEEEEE-TTE----EEE--ECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CCCCCCccccceEEEE-CCE----EEE--EeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEc
Confidence 2111111111122222 222 333 3332 25688999887543221 1111111222222 56777777
Q ss_pred eCC-----CcEEEEECCCceE
Q 015490 319 TAS-----GDISIIDSSSLQV 334 (406)
Q Consensus 319 ~~d-----g~i~i~d~~~~~~ 334 (406)
+.+ ..+.+||+.+.+-
T Consensus 270 G~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTEE
T ss_pred CcCCCcccceEEEEcCCCCEE
Confidence 653 3578888876543
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.80 E-value=0.15 Score=41.32 Aligned_cols=150 Identities=12% Similarity=-0.001 Sum_probs=84.1
Q ss_pred ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeee------ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEE
Q 015490 211 SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVAT------PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVT 284 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 284 (406)
.+.+++|+|+|.+.++ .+|.++-.+..+..... .+-...-....++.|.|++. ||.+ .|+.|+-
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~----LYav----~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY----LYAV----SKDKLYK 111 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC----EEEE----ETTEEEE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC----EEEe----CCCEEEE
Confidence 7889999999986665 67776666654422211 11100111136788999986 2332 3588888
Q ss_pred EeCCCceE-------EEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce------EEEEeecccccceEEEEE
Q 015490 285 WNTTTWKR-------IRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ------VRTAVKKAHLGIVTALAF 351 (406)
Q Consensus 285 ~d~~~~~~-------~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~ 351 (406)
++..+... ...-...-..+..+.+.|+|.+.++. |+.++-....+.. ....+-...-..-+.+.|
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 87643111 11111111457899999999877776 7775443333211 011111122223456779
Q ss_pred cCCCCeEEEEECCCcEEEEEecCCc
Q 015490 352 SYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 352 sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
.+++...+.. ++ ++|....++
T Consensus 190 ~~~G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 190 SSVGTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp CTTSCEEEEE--TT--EEEEESCCC
T ss_pred CCCCcEEEEe--CC--eEEecCCcc
Confidence 9998866655 66 567665553
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.74 E-value=0.68 Score=47.97 Aligned_cols=245 Identities=11% Similarity=0.037 Sum_probs=133.7
Q ss_pred CCCceEEEEccCCCeEEEEe-cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCC----CCEEEEe--
Q 015490 113 SDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSE----GTIFAAG-- 185 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~~-- 185 (406)
.....++++-.+| ++++|+ .++-.+|.++........ .-..+..+..-++|.+++.... ...++++
T Consensus 326 ~~~~ssl~~l~~g-~lFvgS~~Gds~l~~~~~~~~~~~~------~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG 398 (1158)
T 3ei3_A 326 TSIAECLTYLDNG-VVFVGSRLGDSQLVKLNVDSNEQGS------YVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSG 398 (1158)
T ss_dssp CSCCSEEEECSTT-EEEEECSSSCEEEEEECSSCCTTSC------CEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEEC
T ss_pred ccCccEEEEECCC-EEEEEEecCCcEEEEEecCCCCccc------eEEeEeeecCcCCceeEEEEccCCCCCCeEEEEEC
Confidence 3345777777666 566666 777789988764321100 1134556666788888877432 1344443
Q ss_pred -eCCCeEEEEeCCCcce-Eeeee-ccCCceeEEEEc---cCCCEEEEEeCCCCEEEEEcCCCeeeeecc--cC--CcceE
Q 015490 186 -SENGNLRVFKWPSLEI-ILNES-EAHASVKDLSFS---PDGKFLVSLGNRGPGRVWDLASSAVATPLA--KE--NDELF 255 (406)
Q Consensus 186 -~~dg~i~vwd~~~~~~-~~~~~-~~~~~i~~~~~s---~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~--~~~~~ 255 (406)
+.+|.++++.-.-+-. ..... ..-..++.+... ....+|+.+..+.+ .++.+... .+..+. +- ....+
T Consensus 399 ~g~~gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e-~veev~~~gf~~~~~TL 476 (1158)
T 3ei3_A 399 AFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGE-EVEETELMGFVDDQQTF 476 (1158)
T ss_dssp CGGGCEEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETT-EEEEECCTTCCSSSCEE
T ss_pred cCCCCeEEEEecCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCC-cccccccccccCCCCcE
Confidence 3468888876321111 11111 112245555543 23457777666655 56665322 222221 10 11112
Q ss_pred EEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceE
Q 015490 256 ASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR-EPVSSFNVSADGKLLAVGTASGDISIIDSSSLQV 334 (406)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 334 (406)
.+.. ..++. + +-++ ...|++.+......+..+.... ..|...+.+ +.+++.++ ++.+.++.+..++.
T Consensus 477 ~~~~-l~~~~----i-vQVt---~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L 544 (1158)
T 3ei3_A 477 FCGN-VAHQQ----L-IQIT---SASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQEL 544 (1158)
T ss_dssp EEEE-ETTTE----E-EEEE---SSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEE
T ss_pred EEEE-cCCCe----E-EEEe---cCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCce
Confidence 1111 12211 1 1121 4457778776655565655433 356666655 34666665 67888888776543
Q ss_pred EEEeecccccceEEEEEcCC------CCeEEEEEC-CCcEEEEEecCCcCC
Q 015490 335 RTAVKKAHLGIVTALAFSYD------SRALVSASM-DSSVRVTVIEDKKKS 378 (406)
Q Consensus 335 ~~~~~~~~~~~v~~~~~sp~------~~~l~s~s~-dg~i~iw~~~~~~~~ 378 (406)
.......-...|.|+++.|. +++++.|.. |++|+|+++.+.+.+
T Consensus 545 ~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 545 RQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp EEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred eeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 32222234567999999863 468999997 999999999865543
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.67 E-value=0.28 Score=42.52 Aligned_cols=224 Identities=13% Similarity=0.050 Sum_probs=105.7
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec-----C---C--eEEEEEecccccceeecceeccce
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ-----N---S--CRLFEWDEVENTEIRRLGVKISEK 159 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~-----~---~--~~i~~~~~~~~~~~~~~~~~~~~~ 159 (406)
.+..+|+..+.|.. ..+..............++..++.|+. + . -.+|.++..+.+-... ..
T Consensus 14 ~~~~yd~~~~~W~~---~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~----- 84 (315)
T 4asc_A 14 GAVAYDPAANECYC---ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-PP----- 84 (315)
T ss_dssp EEEEEETTTTEEEE---EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-CC-----
T ss_pred ceEEECCCCCeEec---CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-CC-----
Confidence 57788888877743 222222223333344456777777761 1 1 1267777654432111 10
Q ss_pred eeeccccc-CcEEEEEECCCCCEEEEeeCC--------CeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeC-
Q 015490 160 VLSQLENV-GQQLALTFDSEGTIFAAGSEN--------GNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGN- 229 (406)
Q Consensus 160 ~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~- 229 (406)
+... .....+.+ ++++++.|+.+ ..+.+||..+.+-...-..........+..-+++.++.|+.
T Consensus 85 ----~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 85 ----LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp ----BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred ----CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCC
Confidence 0011 11112222 66777777642 46899998876533221111111111112235666777765
Q ss_pred C-----CCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC---cEEEEEeCCCceEEEEee--ec
Q 015490 230 R-----GPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG---ASIVTWNTTTWKRIRTKQ--VV 299 (406)
Q Consensus 230 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~i~~~d~~~~~~~~~~~--~~ 299 (406)
+ ..+.+||..+.+-...-.......-.++... +++ ++++...... ..+.+||+.+.+-...-. ..
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~----iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 233 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGR----IIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE 233 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTE----EEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCE----EEEEeccCCCCccceEEEEECCCCeEEECCCCCCc
Confidence 2 4689999987654332111111111112222 332 3333322222 368889987754322211 11
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC--------------CcEEEEECCCceEE
Q 015490 300 REPVSSFNVSADGKLLAVGTAS--------------GDISIIDSSSLQVR 335 (406)
Q Consensus 300 ~~~i~~~~~sp~~~~l~~~~~d--------------g~i~i~d~~~~~~~ 335 (406)
......+.+ +++.++.|+.+ ..+.+||+.+.+-.
T Consensus 234 r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 234 RSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp CBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred ccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 112222322 56777777653 23778888765433
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.59 E-value=0.32 Score=42.22 Aligned_cols=192 Identities=10% Similarity=0.035 Sum_probs=90.4
Q ss_pred ECCCCCEEEEeeC----CC-------eEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeCC-------CCEEE
Q 015490 175 FDSEGTIFAAGSE----NG-------NLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGNR-------GPGRV 235 (406)
Q Consensus 175 ~s~~g~~l~~~~~----dg-------~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~d-------~~i~i 235 (406)
...++.+++.|+. ++ .+.+||..+.+-...-..... .-.+++.. +++.++.|+.+ ..+.+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEE
Confidence 3457778888873 11 277888877654322111111 11122222 56677777653 24788
Q ss_pred EEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCC----CcEEEEEeCCCceEEEE--eeecCCCeEEEEEc
Q 015490 236 WDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDR----GASIVTWNTTTWKRIRT--KQVVREPVSSFNVS 309 (406)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~i~~~d~~~~~~~~~--~~~~~~~i~~~~~s 309 (406)
||..+.+-...-.......-.+++. .++. +|++..... ...+.+||+.+.+-... +.........+.+
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~----iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS-HNGM----IYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE-ETTE----EEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred EeCCCCCEeECCCCCCcccccEEEE-ECCE----EEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-
Confidence 8988765433211111111111222 2332 333221111 24588999887543222 1111111122222
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEECC--------------CcEEEE
Q 015490 310 ADGKLLAVGTAS-----GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMD--------------SSVRVT 370 (406)
Q Consensus 310 p~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d--------------g~i~iw 370 (406)
+++.++.|+.+ ..+.+||+.+.+-...-.......-.++. .-+++.++.|+.+ ..+.+|
T Consensus 206 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 206 -KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp -TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred -CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 56777777653 35788998775433221101111111222 2256777777654 357788
Q ss_pred EecCC
Q 015490 371 VIEDK 375 (406)
Q Consensus 371 ~~~~~ 375 (406)
|+.+.
T Consensus 284 d~~~~ 288 (318)
T 2woz_A 284 EDDKK 288 (318)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 87664
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.59 E-value=0.34 Score=45.08 Aligned_cols=91 Identities=19% Similarity=0.069 Sum_probs=63.6
Q ss_pred EEEEEeCCC----ce-EEEEeeecCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCc------eE-------EEEeecc
Q 015490 281 SIVTWNTTT----WK-RIRTKQVVREPVSSFNVSADGKLLAVGTA-SGDISIIDSSSL------QV-------RTAVKKA 341 (406)
Q Consensus 281 ~i~~~d~~~----~~-~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-dg~i~i~d~~~~------~~-------~~~~~~~ 341 (406)
.+.+.|.+. +. .+..+... .....+..+|||+++++++. +.++.++|.+.. +. .....
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~p-ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-- 375 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVP-KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-- 375 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEES-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--
T ss_pred CeeEEccccccccCCceEEEEeCC-CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--
Confidence 477888776 32 33333333 44578999999999998876 889999998742 11 22222
Q ss_pred cccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 342 HLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 342 ~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
-.......+|.++|....|.-.|..|.-|++..
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 233467899999996556666899999999975
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.41 E-value=0.32 Score=44.78 Aligned_cols=98 Identities=15% Similarity=0.213 Sum_probs=57.0
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceE--eeeec------cCCceeEEEEccC---CCEEEEEeC-------
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEII--LNESE------AHASVKDLSFSPD---GKFLVSLGN------- 229 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~--~~~~~------~~~~i~~~~~s~~---~~~l~s~s~------- 229 (406)
.....++|.|+|+++++-...+.|++++..+++.. ..+.. .......|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999997776544457888876555432 22211 2336779999995 555554432
Q ss_pred ------CCCEEEEEcCCC-------eeee-ecccCCcceEEEEEEEcCCC
Q 015490 230 ------RGPGRVWDLASS-------AVAT-PLAKENDELFASCRFSPLNN 265 (406)
Q Consensus 230 ------d~~i~iwd~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (406)
...|.-|+...+ +.+. .+..........++|.|++.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 124555555321 1111 12222223467899999986
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.071 Score=46.76 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=59.4
Q ss_pred EEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEe-eCCCeEEEEeCCCcceEeeeeccCC-ceeE
Q 015490 137 RLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAG-SENGNLRVFKWPSLEIILNESEAHA-SVKD 214 (406)
Q Consensus 137 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~-~i~~ 214 (406)
.||-++..+++....+........+ ....... ..++..++.. ..||.|..++..+|.....+....- ...-
T Consensus 21 ~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~------~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 21 GLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSR------LETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSP 93 (339)
T ss_dssp CEEEEETTTTEEEEEECGGGSCCSE-ECCCSCT------TTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCS
T ss_pred eEEEEECCCCcEEEEecCCccCCcE-EecCCcc------ccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccc
Confidence 4566777777776665442001111 1111110 1233344343 5799999999888755443322111 1111
Q ss_pred EEEc-----------cCCCEEEEEeCCCCEEEEEcCCCeeeeecccC
Q 015490 215 LSFS-----------PDGKFLVSLGNRGPGRVWDLASSAVATPLAKE 250 (406)
Q Consensus 215 ~~~s-----------~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 250 (406)
+... ..+..+++++.++.+...|+++|+.+..+...
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp EEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 2211 13457889999999999999999998877643
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.28 E-value=0.054 Score=43.95 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=78.0
Q ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceE-----eeeeccCC--ceeEEEEccCCCEEEEEeCCCCEEEEEcCC
Q 015490 168 GQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEII-----LNESEAHA--SVKDLSFSPDGKFLVSLGNRGPGRVWDLAS 240 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~-----~~~~~~~~--~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~ 240 (406)
..+..++|+|+|.+.++ .+|.++-.+..+.... .+..+..+ ...++.|.|+|.+.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46679999999987777 6787776665442211 11111111 2478999999987776 568888777543
Q ss_pred Ceeeee------cccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce------EEEEee-ecCCCeEEEE
Q 015490 241 SAVATP------LAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK------RIRTKQ-VVREPVSSFN 307 (406)
Q Consensus 241 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~------~~~~~~-~~~~~i~~~~ 307 (406)
.....- +....-..+..+.+.|++. |+ +.. ++.++-....+.. ....+- ..-....-+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~----Ly--av~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~ 188 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGY----LY--AVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF 188 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSC----EE--EEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCce----EE--EEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEE
Confidence 221111 1111113468899999997 23 332 5555433322111 001111 1112334566
Q ss_pred EcCCCCEEEEEeCCCcE
Q 015490 308 VSADGKLLAVGTASGDI 324 (406)
Q Consensus 308 ~sp~~~~l~~~~~dg~i 324 (406)
|++++.+.++. ++.+
T Consensus 189 f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 189 FSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp ECTTSCEEEEE--TTEE
T ss_pred ECCCCcEEEEe--CCeE
Confidence 88888777665 6643
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.27 E-value=0.5 Score=40.97 Aligned_cols=223 Identities=11% Similarity=0.045 Sum_probs=103.4
Q ss_pred EEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEec---CC-------eEEEEEecccccceeecceecccee
Q 015490 91 LSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQ---NS-------CRLFEWDEVENTEIRRLGVKISEKV 160 (406)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~---~~-------~~i~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
+..+|+..+.|.. ..+..............++..++.|+. .. ..+|.++..+.+-...-.
T Consensus 26 ~~~yd~~~~~W~~---~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~------- 95 (318)
T 2woz_A 26 AVAYDPMENECYL---TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP------- 95 (318)
T ss_dssp EEEEETTTTEEEE---EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC-------
T ss_pred eEEECCCCCceec---ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC-------
Confidence 5778888877744 122221222233344556777777661 11 126777765433221100
Q ss_pred eeccccc-CcEEEEEECCCCCEEEEeeCC-------CeEEEEeCCCcceEeeeeccCCce-eEEEEccCCCEEEEEeC--
Q 015490 161 LSQLENV-GQQLALTFDSEGTIFAAGSEN-------GNLRVFKWPSLEIILNESEAHASV-KDLSFSPDGKFLVSLGN-- 229 (406)
Q Consensus 161 ~~~~~~~-~~v~~~~~s~~g~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~s~s~-- 229 (406)
+... .....+.+ ++++++.|+.+ ..+.+||..+.+-...-....... .+++. .+++.++.|+.
T Consensus 96 ---~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 169 (318)
T 2woz_A 96 ---LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTD 169 (318)
T ss_dssp ---BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEES
T ss_pred ---CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCC
Confidence 1111 11112222 56777777754 358889987765432211111111 12222 35666666653
Q ss_pred ----CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCC---cEEEEEeCCCceEEEE--eeecC
Q 015490 230 ----RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRG---ASIVTWNTTTWKRIRT--KQVVR 300 (406)
Q Consensus 230 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~i~~~d~~~~~~~~~--~~~~~ 300 (406)
-..+.+||+.+.+-...-.........+++.. ++. ++++.....+ ..+.+||+.+.+-... +....
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~----iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGK----IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE----EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCE----EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 23589999987754332111111111122222 222 3333322222 4577899876543221 11111
Q ss_pred CCeEEEEEcCCCCEEEEEeCC--------------CcEEEEECCCceEEE
Q 015490 301 EPVSSFNVSADGKLLAVGTAS--------------GDISIIDSSSLQVRT 336 (406)
Q Consensus 301 ~~i~~~~~sp~~~~l~~~~~d--------------g~i~i~d~~~~~~~~ 336 (406)
.....+. -+++.++.|+.+ ..+.+||+.+.+-..
T Consensus 245 ~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 245 SSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp BSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred cceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 1112222 246677776643 357888887765433
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.23 E-value=0.5 Score=41.69 Aligned_cols=56 Identities=16% Similarity=0.044 Sum_probs=30.0
Q ss_pred EEEEEeCCCc--eEEEEeeecCCCeEEEEEcCCCCEEEEEeCCC------cEEEEECCCceEEEEe
Q 015490 281 SIVTWNTTTW--KRIRTKQVVREPVSSFNVSADGKLLAVGTASG------DISIIDSSSLQVRTAV 338 (406)
Q Consensus 281 ~i~~~d~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg------~i~i~d~~~~~~~~~~ 338 (406)
.+.+||+.+. +.+..+......-.++ .-+++.++.|+.++ .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5778888754 3443333222222222 23677888887643 3666788877665544
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.19 E-value=0.22 Score=44.13 Aligned_cols=145 Identities=12% Similarity=0.117 Sum_probs=78.9
Q ss_pred ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc------cCCcceEEEEEEEcC---CCCceEEEEEEEcCC---
Q 015490 211 SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA------KENDELFASCRFSPL---NNEDYVLYIAAITDR--- 278 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~--- 278 (406)
....|+|.|+|+.|+++...|.|++++.. +.....+. .........++++|+ +.. +|+..+...
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~---lYv~~~~~~~~g 94 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR---IWLSYSEVGDDG 94 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE---EEEEEEEECSSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCE---EEEEEeCCCCCC
Confidence 56899999999834455667899999853 33221111 112234578999996 442 444433211
Q ss_pred --CcEEEEEeCCCc--e--EEEEe-ee------cCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCc
Q 015490 279 --GASIVTWNTTTW--K--RIRTK-QV------VREPVSSFNVSADGKLLAVGTA-------------SGDISIIDSSSL 332 (406)
Q Consensus 279 --~~~i~~~d~~~~--~--~~~~~-~~------~~~~i~~~~~sp~~~~l~~~~~-------------dg~i~i~d~~~~ 332 (406)
...|..++.... + ....+ .. .......+.|.|||.+.++.+. .|.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 345666665432 1 11111 11 1122467999999965554332 246777776532
Q ss_pred e------------EEEEeecccccceEEEEEcC-CCCeEEE
Q 015490 333 Q------------VRTAVKKAHLGIVTALAFSY-DSRALVS 360 (406)
Q Consensus 333 ~------------~~~~~~~~~~~~v~~~~~sp-~~~~l~s 360 (406)
- ....+..+|. ....++|+| +|+++++
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 0 1112222343 367899999 5665554
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.021 Score=50.15 Aligned_cols=188 Identities=11% Similarity=0.030 Sum_probs=100.5
Q ss_pred CEEEEeeCCCeEEEEeCCCcceEeeeeccC-CceeEEEE--ccCCCEEEEE--eCCCCEEEEEcCCCeeeeecccCC---
Q 015490 180 TIFAAGSENGNLRVFKWPSLEIILNESEAH-ASVKDLSF--SPDGKFLVSL--GNRGPGRVWDLASSAVATPLAKEN--- 251 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~--s~~~~~l~s~--s~d~~i~iwd~~~~~~~~~~~~~~--- 251 (406)
..+++++.||.|.-+|..+|+....+.... .++....- .+.+..++.+ +.||.+..++..+|.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 467888999999999999999887776541 12211110 0112234433 589999999988875543332110
Q ss_pred cceEEE---EEE------EcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecC--CC-----eEEEEEc-----C
Q 015490 252 DELFAS---CRF------SPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVR--EP-----VSSFNVS-----A 310 (406)
Q Consensus 252 ~~~~~~---~~~------~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~-----i~~~~~s-----p 310 (406)
..++.. ... +.++ .+..++.++.+...|+++|+.+..+.... .. ..|.... .
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g-------~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~ 163 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDE-------KVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQE 163 (339)
T ss_dssp TCSEEEECC----------CCE-------EEEECEEEEEEEEEETTTCCEEEEESTTCBCC-------------------
T ss_pred ccccccCCCceeecccccccCC-------EEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccccccccccc
Confidence 111110 000 0111 34566789999999999999998886432 10 0111111 1
Q ss_pred CCCEEEEEeCCCcEEEEECCCceEEEEee----cccc--cceE-EEEEcCCCCeEEEEECCCcEEEEEecCCcC
Q 015490 311 DGKLLAVGTASGDISIIDSSSLQVRTAVK----KAHL--GIVT-ALAFSYDSRALVSASMDSSVRVTVIEDKKK 377 (406)
Q Consensus 311 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~--~~v~-~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~ 377 (406)
.+..|+.+..+..+.+.+ ++++ +-.+. ..+. ..+. +-..+.|+.+ +.++.||.|.-.|..+++.
T Consensus 164 ~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 164 CENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp -CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCE
T ss_pred CCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcE
Confidence 245677777777777766 4443 21111 0000 0000 0001234665 4467888888888777765
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.17 E-value=1.1 Score=44.14 Aligned_cols=232 Identities=12% Similarity=0.053 Sum_probs=129.3
Q ss_pred CCCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEE
Q 015490 113 SDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLR 192 (406)
Q Consensus 113 ~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 192 (406)
...|.+|.-..+|..- .|....+ ..+|.... ..+.. . .......|.++.-..+|. |..|+.+| +.
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~GL--~ryDG~~~---~~~~~--~-----~~~~~~~i~~i~~d~~g~-lWigT~~G-l~ 85 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKGL--FSYDGYST---QQHFT--Y-----GENNNTRIYCGVIIDNTY-LYMGTDNG-IL 85 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSCE--EEECSSCE---EECSC--T-----TSTTSSCEEEEEEETTTE-EEEEETTE-EE
T ss_pred cceEEEEEECCCCCEE-EEECCCc--cccCCCce---EEEEc--c-----CCCCCceEEEEEEcCCCc-EEEEeCCC-eE
Confidence 4568888887777544 4444443 33443211 11100 0 001235688887777764 55566655 78
Q ss_pred EEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeec---ccCCcceEEEEEEEcCCCCceE
Q 015490 193 VFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPL---AKENDELFASCRFSPLNNEDYV 269 (406)
Q Consensus 193 vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 269 (406)
.||..+.+...........|.++.. .++ .|..++.+ .+..+|..+++..... .......+.++....++.
T Consensus 86 ~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~---- 158 (758)
T 3ott_A 86 VYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ---- 158 (758)
T ss_dssp EEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC----
T ss_pred EEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC----
Confidence 8998776433211111225676654 345 46666665 6888998765543220 111223466666666665
Q ss_pred EEEEEEcCCCcEEEEEeCCCceEEEEeeec------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeecccc
Q 015490 270 LYIAAITDRGASIVTWNTTTWKRIRTKQVV------REPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKKAHL 343 (406)
Q Consensus 270 l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 343 (406)
+ ++++ . +.|..+|..+.+... +... ...|.++...+++..|.+|+. +-+..+|..+++...... ...
T Consensus 159 l-Wigt--~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~-l~~ 231 (758)
T 3ott_A 159 I-YVGT--Y-NGLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEA-FHN 231 (758)
T ss_dssp E-EEEE--T-TEEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEE-EEE
T ss_pred E-EEEe--C-CCHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccC-CCC
Confidence 2 3333 2 357788887765322 2111 124888888887776666664 458889987765432211 233
Q ss_pred cceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 344 GIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 344 ~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
..|.++....+|.+.+ |+.+ -+.+++..++
T Consensus 232 ~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 232 NSIKSLALDGNGDLLA-GTDN-GLYVYHNDTT 261 (758)
T ss_dssp EEEEEEEECTTCCEEE-EETT-EEEEECCTTS
T ss_pred CeEEEEEEcCCCCEEE-EeCC-ceeEEecCCC
Confidence 4588888888887665 4444 5777776553
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.44 E-value=1.1 Score=38.53 Aligned_cols=246 Identities=11% Similarity=0.058 Sum_probs=134.8
Q ss_pred CCcEEEEEcCCCCCCCCcCccEEEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecC-------------
Q 015490 68 RNYYVVLAGGGGAGNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQN------------- 134 (406)
Q Consensus 68 ~~~~~~~~~ggg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~------------- 134 (406)
.++.++++...+ .-.++.++.+... ...+... .+--+++++.+|+.+...
T Consensus 24 ~g~~iy~~n~~d--------~~~ly~~~~dg~~-----~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n 86 (302)
T 3s25_A 24 SDGEVFFSNTND--------NGRLYAMNIDGSN-----IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYD 86 (302)
T ss_dssp ETTEEEEEEGGG--------TTEEEEEETTSCS-----CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCC
T ss_pred eCCEEEEEeCCC--------CceEEEEcCCCCC-----CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccC
Confidence 556666653321 1267777776533 2222221 245678999999988632
Q ss_pred CeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEee----CCCeEEEEeCCCcceEeeeeccCC
Q 015490 135 SCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGS----ENGNLRVFKWPSLEIILNESEAHA 210 (406)
Q Consensus 135 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~ 210 (406)
.-.|+.++....+.... ... .+..|+++++.|+... .+..|...+++... ...+..+..
T Consensus 87 ~~~Iy~i~~dg~~~~~l--------------~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~ 149 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVL--------------DPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL 149 (302)
T ss_dssp SEEEEEEETTSCCCEEE--------------ECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC
T ss_pred CCeEEEEeCCCCcceEe--------------ecC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc
Confidence 45777777664431111 011 1236778888888765 23456666665333 333433322
Q ss_pred ceeEEEEccCCCEEEEEeC-CCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC
Q 015490 211 SVKDLSFSPDGKFLVSLGN-RGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT 289 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~ 289 (406)
..++++++.|+..+. ...|.+.++..+.....+.. . . ...+.|++.. ++.+.. .....|..-++..
T Consensus 150 ----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~--~-~~~~~P~g~~---iy~t~~-~~~~~I~~~~ldG 216 (302)
T 3s25_A 150 ----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--N--C-YKPVVLDDTN---VYYMDV-NRDNAIVHVNINN 216 (302)
T ss_dssp ----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--C--E-EEEEEEETTE---EEEEEG-GGTTEEEEECSSS
T ss_pred ----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--C--c-cceeeecCCE---EEEEEc-CCCcEEEEEECCC
Confidence 456778888887775 56888888876654443321 1 1 1235688885 333322 2235788888876
Q ss_pred ceEEEEeeecCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEE-CCCc
Q 015490 290 WKRIRTKQVVREPVSSFNVSADGKLLAVGTA--SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS-MDSS 366 (406)
Q Consensus 290 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s-~dg~ 366 (406)
... ..+. ...+ ..|+|++++|+.+.. .+.|...++..... ..+..+ .+.. +++.+.+|+-.. ..+.
T Consensus 217 ~~~-~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r-~~l~~~---~~~~--i~i~~d~Iy~td~~~~~ 285 (302)
T 3s25_A 217 PNP-VVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGF-KELAKG---EFCN--INVTSQYVYFTDFVSNK 285 (302)
T ss_dssp CCC-EECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCC-EEEEES---CEEE--EEECSSEEEEEETTTCC
T ss_pred CCe-EEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCcc-EEeeCC---ccce--EEEeCCEEEEEECCCCe
Confidence 542 3332 2233 447888999887643 45677778764433 333212 2333 344556665444 3345
Q ss_pred EEEEE
Q 015490 367 VRVTV 371 (406)
Q Consensus 367 i~iw~ 371 (406)
|..-+
T Consensus 286 i~~~~ 290 (302)
T 3s25_A 286 EYCTS 290 (302)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.28 E-value=1 Score=43.90 Aligned_cols=196 Identities=10% Similarity=0.080 Sum_probs=98.9
Q ss_pred CCCCEEEEeeCC----CeEEEEeCCCcceEeee-e-----ccCC-ceeEEEEcc-CCCEEEEEeCC------CCEEEEEc
Q 015490 177 SEGTIFAAGSEN----GNLRVFKWPSLEIILNE-S-----EAHA-SVKDLSFSP-DGKFLVSLGNR------GPGRVWDL 238 (406)
Q Consensus 177 ~~g~~l~~~~~d----g~i~vwd~~~~~~~~~~-~-----~~~~-~i~~~~~s~-~~~~l~s~s~d------~~i~iwd~ 238 (406)
.++.+++.|+.+ ..+.+||..+++....- . .... .-.+++..+ +++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 466777788753 46889998776543322 1 0111 122333333 67777777643 35788998
Q ss_pred CCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEee-----ecCCCeEEEEEcCC-C
Q 015490 239 ASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQ-----VVREPVSSFNVSAD-G 312 (406)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~i~~~~~sp~-~ 312 (406)
.+.+-...-.......-.+++...++. +|++......+.+.+||..+.+-...-. .......++.+..+ +
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~----iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGN----VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSC----EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCE----EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 876543321111111111222222443 3333222222278999998755322211 11122233555555 6
Q ss_pred CEEEEEeC--C-----CcEEEEECCCceE-----EEEeec--ccccceEEEEEcCCCCeEEEEECC--------CcEEEE
Q 015490 313 KLLAVGTA--S-----GDISIIDSSSLQV-----RTAVKK--AHLGIVTALAFSYDSRALVSASMD--------SSVRVT 370 (406)
Q Consensus 313 ~~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~--~~~~~v~~~~~sp~~~~l~s~s~d--------g~i~iw 370 (406)
+.++.|+. + ..+.+||+.+..- -..+.. .....-.++....+++.++.|+.+ ..|.+|
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 67777765 2 3588999887661 111111 011111133333346777777743 458899
Q ss_pred EecCCc
Q 015490 371 VIEDKK 376 (406)
Q Consensus 371 ~~~~~~ 376 (406)
|+.+.+
T Consensus 632 d~~t~~ 637 (695)
T 2zwa_A 632 DPLSET 637 (695)
T ss_dssp ETTTTE
T ss_pred ECCCCe
Confidence 987653
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.10 E-value=2.7 Score=40.97 Aligned_cols=160 Identities=16% Similarity=0.156 Sum_probs=82.6
Q ss_pred EEECCCCCEEEEeeCC------CeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEEeCCC--CEEEEEcCCCee
Q 015490 173 LTFDSEGTIFAAGSEN------GNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSLGNRG--PGRVWDLASSAV 243 (406)
Q Consensus 173 ~~~s~~g~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~s~d~--~i~iwd~~~~~~ 243 (406)
+.+..++++++.|+.+ ..+.+||..+.+-...-..... .-.+.+...+++.++.|+.++ .+.+||..+.+-
T Consensus 446 ~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 446 TTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp EEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred EEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 3343377788888653 3588999887543322111111 112233324788888887654 699999988764
Q ss_pred eeecc---cC-CcceEEEEEEEcCCCCceEEEEEEEcCC-----CcEEEEEeCCCceE-----EEEeee---cCCCeEEE
Q 015490 244 ATPLA---KE-NDELFASCRFSPLNNEDYVLYIAAITDR-----GASIVTWNTTTWKR-----IRTKQV---VREPVSSF 306 (406)
Q Consensus 244 ~~~~~---~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~i~~~d~~~~~~-----~~~~~~---~~~~i~~~ 306 (406)
...-. .. .......+.+...... +|++..... ...+..||+.+.+- ...+.. ....-.++
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~~~---iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVSKQ---GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTTTE---EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred EEccCCCCCCCcccceeEEEEeCCCCE---EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 33221 00 1111123445544332 333322211 25688999877651 111211 11111223
Q ss_pred EEcCCCCEEEEEeC--------CCcEEEEECCCceEE
Q 015490 307 NVSADGKLLAVGTA--------SGDISIIDSSSLQVR 335 (406)
Q Consensus 307 ~~sp~~~~l~~~~~--------dg~i~i~d~~~~~~~ 335 (406)
+...+++.++.|+. ...+.+||+.+.+-.
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 33334677777774 345999999877654
No 344
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.82 E-value=1.8 Score=37.51 Aligned_cols=198 Identities=8% Similarity=0.090 Sum_probs=117.9
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC-eeeeecccC
Q 015490 172 ALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS-AVATPLAKE 250 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~ 250 (406)
+.-.+|..+.+|.-. ..++.++|+++.+.+....-. ..|.--.|-.+. .|+-.+ +..|+-|++... .+.+.+..+
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 345688888887765 679999999998887766543 456667776543 455555 448999999753 344433322
Q ss_pred ---CcceEEEEEEEcCCCCceEEEEEEEcCC---CcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCC-----CEEEEEe
Q 015490 251 ---NDELFASCRFSPLNNEDYVLYIAAITDR---GASIVTWNTTTWKRIRTKQVVREPVSSFNVSADG-----KLLAVGT 319 (406)
Q Consensus 251 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~-----~~l~~~~ 319 (406)
....+..-..+++.+. .+++..+... .|.+.+|..+.. ....+.+|...... +-.+| +.++.+.
T Consensus 147 ~~L~~~QIInY~~d~~~kW--~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~--~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKW--LLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQ--FKMEGNAEESTLFCFAV 221 (365)
T ss_dssp GGGTTCEEEEEEECTTSCE--EEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEE--ECCTTCSSCEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCE--EEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEE--EecCCCCCCceEEEEEE
Confidence 1233444455555553 3333332222 367888888763 34556666432222 22222 2344443
Q ss_pred C---CCcEEEEECCCc---e------EEEEee--cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 320 A---SGDISIIDSSSL---Q------VRTAVK--KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 320 ~---dg~i~i~d~~~~---~------~~~~~~--~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
. .+.++|.++... . ....+. ....+-..++..|+.-..+...+.-|.|++||++++..+
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 3 258999998432 1 111111 112344567888887778888899999999999998754
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.83 E-value=4.4 Score=42.52 Aligned_cols=200 Identities=9% Similarity=0.091 Sum_probs=112.0
Q ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCC-eeeeecccC
Q 015490 172 ALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS-AVATPLAKE 250 (406)
Q Consensus 172 ~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~ 250 (406)
+.-.+|..+.+|.-. ..++.|||+++...+....-. ..|.--.|-.+. .|+-.+ +..|+-|++... .+.+.+..+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 345677777777654 679999999887766555433 346666675443 344444 448999999642 333333322
Q ss_pred ---CcceEEEEEEEcCCCCceEEEEEEE---cCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEc--C-CCCEEEEEeC-
Q 015490 251 ---NDELFASCRFSPLNNEDYVLYIAAI---TDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVS--A-DGKLLAVGTA- 320 (406)
Q Consensus 251 ---~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~s--p-~~~~l~~~~~- 320 (406)
.+..|..-..+++.+. .+++..+ +.-.|.+.+|....+ ....+.+|.+....+... + ....++.+..
T Consensus 146 ~~L~~~QIinY~~d~~~kW--~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKW--LLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred hhcccCeeEEeeeCCCCCe--EEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence 1233444455555553 3322222 123477888887653 233445554333333322 1 1223333322
Q ss_pred --CCcEEEEECCCc---eEE------EEee--cccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 321 --SGDISIIDSSSL---QVR------TAVK--KAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 321 --dg~i~i~d~~~~---~~~------~~~~--~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
.+.++|.++... ... ..+. ....+-..++..++.-..+...+.-|.|+++|+.++..+
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 368899888542 111 0111 011233457777877677888889999999999998763
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.34 E-value=1.6 Score=40.70 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=77.9
Q ss_pred cCCCCceEEEEccCCCeEEEEe--cCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCC
Q 015490 111 TDSDLPYRMAIHPHGDGIICAL--QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSEN 188 (406)
Q Consensus 111 ~h~~~v~~~~~sp~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 188 (406)
.-...+..+.++|||+++++++ +.++.+++++.........+ ..+........+-.-.....+|.++|....+---|
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~-~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL-ADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC-SCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTT
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc-cCcccceEeeccCCCcccEEEECCCCceEeeeeec
Confidence 3456778999999999999988 77778877663211000000 01122223333334556788999999655566679
Q ss_pred CeEEEEeCCCc----------ceEeeeeccCCceeEEEE------ccCCCEEEEEe---CCCCE----------EEEEcC
Q 015490 189 GNLRVFKWPSL----------EIILNESEAHASVKDLSF------SPDGKFLVSLG---NRGPG----------RVWDLA 239 (406)
Q Consensus 189 g~i~vwd~~~~----------~~~~~~~~~~~~i~~~~~------s~~~~~l~s~s---~d~~i----------~iwd~~ 239 (406)
..|.-|++... ..+.++.-|. .+-.+.- .+||++|++.. .|+.+ .+.|+.
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y-qpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs 477 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY-QPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS 477 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECSS-CEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS
T ss_pred ceEEEEeccHHHHHhcCccCCeeeecccccc-CCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecC
Confidence 99999998543 2333333333 2333333 57899999985 35433 677774
Q ss_pred C
Q 015490 240 S 240 (406)
Q Consensus 240 ~ 240 (406)
.
T Consensus 478 G 478 (638)
T 3sbq_A 478 G 478 (638)
T ss_dssp S
T ss_pred C
Confidence 4
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.72 E-value=2.2 Score=39.27 Aligned_cols=111 Identities=15% Similarity=0.138 Sum_probs=63.2
Q ss_pred CceeEEEEccCCC-EEEEEeCCCCEEEEEcCCCe---eeeecc----c----CCcceEEEEEEEcCCCCceEEEEEEEcC
Q 015490 210 ASVKDLSFSPDGK-FLVSLGNRGPGRVWDLASSA---VATPLA----K----ENDELFASCRFSPLNNEDYVLYIAAITD 277 (406)
Q Consensus 210 ~~i~~~~~s~~~~-~l~s~s~d~~i~iwd~~~~~---~~~~~~----~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (406)
...+.|+|.|||. .|+++...|.|++++..... .+..+. . ........++|+|+-..+..+|+..+..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3568899999996 56667788999999753221 111111 0 0123466899999732222455555433
Q ss_pred CC----------cEEEEEeCC----------CceEEEEeee--cCCCeEEEEEcCCCCEEEEEeC
Q 015490 278 RG----------ASIVTWNTT----------TWKRIRTKQV--VREPVSSFNVSADGKLLAVGTA 320 (406)
Q Consensus 278 ~~----------~~i~~~d~~----------~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~ 320 (406)
.+ ..|.-|.+. +.+.+..+.. .......|.|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 22 244445442 1233333321 2345789999999987666544
No 348
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.06 E-value=9.5 Score=37.19 Aligned_cols=200 Identities=9% Similarity=0.077 Sum_probs=105.8
Q ss_pred EEE-ECCCCCEEEEe-e----CCCeEEEEeCCCcceEeeeeccCC--------ceeEEEEccCCCEEEEEe---------
Q 015490 172 ALT-FDSEGTIFAAG-S----ENGNLRVFKWPSLEIILNESEAHA--------SVKDLSFSPDGKFLVSLG--------- 228 (406)
Q Consensus 172 ~~~-~s~~g~~l~~~-~----~dg~i~vwd~~~~~~~~~~~~~~~--------~i~~~~~s~~~~~l~s~s--------- 228 (406)
.+. ++|++++++.+ + .-..++++|+.+++.+..-..... ....++|..+ ..++.+.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCBCT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCcCc
Confidence 344 88999877765 2 223799999999887642211111 1134588744 4444432
Q ss_pred --CCCCEEEEEcCCCee--eeecccCCcceEEEEEEEcCCCCce-EEEEEEE-cCCCcEEEEEeCCC--ceEEEEeeecC
Q 015490 229 --NRGPGRVWDLASSAV--ATPLAKENDELFASCRFSPLNNEDY-VLYIAAI-TDRGASIVTWNTTT--WKRIRTKQVVR 300 (406)
Q Consensus 229 --~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~i~~~d~~~--~~~~~~~~~~~ 300 (406)
....++.|.+.+... ...+.............+++++... .+++... ......+++.|... ++ ...+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 124578887765421 2223222223233455566665421 1233333 33446777777653 33 23333222
Q ss_pred CCeEEEEEcCCCCEEEEE----------eCCCcEEEEECCCce-------EEEE-eecccccceEEEEEcCCCCeEEEEE
Q 015490 301 EPVSSFNVSADGKLLAVG----------TASGDISIIDSSSLQ-------VRTA-VKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 301 ~~i~~~~~sp~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~-~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
.. .+..+.++.+++.. ...+.|...|+.++. .... +.......+..+.|..+ .++++..
T Consensus 291 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 291 DA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp TC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred cc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 21 23334455555532 136778999987642 1122 32233456778999876 5667777
Q ss_pred CCCc--EEEEEecCCc
Q 015490 363 MDSS--VRVTVIEDKK 376 (406)
Q Consensus 363 ~dg~--i~iw~~~~~~ 376 (406)
.++. |.++++.+++
T Consensus 368 ~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQ 383 (711)
T ss_dssp ETTEEEEEEECEETTE
T ss_pred ECCEEEEEEEECCCCc
Confidence 7764 6677776653
No 349
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.33 E-value=8.2 Score=34.97 Aligned_cols=223 Identities=9% Similarity=0.081 Sum_probs=123.2
Q ss_pred EEEEEecCCCCccccceeEEecCCCCceEEEEccCCCeEEEEecCCeEEEEEeccccc-ceeecceeccceeeecccccC
Q 015490 90 LLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENT-EIRRLGVKISEKVLSQLENVG 168 (406)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 168 (406)
.+..++.+. .+.+..+.-.+ .|.-=.|-.+ +.|+..++..+ |.|+..... ..+.++. ...+. ..
T Consensus 87 ~lQiFnle~----K~klks~~~~e-~VvfWkWis~-~~l~lVT~taV--yHWsi~~~s~P~kvFdR------~~~L~-~~ 151 (494)
T 1bpo_A 87 TLQIFNIEM----KSKMKAHTMTD-DVTFWKWISL-NTVALVTDNAV--YHWSMEGESQPVKMFDR------HSSLA-GC 151 (494)
T ss_dssp EEEEEETTT----TEEEEEEECSS-CCCEEEEEET-TEEEEECSSEE--EEEESSSSCCCEEEEEC------CGGGT-TC
T ss_pred eEEEEchHH----hhhhcceecCC-CceEEEecCC-CeEEEEcCCee--EEecccCCCCchhheec------chhcc-cc
Confidence 444445444 22444444434 4555566544 34555556654 445543221 1111111 00111 24
Q ss_pred cEEEEEECCCCCEEEEee-------CCCeEEEEeCCCcceEeeeeccCCceeEEEEccC---CCEEEEEeC---CCCEEE
Q 015490 169 QQLALTFDSEGTIFAAGS-------ENGNLRVFKWPSLEIILNESEAHASVKDLSFSPD---GKFLVSLGN---RGPGRV 235 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~s~s~---d~~i~i 235 (406)
.|..-..+++.++++..+ -.|.+.+|..+.+.. +.+.+|-.....+....+ .+.++.+.. .+.++|
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi 230 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 577778888888877543 247889999876543 344454433333332211 123444443 268888
Q ss_pred EEcCCC---e-----eeeeccc---CCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeE
Q 015490 236 WDLASS---A-----VATPLAK---ENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVS 304 (406)
Q Consensus 236 wd~~~~---~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~ 304 (406)
-++... . ....+.. ...+...++..++... ++|++ ..-|.|++||+.++.++..-+.....|.
T Consensus 231 ~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg---viyvi---TK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLI---TKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp EECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT---EEEEE---ETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC---EEEEE---ecCceEEEEecccceeeeeecccCCceE
Confidence 888543 1 1111111 1123344677777665 34443 4689999999999999988887777887
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCceE
Q 015490 305 SFNVSADGKLLAVGTASGDISIIDSSSLQV 334 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~ 334 (406)
..+.+....-++.....|.|.-..++....
T Consensus 305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 305 VTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EecccCCCCcEEEEccCceEEEEEEccccc
Confidence 777666655666667888887777665443
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.32 E-value=7.6 Score=32.86 Aligned_cols=185 Identities=13% Similarity=0.071 Sum_probs=92.2
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
.|..++...+. .++. . ||.|+.|-......+..-......|..++...+ +.+... +|.++.|-......+. +.
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg-~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT-VP 136 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS-CC
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC-CC
Confidence 55666655432 3333 4 899999976432221111111235777766543 344445 8999999765422111 11
Q ss_pred cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 015490 249 KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIID 328 (406)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d 328 (406)
......+..++..... .++. . ++.|+.|-......+.........|..++...+. .++. .||.|+.|-
T Consensus 137 ~~~~~~i~~i~~G~~~-------~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG 204 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYT-------ALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWG 204 (282)
T ss_dssp GGGGSSEEEEEECSSE-------EEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEE
T ss_pred ccCCCCeEEEEcccCE-------EEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEE
Confidence 1112235444443322 1222 2 6889999765422211111112457777765443 3333 589999997
Q ss_pred CCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCc
Q 015490 329 SSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKK 376 (406)
Q Consensus 329 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~ 376 (406)
......+.... .....|..++...+ +.+.-. ||.|+.|--....
T Consensus 205 ~n~~gqlg~p~-~~~~~v~~i~~G~~--h~~al~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 205 DNRYKQTTVPT-EALSGVSAIASGEW--YSLALK-NGKVIAWGSSRTA 248 (282)
T ss_dssp CCTTSTTCCCG-GGGSSCCEEEECSS--CEEEEE-TTEEEEESTTCCC
T ss_pred CCCCCCCCCCc-ccCCCceEEEcCCC--EEEEEE-CCEEEEecCCCCc
Confidence 65432221111 12234667765543 333334 9999999765543
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.98 E-value=15 Score=35.94 Aligned_cols=238 Identities=11% Similarity=0.036 Sum_probs=124.0
Q ss_pred CCceEEEEccCCCeEEEEecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCCEEEEeeCCCeEEE
Q 015490 114 DLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRV 193 (406)
Q Consensus 114 ~~v~~~~~sp~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~v 193 (406)
..|.++...++|...+ +..+. |+.++..+... ..+..+ . ........|.++....++..|..|+. +-+..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G--l~~~~~~~~~~-~~~~~~-~----~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~ 215 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG--LCRYIPSNGKF-EGIPLP-V----HSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQ 215 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE--EEEEETTTTEE-EEECCC-C----CTTCSSCCEEEEEEETTTTEEEEEEE-EEEEE
T ss_pred CeEEEEEEcCCCCEEE-EeCCC--HhhCccCCCce-EEecCC-C----ccccccceeEEEEEECCCCEEEEEEC-CCCeE
Confidence 4577777777776555 33433 44455433221 111100 0 00001234788888777765555654 45888
Q ss_pred EeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc------cCCcceEEEEEEEcCCCCc
Q 015490 194 FKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA------KENDELFASCRFSPLNNED 267 (406)
Q Consensus 194 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 267 (406)
+|..+++...........|.++....+|.+.+ |+. +-+.+++..+++...... .-....|.++....++.
T Consensus 216 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-- 291 (758)
T 3ott_A 216 YFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-- 291 (758)
T ss_dssp EETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC--
T ss_pred EcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC--
Confidence 88776654322111223688888887777544 554 458888887654322111 01223477777666665
Q ss_pred eEEEEEEEcCCCcEEEEEeCCCceEEEEee-----ecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce--EEEEeec
Q 015490 268 YVLYIAAITDRGASIVTWNTTTWKRIRTKQ-----VVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ--VRTAVKK 340 (406)
Q Consensus 268 ~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~ 340 (406)
+++++. .| +.++.....-...... .....|.++.-..+|++.+ |+.+| +..++..+++ ....+..
T Consensus 292 ---lWiGT~--~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~ 363 (758)
T 3ott_A 292 ---IWLGTD--YG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRM 363 (758)
T ss_dssp ---EEEEES--SS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECT
T ss_pred ---EEEEeC--Cc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEecc
Confidence 244442 34 4444332111111110 1124588888888887554 45555 6667655432 1111110
Q ss_pred ------ccccceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 341 ------AHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 341 ------~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
.....|.++.-..+|++.+ |+ ++-+..++..++
T Consensus 364 ~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~ 402 (758)
T 3ott_A 364 GDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATR 402 (758)
T ss_dssp TCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTT
T ss_pred CCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCC
Confidence 1123588888888887655 44 456888887654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.74 E-value=12 Score=34.31 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=39.8
Q ss_pred CCeEEEEEcC-------CCCEEEEEeCCCcEEEEECCCceE---EEEe-e-------cccccceEEEEEcCCCCeEEEEE
Q 015490 301 EPVSSFNVSA-------DGKLLAVGTASGDISIIDSSSLQV---RTAV-K-------KAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 301 ~~i~~~~~sp-------~~~~l~~~~~dg~i~i~d~~~~~~---~~~~-~-------~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
..+..+.|-. .|.+|+ +...+.|....++.... ...+ . ......+..+...|||.++++..
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g~~f~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYGSYVF-GDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp -CEEEEEECCCSSCTTTTTCEEE-EETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccceEEEeCCCChhhcceEEE-ecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 3567777743 234444 44457776666643321 1111 0 01235689999999999877765
Q ss_pred CC-----CcEEEEEecCC
Q 015490 363 MD-----SSVRVTVIEDK 375 (406)
Q Consensus 363 ~d-----g~i~iw~~~~~ 375 (406)
.. ..=+||.+..+
T Consensus 355 ~~~~~~~~~G~I~Ri~~p 372 (463)
T 2wg3_C 355 SKSMTQTHNGKLYKIVDP 372 (463)
T ss_dssp SSCGGGCSSEEEEEEECT
T ss_pred cCCcccCCCCcEEEecCc
Confidence 21 23467888643
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.66 E-value=19 Score=31.96 Aligned_cols=171 Identities=8% Similarity=0.015 Sum_probs=87.9
Q ss_pred eEEEEeCCCc--ceEeeeecc------CCceeEEEEc---cC---CCEEEEE--eCCCCEEEEEcCCCeeeeecc----c
Q 015490 190 NLRVFKWPSL--EIILNESEA------HASVKDLSFS---PD---GKFLVSL--GNRGPGRVWDLASSAVATPLA----K 249 (406)
Q Consensus 190 ~i~vwd~~~~--~~~~~~~~~------~~~i~~~~~s---~~---~~~l~s~--s~d~~i~iwd~~~~~~~~~~~----~ 249 (406)
.|.+||+.+. +.++.+.-. ...+.++.+. |+ +.-+|.. +....|.|+|+.+++.-+.+. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4666677666 555444321 2357778776 22 1233333 246789999999887655431 1
Q ss_pred CC-------------cceEEEEEEEcCCCC-ceEEEEEEEcCCCcEEEEEe---CCC---ceEEEEeeec--CCCeEEEE
Q 015490 250 EN-------------DELFASCRFSPLNNE-DYVLYIAAITDRGASIVTWN---TTT---WKRIRTKQVV--REPVSSFN 307 (406)
Q Consensus 250 ~~-------------~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~i~~~d---~~~---~~~~~~~~~~--~~~i~~~~ 307 (406)
.. ...+..++++|+... ...||....++ ..++-.. ++. ...++.+-.. ...-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss--~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA--IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC--SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC--CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 10 124567778876211 11344433322 2222222 111 1112222111 13344567
Q ss_pred Ec-CCCCEEEEEeCCCcEEEEECCC-c---eEEEEee-cccccceEEEEEcCCCCeEEEEE
Q 015490 308 VS-ADGKLLAVGTASGDISIIDSSS-L---QVRTAVK-KAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 308 ~s-p~~~~l~~~~~dg~i~i~d~~~-~---~~~~~~~-~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
++ .+|.++++--..+.|..|+..+ . +....+. ...-..+..+.+.++|.+.+..+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 76 5777666666788899999875 1 1122222 12223467888877877655553
No 354
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=83.99 E-value=2.2 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=22.0
Q ss_pred CCCchHHH-----HHHHHHHHHHHHHHHhcCCCC
Q 015490 378 SGGLNLWI-----IIFILLLAMAAYFVKAKGIIP 406 (406)
Q Consensus 378 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 406 (406)
...+|+|. +..+++++++.+.|.|.||+.
T Consensus 5 ~~~vp~wiIi~s~l~GLllL~li~~~LwK~GFFk 38 (42)
T 2k1a_A 5 ERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFK 38 (42)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 34688998 445557888889999999973
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.16 E-value=46 Score=33.72 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=33.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 302 PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888999999999999999999999887653
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.66 E-value=8.9 Score=36.33 Aligned_cols=59 Identities=17% Similarity=0.233 Sum_probs=41.9
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEE
Q 015490 303 VSSFNVSADGKLLAVGTAS------------GDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSA 361 (406)
Q Consensus 303 i~~~~~sp~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 361 (406)
.-.|+|+|+|+++++-..+ ..+.+.+..+++..+.+.......++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999966654322 2366667777777666543345679999999999988765
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.55 E-value=31 Score=29.00 Aligned_cols=187 Identities=10% Similarity=0.011 Sum_probs=94.5
Q ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 169 QQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
.|..++.... ..++. . ||.|+.|-......+..-......|..++...+- .++. . ||.++.|-......+. ++
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg-~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT-VP 97 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC-CC
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC-CC
Confidence 4566665443 23333 4 8999999764332221111122356777765432 2333 4 8899988765422111 11
Q ss_pred cCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 015490 249 KENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIID 328 (406)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d 328 (406)
......+..++...... ++. . ++.|+.|-....-.+.........|..++...+. .+.-. ||.|+.|-
T Consensus 98 ~~~~~~v~~ia~G~~hs-------~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG 165 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWAS-------YAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWG 165 (282)
T ss_dssp GGGSSSEEEEEEETTEE-------EEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEE
T ss_pred cccCCCeEEEECcCCEE-------EEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEec
Confidence 11122455665554432 222 3 8899999765422111111122456677655433 22223 78888887
Q ss_pred CCCceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCC
Q 015490 329 SSSLQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIEDKKKS 378 (406)
Q Consensus 329 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~ 378 (406)
......+... ......|..++...+ +.+.- .||.|+.|-....-.+
T Consensus 166 ~n~~gqlg~p-~~~~~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 166 DNYFGQTTVP-AEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp CCTTSTTSCC-GGGGSSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTT
T ss_pred CCCCCCCCCc-eecCCCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCC
Confidence 6542222111 122345777776543 33333 5999999987665444
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.36 E-value=9.2 Score=38.78 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=32.2
Q ss_pred ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeec
Q 015490 211 SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPL 247 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 247 (406)
.+.+++..++..++++.+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5667778888889999999999999999999987754
No 359
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=77.18 E-value=2.1 Score=25.58 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.0
Q ss_pred CCCchHHH-----HHHHHHHHHHHHHHHhcCCC
Q 015490 378 SGGLNLWI-----IIFILLLAMAAYFVKAKGII 405 (406)
Q Consensus 378 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 405 (406)
...+|+|+ +..+++++++.+.|.|.||+
T Consensus 7 ~~~vp~wiIi~svl~GLllL~li~~~LwK~GFF 39 (54)
T 2knc_A 7 ERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFF 39 (54)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 34688998 44455778888889998887
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=76.36 E-value=41 Score=29.79 Aligned_cols=139 Identities=8% Similarity=0.070 Sum_probs=80.4
Q ss_pred CEEEEEcCCC--eeeeecccC-----CcceEEEEEEE---cCC-CCceEEEEEEEcCCCcEEEEEeCCCceEEEEeeec-
Q 015490 232 PGRVWDLASS--AVATPLAKE-----NDELFASCRFS---PLN-NEDYVLYIAAITDRGASIVTWNTTTWKRIRTKQVV- 299 (406)
Q Consensus 232 ~i~iwd~~~~--~~~~~~~~~-----~~~~~~~~~~~---~~~-~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~~~~~- 299 (406)
.|.+||+.+. +.++++... ....+..+++. |.+ ......| .+-.....|.++|+.+++..+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aY--ItD~~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVY--ITNFLRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEE--EEETTTTEEEEEETTTTEEEEEECGGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEE--EEcCCCCcEEEEECCCCcEEEEccCCC
Confidence 4666777777 666555432 23457778887 221 0112333 33345788999999987765544200
Q ss_pred -----------------CCCeEEEEEcCC----CCEEEEEeCCC-cEEEEE---CCCc---eEEEEeeccccc---ceEE
Q 015490 300 -----------------REPVSSFNVSAD----GKLLAVGTASG-DISIID---SSSL---QVRTAVKKAHLG---IVTA 348 (406)
Q Consensus 300 -----------------~~~i~~~~~sp~----~~~l~~~~~dg-~i~i~d---~~~~---~~~~~~~~~~~~---~v~~ 348 (406)
...+..++++|+ ++.|+.....+ .++-.. +++. ..+..+ +..+ .-..
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~--G~kg~~s~~~~ 279 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL--GNRGKYNDAIA 279 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE--EECCTTCCEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe--eecCCCCCcce
Confidence 136788999998 78887766554 233332 1111 111212 2222 2334
Q ss_pred EEEc-CCCCeEEEEECCCcEEEEEecC
Q 015490 349 LAFS-YDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 349 ~~~s-p~~~~l~s~s~dg~i~iw~~~~ 374 (406)
++.. .+|..+++--..+.|..|+..+
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 5665 5777777777788899999875
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.08 E-value=41 Score=29.67 Aligned_cols=66 Identities=14% Similarity=-0.037 Sum_probs=34.3
Q ss_pred cEEEEEECC-C-CCEEEEeeCCCeEEEEeCCCcceEeeeec-------------------cCCceeEEEEccC-CCEEEE
Q 015490 169 QQLALTFDS-E-GTIFAAGSENGNLRVFKWPSLEIILNESE-------------------AHASVKDLSFSPD-GKFLVS 226 (406)
Q Consensus 169 ~v~~~~~s~-~-g~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------------------~~~~i~~~~~s~~-~~~l~s 226 (406)
.|.++++.| + ...+..+...+.|...+ +.++.-..+.. ....+.+|.++|. ...|..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 577899987 2 44555555556555443 22322111111 1125788999873 344555
Q ss_pred EeCCCCEEE
Q 015490 227 LGNRGPGRV 235 (406)
Q Consensus 227 ~s~d~~i~i 235 (406)
+..++.|..
T Consensus 195 g~~~ggl~~ 203 (394)
T 3b7f_A 195 GMSSGGVFE 203 (394)
T ss_dssp EEETBEEEE
T ss_pred EECCCCEEE
Confidence 544444433
No 362
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=74.66 E-value=2.1 Score=25.50 Aligned_cols=27 Identities=22% Similarity=0.404 Sum_probs=20.3
Q ss_pred CchHHH-----HHHHHHHHHHHHHHHhcCCCC
Q 015490 380 GLNLWI-----IIFILLLAMAAYFVKAKGIIP 406 (406)
Q Consensus 380 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 406 (406)
.+|+|+ +..+++++++.+.|.|.||+.
T Consensus 6 ~vp~WiIi~svl~GLLLL~Lii~~LwK~GFFK 37 (54)
T 2l8s_A 6 RVPLWVILLSAFAGLLLLMLLILALWKIGFFK 37 (54)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 578887 445557888888899988873
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=74.56 E-value=12 Score=35.38 Aligned_cols=59 Identities=24% Similarity=0.221 Sum_probs=42.0
Q ss_pred cEEEEEECCCCCEEEEeeCC------------CeEEEEeCCCcceEeeeeccCC-ceeEEEEccCCCEEEEE
Q 015490 169 QQLALTFDSEGTIFAAGSEN------------GNLRVFKWPSLEIILNESEAHA-SVKDLSFSPDGKFLVSL 227 (406)
Q Consensus 169 ~v~~~~~s~~g~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~s~ 227 (406)
..-.|+|+|.|.+++.-..+ ..+.+.+..+++....+..+.+ +++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34678999999876653221 2466667777776655555544 89999999999987765
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.54 E-value=20 Score=33.71 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=42.2
Q ss_pred CeEEEEEcCCCCEEEEEeC------------CCcEEEEECCCceEEEEeecccccceEEEEEcCCCCeEEEEE
Q 015490 302 PVSSFNVSADGKLLAVGTA------------SGDISIIDSSSLQVRTAVKKAHLGIVTALAFSYDSRALVSAS 362 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s 362 (406)
....|.|+++|.+.++... ...|..++..+++....+.......++.++|+||++.|+.+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567999999987764322 125777777777766555312235689999999999887653
No 365
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=73.43 E-value=49 Score=29.27 Aligned_cols=185 Identities=11% Similarity=0.076 Sum_probs=94.1
Q ss_pred CEEEEeeCCCeEEEEeCCCcc-----------eEeeeeccC-CceeEEEEccCCCEEEEEeCCCCEEEEEcCCC------
Q 015490 180 TIFAAGSENGNLRVFKWPSLE-----------IILNESEAH-ASVKDLSFSPDGKFLVSLGNRGPGRVWDLASS------ 241 (406)
Q Consensus 180 ~~l~~~~~dg~i~vwd~~~~~-----------~~~~~~~~~-~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~------ 241 (406)
...+.-..||.|+.|-..... ....+.... ..+..++.+....+.+....||.|+.|-....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 344444677888888643210 111111111 24555677666677777888999999964321
Q ss_pred -----eeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc---------e--EEEEee-ecCCCeE
Q 015490 242 -----AVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW---------K--RIRTKQ-VVREPVS 304 (406)
Q Consensus 242 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~---------~--~~~~~~-~~~~~i~ 304 (406)
.....+.......+..++..... .+.-..++.|+.|-.... . ....+. .....|.
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G~~h--------s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAGGAH--------SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEECSSE--------EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCccCcCCeEecccCCCeEEEEEeCcCe--------EEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 11111221122234444433221 111235888999965421 0 111111 1224567
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCc-----------eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEec
Q 015490 305 SFNVSADGKLLAVGTASGDISIIDSSSL-----------QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIE 373 (406)
Q Consensus 305 ~~~~sp~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~ 373 (406)
.++......+.++-..+|.|+.|-.... .....+.......|..++... .+.+.-..||.|+.|-..
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECC
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCC
Confidence 7776543356666678999999965321 111112111122366665543 345556789999999765
Q ss_pred C
Q 015490 374 D 374 (406)
Q Consensus 374 ~ 374 (406)
.
T Consensus 293 ~ 293 (389)
T 3kci_A 293 D 293 (389)
T ss_dssp G
T ss_pred C
Confidence 4
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.25 E-value=5.5 Score=41.39 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=29.9
Q ss_pred ceEEEEEcCCCCeEEEEECCCcEEEEEecCCcCCCCc
Q 015490 345 IVTALAFSYDSRALVSASMDSSVRVTVIEDKKKSGGL 381 (406)
Q Consensus 345 ~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~~~~~~~ 381 (406)
.+.+++..++..++++-+.|+++|||++.+++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445666778899999999999999999998766543
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.47 E-value=30 Score=32.56 Aligned_cols=61 Identities=25% Similarity=0.200 Sum_probs=42.4
Q ss_pred CcEEEEEECCCCCEEEEeeC------------CCeEEEEeCCCcceEeeeeccC-CceeEEEEccCCCEEEEEe
Q 015490 168 GQQLALTFDSEGTIFAAGSE------------NGNLRVFKWPSLEIILNESEAH-ASVKDLSFSPDGKFLVSLG 228 (406)
Q Consensus 168 ~~v~~~~~s~~g~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~s~s 228 (406)
.....|.|.++|.+.+.... ...+..++..+++....+.... ..++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999987773211 1256777776777655444333 3789999999999887764
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=59.43 E-value=83 Score=26.83 Aligned_cols=191 Identities=10% Similarity=0.068 Sum_probs=103.8
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCcceE-------eee-eccCCceeEEEEccCCCEEEEEeCCCCEEEEEcCC--------
Q 015490 177 SEGTIFAAGSENGNLRVFKWPSLEII-------LNE-SEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDLAS-------- 240 (406)
Q Consensus 177 ~~g~~l~~~~~dg~i~vwd~~~~~~~-------~~~-~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~-------- 240 (406)
++...+++.+.+|.|+-..+..-+.. ..+ ....+.+..+........++..+..|.++-+....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45667888899999998766432211 111 11223455555555566788888888877665531
Q ss_pred -Ceeee-ecccCCcceEEEEEEEcCC-CCceEEEEEEEcCCCcEEEEEeCCCce-------EEEEeeecCCCeEEEEEcC
Q 015490 241 -SAVAT-PLAKENDELFASCRFSPLN-NEDYVLYIAAITDRGASIVTWNTTTWK-------RIRTKQVVREPVSSFNVSA 310 (406)
Q Consensus 241 -~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~i~~~~~sp 310 (406)
|..+. .+....+..+..+...++. ... .+ +++ +..|.++...+.... ....+.. ...+..+....
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~-~l-l~~--T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~ 160 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDA-YL-LLT--TASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF 160 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTC-EE-EEE--ETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCC-EE-EEE--eCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC
Confidence 11111 1222233334444333210 111 12 222 357777776653321 1112222 34555555555
Q ss_pred CCCEEEEEeCCCcEEEEECCC---------ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 311 DGKLLAVGTASGDISIIDSSS---------LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 311 ~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
+...++..+.+|.+..+.... |.....+. ....|.++....++..+++.+..|..+...+..
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~--~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK--EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC--TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC--CCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 566788889999998888753 11222222 345566666655666788889999999988864
No 369
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=59.10 E-value=84 Score=26.74 Aligned_cols=74 Identities=9% Similarity=0.113 Sum_probs=45.2
Q ss_pred cccCcEEEEEE-C--CCCCEEEEeeCCCeEEEEeCCC-------cceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEE
Q 015490 165 ENVGQQLALTF-D--SEGTIFAAGSENGNLRVFKWPS-------LEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGR 234 (406)
Q Consensus 165 ~~~~~v~~~~~-s--~~g~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~ 234 (406)
.....|..+.. . .++.+++..+.+|.++-..+.. +.....+... +.+-.+....+...++..+.+|.+.
T Consensus 92 ~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~i 170 (307)
T 1zi0_A 92 EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVV 170 (307)
T ss_dssp CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEE
T ss_pred CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEE
Confidence 33445555533 2 3456788889999999987632 2122223333 4555555544556788888888888
Q ss_pred EEEcC
Q 015490 235 VWDLA 239 (406)
Q Consensus 235 iwd~~ 239 (406)
.++..
T Consensus 171 rf~~~ 175 (307)
T 1zi0_A 171 RFKES 175 (307)
T ss_dssp EEEGG
T ss_pred EEEHH
Confidence 88764
No 370
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=51.69 E-value=1.8e+02 Score=28.29 Aligned_cols=152 Identities=11% Similarity=0.029 Sum_probs=80.9
Q ss_pred EEEEECCCCCE-----EEEee---CCCeEEEEeCCC--cceEeeeeccCCceeEEEEccCCCEEEEE----------eCC
Q 015490 171 LALTFDSEGTI-----FAAGS---ENGNLRVFKWPS--LEIILNESEAHASVKDLSFSPDGKFLVSL----------GNR 230 (406)
Q Consensus 171 ~~~~~s~~g~~-----l~~~~---~dg~i~vwd~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~s~----------s~d 230 (406)
.....++++++ +++.+ ....+.+.+... ++.. .+..... ..+..+.++.+++.. ...
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (711)
T 4hvt_A 243 VSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKA 319 (711)
T ss_dssp EEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCSCTT--CEEEEEETTEEEEECSSCEEETTEEECT
T ss_pred EEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-EeecCCc--ceEeeeECCEEEEEECcccccccccCCC
Confidence 34556677662 44433 224566667543 3322 2322222 123345566555533 135
Q ss_pred CCEEEEEcCCCe-------eee-ecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCce-EEEE-eeec-
Q 015490 231 GPGRVWDLASSA-------VAT-PLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWK-RIRT-KQVV- 299 (406)
Q Consensus 231 ~~i~iwd~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~-~~~~-~~~~- 299 (406)
+.|...|+.++. ... .+.......+..+.|..+. +++.........|.++|+.+++ .... +...
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~ 394 (711)
T 4hvt_A 320 GSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR-----VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY 394 (711)
T ss_dssp TCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC-----EEEEEEETTEEEEEEECEETTEECCCEEECCCS
T ss_pred CeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE-----EEEEEEECCEEEEEEEECCCCceEEEeccCCCC
Confidence 678899987642 122 2444445567777777652 3344444555678888886664 2222 3222
Q ss_pred CCCeEEEEEcCCCCEE-EEEeC---CCcEEEEECC
Q 015490 300 REPVSSFNVSADGKLL-AVGTA---SGDISIIDSS 330 (406)
Q Consensus 300 ~~~i~~~~~sp~~~~l-~~~~~---dg~i~i~d~~ 330 (406)
.+.+.....++++..+ ++.+. -+.+..+|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 395 QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 2457777777776544 44333 3568888876
No 371
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.21 E-value=1.3e+02 Score=26.42 Aligned_cols=58 Identities=14% Similarity=0.047 Sum_probs=30.4
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCceEEEEeeccc-c---cceEEEEEcCC-CCeEEEE
Q 015490 302 PVSSFNVSAD-GKLLAVGTASGDISIIDSSSLQVRTAVKKAH-L---GIVTALAFSYD-SRALVSA 361 (406)
Q Consensus 302 ~i~~~~~sp~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~---~~v~~~~~sp~-~~~l~s~ 361 (406)
.+.++.++|+ ...|.++...+ |...+- .++.-..+.... . ..+..+.++|. ...|..+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4889999985 45677776554 444432 233222221111 1 23567888763 3344444
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=50.49 E-value=1.9e+02 Score=28.39 Aligned_cols=150 Identities=9% Similarity=0.083 Sum_probs=72.5
Q ss_pred cCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcceEeeeecc-------CCceeEEEEccCC-CEEEEEeCCCC----E
Q 015490 167 VGQQLALTFDSE-GTIFAAGSENGNLRVFKWPSLEIILNESEA-------HASVKDLSFSPDG-KFLVSLGNRGP----G 233 (406)
Q Consensus 167 ~~~v~~~~~s~~-g~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~s~~~-~~l~s~s~d~~----i 233 (406)
.+.|.+++++|. ...++++...+.|...+ +.++.-..+... ...|.+++++|.. ..++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 35566666666665554 344433333221 2368999998843 34444433211 3
Q ss_pred EEEEcC-CCeeeeecccC--------CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeC-CCceEEEEee---ecC
Q 015490 234 RVWDLA-SSAVATPLAKE--------NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNT-TTWKRIRTKQ---VVR 300 (406)
Q Consensus 234 ~iwd~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~~~~~~~~~~---~~~ 300 (406)
.||-.. .|+.-..+... ....+..++++|.... .+++ .....+..+--|- ++++.+.... ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~--~v~~--g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSN--EVWM--GTRTEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEE--EEEE--ECSSSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCC--EEEE--EeccCCEEEECCCCcccCCCccCccccCCC
Confidence 344332 23322211110 0112345777776543 2222 2222332222221 3344332211 112
Q ss_pred CCeEEEEEcCC-CCEEEEEeCC
Q 015490 301 EPVSSFNVSAD-GKLLAVGTAS 321 (406)
Q Consensus 301 ~~i~~~~~sp~-~~~l~~~~~d 321 (406)
..+..+.++|. +..++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 45788999884 4566666654
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.39 E-value=31 Score=33.37 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=29.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 302 PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
.|.++.+ +..++++-+.|+++|+||+.+++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3555554 36799999999999999999999887765
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.84 E-value=14 Score=38.26 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEee
Q 015490 302 PVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVK 339 (406)
Q Consensus 302 ~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 339 (406)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667888999999999999999999998877653
No 375
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.23 E-value=29 Score=33.62 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCEEEEEcCCCeeeeecc
Q 015490 211 SVKDLSFSPDGKFLVSLGNRGPGRVWDLASSAVATPLA 248 (406)
Q Consensus 211 ~i~~~~~s~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 248 (406)
.|.++.+ +..++++-+.|+++|+|++++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3554444 46799999999999999999998776543
No 376
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=43.67 E-value=1.6e+02 Score=25.34 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=85.6
Q ss_pred ceeEEE-Ecc--CCCEEEEEeCCCCEEEEEcCCCee-----eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEE
Q 015490 211 SVKDLS-FSP--DGKFLVSLGNRGPGRVWDLASSAV-----ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASI 282 (406)
Q Consensus 211 ~i~~~~-~s~--~~~~l~s~s~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 282 (406)
.|..+. ... +..+++..+.+|.++-..+..-.. ...+....+..+..+........ ++ ++ +..|.+
T Consensus 96 ~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~---il-l~--T~~G~~ 169 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDD---LL-LV--SANGQS 169 (327)
T ss_dssp CEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCE---EE-EE--ETTSEE
T ss_pred EEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCE---EE-EE--ECCCeE
Confidence 455543 332 577999999999999887654221 11222223334444444443332 21 22 245666
Q ss_pred EEEeCC--C---------ceEEEEeeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCce-------EEEEeec-ccc
Q 015490 283 VTWNTT--T---------WKRIRTKQVVREPVSSFNVSADGKLLAVGTASGDISIIDSSSLQ-------VRTAVKK-AHL 343 (406)
Q Consensus 283 ~~~d~~--~---------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~-~~~ 343 (406)
..+... . |.....+. ....|.++...+++.+++..+..|.++.-.+.... -+..+.. .-.
T Consensus 170 ~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~ 248 (327)
T 3uc1_A 170 IRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRR 248 (327)
T ss_dssp EEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTT
T ss_pred EEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCC
Confidence 665544 2 11111121 23457777666667789999999999888764322 1222211 113
Q ss_pred cceEEEEEcCCCCeEEEEECCCcEEEEEecCC
Q 015490 344 GIVTALAFSYDSRALVSASMDSSVRVTVIEDK 375 (406)
Q Consensus 344 ~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~~ 375 (406)
+.+..+....+...++..+.+|.+.-++...-
T Consensus 249 d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 249 GRLVGALIVDDDSELYAVTSGGGVIRTAARQV 280 (327)
T ss_dssp CSEEEEEEECTTCEEEEEEGGGCEEEEEGGGS
T ss_pred CeEEEEEEeCCCccEEEEcCCCeEEEEehhhc
Confidence 34555444444556777788888877777543
No 377
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=42.68 E-value=1.9e+02 Score=26.06 Aligned_cols=123 Identities=13% Similarity=0.175 Sum_probs=58.6
Q ss_pred ceEEEEccCCCeEEEE----ecCCeEEEEEecccccceeecceeccceeeecccccCcEEEEEECCCCC--EEEEeeCCC
Q 015490 116 PYRMAIHPHGDGIICA----LQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGT--IFAAGSENG 189 (406)
Q Consensus 116 v~~~~~sp~~~~l~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~dg 189 (406)
+.++.-..+|..+++. +....+||.|...+......++.......-...++ +.-.++.-..+|+ .++......
T Consensus 191 ~~~m~a~~~G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~-Gd~isv~GD~~gNa~I~~~~n~s~ 269 (453)
T 4ftd_A 191 DYNMGALINGHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRH-GDNASYNIDENGNGFIFFGDNAAT 269 (453)
T ss_dssp EEEEEEEETTEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCB-CSCCEEEECTTSCEEEEEEBTTSS
T ss_pred EEEEEEecCCCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccCCcccccc-cceEEEEEcCCCCEEEEECCCCce
Confidence 3566666677766653 25668999999876554333333211100011111 2223455555554 333333344
Q ss_pred eEEEEeCCCcceEe-------eeeccCCceeEEEEccC-CCEEEEEeCCCCEEEEEcCC
Q 015490 190 NLRVFKWPSLEIIL-------NESEAHASVKDLSFSPD-GKFLVSLGNRGPGRVWDLAS 240 (406)
Q Consensus 190 ~i~vwd~~~~~~~~-------~~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~iwd~~~ 240 (406)
.+..|.+..+.... ...........+.+--+ ..++.++ .+-...+++...
T Consensus 270 ~~~rwtVtng~l~~~~~~~v~~~~~~g~~~~~v~~~gnT~~y~~sg-~~~p~~Ly~~~g 327 (453)
T 4ftd_A 270 EFLKVPISGHKTVDIGNIKVLPSKSDATMVTNVYRVGDTDQYLWSG-IRVPVTLVDESL 327 (453)
T ss_dssp EEEEEEEETTTEECGGGCEEEECCGGGCSSEEEEECTTSSCEEEEE-TTEEEEEECTTC
T ss_pred eEEEEEEECCeEcCCCCceeeccCCCceeeeeeEEcCcccceeecc-ccCceeEEecCC
Confidence 68888886665421 11111113344444322 3345444 344566666543
No 378
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=39.88 E-value=93 Score=21.67 Aligned_cols=11 Identities=0% Similarity=0.051 Sum_probs=5.2
Q ss_pred EEEcCCCCeEE
Q 015490 349 LAFSYDSRALV 359 (406)
Q Consensus 349 ~~~sp~~~~l~ 359 (406)
+.+..+|.+++
T Consensus 61 l~l~~dGNLVl 71 (113)
T 3mez_B 61 MRLGHSGELDI 71 (113)
T ss_dssp EEECTTSCEEE
T ss_pred EEEeCCCcEEE
Confidence 44444555444
No 379
>4gx7_A Cytolysin and hemolysin HLYA pore-forming toxin; lectin, carbohydrate-binding domain, beta-prism, pore-formin hemolysin, glycan-binding; HET: MMA; 2.85A {Vibrio cholerae}
Probab=37.49 E-value=1.2e+02 Score=22.31 Aligned_cols=83 Identities=25% Similarity=0.338 Sum_probs=59.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCceEEEEeec---ccccceEEEEEcC-CCCeEEEEECCC----cEEEEE
Q 015490 300 REPVSSFNVSADGKLLAVGTASGDISIIDSSSLQVRTAVKK---AHLGIVTALAFSY-DSRALVSASMDS----SVRVTV 371 (406)
Q Consensus 300 ~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~sp-~~~~l~s~s~dg----~i~iw~ 371 (406)
...|-++--+++ .+.|+..|.++-.|+..-+.+..... --...+..|.|.- ||..+..||.+. ..-.++
T Consensus 49 GaaIDAIGt~~~---~lvGG~GGsL~~IDls~V~sI~vT~G~f~~gg~hilaltF~~~dGS~v~~GSK~ya~~~~~e~f~ 125 (152)
T 4gx7_A 49 GAAIDALGSASD---LLVGGNGGSLSSVDLSGVKSITATSGDFQYGGQQLVALTFTYQDGRQQTVGSKAYVTNAHEDRFD 125 (152)
T ss_dssp SSSEEEEESSTT---CCEECSCSEEEEEECTTEEEEEEEEEEETTSSEEEEEEEEEETTSCEEEEECSTTEEEEEEEEEE
T ss_pred CceeeeccCCcc---cccccCCCcccEeehhhcEEEEEEeeeeeccCceEEEEEEEEcCCcEEEEecccccccccceeEE
Confidence 345666665544 34677889999889887766655431 1134578888875 688888888776 466799
Q ss_pred ecCCcCCCCchHHH
Q 015490 372 IEDKKKSGGLNLWI 385 (406)
Q Consensus 372 ~~~~~~~~~~~~~~ 385 (406)
+..++.+..++.|.
T Consensus 126 vP~G~~I~~inVWs 139 (152)
T 4gx7_A 126 LPDAAKITQLKIWA 139 (152)
T ss_dssp CCTTCCEEEEEEEE
T ss_pred CCCCCeEEEEEEee
Confidence 99999999888875
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=37.27 E-value=1.8e+02 Score=24.19 Aligned_cols=187 Identities=10% Similarity=0.003 Sum_probs=96.7
Q ss_pred CCEEEEeeCCCeEEEE---eCCCcceEeeeeccCCceeEEEEcc-CCCEEEEEeCCCCEEEEEcCCCe----eeeecccC
Q 015490 179 GTIFAAGSENGNLRVF---KWPSLEIILNESEAHASVKDLSFSP-DGKFLVSLGNRGPGRVWDLASSA----VATPLAKE 250 (406)
Q Consensus 179 g~~l~~~~~dg~i~vw---d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~ 250 (406)
...|+.-+.+|.++-- ++....... +......|..+.... +...++..+.+|.++-..+..-. -...+...
T Consensus 35 ~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk 113 (276)
T 3no0_A 35 TEGLFLVSNRGRVYWIAGSQALQGSKVS-LKSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT 113 (276)
T ss_dssp TSCEEEEETTSEEEEECSHHHHTSEECC-CSSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC
T ss_pred CCEEEEEcCCCeEEEEEhhhCccCcccc-cCCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC
Confidence 3344455566765543 332221111 222233566554322 46789999999999998875432 11122222
Q ss_pred CcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC---------ceEEEEeeecCCCeEEEEEcCCCCEEEEEeCC
Q 015490 251 NDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT---------WKRIRTKQVVREPVSSFNVSADGKLLAVGTAS 321 (406)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~---------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d 321 (406)
.+..+..+........ + +++ +..|.+..+.... |.....+.. ...|..+...+++..++..+..
T Consensus 114 egD~l~~~~~~~~~~~---i-ll~--T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~ 186 (276)
T 3no0_A 114 EGDEVVSIASSVDETH---I-LLF--TKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAK 186 (276)
T ss_dssp TTCCEEEEEECCSSCE---E-EEE--ETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETT
T ss_pred CCCEEEEEEEeCCCCE---E-EEE--ECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCC
Confidence 3334444443333332 2 122 3466666655421 111111221 2456666555566788899999
Q ss_pred CcEEEEECCCc-------eEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEE--EEecCC
Q 015490 322 GDISIIDSSSL-------QVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRV--TVIEDK 375 (406)
Q Consensus 322 g~i~i~d~~~~-------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~i--w~~~~~ 375 (406)
|.++...+... +-+..+. ..+.+..+....+...++..+.+|.+.. +++.+-
T Consensus 187 G~~kr~~~~e~~~~~R~gkGv~~i~--~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 187 GRVKKISHEEIPKTNRGVKGTEVSG--TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKDI 247 (276)
T ss_dssp SCEEEEEGGGSCCCCTTCCCEECCC--SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGGS
T ss_pred CcEEEeEHHHcccCCCCCcceEEEc--CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHHC
Confidence 99988876432 2222222 2344554443333446777788888888 877653
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=36.22 E-value=2.1e+02 Score=24.58 Aligned_cols=158 Identities=12% Similarity=0.119 Sum_probs=84.0
Q ss_pred ccCcEEEE-EECC--CCCEEEEeeCCCeEEEEeCCCcc-------eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEE
Q 015490 166 NVGQQLAL-TFDS--EGTIFAAGSENGNLRVFKWPSLE-------IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRV 235 (406)
Q Consensus 166 ~~~~v~~~-~~s~--~g~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~i 235 (406)
....|..+ .... +..+++..+.+|.++.-.+.... ....+.. .+.+..+........|+..+..|.+..
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 33455544 4442 56789999999999998864322 2222322 334555555555667888888998888
Q ss_pred EEcC--CCee-------eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCc-------eEEEEeeec
Q 015490 236 WDLA--SSAV-------ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTW-------KRIRTKQVV 299 (406)
Q Consensus 236 wd~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~-------~~~~~~~~~ 299 (406)
+... .-.. +..+....+..+.++...+.+.. + +++ ...|.++.-.+... +-+..+...
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~---l-l~~--T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~ 245 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTY---L-LVA--TSGGYAKRTAIEEYPVQGRGGKGVLTVMYD 245 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCE---E-EEE--ETTSEEEEEEGGGSCBCCTTSCCEESSCCC
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCE---E-EEE--eCCCcEEEEEHHHccccCcCCCcEEEEEec
Confidence 8766 2111 11122223344545444443332 2 222 34666666554321 122222221
Q ss_pred --CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 015490 300 --REPVSSFNVSADGKLLAVGTASGDISIIDSS 330 (406)
Q Consensus 300 --~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~~ 330 (406)
...+..+....+...++..+.+|.+.-++..
T Consensus 246 ~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 246 RRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred CCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 2344444444445566677778887777654
No 382
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.17 E-value=2.1e+02 Score=24.30 Aligned_cols=73 Identities=10% Similarity=0.200 Sum_probs=45.8
Q ss_pred cCcEEEEEECC---CCCEEEEeeCCCeEEEEeCCC-------cceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEE
Q 015490 167 VGQQLALTFDS---EGTIFAAGSENGNLRVFKWPS-------LEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVW 236 (406)
Q Consensus 167 ~~~v~~~~~s~---~g~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iw 236 (406)
...|..+...+ +..+++..+.+|.++...+.. |.....+.. .+.+-.+....++..++..+.+|.+..+
T Consensus 99 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~ 177 (312)
T 1suu_A 99 QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIF 177 (312)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 34454443322 456788889999999887732 222223333 3455555555556678889999999888
Q ss_pred EcCC
Q 015490 237 DLAS 240 (406)
Q Consensus 237 d~~~ 240 (406)
....
T Consensus 178 ~~~e 181 (312)
T 1suu_A 178 NSRD 181 (312)
T ss_dssp EGGG
T ss_pred EHHH
Confidence 8743
No 383
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=33.60 E-value=2.2e+02 Score=24.09 Aligned_cols=191 Identities=12% Similarity=0.074 Sum_probs=98.5
Q ss_pred CCCCEEEEeeCCCeEEEEeCCCcceEe---------eeeccCCceeEEEEccCCCEEEEEeCCCCEEEEEc---CC----
Q 015490 177 SEGTIFAAGSENGNLRVFKWPSLEIIL---------NESEAHASVKDLSFSPDGKFLVSLGNRGPGRVWDL---AS---- 240 (406)
Q Consensus 177 ~~g~~l~~~~~dg~i~vwd~~~~~~~~---------~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iwd~---~~---- 240 (406)
|+...+++.+.+|.|+--.+...+... .+. ..+.+..+........|+..+..|.++-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 345667888899999877765432211 111 2234444444445566777777887665544 22
Q ss_pred --Ceeeee-cccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-------ceEEEEeeecCCCeEEEEEcC
Q 015490 241 --SAVATP-LAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-------WKRIRTKQVVREPVSSFNVSA 310 (406)
Q Consensus 241 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-------~~~~~~~~~~~~~i~~~~~sp 310 (406)
|.++.. +....+..+..+..-++......+ +++ +.+|.++-..+.. +.....+..+ ..+..+....
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~l-l~~--T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~ 155 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKV-FMA--TANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS 155 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEE-EEE--ETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEE-EEE--eCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC
Confidence 232221 122233344444332211111112 222 4577777765532 1111112222 4555555545
Q ss_pred CCCEEEEEeCCCcEEEEECCC---------ceEEEEeecccccceEEEEEcCCCCeEEEEECCCcEEEEEecC
Q 015490 311 DGKLLAVGTASGDISIIDSSS---------LQVRTAVKKAHLGIVTALAFSYDSRALVSASMDSSVRVTVIED 374 (406)
Q Consensus 311 ~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~dg~i~iw~~~~ 374 (406)
+...++..+.+|.+..++... |.....+ .....|.++....++..+++.+..|.++-.++..
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL--GEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe--CCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 556788888899888887642 1111122 2345566666555566788889999988887743
No 384
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.92 E-value=1.9e+02 Score=27.02 Aligned_cols=68 Identities=22% Similarity=0.185 Sum_probs=42.4
Q ss_pred CeEEEEEcCCC--CEEEEEeCCCcEEEEECCCc----eEEEEeec-ccccceE-EEEEcCCCCeEEEEECCCcEEE
Q 015490 302 PVSSFNVSADG--KLLAVGTASGDISIIDSSSL----QVRTAVKK-AHLGIVT-ALAFSYDSRALVSASMDSSVRV 369 (406)
Q Consensus 302 ~i~~~~~sp~~--~~l~~~~~dg~i~i~d~~~~----~~~~~~~~-~~~~~v~-~~~~sp~~~~l~s~s~dg~i~i 369 (406)
..++++....+ ..++.|+.+|.|.-..+... .....+.- ....+|. .|.+++++.+|+.++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45666655433 45778899998765544322 12223221 1245785 8999999999999887765444
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.47 E-value=1.8e+02 Score=26.72 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=41.8
Q ss_pred CeEEEEEcC----CC--CEEEEEeCCCcEEEEECC-Cce-------EEEEeec-ccccceEEEEEcCCCCeEEEEECCCc
Q 015490 302 PVSSFNVSA----DG--KLLAVGTASGDISIIDSS-SLQ-------VRTAVKK-AHLGIVTALAFSYDSRALVSASMDSS 366 (406)
Q Consensus 302 ~i~~~~~sp----~~--~~l~~~~~dg~i~i~d~~-~~~-------~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~ 366 (406)
..++++... ++ ..++.|+.+|.|.-.-+. ... .+..+.- ....+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356665543 23 357788999987544332 211 1222221 13578999999999999999988875
Q ss_pred EEE
Q 015490 367 VRV 369 (406)
Q Consensus 367 i~i 369 (406)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 386
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=24.13 E-value=3.1e+02 Score=22.73 Aligned_cols=159 Identities=10% Similarity=0.102 Sum_probs=81.7
Q ss_pred ccccCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcc------eEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEEE
Q 015490 164 LENVGQQLALTFDS-EGTIFAAGSENGNLRVFKWPSLE------IILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRVW 236 (406)
Q Consensus 164 ~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~vwd~~~~~------~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~iw 236 (406)
+.....|..+.... +..+++..+.+|.++...+..-. ....+. ..+.+..+....+...++..+..|.+..+
T Consensus 64 l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 64 KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 44445566654421 46789999999999998875431 122222 23355555555556678888999998888
Q ss_pred EcCCCee-------eeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCC-------ceEEEEeeecCCC
Q 015490 237 DLASSAV-------ATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTT-------WKRIRTKQVVREP 302 (406)
Q Consensus 237 d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~-------~~~~~~~~~~~~~ 302 (406)
+...-.. +..+....+..+..+...+++.. + +++ ...|.++...+.. ++-+..+ ...+.
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~---l-l~~--T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~ 215 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPY---L-LVI--TAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDT 215 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSE---E-EEE--ETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSC
T ss_pred EhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCE---E-EEE--eCCCcEEEeEHHHcccCCCCCcceEEE-cCCCc
Confidence 7532111 11122222334444444443332 2 222 2355555554322 1122222 22234
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEE--EECC
Q 015490 303 VSSFNVSADGKLLAVGTASGDISI--IDSS 330 (406)
Q Consensus 303 i~~~~~sp~~~~l~~~~~dg~i~i--~d~~ 330 (406)
+..+....+...++..+.+|.+.. ++..
T Consensus 216 lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 216 LVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 444433333345666667777766 6654
No 387
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=24.01 E-value=3.4e+02 Score=23.16 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=44.7
Q ss_pred cCcEEEE-EECC--CCCEEEEeeCCCeEEEEeCCC--------cceEeeeeccCCceeEEEEccCCCEEEEEeCCCCEEE
Q 015490 167 VGQQLAL-TFDS--EGTIFAAGSENGNLRVFKWPS--------LEIILNESEAHASVKDLSFSPDGKFLVSLGNRGPGRV 235 (406)
Q Consensus 167 ~~~v~~~-~~s~--~g~~l~~~~~dg~i~vwd~~~--------~~~~~~~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~i 235 (406)
...|..+ .... ++.+++..+.+|.++...+.. +.....+... +.+-.+....+...++..+.+|.+..
T Consensus 91 ~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~ir 169 (323)
T 1wp5_A 91 DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALW 169 (323)
T ss_dssp TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEE
T ss_pred CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 3445544 3432 256788899999999988732 2222223322 45555555545567888888998888
Q ss_pred EEcC
Q 015490 236 WDLA 239 (406)
Q Consensus 236 wd~~ 239 (406)
++..
T Consensus 170 f~~~ 173 (323)
T 1wp5_A 170 FDES 173 (323)
T ss_dssp EEGG
T ss_pred EEHH
Confidence 8764
No 388
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=22.55 E-value=4.9e+02 Score=24.47 Aligned_cols=58 Identities=10% Similarity=0.024 Sum_probs=34.6
Q ss_pred eEEEEeCCCcceEeeeec--------cCCceeEEEEccCCC-EEEEEeCCCC----------------------------
Q 015490 190 NLRVFKWPSLEIILNESE--------AHASVKDLSFSPDGK-FLVSLGNRGP---------------------------- 232 (406)
Q Consensus 190 ~i~vwd~~~~~~~~~~~~--------~~~~i~~~~~s~~~~-~l~s~s~d~~---------------------------- 232 (406)
.|.+|+++ ++.+..+.. |...+....|.-||+ -|+..+.+++
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 46666664 444433321 222466667777776 4666655554
Q ss_pred EEEEEcCCCeeeeecc
Q 015490 233 GRVWDLASSAVATPLA 248 (406)
Q Consensus 233 i~iwd~~~~~~~~~~~ 248 (406)
+.++|=.+|+.+..+.
T Consensus 231 L~vfdG~TG~~l~~~~ 246 (591)
T 2zux_A 231 LTVFQGSTGKELVTAN 246 (591)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEeCCCCCEEeccc
Confidence 7888888888776543
No 389
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.09 E-value=2.7e+02 Score=26.78 Aligned_cols=56 Identities=13% Similarity=0.249 Sum_probs=0.0
Q ss_pred EEEEEeCCCcE-EEEECCCce-------EEEEeec-ccccceEEEEEcCCCCeEEEEECCCcEEE
Q 015490 314 LLAVGTASGDI-SIIDSSSLQ-------VRTAVKK-AHLGIVTALAFSYDSRALVSASMDSSVRV 369 (406)
Q Consensus 314 ~l~~~~~dg~i-~i~d~~~~~-------~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~dg~i~i 369 (406)
.++.|+.+|.| ++....... .+..+.. ....+|..|.++++..+|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
No 390
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=20.76 E-value=3.5e+02 Score=22.10 Aligned_cols=155 Identities=12% Similarity=0.023 Sum_probs=0.0
Q ss_pred CCCEEEEEeCCCCEEEEEcCCCeeeeecccCCcceEEEEEEEcCCCCceEEEEEEEcCCCcEEEEEeCCCceEEEE----
Q 015490 220 DGKFLVSLGNRGPGRVWDLASSAVATPLAKENDELFASCRFSPLNNEDYVLYIAAITDRGASIVTWNTTTWKRIRT---- 295 (406)
Q Consensus 220 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~~~~---- 295 (406)
+...+++.+.+|.|+--....-. ...+....+..+..+........ ++++...+.--.+.++++...+....
T Consensus 1 ~E~v~v~lT~~G~iKr~~~~~~~-~~~~~lke~D~l~~~~~~~t~~~---ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~ 76 (256)
T 1zvt_A 1 SEPVTIVLSQMGWVRSAKGHDID-APGLNYKAGDSFKAAVKGKSNQP---VVFVDSTGRSYAIDPITLPSARGQGEPLTG 76 (256)
T ss_dssp CCEEEEEEETTSEEEEEESSCCC-STTSCCCTTCCEEEEEEEETTSC---EEEEETTSEEEEECGGGSCCSSSCCEEGGG
T ss_pred CCCEEEEEeCCCEEEEeeCCcCC-ceeccCCCCCEEEEEEEeCCCCE---EEEEeCCCeEEEEEHHHCCCcCCCCeEeee
Q ss_pred --eeecCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-------CCceEEEEeecccccceEEEEEc-CCCCeEEEEECCC
Q 015490 296 --KQVVREPVSSFNVSADGKLLAVGTASGDISIIDS-------SSLQVRTAVKKAHLGIVTALAFS-YDSRALVSASMDS 365 (406)
Q Consensus 296 --~~~~~~~i~~~~~sp~~~~l~~~~~dg~i~i~d~-------~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~s~s~dg 365 (406)
--.....|.++....++.+|+.++..|.++...+ +.+.....+. ..+.+..+... .++..++..+.+|
T Consensus 77 ~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~--~~d~lv~~~~~~~~~~~i~l~T~~G 154 (256)
T 1zvt_A 77 KLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP--ENAHVMPPVVIEDASDMLLAITQAG 154 (256)
T ss_dssp TCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC--TTCCBCCCEECCCTTCEEEEEETTS
T ss_pred eecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC--CCCEEEEEEEecCCCCEEEEEcCCC
Q ss_pred cEEEEEecCCcCCCC
Q 015490 366 SVRVTVIEDKKKSGG 380 (406)
Q Consensus 366 ~i~iw~~~~~~~~~~ 380 (406)
.+..+.+..-...+.
T Consensus 155 ~~lrf~~~ei~~~gR 169 (256)
T 1zvt_A 155 RMLMFPVSDLPQLSK 169 (256)
T ss_dssp EEEEEEGGGSCBCSS
T ss_pred eEEEEEHHHCCCcCc
Done!