BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015500
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 141/261 (54%), Gaps = 18/261 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL---PKSEFLQREQKFLSSLNSPHIVG 59
+TR IGQG+S TV A + +G A + L PK E + E + +P+IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
Y + ++ + MEY GG+L D + +DE I + R+ LQ LE+LHSN
Sbjct: 82 YLDSYLVGDE----LWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 120 RVVHCDIKSRNILMAESGA-KIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
+V+H DIKS NIL+ G+ K+ DFG CA+ E + GTP +MAPEV + G
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNC 232
DIW++G IEM G P+ N +P+ LY IA + PE+ P LS DFL+ C
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRC 253
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L D ++R +A +LL+H FL+
Sbjct: 254 LEMDVEKRGSAKELLQHQFLK 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 143/261 (54%), Gaps = 18/261 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL---PKSEFLQREQKFLSSLNSPHIVG 59
+TR IGQG+S TV A + +G A + L PK E + E + +P+IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
Y + ++ + MEY GG+L D + +DE I + R+ LQ LE+LHSN
Sbjct: 82 YLDSYLVGDE----LWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 120 RVVHCDIKSRNILMAESGA-KIADFG-CAKW---ESEALQSGGTPMFMAPEVARGEHQGF 174
+V+H DIKS NIL+ G+ K+ DFG CA+ +S+ + GTP +MAPEV + G
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNC 232
DIW++G IEM G P+ N +P+ LY IA + PE+ P LS DFL+ C
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRC 253
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L D ++R +A +LL+H FL+
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 141/261 (54%), Gaps = 18/261 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL---PKSEFLQREQKFLSSLNSPHIVG 59
+TR IGQG+S TV A + +G A + L PK E + E + +P+IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
Y + ++ + MEY GG+L D + +DE I + R+ LQ LE+LHSN
Sbjct: 82 YLDSYLVGDE----LWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 135
Query: 120 RVVHCDIKSRNILMAESGA-KIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
+V+H DIKS NIL+ G+ K+ DFG CA+ E + GTP +MAPEV + G
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNC 232
DIW++G IEM G P+ N +P+ LY IA + PE+ P LS DFL+ C
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRC 253
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L D ++R +A +LL+H FL+
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 141/261 (54%), Gaps = 18/261 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL---PKSEFLQREQKFLSSLNSPHIVG 59
+TR IGQG+S TV A + +G A + L PK E + E + +P+IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
Y + ++ + MEY GG+L D + +DE I + R+ LQ LE+LHSN
Sbjct: 83 YLDSYLVGDE----LWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 136
Query: 120 RVVHCDIKSRNILMAESGA-KIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
+V+H DIKS NIL+ G+ K+ DFG CA+ E + GTP +MAPEV + G
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNC 232
DIW++G IEM G P+ N +P+ LY IA + PE+ P LS DFL+ C
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRC 254
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L D ++R +A +L++H FL+
Sbjct: 255 LEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 141/261 (54%), Gaps = 18/261 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL---PKSEFLQREQKFLSSLNSPHIVG 59
+TR IGQG+S TV A + +G A + L PK E + E + +P+IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
Y + ++ + MEY GG+L D + +DE I + R+ LQ LE+LHSN
Sbjct: 83 YLDSYLVGDE----LWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSN 136
Query: 120 RVVHCDIKSRNILMAESGA-KIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
+V+H +IKS NIL+ G+ K+ DFG CA+ E + GTP +MAPEV + G
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNC 232
DIW++G IEM G P+ N +P+ LY IA + PE+ P LS DFL+ C
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPELQNPEKLSAIFRDFLNRC 254
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L D ++R +A +L++H FL+
Sbjct: 255 LEMDVEKRGSAKELIQHQFLK 275
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 145/271 (53%), Gaps = 17/271 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V + +V A K +L ++E Q+E LS +SP+I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + S KL + MEY GG+ D + G L+E+ I + R+IL+GL+YLHS
Sbjct: 81 RYFGSYLKS--TKLW--IIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHS 134
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
R +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
F +DIW++G T IE+A G P + PM VL+ I + P + SK +F+ CL
Sbjct: 195 FKADIWSLGITAIELAKGEPP-NSDLHPMRVLFLIPKNSP-PTLEGQHSKPFKEFVEACL 252
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQE 264
+DP+ R A +LLKH F+ + T + E
Sbjct: 253 NKDPRFRPTAKELLKHKFITRYTKKTSFLTE 283
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 18/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ---REQKFLSSLNSPHIVGYKGCDV 65
+G+GS +V A +G + A K ++P LQ +E + +SPH+V Y G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
+ D + MEY G+++D I L E I + + L+GLEYLH R +H D
Sbjct: 95 KNTD----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD 150
Query: 126 IKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQGFASDIWA 180
IK+ NIL+ G AK+ADFG A ++ + GTP +MAPEV + +DIW+
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWS 210
Query: 181 VGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNCLRRDPK 238
+G T IEMA G P+ + PM ++ I + P P S DF+ CL + P+
Sbjct: 211 LGITAIEMAEGKPPYAD-IHPMRAIFMIP-TNPPPTFRKPELWSDNFTDFVKQCLVKSPE 268
Query: 239 ERWAASQLLKHPFL 252
+R A+QLL+HPF+
Sbjct: 269 QRATATQLLQHPFV 282
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 140/263 (53%), Gaps = 25/263 (9%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKG 62
+G+G+ V L + A K E+P+ S+ L E L +IV Y G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIK--EIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL--DESLIVSYTRQILQGLEYLHSNR 120
+ +N + +FME PGG+L+ + G L +E I YT+QIL+GL+YLH N+
Sbjct: 87 ---SFSENGFI-KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 121 VVHCDIKSRNILM-AESGA-KIADFGCAKWE------SEALQSGGTPMFMAPEVARGEHQ 172
+VH DIK N+L+ SG KI+DFG +K +E GT +MAPE+ +
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--GTLQYMAPEIIDKGPR 200
Query: 173 GF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
G+ A+DIW++GCT+IEMA+G P+ +P ++K+ + PE+P +S +A F+
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 260
Query: 231 NCLRRDPKERWAASQLLKHPFLE 253
C DP +R A+ LL FL+
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLK 283
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 17/259 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V R+ V A K +L ++E Q+E LS +SP++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + +D KL + MEY GG+ D + G LDE+ I + R+IL+GL+YLHS
Sbjct: 89 KYYGSYL--KDTKLW--IIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS 142
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+ +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+DIW++G T IE+A G P + PM VL+ I + P + SK +F+ CL
Sbjct: 203 SKADIWSLGITAIELARGEPPH-SELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEACL 260
Query: 234 RRDPKERWAASQLLKHPFL 252
++P R A +LLKH F+
Sbjct: 261 NKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 17/259 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V R+ V A K +L ++E Q+E LS +SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + +D KL + MEY GG+ D + G LDE+ I + R+IL+GL+YLHS
Sbjct: 69 KYYGSYL--KDTKLW--IIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHS 122
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+ +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+DIW++G T IE+A G P + PM VL+ I + P + SK +F+ CL
Sbjct: 183 SKADIWSLGITAIELARGEPPH-SELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEACL 240
Query: 234 RRDPKERWAASQLLKHPFL 252
++P R A +LLKH F+
Sbjct: 241 NKEPSFRPTAKELLKHKFI 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 17/259 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V R+ V A K +L ++E Q+E LS +SP++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + +D KL + MEY GG+ D + G LDE+ I + R+IL+GL+YLHS
Sbjct: 84 KYYGSYL--KDTKLW--IIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHS 137
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+ +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+DIW++G T IE+A G P + PM VL+ I + P + SK +F+ CL
Sbjct: 198 SKADIWSLGITAIELARGEPPH-SELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEACL 255
Query: 234 RRDPKERWAASQLLKHPFL 252
++P R A +LLKH F+
Sbjct: 256 NKEPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 17/259 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V R+ V A K +L ++E Q+E LS +SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + +D KL + MEY GG+ D + G LDE+ I + R+IL+GL+YLHS
Sbjct: 69 KYYGSYL--KDTKLW--IIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHS 122
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+ +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+DIW++G T IE+A G P + PM VL+ I + P + SK +F+ CL
Sbjct: 183 SKADIWSLGITAIELARGEPPH-SELHPMKVLFLIPKNNP-PTLEGNYSKPLKEFVEACL 240
Query: 234 RRDPKERWAASQLLKHPFL 252
++P R A +LLKH F+
Sbjct: 241 NKEPSFRPTAKELLKHKFI 259
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 140/263 (53%), Gaps = 25/263 (9%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKG 62
+G+G+ V L + A K E+P+ S+ L E L +IV Y G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIK--EIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL--DESLIVSYTRQILQGLEYLHSNR 120
+ +N + +FME PGG+L+ + G L +E I YT+QIL+GL+YLH N+
Sbjct: 73 ---SFSENGFI-KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 121 VVHCDIKSRNILM-AESGA-KIADFGCAKWE------SEALQSGGTPMFMAPEVARGEHQ 172
+VH DIK N+L+ SG KI+DFG +K +E GT +MAPE+ +
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--GTLQYMAPEIIDKGPR 186
Query: 173 GF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
G+ A+DIW++GCT+IEMA+G P+ +P ++K+ + PE+P +S +A F+
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 246
Query: 231 NCLRRDPKERWAASQLLKHPFLE 253
C DP +R A+ LL FL+
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 17/271 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIV 58
+T+ IG+GS V R+ V A K +L ++E Q+E LS +S ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
Y G + + +KL + MEY GG+ D + G DE I + ++IL+GL+YLHS
Sbjct: 85 KYYGSYL--KGSKLW--IIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHS 138
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+ +H DIK+ N+L++E G K+ADFG A ++ GTP +MAPEV +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+DIW++G T IE+A G P + PM VL+ I + P + +K +F+ CL
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSD-MHPMRVLFLIPKNNP-PTLVGDFTKSFKEFIDACL 256
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQE 264
+DP R A +LLKH F+ + T + E
Sbjct: 257 NKDPSFRPTAKELLKHKFIVKNSKKTSYLTE 287
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 141/270 (52%), Gaps = 21/270 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIVG 59
W +G G+ V A + +G + AAK E E L+ E + L++ + P+IV
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G D KL + +E+ PGG ++ + L E I RQ+L+ L +LHS
Sbjct: 81 LLGA--YYHDGKLW--IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 120 RVVHCDIKSRNILMA-ESGAKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQ-- 172
R++H D+K+ N+LM E ++ADFG + + LQ GTP +MAPEV E
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 173 ---GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQAND 227
+ +DIW++G T+IEMA P + +PM VL KIA S + P + P+ S + D
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPH-HELNPMRVLLKIAKS-DPPTLLTPSKWSVEFRD 254
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
FL L ++P+ R +A+QLL+HPF+ S
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFVSSITS 284
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 141/270 (52%), Gaps = 21/270 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIVG 59
W +G G+ V A + +G + AAK E E L+ E + L++ + P+IV
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G D KL + +E+ PGG ++ + L E I RQ+L+ L +LHS
Sbjct: 73 LLGA--YYHDGKLW--IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 120 RVVHCDIKSRNILMA-ESGAKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQ-- 172
R++H D+K+ N+LM E ++ADFG + + LQ GTP +MAPEV E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 173 ---GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQAND 227
+ +DIW++G T+IEMA P + +PM VL KIA S + P + P+ S + D
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPH-HELNPMRVLLKIAKS-DPPTLLTPSKWSVEFRD 246
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
FL L ++P+ R +A+QLL+HPF+ S
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFVSSITS 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 49/290 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF----LQREQKFLSSLNSPHI 57
D+ IG G++A V A + A K L K + L +E + +S + P+I
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-------HRNGGRLDESLIVSYTRQIL 110
V Y V ++ L M+ GG++ D I G LDES I + R++L
Sbjct: 76 VSYYTSFVVKDE----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 111 QGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG------------- 156
+GLEYLH N +H D+K+ NIL+ E G+ +IADFG + + L +G
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF----LATGGDITRNKVRKTFV 187
Query: 157 GTPMFMAPEV---ARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
GTP +MAPEV RG F +DIW+ G T IE+A+G AP+ + PM VL + +
Sbjct: 188 GTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATGAAPY-HKYPPMKVLM-LTLQND 243
Query: 214 LPEVPA------FLSKQANDF---LSNCLRRDPKERWAASQLLKHPFLEE 254
P + L K F +S CL++DP++R A++LL+H F ++
Sbjct: 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 49/290 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF----LQREQKFLSSLNSPHI 57
D+ IG G++A V A + A K L K + L +E + +S + P+I
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-------HRNGGRLDESLIVSYTRQIL 110
V Y V ++ L M+ GG++ D I G LDES I + R++L
Sbjct: 71 VSYYTSFVVKDE----LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 111 QGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG------------- 156
+GLEYLH N +H D+K+ NIL+ E G+ +IADFG + + L +G
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF----LATGGDITRNKVRKTFV 182
Query: 157 GTPMFMAPEV---ARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
GTP +MAPEV RG F +DIW+ G T IE+A+G AP+ + PM VL + +
Sbjct: 183 GTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATGAAPY-HKYPPMKVLM-LTLQND 238
Query: 214 LPEVPA------FLSKQANDF---LSNCLRRDPKERWAASQLLKHPFLEE 254
P + L K F +S CL++DP++R A++LL+H F ++
Sbjct: 239 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 131/255 (51%), Gaps = 18/255 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSPHIVGYKG 62
IG GS V A +R+ +V A K K + + +E +FL L P+ + Y+G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
C + L+ MEY G +D + + L E I + T LQGL YLHS+ ++
Sbjct: 83 CYLREHTAWLV----MEYCLGSA-SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPMFMAPEVA----RGEHQGFASD 177
H D+K+ NIL++E G K+ DFG A + A GTP +MAPEV G++ G D
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG-KVD 196
Query: 178 IWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
+W++G T IE+A P N + M+ LY IA + S+ +F+ +CL++ P
Sbjct: 197 VWSLGITCIELAERKPPLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 255
Query: 238 KERWAASQLLKHPFL 252
++R + LLKH F+
Sbjct: 256 QDRPTSEVLLKHRFV 270
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIVG 59
W +G G+ V A + + + AAK + E L+ E L+S + P+IV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV- 97
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
K D +N L + +E+ GG ++ + L ES I +Q L L YLH N
Sbjct: 98 -KLLDAFYYENNLW--ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEV-----ARG 169
+++H D+K+ NIL G K+ADFG + + +Q GTP +MAPEV ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQAND 227
+ +D+W++G T+IEMA P + +PM VL KIA S E P + P+ S D
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKD 272
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
FL CL ++ RW SQLL+HPF+
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIVG 59
W +G G+ V A + + + AAK + E L+ E L+S + P+IV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV- 97
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
K D +N L + +E+ GG ++ + L ES I +Q L L YLH N
Sbjct: 98 -KLLDAFYYENNLW--ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEV-----ARG 169
+++H D+K+ NIL G K+ADFG + + +Q GTP +MAPEV ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQAND 227
+ +D+W++G T+IEMA P + +PM VL KIA S E P + P+ S D
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKD 272
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
FL CL ++ RW SQLL+HPF+
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIVG 59
W +G G+ V A + + + AAK + E L+ E L+S + P+IV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV- 97
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
K D +N L + +E+ GG ++ + L ES I +Q L L YLH N
Sbjct: 98 -KLLDAFYYENNLW--ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEV-----ARG 169
+++H D+K+ NIL G K+ADFG + + +Q GTP +MAPEV ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQAND 227
+ +D+W++G T+IEMA P + +PM VL KIA S E P + P+ S D
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKD 272
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
FL CL ++ RW SQLL+HPF+
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 131/255 (51%), Gaps = 18/255 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSPHIVGYKG 62
IG GS V A +R+ +V A K K + + +E +FL L P+ + Y+G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
C + L+ MEY G +D + + L E I + T LQGL YLHS+ ++
Sbjct: 122 CYLREHTAWLV----MEYCLGSA-SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPMFMAPEVA----RGEHQGFASD 177
H D+K+ NIL++E G K+ DFG A + A GTP +MAPEV G++ G D
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG-KVD 235
Query: 178 IWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
+W++G T IE+A P N + M+ LY IA + S+ +F+ +CL++ P
Sbjct: 236 VWSLGITCIELAERKPPLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 294
Query: 238 KERWAASQLLKHPFL 252
++R + LLKH F+
Sbjct: 295 QDRPTSEVLLKHRFV 309
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 138/263 (52%), Gaps = 20/263 (7%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 70 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + + A + GT +M+PE +G H
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAY--SRELPEVP-AFLSKQANDFLS 230
SDIW++G +++EMA G P P PM + + Y + P++P A S + DF++
Sbjct: 185 VQSDIWSMGLSLVEMAVGRYPRP----PMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVN 240
Query: 231 NCLRRDPKERWAASQLLKHPFLE 253
CL ++P ER QL+ H F++
Sbjct: 241 KCLIKNPAERADLKQLMVHAFIK 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 67 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 174 FASDIWAVGCTVIEMASGGAPWP------NAADPMTVLYKIAY--SRELPEVPA-FLSKQ 224
SDIW++G +++EMA G P P ++ PM + + Y + P++P+ S +
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLE 241
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
DF++ CL ++P ER QL+ H F++
Sbjct: 242 FQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 139/263 (52%), Gaps = 16/263 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 86 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 200
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAY--SRELPEVPA-FLSKQANDFLS 230
SDIW++G +++EMA G P + + M + + Y + P++P+ S + DF++
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 260
Query: 231 NCLRRDPKERWAASQLLKHPFLE 253
CL ++P ER QL+ H F++
Sbjct: 261 KCLIKNPAERADLKQLMVHAFIK 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 81
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 257
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 258 LVRDPAQRATAAELLKHPFL 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 86
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 262
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 263 LVRDPAQRATAAELLKHPFL 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 77
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 253
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 254 LVRDPAQRATAAELLKHPFL 273
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 88
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 264
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 265 LVRDPAQRATAAELLKHPFL 284
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 129/257 (50%), Gaps = 21/257 (8%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
G+ A + L + V KS E + E E L+S + P+IV K D
Sbjct: 23 FGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIV--KLLDAFYY 78
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
+N L + +E+ GG ++ + L ES I +Q L L YLH N+++H D+K+
Sbjct: 79 ENNLW--ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 129 RNILMAESG-AKIADFGC-AKWESEALQSG----GTPMFMAPEV-----ARGEHQGFASD 177
NIL G K+ADFG AK +Q GTP +MAPEV ++ + +D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 178 IWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV--PAFLSKQANDFLSNCLRR 235
+W++G T+IEMA P + +PM VL KIA S E P + P+ S DFL CL +
Sbjct: 197 VWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKS-EPPTLAQPSRWSSNFKDFLKKCLEK 254
Query: 236 DPKERWAASQLLKHPFL 252
+ RW SQLL+HPF+
Sbjct: 255 NVDARWTTSQLLQHPFV 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 131
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 307
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 308 LVRDPAQRATAAELLKHPFL 327
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG+GS+ V +AT SG + A K +L K + +RE F N I+ D E
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLF----NEVVIMR----DYQHE 208
Query: 69 DNKLMYN---------LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+ MYN + ME+ GG L D + R++E I + +LQ L LH+
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGF 174
V+H DIKS +IL+ G K++DFG CA+ E + GTP +MAPE+ G
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNC 232
DIW++G VIEM G P+ N +P K+ P + +S FL
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 384
Query: 233 LRRDPKERWAASQLLKHPFL 252
L RDP +R A++LLKHPFL
Sbjct: 385 LVRDPAQRATAAELLKHPFL 404
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 126/258 (48%), Gaps = 26/258 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS---EFLQREQKFLSSLNSPHIV-GYKGCD 64
IG+GS+ V LA SG A K +L K E L E + ++V YK
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHC 124
V E + ME+ GG L D + + RL+E I + +LQ L YLH+ V+H
Sbjct: 113 VGEE-----LWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 125 DIKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGFASDIW 179
DIKS +IL+ G K++DFG CA+ + + GTP +MAPEV DIW
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF-----LSKQANDFLSNCLR 234
++G VIEM G P+ + P+ + ++ R+ P P +S DFL L
Sbjct: 226 SLGIMVIEMVDGEPPY-FSDSPVQAMKRL---RDSPP-PKLKNSHKVSPVLRDFLERMLV 280
Query: 235 RDPKERWAASQLLKHPFL 252
RDP+ER A +LL HPFL
Sbjct: 281 RDPQERATAQELLDHPFL 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R TIG GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G K+ADFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R TIG GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G K+ADFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R TIG GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G K+ADFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQ---KFLSSLNSP 55
D+ G+ +G+GS A V A S+ +G A K + + K+ +QR Q K L P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
I+ ED+ +Y L +E G +N + E+ + QI+ G+ Y
Sbjct: 72 SILELYN---YFEDSNYVY-LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCA---KWESEALQS-GGTPMFMAPEVARGE 170
LHS+ ++H D+ N+L+ + KIADFG A K E + GTP +++PE+A
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 171 HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
G SD+W++GC + G P+ T L K+ + E+P+FLS +A D +
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNKVVLADY--EMPSFLSIEAKDLIH 244
Query: 231 NCLRRDPKERWAASQLLKHPFL 252
LRR+P +R + S +L HPF+
Sbjct: 245 QLLRRNPADRLSLSSVLDHPFM 266
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 18/255 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS---EFLQREQKFLSSLNSPHIVGYKGCDV 65
IG+GS+ V +AT +G A K +L K E L E + + ++V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
++ + ME+ GG L D + R++E I + +L+ L YLH+ V+H D
Sbjct: 113 VGDE----LWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 126 IKSRNILMAESG-AKIADFG-CAKWESEALQSG---GTPMFMAPEVARGEHQGFASDIWA 180
IKS +IL+ G K++DFG CA+ E + GTP +MAPEV G DIW+
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 181 VGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDPK 238
+G VIEM G P+ N P+ + +I S P V +S FL L R+P
Sbjct: 227 LGIMVIEMIDGEPPYFNEP-PLQAMRRIRDSLP-PRVKDLHKVSSVLRGFLDLMLVREPS 284
Query: 239 ERWAASQLLKHPFLE 253
+R A +LL HPFL+
Sbjct: 285 QRATAQELLGHPFLK 299
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 23/266 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPK--------SEFLQREQKFLSSLNSPHIVG 59
IG+G+ + V + +G FA K ++ K +E L+RE L PHIV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV- 89
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---GGRLDESLIVSYTRQILQGLEYL 116
+ + S D ++Y +F E+ G L EI + G E++ Y RQIL+ L Y
Sbjct: 90 -ELLETYSSDG-MLYMVF-EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 117 HSNRVVHCDIKSRNILMA----ESGAKIADFGCAKWESEA-LQSG---GTPMFMAPEVAR 168
H N ++H D+K N+L+A + K+ DFG A E+ L +G GTP FMAPEV +
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
E G D+W G + + SG P+ + + + P + +S+ A D
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDL 266
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
+ L DP ER + L HP+L+E
Sbjct: 267 VRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNS 54
+ RG +G+G A T + + +VFA K +PKS L+ QK SL++
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PH+VG+ G ED+ +Y + +E +L E+H+ + E + RQ +QG++
Sbjct: 86 PHVVGFHG---FFEDDDFVY-VVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARG 169
YLH+NRV+H D+K N+ + + KI DFG A K E + + GTP ++APEV
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQAND 227
+ F DIW++GC + + G P+ + T + K YS VP ++ A+
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-----VPRHINPVASA 255
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
+ L DP R + ++LL F
Sbjct: 256 LIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 27/265 (10%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNS 54
+ RG +G+G A T + + +VFA K +PKS L+ QK SL++
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PH+VG+ G ED+ +Y + +E +L E+H+ + E + RQ +QG++
Sbjct: 102 PHVVGFHGF---FEDDDFVY-VVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFGCA---KWESEALQS-GGTPMFMAPEVARG 169
YLH+NRV+H D+K N+ + + KI DFG A +++ E ++ GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQAND 227
+ F DIW++GC + + G P+ + T + K YS VP ++ A+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-----VPRHINPVASA 271
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
+ L DP R + ++LL F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 104 LTK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 33/270 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP--KSEFLQREQKFLSSL-NSPHIVGYKGCDV 65
+G G+ V +++G + A K ++ + E +++E L + +I Y G +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 66 TSE----DNKLMYNLFMEYAPGGTLNDEI-HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
D++L L ME+ G++ D I + G L E I R+IL+GL +LH ++
Sbjct: 92 KKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 121 VVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQ--- 172
V+H DIK +N+L+ E+ K+ DFG + + GTP +MAPEV +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 173 --GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPA------FLSKQ 224
F SD+W++G T IEMA G P + PM L+ I P PA SK+
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAPPLCD-MHPMRALFLI------PRNPAPRLKSKKWSKK 262
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
F+ +CL ++ +R A QL+KHPF+ +
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 104 LTK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 104 LTK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNS 54
+ RG +G+G A T + + +VFA K +PKS L+ QK SL++
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PH+VG+ G ED+ +Y + +E +L E+H+ + E + RQ +QG++
Sbjct: 102 PHVVGFHGF---FEDDDFVY-VVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARG 169
YLH+NRV+H D+K N+ + + KI DFG A K E + + GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQAND 227
+ F DIW++GC + + G P+ + T + K YS VP ++ A+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-----VPRHINPVASA 271
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
+ L DP R + ++LL F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 89 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 143
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNK 203
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 204 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 260
Query: 235 RDPKERWA 242
D +R+
Sbjct: 261 VDLTKRFG 268
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEYAPGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G K+ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 27/265 (10%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNS 54
+ RG +G+G A T + + +VFA K +PKS L+ QK SL++
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKV--VPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PH+VG+ G ED+ +Y + +E +L E+H+ + E + RQ +QG++
Sbjct: 102 PHVVGFHG---FFEDDDFVY-VVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARG 169
YLH+NRV+H D+K N+ + + KI DFG A K E + + GTP ++APEV
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQAND 227
+ F DIW++GC + + G P+ + T + K YS VP ++ A+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-----VPRHINPVASA 271
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
+ L DP R + ++LL F
Sbjct: 272 LIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ FA K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ FA K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ FA K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEYSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 16/256 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK--STELPKSEF-LQREQKFLSSLNSPHIVGYKGCDV 65
+G G+ V +G VF AK +T P ++ ++ E ++ L+ P ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD--- 115
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
+ ++K L +E+ GG L D I ++ E+ +++Y RQ +GL+++H + +VH D
Sbjct: 116 -AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174
Query: 126 IKSRNIL---MAESGAKIADFGCA-KWESEAL--QSGGTPMFMAPEVARGEHQGFASDIW 179
IK NI+ S KI DFG A K + + + T F APE+ E GF +D+W
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMW 234
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDP 237
A+G + SG +P+ D T+ E E AF +S +A DF+ N L+++P
Sbjct: 235 AIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE-DAFSSVSPEAKDFIKNLLQKEP 293
Query: 238 KERWAASQLLKHPFLE 253
++R L+HP+L+
Sbjct: 294 RKRLTVHDALEHPWLK 309
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ ++N P
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + +EYAPGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVLEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G K+ADFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 17/260 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 70 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 124
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFG--CAKWESEALQSGGTPMFMAPEVARGEHQ 172
HS RV+H DIK N+L+ +G KIADFG C S GT ++ PE+ G
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
D+W++G E G P+ A+ YK SR P F+++ A D +S
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLISRL 241
Query: 233 LRRDPKERWAASQLLKHPFL 252
L+ +P +R ++L+HP++
Sbjct: 242 LKHNPSQRPMLREVLEHPWI 261
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 96 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 150
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 267
Query: 235 RDPKERWA 242
D +R+
Sbjct: 268 VDLTKRFG 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 129 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 243
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 303
Query: 201 -----PMTVLYKIAY--SRELPEVP-AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P A S + DF++ CL ++P ER QL+ H F+
Sbjct: 304 MDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 363
Query: 253 E 253
+
Sbjct: 364 K 364
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 96 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 150
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 211 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 267
Query: 235 RDPKERWA 242
D +R+
Sbjct: 268 VDLTKRFG 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V C +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 98 FFVKLYFC--FQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 152
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 269
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 270 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L +G+ +A K +L + E E++ L ++N P
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY PGG + + R G R E Y QI+ EYL
Sbjct: 124 LVK---LEFSFKDNSNLY-MVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 178
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 295
Query: 235 RDPKERWA 242
D +R+
Sbjct: 296 VDLTKRFG 303
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 94 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 208
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268
Query: 201 -----PMTVLYKIAY--SRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P+ S + DF++ CL ++P ER QL+ H F+
Sbjct: 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
Query: 253 E 253
+
Sbjct: 329 K 329
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 90 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 144
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ E G ++ DFG AK + GTP ++APE+ +
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 205 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 261
Query: 235 RDPKERWA 242
D +R+
Sbjct: 262 VDLTKRFG 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 75 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 129
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 246
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 247 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 67 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 201 -----PMTVLYKIAY--SRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P+ S + DF++ CL ++P ER QL+ H F+
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 253 E 253
+
Sbjct: 302 K 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 67 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 201 -----PMTVLYKIAY--SRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P+ S + DF++ CL ++P ER QL+ H F+
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 253 E 253
+
Sbjct: 302 K 302
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 86 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 140
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 254
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 90 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 144
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 261
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 67 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 201 -----PMTVLYKIAY--SRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P+ S + DF++ CL ++P ER QL+ H F+
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 253 E 253
+
Sbjct: 302 K 302
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 90 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 144
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 261
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ + +G G+ V + SG V A K L ++ RE + L NSP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + GR+ E ++ + +++GL YL
Sbjct: 67 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +M+PE +G H
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 174 FASDIWAVGCTVIEMASGGAPWP-----------------NAAD---------------- 200
SDIW++G +++EMA G P P +AA+
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 201 -----PMTVLYKIAY--SRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
PM + + Y + P++P+ S + DF++ CL ++P ER QL+ H F+
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
Query: 253 E 253
+
Sbjct: 302 K 302
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 68 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 122
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 239
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 69 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 123
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 240
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 70 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 124
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 241
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 242 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGCLLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 71 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 125
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 239
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 70 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 124
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 238
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 70 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 124
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 238
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L + +G+ +A K +L + E E++ L ++N P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 96 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 150
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ A + + KI + PA +A D
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEY--DFPAAFFPKARDL 267
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 268 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 71 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 125
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 242
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 243 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 95 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 149
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 263
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 95 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 149
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 263
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 74 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 128
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 242
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 74 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 128
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 242
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A +P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADEPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 91 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 145
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 262
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 124 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 178
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-GTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK A + GTP ++APE+ +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 295
Query: 235 RDPKERWA 242
D +R+
Sbjct: 296 VDLTKRFG 303
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 91 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 145
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 262
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 74 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 128
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 242
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 68 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 122
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 236
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 237 SRLLKHNPSQRPMLREVLEHPWI 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 91 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 145
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 262
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 94 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 148
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 265
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 93 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 147
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 264
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 98 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 152
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 213 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 269
Query: 235 RDPKERWA 242
D +R+
Sbjct: 270 VDLTKRFG 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +TV LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 94 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 148
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 265
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 22/283 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHI 57
+ R IG+GS L S G + K + + E +RE L+++ P+I
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL-DESLIVSYTRQILQGLEYL 116
V Y+ + E+N +Y + M+Y GG L I+ G L E I+ + QI L+++
Sbjct: 86 VQYRE---SFEENGSLY-IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEH 171
H +++H DIKS+NI + + G ++ DFG A+ + ++ GTP +++PE+ +
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
SDIWA+GC + E+ + + + VL I+ S P V S +S
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FPPVSLHYSYDLRSLVSQ 259
Query: 232 CLRRDPKERWAASQLLKHPF----LEEFCSCTKQIQESNCSPT 270
+R+P++R + + +L+ F +E+F S + I E C T
Sbjct: 260 LFKRNPRDRPSVNSILEKGFIAKRIEKFLS-PQLIAEEFCLKT 301
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 13 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 73 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 127
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 241
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 242 SRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 16/277 (5%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK---SEFLQREQKFLSSLNSPHIVGYKGCDV 65
+G G+ V T +G+ FAAK P E +++E + +S L P +V D
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH--DA 222
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
+DN+++ + E+ GG L +++ ++ E V Y RQ+ +GL ++H N VH D
Sbjct: 223 FEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280
Query: 126 IKSRNILMAESGA---KIADFGCAKW---ESEALQSGGTPMFMAPEVARGEHQGFASDIW 179
+K NI+ + K+ DFG + + GT F APEVA G+ G+ +D+W
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW 340
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDP 237
+VG + SG +P+ D T+ + + + AF +S+ DF+ L DP
Sbjct: 341 SVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS-AFSGISEDGKDFIRKLLLADP 399
Query: 238 KERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILD 274
R Q L+HP+L + + Q + T I D
Sbjct: 400 NTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRD 436
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 16/277 (5%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK---SEFLQREQKFLSSLNSPHIVGYKGCDV 65
+G G+ V T +G+ FAAK P E +++E + +S L P +V D
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH--DA 116
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
+DN+++ + E+ GG L +++ ++ E V Y RQ+ +GL ++H N VH D
Sbjct: 117 FEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 174
Query: 126 IKSRNILMAESGA---KIADFGCAKW---ESEALQSGGTPMFMAPEVARGEHQGFASDIW 179
+K NI+ + K+ DFG + + GT F APEVA G+ G+ +D+W
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW 234
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDP 237
+VG + SG +P+ D T+ + + + AF +S+ DF+ L DP
Sbjct: 235 SVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS-AFSGISEDGKDFIRKLLLADP 293
Query: 238 KERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILD 274
R Q L+HP+L + + Q + T I D
Sbjct: 294 NTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRD 330
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 104 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 158
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 219 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 275
Query: 235 RDPKERWA 242
D +R+
Sbjct: 276 VDLTKRFG 283
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 23/264 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K T+L K+ L+RE + S L P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + R DE +Y ++ L Y
Sbjct: 73 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-RFDEQRTATYITELANALSY 127
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A Y+ SR P F+++ A D +
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQETYR-RISRVEFTFPDFVTEGARDLI 241
Query: 230 SNCLRRDPKERWAASQLLKHPFLE 253
S L+ + +R +++L+HP+++
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 23/264 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K T+L K+ L+RE + S L P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + R DE +Y ++ L Y
Sbjct: 73 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-RFDEQRTATYITELANALSY 127
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFG---WSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A Y+ SR P F+++ A D +
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQETYR-RISRVEFTFPDFVTEGARDLI 241
Query: 230 SNCLRRDPKERWAASQLLKHPFLE 253
S L+ + +R +++L+HP+++
Sbjct: 242 SRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 124 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLTFEYL 178
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 239 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 295
Query: 235 RDPKERWA 242
D +R+
Sbjct: 296 VDLTKRFG 303
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFAEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP G + E+ + + DE +Y ++ L Y
Sbjct: 74 NILRLYGY---FHDATRVY-LILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSY 128
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQS-----GGTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 242
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP G + E+ + + DE +Y ++ L Y
Sbjct: 74 NILRLYG---YFHDATRVY-LILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSY 128
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 242
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 71 NILRLYG---YFHDATRVY-LILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSY 125
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIA+FG W A S GT ++ PE+ G
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 239
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPK--------SEFLQREQKFLSSLNSPHIVG 59
IG+G + V + +G FA K ++ K +E L+RE L PHIV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV- 89
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---GGRLDESLIVSYTRQILQGLEYL 116
+ + S D ++Y +F E+ G L EI + G E++ Y RQIL+ L Y
Sbjct: 90 -ELLETYSSDG-MLYMVF-EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 117 HSNRVVHCDIKSRNILMA----ESGAKIADFGCAKWESEA-LQSG---GTPMFMAPEVAR 168
H N ++H D+K +L+A + K+ FG A E+ L +G GTP FMAPEV +
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
E G D+W G + + SG P+ + + + P + +S+ A D
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDL 266
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
+ L DP ER + L HP+L+E
Sbjct: 267 VRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + +MA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYQMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+++ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA S + A K +L K+ L+RE + S L P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D+ +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 69 NILRLYGY---FHDSTRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS +V+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYK-RISRVEFTFPDFVTEGARDLI 237
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPK--------SEFLQREQKFLSSLNSPHIVG 59
IG+G + V + +G FA K ++ K +E L+RE L PHIV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV- 91
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---GGRLDESLIVSYTRQILQGLEYL 116
+ + S D ++Y +F E+ G L EI + G E++ Y RQIL+ L Y
Sbjct: 92 -ELLETYSSDG-MLYMVF-EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 117 HSNRVVHCDIKSRNILMA----ESGAKIADFGCAKWESEA-LQSG---GTPMFMAPEVAR 168
H N ++H D+K +L+A + K+ FG A E+ L +G GTP FMAPEV +
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 208
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
E G D+W G + + SG P+ + + + P + +S+ A D
Sbjct: 209 REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDL 268
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
+ L DP ER + L HP+L+E
Sbjct: 269 VRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA +S + A K +L K+ L+RE + S L P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 72 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 126
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIA+FG W A S GT ++ PE+ G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 240
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 27/271 (9%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELP------KSEFLQREQKFLSSLNSP 55
D+ G +G+GS +T LA L + +A K E K ++ RE+ +S L+ P
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
V K +D KL + L YA G L I R G DE+ YT +I+ LEY
Sbjct: 91 FFV--KLYFTFQDDEKLYFGL--SYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEY 145
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFGCAKW------ESEALQSGGTPMFMAPEVAR 168
LH ++H D+K NIL+ E +I DFG AK ++ A GT +++PE+
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
+ +SD+WA+GC + ++ +G P+ + + I + PE F K A D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPK-ARDL 262
Query: 229 LSNCLRRDPKERWAASQ------LLKHPFLE 253
+ L D +R + L HPF E
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA + + A K +L K+ L+RE + S L P
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ G D +Y L +EYAP GT+ E+ + + DE +Y ++ L Y
Sbjct: 66 NILRLYGY---FHDATRVY-LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-----GTPMFMAPEVARG 169
HS RV+H DIK N+L+ +G KIADFG W A S GT ++ PE+ G
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
D+W++G E G P+ A+ YK SR P F+++ A D +
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK-RISRVEFTFPDFVTEGARDLI 234
Query: 230 SNCLRRDPKERWAASQLLKHPFL 252
S L+ +P +R ++L+HP++
Sbjct: 235 SRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RD 236
D
Sbjct: 275 VD 276
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 37/279 (13%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPKSE----FLQREQK-FLSSLNS 54
D+ IG+GS A V L ++ ++A K EL + ++Q E+ F + N
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P +VG C T +++L + +EY GG L + R +L E Y+ +I L
Sbjct: 66 PFLVGLHSCFQT--ESRLFF--VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALN 120
Query: 115 YLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSG-------GTPMFMAPEV 166
YLH +++ D+K N+L+ +E K+ D+G K E L+ G GTP ++APE+
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEI 177
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGGAPWP-----NAADPMT--VLYKIAYSRELPEVPA 219
RGE GF+ D WA+G + EM +G +P+ + D T L+++ +++ +P
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 236
Query: 220 FLSKQANDFLSNCLRRDPKERWAA------SQLLKHPFL 252
LS +A L + L +DPKER + + HPF
Sbjct: 237 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 37/279 (13%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPKSE----FLQREQK-FLSSLNS 54
D+ IG+GS A V L ++ ++A K EL + ++Q E+ F + N
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P +VG C T +++L + +EY GG L + R +L E Y+ +I L
Sbjct: 70 PFLVGLHSCFQT--ESRLFF--VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALN 124
Query: 115 YLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSG-------GTPMFMAPEV 166
YLH +++ D+K N+L+ +E K+ D+G K E L+ G GTP ++APE+
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEI 181
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGGAPWP-----NAADPMT--VLYKIAYSRELPEVPA 219
RGE GF+ D WA+G + EM +G +P+ + D T L+++ +++ +P
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 240
Query: 220 FLSKQANDFLSNCLRRDPKERWAA------SQLLKHPFL 252
LS +A L + L +DPKER + + HPF
Sbjct: 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 37/279 (13%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPKSE----FLQREQK-FLSSLNS 54
D+ IG+GS A V L ++ ++A K EL + ++Q E+ F + N
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P +VG C T +++L + +EY GG L + R +L E Y+ +I L
Sbjct: 81 PFLVGLHSCFQT--ESRLFF--VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALN 135
Query: 115 YLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSG-------GTPMFMAPEV 166
YLH +++ D+K N+L+ +E K+ D+G K E L+ G GTP ++APE+
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEI 192
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGGAPWP-----NAADPMT--VLYKIAYSRELPEVPA 219
RGE GF+ D WA+G + EM +G +P+ + D T L+++ +++ +P
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 251
Query: 220 FLSKQANDFLSNCLRRDPKERWAA------SQLLKHPFL 252
+S +A L + L +DPKER + + HPF
Sbjct: 252 SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP ++AP + +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R T+G GS V L SG+ +A K +L + E E++ L ++N P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+V + + +DN +Y + MEY GG + + R G R E Y QI+ EYL
Sbjct: 103 LVK---LEFSFKDNSNLY-MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL 157
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAK-WESEALQSGGTPMFMAPEVARGEHQGF 174
HS +++ D+K N+L+ + G ++ DFG AK + GTP +APE+ +
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
A D WA+G + EMA+G P+ A P+ + KI + P+ S D L N L+
Sbjct: 218 AVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQ 274
Query: 235 RDPKERWA 242
D +R+
Sbjct: 275 VDLTKRFG 282
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 25/266 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPK---------SEFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + + E ++RE L +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D+ +NK L +E GG L D + L E + +QIL G+
Sbjct: 67 HPNIITLH--DIF--ENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGV 121
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCA-KWES--EALQSGGTPMFMAPE 165
YLHS R+ H D+K NI++ + K+ DFG A K E+ E GTP F+APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSK 223
+ E G +D+W++G + SG +P+ + +T + + Y + E + S+
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD-EEYFSNTSE 240
Query: 224 QANDFLSNCLRRDPKERWAASQLLKH 249
A DF+ L +DPK R +Q L+H
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 48/312 (15%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STEL-PKS-EFLQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L P S + L RE + + LN P+IV K
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV--KL 76
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E S RQI+ ++Y H R+V
Sbjct: 77 FEVI-ETEKTLY-LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 123 HCDIKSRNILM-AESGAKIADFGCAKWESEALQSG------GTPMFMAPEVARG-EHQGF 174
H D+K+ N+L+ A+ KIADFG + +E G G+P + APE+ +G ++ G
Sbjct: 134 HRDLKAENLLLDADMNIKIADFG---FSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
D+W++G + + SG P+ N + + + Y +P ++S + L
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKRF 245
Query: 233 LRRDPKERWAASQLLK-------------HPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L +P +R Q++K PF+E ++ S+ I+ G+
Sbjct: 246 LVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVE------PELDISDQKRIDIM-VGMGY 298
Query: 280 SVEETEESLGNL 291
S EE +ESL +
Sbjct: 299 SQEEIQESLSKM 310
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 37/279 (13%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPKSE----FLQREQK-FLSSLNS 54
D+ IG+GS A V L ++ ++A + EL + ++Q E+ F + N
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P +VG C T +++L + +EY GG L + R +L E Y+ +I L
Sbjct: 113 PFLVGLHSCFQT--ESRLFF--VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALN 167
Query: 115 YLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSG-------GTPMFMAPEV 166
YLH +++ D+K N+L+ +E K+ D+G K E L+ G GTP ++APE+
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIAPEI 224
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGGAPWP-----NAADPMT--VLYKIAYSRELPEVPA 219
RGE GF+ D WA+G + EM +G +P+ + D T L+++ +++ +P
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 283
Query: 220 FLSKQANDFLSNCLRRDPKERWAA------SQLLKHPFL 252
LS +A L + L +DPKER + + HPF
Sbjct: 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 152/312 (48%), Gaps = 48/312 (15%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STEL-PKS-EFLQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L P S + L RE + + LN P+IV K
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV--KL 79
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E S RQI+ ++Y H R+V
Sbjct: 80 FEVI-ETEKTLY-LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 123 HCDIKSRNILM-AESGAKIADFGCAKWESEALQSG------GTPMFMAPEVARG-EHQGF 174
H D+K+ N+L+ A+ KIADFG + +E G G P + APE+ +G ++ G
Sbjct: 137 HRDLKAENLLLDADMNIKIADFG---FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
D+W++G + + SG P+ N + + + Y +P ++S + L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKRF 248
Query: 233 LRRDPKERWAASQLLK-------------HPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L +P +R Q++K PF+E ++ S+ I+ G+
Sbjct: 249 LVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVE------PELDISDQKRIDIM-VGMGY 301
Query: 280 SVEETEESLGNL 291
S EE +ESL +
Sbjct: 302 SQEEIQESLSKM 313
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 19/294 (6%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL------QREQKFLSSLNSPH 56
+ G T+G G+ V + +G A K K L +RE + L PH
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
I+ K V S + + + MEY GG L D I +NG RLDE +QIL G++Y
Sbjct: 78 II--KLYQVISTPSDIF--MVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYC 132
Query: 117 HSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-H 171
H + VVH D+K N+L+ A AKIADFG + S+ S G+P + APEV G +
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
G DIW+ G + + G P+ + P T+ KI + P +L+ L +
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKICDG--IFYTPQYLNPSVISLLKH 249
Query: 232 CLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETE 285
L+ DP +R + +H + ++ ++ + S T I D+ + E+ E
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFE 303
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 25/266 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPK---------SEFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + + E ++RE L +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D+ +NK L +E GG L D + L E + +QIL G+
Sbjct: 74 HPNIITLH--DIF--ENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGV 128
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCA-KWES--EALQSGGTPMFMAPE 165
YLHS R+ H D+K NI++ + K+ DFG A K E+ E GTP F+APE
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSK 223
+ E G +D+W++G + SG +P+ + +T + + Y + E + S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD-EEYFSNTSE 247
Query: 224 QANDFLSNCLRRDPKERWAASQLLKH 249
A DF+ L +DPK R +Q L+H
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 25/266 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPK---------SEFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + + E ++RE L +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D+ +NK L +E GG L D + L E + +QIL G+
Sbjct: 88 HPNIITLH--DIF--ENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGV 142
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCA-KWES--EALQSGGTPMFMAPE 165
YLHS R+ H D+K NI++ + K+ DFG A K E+ E GTP F+APE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSK 223
+ E G +D+W++G + SG +P+ + +T + + Y + E + S+
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD-EEYFSNTSE 261
Query: 224 QANDFLSNCLRRDPKERWAASQLLKH 249
A DF+ L +DPK R +Q L+H
Sbjct: 262 LAKDFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 72 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 126
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 72 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 126
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L +E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L S L RE + + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G+P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 131/253 (51%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A + T+L S L RE + + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ + G+P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 130/253 (51%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L S L RE + + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G+P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + T D G L LI SY Q+LQGL
Sbjct: 65 PNIV--KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
Query: 262 IQ 263
++
Sbjct: 300 LR 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 27/267 (10%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + P+
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
I+ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 IITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQ---A 225
E G +D+W++G + SG +P+ T+ A S + E F S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE--EFFSQTSELA 249
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + T D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
Query: 262 IQ 263
++
Sbjct: 296 LR 297
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF--------LQREQKFLSSLN 53
D+ G +G+G V LA ++ + A K L KS+ L+RE + S L
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKV--LFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D K +Y L +E+AP G L E+ ++G R DE ++ ++ L
Sbjct: 73 HPNILRMYN---YFHDRKRIY-LMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEA-----LQSGGTPMFMAPEVA 167
Y H +V+H DIK N+LM G KIADFG W A GT ++ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G+ D+W G E G P+ + + T ++ + +L + P FLS + D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--TETHRRIVNVDL-KFPPFLSDGSKD 241
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLE 253
+S LR P +R +++HP+++
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L S L RE + + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 23/264 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF---LQREQKFLSSLNSP 55
D+ G +G+G V LA ++ + A K ++L K L+RE + S L P
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+I+ D K +Y L +E+AP G L E+ ++G R DE ++ ++ L Y
Sbjct: 76 NILRMYN---YFHDRKRIY-LMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHY 130
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEA-----LQSGGTPMFMAPEVARG 169
H +V+H DIK N+LM G KIADFG W A GT ++ PE+ G
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFL 229
+ D+W G E G P+ + + T ++ + +L + P FLS + D +
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--TETHRRIVNVDL-KFPPFLSDGSKDLI 244
Query: 230 SNCLRRDPKERWAASQLLKHPFLE 253
S LR P +R +++HP+++
Sbjct: 245 SKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 27/275 (9%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF------LQREQKFLSSLNSPHIVGYK 61
T+G G+ + V LA +G +FA K +PK ++ E L + +IV +
Sbjct: 29 TLGTGAFSEVVLAEEKATGKLFAVKC--IPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSN 119
D+ N L L M+ GG L D I G D S ++ RQ+L + YLH
Sbjct: 87 --DIYESPNHLY--LVMQLVSGGELFDRIVEKGFYTEKDASTLI---RQVLDAVYYLHRM 139
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGEHQ 172
+VH D+K N+L ES I+DFG +K E + + GTP ++APEV +
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTV--LYKIAYSRELPEVPAFLSKQANDFLS 230
A D W++G + G P+ + D + K Y + P +S A DF+
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD-ISDSAKDFIR 258
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
N + +DP +R+ Q +HP++ + K I ES
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHES 293
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A + T+L S L RE + + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G+P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 251 NPSKRGTLEQIMK 263
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL---QREQKFLS-----SLNSPHIVGY 60
+G+G A + + +VFA K +PKS L QRE+ + SL H+VG+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 83 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA---KWESEALQS-GGTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A +++ E ++ GTP ++APEV + F
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 252
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 253 QTDPTARPTINELLNDEFF 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLN 53
+ G +G G A V +G +AAK + ++ E ++RE L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+++ +NK L E GG L D + L E + +QIL G+
Sbjct: 73 HPNVITLHEV----YENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQILNGV 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-----KIADFGCAK---WESEALQSGGTPMFMAPE 165
YLHS ++ H D+K NI++ + KI DFG A + +E GTP F+APE
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVPAFLSKQ 224
+ E G +D+W++G + SG +P+ T+ A + E E + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 225 ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
A DF+ L +DPK+R L+HP+++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNSPHIVGY 60
+G+G A + + +VFA K +PKS L+ Q+ SL H+VG+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 83 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA---KWESEALQS-GGTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A +++ E ++ GTP ++APEV + F
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 252
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 253 QTDPTARPTINELLNDEFF 271
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 21/266 (7%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKS------TELPKSEFLQREQKFLSSLNSP 55
D+ T+G GS V L S +G +A K L + E E+ LS + P
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
I+ G T +D + ++ + M+Y GG L + R R + Y ++ LEY
Sbjct: 67 FIIRMWG---TFQDAQQIF-MIMDYIEGGELF-SLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-GTPMFMAPEVARGEHQG 173
LHS +++ D+K NIL+ ++G KI DFG AK+ + GTP ++APEV +
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYN 181
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+ D W+ G + EM +G P+ ++ T Y+ + EL P F ++ D LS +
Sbjct: 182 KSIDWWSFGILIYEMLAGYTPFYDSNTMKT--YEKILNAEL-RFPPFFNEDVKDLLSRLI 238
Query: 234 RRDPKERWAASQ-----LLKHPFLEE 254
RD +R Q + HP+ +E
Sbjct: 239 TRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 23/267 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLN 53
D+ +G+GS V LA ++ FA K+ L K L E++ LS
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
+ + C +++N MEY GG L I ++ + D S Y +I+ GL
Sbjct: 77 EHPFLTHMFCTFQTKENLFFV---MEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGL 132
Query: 114 EYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVAR 168
++LHS +V+ D+K NIL+ + G KIADFG K +++ + GTP ++APE+
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
G+ + D W+ G + EM G +P+ + D + + I P P +L K+A D
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDN--PFYPRWLEKEAKDL 249
Query: 229 LSNCLRRDPKERWAA-SQLLKHPFLEE 254
L R+P++R + +HP E
Sbjct: 250 LVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNSPHIVGY 60
+G+G A + + +VFA K +PKS L+ Q+ SL H+VG+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 87 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 141
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA---KWESEALQS-GGTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A +++ E ++ GTP ++APEV + F
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 256
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 257 QTDPTARPTINELLNDEFF 275
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLS 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL---QREQKFLS-----SLNSPHIVGY 60
+G+G A + + +VFA K +PKS L QRE+ + SL H+VG+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 81 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A K E + + GTP ++APEV + F
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 250
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 251 QTDPTARPTINELLNDEFF 269
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
Query: 262 IQ 263
++
Sbjct: 296 LR 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAFLSKQANDF--------------LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F DF LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 65
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 66 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 300
Query: 262 IQ 263
++
Sbjct: 301 LR 302
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAFLSKQANDF--------------LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F DF LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAFLSKQANDF--------------LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F DF LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
Query: 262 IQ 263
++
Sbjct: 296 LR 297
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
Query: 262 IQ 263
++
Sbjct: 296 LR 297
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 68
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 69 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 124
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 303
Query: 262 IQ 263
++
Sbjct: 304 LR 305
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 65
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 66 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 300
Query: 262 IQ 263
++
Sbjct: 301 LR 302
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 23/267 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLN 53
D+ +G+GS V LA ++ FA K+ L K L E++ LS
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
+ + C +++N MEY GG L I ++ + D S Y +I+ GL
Sbjct: 76 EHPFLTHMFCTFQTKENLFFV---MEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGL 131
Query: 114 EYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVAR 168
++LHS +V+ D+K NIL+ + G KIADFG K +++ GTP ++APE+
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
G+ + D W+ G + EM G +P+ + D + + I P P +L K+A D
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDN--PFYPRWLEKEAKDL 248
Query: 229 LSNCLRRDPKERWAA-SQLLKHPFLEE 254
L R+P++R + +HP E
Sbjct: 249 LVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNSPHIVGY 60
+G+G A + + +VFA K +PKS L+ Q+ SL H+VG+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 105 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 159
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A K E + + GTP ++APEV + F
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 274
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 275 QTDPTARPTINELLNDEFF 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 62
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 63 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
Query: 262 IQ 263
++
Sbjct: 298 LR 299
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 62
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 63 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
Query: 262 IQ 263
++
Sbjct: 298 LR 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 65 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
Query: 262 IQ 263
++
Sbjct: 300 LR 301
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 63
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 64 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
Query: 262 IQ 263
++
Sbjct: 299 LR 300
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 63
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 64 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
Query: 262 IQ 263
++
Sbjct: 299 LR 300
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL------QREQKFLSSLNSPH 56
+ G T+G G+ V + +G A K K L +RE + L PH
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
I+ T D + + MEY GG L D I ++G R++E +QIL ++Y
Sbjct: 73 IIKLYQVISTPTD----FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYC 127
Query: 117 HSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-H 171
H + VVH D+K N+L+ A AKIADFG + S+ S G+P + APEV G +
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
G DIW+ G + + G P+ + P T+ KI + +P +L++ L +
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVP-TLFKKIRGG--VFYIPEYLNRSVATLLMH 244
Query: 232 CLRRDPKERWAASQLLKHPFLEE 254
L+ DP +R + +H + ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 65 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
Query: 262 IQ 263
++
Sbjct: 300 LR 301
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 62
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 63 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP---KSEFLQREQKFL---SSLNSPHIVGYKG 62
+G G +TV LA A K+ +P K E L+R ++ + S L+ +IV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM-- 76
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
DV ED+ Y L MEY G TL++ I +G L +++T QIL G+++ H R+V
Sbjct: 77 IDVDEEDD--CYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 123 HCDIKSRNILM-AESGAKIADFGCAKWESEA--LQSG---GTPMFMAPEVARGEHQGFAS 176
H DIK +NIL+ + KI DFG AK SE Q+ GT + +PE A+GE +
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR- 235
DI+++G + EM G P+ N +++ K +P V + K LSN + R
Sbjct: 194 DIYSIGIVLYEMLVGEPPF-NGETAVSIAIK-HIQDSVPNVTTDVRKDIPQSLSNVILRA 251
Query: 236 ---DPKERWAASQLLK 248
D R+ Q +K
Sbjct: 252 TEKDKANRYKTIQEMK 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFL------QREQKFLSSLNSPH 56
+ G T+G G+ V + +G A K K L +RE + L PH
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
I+ T D + + MEY GG L D I ++G R++E +QIL ++Y
Sbjct: 73 IIKLYQVISTPTD----FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYC 127
Query: 117 HSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-H 171
H + VVH D+K N+L+ A AKIADFG + S+ S G+P + APEV G +
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
G DIW+ G + + G P+ + P T+ KI + +P +L++ L +
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVP-TLFKKIRGG--VFYIPEYLNRSVATLLMH 244
Query: 232 CLRRDPKERWAASQLLKHPFLEE 254
L+ DP +R + +H + ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
P+F L + LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 76 LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAE 135
L MEY GG L D I L E + + +QI +G+ ++H ++H D+K NIL
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN 222
Query: 136 SGA---KIADFGCAKWES--EALQSG-GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMA 189
A KI DFG A+ E L+ GTP F+APEV + F +D+W+VG +
Sbjct: 223 RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
Query: 190 SGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDPKERWAASQLL 247
SG +P+ D T L I R E F +S++A +F+S L ++ R +AS+ L
Sbjct: 283 SGLSPFLGDNDAET-LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL 341
Query: 248 KHPFLEE 254
KHP+L +
Sbjct: 342 KHPWLSD 348
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 27/259 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNSPHIVGY 60
+G+G A + + +VFA K +PKS L+ Q+ SL H+VG+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKI--VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
G EDN ++ + +E +L E+H+ L E Y RQI+ G +YLH NR
Sbjct: 107 HG---FFEDNDFVF-VVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCA-KWESEALQSG---GTPMFMAPEVARGEHQGFA 175
V+H D+K N+ + E KI DFG A K E + + GTP ++APEV + F
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLY--KIAYSRELPEVPAFLSKQANDFLSNCL 233
D+W++GC + + G P+ + T L K YS +P ++ A + L
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-----IPKHINPVAASLIQKML 276
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DP R ++LL F
Sbjct: 277 QTDPTARPTINELLNDEFF 295
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 25/259 (9%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK-------STELPKSEFLQREQKFLSSLNSPHIVGY 60
TIG G A V LA + +G++ A K ++LP+ ++ E + L +L HI
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR---IKTEIEALKNLRHQHIC-- 71
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ V NK+ + +EY PGG L D I + RL E RQI+ + Y+HS
Sbjct: 72 QLYHVLETANKIF--MVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 121 VVHCDIKSRNILMAE-SGAKIADFG-CAKWESEA---LQSG-GTPMFMAPEVARGE-HQG 173
H D+K N+L E K+ DFG CAK + LQ+ G+ + APE+ +G+ + G
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
+D+W++G + + G P+ + D + LYK R +VP +LS + L L
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDD--DNVMALYK-KIMRGKYDVPKWLSPSSILLLQQML 245
Query: 234 RRDPKERWAASQLLKHPFL 252
+ DPK+R + LL HP++
Sbjct: 246 QVDPKKRISMKNLLNHPWI 264
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 68
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 69 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 124
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 303
Query: 262 IQ 263
++
Sbjct: 304 LR 305
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 62
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 63 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
Query: 262 IQ 263
++
Sbjct: 298 LR 299
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 63
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 64 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
Query: 262 IQ 263
++
Sbjct: 299 LR 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 63
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG-GRLDESLIVSYTRQILQGL 113
P+IV K DV +NKL L E+ L D + + + LI SY Q+LQGL
Sbjct: 64 PNIV--KLLDVIHTENKLY--LVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVAR 168
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 169 G-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE----------- 216
G ++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 217 --VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTK 260
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
Query: 261 QIQ 263
++
Sbjct: 298 HLR 300
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 25/271 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSL-----RSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHI 57
+ R +G G+ V L R+ + S + L E L L+ P+I
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-HR-NGGRLDESLIVSYTRQILQGLEY 115
+ K D ++K Y L ME GG L DEI HR +D ++I+ +Q+L G+ Y
Sbjct: 99 M--KLYDFF--EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII---KQVLSGVTY 151
Query: 116 LHSNRVVHCDIKSRNILM----AESGAKIADFGC-AKWESEA--LQSGGTPMFMAPEVAR 168
LH + +VH D+K N+L+ ++ KI DFG A +E++ + GT ++APEV R
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQAN 226
++ D+W++G + + +G P+ D +L K+ + + P + +S+ A
Sbjct: 212 KKYDE-KCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
D + L+ D + R +A Q L+HP+++E CS
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG-GRLDESLIVSYTRQILQGL 113
P+IV K DV +NKL L E+ L D + + + LI SY Q+LQGL
Sbjct: 65 PNIV--KLLDVIHTENKLY--LVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 114 EYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVAR 168
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 169 G-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE----------- 216
G ++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 217 --VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTK 260
P+F L + LS L DP +R +A L HPF ++
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
Query: 261 QIQ 263
++
Sbjct: 299 HLR 301
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 82 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 200 VASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 76 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 194 VASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 81 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 77 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 195 VASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 78 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
QRE + L +L+S IV Y+G V+ + L MEY P G L D + R+ RLD S
Sbjct: 55 FQREIQILKALHSDFIVKYRG--VSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASR 112
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW------ESEALQ 154
++ Y+ QI +G+EYL S R VH D+ +RNIL+ +E+ KIADFG AK +
Sbjct: 113 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVRE 172
Query: 155 SGGTPMF-MAPEVARGEHQGFASDIWAVGCTVIEM 188
G +P+F APE SD+W+ G + E+
Sbjct: 173 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 96 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 78 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 83 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 201 VASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 84 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 202 VASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 109 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 227 VASDVWSFGVVLYELFT 243
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L S L RE + + LN P+IV K
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV--KL 71
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G + E + RQI+ ++Y H +V
Sbjct: 72 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHGW-MKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G+P + APE+ +G ++ G D
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P ++S + L L
Sbjct: 189 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYMSTDCENLLKKFLIL 243
Query: 236 DPKERWAASQLLK 248
+P +R Q++K
Sbjct: 244 NPSKRGTLEQIMK 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 96 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 85 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 203 VASDVWSFGVVLYELFT 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A K + K +F ++ E +
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETEIEI 68
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 69 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 78 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
QRE + L +L+S IV Y+G V+ + L MEY P G L D + R+ RLD S
Sbjct: 58 FQREIQILKALHSDFIVKYRG--VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 115
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW------ESEALQ 154
++ Y+ QI +G+EYL S R VH D+ +RNIL+ +E+ KIADFG AK +
Sbjct: 116 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 175
Query: 155 SGGTPMF-MAPEVARGEHQGFASDIWAVGCTVIEM 188
G +P+F APE SD+W+ G + E+
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A K + K +F ++ E +
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETEIEI 67
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 68 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 121
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A K + K +F ++ E +
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETEIEI 68
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 69 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 27/266 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF--------LQREQKFLSSLN 53
D+ +G+G V LA ++ + A K L KS+ L+RE + S L
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKV--LFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D K +Y L +E+AP G L E+ ++G R DE ++ ++ L
Sbjct: 73 HPNILRMYN---YFHDRKRIY-LMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADAL 127
Query: 114 EYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEA-----LQSGGTPMFMAPEVA 167
Y H +V+H DIK N+LM G KIADFG W A GT ++ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFG---WSVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G+ D+W G E G P+ + + T ++ + +L + P FLS + D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--TETHRRIVNVDL-KFPPFLSDGSKD 241
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLE 253
+S LR P +R +++HP+++
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A K + K +F ++ E +
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETEIEI 68
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 69 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 122
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
QRE + L +L+S IV Y+G V+ + L MEY P G L D + R+ RLD S
Sbjct: 71 FQREIQILKALHSDFIVKYRG--VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 128
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW------ESEALQ 154
++ Y+ QI +G+EYL S R VH D+ +RNIL+ +E+ KIADFG AK +
Sbjct: 129 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 155 SGGTPMF-MAPEVARGEHQGFASDIWAVGCTVIEM 188
G +P+F APE SD+W+ G + E+
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 62
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL D G L LI SY Q+LQGL
Sbjct: 63 PNIV--KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
Query: 262 IQ 263
++
Sbjct: 298 LR 299
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL D G L LI SY Q+LQGL
Sbjct: 65 PNIV--KLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 217 -VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F L + LS L DP +R +A L HPF ++
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
Query: 262 IQ 263
++
Sbjct: 300 LR 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
QRE + L +L+S IV Y+G V+ + L MEY P G L D + R+ RLD S
Sbjct: 59 FQREIQILKALHSDFIVKYRG--VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 116
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW------ESEALQ 154
++ Y+ QI +G+EYL S R VH D+ +RNIL+ +E+ KIADFG AK +
Sbjct: 117 LLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 155 SGGTPMF-MAPEVARGEHQGFASDIWAVGCTVIEM 188
G +P+F APE SD+W+ G + E+
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A L P + RE L LN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELNH 61
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 62 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 217 -VPAFLSKQANDF--------------LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F DF LS L DP +R +A L HPF ++
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
Query: 262 IQ 263
++
Sbjct: 297 LR 298
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 47/302 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A L P + RE L LN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELNH 60
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+IV K DV +NKL + D G L LI SY Q+LQGL
Sbjct: 61 PNIV--KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 116
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+ G
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 170 -EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE------------ 216
++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 217 -VPAFLSKQANDF--------------LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ 261
P+F DF LS L DP +R +A L HPF ++
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
Query: 262 IQ 263
++
Sbjct: 296 LR 297
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + + R+D ++ YT QI +G+EYL + R
Sbjct: 81 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 27/262 (10%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELP---KSEFLQREQKFLSSLNSPHIVGYKGCD 64
+G G+ + V L +G +FA K + + L+ E L + +IV
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV------ 69
Query: 65 VTSED---NKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSN 119
T ED + Y L M+ GG L D I G D SL++ +Q+L ++YLH N
Sbjct: 70 -TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI---QQVLSAVKYLHEN 125
Query: 120 RVVHCDIKSRNILMA----ESGAKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
+VH D+K N+L S I DFG +K E + S GTP ++APEV +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSN 231
A D W++G + G P+ + + KI E P + +S+ A DF+ +
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICH 244
Query: 232 CLRRDPKERWAASQLLKHPFLE 253
L +DP ER+ + L HP+++
Sbjct: 245 LLEKDPNERYTCEKALSHPWID 266
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A K + K +F ++ E +
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKI--ISKRKFAIGSAREADPALNVETEIEI 74
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 75 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 128
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNSPHIVGYK 61
IG+G + V A L G A K ++ +++ + +E L LN P+++ Y
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPNVIKYY 98
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIH---RNGGRLDESLIVSYTRQILQGLEYLHS 118
+ EDN+L N+ +E A G L+ I + + E + Y Q+ LE++HS
Sbjct: 99 ASFI--EDNEL--NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 119 NRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
RV+H DIK N+ + +G K+ D G ++ S + GTP +M+PE
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPA-FLSKQANDFLSNC 232
F SDIW++GC + EMA+ +P+ + L K + P +P+ S++ ++ C
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMC 274
Query: 233 LRRDPKER 240
+ DP++R
Sbjct: 275 INPDPEKR 282
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 51/304 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNS 54
++ + IG+G+ V A + +G+V A K L P + RE L LN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELNH 64
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQG 112
P+IV K DV +NKL L E+ D G L LI SY Q+LQG
Sbjct: 65 PNIV--KLLDVIHTENKLY--LVFEHVDQDLKKFMDASALTGIPL--PLIKSYLFQLLQG 118
Query: 113 LEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVA 167
L + HS+RV+H D+K +N+L+ GA K+ADFG A+ +++ T + APE+
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 168 RG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE---------- 216
G ++ A DIW++GC EM + A +P ++ + L++I + P+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 217 ---VPAF--------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCT 259
P+F L + LS L DP +R +A L HPF ++
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
Query: 260 KQIQ 263
++
Sbjct: 298 PHLR 301
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEF---LQREQKFLSSLNSPHIVGYK 61
T+G+GS V LAT ++ A K L KS+ ++RE +L L PHI+ K
Sbjct: 16 TLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII--K 73
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV + ++ + +EYA GG L D I R+ E + +QI+ +EY H +++
Sbjct: 74 LYDVITTPTDIV--MVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-HQGFAS 176
VH D+K N+L+ ++ KIADFG + ++ S G+P + APEV G+ + G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
D+W+ G + M G P+ + P L+K S + +P FLS A + + D
Sbjct: 190 DVWSCGIVLYVMLVGRLPFDDEFIPN--LFKKVNSC-VYVMPDFLSPGAQSLIRRMIVAD 246
Query: 237 PKERWAASQLLKHPF----LEEFCSCTKQIQES 265
P +R ++ + P+ L ++ +++Q S
Sbjct: 247 PMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGS 279
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 27/285 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS--EFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L ++ ++ A K E + E ++RE SL P+IV +K +T
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q++ G+ Y H+ +V H D+
Sbjct: 87 PTHLAIV----MEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KIADFG +K S+ + GTP ++APEV + E+ G +D+W
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ + +P+ +S + +S
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVA 260
Query: 236 DPKERWAASQLLKHP-FLEEFC-------SCTKQIQESNCSPTSI 272
DP +R + ++ H FL+ + T Q ES+ SI
Sbjct: 261 DPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQSI 305
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 27/249 (10%)
Query: 9 IGQGSSATV--------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
IG GS TV +A + F A+ +EFL RE + L P+IV +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV----NEFL-REVAIMKRLRHPNIVLF 99
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHS 118
G VT N ++ EY G+L +H++G R LDE +S + +G+ YLH+
Sbjct: 100 MGA-VTQPPN---LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 119 NR--VVHCDIKSRNILM-AESGAKIADFGCAKWESEAL----QSGGTPMFMAPEVARGEH 171
+VH D+KS N+L+ + K+ DFG ++ ++ + GTP +MAPEV R E
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
SD+++ G + E+A+ PW N +P V+ + + + E+P L+ Q +
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 232 CLRRDPKER 240
C +P +R
Sbjct: 275 CWTNEPWKR 283
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A + + K +F ++ E +
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRI--ISKRKFAIGSAREADPALNVETEIEI 207
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 208 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 261
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 27/267 (10%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
++ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 VITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQ---A 225
E G +D+W++G + SG +P+ T+ A S + E F S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE--EFFSQTSELA 249
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+G G+ V L SG K+ +S E ++ E + L SL+ P+I+ K +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII--KIFE 87
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEI---HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
V ED MY + ME GG L + I G L E + +Q++ L Y HS V
Sbjct: 88 VF-EDYHNMY-IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCA---KWESEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K NIL + S KI DFG A K + + + GT ++MAPEV + + F
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VTF 204
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF------LSKQANDF 228
DIW+ G + + +G P+ + V K Y P + L+ QA D
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTGTSLE-EVQQKATYKE-----PNYAVECRPLTPQAVDL 258
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
L L +DP+ R +A+Q+L H + ++
Sbjct: 259 LKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 19/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS--EFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L + ++ A K E + E +QRE SL P+IV +K +T
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q+L G+ Y HS ++ H D+
Sbjct: 88 PTHLAII----MEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDL 142
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KI DFG +K S+ + GTP ++APEV R E+ G +D+W
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVW 202
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ ++ +P+ +S + +S
Sbjct: 203 SCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD-DIRISPECCHLISRIFVA 261
Query: 236 DPKERWAASQLLKH 249
DP R + ++ H
Sbjct: 262 DPATRISIPEIKTH 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 27/267 (10%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
++ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 VITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQ---A 225
E G +D+W++G + SG +P+ T+ A S + E F S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE--EFFSQTSELA 249
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF-------------LQREQKF 48
++ T+G G+ V LA ++ A + + K +F ++ E +
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRI--ISKRKFAIGSAREADPALNVETEIEI 193
Query: 49 LSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQ 108
L LN P I+ K +ED Y + +E GG L D++ N RL E+ Y Q
Sbjct: 194 LKKLNHPCIIKIKNF-FDAED----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQ 247
Query: 109 ILQGLEYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKW--ESEALQS-GGTPMF 161
+L ++YLH N ++H D+K N+L++ + KI DFG +K E+ +++ GTP +
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 162 MAPEVARGE-HQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE--LPE 216
+APEV G+ A D W++G + SG P+ +++ +I + +PE
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
V A +S++A D + L DPK R+ + L+HP+L++
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 19/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS--EFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L +S ++ A K E + E ++RE SL P+IV +K +T
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q++ G+ Y H+ +V H D+
Sbjct: 86 PTHLAIV----MEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KI DFG +K S+ + GTP ++APEV + E+ G +D+W
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 200
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ + +P+ +S + +S
Sbjct: 201 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVA 259
Query: 236 DPKERWAASQLLKH 249
DP +R + ++ H
Sbjct: 260 DPAKRISIPEIRNH 273
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L MEY P G+L D + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 79 GVCYSAGRRNL--KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQG 173
+H ++ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 197 VASDVWSFGVVLYELFT 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 27/249 (10%)
Query: 9 IGQGSSATV--------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
IG GS TV +A + F A+ +EFL RE + L P+IV +
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV----NEFL-REVAIMKRLRHPNIVLF 99
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHS 118
G VT N ++ EY G+L +H++G R LDE +S + +G+ YLH+
Sbjct: 100 MGA-VTQPPN---LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 119 NR--VVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS----GGTPMFMAPEVARGEH 171
+VH ++KS N+L+ + K+ DFG ++ ++ S GTP +MAPEV R E
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 172 QGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSN 231
SD+++ G + E+A+ PW N +P V+ + + + E+P L+ Q +
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 232 CLRRDPKER 240
C +P +R
Sbjct: 275 CWTNEPWKR 283
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHI 57
D+ R +G G+ V+ SG + A K L ++ RE + L NSP+I
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
VG+ G + + ++ ME+ GG+L D++ + R+ E ++ + +L+GL YL
Sbjct: 77 VGFYGAFYSDGE----ISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 118 -SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQG 173
++++H D+K NIL+ G K+ DFG + +++ + GT +MAPE +G H
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYS 191
Query: 174 FASDIWAVGCTVIEMASGGAPWP 196
SDIW++G +++E+A G P P
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIP 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 25/266 (9%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
++ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 VITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTV--LYKIAYSRELPEVPAFLSKQAN 226
E G +D+W++G + SG +P+ T+ + ++Y + E + S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-EEFFSHTSELAK 250
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 40 EFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDE 99
E +++E K + L P+I+ +G + + L ME+A GG LN + +G R+
Sbjct: 51 ENVRQEAKLFAMLKHPNIIALRGVCLKEPN----LCLVMEFARGGPLNRVL--SGKRIPP 104
Query: 100 SLIVSYTRQILQGLEYLHSNRVV---HCDIKSRNILM---AESG------AKIADFGCAK 147
++V++ QI +G+ YLH +V H D+KS NIL+ E+G KI DFG A+
Sbjct: 105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 148 -WE-SEALQSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVL 205
W + + + G +MAPEV R SD+W+ G + E+ +G P+ D + V
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-RGIDGLAVA 223
Query: 206 YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
Y +A ++ +P+ + + +C DP R + + +L
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 16/230 (6%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIV 103
RE + L L+ P+I+ K ++ ED+ Y + E GG L DEI + R E
Sbjct: 70 REVELLKKLDHPNIM--KLFEIL-EDSSSFY-IVGELYTGGELFDEIIKRK-RFSEHDAA 124
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILM----AESGAKIADFG---CAKWESEALQSG 156
+Q+ G+ Y+H + +VH D+K NIL+ + KI DFG C + ++
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSREL 214
GT ++APEV RG + D+W+ G + + SG P+ N D + + Y+ +L
Sbjct: 185 GTAYYIAPEVLRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQE 264
P+ +S A D + L P R A+Q L+HP+++++ S T I +
Sbjct: 244 PQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISD 292
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 25/266 (9%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
++ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 VITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTV--LYKIAYSRELPEVPAFLSKQAN 226
E G +D+W++G + SG +P+ T+ + ++Y + E + S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-EEFFSHTSELAK 250
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL---QREQKFLSSLNSPHIVGYK 61
+G+G+ +V + +G+V A K + E L +RE + L SL +IV YK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
G ++ L L ME+ P G+L + + ++ R+D ++ YT QI +G+EYL + R
Sbjct: 81 GVCYSAGRRNL--KLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 122 VHCDIKSRNILMA-ESGAKIADFGCAKW------ESEALQSGGTPMF-MAPEVARGEHQG 173
+H D+ +RNIL+ E+ KI DFG K + + G +P+F APE
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 174 FASDIWAVGCTVIEMAS 190
ASD+W+ G + E+ +
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 36/270 (13%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ--------REQKFLS-SLNSPHIV 58
+G+GS V LA +GD++A K L K LQ E++ LS + N P +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
C T ++L + ME+ GG L I ++ R DE+ Y +I+ L +LH
Sbjct: 88 QLFCCFQTP--DRLFF--VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHD 142
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGE 170
+++ D+K N+L+ G K+ADFG K E + +G GTP ++APE+ +
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 171 HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
G A D WA+G + EM G AP+ A+ L++ + E+ P +L + A L
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPF--EAENEDDLFEAILNDEV-VYPTWLHEDATGILK 256
Query: 231 NCLRRDPKERWAA------SQLLKHPFLEE 254
+ + ++P R + +L+HPF +E
Sbjct: 257 SFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 25/266 (9%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS---------EFLQREQKFLSSLNSPH 56
G +G G A V +G +AAK + +S E ++RE L + +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
++ DV +N+ L +E GG L D + + L E S+ +QIL G+ YL
Sbjct: 77 VITLH--DVY--ENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYL 131
Query: 117 HSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESEALQSG---GTPMFMAPEVAR 168
H+ ++ H D+K NI++ + K+ DFG A + ++ GTP F+APE+
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTV--LYKIAYSRELPEVPAFLSKQAN 226
E G +D+W++G + SG +P+ T+ + ++Y + E + S+ A
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD-EEFFSHTSELAK 250
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFL 252
DF+ L ++ ++R + L+HP++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R E Y +I+ LEY
Sbjct: 66 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVL 177
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 234
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
+G+GS V ++G A K L F E + L SP IV G +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL--EVFRAEELMACAGLTSPRIVPLYG----AV 154
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
N+FME GG+L + + G L E + Y Q L+GLEYLHS R++H D+K+
Sbjct: 155 REGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 213
Query: 129 RNILMAESG--AKIADFG---CAKWE--SEALQSG----GTPMFMAPEVARGEHQGFASD 177
N+L++ G A + DFG C + + ++L +G GT MAPEV G D
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVD 273
Query: 178 IWAVGCTVIEMASGGAPWPN-AADPMTVLYKIAYS----RELPEVPAFLSKQANDFLSNC 232
+W+ C ++ M +G PW P+ + KIA RE+P A L+ QA +
Sbjct: 274 VWSSCCMMLHMLNGCHPWTQFFRGPLCL--KIASEPPPVREIPPSCAPLTAQA---IQEG 328
Query: 233 LRRDPKERWAASQL 246
LR++P R +A++L
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 20/252 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEF---LQREQKFLSSLNSPHIVGYK 61
T+G+GS V LA +G A K L KS+ ++RE +L L PHI+ K
Sbjct: 20 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII--K 77
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV ++++ + +EYA G L D I + ++ E + +QI+ +EY H +++
Sbjct: 78 LYDVIKSKDEII--MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-HQGFAS 176
VH D+K N+L+ E KIADFG + ++ S G+P + APEV G+ + G
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
D+W+ G + M P+ + + P VL+K S + +P FLS A + L +
Sbjct: 194 DVWSCGVILYVMLCRRLPFDDESIP--VLFK-NISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 237 PKERWAASQLLK 248
P R + ++++
Sbjct: 251 PLNRISIHEIMQ 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 20/252 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEF---LQREQKFLSSLNSPHIVGYK 61
T+G+GS V LA +G A K L KS+ ++RE +L L PHI+ K
Sbjct: 21 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII--K 78
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV ++++ + +EYA G L D I + ++ E + +QI+ +EY H +++
Sbjct: 79 LYDVIKSKDEII--MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-HQGFAS 176
VH D+K N+L+ E KIADFG + ++ S G+P + APEV G+ + G
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
D+W+ G + M P+ + + P VL+K S + +P FLS A + L +
Sbjct: 195 DVWSCGVILYVMLCRRLPFDDESIP--VLFK-NISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 237 PKERWAASQLLK 248
P R + ++++
Sbjct: 252 PLNRISIHEIMQ 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 69 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 123
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVL 180
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 237
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 20/252 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEF---LQREQKFLSSLNSPHIVGYK 61
T+G+GS V LA +G A K L KS+ ++RE +L L PHI+ K
Sbjct: 11 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII--K 68
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV ++++ + +EYA G L D I + ++ E + +QI+ +EY H +++
Sbjct: 69 LYDVIKSKDEII--MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-HQGFAS 176
VH D+K N+L+ E KIADFG + ++ S G+P + APEV G+ + G
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
D+W+ G + M P+ + + P VL+K S + +P FLS A + L +
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDESIP--VLFK-NISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 237 PKERWAASQLLK 248
P R + ++++
Sbjct: 242 PLNRISIHEIMQ 253
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 20/252 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEF---LQREQKFLSSLNSPHIVGYK 61
T+G+GS V LA +G A K L KS+ ++RE +L L PHI+ K
Sbjct: 15 TLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII--K 72
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV ++++ + +EYA G L D I + ++ E + +QI+ +EY H +++
Sbjct: 73 LYDVIKSKDEII--MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKWESEA---LQSGGTPMFMAPEVARGE-HQGFAS 176
VH D+K N+L+ E KIADFG + ++ S G+P + APEV G+ + G
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 177 DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
D+W+ G + M P+ + + P VL+K S + +P FLS A + L +
Sbjct: 189 DVWSCGVILYVMLCRRLPFDDESIP--VLFK-NISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 237 PKERWAASQLLK 248
P R + ++++
Sbjct: 246 PLNRISIHEIMQ 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 66 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVL 177
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 234
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 71 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 125
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVL 182
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 239
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 19/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK--SEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L +S ++ A K E + + ++RE SL P+IV +K +T
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q++ G+ Y H+ +V H D+
Sbjct: 87 PTHLAIV----MEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KI DFG +K S+ + GTP ++APEV + E+ G +D+W
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ + +P+ +S + +S
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVA 260
Query: 236 DPKERWAASQLLKH 249
DP +R + ++ H
Sbjct: 261 DPAKRISIPEIRNH 274
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 66 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVL 177
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 234
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 66 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVL 177
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 234
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSP 55
D+ +G+G+ V L +G +A K + K E E + L + P
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+ K T ++L + MEYA GG L + R +E Y +I+ LEY
Sbjct: 66 FLTALKYAFQTH--DRLCF--VMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
LHS VV+ DIK N+++ + G KI DFG K E + G GTP ++APEV
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVL 177
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G A D W +G + EM G P+ N L+++ E+ P LS +A
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEEI-RFPRTLSPEAKS 234
Query: 228 FLSNCLRRDPKERWA-----ASQLLKHPFL 252
L+ L++DPK+R A ++++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIV 103
RE + L L+ P+I+ K ++ ED+ Y + E GG L DEI + R E
Sbjct: 70 REVELLKKLDHPNIM--KLFEIL-EDSSSFY-IVGELYTGGELFDEIIKRK-RFSEHDAA 124
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILM----AESGAKIADFG---CAKWESEALQSG 156
+Q+ G+ Y+H + +VH D+K NIL+ + KI DFG C + ++
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSREL 214
GT ++APEV RG + D+W+ G + + SG P+ N D + + Y+ +L
Sbjct: 185 GTAYYIAPEVLRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
P+ +S A D + L P R A+Q L+HP+++++ S
Sbjct: 244 PQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 74 IVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NIL++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P++V Y+ + RE P P+ LS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQ--HVREDPIPPSARHEGLSA 248
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 249 DLDAVVLKALAKNPENRY 266
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIV 103
RE + L L+ P+I+ K ++ ED+ Y + E GG L DEI + R E
Sbjct: 70 REVELLKKLDHPNIM--KLFEIL-EDSSSFY-IVGELYTGGELFDEIIKRK-RFSEHDAA 124
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILM----AESGAKIADFG---CAKWESEALQSG 156
+Q+ G+ Y+H + +VH D+K NIL+ + KI DFG C + ++
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSREL 214
GT ++APEV RG + D+W+ G + + SG P+ N D + + Y+ +L
Sbjct: 185 GTAYYIAPEVLRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
P+ +S A D + L P R A+Q L+HP+++++ S
Sbjct: 244 PQWRT-ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
+G+GS V ++G A K L F E + L SP IV G +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL--EVFRAEELMACAGLTSPRIVPLYG----AV 135
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
N+FME GG+L ++ + G L E + Y Q L+GLEYLHS R++H D+K+
Sbjct: 136 REGPWVNIFMELLEGGSLG-QLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKA 194
Query: 129 RNILMAESG--AKIADFG---CAKWE--SEALQSG----GTPMFMAPEVARGEHQGFASD 177
N+L++ G A + DFG C + + + L +G GT MAPEV G D
Sbjct: 195 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVD 254
Query: 178 IWAVGCTVIEMASGGAPWPN-AADPMTVLYKIAYS----RELPEVPAFLSKQANDFLSNC 232
+W+ C ++ M +G PW P+ + KIA RE+P A L+ QA +
Sbjct: 255 VWSSCCMMLHMLNGCHPWTQFFRGPLCL--KIASEPPPVREIPPSCAPLTAQA---IQEG 309
Query: 233 LRRDPKERWAASQL 246
LR++P R +A++L
Sbjct: 310 LRKEPIHRVSAAEL 323
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 22/253 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L S L RE + LN P+IV K
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIV--KL 78
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L EYA GG + D + +G R E + RQI+ ++Y H +V
Sbjct: 79 FEVI-ETEKTLY-LVXEYASGGEVFDYLVAHG-RXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HCDIKSRNILM-AESGAKIADFGCAK---WESEALQSGGTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ A+ KIADFG + + ++ G P + APE+ +G ++ G D
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 178 IWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+W++G + + SG P+ N + + + Y +P + S + L L
Sbjct: 196 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----RIPFYXSTDCENLLKKFLIL 250
Query: 236 DPKERWAASQLLK 248
+P +R Q+ K
Sbjct: 251 NPSKRGTLEQIXK 263
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 19/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK--SEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L +S ++ A K E + E ++RE SL P+IV +K +T
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q++ G+ Y H+ +V H D+
Sbjct: 87 PTHLAIV----MEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KI FG +K S+ + GTP ++APEV + E+ G +D+W
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ + +P+ +S + +S
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVA 260
Query: 236 DPKERWAASQLLKH 249
DP +R + ++ H
Sbjct: 261 DPAKRISIPEIRNH 274
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 19/254 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS--EFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G+ L +S ++ A K E + E ++RE SL P+IV +K +T
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
++ MEYA GG L + I N GR E + +Q++ G+ Y H+ +V H D+
Sbjct: 87 PTHLAIV----MEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 127 KSRNILMAESGA---KIADFGCAK---WESEALQSGGTPMFMAPEV-ARGEHQGFASDIW 179
K N L+ S A KI FG +K S+ + GTP ++APEV + E+ G +D+W
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 180 AVGCTVIEMASGGAPWPNAADP----MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
+ G T+ M G P+ + +P T+ + +P+ +S + +S
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVA 260
Query: 236 DPKERWAASQLLKH 249
DP +R + ++ H
Sbjct: 261 DPAKRISIPEIRNH 274
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 74 IVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NI+++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P++V Y+ + RE P P+ LS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQ--HVREDPIPPSARHEGLSA 248
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 249 DLDAVVLKALAKNPENRY 266
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 15/198 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAK---STEL-PKS-EFLQREQKFLSSLNSPHIVGYKG 62
TIG+G+ A V LA + +G A K T+L P S + L RE + + LN P+IV K
Sbjct: 22 TIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV--KL 79
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V E K +Y L MEYA GG + D + +G R+ E + RQI+ ++Y H +V
Sbjct: 80 FEVI-ETEKTLY-LVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKYIV 136
Query: 123 HCDIKSRNILM-AESGAKIADFGCAKWESEALQSG---GTPMFMAPEVARG-EHQGFASD 177
H D+K+ N+L+ + KIADFG + + + G+P + APE+ +G ++ G D
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 178 IWAVGCTVIEMASGGAPW 195
+W++G + + SG P+
Sbjct: 197 VWSLGVILYTLVSGSLPF 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFA----AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G G+ + V LA R+ + A AK K ++ E L + P+IV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA---L 81
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSNRV 121
D E +Y L M+ GG L D I G D S ++ Q+L ++YLH +
Sbjct: 82 DDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGI 137
Query: 122 VHCDIKSRNILMA----ESGAKIADFGCAKWE---SEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K N+L +S I+DFG +K E S + GTP ++APEV +
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + G P+ N A + K Y + P +S A DF+ +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHL 256
Query: 233 LRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
+ +DP++R+ Q L+HP++ + K I +S
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFA----AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G G+ + V LA R+ + A AK K ++ E L + P+IV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA---L 81
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSNRV 121
D E +Y L M+ GG L D I G D S ++ Q+L ++YLH +
Sbjct: 82 DDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGI 137
Query: 122 VHCDIKSRNILM----AESGAKIADFGCAKWE---SEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K N+L +S I+DFG +K E S + GTP ++APEV +
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + G P+ N A + K Y + P +S A DF+ +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHL 256
Query: 233 LRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
+ +DP++R+ Q L+HP++ + K I +S
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFA----AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G G+ + V LA R+ + A AK K ++ E L + P+IV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA---L 81
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSNRV 121
D E +Y L M+ GG L D I G D S ++ Q+L ++YLH +
Sbjct: 82 DDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGI 137
Query: 122 VHCDIKSRNILMA----ESGAKIADFGCAKWE---SEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K N+L +S I+DFG +K E S + GTP ++APEV +
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + G P+ N A + K Y + P +S A DF+ +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHL 256
Query: 233 LRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
+ +DP++R+ Q L+HP++ + K I +S
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKST------ELPKSEFLQREQKFLSSLNSPHIVGYK 61
+G+GS V L +G A K + E L RE + L L+ P+I+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
ED Y L E GG L DEI + +D + I+ RQ+L G+ Y+H N
Sbjct: 93 EF---FEDKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARII---RQVLSGITYMHKN 145
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCAKW--ESEALQSG-GTPMFMAPEVARGEHQ 172
++VH D+K N+L+ ++ +I DFG + S+ ++ GT ++APEV G +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD 205
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
D+W+ G + + SG P+ N A+ +L K+ Y+ ELP+ +S+ A D +
Sbjct: 206 E-KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKK-VSESAKDLI 262
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L P R +A L H +++ + TK+ Q S P+ LD I N
Sbjct: 263 RKMLTYVPSMRISARDALDHEWIQTY---TKE-QISVDVPS--LDNAILN 306
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 74 IVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NI+++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P++V Y+ + RE P P+ LS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQ--HVREDPIPPSARHEGLSA 248
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 249 DLDAVVLKALAKNPENRY 266
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 8 TIGQGSSATVSLATSLRSGDVFA----AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G G+ + V LA R+ + A AK K ++ E L + P+IV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA---L 81
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG--GRLDESLIVSYTRQILQGLEYLHSNRV 121
D E +Y L M+ GG L D I G D S ++ Q+L ++YLH +
Sbjct: 82 DDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLHDLGI 137
Query: 122 VHCDIKSRNILM----AESGAKIADFGCAKWE---SEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K N+L +S I+DFG +K E S + GTP ++APEV +
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + G P+ N A + K Y + P +S A DF+ +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHL 256
Query: 233 LRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
+ +DP++R+ Q L+HP++ + K I +S
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 289
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 28/266 (10%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKST------ELPKSEFLQREQKFLSSLNSPHIVGYK 61
+G+GS V L +G A K + E L RE + L L+ P+I+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
ED Y L E GG L DEI + +D + I+ RQ+L G+ Y+H N
Sbjct: 99 EF---FEDKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARII---RQVLSGITYMHKN 151
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCAKW--ESEALQSG-GTPMFMAPEVARGEHQ 172
++VH D+K N+L+ ++ +I DFG + S+ ++ GT ++APEV G +
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD 211
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
D+W+ G + + SG P+ N A+ +L K+ Y+ ELP+ +S+ A D +
Sbjct: 212 E-KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKK-VSESAKDLI 268
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEF 255
L P R +A L H +++ +
Sbjct: 269 RKMLTYVPSMRISARDALDHEWIQTY 294
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 74 IVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NI+++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P++V Y+ + RE P P+ LS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQ--HVREDPIPPSARHEGLSA 248
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 249 DLDAVVLKALAKNPENRY 266
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 91 IVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 148
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NI+++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P++V Y+ + RE P P+ LS
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQ--HVREDPIPPSARHEGLSA 265
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 266 DLDAVVLKALAKNPENRY 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKST------ELPKSEFLQREQKFLSSLNSPHIVGYK 61
+G+GS V L +G A K + E L RE + L L+ P+I+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
ED Y L E GG L DEI + +D + I+ RQ+L G+ Y+H N
Sbjct: 116 EF---FEDKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARII---RQVLSGITYMHKN 168
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCAKW--ESEALQSG-GTPMFMAPEVARGEHQ 172
++VH D+K N+L+ ++ +I DFG + S+ ++ GT ++APEV G +
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD 228
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
D+W+ G + + SG P+ N A+ +L K+ Y+ ELP+ +S+ A D +
Sbjct: 229 E-KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKK-VSESAKDLI 285
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L P R +A L H +++ + TK+ Q S P+ LD I N
Sbjct: 286 RKMLTYVPSMRISARDALDHEWIQTY---TKE-QISVDVPS--LDNAILN 329
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKST------ELPKSEFLQREQKFLSSLNSPHIVGYK 61
+G+GS V L +G A K + E L RE + L L+ P+I+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
ED Y L E GG L DEI + +D + I+ RQ+L G+ Y+H N
Sbjct: 117 EF---FEDKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARII---RQVLSGITYMHKN 169
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCAKW--ESEALQSG-GTPMFMAPEVARGEHQ 172
++VH D+K N+L+ ++ +I DFG + S+ ++ GT ++APEV G +
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD 229
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
D+W+ G + + SG P+ N A+ +L K+ Y+ ELP+ +S+ A D +
Sbjct: 230 E-KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKK-VSESAKDLI 286
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L P R +A L H +++ + TK+ Q S P+ LD I N
Sbjct: 287 RKMLTYVPSMRISARDALDHEWIQTY---TKE-QISVDVPS--LDNAILN 330
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 86 LNDEIHRNGGRLD----ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA--- 138
+N IH LD E LI + RQI L YLH+ + H DIK N L + + +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 139 KIADFGCAKWESEALQSG---------GTPMFMAPEV--ARGEHQGFASDIWAVGCTVIE 187
K+ DFG +K E L +G GTP F+APEV E G D W+ G +
Sbjct: 210 KLVDFGLSK-EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 188 MASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDPKERWAASQ 245
+ G P+P D T+ ++ + E P + LS A D LSN L R+ ER+ A +
Sbjct: 269 LLMGAVPFPGVNDADTI-SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMR 327
Query: 246 LLKHPFLEEF 255
L+HP++ +F
Sbjct: 328 ALQHPWISQF 337
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 24/258 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK--STELPK--SEFLQ--REQKFLSSLNSPH 56
+ G +G G + V LA LR A K +L + S +L+ RE + ++LN P
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 57 IVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
IV Y + + L Y + MEY G TL D +H G + + Q L +
Sbjct: 74 IVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNF 131
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSG-------GTPMFMAPEVA 167
H N ++H D+K NI+++ + A K+ DFG A+ +++ S GT +++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF----LSK 223
RG+ SD++++GC + E+ +G P+ P +V Y+ + RE P P+ LS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPDSVAYQ--HVREDPIPPSARHEGLSA 248
Query: 224 QANDFLSNCLRRDPKERW 241
+ + L ++P+ R+
Sbjct: 249 DLDAVVLKALAKNPENRY 266
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 42/285 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP-KSEFL----QREQKFLSSLNSPHIVGYKGC 63
+G G+ +V A RSG+ A K P +SE RE L + +++G
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL--L 89
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
DV + + L N + Y + ++ + G + E I Q+L+GL+Y+HS VV
Sbjct: 90 DVFTPASSLR-NFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--TPMFMAPEVARG-EHQGFASDI 178
H D+K N+ + E KI DFG A+ ++A +G T + APEV H DI
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR-HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDI 207
Query: 179 WAVGCTVIEMASGGAPW--PNAADPMTVLYKI------------------AYSRELPEVP 218
W+VGC + EM +G + + D +T + K+ +Y + LP+ P
Sbjct: 208 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 267
Query: 219 --------AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
S QA D L L D +R A+Q L HPF E F
Sbjct: 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 35/282 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSPHIVGYKG 62
+G+G+ V L +G +A K + + K E E + L + P + K
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
T ++L + MEYA GG L + R E Y +I+ L+YLHS + V
Sbjct: 219 SFQTH--DRLCF--VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV 273
Query: 122 VHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQG 173
V+ D+K N+++ + G KI DFG K E ++ G GTP ++APEV G
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDNDYG 330
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
A D W +G + EM G P+ N L+++ E+ P L +A LS L
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILMEEI-RFPRTLGPEAKSLLSGLL 387
Query: 234 RRDPKERWA-----ASQLLKHPFLEEFCSCT-KQIQESNCSP 269
++DPK+R A ++++H F F + + E SP
Sbjct: 388 KKDPKQRLGGGSEDAKEIMQHRF---FAGIVWQHVYEKKLSP 426
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 35/282 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSPHIVGYKG 62
+G+G+ V L +G +A K + + K E E + L + P + K
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
T ++L + MEYA GG L + R E Y +I+ L+YLHS + V
Sbjct: 216 SFQTH--DRLCF--VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV 270
Query: 122 VHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQG 173
V+ D+K N+++ + G KI DFG K E ++ G GTP ++APEV G
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDNDYG 327
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
A D W +G + EM G P+ N L+++ E+ P L +A LS L
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILMEEI-RFPRTLGPEAKSLLSGLL 384
Query: 234 RRDPKERWA-----ASQLLKHPFLEEFCSCT-KQIQESNCSP 269
++DPK+R A ++++H F F + + E SP
Sbjct: 385 KKDPKQRLGGGSEDAKEIMQHRF---FAGIVWQHVYEKKLSP 423
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 34/290 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKST------ELPKSEFLQREQKFLSSLNSPHIVGYK 61
+G+GS V L +G A K + E L RE + L L+ P+I
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
ED Y L E GG L DEI + +D + I+ RQ+L G+ Y H N
Sbjct: 93 EF---FEDKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARII---RQVLSGITYXHKN 145
Query: 120 RVVHCDIKSRNILM----AESGAKIADFGCA---KWESEALQSGGTPMFMAPEVARGEHQ 172
++VH D+K N+L+ ++ +I DFG + + + GT ++APEV G +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYD 205
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
D+W+ G + + SG P+ N A+ +L K+ Y+ ELP+ +S+ A D +
Sbjct: 206 E-KCDVWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKK-VSESAKDLI 262
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
L P R +A L H +++ + TK+ Q S P+ LD I N
Sbjct: 263 RKXLTYVPSXRISARDALDHEWIQTY---TKE-QISVDVPS--LDNAILN 306
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 42/285 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP-KSEFL----QREQKFLSSLNSPHIVGYKGC 63
+G G+ +V A RSG+ A K P +SE RE L + +++G
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL--L 107
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
DV + + L N + Y + ++ + G E I Q+L+GL+Y+HS VV
Sbjct: 108 DVFTPASSLR-NFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--TPMFMAPEVARG-EHQGFASDI 178
H D+K N+ + E KI DFG A+ ++A +G T + APEV H DI
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR-HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDI 225
Query: 179 WAVGCTVIEMASGGAPW--PNAADPMTVLYKI------------------AYSRELPEVP 218
W+VGC + EM +G + + D +T + K+ +Y + LP+ P
Sbjct: 226 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 285
Query: 219 --------AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
S QA D L L D +R A+Q L HPF E F
Sbjct: 286 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 35/282 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSPHIVGYKG 62
+G+G+ V L +G +A K + + K E E + L + P + K
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
T ++L + MEYA GG L + R E Y +I+ L+YLHS + V
Sbjct: 76 SFQTH--DRLCF--VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV 130
Query: 122 VHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQG 173
V+ D+K N+++ + G KI DFG K E ++ G GTP ++APEV G
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYG 187
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
A D W +G + EM G P+ N L+++ E+ P L +A LS L
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILMEEI-RFPRTLGPEAKSLLSGLL 244
Query: 234 RRDPKERWA-----ASQLLKHPFLEEFCSCT-KQIQESNCSP 269
++DPK+R A ++++H F F + + E SP
Sbjct: 245 KKDPKQRLGGGSEDAKEIMQHRF---FAGIVWQHVYEKKLSP 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIVGY 60
+G+G VSL T+ +G++ A K+ + L QRE + L +L HIV Y
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
KGC + + L MEY P G+L D + R+ L + L+ + +QI +G+ YLH+
Sbjct: 76 KGC--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQH 131
Query: 121 VVHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQ 172
+H + +RN+L+ + KI DFG AK E + G +P+F APE +
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 191
Query: 173 GFASDIWAVGCTVIEMAS 190
+ASD+W+ G T+ E+ +
Sbjct: 192 YYASDVWSFGVTLYELLT 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 51/299 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLNSPHIVGY 60
IG+G+ +V+ SG + A K +S ++EQK + S + P+IV +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI---RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 61 KG-------CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
G C + E ++ F +Y L+D I E ++ T ++ L
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYV-YSVLDDVIP-------EEILGKITLATVKAL 138
Query: 114 EYLHSN-RVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL---QSGGTPMFMAPEV-- 166
+L N +++H DIK NIL+ SG K+ DFG + +++ + G +MAPE
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 167 ARGEHQGF--ASDIWAVGCTVIEMASGGAPWP---NAADPMTVLYK-----IAYSRELPE 216
QG+ SD+W++G T+ E+A+G P+P + D +T + K ++ S E
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF 258
Query: 217 VPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQ 275
P+F+ +F++ CL +D +R +LLKHPF+ + ++ E C ILDQ
Sbjct: 259 SPSFI-----NFVNLCLTKDESKRPKYKELLKHPFILMY---EERAVEVACYVCKILDQ 309
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 56/290 (19%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKS-----TELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G+GS V + +G + A K + + RE K L L ++V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL--L 90
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLND-EIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+V + + + L E+ L+D E+ NG LD ++ Y QI+ G+ + HS+ ++
Sbjct: 91 EVCKKKKR--WYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 123 HCDIKSRNILMAESG-AKIADFGCAK--------WESEALQSGGTPMFMAPEVARGEHQ- 172
H DIK NIL+++SG K+ DFG A+ ++ E T + APE+ G+ +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV----ATRWYRAPELLVGDVKY 202
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAY--------------------SR 212
G A D+WA+GC V EM G +P +D + LY I
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSD-IDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 213 ELPEVP---------AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
LPE+ LS+ D CL DP +R ++LL H F +
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTELPKSEFL----QREQKFLSSLNSPHIVGY 60
+G+G VSL T+ +G++ A K+ + L QRE + L +L HIV Y
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
KGC + + L MEY P G+L D + R+ L + L+ + +QI +G+ YLH+
Sbjct: 77 KGC--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQH 132
Query: 121 VVHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQ 172
+H + +RN+L+ + KI DFG AK E + G +P+F APE +
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 192
Query: 173 GFASDIWAVGCTVIEMAS 190
+ASD+W+ G T+ E+ +
Sbjct: 193 YYASDVWSFGVTLYELLT 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 35/282 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSPHIVGYKG 62
+G+G+ V L +G +A K + + K E E + L + P + K
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
T ++L + MEYA GG L + R E Y +I+ L+YLHS + V
Sbjct: 77 SFQTH--DRLCF--VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV 131
Query: 122 VHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQG 173
V+ D+K N+++ + G KI DFG K E ++ G GTP ++APEV G
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
A D W +G + EM G P+ N L+++ E+ P L +A LS L
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILMEEI-RFPRTLGPEAKSLLSGLL 245
Query: 234 RRDPKERWA-----ASQLLKHPFLEEFCSCT-KQIQESNCSP 269
++DPK+R A ++++H F F + + E SP
Sbjct: 246 KKDPKQRLGGGSEDAKEIMQHRF---FAGIVWQHVYEKKLSP 284
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 35/282 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE----LPKSEFLQR--EQKFLSSLNSPHIVGYKG 62
+G+G+ V L +G +A K + + K E E + L + P + K
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
T ++L + MEYA GG L + R E Y +I+ L+YLHS + V
Sbjct: 78 SFQTH--DRLCF--VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV 132
Query: 122 VHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQG 173
V+ D+K N+++ + G KI DFG K E ++ G GTP ++APEV G
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDNDYG 189
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
A D W +G + EM G P+ N L+++ E+ P L +A LS L
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILMEEI-RFPRTLGPEAKSLLSGLL 246
Query: 234 RRDPKERWA-----ASQLLKHPFLEEFCSCT-KQIQESNCSP 269
++DPK+R A ++++H F F + + E SP
Sbjct: 247 KKDPKQRLGGGSEDAKEIMQHRF---FAGIVWQHVYEKKLSP 285
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 30/264 (11%)
Query: 8 TIGQGSSATVSLA---TSLRSGDVFAAKSTELPKSEFLQR-----EQKFLSSLNSPHIVG 59
+GQGS V L T SG ++A K + + R E+ L+ +N P +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
T + KL L +++ GG L + + +E + Y ++ GL++LHS
Sbjct: 95 LHYAFQT--EGKLY--LILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALGLDHLHSL 149
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVARGEHQGF 174
+++ D+K NIL+ E G K+ DFG +K E +A GT +MAPEV +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 175 ASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
++D W+ G + EM +G P+ + + MT++ K +P FLS +A L
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG-----MPQFLSTEAQSLLRAL 264
Query: 233 LRRDPKERW-----AASQLLKHPF 251
+R+P R A ++ +H F
Sbjct: 265 FKRNPANRLGSGPDGAEEIKRHVF 288
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF--------LQREQKFLSSLN 53
D+ G +G+G V LA +S + A K L KS+ L+RE + + L+
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKV--LFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P+I+ D + +Y L +EYAP G L E+ ++ DE + ++ L
Sbjct: 82 HPNILRLYN---YFYDRRRIY-LILEYAPRGELYKELQKSCT-FDEQRTATIMEELADAL 136
Query: 114 EYLHSNRVVHCDIKSRN-ILMAESGAKIADFGCAKWESEA--LQSG---GTPMFMAPEVA 167
Y H +V+H DIK N +L + KIADFG W A L+ GT ++ PE+
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGLKGELKIADFG---WSVHAPSLRRKTMCGTLDYLPPEMI 193
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
G D+W +G E+ G P+ +A+ T Y+ +L + PA + A D
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET--YRRIVKVDL-KFPASVPTGAQD 250
Query: 228 FLSNCLRRDPKERWAASQLLKHPFL 252
+S LR +P ER +Q+ HP++
Sbjct: 251 LISKLLRHNPSERLPLAQVSAHPWV 275
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 20/198 (10%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTEL---PKSEF-LQREQKFLSSLNSPHIVGY 60
+G+G VSL T+ +G++ A K+ + P+ ++E L +L HI+ Y
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
KGC + L L MEY P G+L D + R+ L + L+ + +QI +G+ YLHS
Sbjct: 82 KGCCEDQGEKSL--QLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHSQH 137
Query: 121 VVHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQ 172
+H ++ +RN+L+ + KI DFG AK E + G +P+F APE +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF 197
Query: 173 GFASDIWAVGCTVIEMAS 190
+ASD+W+ G T+ E+ +
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 123/289 (42%), Gaps = 54/289 (18%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK----STELPK-SEFLQREQKFLSSLNSPHIVGYKGC 63
IG+GS V + +G + A K S + P + RE + L L P++V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL--L 68
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVH 123
+V +L +L EY L+ E+ R + E L+ S T Q LQ + + H + +H
Sbjct: 69 EVFRRKRRL--HLVFEYCDHTVLH-ELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 124 CDIKSRNILMAE-SGAKIADFGCAK--------WESEALQSGGTPMFMAPEVARGEHQ-G 173
D+K NIL+ + S K+ DFG A+ ++ E T + +PE+ G+ Q G
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV----ATRWYRSPELLVGDTQYG 181
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSR--------------------E 213
D+WA+GC E+ SG WP +D + LY I + +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSD-VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 214 LPEVPAF---------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
+P+ +S A L CL DP ER QLL HP+ E
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 25/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK------SEFLQREQKFLSSLNSPHIVGYKG 62
+G+G A V S +G +AAK + + +E L + + P ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH- 95
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDE-IHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
+V ++++ L +EYA GG + + + E+ ++ +QIL+G+ YLH N +
Sbjct: 96 -EVYENTSEII--LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAK---WESEALQSGGTPMFMAPEVARGEHQGF 174
VH D+K +NIL++ KI DFG ++ E + GTP ++APE+ +
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVL----YKIAYSRELPEVPAFLSKQANDFLS 230
A+D+W +G + + +P+ + T L + YS E + +S+ A DF+
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE---ETFSSVSQLATDFIQ 269
Query: 231 NCLRRDPKERWAASQLLKHPFLEE 254
+ L ++P++R A L H +L++
Sbjct: 270 SLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAA------KSTE--LPKSEFLQREQKFLSSLNS---PHI 57
IG+G+ V A L++G F A ++ E +P S RE L L + P++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNV 76
Query: 58 VG-YKGCDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
V + C V+ D + L E+ T D++ G + I Q+L+GL+
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLD 134
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWES--EALQSGGTPM-FMAPEVARGE 170
+LHS+RVVH D+K +NIL+ SG K+ADFG A+ S AL S + + APEV
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 171 HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP---------EVP--A 219
D+W+VGC EM + ++D + L KI LP +P A
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 220 FLSKQA--------------NDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
F SK A D L CL +P +R +A L HP+ ++ C + + +S
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENL-DS 312
Query: 266 NCSPT 270
+ P+
Sbjct: 313 HLPPS 317
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
+G+GS V ++G A K L F E + L+SP IV G +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRVEELVACAGLSSPRIVPLYG----AV 135
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
N+FME GG+L I + G L E + Y Q L+GLEYLH+ R++H D+K+
Sbjct: 136 REGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 129 RNILMAESGAKIA--DFG---CAKWE--SEALQSG----GTPMFMAPEVARGEHQGFASD 177
N+L++ G++ A DFG C + + ++L +G GT MAPEV G+ D
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 254
Query: 178 IWAVGCTVIEMASGGAPW 195
IW+ C ++ M +G PW
Sbjct: 255 IWSSCCMMLHMLNGCHPW 272
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 125/287 (43%), Gaps = 51/287 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGYKGC 63
IG+G+ V A + G+ FA K L K + RE L L +IV K
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV--KLY 66
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVH 123
DV +L+ L E+ L + G L+ S+ Q+L G+ Y H RV+H
Sbjct: 67 DVIHTKKRLV--LVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 124 CDIKSRNILMAESG-AKIADFGCA--------KWESEALQSGGTPMFMAPEVARGEHQGF 174
D+K +N+L+ G KIADFG A K+ E + T + AP+V G +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYS 179
Query: 175 AS-DIWAVGCTVIEMASGGAPWPNA--ADPMTVLYKIAYS---------RELPEV-PAF- 220
+ DIW+VGC EM +G +P AD + +++I + ELP+ P F
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 221 -------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
L + D LS L+ DP +R A Q L+H + +E
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
+G+GS V ++G A K L F E + L+SP IV G +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRVEELVACAGLSSPRIVPLYG----AV 119
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
N+FME GG+L I + G L E + Y Q L+GLEYLH+ R++H D+K+
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 129 RNILMAESGAKIA--DFG---CAKWE--SEALQSG----GTPMFMAPEVARGEHQGFASD 177
N+L++ G++ A DFG C + + ++L +G GT MAPEV G+ D
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 178 IWAVGCTVIEMASGGAPW 195
IW+ C ++ M +G PW
Sbjct: 239 IWSSCCMMLHMLNGCHPW 256
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTEL---PKSEF-LQREQKFLSSLNSPHIVGY 60
+G+G VSL T+ +G++ A K+ + P+ ++E L +L HI+ Y
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
KGC + L MEY P G+L D + R+ L + L+ + +QI +G+ YLH+
Sbjct: 99 KGC--CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQH 154
Query: 121 VVHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQ 172
+H D+ +RN+L+ + KI DFG AK E + G +P+F APE +
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKF 214
Query: 173 GFASDIWAVGCTVIEMAS 190
+ASD+W+ G T+ E+ +
Sbjct: 215 YYASDVWSFGVTLYELLT 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G++ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 20/198 (10%)
Query: 9 IGQGSSATVSL----ATSLRSGDVFAAKSTEL---PKSEF-LQREQKFLSSLNSPHIVGY 60
+G+G VSL T+ +G++ A K+ + P+ ++E L +L HI+ Y
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
KGC + L L MEY P G+L D + R+ L + L+ + +QI +G+ YLH+
Sbjct: 82 KGCCEDQGEKSL--QLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQH 137
Query: 121 VVHCDIKSRNILMA-ESGAKIADFGCAKWESE------ALQSGGTPMF-MAPEVARGEHQ 172
+H ++ +RN+L+ + KI DFG AK E + G +P+F APE +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF 197
Query: 173 GFASDIWAVGCTVIEMAS 190
+ASD+W+ G T+ E+ +
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 22/276 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKS-TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTS 67
+G+G+++ V + +A K + + ++ E L L+ P+I+ K T
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIK 127
+ +L +E GG L D I G E +QIL+ + YLH N +VH D+K
Sbjct: 121 TE----ISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 128 SRNILMA----ESGAKIADFGCAKW-ESEALQSG--GTPMFMAPEVARGEHQGFASDIWA 180
N+L A ++ KIADFG +K E + L GTP + APE+ RG G D+W+
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWS 235
Query: 181 VGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDPK 238
VG + G P+ + + +I P + +S A D + + DPK
Sbjct: 236 VGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPK 295
Query: 239 ERWAASQLLKHPFLE-------EFCSCTKQIQESNC 267
+R Q L+HP++ + K++QE N
Sbjct: 296 KRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNA 331
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 125/287 (43%), Gaps = 51/287 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGYKGC 63
IG+G+ V A + G+ FA K L K + RE L L +IV K
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV--KLY 66
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVH 123
DV +L+ L E+ L + G L+ S+ Q+L G+ Y H RV+H
Sbjct: 67 DVIHTKKRLV--LVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 124 CDIKSRNILMAESG-AKIADFGCA--------KWESEALQSGGTPMFMAPEVARGEHQGF 174
D+K +N+L+ G KIADFG A K+ E + T + AP+V G +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKYS 179
Query: 175 AS-DIWAVGCTVIEMASGGAPWPNA--ADPMTVLYKIAYS---------RELPEV-PAF- 220
+ DIW+VGC EM +G +P AD + +++I + ELP+ P F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 221 -------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
L + D LS L+ DP +R A Q L+H + +E
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG-GRLDESLIV 103
E++ L +NS +V + + K L + GG L I+ G E+ V
Sbjct: 234 EKQILEKVNSRFVVSL----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSG-GTP 159
Y +I GLE LH R+V+ D+K NIL+ + G +I+D G A E + ++ GT
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 160 MFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVP 218
+MAPEV + E F+ D WA+GC + EM +G +P+ + +E+P E
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 219 AFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEF 255
S QA S L +DP ER +A ++ +HP ++
Sbjct: 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 18/198 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
+G+GS V ++G A K L F E + L+SP IV G +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRVEELVACAGLSSPRIVPLYG----AV 133
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKS 128
N+FME GG+L I + G L E + Y Q L+GLEYLH+ R++H D+K+
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 129 RNILMAESGAKIA--DFG---CAKWE--SEALQSG----GTPMFMAPEVARGEHQGFASD 177
N+L++ G++ A DFG C + + ++L +G GT MAPEV G+ D
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 252
Query: 178 IWAVGCTVIEMASGGAPW 195
IW+ C ++ M +G PW
Sbjct: 253 IWSSCCMMLHMLNGCHPW 270
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG-GRLDESLIV 103
E++ L +NS +V + + K L + GG L I+ G E+ V
Sbjct: 234 EKQILEKVNSRFVVSL----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSG-GTP 159
Y +I GLE LH R+V+ D+K NIL+ + G +I+D G A E + ++ GT
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 160 MFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP-EVP 218
+MAPEV + E F+ D WA+GC + EM +G +P+ + +E+P E
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 219 AFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEF 255
S QA S L +DP ER +A ++ +HP ++
Sbjct: 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 26/261 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG GS + + FA K + K + + + L P+I+ K DV +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLK--DV-YD 86
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLD-ESLIVSYTRQILQGLEYLHSNRVVHCDIK 127
D K +Y + E GG L D+I R + E+ V +T I + +EYLH+ VVH D+K
Sbjct: 87 DGKYVY-VVTELMKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYLHAQGVVHRDLK 143
Query: 128 SRNILMA-ESG----AKIADFGCAKW---ESEALQSG-GTPMFMAPEVARGEHQGF--AS 176
NIL ESG +I DFG AK E+ L + T F+APEV E QG+ A
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL--ERQGYDAAC 201
Query: 177 DIWAVGCTVIEMASGGAPWPNAAD--PMTVLYKIAYSRELPEVPAF---LSKQANDFLSN 231
DIW++G + M +G P+ N D P +L +I S + + +S A D +S
Sbjct: 202 DIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG-SGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 232 CLRRDPKERWAASQLLKHPFL 252
L DP +R A+ +L+HP++
Sbjct: 261 MLHVDPHQRLTAALVLRHPWI 281
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 125/287 (43%), Gaps = 51/287 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGYKGC 63
IG+G+ V A + G+ FA K L K + RE L L +IV K
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV--KLY 66
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVH 123
DV +L+ L E+ L + G L+ S+ Q+L G+ Y H RV+H
Sbjct: 67 DVIHTKKRLV--LVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 124 CDIKSRNILMAESG-AKIADFGCA--------KWESEALQSGGTPMFMAPEVARGEHQGF 174
D+K +N+L+ G KIADFG A K+ E + T + AP+V G +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKYS 179
Query: 175 AS-DIWAVGCTVIEMASGGAPWPNA--ADPMTVLYKIAYS---------RELPEV-PAF- 220
+ DIW+VGC EM +G +P AD + +++I + ELP+ P F
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 221 -------------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
L + D LS L+ DP +R A Q L+H + +E
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E + LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 66 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 120
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 55/298 (18%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNSP 55
+ + IG+G+ TV A + + ++ A K L P S RE L L
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL--REICLLKELKHK 61
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+IV DV D KL L E+ L G LD ++ S+ Q+L+GL +
Sbjct: 62 NIVRLH--DVLHSDKKL--TLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAK--------WESEALQSGGTPMFMAPEV 166
HS V+H D+K +N+L+ +G K+A+FG A+ + +E + T + P+V
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----TLWYRPPDV 172
Query: 167 ARGEHQGFAS-DIWAVGCTVIEMASGGAP-WP--NAADPMTVLY---------------K 207
G S D+W+ GC E+A+ G P +P + D + ++ K
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 208 IAYSRELPEVPAF---------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC 256
+ + P PA L+ D L N L+ +P +R +A + L+HP+ +FC
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 171
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 231
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESN 266
I E P K D L CL+RDPK+R + +LL HP++ QIQ
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV--------QIQ--- 280
Query: 267 CSPTSILDQGIWNSVEETEESLGNLIHSTSKTS 299
P + + +G + EE + LG L+ S S
Sbjct: 281 THPVNQMAKG---TTEEMKYVLGQLVGLNSPNS 310
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 174
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 175 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 234
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESN 266
I E P K D L CL+RDPK+R + +LL HP++ QIQ
Sbjct: 235 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV--------QIQ--- 283
Query: 267 CSPTSILDQGIWNSVEETEESLGNLIHSTSKTS 299
P + + +G + EE + LG L+ S S
Sbjct: 284 THPVNQMAKG---TTEEMKYVLGQLVGLNSPNS 313
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V + +G +AAK K + L+RE + L P+IV +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIV--RLH 69
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D SE+ + L + GG L ++I D S + +QIL+ + + H N +
Sbjct: 70 DSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQILESVNHCHLNGI 124
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCA---KWESEA-LQSGGTPMFMAPEVARGEHQG 173
VH D+K N+L+A + K+ADFG A + + +A GTP +++PEV R + G
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFLS 230
D+WA G + + G P+ + D + +I AY PE ++ +A D ++
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLIN 242
Query: 231 NCLRRDPKERWAASQLLKHPFL 252
L +P +R AS+ LKHP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESN 266
I E P K D L CL+RDPK+R + +LL HP++ QIQ
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV--------QIQ--- 327
Query: 267 CSPTSILDQGIWNSVEETEESLGNLIHSTSKTS 299
T ++Q + EE + LG L+ S S
Sbjct: 328 ---THPVNQMAKGTTEEMKYVLGQLVGLNSPNS 357
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V + +G +AAK K + L+RE + L P+IV +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIV--RLH 69
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D SE+ + L + GG L ++I D S + +QIL+ + + H N +
Sbjct: 70 DSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQILESVNHCHLNGI 124
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCA---KWESEA-LQSGGTPMFMAPEVARGEHQG 173
VH D+K N+L+A + K+ADFG A + + +A GTP +++PEV R + G
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFLS 230
D+WA G + + G P+ + D + +I AY PE ++ +A D ++
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLIN 242
Query: 231 NCLRRDPKERWAASQLLKHPFL 252
L +P +R AS+ LKHP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 55/298 (18%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNSP 55
+ + IG+G+ TV A + + ++ A K L P S RE L L
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL--REICLLKELKHK 61
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+IV DV D KL L E+ L G LD ++ S+ Q+L+GL +
Sbjct: 62 NIVRLH--DVLHSDKKL--TLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFGCAK--------WESEALQSGGTPMFMAPEV 166
HS V+H D+K +N+L+ +G K+ADFG A+ + +E + T + P+V
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDV 172
Query: 167 ARGEHQGFAS-DIWAVGCTVIEMASGGAP-WP--NAADPMTVLY---------------K 207
G S D+W+ GC E+A+ P +P + D + ++ K
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 208 IAYSRELPEVPAF---------LSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC 256
+ + P PA L+ D L N L+ +P +R +A + L+HP+ +FC
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 48/293 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAA------KSTE--LPKSEFLQREQKFLSSLNS---PHI 57
IG+G+ V A L++G F A ++ E +P S RE L L + P++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNV 76
Query: 58 VG-YKGCDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
V + C V+ D + L E+ T D++ G + I Q+L+GL+
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLD 134
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWES--EALQSGGTPM-FMAPEVARGE 170
+LHS+RVVH D+K +NIL+ SG K+ADFG A+ S AL S + + APEV
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 171 HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP---------EVP--A 219
D+W+VGC EM + ++D + L KI LP +P A
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 220 FLSKQA--------------NDFLSNCLRRDPKERWAASQLLKHPFLEEFCSC 258
F SK A D L CL +P +R +A L HP+ ++ C
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 52/295 (17%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNSP 55
+ + +G+G+ V A G + A K L P + RE L L+ P
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI--REISLLKELHHP 79
Query: 56 HIVGYKGCDVTSEDNKLMYNL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
+IV DV + L FME L + N L +S I Y Q+L+G+
Sbjct: 80 NIVSL--IDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ H +R++H D+K +N+L+ GA K+ADFG A+ ++S T + AP+V G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWPNAA--DPMTVLYKIAYS---RELPEV------ 217
+ S DIW++GC EM +G +P D + ++ I + RE P+V
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 218 -----------------PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
P F ++ D LSN L DP +R +A + HP+ ++
Sbjct: 254 KQRTFQVFEKKPWSSIIPGF-CQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFL--------SSLNSPHIVGY 60
+G+G+ V + SG + A K ++ +EQK L +++ P V +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR----NGGRLDESLIVSYTRQILQGLEYL 116
G D + L T D+ ++ G + E ++ I++ LE+L
Sbjct: 116 YGALFREGDVWICMELM------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 117 HSN-RVVHCDIKSRNILMAESG-AKIADFGCAKW----ESEALQSGGTPMFMAPEVARGE 170
HS V+H D+K N+L+ G K+ DFG + + ++ + +G P +MAPE E
Sbjct: 170 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP-YMAPERINPE 228
Query: 171 --HQGFA--SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPA-FLSKQA 225
+G++ SDIW++G T+IE+A P+ + P L ++ P++PA S +
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV-EEPSPQLPADKFSAEF 287
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFL 252
DF S CL+++ KER +L++HPF
Sbjct: 288 VDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL--PKSEFLQ---REQKFLSSLNSPHIV 58
T G IG GS TV GDV A K + P + LQ E L +I+
Sbjct: 38 TVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 95 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 269
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 270 KRLMAECLKKKRDERPLFPQIL 291
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 52/295 (17%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-------PKSEFLQREQKFLSSLNSP 55
+ + +G+G+ V A G + A K L P + RE L L+ P
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI--REISLLKELHHP 79
Query: 56 HIVGYKGCDVTSEDNKLMYNL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
+IV DV + L FME L + N L +S I Y Q+L+G+
Sbjct: 80 NIVSL--IDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 115 YLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG----TPMFMAPEVARG 169
+ H +R++H D+K +N+L+ GA K+ADFG A+ ++S T + AP+V G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWPNAA--DPMTVLYKIAYS---RELPEV------ 217
+ S DIW++GC EM +G +P D + ++ I + RE P+V
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 218 -----------------PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
P F ++ D LSN L DP +R +A + HP+ ++
Sbjct: 254 KQRTFQVFEKKPWSSIIPGF-CQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 170
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 171 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 230
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESN 266
I E P K D L CL+RDPK+R + +LL HP++ QIQ
Sbjct: 231 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV--------QIQ--- 279
Query: 267 CSPTSILDQGIWNSVEETEESLGNLI 292
P + + +G + EE + LG L+
Sbjct: 280 THPVNQMAKG---TTEEMKYVLGQLV 302
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL--PKSEFLQ---REQKFLSSLNSPHIV 58
T G IG GS TV GDV A K + P + LQ E L +I+
Sbjct: 39 TVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 96 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 32/281 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V + +G +AAK K + L+RE + L P+IV +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIV--RLH 87
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D SE+ + L + GG L ++I D S + +QIL+ + + H V
Sbjct: 88 DSISEEGH--HYLIFDLVTGGELFEDIVAREYYSEADASHCI---QQILEAVLHCHQMGV 142
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKWESEALQSG-----GTPMFMAPEVARGEHQ 172
VH D+K N+L+A + K+ADFG A E E Q GTP +++PEV R +
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
G D+WA G + + G P+ + D + +I AY PE ++ +A D +
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLI 259
Query: 230 SNCLRRDPKERWAASQLLKHPFLEE---FCSCTKQIQESNC 267
+ L +P +R A++ LKHP++ SC + + +C
Sbjct: 260 NKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDC 300
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 147/326 (45%), Gaps = 50/326 (15%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPK---SEFLQREQKFLSSLNSP 55
D+ IG+G+ V L S V+A K E+ K S F E+ ++ NSP
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+V C +D+K +Y + MEY PGG L + + + + E YT +++ L+
Sbjct: 136 WVVQL-FC--AFQDDKYLY-MVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDA 189
Query: 116 LHSNRVVHCDIKSRNILMAESG-AKIADFG-CAKWESEAL----QSGGTPMFMAPEVARG 169
+HS ++H D+K N+L+ + G K+ADFG C K + + + GTP +++PEV +
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 170 E----HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY-KIAYSRE---LPEVPAFL 221
+ + G D W+VG + EM G P+ AD + Y KI + PE A +
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPF--YADSLVGTYSKIMDHKNSLCFPE-DAEI 306
Query: 222 SKQANDFLSNCL--RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWN 279
SK A + + L R R ++ +HPF + DQ W+
Sbjct: 307 SKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN-------------------DQWNWD 347
Query: 280 SVEETEESLGNLIHSTSKTSARERIE 305
++ ET + + S +S + IE
Sbjct: 348 NIRETAAPVVPELSSDIDSSNFDDIE 373
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 69
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 70 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 245 KRLMAECLKKKRDERPLFPQIL 266
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 87
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 88 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCA----KWES--EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +W + Q G+ ++MAPEV R +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 263 KRLMAECLKKKRDERPLFPQIL 284
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 73 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 67 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 121
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R +G G+ V L +G A K T S L E L L+ P+
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLE 114
I+ ++K Y L ME GG L DEI + +D ++I+ +Q+L G
Sbjct: 66 IMKL----YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQVLSGTT 118
Query: 115 YLHSNRVVHCDIKSRNILMA----ESGAKIADFGC-AKWE--SEALQSGGTPMFMAPEVA 167
YLH + +VH D+K N+L+ ++ KI DFG A +E + + GT ++APEV
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADP--MTVLYKIAYSRELPEVPAFLSKQA 225
R ++ D+W+ G + + G P+ D + + K +S + P+ +S +A
Sbjct: 179 RKKYDE-KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ-VSDEA 236
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
+ L +P +R +A + L HP++ +FCS
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCS 268
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHI 57
DW T+G+G+ V LA + + + A K ++ ++ E +++E LN ++
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + G + + Y LF+EY GG L D I + G + E + Q++ G+ YLH
Sbjct: 68 VKFYG---HRREGNIQY-LFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH 122
Query: 118 SNRVVHCDIKSRNILMAE-SGAKIADFGCA------KWESEALQSGGTPMFMAPE-VARG 169
+ H DIK N+L+ E KI+DFG A E + GT ++APE + R
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAAD 200
E D+W+ G + M +G PW +D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 67
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G + + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 68 LFMGYSTAPQ-----LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 67
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 68 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 73 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 67
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 68 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCA----KWES--EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +W + Q G+ ++MAPEV R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 95
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + ++ RQ QG++YLH+
Sbjct: 96 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCA----KWES--EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +W + Q G+ ++MAPEV R +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFLSKQA 225
+ F SD++A G + E+ +G P+ N + +++ + S +L +V + K
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER Q+L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 26/272 (9%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAK------STELPKSEFLQREQKFLSSLNSPH 56
+ R +G G+ V L +G A K T S L E L L+ P+
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLE 114
I+ ++K Y L ME GG L DEI + +D ++I+ +Q+L G
Sbjct: 83 IMKL----YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQVLSGTT 135
Query: 115 YLHSNRVVHCDIKSRNILMA----ESGAKIADFGC-AKWE--SEALQSGGTPMFMAPEVA 167
YLH + +VH D+K N+L+ ++ KI DFG A +E + + GT ++APEV
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQA 225
R ++ D+W+ G + + G P+ D +L ++ + + P + +S +A
Sbjct: 196 RKKYDE-KCDVWSCGVILYILLCGYPPFGGQTD-QEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFLEEFCS 257
+ L +P +R +A + L HP++ +FCS
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCS 285
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFL--------SSLNSPHIVGY 60
+G+G+ V + SG + A K ++ +EQK L +++ P V +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN----GGRLDESLIVSYTRQILQGLEYL 116
G D + L T D+ ++ G + E ++ I++ LE+L
Sbjct: 72 YGALFREGDVWICMELM------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 117 HSN-RVVHCDIKSRNILMAESG-AKIADFGCAKW----ESEALQSGGTPMFMAPEVARGE 170
HS V+H D+K N+L+ G K+ DFG + + ++ + +G P +MAPE E
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP-YMAPERINPE 184
Query: 171 --HQGFA--SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPA-FLSKQA 225
+G++ SDIW++G T+IE+A P+ + P L ++ P++PA S +
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV-EEPSPQLPADKFSAEF 243
Query: 226 NDFLSNCLRRDPKERWAASQLLKHPFL 252
DF S CL+++ KER +L++HPF
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 190
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
I E P K D L CL+RDPK+R + +LL HP+++
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
I E P K D L CL+RDPK+R + +LL HP+++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTEL------PKS-----EFLQREQKFLSSL-NSP 55
IG+G S+ V +G FA K E+ P+ E +RE L + P
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
HI+ + E + M+ +F + G L D + L E S R +L+ + +
Sbjct: 161 HIITLID---SYESSSFMFLVF-DLMRKGELFDYLTEKVA-LSEKETRSIMRSLLEAVSF 215
Query: 116 LHSNRVVHCDIKSRNILMAES-GAKIADFG--CAKWESEALQS-GGTPMFMAPEVAR--- 168
LH+N +VH D+K NIL+ ++ +++DFG C E L+ GTP ++APE+ +
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 169 -GEHQGFAS--DIWAVGCTVIEMASGGAPWPNAADPMTV--LYKIAYSRELPEVPAFLSK 223
H G+ D+WA G + + +G P+ + + + + + Y PE S
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD-RSS 334
Query: 224 QANDFLSNCLRRDPKERWAASQLLKHPFLE 253
D +S L+ DP+ R A Q L+HPF E
Sbjct: 335 TVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 76 LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA- 134
+ E+ G + + I+ + L+E IVSY Q+ + L++LHS+ + H DI+ NI+
Sbjct: 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137
Query: 135 --ESGAKIADFGCAKWESEALQSGG-------TPMFMAPEVARGEHQGFASDIWAVGCTV 185
S KI +FG A+ L+ G P + APEV + + A+D+W++G V
Sbjct: 138 RRSSTIKIIEFGQAR----QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
Query: 186 IEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCLRRDPKERWAA 243
+ SG P+ A ++ I + + AF +S +A DF+ L ++ K R A
Sbjct: 194 YVLLSGINPFL-AETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
Query: 244 SQLLKHPFLEE 254
S+ L+HP+L++
Sbjct: 253 SEALQHPWLKQ 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ--------REQKFLSSLNSPHIVG 59
+GQGS V L + D + ++ K L+ E+ L +N P IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
T + KL L +++ GG L + + +E + Y ++ L++LHS
Sbjct: 91 LHYAFQT--EGKLY--LILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALDHLHSL 145
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVA--RGEHQ 172
+++ D+K NIL+ E G K+ DFG +K E +A GT +MAPEV RG Q
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 173 GFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
++D W+ G + EM +G P+ + + MT++ K +P FLS +A L
Sbjct: 206 --SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQSLLR 258
Query: 231 NCLRRDPKERWAA 243
+R+P R A
Sbjct: 259 MLFKRNPANRLGA 271
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 26/261 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSE 68
IG GS + + FA K + K + + + L P+I+ K DV +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLK--DV-YD 86
Query: 69 DNKLMYNLFMEYAPGGTLNDEIHRNGGRLD-ESLIVSYTRQILQGLEYLHSNRVVHCDIK 127
D K +Y + E GG L D+I R + E+ V +T I + +EYLH+ VVH D+K
Sbjct: 87 DGKYVY-VVTELXKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYLHAQGVVHRDLK 143
Query: 128 SRNILMA-ESG----AKIADFGCAKW---ESEALQSG-GTPMFMAPEVARGEHQGF--AS 176
NIL ESG +I DFG AK E+ L + T F+APEV E QG+ A
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL--ERQGYDAAC 201
Query: 177 DIWAVGCTVIEMASGGAPWPNAAD--PMTVLYKIAYSRELPEVPAF---LSKQANDFLSN 231
DIW++G + +G P+ N D P +L +I S + + +S A D +S
Sbjct: 202 DIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIG-SGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 232 CLRRDPKERWAASQLLKHPFL 252
L DP +R A+ +L+HP++
Sbjct: 261 XLHVDPHQRLTAALVLRHPWI 281
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ--------REQKFLSSLNSPHIVG 59
+GQGS V L + D + ++ K L+ E+ L +N P IV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
T + KL L +++ GG L + + +E + Y ++ L++LHS
Sbjct: 92 LHYAFQT--EGKLY--LILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALDHLHSL 146
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVA--RGEHQ 172
+++ D+K NIL+ E G K+ DFG +K E +A GT +MAPEV RG Q
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 173 GFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
++D W+ G + EM +G P+ + + MT++ K +P FLS +A L
Sbjct: 207 --SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQSLLR 259
Query: 231 NCLRRDPKERWAA 243
+R+P R A
Sbjct: 260 MLFKRNPANRLGA 272
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 38/278 (13%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
MD+ IG G V A G + + + +E +RE K L+ L+ +IV Y
Sbjct: 12 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKY-NNEKAEREVKALAKLDHVNIVHY 70
Query: 61 KGC------DVTSEDNKLM---YN--------------LF--MEYAPGGTLNDEIH-RNG 94
GC D + D+ L Y+ LF ME+ GTL I R G
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWES 150
+LD+ L + QI +G++Y+HS +++H D+K NI + ++ KI DFG K +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 151 EALQSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAY 210
+ +S GT +M+PE + G D++A+G + E+ + D K
Sbjct: 191 KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------HVCDTAFETSKFFT 243
Query: 211 SRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ K+ L L + P++R S++L+
Sbjct: 244 DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 125/296 (42%), Gaps = 52/296 (17%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKG 62
+T IG GS V A + S +V K L F RE + + + P++V K
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV--LQDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 63 CDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDES----LIVSYTRQILQGLEYL 116
++ D K + NL +EY P R+ +L ++ LI Y Q+L+ L Y+
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRAS--RHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 117 HSNRVVHCDIKSRNILM-AESGA-KIADFGCAKWESEALQSGGTP--------MFMAPEV 166
HS + H DIK +N+L+ SG K+ DFG AK + G P + APE+
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK-----ILIAGEPNVSXICSRYYRAPEL 212
Query: 167 ARGEHQGFAS-DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKI--AYSRE-------- 213
G + DIW+ GC + E+ G +P + D + + K+ SRE
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN 272
Query: 214 -----LPEV-PAFLSK--------QANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
P++ P SK A D +S L P R A + L HPF +E
Sbjct: 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
MD+ IG G V A G + K + +E +RE K L+ L+ +IV Y
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY-NNEKAEREVKALAKLDHVNIVHY 69
Query: 61 KGC-------------DVTSEDNKLMYNLFMEYAPGGTLNDEIH-RNGGRLDESLIVSYT 106
GC + + K ++ + ME+ GTL I R G +LD+ L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLF-IQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 107 RQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTPMFM 162
QI +G++Y+HS ++++ D+K NI + ++ KI DFG K + + +S GT +M
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 163 APEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLS 222
+PE + G D++A+G + E+ + D K +
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL-------HVCDTAFETSKFFTDLRDGIISDIFD 241
Query: 223 KQANDFLSNCLRRDPKERWAASQLLK 248
K+ L L + P++R S++L+
Sbjct: 242 KKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPK---SEFLQREQKFLSSLNSP 55
D+ IG+G+ V L + V+A K E+ K S F E+ ++ NSP
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTL-----NDEIHRNGGRLDESLIVSYTRQIL 110
+V +D++ +Y + MEY PGG L N ++ R YT +++
Sbjct: 130 WVVQ---LFYAFQDDRYLY-MVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVV 178
Query: 111 QGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFG-CAKWESEAL----QSGGTPMFMAP 164
L+ +HS +H D+K N+L+ +SG K+ADFG C K E + + GTP +++P
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 165 EVARGE----HQGFASDIWAVGCTVIEMASGGAPW 195
EV + + + G D W+VG + EM G P+
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSG------G 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A S G
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
+M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESN 266
I E P K D L CL+RDPK+R + +LL HP++ QIQ
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV--------QIQ--- 327
Query: 267 CSPTSILDQGIWNSVEETEESLGNLIHSTSKTS 299
T ++Q + EE + LG L+ S S
Sbjct: 328 ---THPVNQMAKGTTEEMKYVLGQLVGLNSPNS 357
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 17/223 (7%)
Query: 40 EFLQREQKFLSSLNSPHIVGYKGCDVTSEDNK-LMYNLFMEYAPGGTLNDEIHRNGGRLD 98
E + +E L L+ P++V K +V + N+ +Y +F G + + L
Sbjct: 81 EQVYQEIAILKKLDHPNVV--KLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LS 135
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK--WESEALQS 155
E Y + +++G+EYLH +++H DIK N+L+ E G KIADFG + S+AL S
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS 195
Query: 156 G--GTPMFMAPEV---ARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI-A 209
GTP FMAPE R G A D+WA+G T+ G P+ + M + KI +
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER-IMCLHSKIKS 254
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
+ E P+ P +++ D ++ L ++P+ R ++ HP++
Sbjct: 255 QALEFPDQPD-IAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ--------REQKFLSSLNSPHIVG 59
+GQGS V L + D + ++ K L+ E+ L +N P IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
T + KL L +++ GG L + + +E + Y ++ L++LHS
Sbjct: 91 LHYAFQT--EGKLY--LILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALDHLHSL 145
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAK----WESEALQSGGTPMFMAPEVA--RGEHQ 172
+++ D+K NIL+ E G K+ DFG +K E +A GT +MAPEV RG Q
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 173 GFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
++D W+ G + EM +G P+ + + MT++ K +P FLS +A L
Sbjct: 206 --SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQSLLR 258
Query: 231 NCLRRDPKERWAA 243
+R+P R A
Sbjct: 259 MLFKRNPANRLGA 271
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 25/265 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGYKGC 63
+G G+ V ++G V A K ++ L L S + P+IV G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIH-RNGGRLDESLIVSYTRQILQGLEYLHSNR-V 121
+T+ D +F+ GT +++ R G + E ++ T I++ L YL V
Sbjct: 93 FITNTD------VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 122 VHCDIKSRNILMAESGA-KIADFGCAKW---ESEALQSGGTPMFMAPEV-----ARGEHQ 172
+H D+K NIL+ E G K+ DFG + + +S G +MAPE
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFL--SKQANDFLS 230
+D+W++G +++E+A+G P+ N VL K+ E P +P + S F+
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQSFVK 265
Query: 231 NCLRRDPKERWAASQLLKHPFLEEF 255
+CL +D ++R ++LL+H F++ +
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFIKRY 290
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR----NGGRLDES 100
E+K L+ ++S IV T D L M GG + I+ N G E
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPG-FQEP 289
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS---- 155
+ YT QI+ GLE+LH +++ D+K N+L+ + G +I+D G A E +A Q+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV-ELKAGQTKTKG 348
Query: 156 -GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL 214
GTP FMAPE+ GE F+ D +A+G T+ EM + P+ + V K R L
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVL 406
Query: 215 PEV---PAFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEFCSCTKQIQESN 266
+ P S + DF L++DP++R + L HP + +Q++
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI--SWRQLEAGM 464
Query: 267 CSPTSILD 274
+P + D
Sbjct: 465 LTPPFVPD 472
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR----NGGRLDES 100
E+K L+ ++S IV T D L M GG + I+ N G E
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPG-FQEP 289
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS---- 155
+ YT QI+ GLE+LH +++ D+K N+L+ + G +I+D G A E +A Q+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV-ELKAGQTKTKG 348
Query: 156 -GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL 214
GTP FMAPE+ GE F+ D +A+G T+ EM + P+ + V K R L
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVL 406
Query: 215 PEV---PAFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEFCSCTKQIQESN 266
+ P S + DF L++DP++R + L HP + +Q++
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI--SWRQLEAGM 464
Query: 267 CSPTSILD 274
+P + D
Sbjct: 465 LTPPFVPD 472
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR----NGGRLDES 100
E+K L+ ++S IV T D L M GG + I+ N G E
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPG-FQEP 289
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS---- 155
+ YT QI+ GLE+LH +++ D+K N+L+ + G +I+D G A E +A Q+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV-ELKAGQTKTKG 348
Query: 156 -GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL 214
GTP FMAPE+ GE F+ D +A+G T+ EM + P+ + V K R L
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVL 406
Query: 215 PEV---PAFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEFCSCTKQIQESN 266
+ P S + DF L++DP++R + L HP + +Q++
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI--SWRQLEAGM 464
Query: 267 CSPTSILD 274
+P + D
Sbjct: 465 LTPPFVPD 472
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPK---SEFLQREQKFLSSLNSP 55
D+ IG+G+ V L + V+A K E+ K S F E+ ++ NSP
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTL-----NDEIHRNGGRLDESLIVSYTRQIL 110
+V +D++ +Y + MEY PGG L N ++ R YT +++
Sbjct: 135 WVVQ---LFYAFQDDRYLY-MVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVV 183
Query: 111 QGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFG-CAKWESEAL----QSGGTPMFMAP 164
L+ +HS +H D+K N+L+ +SG K+ADFG C K E + + GTP +++P
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 165 EVARGE----HQGFASDIWAVGCTVIEMASGGAPW 195
EV + + + G D W+VG + EM G P+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAK---STELPK---SEFLQREQKFLSSLNSP 55
D+ IG+G+ V L + V+A K E+ K S F E+ ++ NSP
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTL-----NDEIHRNGGRLDESLIVSYTRQIL 110
+V +D++ +Y + MEY PGG L N ++ R YT +++
Sbjct: 135 WVVQ---LFYAFQDDRYLY-MVMEYMPGGDLVNLMSNYDVPEKWARF-------YTAEVV 183
Query: 111 QGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFG-CAKWESEAL----QSGGTPMFMAP 164
L+ +HS +H D+K N+L+ +SG K+ADFG C K E + + GTP +++P
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 165 EVARGE----HQGFASDIWAVGCTVIEMASGGAPW 195
EV + + + G D W+VG + EM G P+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTS 67
TIG GS + + +A K + K + + + L P+I+ K DV
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK--DVY- 90
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD-ESLIVSYTRQILQGLEYLHSNRVVHCDI 126
+D K +Y L E GG L D+I R + E+ V +T I + +EYLHS VVH D+
Sbjct: 91 DDGKHVY-LVTELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYLHSQGVVHRDL 147
Query: 127 KSRNILMA-ESG----AKIADFGCAKW---ESEALQSG-GTPMFMAPEVARGEHQGFASD 177
K NIL ESG +I DFG AK E+ L + T F+APEV + + D
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 178 IWAVGCTVIEMASGGAPWPNAAD--PMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCL 233
IW++G + M +G P+ N P +L +I + + +S+ A D +S L
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
Query: 234 RRDPKERWAASQLLKHPFLEE 254
DP +R A Q+L+HP++ +
Sbjct: 268 HVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTS 67
TIG GS + + +A K + K + + + L P+I+ K DV
Sbjct: 34 TIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK--DV-Y 90
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD-ESLIVSYTRQILQGLEYLHSNRVVHCDI 126
+D K +Y L E GG L D+I R + E+ V +T I + +EYLHS VVH D+
Sbjct: 91 DDGKHVY-LVTELMRGGELLDKILRQKFFSEREASFVLHT--IGKTVEYLHSQGVVHRDL 147
Query: 127 KSRNILMA-ESG----AKIADFGCAKW---ESEALQSG-GTPMFMAPEVARGEHQGFASD 177
K NIL ESG +I DFG AK E+ L + T F+APEV + + D
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 178 IWAVGCTVIEMASGGAPWPNAAD--PMTVLYKIAYSRELPEVPAF--LSKQANDFLSNCL 233
IW++G + M +G P+ N P +L +I + + +S+ A D +S L
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
Query: 234 RRDPKERWAASQLLKHPFLEE 254
DP +R A Q+L+HP++ +
Sbjct: 268 HVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 15 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 71
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + + ++ RQ +G++YLH+
Sbjct: 72 LFMGYS-----TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWES------EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +S + Q G+ ++MAPEV R +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQA 225
F SD++A G + E+ +G P+ N + ++ + + S +L +V + K+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER + ++L
Sbjct: 247 KRLMAECLKKKRDERPSFPRIL 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V +G FAAK + +L +F L+RE + L P+IV +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV--RLH 71
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D E++ + L + GG L ++I D S + +QIL+ + Y HSN +
Sbjct: 72 DSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIAYCHSNGI 126
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKW--ESEALQS-GGTPMFMAPEVARGEHQGF 174
VH ++K N+L+A + K+ADFG A +SEA GTP +++PEV + +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 175 ASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-AYSRELPEVPAFLSKQANDFLSNC 232
DIWA G + + G P W + K AY PE ++ +A + +
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSM 245
Query: 233 LRRDPKERWAASQLLKHPFL 252
L +PK+R A Q LK P++
Sbjct: 246 LTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V +G FAAK + +L +F L+RE + L P+IV +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV--RLH 70
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D E++ + L + GG L ++I D S + +QIL+ + Y HSN +
Sbjct: 71 DSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIAYCHSNGI 125
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKW--ESEALQS-GGTPMFMAPEVARGEHQGF 174
VH ++K N+L+A + K+ADFG A +SEA GTP +++PEV + +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 175 ASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-AYSRELPEVPAFLSKQANDFLSNC 232
DIWA G + + G P W + K AY PE ++ +A + +
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSM 244
Query: 233 LRRDPKERWAASQLLKHPFL 252
L +PK+R A Q LK P++
Sbjct: 245 LTVNPKKRITADQALKVPWI 264
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQ------SGG 157
SY + +L+ + +H + +VH D+K N L+ + K+ DFG A G
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVG 190
Query: 158 TPMFMAPEVARG-----------EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
T +M PE + SD+W++GC + M G P+ + ++ L+
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250
Query: 207 KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
I E P K D L CL+RDPK+R + +LL HP+++
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR----NGGRLDES 100
E+K L+ ++S IV T D L M GG + I+ N G E
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPG-FQEP 289
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS---- 155
+ YT QI+ GLE+LH +++ D+K N+L+ + G +I+D G A E +A Q+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV-ELKAGQTKTKG 348
Query: 156 -GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL 214
GTP FMAPE+ GE F+ D +A+G T+ EM + P+ + V K R L
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE--KVENKELKQRVL 406
Query: 215 PEV---PAFLSKQANDFLSNCLRRDPKERW-----AASQLLKHPFLEEFCSCTKQIQESN 266
+ P S + DF L++DP++R + L HP + +Q++
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI--SWRQLEAGM 464
Query: 267 CSPTSILD 274
+P + D
Sbjct: 465 LTPPFVPD 472
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V +G FAAK + +L +F L+RE + L P+IV +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV--RLH 71
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D E++ + L + GG L ++I D S + +QIL+ + Y HSN +
Sbjct: 72 DSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIAYCHSNGI 126
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKW--ESEALQS-GGTPMFMAPEVARGEHQGF 174
VH ++K N+L+A + K+ADFG A +SEA GTP +++PEV + +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 175 ASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-AYSRELPEVPAFLSKQANDFLSNC 232
DIWA G + + G P W + K AY PE ++ +A + +
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSM 245
Query: 233 LRRDPKERWAASQLLKHPFL 252
L +PK+R A Q LK P++
Sbjct: 246 LTVNPKKRITADQALKVPWI 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 83
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G K + ++ G +L +H + + + ++ RQ +G++YLH+
Sbjct: 84 LFMGYST-----KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCA----KWES--EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +W + Q G+ ++MAPEV R +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQA 225
F SD++A G + E+ +G P+ N + ++ + + S +L +V + K+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER + ++L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 129/288 (44%), Gaps = 48/288 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAA------KSTE--LPKSEFLQREQKFLSSLNS---PHI 57
IG+G+ V A L++G F A ++ E +P S RE L L + P++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNV 76
Query: 58 VG-YKGCDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
V + C V+ D + L E+ T D++ G + I Q+L+GL+
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLD 134
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWES--EALQSGGTPM-FMAPEVARGE 170
+LHS+RVVH D+K +NIL+ SG K+ADFG A+ S AL S + + APEV
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 171 HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP---------EVP--A 219
D+W+VGC EM + ++D + L KI LP +P A
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQA 253
Query: 220 FLSKQA--------------NDFLSNCLRRDPKERWAASQLLKHPFLE 253
F SK A D L CL +P +R +A L HP+ +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
Query: 4 TRGHTIGQGSSATVSLA-----TSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIV 58
T G IG GS TV +++ +V A +L + + E L +I+
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNIL 83
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
+ G + + ++ G +L +H + + + ++ RQ +G++YLH+
Sbjct: 84 LFMGYSTAPQ-----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCA----KWES--EALQSGGTPMFMAPEVARGEH 171
++H D+KS NI + E KI DFG A +W + Q G+ ++MAPEV R +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 172 QG---FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQA 225
F SD++A G + E+ +G P+ N + ++ + + S +L +V + K+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 226 NDFLSNCLRRDPKERWAASQLL 247
++ CL++ ER + ++L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK---STELPKSEF--LQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V +G FAAK + +L +F L+RE + L P+IV +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV--RLH 94
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D E++ + L + GG L ++I D S + +QIL+ + Y HSN +
Sbjct: 95 DSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESIAYCHSNGI 149
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKW--ESEALQS-GGTPMFMAPEVARGEHQGF 174
VH ++K N+L+A + K+ADFG A +SEA GTP +++PEV + +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 175 ASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-AYSRELPEVPAFLSKQANDFLSNC 232
DIWA G + + G P W + K AY PE ++ +A + +
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSM 268
Query: 233 LRRDPKERWAASQLLKHPFL 252
L +PK+R A Q LK P++
Sbjct: 269 LTVNPKKRITADQALKVPWI 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 27/269 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPH 56
D+ +G+G+ + V +AAK K + L+RE + L P+
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLE 114
IV + D SE+ + L + GG L ++I D S + QIL+ +
Sbjct: 92 IV--RLHDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCI---HQILESVN 144
Query: 115 YLHSNRVVHCDIKSRNILMAE----SGAKIADFGCA---KWESEA-LQSGGTPMFMAPEV 166
++H + +VH D+K N+L+A + K+ADFG A + E +A GTP +++PEV
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSK 223
R + G DIWA G + + G P+ + D + +I AY PE ++
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDT-VTP 262
Query: 224 QANDFLSNCLRRDPKERWAASQLLKHPFL 252
+A + ++ L +P +R A Q LKHP++
Sbjct: 263 EAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 53/294 (18%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ----REQKFLSSLNSPHIVGYKGCD 64
+G G+ ATV + +G A K +L E RE + L +IV + D
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV--RLYD 70
Query: 65 VTSEDNKLMYNL-FMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVV 122
V +NKL FM+ ++ N R L+ +L+ + Q+LQGL + H N+++
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 123 HCDIKSRNILMAESGA-KIADFGCAK--------WESEALQSGGTPMFMAPEVARGEHQG 173
H D+K +N+L+ + G K+ DFG A+ + SE + T + AP+V G
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV----TLWYRAPDVLMGSRTY 186
Query: 174 FAS-DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIAYS------------------- 211
S DIW+ GC + EM +G +P N + + +++ I +
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI 246
Query: 212 -----REL-----PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
R+L P L DFL L+ +P R +A Q L HP+ E+
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 9 IGQGSSATVSLATSLRSGDVFAA-----KSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
+G+G+ + V + +G +AA K + L+RE + L P+IV +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIV--RLH 76
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D SE+ + L + GG L ++I D S + +QIL+ + + H V
Sbjct: 77 DSISEEGH--HYLIFDLVTGGELFEDIVAREYYSEADASHCI---QQILEAVLHCHQMGV 131
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCAKWESEALQSG-----GTPMFMAPEVARGEHQ 172
VH ++K N+L+A + K+ADFG A E E Q GTP +++PEV R +
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAI-EVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFL 229
G D+WA G + + G P+ + D + +I AY PE ++ +A D +
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDT-VTPEAKDLI 248
Query: 230 SNCLRRDPKERWAASQLLKHPFLEE---FCSCTKQIQESNC 267
+ L +P +R A++ LKHP++ SC + + +C
Sbjct: 249 NKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDC 289
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 17/242 (7%)
Query: 40 EFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDE 99
E + E L SL+ P+I+ K DV ED K Y L E+ GG L ++I N + DE
Sbjct: 91 EEIYNEISLLKSLDHPNII--KLFDVF-EDKKYFY-LVTEFYEGGELFEQI-INRHKFDE 145
Query: 100 SLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA----KIADFGCAKWESEALQ- 154
+ +QIL G+ YLH + +VH DIK NIL+ + KI DFG + + S+ +
Sbjct: 146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 155 --SGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAY 210
GT ++APEV + ++ D+W+ G + + G P+ N D + + K Y
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNE-KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 211 SRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC-SCTKQIQESNCSP 269
+ + +S +A + + L D +R A + L +++++ + K Q++ C
Sbjct: 265 YFDFNDWKN-ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGA 323
Query: 270 TS 271
S
Sbjct: 324 LS 325
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 76 LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAE 135
+ ++ G +L +H + ++ RQ QG++YLH+ ++H D+KS NI + E
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE 167
Query: 136 S-GAKIADFGCAKWES------EALQSGGTPMFMAPEVARGEHQG---FASDIWAVGCTV 185
KI DFG A +S + Q G+ ++MAPEV R + F SD+++ G +
Sbjct: 168 GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227
Query: 186 IEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLS---KQANDFLSNCLRRDPKERWA 242
E+ +G P+ + + +++ + P++ K +++C+++ +ER
Sbjct: 228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPL 287
Query: 243 ASQLL 247
Q+L
Sbjct: 288 FPQIL 292
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKG 62
+ R +G GS V S G ++A K + P R +K L+ + S VG
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK-LAEVGSHEKVGQHP 117
Query: 63 CDVTSE----DNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
C V E + ++Y L E G +L G L E+ + Y R L L +LHS
Sbjct: 118 CCVRLEQAWEEGGILY-LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG----GTPMFMAPEVARGEHQG 173
+VH D+K NI + G K+ DFG E +G G P +MAPE+ +G + G
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLV-ELGTAGAGEVQEGDPRYMAPELLQGSY-G 233
Query: 174 FASDIWAVGCTVIEMA------SGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
A+D++++G T++E+A GG W ++ PE A LS +
Sbjct: 234 TAADVFSLGLTILEVACNMELPHGGEGW----------QQLRQGYLPPEFTAGLSSELRS 283
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLEE 254
L L DPK R A LL P L +
Sbjct: 284 VLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 27/262 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPK-----SEFLQREQKFLSSLNSPHIVGYKGC 63
IG+G+ + V L +G +AAK K + L+RE + L +IV
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH-- 69
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
D SE+ + L + GG L ++I D S + +QIL+ + + H V
Sbjct: 70 DSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCI---QQILEAVLHCHQMGV 124
Query: 122 VHCDIKSRNILMAE----SGAKIADFGCA---KWESEA-LQSGGTPMFMAPEVARGEHQG 173
VH D+K N+L+A + K+ADFG A + + +A GTP +++PEV R E G
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 174 FASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI---AYSRELPEVPAFLSKQANDFLS 230
DIWA G + + G P+ + D + +I AY PE ++ +A + ++
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDT-VTPEAKNLIN 242
Query: 231 NCLRRDPKERWAASQLLKHPFL 252
L +P +R A + LKHP++
Sbjct: 243 QMLTINPAKRITAHEALKHPWV 264
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
L++E + L +L +IV YKG + +ED L ME+ P G+L + + +N +++
Sbjct: 70 LKKEIEILRNLYHENIVKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW-----ESEALQS 155
+ Y QI +G++YL S + VH D+ +RN+L+ +E KI DFG K E ++
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 156 G-GTPMF-MAPEVARGEHQGFASDIWAVGCTVIEMAS 190
+P+F APE ASD+W+ G T+ E+ +
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 9 IGQGSSATVSLATSLRSGDVFA---AKSTELPKSEF--LQREQKFLSSLNSPHIVGYKGC 63
IG+GS TV + A + +L KSE + E + L L P+IV +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 64 DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR--V 121
++ K L E GTL + R ++ S+ RQIL+GL++LH+ +
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKV-XKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 122 VHCDIKSRNILMA--ESGAKIADFGCAKWESEALQSG--GTPMFMAPEVARGEHQGFASD 177
+H D+K NI + KI D G A + + GTP F APE ++ + D
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDE-SVD 211
Query: 178 IWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
++A G +E A+ P+ + + ++ + + + + C+R++
Sbjct: 212 VYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 238 KERWAASQLLKHPFLEE 254
ER++ LL H F +E
Sbjct: 272 DERYSIKDLLNHAFFQE 288
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESL 101
L++E + L +L +IV YKG + +ED L ME+ P G+L + + +N +++
Sbjct: 58 LKKEIEILRNLYHENIVKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 115
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW-----ESEALQS 155
+ Y QI +G++YL S + VH D+ +RN+L+ +E KI DFG K E ++
Sbjct: 116 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 156 G-GTPMF-MAPEVARGEHQGFASDIWAVGCTVIEMAS 190
+P+F APE ASD+W+ G T+ E+ +
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKS----TELPKSEFLQREQKFLSSLNSPHIV 58
W +GQG++A V ++GD+FA K + L + RE + L LN +IV
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEYL 116
K + E L ME+ P G+L + N L ES + R ++ G+ +L
Sbjct: 71 --KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 117 HSNRVVHCDIKSRNIL--MAESGA---KIADFGCAKW---ESEALQSGGTPMFMAPE--- 165
N +VH +IK NI+ + E G K+ DFG A+ + + + GT ++ P+
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 166 --VARGEHQ---GFASDIWAVGCTVIEMASGGAPWPNAADP---MTVLYKI 208
V R +HQ G D+W++G T A+G P+ P V+YKI
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V + ++SG A K P + RE + L + +++G
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL--L 116
Query: 64 DVTSEDNKLM-YN--LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
DV + L +N + + G LN+ + +L + + QIL+GL+Y+HS
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 174
Query: 121 VVHCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASD 177
++H D+K N+ + E KI DFG A+ + E T + APE+ H D
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 178 IWAVGCTVIEMASGGAPWP--------------NAADPMTVLYKIA------YSRELPEV 217
IW+VGC + E+ +G +P P +V+ ++ Y LP++
Sbjct: 235 IWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQM 294
Query: 218 P------AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
P F+ A D L L D +R AS+ L HP+ ++
Sbjct: 295 PKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKS----TELPKSEFLQREQKFLSSLNSPHIV 58
W +GQG++A V ++GD+FA K + L + RE + L LN +IV
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEYL 116
K + E L ME+ P G+L + N L ES + R ++ G+ +L
Sbjct: 71 --KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 117 HSNRVVHCDIKSRNIL--MAESGA---KIADFGCAKW---ESEALQSGGTPMFMAPE--- 165
N +VH +IK NI+ + E G K+ DFG A+ + + + GT ++ P+
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 166 --VARGEHQ---GFASDIWAVGCTVIEMASGGAPWPNAADP---MTVLYKI 208
V R +HQ G D+W++G T A+G P+ P V+YKI
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTEL-PKSEFLQ-------REQKFLSSLNSPHIVGY 60
+G+G ATV A + + A K +L +SE RE K L L+ P+I+G
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ L+++ FME L I N L S I +Y LQGLEYLH +
Sbjct: 78 LDAFGHKSNISLVFD-FME----TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGGTPM-----------FMAPEVAR 168
++H D+K N+L+ E+G K+ADFG AK S G+P + APE+
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK-------SFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 169 GEHQ-GFASDIWAVGCTVIEM 188
G G D+WAVGC + E+
Sbjct: 186 GARMYGVGVDMWAVGCILAEL 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS-----EFLQREQKFLSSLNSPHI 57
+T +TIG+GS V +A ++ G + ++PK + ++E + + SL+ P+I
Sbjct: 28 YTLENTIGRGSWGEVKIA--VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-HRNGGRLDESLIVSYTRQILQGLEYL 116
+ T EDN +Y L ME GG L + + H+ R ES + +L + Y
Sbjct: 86 IRLYE---TFEDNTDIY-LVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYC 139
Query: 117 HSNRVVHCDIKSRNILM----AESGAKIADFG-CAKWESEALQSG--GTPMFMAPEVARG 169
H V H D+K N L +S K+ DFG A+++ + GTP +++P+V G
Sbjct: 140 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 199
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF-LSKQANDF 228
+ G D W+ G + + G P+ D +L + PE +S QA
Sbjct: 200 LY-GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
+ L + PK+R + Q L+H + E+
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 23/266 (8%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKS-----EFLQREQKFLSSLNSPHI 57
+T +TIG+GS V +A ++ G + ++PK + ++E + + SL+ P+I
Sbjct: 11 YTLENTIGRGSWGEVKIA--VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-HRNGGRLDESLIVSYTRQILQGLEYL 116
+ T EDN +Y L ME GG L + + H+ R ES + +L + Y
Sbjct: 69 IRLYE---TFEDNTDIY-LVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYC 122
Query: 117 HSNRVVHCDIKSRNILM----AESGAKIADFG-CAKWESEALQSG--GTPMFMAPEVARG 169
H V H D+K N L +S K+ DFG A+++ + GTP +++P+V G
Sbjct: 123 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 182
Query: 170 EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAF-LSKQANDF 228
+ G D W+ G + + G P+ D +L + PE +S QA
Sbjct: 183 LY-GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEE 254
+ L + PK+R + Q L+H + E+
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 10 GQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---------EQKFLSSLNSPHIVGY 60
G G V T +G +FA K L K+ ++ E+ L + P IV
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
T KL L +EY GG L ++ R G ++++ Y +I L +LH
Sbjct: 87 IYAFQTG--GKLY--LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQKG 141
Query: 121 VVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQ 172
+++ D+K NI++ G K+ DFG K E++ G GT +MAPE+
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + +M +G P+ T+ + L P +L+++A D L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---PPYLTQEARDLLKKL 255
Query: 233 LRRDPKERWA-----ASQLLKHPFL 252
L+R+ R A ++ HPF
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 10 GQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR---------EQKFLSSLNSPHIVGY 60
G G V T +G +FA K L K+ ++ E+ L + P IV
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKV--LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
T KL L +EY GG L ++ R G ++++ Y +I L +LH
Sbjct: 87 IYAFQTG--GKLY--LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQKG 141
Query: 121 VVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG-------GTPMFMAPEVARGEHQ 172
+++ D+K NI++ G K+ DFG K E++ G GT +MAPE+
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 173 GFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
A D W++G + +M +G P+ T+ + L P +L+++A D L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---PPYLTQEARDLLKKL 255
Query: 233 LRRDPKERWA-----ASQLLKHPFL 252
L+R+ R A ++ HPF
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 115/282 (40%), Gaps = 42/282 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKS---TELPKSEFLQREQKFLSSLNSPHIV 58
D+ +GQG+ V A + +A K TE S L E L+SLN ++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVV 65
Query: 59 GYKGC---------DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQI 109
Y +T+ K + MEY GTL D IH RQI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 110 LQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK-----------------WESE 151
L+ L Y+HS ++H D+K NI + ES KI DFG AK S+
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 152 ALQSG-GTPMFMAPEVARGE-HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI- 208
L S GT M++A EV G H D++++G EM P+ + + +L K+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLR 242
Query: 209 AYSRELPEVPAF---LSKQANDFLSNCLRRDPKERWAASQLL 247
+ S E P P F K + + DP +R A LL
Sbjct: 243 SVSIEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 89 EIHRNGGRLDESLIVSYTRQILQGLEYLHSN-RVVHCDIKSRNILMAESG-AKIADFGCA 146
++ G + E ++ I++ LE+LHS V+H D+K N+L+ G K DFG +
Sbjct: 125 QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
Query: 147 KW----ESEALQSGGTPMFMAPEVARGE--HQGFA--SDIWAVGCTVIEMASGGAPWPNA 198
+ ++ + +G P + APE E +G++ SDIW++G T IE+A P+ +
Sbjct: 185 GYLVDDVAKDIDAGCKP-YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSW 243
Query: 199 ADPMTVLYKIAYSRELPEVPA-FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P L ++ P++PA S + DF S CL+++ KER +L +HPF
Sbjct: 244 GTPFQQLKQVV-EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 40/278 (14%)
Query: 8 TIGQGSSATVSLATSLR---SGDVFAAKSTELPKSEFLQR---------EQKFLSSL-NS 54
+G G+ V L + +G ++A K L K+ +Q+ E++ L + S
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKV--LKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P +V T + KL +L ++Y GG L + + R E + Y +I+ LE
Sbjct: 119 PFLVTLHYAFQT--ETKL--HLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALE 173
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKW----ESE-ALQSGGTPMFMAPEVAR 168
+LH +++ DIK NIL+ +G + DFG +K E+E A GT +MAP++ R
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 233
Query: 169 GEHQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL----PEVPAFLS 222
G G A D W++G + E+ +G +P+ + + + SR + P P +S
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKSEPPYPQEMS 290
Query: 223 KQANDFLSNCLRRDPKERWA-----ASQLLKHPFLEEF 255
A D + L +DPK+R A ++ +H F ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 29/244 (11%)
Query: 28 VFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLN 87
V A K L + QRE + L++L HIV + G V + + L+ + EY G LN
Sbjct: 50 VKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG--VCGDGDPLI--MVFEYMKHGDLN 105
Query: 88 DEIHRNG---------------GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ +G G L S ++ QI G+ YL S VH D+ +RN L
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 165
Query: 133 M-AESGAKIADFGCAK--WESEALQSGGTPMF----MAPEVARGEHQGFASDIWAVGCTV 185
+ A KI DFG ++ + ++ + GG M M PE SD+W+ G +
Sbjct: 166 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225
Query: 186 IEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAAS 244
E+ + G PW ++ V+ I R L E P K+ D + C +R+P++R
Sbjct: 226 WEIFTYGKQPWFQLSN-TEVIECITQGRVL-ERPRVCPKEVYDVMLGCWQREPQQRLNIK 283
Query: 245 QLLK 248
++ K
Sbjct: 284 EIYK 287
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 22/271 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-----PKSEFLQREQKFLSSLNSPH 56
D+ +TIG GS G + K + + + L E L L P+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR---LDESLIVSYTRQILQGL 113
IV Y + N +Y + MEY GG L I + LDE ++ Q+ L
Sbjct: 67 IVRYYD-RIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 114 EYLH-----SNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGGTPMFMA 163
+ H + V+H D+K N+ + + K+ DFG A+ E A + GTP +M+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 164 PEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSK 223
PE SDIW++GC + E+ + P+ A + KI + +P S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKIREGK-FRRIPYRYSD 242
Query: 224 QANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ N+ ++ L R + ++L++P + E
Sbjct: 243 ELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV--- 65
IG G +V G ++A K ++ P + + EQ L + + ++G V
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYF 73
Query: 66 ---TSEDNKLMYNLFMEYAPGGTLNDEI---HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D+ L+ N EY GG+L D I +R E+ + Q+ +GL Y+HS
Sbjct: 74 SAWAEDDHMLIQN---EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 130
Query: 120 RVVHCDIKSRNILMAESGA--------------------KIADFGCAKWESEALQSGGTP 159
+VH DIK NI ++ + KI D G S G
Sbjct: 131 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 190
Query: 160 MFMAPEVARGEHQGF-ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVP 218
F+A EV + + +DI+A+ TV+ A+G P P D ++I R LP +P
Sbjct: 191 RFLANEVLQENYTHLPKADIFALALTVV-XAAGAEPLPRNGDQW---HEIRQGR-LPRIP 245
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
LS++ + L + DP+ R +A L+KH L
Sbjct: 246 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 279
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAE---SGAKIADFGCAKWESEALQSG- 156
L+ + ILQ L+ LH NR++HCD+K NIL+ + SG K+ DFG + +E + + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP 196
+ + APEV G G D+W++GC + E+ +G P
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 218 PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P FL DFL CL DP R Q L+HP+L
Sbjct: 383 PLFL-----DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAE---SGAKIADFGCAKWESEALQSG- 156
L+ + ILQ L+ LH NR++HCD+K NIL+ + SG K+ DFG + +E + + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI 260
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP 196
+ + APEV G G D+W++GC + E+ +G P
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 218 PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P FL DFL CL DP R Q L+HP+L
Sbjct: 383 PLFL-----DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKST----ELPKSEFLQREQKFLSSLNSPHI 57
D G +G+G T +G+V K E + FL +E K + L P++
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-KEVKVMRCLEHPNV 69
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
+ + G V +D +L N EY GGTL I + S VS+ + I G+ YLH
Sbjct: 70 LKFIG--VLYKDKRL--NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 118 SNRVVHCDIKSRNILMAES-GAKIADFGCA------KWESEALQS------------GGT 158
S ++H D+ S N L+ E+ +ADFG A K + E L+S G
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 159 PMFMAPEVARGEHQGFASDIWAVGCTVIEM 188
P +MAPE+ G D+++ G + E+
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV--- 65
IG G +V G ++A K ++ P + + EQ L + + ++G V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYF 75
Query: 66 ---TSEDNKLMYNLFMEYAPGGTLNDEI---HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D+ L+ N EY GG+L D I +R E+ + Q+ +GL Y+HS
Sbjct: 76 SAWAEDDHMLIQN---EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 120 RVVHCDIKSRNILMAESGA--------------------KIADFGCAKWESEALQSGGTP 159
+VH DIK NI ++ + KI D G S G
Sbjct: 133 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 160 MFMAPEVARGEHQGF-ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVP 218
F+A EV + + +DI+A+ TV+ A+G P P D ++I R LP +P
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQW---HEIRQGR-LPRIP 247
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
LS++ + L + DP+ R +A L+KH L
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV--- 65
IG G +V G ++A K ++ P + + EQ L + + ++G V
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYF 77
Query: 66 ---TSEDNKLMYNLFMEYAPGGTLNDEI---HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D+ L+ N EY GG+L D I +R E+ + Q+ +GL Y+HS
Sbjct: 78 SAWAEDDHMLIQN---EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134
Query: 120 RVVHCDIKSRNILMAESGA--------------------KIADFGCAKWESEALQSGGTP 159
+VH DIK NI ++ + KI D G S G
Sbjct: 135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 194
Query: 160 MFMAPEVARGEHQGF-ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVP 218
F+A EV + + +DI+A+ TV+ A+G P P D ++I R LP +P
Sbjct: 195 RFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQW---HEIRQGR-LPRIP 249
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
LS++ + L + DP+ R +A L+KH L
Sbjct: 250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++ + SP++ G +TS L + P G L D + N GRL +++
Sbjct: 69 EAYVMAGVGSPYVSRLLGICLTST-----VQLVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ + + KI DFG A+ E+E GG
Sbjct: 124 WCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEV 217
P+ +MA E SD+W+ G TV E+ + GA + + + LP+
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ- 242
Query: 218 PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQ------IQESNCSPTS 271
P + + C D + R +L+ EF + IQ + P S
Sbjct: 243 PPICTIDVYMIMVKCWMIDSECRPRFRELVS-----EFSRMARDPQRFVVIQNEDLGPAS 297
Query: 272 ILDQGIWNSVEETEESLGNLIHS 294
LD + S+ E ++ +G+L+ +
Sbjct: 298 PLDSTFYRSLLE-DDDMGDLVDA 319
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV--- 65
IG G +V G ++A K ++ P + + EQ L + + ++G V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYF 75
Query: 66 ---TSEDNKLMYNLFMEYAPGGTLNDEI---HRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D+ L+ N EY GG+L D I +R E+ + Q+ +GL Y+HS
Sbjct: 76 SAWAEDDHMLIQN---EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 120 RVVHCDIKSRNILMAESGA--------------------KIADFGCAKWESEALQSGGTP 159
+VH DIK NI ++ + KI D G S G
Sbjct: 133 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 160 MFMAPEVARGEHQGF-ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVP 218
F+A EV + + +DI+A+ TV+ A+G P P D ++I R LP +P
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQW---HEIRQGR-LPRIP 247
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
LS++ + L + DP+ R +A L+KH L
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 101 LIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAE---SGAKIADFGCAKWESEALQSG- 156
L+ + ILQ L+ LH NR++HCD+K NIL+ + SG K+ DFG + +E + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXI 260
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP 196
+ + APEV G G D+W++GC + E+ +G P
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 218 PAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P FL DFL CL DP R Q L+HP+L
Sbjct: 383 PLFL-----DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 34/227 (14%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGT--LNDEIHRNGGRLDE 99
+++E + L L +++ + DV + K + MEY G + D + R
Sbjct: 53 VKKEIQLLRRLRHKNVI--QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK--RFPV 108
Query: 100 SLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQ---- 154
Y Q++ GLEYLHS +VH DIK N+L+ G KI+ G A EAL
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA----EALHPFAA 164
Query: 155 ------SGGTPMFMAPEVARG--EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY 206
S G+P F PE+A G GF DIW+ G T+ + +G +P D + L+
Sbjct: 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL--YPFEGDNIYKLF 222
Query: 207 ----KIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
K +Y+ +P +D L L +P +R++ Q+ +H
Sbjct: 223 ENIGKGSYA-----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNS---PHIVGY 60
IG G+ TV A SG A KS +P E RE L L + P++V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 61 KG-CDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
C + D ++ L E+ T D+ G L I RQ L+GL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-----FMAPEVARGEH 171
+N +VH D+K NIL+ G K+ADFG A+ S Q P+ + APEV
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTLWYRAPEVLLQST 187
Query: 172 QGFASDIWAVGCTVIEM 188
D+W+VGC EM
Sbjct: 188 YATPVDMWSVGCIFAEM 204
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ--------REQKFLSSLNS---PHI 57
IG G+ TV A SG A KS +P RE L L + P++
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 58 VGYKG-CDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
V C + D ++ L E+ T D+ G L I RQ L+GL+
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLD 134
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-----FMAPEVAR 168
+LH+N +VH D+K NIL+ G K+ADFG A+ S Q TP+ + APEV
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLWYRAPEVLL 192
Query: 169 GEHQGFASDIWAVGCTVIEM 188
D+W+VGC EM
Sbjct: 193 QSTYATPVDMWSVGCIFAEM 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNS---PHIVGY 60
IG G+ TV A SG A KS +P E RE L L + P++V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 61 KG-CDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
C + D ++ L E+ T D+ G L I RQ L+GL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGGTPMFMAPEVARGEHQG 173
+N +VH D+K NIL+ G K+ADFG A+ ++ T + APEV
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYA 189
Query: 174 FASDIWAVGCTVIEM 188
D+W+VGC EM
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNS---PHIVGY 60
IG G+ TV A SG A KS +P E RE L L + P++V
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 61 KG-CDVTSEDNKLMYNLFMEYAPGG--TLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
C + D ++ L E+ T D+ G L I RQ L+GL++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-----FMAPEVARGEH 171
+N +VH D+K NIL+ G K+ADFG A+ S Q P+ + APEV
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWYRAPEVLLQST 187
Query: 172 QGFASDIWAVGCTVIEM 188
D+W+VGC EM
Sbjct: 188 YATPVDMWSVGCIFAEM 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTS 67
+G+G+ V A R+ DV + + + E + LS +N P+IV G +
Sbjct: 15 VVGRGAFGVVCKA-KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIH--RNGGRLDESLIVSYTRQILQGLEYLHSNR---VV 122
L MEYA GG+L + +H + +S+ Q QG+ YLHS + ++
Sbjct: 74 ------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 123 HCDIKSRNILMAESGA--KIADFGCA-KWESEALQSGGTPMFMAPEVARGEHQGFASDIW 179
H D+K N+L+ G KI DFG A ++ + G+ +MAPEV G + D++
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
+ G + E+ + P+ P + ++ P + L K ++ C +DP +
Sbjct: 188 SWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQ 247
Query: 240 RWAASQLLK 248
R + +++K
Sbjct: 248 RPSMEEIVK 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + MEY G L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLN 53
D+ +G+GS V LA + +++A K L K +Q E++ L+ L+
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 54 SP-HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
P + C T ++L + MEY GG L I + G + E V Y +I G
Sbjct: 78 KPPFLTQLHSCFQTV--DRLYF--VMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISIG 132
Query: 113 LEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSG-------GTPMFMAP 164
L +LH +++ D+K N+++ +E KIADFG K E + G GTP ++AP
Sbjct: 133 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAP 189
Query: 165 EVARGEHQGFASDIWAVGCTVIEMASGGAPW 195
E+ + G + D WA G + EM +G P+
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKG----- 62
IG+G+ + V++ ++G V+A K K + L+R + +S V G
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMN--KWDMLKRGE--VSCFREERDVLVNGDRRWI 123
Query: 63 --CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+D +Y L MEY GG L + + G R+ + Y +I+ ++ +H
Sbjct: 124 TQLHFAFQDENYLY-LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 121 VVHCDIKSRNILMAESG-AKIADFG-CAKWESE----ALQSGGTPMFMAPEVARGEHQGF 174
VH DIK NIL+ G ++ADFG C K ++ +L + GTP +++PE+ + G
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 175 AS-------DIWAVGCTVIEMASGGAPWPNAADPMTVLY-KIAYSRE---LPEVPAFLSK 223
+ D WA+G EM G P+ AD Y KI + +E LP V + +
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPF--YADSTAETYGKIVHYKEHLSLPLVDEGVPE 300
Query: 224 QANDFLSNCLRRDPKE----RWAASQLLKHPFL 252
+A DF+ L P E R A HPF
Sbjct: 301 EARDFIQRLLC--PPETRLGRGGAGDFRTHPFF 331
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAE-SGAKIADFG-CAKWESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E S KI DFG C + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTS 67
+G+G+ V A R+ DV + + + E + LS +N P+IV G +
Sbjct: 16 VVGRGAFGVVCKA-KWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIH--RNGGRLDESLIVSYTRQILQGLEYLHSNR---VV 122
L MEYA GG+L + +H + +S+ Q QG+ YLHS + ++
Sbjct: 75 ------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 123 HCDIKSRNILMAESGA--KIADFGCA-KWESEALQSGGTPMFMAPEVARGEHQGFASDIW 179
H D+K N+L+ G KI DFG A ++ + G+ +MAPEV G + D++
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 180 AVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
+ G + E+ + P+ P + ++ P + L K ++ C +DP +
Sbjct: 189 SWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQ 248
Query: 240 RWAASQLLK 248
R + +++K
Sbjct: 249 RPSMEEIVK 257
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 114/282 (40%), Gaps = 42/282 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKS---TELPKSEFLQREQKFLSSLNSPHIV 58
D+ +GQG+ V A + +A K TE S L E L+SLN ++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVV 65
Query: 59 GYKGC---------DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQI 109
Y +T+ K + MEY TL D IH RQI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 110 LQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK-----------------WESE 151
L+ L Y+HS ++H D+K NI + ES KI DFG AK S+
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 152 ALQSG-GTPMFMAPEVARGE-HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI- 208
L S GT M++A EV G H D++++G EM P+ + + +L K+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLR 242
Query: 209 AYSRELPEVPAF---LSKQANDFLSNCLRRDPKERWAASQLL 247
+ S E P P F K + + DP +R A LL
Sbjct: 243 SVSIEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 22/271 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-----PKSEFLQREQKFLSSLNSPH 56
D+ +TIG GS G + K + + + L E L L P+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR---LDESLIVSYTRQILQGL 113
IV Y + N +Y + MEY GG L I + LDE ++ Q+ L
Sbjct: 67 IVRYYD-RIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 114 EYLH-----SNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGGTPMFMA 163
+ H + V+H D+K N+ + + K+ DFG A+ S A GTP +M+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 164 PEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSK 223
PE SDIW++GC + E+ + P+ A + KI + +P S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKIREGK-FRRIPYRYSD 242
Query: 224 QANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ N+ ++ L R + ++L++P + E
Sbjct: 243 ELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 22/271 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL-----PKSEFLQREQKFLSSLNSPH 56
D+ +TIG GS G + K + + + L E L L P+
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR---LDESLIVSYTRQILQGL 113
IV Y + N +Y + MEY GG L I + LDE ++ Q+ L
Sbjct: 67 IVRYYD-RIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 114 EYLH-----SNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGGTPMFMA 163
+ H + V+H D+K N+ + + K+ DFG A+ S A GTP +M+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 164 PEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSK 223
PE SDIW++GC + E+ + P+ A + KI + +P S
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKIREGK-FRRIPYRYSD 242
Query: 224 QANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ N+ ++ L R + ++L++P + E
Sbjct: 243 ELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 31 AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI 90
++ TE+ + E RE + LN P+++ G + E + ++ + Y G L I
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG---LPHVLLPYMCHGDLLQFI 114
Query: 91 ---HRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCA 146
RN D ++S+ Q+ +G+EYL + VH D+ +RN ++ ES K+ADFG A
Sbjct: 115 RSPQRNPTVKD---LISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA 171
Query: 147 K-------WESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNA 198
+ + + + P+ + A E + SD+W+ G + E+ + GAP
Sbjct: 172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH 231
Query: 199 ADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
DP + + +A R LP+ P + + C DP R
Sbjct: 232 IDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVR 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + +EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQRE-------QKFLSSL-- 52
D+ +G+GS V L+ + +++A K L K +Q + +K + +L
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
P + C T ++L + MEY GG L I + G R E V Y +I G
Sbjct: 79 KPPFLTQLHSCFQTM--DRLYF--VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIG 133
Query: 113 LEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAK---WESEALQSG-GTPMFMAPEVA 167
L +L S +++ D+K N+++ +E KIADFG K W+ + GTP ++APE+
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 193
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPW 195
+ G + D WA G + EM +G AP+
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + +EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++SY+ Q+ +G+E+L S + +H D+ +RNIL++E+ KI DFG A+ + ++ G
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
T + +MAPE + SD+W+ G + E+ S GG+P+P ++
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ P + + + + +C RDPKER ++L++
Sbjct: 321 M-RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 123 HCDIKSRNILMAE-SGAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E S KI DFG A+ + E T + APE+ H DIW
Sbjct: 150 HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 123 HCDIKSRNILMAE-SGAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E S KI DFG A+ + E T + APE+ H DIW
Sbjct: 154 HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 86
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFP 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCAKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 97
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFP 243
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 79
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFP 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 287
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 91
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 204
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 273
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 17 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 71
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 72 VVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 189 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 246
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 247 PEERPTFEYL--QAFLEDYFTSTE 268
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQRE-------QKFLSSL-- 52
D+ +G+GS V L+ + +++A K L K +Q + +K + +L
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
P + C T ++L + MEY GG L I + G R E V Y +I G
Sbjct: 400 KPPFLTQLHSCFQTM--DRLYF--VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIG 454
Query: 113 LEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAK---WESEALQSG-GTPMFMAPEVA 167
L +L S +++ D+K N+++ +E KIADFG K W+ + GTP ++APE+
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII 514
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPW 195
+ G + D WA G + EM +G AP+
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 82
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFP 228
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 15 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 69
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 70 VVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 187 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 244
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 245 PEERPTFEYL--QAFLEDYFTSTE 266
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + D + Y QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY--QILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
IG G+ +V A ++G A K P + RE + L + +++G
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + D + Y QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY--QILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 217
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 218 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 277
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 278 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 227 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 286
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 287 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 287
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 19/260 (7%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKS------TELPKSEFLQREQKFLSSLNSPHIVGYKG 62
IG+GS V + + ++A K E + + +E + + L P +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 63 CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
ED ++ +L + GG L + +N E + + +++ L+YL + R++
Sbjct: 83 SFQDEEDMFMVVDLLL----GGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRII 137
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKW---ESEALQSGGTPMFMAPEV---ARGEHQGFA 175
H D+K NIL+ E G I DF A E++ GT +MAPE+ +G FA
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 176 SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRR 235
D W++G T E+ G P+ + + + + P+ S++ L L
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEP 257
Query: 236 DPKERWAA-SQLLKHPFLEE 254
+P +R++ S + P++ +
Sbjct: 258 NPDQRFSQLSDVQNFPYMND 277
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVA-RGEHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + + T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + + T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 106
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 219
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 252
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 79 EYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG 137
EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+ E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 151
Query: 138 A-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASG 191
K+ADFG A+ E A Q P+ + APE A SD+W+ G + E+ +
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 192 G-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHP 250
G P+P + VL ++ +P P + +D + C R+DP+ER L
Sbjct: 212 GRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL--QA 267
Query: 251 FLEEFCSCTK 260
FLE++ + T+
Sbjct: 268 FLEDYFTSTE 277
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + + T + APE+ H DIW
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 83
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 196
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 45/299 (15%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSE----FLQREQKFLSSLNSPHIV 58
+ + +G+G+ ATV S + ++ A K L E RE L L +IV
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
D+ + L L EY L + G ++ + + Q+L+GL Y H
Sbjct: 64 TLH--DIIHTEKSL--TLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 119 NRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQG 173
+V+H D+K +N+L+ E G K+ADFG A+ +S ++ T + P++ G
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 174 FAS-DIWAVGCTVIEMASGGAPWPNAA--DPMTVLYKIAYSRELPEVPAFLSKQ------ 224
D+W VGC EMA+G +P + + + +++I + P LS +
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238
Query: 225 -------------------ANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQE 264
D L+ L+ + + R +A +KHPF F S ++I +
Sbjct: 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF---FLSLGERIHK 294
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 225
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 153 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ ++ + T + APE+ H DIW
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 22/253 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKST---ELP---KSEFLQREQKFLSSLNSP 55
D G IG+G+ V + LR+ + A + LP K++FLQ E + L + P
Sbjct: 115 DLVLGEQIGRGNFGEV-FSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHP 172
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+IV G V ++ + + ME GG + G RL ++ G+EY
Sbjct: 173 NIVRLIG--VCTQKQPIY--IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQ--SGG---TPM-FMAPEVAR 168
L S +H D+ +RN L+ E KI+DFG ++ E++ + SGG P+ + APE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 169 GEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
SD+W+ G + E S G +P+PN ++ T + + LP P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF-VEKGGRLP-CPELCPDAVFR 346
Query: 228 FLSNCLRRDPKER 240
+ C +P +R
Sbjct: 347 LMEQCWAYEPGQR 359
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 114
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 227
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 260
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ ++ + T + APE+ H DIW
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 231 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 290
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 291 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAK--STELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
TIG+G V L G+ A K + FL E ++ L ++V G
Sbjct: 199 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-EASVMTQLRHSNLVQLLG-- 253
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHSNRVV 122
V E+ +Y + EY G+L D + R+ GR L ++ ++ + + +EYL N V
Sbjct: 254 VIVEEKGGLY-IVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-FMAPEVARGEHQGFASDIWA 180
H D+ +RN+L++E AK++DFG K S +G P+ + APE R + SD+W+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 371
Query: 181 VGCTVIEMAS-GGAPWPNAADPMT-VLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPK 238
G + E+ S G P+P P+ V+ ++ ++ + P D + NC D
Sbjct: 372 FGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKM-DAPDGCPPAVYDVMKNCWHLDAA 428
Query: 239 ERWAASQL 246
R QL
Sbjct: 429 TRPTFLQL 436
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 159 HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 219 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 278
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 279 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 116
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 229
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 262
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 76 LFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 314
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
E+ K+ADFG A+ E A Q P+ + APE A SD+W+ G + E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 189 ASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ G P+P + VL ++ +P P + +D + C R++P+ER L
Sbjct: 375 TTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL- 431
Query: 248 KHPFLEEFCSCTK 260
FLE++ + T+
Sbjct: 432 -QAFLEDYFTSTE 443
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 191
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEA---LQSGGTPMFMAPEVARG 169
Y+HS + H DIK +N+L+ A K+ DFG AK + + + APE+ G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 170 EHQGFAS-DIWAVGCTVIEMASGGAPWP 196
+S D+W+ GC + E+ G +P
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 76 LFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 315
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
E+ K+ADFG + E A Q P+ + APE A SD+W+ G + E+
Sbjct: 316 ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 189 ASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ G P+P + VL ++ +P P + +D + C R+DP+ER L
Sbjct: 376 TTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKDPEERPTFEYL- 432
Query: 248 KHPFLEEFCSCTK 260
FLE++ + T+
Sbjct: 433 -QAFLEDYFTSTE 444
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ ++ + T + APE+ H DIW
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 205 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 264
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 265 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 171 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 231 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 290
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 291 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 159 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 219 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 278
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 279 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A R A K P + RE + L L +++G
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL--L 93
Query: 64 DVTS-----EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
DV + ED +Y + G LN+ + L + + Q+L+GL+Y+HS
Sbjct: 94 DVFTPATSIEDFSEVY--LVTTLMGADLNNIVKSQA--LSDEHVQFLVYQLLRGLKYIHS 149
Query: 119 NRVVHCDIKSRNILMAE-SGAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFA 175
++H D+K N+ + E S +I DFG A+ E + T + APE+ H
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 176 SDIWAVGCTVIEMASGGAPWP--NAADPMT------------VLYKIA------YSRELP 215
DIW+VGC + E+ G A +P + D + VL KI+ Y + LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 216 EVP----AFLSKQAN----DFLSNCLRRDPKERWAASQLLKHPFLEEF 255
+P + + + AN D L L D +R +A++ L H + ++
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 153 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 76 LFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+
Sbjct: 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 314
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
E+ K+ADFG A+ E A Q P+ + APE A SD+W+ G + E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 189 ASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ G P+P + VL ++ +P P + +D + C R++P+ER L
Sbjct: 375 TTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL- 431
Query: 248 KHPFLEEFCSCTK 260
FLE++ + T+
Sbjct: 432 -QAFLEDYFTSTE 443
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 146
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 147 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 206
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 207 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 266
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 267 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 22/253 (8%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKST---ELP---KSEFLQREQKFLSSLNSP 55
D G IG+G+ V + LR+ + A + LP K++FLQ E + L + P
Sbjct: 115 DLVLGEQIGRGNFGEV-FSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHP 172
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
+IV G V ++ + + ME GG + G RL ++ G+EY
Sbjct: 173 NIVRLIG--VCTQKQPIY--IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 116 LHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQ--SGG---TPM-FMAPEVAR 168
L S +H D+ +RN L+ E KI+DFG ++ E++ + SGG P+ + APE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 169 GEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQAND 227
SD+W+ G + E S G +P+PN ++ T + + LP P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF-VEKGGRLP-CPELCPDAVFR 346
Query: 228 FLSNCLRRDPKER 240
+ C +P +R
Sbjct: 347 LMEQCWAYEPGQR 359
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 145 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 205 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 264
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 265 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 155 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 1 MDWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGY 60
+ +T IG GS V A SG++ A K L F RE + + L+ +IV
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNRELQIMRKLDHCNIVRL 157
Query: 61 KGCDVTSEDNK--LMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR----QILQGLE 114
+ +S + K + NL ++Y P + R+ R ++L V Y + Q+ + L
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 115 YLHSNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGGTP--------MFMAP 164
Y+HS + H DIK +N+L+ A K+ DFG AK G P + AP
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-----GEPNVSYICSRYYRAP 270
Query: 165 EVARGEHQGFAS-DIWAVGCTVIEMASGGAPWP 196
E+ G +S D+W+ GC + E+ G +P
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 303
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 160 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 79 EYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG 137
EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+ E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 317
Query: 138 A-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASG 191
K+ADFG A+ E A Q P+ + APE A SD+W+ G + E+ +
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 377
Query: 192 G-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHP 250
G P+P + VL ++ +P P + +D + C R++P+ER L
Sbjct: 378 GRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL--QA 433
Query: 251 FLEEFCSCTK 260
FLE++ + T+
Sbjct: 434 FLEDYFTSTE 443
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 26/250 (10%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
+T +G V++ T K L E E + +L+ PHIV G +
Sbjct: 29 YTNHKGEKINVAVKT--------CKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--II 78
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
E+ + ME P G L + RN L +V Y+ QI + + YL S VH DI
Sbjct: 79 EEEPTW---IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 135
Query: 127 KSRNILMAE-SGAKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
RNIL+A K+ DFG +++ + + ++ T + +M+PE ASD+W
Sbjct: 136 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 195
Query: 181 VGCTVIEMASGGAP---WPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
+ E+ S G W D + VL K LP+ P ++ C DP
Sbjct: 196 FAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPPVLYTLMTRCWDYDP 251
Query: 238 KERWAASQLL 247
+R ++L+
Sbjct: 252 SDRPRFTELV 261
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 5 RGHTIGQGSSATVSLATSLRSGD-------VFAAKSTELPKS--EFLQREQKFLSSLNSP 55
R +G G+ TV + G+ + T PK+ EF+ E ++S++ P
Sbjct: 19 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMASMDHP 77
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
H+V G ++ L + P G L + +H + + L++++ QI +G+ Y
Sbjct: 78 HLVRLLGVCLSPT-----IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 116 LHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-TPM-FMAPEVAR 168
L R+VH D+ +RN+L+ + + KI DFG A+ E E GG P+ +MA E
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 169 GEHQGFASDIWAVGCTVIE-MASGGAPW 195
SD+W+ G T+ E M GG P+
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 146 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 206 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 265
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 266 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 287
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 16 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 70
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 71 VVSEEP---IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R++
Sbjct: 188 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKE 245
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 246 PEERPTFEYL--QAFLEDYFTSTE 267
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 150 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DFG A+ + E T + APE+ H DIW
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 227 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 286
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 287 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 137/328 (41%), Gaps = 57/328 (17%)
Query: 10 GQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKF---LSSLNSPHIVGYKGCDVT 66
GQG+ TV L +G A K + F RE + L+ L+ P+IV + T
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 67 --SEDNKLMY-NLFMEYAPGGTLNDEIHR---NGGRLDES----LIVSYTRQILQGLEYL 116
D + +Y N+ MEY P D +HR N R + LI + Q+++ + L
Sbjct: 91 LGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCL 145
Query: 117 H--SNRVVHCDIKSRNILMAESGA--KIADFGCAKWESEALQSGG---TPMFMAPEVARG 169
H S V H DIK N+L+ E+ K+ DFG AK S + + + + APE+ G
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205
Query: 170 -EHQGFASDIWAVGCTVIEMASG--------------------GAPWPNA---ADPMTVL 205
+H A DIW+VGC EM G G P +P
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTD 265
Query: 206 YKIAYSRELPEVPAFL------SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCT 259
+ S+ +P F +K+A D LS L+ P+ER + L HP+ +E
Sbjct: 266 VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA 325
Query: 260 KQIQESNCSPTSILDQGIWNSVEETEES 287
++ + P + + + N +E E+
Sbjct: 326 TKLPNNKDLPEDLF-RFLPNEIEVMSEA 352
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 76 LFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G+ L +V QI G+ Y+ VH D+++ NIL+
Sbjct: 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 397
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
E+ K+ADFG A+ E A Q P+ + APE A SD+W+ G + E+
Sbjct: 398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 189 ASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ G P+P + VL ++ +P P + +D + C R++P+ER L
Sbjct: 458 TTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYL- 514
Query: 248 KHPFLEEFCSCTK 260
FLE++ + T+
Sbjct: 515 -QAFLEDYFTSTE 526
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 127/310 (40%), Gaps = 56/310 (18%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE-----LPKSEFLQREQKFLSSLNSPHIVGYKG 62
TIG G+ VS A +G A K + ++ RE K L +I+ K
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 63 C---DVTSEDNKLMYNLF--MEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + K +Y + ME L+ IH + L + + Q+L+GL+Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLME----SDLHQIIH-SSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 118 SNRVVHCDIKSRNILMAES-GAKIADFGCAK--------WESEALQSGGTPMFMAPEVAR 168
S +V+H D+K N+L+ E+ KI DFG A+ + + T + APE+
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 169 GEHQGF-ASDIWAVGCTVIEMASG--------------------GAPWPNAADPMTVLYK 207
H+ A D+W+VGC EM + G P P +
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295
Query: 208 IAYSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCT 259
AY + LP VP +QA L LR +P R +A+ L+HPFL ++
Sbjct: 296 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 355
Query: 260 KQIQESNCSP 269
E +C+P
Sbjct: 356 ---DEPDCAP 362
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 77
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ +Y + EY G+L D + G+ L +V + QI G+ Y+ VH
Sbjct: 78 VVSEEP--IY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R++
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKE 252
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 253 PEERPTFEYL--QAFLEDYFTSTE 274
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 48/276 (17%)
Query: 6 GHTIGQGSSATVSLATSL----RSGDVFAA----KSTELPKSEF--LQREQKFLSSLNSP 55
G T+G+G V AT+ R+G A K P SE L E L +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP-SELRDLLSEFNVLKQVNHP 86
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-----------------------HR 92
H++ G S+D L+ L +EYA G+L + H
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 93 NGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK--WE 149
+ L ++S+ QI QG++YL ++VH D+ +RNIL+AE KI+DFG ++ +E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 150 SEAL---QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV 204
++ G P+ +MA E SD+W+ G + E+ + GG P+P P
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPER 260
Query: 205 LYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
L+ + + E P S++ + C +++P +R
Sbjct: 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 26/250 (10%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
+T +G V++ T K L E E + +L+ PHIV G +
Sbjct: 33 YTNHKGEKINVAVKT--------CKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--II 82
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
E+ + ME P G L + RN L +V Y+ QI + + YL S VH DI
Sbjct: 83 EEEPTW---IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 139
Query: 127 KSRNILMAE-SGAKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
RNIL+A K+ DFG +++ + + ++ T + +M+PE ASD+W
Sbjct: 140 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 199
Query: 181 VGCTVIEMASGGAP---WPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
+ E+ S G W D + VL K LP+ P ++ C DP
Sbjct: 200 FAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPPVLYTLMTRCWDYDP 255
Query: 238 KERWAASQLL 247
+R ++L+
Sbjct: 256 SDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 26/250 (10%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
+T +G V++ T K L E E + +L+ PHIV G +
Sbjct: 45 YTNHKGEKINVAVKT--------CKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--II 94
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
E+ + ME P G L + RN L +V Y+ QI + + YL S VH DI
Sbjct: 95 EEEPTW---IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 151
Query: 127 KSRNILMAE-SGAKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
RNIL+A K+ DFG +++ + + ++ T + +M+PE ASD+W
Sbjct: 152 AVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWM 211
Query: 181 VGCTVIEMASGGAP---WPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDP 237
+ E+ S G W D + VL K LP+ P ++ C DP
Sbjct: 212 FAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPPVLYTLMTRCWDYDP 267
Query: 238 KERWAASQLL 247
+R ++L+
Sbjct: 268 SDRPRFTELV 277
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 48/276 (17%)
Query: 6 GHTIGQGSSATVSLATSL----RSGDVFAA----KSTELPKSEF--LQREQKFLSSLNSP 55
G T+G+G V AT+ R+G A K P SE L E L +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP-SELRDLLSEFNVLKQVNHP 86
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-----------------------HR 92
H++ G S+D L+ L +EYA G+L + H
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 93 NGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK--WE 149
+ L ++S+ QI QG++YL ++VH D+ +RNIL+AE KI+DFG ++ +E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 150 SEAL---QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV 204
++ G P+ +MA E SD+W+ G + E+ + GG P+P P
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPER 260
Query: 205 LYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
L+ + + E P S++ + C +++P +R
Sbjct: 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 5 RGHTIGQGSSATVSLATSLRSGD-------VFAAKSTELPKS--EFLQREQKFLSSLNSP 55
R +G G+ TV + G+ + T PK+ EF+ E ++S++ P
Sbjct: 42 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMASMDHP 100
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
H+V G ++ L + P G L + +H + + L++++ QI +G+ Y
Sbjct: 101 HLVRLLGVCLSPT-----IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 116 LHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-TPM-FMAPEVAR 168
L R+VH D+ +RN+L+ + + KI DFG A+ E E GG P+ +MA E
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 169 GEHQGFASDIWAVGCTVIE-MASGGAPW 195
SD+W+ G T+ E M GG P+
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 81 VVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+ + NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R+D
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKD 255
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 256 PEERPTFEYL--QAFLEDYFTSTE 277
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 19 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 73
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ + EY G+L D + G+ L +V QI G+ Y+ VH
Sbjct: 74 VVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R++
Sbjct: 191 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKE 248
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 249 PEERPTFEYL--QAFLEDYFTSTE 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAK--STELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
TIG+G V L G+ A K + FL E ++ L ++V G
Sbjct: 12 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-EASVMTQLRHSNLVQLLG-- 66
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHSNRVV 122
V E+ +Y + EY G+L D + R+ GR L ++ ++ + + +EYL N V
Sbjct: 67 VIVEEKGGLY-IVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-FMAPEVARGEHQGFASDIWA 180
H D+ +RN+L++E AK++DFG K S +G P+ + APE R + SD+W+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 181 VGCTVIEMAS-GGAPWP 196
G + E+ S G P+P
Sbjct: 185 FGILLWEIYSFGRVPYP 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKS----EFLQREQKFLSSLNSPHIVGYKGCD 64
+GQG V + T +G A T P + FLQ E + + L +V
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYA-- 77
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
V SE+ +Y + EY G+L D + G+ L +V + QI G+ Y+ VH
Sbjct: 78 VVSEEP--IY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 124 CDIKSRNILMAESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASD 177
D+++ NIL+ E+ K+ADFG A+ E A Q P+ + APE A SD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 178 IWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRD 236
+W+ G + E+ + G P+P + VL ++ +P P + +D + C R++
Sbjct: 195 VWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMP-CPPECPESLHDLMCQCWRKE 252
Query: 237 PKERWAASQLLKHPFLEEFCSCTK 260
P+ER L FLE++ + T+
Sbjct: 253 PEERPTFEYL--QAFLEDYFTSTE 274
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI D+G A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A R A K P + RE + L L +++G
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL--L 93
Query: 64 DVTS-----EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
DV + ED +Y + G LN+ + L + + Q+L+GL+Y+HS
Sbjct: 94 DVFTPATSIEDFSEVY--LVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHS 149
Query: 119 NRVVHCDIKSRNILMAE-SGAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFA 175
++H D+K N+ + E S +I DFG A+ E + T + APE+ H
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 176 SDIWAVGCTVIEMASGGAPWP--NAADPMT------------VLYKIA------YSRELP 215
DIW+VGC + E+ G A +P + D + VL KI+ Y + LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 216 EVP----AFLSKQAN----DFLSNCLRRDPKERWAASQLLKHPFLEEF 255
+P + + + AN D L L D +R +A++ L H + ++
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAK--STELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
TIG+G V L G+ A K + FL E ++ L ++V G
Sbjct: 27 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-EASVMTQLRHSNLVQLLG-- 81
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHSNRVV 122
V E+ +Y + EY G+L D + R+ GR L ++ ++ + + +EYL N V
Sbjct: 82 VIVEEKGGLY-IVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-FMAPEVARGEHQGFASDIWA 180
H D+ +RN+L++E AK++DFG K S +G P+ + APE R + SD+W+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 199
Query: 181 VGCTVIEMAS-GGAPWP 196
G + E+ S G P+P
Sbjct: 200 FGILLWEIYSFGRVPYP 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 37 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 88
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 89 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 147
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 148 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 208 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 127/310 (40%), Gaps = 56/310 (18%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTE-----LPKSEFLQREQKFLSSLNSPHIVGYKG 62
TIG G+ VS A +G A K + ++ RE K L +I+ K
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 63 C---DVTSEDNKLMYNLF--MEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
V + K +Y + ME L+ IH + L + + Q+L+GL+Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLME----SDLHQIIH-SSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 118 SNRVVHCDIKSRNILMAES-GAKIADFGCAK--------WESEALQSGGTPMFMAPEVAR 168
S +V+H D+K N+L+ E+ KI DFG A+ + + T + APE+
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 169 GEHQGF-ASDIWAVGCTVIEMASG--------------------GAPWPNAADPMTVLYK 207
H+ A D+W+VGC EM + G P P +
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 296
Query: 208 IAYSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCT 259
AY + LP VP +QA L LR +P R +A+ L+HPFL ++
Sbjct: 297 RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 356
Query: 260 KQIQESNCSP 269
E +C+P
Sbjct: 357 ---DEPDCAP 363
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 20/244 (8%)
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGL 113
PHIV K + ME GG L I G + E R I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 114 EYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKWESE-ALQSG-GTPMFMAPEVA 167
++LHS+ + H D+K N+L ++ K+ DFG AK ++ ALQ+ TP ++APEV
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-----AYSRELPEVPAFL 221
E + D+W++G + + G P + N ++ K Y PE + +
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW-SEV 241
Query: 222 SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWN 279
S+ A + L+ DP ER +Q + HP++ + + + ++ +L D+ W+
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ----SMVVPQTPLHTARVLQEDKDHWD 297
Query: 280 SVEE 283
V+E
Sbjct: 298 EVKE 301
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 84
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 85 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 143
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 204 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 20/244 (8%)
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGL 113
PHIV K + ME GG L I G + E R I +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 114 EYLHSNRVVHCDIKSRNILMA----ESGAKIADFGCAKWESE-ALQSG-GTPMFMAPEVA 167
++LHS+ + H D+K N+L ++ K+ DFG AK ++ ALQ+ TP ++APEV
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKI-----AYSRELPEVPAFL 221
E + D+W++G + + G P + N ++ K Y PE + +
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW-SEV 260
Query: 222 SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWN 279
S+ A + L+ DP ER +Q + HP++ + + + ++ +L D+ W+
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ----SMVVPQTPLHTARVLQEDKDHWD 316
Query: 280 SVEE 283
V+E
Sbjct: 317 EVKE 320
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLNSPHIVG 59
IG+G+ V++ + VFA K L K E L+R E+ L + +S I
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKI--LNKWEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+DN L L M+Y GG L + + RL E + Y +++ ++ +H
Sbjct: 139 LHY--AFQDDNNLY--LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAK-WESEALQSG---GTPMFMAPEV------A 167
VH DIK NILM +G ++ADFG C K E +QS GTP +++PE+
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 168 RGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLY-KIAYSRELPEVPAF---LSK 223
+G + G D W++G + EM G P+ A+ + Y KI +E + P +S+
Sbjct: 255 KGRY-GPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHKERFQFPTQVTDVSE 311
Query: 224 QANDFLSN--CLRRDPKERWAASQLLKHPFL 252
A D + C R + KHPF
Sbjct: 312 NAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 43 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 94
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 153
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 214 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 37 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 88
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 89 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 147
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 148 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 208 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 84
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 85 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 143
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 204 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 33 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 84
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 85 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 143
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 204 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFA-----AKSTELPKSEFLQREQKFLSSLNSPH 56
D++ IG+G V +G ++A K ++ + E L ++ + SL S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ C + + ++ GG L+ + ++G E+ + Y +I+ GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHM 308
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFG--CAKWESEALQSGGTPMFMAPEV-ARGEHQ 172
H+ VV+ D+K NIL+ E G +I+D G C + + S GT +MAPEV +G
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 173 GFASDIWAVGCTVIEMASGGAPW-------PNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
++D +++GC + ++ G +P+ + D MT+ + E+P S +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------ELPDSFSPEL 421
Query: 226 NDFLSNCLRRDPKERW-----AASQLLKHPFL 252
L L+RD R A ++ + PF
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFA-----AKSTELPKSEFLQREQKFLSSLNSPH 56
D++ IG+G V +G ++A K ++ + E L ++ + SL S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ C + + ++ GG L+ + ++G E+ + Y +I+ GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHM 308
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFG--CAKWESEALQSGGTPMFMAPEV-ARGEHQ 172
H+ VV+ D+K NIL+ E G +I+D G C + + S GT +MAPEV +G
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 173 GFASDIWAVGCTVIEMASGGAPW-------PNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
++D +++GC + ++ G +P+ + D MT+ + E+P S +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------ELPDSFSPEL 421
Query: 226 NDFLSNCLRRDPKERW-----AASQLLKHPFL 252
L L+RD R A ++ + PF
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFA-----AKSTELPKSEFLQREQKFLSSLNSPH 56
D++ IG+G V +G ++A K ++ + E L ++ + SL S
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ C + + ++ GG L+ + ++G E+ + Y +I+ GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHM 308
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFG--CAKWESEALQSGGTPMFMAPEV-ARGEHQ 172
H+ VV+ D+K NIL+ E G +I+D G C + + S GT +MAPEV +G
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 173 GFASDIWAVGCTVIEMASGGAPW-------PNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
++D +++GC + ++ G +P+ + D MT+ + E+P S +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------ELPDSFSPEL 421
Query: 226 NDFLSNCLRRDPKERW-----AASQLLKHPFL 252
L L+RD R A ++ + PF
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 48/276 (17%)
Query: 6 GHTIGQGSSATVSLATSL----RSGDVFAA----KSTELPKSEF--LQREQKFLSSLNSP 55
G T+G+G V AT+ R+G A K P SE L E L +N P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP-SELRDLLSEFNVLKQVNHP 86
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI-----------------------HR 92
H++ G S+D L+ L +EYA G+L + H
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 93 NGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK--WE 149
+ L ++S+ QI QG++YL +VH D+ +RNIL+AE KI+DFG ++ +E
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 150 SEAL---QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV 204
++ G P+ +MA E SD+W+ G + E+ + GG P+P P
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPER 260
Query: 205 LYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
L+ + + E P S++ + C +++P +R
Sbjct: 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 29/272 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFA-----AKSTELPKSEFLQREQKFLSSLNSPH 56
D++ IG+G V +G ++A K ++ + E L ++ + SL S
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 57 IVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ C + + ++ GG L+ + ++G E+ + Y +I+ GLE++
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHM 307
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFG--CAKWESEALQSGGTPMFMAPEV-ARGEHQ 172
H+ VV+ D+K NIL+ E G +I+D G C + + S GT +MAPEV +G
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY 367
Query: 173 GFASDIWAVGCTVIEMASGGAPW-------PNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
++D +++GC + ++ G +P+ + D MT+ + E+P S +
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------ELPDSFSPEL 420
Query: 226 NDFLSNCLRRDPKERW-----AASQLLKHPFL 252
L L+RD R A ++ + PF
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI DF A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 13 SSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKL 72
S TVS+A DV + +F+ RE + SL+ +++ G +T
Sbjct: 43 SGKTVSVAVKCLKPDVLSQPEA---MDDFI-REVNAMHSLDHRNLIRLYGVVLTPP---- 94
Query: 73 MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL 132
+ E AP G+L D + ++ G + Y Q+ +G+ YL S R +H D+ +RN+L
Sbjct: 95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL 153
Query: 133 MAESG-AKIADFGCAKW-----ESEALQSGGTPMFM--APEVARGEHQGFASDIWAVGCT 184
+A KI DFG + + +Q F APE + ASD W G T
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 185 VIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ EM + G PW + +L+KI E P + + + C P++R
Sbjct: 214 LWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQK--------FLSSLN 53
D+ IG+GS V LA ++ +VF A K+ ++E+K L ++
Sbjct: 39 DFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 54 SPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGL 113
P +VG T++ KL + L +Y GG L + R L E Y +I L
Sbjct: 98 HPFLVGLHFSFQTAD--KLYFVL--DYINGGELFYHLQRERCFL-EPRARFYAAEIASAL 152
Query: 114 EYLHSNRVVHCDIKSRNILMAESGAKI-ADFGCAKWESEALQSG----GTPMFMAPEVAR 168
YLHS +V+ D+K NIL+ G + DFG K E + GTP ++APEV
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPW--PNAADPMTVLYKIAYSRELPEVPAFLSKQAN 226
+ D W +G + EM G P+ N A+ +Y ++ L P ++ A
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYDNILNKPLQLKPN-ITNSAR 267
Query: 227 DFLSNCLRRDPKERWAA 243
L L++D +R A
Sbjct: 268 HLLEGLLQKDRTKRLGA 284
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGXLLDYVREHKDNIGSQYLLN 122
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 263
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 264 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 122
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAK--STELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
TIG+G V L G+ A K + FL E ++ L ++V G
Sbjct: 18 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-EASVMTQLRHSNLVQLLG-- 72
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR--LDESLIVSYTRQILQGLEYLHSNRVV 122
V E+ +Y + EY G+L D + R+ GR L ++ ++ + + +EYL N V
Sbjct: 73 VIVEEKGGLY-IVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 123 HCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM-FMAPEVARGEHQGFASDIWA 180
H D+ +RN+L++E AK++DFG K S +G P+ + APE R SD+W+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 181 VGCTVIEMAS-GGAPWP 196
G + E+ S G P+P
Sbjct: 191 FGILLWEIYSFGRVPYP 207
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A R A K P + RE + L L +++G
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL--L 85
Query: 64 DVTS-----EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHS 118
DV + ED +Y + G LN+ + L + + Q+L+GL+Y+HS
Sbjct: 86 DVFTPATSIEDFSEVY--LVTTLMGADLNNIVKCQA--LSDEHVQFLVYQLLRGLKYIHS 141
Query: 119 NRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSG-GTPMFMAPEVARG-EHQGFA 175
++H D+K N+ + E +I DFG A+ E + T + APE+ H
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 176 SDIWAVGCTVIEMASGGAPWP--NAADPMT------------VLYKIA------YSRELP 215
DIW+VGC + E+ G A +P + D + VL KI+ Y + LP
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 216 EVP----AFLSKQAN----DFLSNCLRRDPKERWAASQLLKHPFLEEF 255
+P + + + AN D L L D +R +A++ L H + ++
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 309
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 322
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 265
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 266 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 268
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 269 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 125
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP-KSEFL----QREQKFLSSLNSPHIVGYKGC 63
+G G+ V A R+G A K P +SE RE + L + +++G
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL--L 90
Query: 64 DVTSEDNKL--MYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
DV + D L + ++ GT ++ ++ +L E I Q+L+GL Y+H+ +
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 122 VHCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARGEHQGFAS-DI 178
+H D+K N+ + E KI DFG A+ +SE T + APEV + + DI
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDI 209
Query: 179 WAVGCTVIEMASGGAPWPNA--ADPMTVLYKIA------------------YSRELPEVP 218
W+VGC + EM +G + + D + + K+ Y + LPE+
Sbjct: 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE 269
Query: 219 A--FLSKQAN------DFLSNCLRRDPKERWAASQLLKHPFLE 253
F S N + L L D ++R A + L HP+ E
Sbjct: 270 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 42 LQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNG------- 94
RE + L++L HIV + G V E + L+ + EY G LN + +G
Sbjct: 62 FHREAELLTNLQHEHIVKFYG--VCVEGDPLI--MVFEYMKHGDLNKFLRAHGPDAVLMA 117
Query: 95 -----GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK- 147
L +S ++ +QI G+ YL S VH D+ +RN L+ E+ KI DFG ++
Sbjct: 118 EGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 148 -WESEALQSGGTPMF----MAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADP 201
+ ++ + GG M M PE SD+W++G + E+ + G PW ++
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237
Query: 202 MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
V+ I R L + P ++ + + C +R+P R
Sbjct: 238 -EVIECITQGRVL-QRPRTCPQEVYELMLGCWQREPHMR 274
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI FG A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ KIADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 125
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 128/307 (41%), Gaps = 57/307 (18%)
Query: 3 WTRGHTIGQGSSATVSLATS-LRSGDVFAAKSTELPKSEFLQR---EQKFLSSLNSPHIV 58
+T+ IG+G+ VS A +R V K + + QR E + L +++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEYL 116
G + + + + M ++ Y + ++++ +L I + QIL+GL+Y+
Sbjct: 105 GIRDI-LRASTLEAMRDV---YIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 117 HSNRVVHCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSG------GTPMFMAPEVAR 168
HS V+H D+K N+L+ + KI DFG A+ + E +G T + APE+
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 169 GEHQGFAS--DIWAVGCTVIEMASGGAPWP------------------------------ 196
+G+ DIW+VGC + EM S +P
Sbjct: 221 NS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMK 279
Query: 197 --NAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
N + K+A+++ P+ +A D L L +P +R + L HP+LE+
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKS----DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Query: 255 FCSCTKQ 261
+ T +
Sbjct: 336 YYDPTDE 342
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI D G A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 70
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 71 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 244
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 245 MTKCWAYDPSRRPRFTEL 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI D G A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 73
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 74 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 247
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 248 MTKCWAYDPSRRPRFTEL 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L M+ P G L D + + + +++
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTST-----VQLIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 187 VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 247 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 246 LLKH 249
L++H
Sbjct: 301 LVEH 304
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL 97
+ +FLQ E + + PHIV G V +E+ + ME G L + L
Sbjct: 55 REKFLQ-EALTMRQFDHPHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKFSL 108
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEAL--- 153
D + ++ Y Q+ L YL S R VH DI +RN+L+ A K+ DFG +++ ++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 168
Query: 154 -QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYS 211
G P+ +MAPE ASD+W G + E+ G V+ +I
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 228
Query: 212 RELPEVPAFLSKQANDFLSNCLRRDPKERWAASQL 246
LP +P ++ C DP R ++L
Sbjct: 229 ERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASG 191
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 192 GA-PWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
GA P+P V + R L E P + + + + +C +P +R S+
Sbjct: 247 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 246 LLKH 249
L++H
Sbjct: 301 LVEH 304
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWES-----EALQS 155
+VS T Q+ +G+EYL S + +H D+ +RN+L+ E+ +IADFG A+ + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGH 276
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ PA + + + +C P +R QL++
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 16/248 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAA--KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
+G G V L DV K + + EF Q Q + L+ P +V + G V
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMK-LSHPKLVKFYG--VC 72
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
S++ + + EY G L + + +G L+ S ++ + +G+ +L S++ +H D+
Sbjct: 73 SKEYPIY--IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 127 KSRNILM-AESGAKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ + K++DFG ++ + + + S GT + APEV SD+WA
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ + VL K++ L P S + +C P++
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNSEVVL-KVSQGHRLYR-PHLASDTIYQIMYSCWHELPEK 248
Query: 240 RWAASQLL 247
R QLL
Sbjct: 249 RPTFQQLL 256
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 238 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 246 LLKH 249
L++H
Sbjct: 292 LVEH 295
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 67
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 68 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 241
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 242 MTKCWAYDPSRRPRFTEL 259
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 238 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 246 LLKH 249
L++H
Sbjct: 292 LVEH 295
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 39/284 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQ-----REQKFLSSLNSPHIVGYKGC 63
+G G+ +V A ++G A K P + RE + L + +++G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 64 DVTSEDNKLMYNLFM-EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
+ + ++++ + G LN+ + +L + + QIL+GL+Y+HS ++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 123 HCDIKSRNILMAES-GAKIADFGCAKW-ESEALQSGGTPMFMAPEVARG-EHQGFASDIW 179
H D+K N+ + E KI D G A+ + E T + APE+ H DIW
Sbjct: 148 HRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 180 AVGCTVIEMASGGAPWP--NAADPMTVLYKIA------------------YSRELPEVP- 218
+VGC + E+ +G +P + D + ++ ++ Y + L ++P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 219 -----AFLSKQ--ANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
F+ A D L L D +R A+Q L H + ++
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL 97
+ +FLQ E + + PHIV G V +E+ + ME G L + L
Sbjct: 55 REKFLQ-EALTMRQFDHPHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKFSL 108
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQ-- 154
D + ++ Y Q+ L YL S R VH DI +RN+L++ + K+ DFG +++ ++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXK 168
Query: 155 --SGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYS 211
G P+ +MAPE ASD+W G + E+ G V+ +I
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 228
Query: 212 RELPEVPAFLSKQANDFLSNCLRRDPKERWAASQL 246
LP +P ++ C DP R ++L
Sbjct: 229 ERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 129 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 247 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 246 LLKH 249
L++H
Sbjct: 301 LVEH 304
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 72
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 73 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 246
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 247 MTKCWAYDPSRRPRFTEL 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE--LPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V E + + +F++ E + + L+ P +V G +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLE 76
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
L++ FME+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 77 QAPICLVFE-FMEH---GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C R P++
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWRERPED 250
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 251 RPAFSRLLRQ 260
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 238 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 246 LLKH 249
L++H
Sbjct: 292 LVEH 295
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+I+ K T E N + +F + G L D + L E R +L+ +
Sbjct: 84 PNIIQLKD---TYETNTFFFLVF-DLMKKGELFDYLTEKVT-LSEKETRKIMRALLEVIC 138
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFG--CAKWESEALQSG-GTPMFMAPEVAR-- 168
LH +VH D+K NIL+ + K+ DFG C E L+S GTP ++APE+
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 169 --GEHQGFAS--DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFL 221
H G+ D+W+ G + + +G P+ + M +L I Y PE +
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDY- 256
Query: 222 SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC 256
S D +S L P++R+ A + L HPF +++
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 98
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 99 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 272
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 273 MTKCWAYDPSRRPRFTEL 290
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 237
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 238 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 291
Query: 246 LLKH 249
L++H
Sbjct: 292 LVEH 295
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 76 LFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + GR L +V Q+ G+ Y+ +H D++S NIL+
Sbjct: 80 IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG 139
Query: 135 ESG-AKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
KIADFG A+ E A Q P+ + APE A SD+W+ G + E+
Sbjct: 140 NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 189 ASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ G P+P + VL ++ +P P ++ + +C ++DP+ER L
Sbjct: 200 VTKGRVPYPGMNN-REVLEQVERGYRMP-CPQDCPISLHELMIHCWKKDPEERPTFEYL- 256
Query: 248 KHPFLEEFCSCTK 260
FLE++ + T+
Sbjct: 257 -QSFLEDYFTATE 268
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 6 GHTIGQGSSATV-----------SLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS 54
G IG+G V +LA ++++ + S + +FLQ E + +
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQ-EALTMRQFDH 75
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
PHIV G V +E+ + ME G L + LD + ++ Y Q+ L
Sbjct: 76 PHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 115 YLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL----QSGGTPM-FMAPEVAR 168
YL S R VH DI +RN+L++ + K+ DFG +++ ++ G P+ +MAPE
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 169 GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
ASD+W G + E+ G V+ +I LP +P
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSL 249
Query: 229 LSNCLRRDPKERWAASQL 246
++ C DP R ++L
Sbjct: 250 MTKCWAYDPSRRPRFTEL 267
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 166 EFVPYKVAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 223
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASG 191
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283
Query: 192 GA-PWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
GA P+P V + R L E P + + + + +C +P +R S+
Sbjct: 284 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 337
Query: 246 LLKH 249
L++H
Sbjct: 338 LVEH 341
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL 97
+ +FLQ E + + PHIV G V +E+ + ME G L + L
Sbjct: 55 REKFLQ-EALTMRQFDHPHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKYSL 108
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL--- 153
D + ++ Y Q+ L YL S R VH DI +RN+L++ + K+ DFG +++ ++
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
Query: 154 -QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYS 211
G P+ +MAPE ASD+W G + E+ G V+ +I
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 228
Query: 212 RELPEVPAFLSKQANDFLSNCLRRDPKERWAASQL 246
LP +P ++ C DP R ++L
Sbjct: 229 ERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ +++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 75 NLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
N F+ Y P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++
Sbjct: 130 NEFVPYKP-----EDLYKDFLTLEH--LIXYSFQVAKGMEFLASRKXIHRDLAARNILLS 182
Query: 135 ESG-AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIE 187
E KI DFG A+ + + ++ G + +MAPE SD+W+ G + E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 188 MAS-GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERW 241
+ S G +P+P V + R L E P + + + + +C +P +R
Sbjct: 243 IFSLGASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
Query: 242 AASQLLKH 249
S+L++H
Sbjct: 297 TFSELVEH 304
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL 97
+ +FLQ E + + PHIV G V +E+ + ME G L + L
Sbjct: 435 REKFLQ-EALTMRQFDHPHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKFSL 488
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEAL--- 153
D + ++ Y Q+ L YL S R VH DI +RN+L+ A K+ DFG +++ ++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 154 -QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYS 211
G P+ +MAPE ASD+W G + E+ G V+ +I
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 608
Query: 212 RELPEVPAFLSKQANDFLSNCLRRDPKERWAASQL 246
LP +P ++ C DP R ++L
Sbjct: 609 ERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 289 WHAVPSQRPTFKQLVE 304
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGD-------VFAAKSTELPKS--EFLQREQKFLSSL 52
++ + +G G+ TV + G+ + + PK+ E L E ++S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD-EAYVMASV 108
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
++PH+ G +TS L + P G L D + + + ++++ QI +G
Sbjct: 109 DNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 113 LEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-TPM-FMAPE 165
+ YL R+VH D+ +RN+L+ KI DFG AK E E GG P+ +MA E
Sbjct: 164 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGGA 193
SD+W+ G TV E+ + G+
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMTFGS 251
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 115
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P ++++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 131 EFVPYKEAPEDLYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 188
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 189 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 248
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 249 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 302
Query: 246 LLKH 249
L++H
Sbjct: 303 LVEH 306
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRL 97
+ +FLQ E + + PHIV G V +E+ + ME G L + L
Sbjct: 435 REKFLQ-EALTMRQFDHPHIVKLIG--VITENPVW---IIMELCTLGELRSFLQVRKFSL 488
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEAL--- 153
D + ++ Y Q+ L YL S R VH DI +RN+L++ + K+ DFG +++ ++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 154 -QSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYS 211
G P+ +MAPE ASD+W G + E+ G V+ +I
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 608
Query: 212 RELPEVPAFLSKQANDFLSNCLRRDPKERWAASQL 246
LP +P ++ C DP R ++L
Sbjct: 609 ERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 33 STELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR 92
+TE K +F Q E K ++ ++V G +D L+Y Y P G+L D +
Sbjct: 69 TTEELKQQFDQ-EIKVMAKCQHENLVELLGFSSDGDDLCLVY----VYMPNGSLLDRLSC 123
Query: 93 NGGR--LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWE 149
G L + + G+ +LH N +H DIKS NIL+ E+ AKI+DFG A+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 150 SEALQS------GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMT 203
+ Q+ GT +MAPE RGE SDI++ G ++E+ +G +P
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALRGEITP-KSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 204 VL 205
+L
Sbjct: 243 LL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 33 STELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR 92
+TE K +F Q E K ++ ++V G +D L+Y Y P G+L D +
Sbjct: 69 TTEELKQQFDQ-EIKVMAKCQHENLVELLGFSSDGDDLCLVY----VYMPNGSLLDRLSC 123
Query: 93 NGGR--LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWE 149
G L + + G+ +LH N +H DIKS NIL+ E+ AKI+DFG A+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 150 SEALQS------GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMT 203
+ Q+ GT +MAPE RGE SDI++ G ++E+ +G +P
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALRGEITP-KSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 204 VL 205
+L
Sbjct: 243 LL 244
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 77 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 131
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 227
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE--LPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V E + + +F++ E + + L+ P +V G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLE 73
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
L++ FME+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 74 QAPICLVFE-FMEH---GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C + P++
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWKERPED 247
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 248 RPAFSRLLRQ 257
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGXLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V K + + +F++ E + + L+ P +V G +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMMKLSHPKLVQLYGVCLE 93
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
L++ FME+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 94 QAPICLVFE-FMEH---GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C + P++
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWKERPED 267
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 268 RPAFSRLLRQ 277
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASG-------------------- 191
T + APE+ +G+ DIW+VGC + EM S
Sbjct: 186 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
Query: 192 GAPWPNAADPMTVLYKIAYSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
G+P + + L Y LP +VP +A D L L +P +R
Sbjct: 245 GSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 304
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 305 EQALAHPYLEQY 316
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 159
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 220 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 277
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 278 WHAVPSQRPTFKQLVE 293
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 96 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 155
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 273
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 274 WHAVPSQRPTFKQLVE 289
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 120/288 (41%), Gaps = 51/288 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSL-------NSPHIVGYK 61
+G+G+ A V A SL++G +A K E R + + +L N ++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF- 79
Query: 62 GCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRV 121
ED+ Y +F E GG++ I + +E R + L++LH+ +
Sbjct: 80 -----FEDDTRFYLVF-EKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLHTKGI 132
Query: 122 VHCDIKSRNILMAE----SGAKIADF----------GCAKWESEALQSG-GTPMFMAPEV 166
H D+K NIL S KI DF C + L + G+ +MAPEV
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 167 AR--GEHQGFAS---DIWAVGCTVIEMASGGAP----------WPNAADPMTVLYKIAYS 211
+ F D+W++G + M SG P W K+ S
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 252
Query: 212 -----RELPEVP-AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
E P+ A +S +A D +S L RD K+R +A+Q+L+HP+++
Sbjct: 253 IQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 184 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
Query: 210 YSRELPEVPAFLSKQAN--------------------------DFLSNCLRRDPKERWAA 243
S E ++ ++ +A D L L +P +R
Sbjct: 243 GSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 302
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 303 EQALAHPYLEQY 314
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 163
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 224 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 281
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 282 WHAVPSQRPTFKQLVE 297
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 64 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 118
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 179 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 162
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 223 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 280
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 281 WHAVPSQRPTFKQLVE 296
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASG-------------------- 191
T + APE+ +G+ DIW+VGC + EM S
Sbjct: 186 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
Query: 192 GAPWPNAADPMTVLYKIAYSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
G+P + + L Y LP +VP +A D L L +P +R
Sbjct: 245 GSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 304
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 305 EQALAHPYLEQY 316
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQS 155
+VS Q+ +G+EYL S + +H D+ +RN+L+ E KIADFG A+ + +
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 156 GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
G P+ +MAPE SD+W+ G + E+ + GG+P+P P+ L+K+
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGH 310
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
+ P+ + + + +C P +R QL++
Sbjct: 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 22/184 (11%)
Query: 79 EYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG- 137
E+ P T D ++++ L+ ++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E
Sbjct: 130 EFVPYKTPED-LYKDFLTLEH--LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 138 AKIADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS- 190
KI DFG A+ + + ++ G + +MAPE SD+W+ G + E+ S
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 191 GGAPWPNAADPMTVLYKIAYSRELPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQ 245
G +P+P V + R L E P + + + + +C +P +R S+
Sbjct: 247 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE 300
Query: 246 LLKH 249
L++H
Sbjct: 301 LVEH 304
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 73 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 127
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE--LPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V E + + +F++ E + + L+ P +V G V
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYG--VC 72
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
E + L E+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 73 LEQAPIC--LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C R P++
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWRERPED 248
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 249 RPAFSRLLRQ 258
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 289 WHAVPSQRPTFKQLVE 304
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 107 RQILQGLEYLHSNR-VVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSG--GTPMFM 162
+ +L Y+H+ + + H D+K NILM ++G K++DFG +++ + G GT FM
Sbjct: 158 KSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFM 217
Query: 163 APEVARGE--HQGFASDIWAVGCTVIEMASGGAPW---------------PNAADPMT-- 203
PE E + G DIW++G + M P+ N P+
Sbjct: 218 PPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRN 277
Query: 204 -VLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
LY + +++ FLS + DFL LR++P ER + LKH +L
Sbjct: 278 HFLYPLT-NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 289 WHAVPSQRPTFKQLVE 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G +P+P V + R
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFXRR 259
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 92 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 146
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 76 LFMEYAPGGTLNDEI---------------HRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+ +EYA G L + + H +L +VS Q+ +G+EYL S +
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 121 VVHCDIKSRNILMAESGA-KIADFGCAK-----WESEALQSGGTPM-FMAPEVARGEHQG 173
+H D+ +RN+L+ E KIADFG A+ + +G P+ +MAPE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SD+W+ G + E+ + GG+P+P P+ L+K+ + P+ + + + +C
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 288
Query: 233 LRRDPKERWAASQLLK 248
P +R QL++
Sbjct: 289 WHAVPSQRPTFKQLVE 304
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE--LPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V E + + +F++ E + + L+ P +V G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLE 73
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
L++ FME+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 74 QAPICLVFE-FMEH---GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 129
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C + P++
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWKERPED 247
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 248 RPAFSRLLRQ 257
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 47/287 (16%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF---LQREQKFLSSLNSPHIVGYKGCD 64
+G+G+ A V +L + +A K E + RE + L V
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIH--RNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
ED + L E GG++ IH R+ L+ S++V + + L++LH+ +
Sbjct: 80 FEEEDR---FYLVFEKMRGGSILSHIHKRRHFNELEASVVV---QDVASALDFLHNKGIA 133
Query: 123 HCDIKSRNILMAE----SGAKIADFG----------CAKWES-EALQSGGTPMFMAPEVA 167
H D+K NIL S KI DFG C+ + E L G+ +MAPEV
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 168 RGEHQGFA-----SDIWAVGCTVIEMASGGAPWPN---------------AADPMTVLYK 207
+ + D+W++G + + SG P+ A M
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 208 IAYSRELPEVP-AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
E P+ A +S A D +S L RD K+R +A+Q+L+HP+++
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ +++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 194 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 252
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 253 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 312
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 313 EQALAHPYLEQY 324
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 186 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 245 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 304
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 305 EQALAHPYLEQY 316
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTE--LPKSEFLQREQKFLSSLNSPHIVGYKGCDVT 66
IG G V L L V E + + +F++ E + + L+ P +V G +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLE 71
Query: 67 SEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDI 126
L++ FME+ G L+D + G ++ + +G+ YL V+H D+
Sbjct: 72 QAPICLVFE-FMEH---GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 127 KSRNILMAESGA-KIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQGFASDIWA 180
+RN L+ E+ K++DFG ++ + + S GT + +PEV SD+W+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 181 VGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKE 239
G + E+ S G P+ N ++ V+ I+ L + P S +++C + P++
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNS-EVVEDISTGFRLYK-PRLASTHVYQIMNHCWKERPED 245
Query: 240 RWAASQLLKH 249
R A S+LL+
Sbjct: 246 RPAFSRLLRQ 255
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+I+ K T E N + +F + G L D + L E R +L+ +
Sbjct: 71 PNIIQLKD---TYETNTFFFLVF-DLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVIC 125
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFG--CAKWESEALQSG-GTPMFMAPEVAR-- 168
LH +VH D+K NIL+ + K+ DFG C E L+ GTP ++APE+
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 169 --GEHQGFAS--DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFL 221
H G+ D+W+ G + + +G P+ + M +L I Y PE +
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDY- 243
Query: 222 SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEF 255
S D +S L P++R+ A + L HPF +++
Sbjct: 244 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 186 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 245 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 304
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 305 EQALAHPYLEQY 316
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 186 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 244
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 245 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 304
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 305 EQALAHPYLEQY 316
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 206 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 265 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 324
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 325 EQALAHPYLEQY 336
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ +++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EXVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 33 STELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR 92
+TE K +F Q E K ++ ++V G +D L+Y Y P G+L D +
Sbjct: 63 TTEELKQQFDQ-EIKVMAKCQHENLVELLGFSSDGDDLCLVY----VYMPNGSLLDRLSC 117
Query: 93 NGGR--LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWE 149
G L + + G+ +LH N +H DIKS NIL+ E+ AKI+DFG A+
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 150 SEALQS------GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMT 203
+ Q GT +MAPE RGE SDI++ G ++E+ +G +P
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALRGEITP-KSDIYSFGVVLLEIITGLPAVDEHREPQL 236
Query: 204 VL 205
+L
Sbjct: 237 LL 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 206 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 265 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 324
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 325 EQALAHPYLEQY 336
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 55 PHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLE 114
P+I+ K T E N + +F + G L D + L E R +L+ +
Sbjct: 84 PNIIQLKD---TYETNTFFFLVF-DLMKKGELFDYLTEKVT-LSEKETRKIMRALLEVIC 138
Query: 115 YLHSNRVVHCDIKSRNILMAES-GAKIADFG--CAKWESEALQSG-GTPMFMAPEVAR-- 168
LH +VH D+K NIL+ + K+ DFG C E L+ GTP ++APE+
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 169 --GEHQGFAS--DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA---YSRELPEVPAFL 221
H G+ D+W+ G + + +G P+ + M +L I Y PE +
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWDDY- 256
Query: 222 SKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC 256
S D +S L P++R+ A + L HPF +++
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 191 EXVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 250 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 309
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 310 EQALAHPYLEQY 321
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 184 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 242
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 243 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 302
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 303 EQALAHPYLEQY 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 191 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 249
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 250 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 309
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 310 EQALAHPYLEQY 321
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 188 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 247 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 307 EQALAHPYLEQY 318
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLND-EIHRNGG------R 96
RE L L P+++ + ++ D K+ L +YA + + HR +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVW--LLFDYAEHDLWHIIKFHRASKANKKPVQ 124
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-----AKIADFGCAKWESE 151
L ++ S QIL G+ YLH+N V+H D+K NIL+ G KIAD G A+ +
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 152 ALQSGG-------TPMFMAPEVARG-EHQGFASDIWAVGCTVIEMAS 190
L+ T + APE+ G H A DIWA+GC E+ +
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 192 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 250
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 251 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 310
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 311 EQALAHPYLEQY 322
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 183 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 241
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 242 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 301
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 302 EQALAHPYLEQY 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 248
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308
Query: 244 SQLLKHPFLEEF 255
Q L HP+LE++
Sbjct: 309 EQALAHPYLEQY 320
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 46 QKFLSSLNSPHIVG-YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
++FL+ + P IV + + T + + MEY G +L G +L + ++
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQKLPVAEAIA 186
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAKIADFGCAKWESEALQSGGTPMFMAP 164
Y +IL L YLHS +V+ D+K NI++ E K+ D G + GTP F AP
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAP 246
Query: 165 EVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQ 224
E+ R A+DI+ VG T+ + + P N Y LPE L +
Sbjct: 247 EIVR-TGPTVATDIYTVGRTLAAL-TLDLPTRNG----------RYVDGLPEDDPVL--K 292
Query: 225 ANDFLSNCLRR----DPKERWAASQ 245
D LRR DP++R+ ++
Sbjct: 293 TYDSYGRLLRRAIDPDPRQRFTTAE 317
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 49 LSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR 107
+ SL+ HIV G C +S L +Y P G+L D + ++ G L L++++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 140
Query: 108 QILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQS-GGTPM- 160
QI +G+ YL + +VH ++ +RN+L+ + S ++ADFG A + + L S TP+
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 161 FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
+MA E SD+W+ G TV E+ + GA
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 233
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 49 LSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTR 107
+ SL+ HIV G C +S L +Y P G+L D + ++ G L L++++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122
Query: 108 QILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQS-GGTPM- 160
QI +G+ YL + +VH ++ +RN+L+ + S ++ADFG A + + L S TP+
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 161 FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
+MA E SD+W+ G TV E+ + GA
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 215
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 200 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 259
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G +P+P V + R
Sbjct: 260 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFCRR 313
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 193 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 252
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G +P+P V + R
Sbjct: 253 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFCRR 306
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 195 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 254
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G +P+P V + R
Sbjct: 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFCRR 308
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S GA P+P V + R
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFCRR 259
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ Y+ Q+ +G+E+L S + +H D+ +RNIL++E KI DFG A+ + + ++ G
Sbjct: 202 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 261
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G +P+P V + R
Sbjct: 262 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------VKIDEEFCRR 315
Query: 214 LPE-----VPAFLSKQANDFLSNCLRRDPKERWAASQLLKH 249
L E P + + + + +C +P +R S+L++H
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 64/208 (30%)
Query: 106 TRQILQGLEYLHSN-RVVHCDIKSRNILMAESGA-------KIADFGCAKWESEAL-QSG 156
++Q+L GL+Y+H ++H DIK N+LM + KIAD G A W E S
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------GAPWPNAADPMTVLYKI 208
T + +PEV G G +DIW+ C + E+ +G G + D + + ++
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 209 AYSRELPEVPAFL------------------------------------------SKQAN 226
L E+P++L +K+ +
Sbjct: 257 -----LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFLEE 254
DFLS L+ DP++R A L+ HP+L++
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 64/208 (30%)
Query: 106 TRQILQGLEYLHSN-RVVHCDIKSRNILMAESGA-------KIADFGCAKWESEAL-QSG 156
++Q+L GL+Y+H ++H DIK N+LM + KIAD G A W E S
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 196
Query: 157 GTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------GAPWPNAADPMTVLYKI 208
T + +PEV G G +DIW+ C + E+ +G G + D + + ++
Sbjct: 197 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 209 AYSRELPEVPAFL------------------------------------------SKQAN 226
L E+P++L +K+ +
Sbjct: 257 -----LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311
Query: 227 DFLSNCLRRDPKERWAASQLLKHPFLEE 254
DFLS L+ DP++R A L+ HP+L++
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVS 104
E ++S+++PH+ G +TS L + P G L D + + + +++
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTST-----VQLITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW----ESEALQSGG-T 158
+ QI +G+ YL R+VH D+ +RN+L+ KI DFG AK E E GG
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 159 PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
P+ +MA E SD+W+ G TV E+ + G+
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGT-LNDEIHRNGGRLDESLI 102
RE + L+ + P+I+G + V E+ M+ L++ T L IH + I
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPA-MHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 103 VSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM- 160
+ IL GL LH VVH D+ NIL+A++ I DF A+ ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 161 --FMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWPNAA--DPMTVLYKIAYSREL 214
+ APE+ + +GF D+W+ GC + EM + A + + + + + ++ + ++
Sbjct: 197 RWYRAPELVM-QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAA 243
+V F S A D+L N L P W A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTA 284
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ S KI DFG A+ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 188 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 247 GSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 244 SQLLKHPFLEEF 255
Q L HP+L ++
Sbjct: 307 EQALAHPYLAQY 318
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 44 REQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGT-LNDEIHRNGGRLDESLI 102
RE + L+ + P+I+G + V E+ M+ L++ T L IH + I
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPA-MHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 103 VSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGTPM- 160
+ IL GL LH VVH D+ NIL+A++ I DF A+ ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 161 --FMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWPNAA--DPMTVLYKIAYSREL 214
+ APE+ + +GF D+W+ GC + EM + A + + + + + ++ + ++
Sbjct: 197 RWYRAPELVM-QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAA 243
+V F S A D+L N L P W A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTA 284
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 32 KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIH 91
+++E + +F QRE + L+ L HIV + G V +E L+ + EY G LN +
Sbjct: 58 EASESARQDF-QREAELLTMLQHQHIVRFFG--VCTEGRPLL--MVFEYMRHGDLNRFLR 112
Query: 92 RNG--------------GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES- 136
+G G L +++ Q+ G+ YL VH D+ +RN L+ +
Sbjct: 113 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 172
Query: 137 GAKIADFGCAK--WESEALQSGGTPMF----MAPEVARGEHQGFASDIWAVGCTVIEMAS 190
KI DFG ++ + ++ + GG M M PE SD+W+ G + E+ +
Sbjct: 173 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
Query: 191 -GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
G PW ++ + I REL E P + + C +R+P++R
Sbjct: 233 YGKQPWYQLSN-TEAIDCITQGREL-ERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 36/266 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEF----------LQREQKFLSSLNSPHIV 58
IG+G V ++ V A KS L SE QRE +S+LN P+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 59 GYKGCDVTSEDNKLMYN---LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
G LM+N + ME+ P G L + + S+ + I G+EY
Sbjct: 87 KLYG---------LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 116 LHSNR--VVHCDIKSRNILM------AESGAKIADFGCAKWESEALQSG--GTPMFMAPE 165
+ + +VH D++S NI + A AK+ADFG ++ ++ SG G +MAPE
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV-SGLLGNFQWMAPE 196
Query: 166 VARGEHQGFA--SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL-PEVPAFLS 222
E + + +D ++ + + +G P+ + + L P +P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256
Query: 223 KQANDFLSNCLRRDPKERWAASQLLK 248
+ + + C DPK+R S ++K
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 36/266 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEF----------LQREQKFLSSLNSPHIV 58
IG+G V ++ V A KS L SE QRE +S+LN P+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 59 GYKGCDVTSEDNKLMYN---LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
G LM+N + ME+ P G L + + S+ + I G+EY
Sbjct: 87 KLYG---------LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 116 LHSNR--VVHCDIKSRNILM------AESGAKIADFGCAKWESEALQSG--GTPMFMAPE 165
+ + +VH D++S NI + A AK+ADFG ++ ++ SG G +MAPE
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV-SGLLGNFQWMAPE 196
Query: 166 VARGEHQGFA--SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL-PEVPAFLS 222
E + + +D ++ + + +G P+ + + L P +P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256
Query: 223 KQANDFLSNCLRRDPKERWAASQLLK 248
+ + + C DPK+R S ++K
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 32 KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIH 91
+++E + +F QRE + L+ L HIV + G V +E L+ + EY G LN +
Sbjct: 81 EASESARQDF-QREAELLTMLQHQHIVRFFG--VCTEGRPLL--MVFEYMRHGDLNRFLR 135
Query: 92 RNG--------------GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES- 136
+G G L +++ Q+ G+ YL VH D+ +RN L+ +
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 195
Query: 137 GAKIADFGCAK--WESEALQSGGTPMF----MAPEVARGEHQGFASDIWAVGCTVIEMAS 190
KI DFG ++ + ++ + GG M M PE SD+W+ G + E+ +
Sbjct: 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
Query: 191 -GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
G PW ++ + I REL E P + + C +R+P++R
Sbjct: 256 YGKQPWYQLSN-TEAIDCITQGREL-ERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYN----LFMEYAPGGTLNDEIHR--NGGRLD 98
E + + LN P++V + +V KL N L MEY GG L +++ N L
Sbjct: 62 EIQIMKKLNHPNVVSAR--EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA----KIADFGCAKWESEA-- 152
E I + I L YLH NR++H D+K NI++ KI D G AK +
Sbjct: 120 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 153 -LQSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW-PN 197
+ GT ++APE+ + D W+ G E +G P+ PN
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 45 EQKFLSSLNSPHIVGYKGCDVTSEDNKLMYN----LFMEYAPGGTLNDEIHR--NGGRLD 98
E + + LN P++V + +V KL N L MEY GG L +++ N L
Sbjct: 63 EIQIMKKLNHPNVVSAR--EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA----KIADFGCAKWESEA-- 152
E I + I L YLH NR++H D+K NI++ KI D G AK +
Sbjct: 121 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 153 -LQSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPW-PN 197
+ GT ++APE+ + D W+ G E +G P+ PN
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 32 KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIH 91
+++E + +F QRE + L+ L HIV + G V +E L+ + EY G LN +
Sbjct: 52 EASESARQDF-QREAELLTMLQHQHIVRFFG--VCTEGRPLL--MVFEYMRHGDLNRFLR 106
Query: 92 RNG--------------GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES- 136
+G G L +++ Q+ G+ YL VH D+ +RN L+ +
Sbjct: 107 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL 166
Query: 137 GAKIADFGCAK--WESEALQSGGTPMF----MAPEVARGEHQGFASDIWAVGCTVIEMAS 190
KI DFG ++ + ++ + GG M M PE SD+W+ G + E+ +
Sbjct: 167 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
Query: 191 -GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
G PW ++ + I REL E P + + C +R+P++R
Sbjct: 227 YGKQPWYQLSN-TEAIDCITQGREL-ERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 33/271 (12%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLNSPHIVG 59
IG+G+ V++ + ++A K L K E L+R E+ L + + I
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWITA 138
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D +Y L M+Y GG L + + +L E + Y +++ ++ +H
Sbjct: 139 LH---YAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEA-LQSG---GTPMFMAPEVARGEHQG 173
VH DIK N+L+ +G ++ADFG C K + +QS GTP +++PE+ + G
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 174 FAS-----DIWAVGCTVIEMASGGAPWPNAADPMTVLY-KIAYSRELPEVPAF---LSKQ 224
D W++G + EM G P+ A+ + Y KI E + P+ +S++
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSHVTDVSEE 312
Query: 225 ANDFLSN--CLRRDPKERWAASQLLKHPFLE 253
A D + C R + KH F E
Sbjct: 313 AKDLIQRLICSRERRLGQNGIEDFKKHAFFE 343
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 243
Query: 197 -------NAADPMTVLY--------KIAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 303
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 304 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 358
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--------PAFLSKQANDFLSNCL 233
P Y ++ + P+V A + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 33/271 (12%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQR--------EQKFLSSLNSPHIVG 59
IG+G+ V++ + ++A K L K E L+R E+ L + + I
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWITA 154
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
+D +Y L M+Y GG L + + +L E + Y +++ ++ +H
Sbjct: 155 LH---YAFQDENHLY-LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 120 RVVHCDIKSRNILMAESG-AKIADFG-CAKWESEA-LQSG---GTPMFMAPEVARGEHQG 173
VH DIK N+L+ +G ++ADFG C K + +QS GTP +++PE+ + G
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 174 FAS-----DIWAVGCTVIEMASGGAPWPNAADPMTVLY-KIAYSRELPEVPAF---LSKQ 224
D W++G + EM G P+ A+ + Y KI E + P+ +S++
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHEERFQFPSHVTDVSEE 328
Query: 225 ANDFLSN--CLRRDPKERWAASQLLKHPFLE 253
A D + C R + KH F E
Sbjct: 329 AKDLIQRLICSRERRLGQNGIEDFKKHAFFE 359
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRN-GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + + GG++ ++ ++ QI +G+ Y+ +H D+++ N+L++
Sbjct: 85 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS 144
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
ES KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 145 ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 189 AS-GGAPWP--NAADPMTVL---YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P AD MT L Y++ P+ + D + C + +ER
Sbjct: 205 VTYGKIPYPGRTNADVMTALSQGYRMPRVENCPD-------ELYDIMKMCWKEKAEERPT 257
Query: 243 ASQLLKHPFLEEFCSCTK 260
L L++F + T+
Sbjct: 258 FDYL--QSVLDDFYTATE 273
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ +++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VG + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 184
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VGC + EM GG +P
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 244
Query: 197 -------NAADPMTVLY--------KIAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 245 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 304
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 305 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 359
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 119/301 (39%), Gaps = 65/301 (21%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHI 57
+ R +G+G+ V A + + A K L E RE L L +I
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLH 117
+ K V +++L +L EYA L + +N + +I S+ Q++ G+ + H
Sbjct: 96 IELKS--VIHHNHRL--HLIFEYAEND-LKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH 149
Query: 118 SNRVVHCDIKSRNILMAESGA------KIADFGCAKWESEALQSGGTPM----------- 160
S R +H D+K +N+L++ S A KI DFG A+ + G P+
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-------AFGIPIRQFTHEIITLW 202
Query: 161 FMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPE--- 216
+ PE+ G H + DIW++ C EM +P ++ + L+KI LP+
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFEVLGLPDDTT 261
Query: 217 -------------VPAFLSKQANDFL------------SNCLRRDPKERWAASQLLKHPF 251
P F K L + L DP +R +A L+HP+
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 252 L 252
Sbjct: 322 F 322
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 32 KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIH 91
+ TE +E + RE + + L++P+IV G + LM L ME A GG L+ +
Sbjct: 47 QGTEKADTEEMMREAQIMHQLDNPYIVRLIG---VCQAEALM--LVMEMAGGGPLHKFLV 101
Query: 92 RNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW-- 148
+ S + Q+ G++YL VH D+ +RN+L+ AKI+DFG +K
Sbjct: 102 GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161
Query: 149 ----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPM 202
A +G P+ + APE SD+W+ G T+ E ++ G P+ P
Sbjct: 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
Query: 203 TVLY 206
+ +
Sbjct: 222 VMAF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ +++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWP---------------- 196
T + APEV G DIW+VG + EM GG +P
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
Query: 197 -------NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 39/192 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEALQSGG--- 157
I + QIL+GL+Y+HS V+H D+K N+L+ + KI DFG A+ G
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 158 ----TPMFMAPEVARGEHQGFAS--DIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA 209
T + APE+ +G+ DIW+VGC + EM S +P + D + + I
Sbjct: 188 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
Query: 210 ------------------YSRELP---EVP-----AFLSKQANDFLSNCLRRDPKERWAA 243
Y LP +VP +A D L L +P +R
Sbjct: 247 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 244 SQLLKHPFLEEF 255
Q L HP+L ++
Sbjct: 307 EQALAHPYLAQY 318
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 47/287 (16%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKSEF---LQREQKFLSSLNSPHIVGYKGCD 64
+G+G+ A V +L + +A K E + RE + L V
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIH--RNGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
ED + L E GG++ IH R+ L+ S++V + + L++LH+ +
Sbjct: 80 FEEEDR---FYLVFEKMRGGSILSHIHKRRHFNELEASVVV---QDVASALDFLHNKGIA 133
Query: 123 HCDIKSRNILMAE----SGAKIADF----------GCAKWES-EALQSGGTPMFMAPEVA 167
H D+K NIL S KI DF C+ + E L G+ +MAPEV
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 168 RGEHQGFA-----SDIWAVGCTVIEMASGGAPWPN---------------AADPMTVLYK 207
+ + D+W++G + + SG P+ A M
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 208 IAYSRELPEVP-AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLE 253
E P+ A +S A D +S L RD K+R +A+Q+L+HP+++
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 22/252 (8%)
Query: 4 TRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGC 63
R + Q + V +A + D+ A+ E EFL RE + + PH+ G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIE----EFL-REAACMKEFDHPHVAKLVGV 93
Query: 64 DVTSEDN-----KLMYNLFMEYAP--GGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYL 116
+ S ++ FM++ L I N L +V + I G+EYL
Sbjct: 94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153
Query: 117 HSNRVVHCDIKSRNILMAESGAK-IADFGCAK------WESEALQSGGTPMFMAPEVARG 169
S +H D+ +RN ++AE +ADFG ++ + + S ++A E
Sbjct: 154 SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 170 EHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
SD+WA G T+ E M G P+ + Y I +R L + P + ++ D
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR-LKQPPECM-EEVYDL 271
Query: 229 LSNCLRRDPKER 240
+ C DPK+R
Sbjct: 272 MYQCWSADPKQR 283
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 24/253 (9%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV 65
GH G +L+SG TE + +FL E + + P+++ +G V
Sbjct: 52 GHLKLPGKREIFVAIKTLKSG------YTEKQRRDFLS-EASIMGQFDHPNVIHLEGV-V 103
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
T ++ FME G+L+ + +N G+ +V R I G++YL VH D
Sbjct: 104 TKSTPVMIITEFME---NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD 160
Query: 126 IKSRNILMAESGA-KIADFGCAKWESE--------ALQSGGTPM-FMAPEVARGEHQGFA 175
+ +RNIL+ + K++DFG +++ + + G P+ + APE + A
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 220
Query: 176 SDIWAVGCTVIE-MASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
SD+W+ G + E M+ G P+ + + V+ I LP P + + +C +
Sbjct: 221 SDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQ 278
Query: 235 RDPKERWAASQLL 247
+D R Q++
Sbjct: 279 KDRNHRPKFGQIV 291
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 120/328 (36%), Gaps = 83/328 (25%)
Query: 3 WTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQRE---QKFLSSLNSPHIVG 59
++ G T+G GS V + SG FA K L + RE K L +N +V
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-LQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 60 Y--------------------------------KGCDVTSEDNKLMYNLFMEYAPGGTLN 87
Y K V NK + N+ MEY P
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL-NVIMEYVP----- 121
Query: 88 DEIH-------RNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM--AESGA 138
D +H R+G + +LI Y Q+ + + ++HS + H DIK +N+L+ ++
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 139 KIADFGCAKW---ESEALQSGGTPMFMAPEVARGEHQGFAS-DIWAVGCTVIEMASGGAP 194
K+ DFG AK ++ + + APE+ G + S D+W++GC E+ G P
Sbjct: 182 KLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL-GKP 240
Query: 195 WPNAADPMTVLYKIAYSRELP---------------EVPAFLSKQ------------AND 227
+ + L +I P P +K A D
Sbjct: 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAID 300
Query: 228 FLSNCLRRDPKERWAASQLLKHPFLEEF 255
L LR +P R + + HPF +
Sbjct: 301 LLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKS---TELPKSEFLQREQKFLSSLNSPHIV 58
D+ +GQG+ V A + +A K TE S L E L+SLN ++V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVV 65
Query: 59 GYKGC---------DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQI 109
Y T+ K + EY TL D IH RQI
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 110 LQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK-----------------WESE 151
L+ L Y+HS ++H ++K NI + ES KI DFG AK S+
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 152 ALQSG-GTPMFMAPEVARGE-HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI- 208
L S GT ++A EV G H D +++G E P+ + + +L K+
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLR 242
Query: 209 AYSRELPEVPAF---LSKQANDFLSNCLRRDPKERWAASQLL 247
+ S E P P F K + + DP +R A LL
Sbjct: 243 SVSIEFP--PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---------------GGRL 97
+ P+I+ G E +Y L +EYAP G L D + ++ L
Sbjct: 74 HHPNIINLLG---ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS- 155
++ + + +G++YL + +H D+ +RNIL+ E+ AKIADFG ++ + ++
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 156 -GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV--LYKIAY 210
G P+ +MA E SD+W+ G + E+ S GG P+ MT LY+
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAELYEKLP 245
Query: 211 SRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
E P + D + C R P ER + +Q+L
Sbjct: 246 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 70
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 71 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTFTAHAGAKFPIKWTAPES 181
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P DP V Y++ E P ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDPSQV-YELLEKDYRMERPEGCPEKV 239
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 240 YELMRACWQWNPSDR 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---------------GGRL 97
+ P+I+ G E +Y L +EYAP G L D + ++ L
Sbjct: 84 HHPNIINLLG---ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS- 155
++ + + +G++YL + +H D+ +RNIL+ E+ AKIADFG ++ + ++
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 156 -GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV--LYKIAY 210
G P+ +MA E SD+W+ G + E+ S GG P+ MT LY+
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAELYEKLP 255
Query: 211 SRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
E P + D + C R P ER + +Q+L
Sbjct: 256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 113/295 (38%), Gaps = 56/295 (18%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP-----KSEFLQREQKFLSSLNSPHIVGYKGC 63
IG G+ V A G A K P ++ RE L +N +I+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 64 ---DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
T E+ + +Y L ME L IH LD + Q+L G+++LHS
Sbjct: 90 FTPQKTLEEFQDVY-LVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAG 144
Query: 121 VVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSGG---TPMFMAPEVARGEHQGFAS 176
++H D+K NI++ ++ KI DFG A+ S T + APEV G
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENV 204
Query: 177 DIWAVGCTVIEMASG--------------------GAP---WPNAADPMTVLYK------ 207
DIW+VGC + E+ G G P + A P Y
Sbjct: 205 DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAY 264
Query: 208 --IAYSRELP--------EVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
IA+ P E + QA D LS L DP +R + + L+HP++
Sbjct: 265 PGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 70
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 71 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTXTAHAGAKFPIKWTAPES 181
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P DP V Y++ E P ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDPSQV-YELLEKDYRMERPEGCPEKV 239
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 240 YELMRACWQWNPSDR 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 133/344 (38%), Gaps = 68/344 (19%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEF---LQREQKFLSSLNSPHI 57
D+ +G+G+ V AT +G++ A K E K F RE K L +I
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEY 115
+ ++ D+ +N Y + ++HR + L + I + Q L+ ++
Sbjct: 72 ITI--FNIQRPDSFENFNEV--YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 116 LHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW---------ESEALQSGGTPM----- 160
LH + V+H D+K N+L+ + K+ DFG A+ E QSG T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 161 FMAPEVA-RGEHQGFASDIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA-------- 209
+ APEV A D+W+ GC + E+ +P + + +++ I
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 210 -----------YSRELPEVPAF--------LSKQANDFLSNCLRRDPKERWAASQLLKHP 250
Y + LP PA ++ + D L L DP +R A + L+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 251 FLEEFCSCTKQIQESNCSP-------------TSILDQGIWNSV 281
+L+ + + + P T L + IWN +
Sbjct: 308 YLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 133/344 (38%), Gaps = 68/344 (19%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEF---LQREQKFLSSLNSPHI 57
D+ +G+G+ V AT +G++ A K E K F RE K L +I
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEY 115
+ ++ D+ +N Y + ++HR + L + I + Q L+ ++
Sbjct: 72 ITI--FNIQRPDSFENFNEV--YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 116 LHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW---------ESEALQSGGTPM----- 160
LH + V+H D+K N+L+ + K+ DFG A+ E QSG T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 161 FMAPEVA-RGEHQGFASDIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA-------- 209
+ APEV A D+W+ GC + E+ +P + + +++ I
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 210 -----------YSRELPEVPAF--------LSKQANDFLSNCLRRDPKERWAASQLLKHP 250
Y + LP PA ++ + D L L DP +R A + L+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 251 FLEEFCSCTKQIQESNCSP-------------TSILDQGIWNSV 281
+L+ + + + P T L + IWN +
Sbjct: 308 YLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 30/256 (11%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + + A K+ + + EFL +E + + P++V
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 91
Query: 59 GYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYL 116
G C + + + EY P G L D + N + +++ QI +EYL
Sbjct: 92 QLLGVCTLEPP-----FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 117 HSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPE 165
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPE 201
Query: 166 VARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQ 224
SD+WA G + E+A+ G +P+P ++ +Y + E P +
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYDLLEKGYRMEQPEGCPPK 259
Query: 225 ANDFLSNCLRRDPKER 240
+ + C + P +R
Sbjct: 260 VYELMRACWKWSPADR 275
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 133/344 (38%), Gaps = 68/344 (19%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEF---LQREQKFLSSLNSPHI 57
D+ +G+G+ V AT +G++ A K E K F RE K L +I
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 58 VGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR--NGGRLDESLIVSYTRQILQGLEY 115
+ ++ D+ +N Y + ++HR + L + I + Q L+ ++
Sbjct: 72 ITI--FNIQRPDSFENFNEV--YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 116 LHSNRVVHCDIKSRNILM-AESGAKIADFGCAKW---------ESEALQSG-----GTPM 160
LH + V+H D+K N+L+ + K+ DFG A+ E QSG T
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 161 FMAPEVA-RGEHQGFASDIWAVGCTVIEMASGGAPWP--NAADPMTVLYKIA-------- 209
+ APEV A D+W+ GC + E+ +P + + +++ I
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 210 -----------YSRELPEVPAF--------LSKQANDFLSNCLRRDPKERWAASQLLKHP 250
Y + LP PA ++ + D L L DP +R A + L+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 251 FLEEFCSCTKQIQESNCSP-------------TSILDQGIWNSV 281
+L+ + + + P T L + IWN +
Sbjct: 308 YLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 24/264 (9%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS-PHIVGYKGCDVTS 67
+G+GS + +S FA K Q+E L P+IV K +V
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIV--KLHEVFH 76
Query: 68 EDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIK 127
+ +L L ME GG L + I + E+ R+++ + ++H VVH D+K
Sbjct: 77 D--QLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 128 SRNILMAESG----AKIADFGCAKWESEALQSGGTPMFM----APEVARGEHQGFASDIW 179
N+L + KI DFG A+ + Q TP F APE+ + D+W
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 180 AVGCTVIEMASGGAPW---------PNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLS 230
++G + M SG P+ +A + M + K +S E E +S++A D +
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE-GEAWKNVSQEAKDLIQ 252
Query: 231 NCLRRDPKERWAASQLLKHPFLEE 254
L DP +R S L + +L++
Sbjct: 253 GLLTVDPNKRLKMSGLRYNEWLQD 276
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 36/266 (13%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEF----------LQREQKFLSSLNSPHIV 58
IG+G V ++ V A KS L SE QRE +S+LN P+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 59 GYKGCDVTSEDNKLMYN---LFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEY 115
G LM+N + ME+ P G L + + S+ + I G+EY
Sbjct: 87 KLYG---------LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 116 LHSNR--VVHCDIKSRNILM------AESGAKIADFGCAKWESEALQSG--GTPMFMAPE 165
+ + +VH D++S NI + A AK+ADF ++ ++ SG G +MAPE
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV-SGLLGNFQWMAPE 196
Query: 166 VARGEHQGFA--SDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSREL-PEVPAFLS 222
E + + +D ++ + + +G P+ + + L P +P
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256
Query: 223 KQANDFLSNCLRRDPKERWAASQLLK 248
+ + + C DPK+R S ++K
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 303 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 303 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 70
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + + +E+ G L D + N + +++ QI +EYL
Sbjct: 71 QLLGV-CTREPP---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTXTAHAGAKFPIKWTAPES 181
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P DP V Y++ E P ++
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDPSQV-YELLEKDYRMERPEGCPEKV 239
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 240 YELMRACWQWNPSDR 254
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 175
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 296 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 350
Query: 294 S 294
Sbjct: 351 K 351
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 74
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 75 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAPAGAKFPIKWTAPES 185
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 243
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 244 YELMRACWQWNPSDR 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 73
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 74 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAPAGAKFPIKWTAPES 184
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 242
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 243 YELMRACWQWNPSDR 257
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 77
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 78 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 188
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 246
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 247 YELMRACWQWNPSDR 261
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 74
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 75 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 185
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 243
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 244 YELMRACWQWNPSDR 258
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 112/298 (37%), Gaps = 62/298 (20%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELP-----KSEFLQREQKFLSSLNSPHIVGYKGC 63
IG G+ V A G A K P ++ RE L +N +I+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 64 ---DVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
T E+ + +Y L ME L IH LD + Q+L G+++LHS
Sbjct: 92 FTPQKTLEEFQDVY-LVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 121 VVHCDIKSRNILM-AESGAKIADFGCAKWESEALQSGG---TPMFMAPEVARGEHQGFAS 176
++H D+K NI++ ++ KI DFG A+ T + APEV G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANV 206
Query: 177 DIWAVGCTVIEMASG--------------------GAPWPNAADPMTVLYKIA--YSREL 214
DIW+VGC + E+ G G P +A+ M L Y
Sbjct: 207 DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP---SAEFMAALQPTVRNYVENR 263
Query: 215 PEVPA--------------------FLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P+ P + QA D LS L DP +R + + L+HP++
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 85
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 86 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 196
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 254
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 255 YELMRACWQWNPSDR 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 74
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 75 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 185
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 243
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 244 YELMRACWQWNPSDR 258
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 73 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 77
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 78 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTXTAHAGAKFPIKWTAPES 188
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 246
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 247 YELMRACWQWNPSDR 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 76
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 77 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 187
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 245
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 246 YELMRACWQWNPSDR 260
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 127/322 (39%), Gaps = 89/322 (27%)
Query: 8 TIGQGSS--ATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGY 60
IG+G TV+LA +G+ + L FLQ E N P+IV Y
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 61 KGCDVTSEDNKL-MYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLH 117
+ + DN+L + FM Y G+ D I H G ++E I + +L+ L+Y+H
Sbjct: 76 RATFIA--DNELWVVTSFMAY---GSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIH 129
Query: 118 SNRVVHCDIKSRNILMAESGAK--------------------IADFGCAKWESEALQSGG 157
VH +K+ +IL++ G + DF K+ + L
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF--PKYSVKVLP--- 184
Query: 158 TPMFMAPEVARGEHQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI------- 208
+++PEV + QG+ SDI++VG T E+A+G P+ + +L K+
Sbjct: 185 ---WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 241
Query: 209 -------------AYSREL---------------------PEVPAF--LSKQANDFLSNC 232
+ SR + P P S + F+ C
Sbjct: 242 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC 301
Query: 233 LRRDPKERWAASQLLKHPFLEE 254
L+R+P R +AS LL H F ++
Sbjct: 302 LQRNPDARPSASTLLNHSFFKQ 323
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 77
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 78 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 188
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 246
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 247 YELMRACWQWNPSDR 261
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 73 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 127/322 (39%), Gaps = 89/322 (27%)
Query: 8 TIGQGSS--ATVSLATSLRSGDVFAAKSTELPKSE-----FLQREQKFLSSLNSPHIVGY 60
IG+G TV+LA +G+ + L FLQ E N P+IV Y
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 61 KGCDVTSEDNKL-MYNLFMEYAPGGTLNDEI--HRNGGRLDESLIVSYTRQILQGLEYLH 117
+ + DN+L + FM Y G+ D I H G ++E I + +L+ L+Y+H
Sbjct: 92 RATFIA--DNELWVVTSFMAY---GSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIH 145
Query: 118 SNRVVHCDIKSRNILMAESGAK--------------------IADFGCAKWESEALQSGG 157
VH +K+ +IL++ G + DF K+ + L
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDF--PKYSVKVLP--- 200
Query: 158 TPMFMAPEVARGEHQGF--ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKI------- 208
+++PEV + QG+ SDI++VG T E+A+G P+ + +L K+
Sbjct: 201 ---WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257
Query: 209 -------------AYSREL---------------------PEVPAF--LSKQANDFLSNC 232
+ SR + P P S + F+ C
Sbjct: 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC 317
Query: 233 LRRDPKERWAASQLLKHPFLEE 254
L+R+P R +AS LL H F ++
Sbjct: 318 LQRNPDARPSASTLLNHSFFKQ 339
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 54/310 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLS-SLNSPHIVGYKGCDVTS 67
+G GSS TV S + G A K + + E K L+ S + P+++ Y + T
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT- 98
Query: 68 EDNKLMY------NL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
++ +Y NL + ++DE N E +S RQI G+ +LHS +
Sbjct: 99 --DRFLYIALELCNLNLQDLVESKNVSDE---NLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 121 VVHCDIKSRNILMA---------ESGAK-----IADFG-CAKWESEAL-------QSGGT 158
++H D+K +NIL++ ++GA+ I+DFG C K +S GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 159 PMFMAPEV---ARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSREL 214
+ APE+ + + DI+++GC + S G P+ + + + + +S L
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS--L 271
Query: 215 PEVPAF----LSKQANDFLSNCLRRDPKERWAASQLLKHPF-------LEEFCSCTKQIQ 263
E+ L +A D +S + DP +R A ++L+HP LE + +++
Sbjct: 272 DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLE 331
Query: 264 ESNCSPTSIL 273
N P S L
Sbjct: 332 IENRDPPSAL 341
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 24/294 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 78
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 124 CDIKSRNILMAESGA----KIADFGCAKW---ESEALQSGGTPMFMAPEVARGEHQGFAS 176
D+K N+L K+ DFG AK + + TP ++APEV E +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 177 DIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLSN 231
D+W++G + + G P + N ++ K E P + +S++ + N
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 232 CLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 308
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 54/310 (17%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLS-SLNSPHIVGYKGCDVTS 67
+G GSS TV S + G A K + + E K L+ S + P+++ Y + T
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT- 98
Query: 68 EDNKLMY------NL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
++ +Y NL + ++DE N E +S RQI G+ +LHS +
Sbjct: 99 --DRFLYIALELCNLNLQDLVESKNVSDE---NLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 121 VVHCDIKSRNILMA---------ESGAK-----IADFG-CAKWESEAL-------QSGGT 158
++H D+K +NIL++ ++GA+ I+DFG C K +S GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 159 PMFMAPEV---ARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSREL 214
+ APE+ + + DI+++GC + S G P+ + + + + +S L
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS--L 271
Query: 215 PEVPAF----LSKQANDFLSNCLRRDPKERWAASQLLKHPF-------LEEFCSCTKQIQ 263
E+ L +A D +S + DP +R A ++L+HP LE + +++
Sbjct: 272 DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLE 331
Query: 264 ESNCSPTSIL 273
N P S L
Sbjct: 332 IENRDPPSAL 341
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 79
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 80 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 198
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 199 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 258
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 259 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 309
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 73 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 78
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 197
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 257
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 258 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 308
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 32 KSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIH 91
+ TE +E + RE + + L++P+IV G + LM L ME A GG L+ +
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIG---VCQAEALM--LVMEMAGGGPLHKFLV 427
Query: 92 RNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKW-- 148
+ S + Q+ G++YL VH ++ +RN+L+ AKI+DFG +K
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 149 ----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPM 202
A +G P+ + APE SD+W+ G T+ E ++ G P+ P
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
Query: 203 TVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
+ + I + + E P + +S+C
Sbjct: 548 VMAF-IEQGKRM-ECPPECPPELYALMSDC 575
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGI 277
A + ++HP+ F K+ Q C+ ++L G+
Sbjct: 313 LTAREAMEHPY---FYPVVKE-QSQPCADNAVLSSGL 345
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 8 TIGQGSSATVSLATSLRSGDVFAAKSTELPKS-EFLQREQKFL-SSLNSPHIVGYKGCDV 65
+G G+ T+ + DV A LP+ F RE + L S P+++ Y
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDV--AVKRILPECFSFADREVQLLRESDEHPNVIRYF---C 85
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
T +D + Y + +E TL + + + ++ +Q GL +LHS +VH D
Sbjct: 86 TEKDRQFQY-IAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143
Query: 126 IKSRNILMAESGAK------IADFG-CAKW----ESEALQSG--GTPMFMAPEVAR---G 169
+K NIL++ A I+DFG C K S + +SG GT ++APE+
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCK 203
Query: 170 EHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDF 228
E+ + DI++ GC + S G+ P+ + + A S + A +
Sbjct: 204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAREL 263
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQ 263
+ + DP++R +A +LKHPF F S KQ+Q
Sbjct: 264 IEKMIAMDPQKRPSAKHVLKHPF---FWSLEKQLQ 295
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 73 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNS-PHIVGY 60
D+ +G+G + V A ++ + + K + K ++RE K L +L P+I+
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
D+ + L E+ N + + L + I Y +IL+ L+Y HS
Sbjct: 98 --ADIVKDPVSRTPALVFEHVN----NTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 121 VVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG---GTPMFMAPE-VARGEHQGF 174
++H D+K N+++ K + D+G A++ + + F PE + + +
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 175 ASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA--------------YSRELP----- 215
+ D+W++GC + M P+ + D L +IA Y+ EL
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 216 ----------------EVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
E +S +A DFL LR D + R A + ++HP+
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 124
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 303
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 304 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 354
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 53 NSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN---------------GGRL 97
+ P+I+ G E +Y L +EYAP G L D + ++ L
Sbjct: 81 HHPNIINLLG---ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 98 DESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQS- 155
++ + + +G++YL + +H ++ +RNIL+ E+ AKIADFG ++ + ++
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 156 -GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPMTV--LYKIAY 210
G P+ +MA E SD+W+ G + E+ S GG P+ MT LY+
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAELYEKLP 252
Query: 211 SRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
E P + D + C R P ER + +Q+L
Sbjct: 253 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 77
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + + +E+ G L D + N ++ +++ QI +EYL
Sbjct: 78 QLLGV-CTREPP---FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 188
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 246
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 247 YELMRACWQWNPSDR 261
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 33 STELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR 92
+TE K +F Q E K + ++V G +D L+Y Y P G+L D +
Sbjct: 60 TTEELKQQFDQ-EIKVXAKCQHENLVELLGFSSDGDDLCLVY----VYXPNGSLLDRL-- 112
Query: 93 NGGRLDESLIVSYTR--QILQG----LEYLHSNRVVHCDIKSRNILMAES-GAKIADFGC 145
LD + +S+ +I QG + +LH N +H DIKS NIL+ E+ AKI+DFG
Sbjct: 113 --SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGL 170
Query: 146 AKWESEALQS------GGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAA 199
A+ + Q GT + APE RGE SDI++ G ++E+ +G
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEALRGEITP-KSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 200 DPMTVL 205
+P +L
Sbjct: 230 EPQLLL 235
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 73
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + + +E+ G L D + N ++ +++ QI +EYL
Sbjct: 74 QLLGV-CTREPP---FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTXTAHAGAKFPIKWTAPES 184
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 242
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 243 YELMRACWQWNPSDR 257
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 77
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 78 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 188
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 246
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 247 YELMRACWQWNPSDR 261
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 35 ELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFME-YAPGGTLNDEIHRN 93
E PK + E LS + +I+ K D+ +N+ + L ME + G L I R+
Sbjct: 69 EDPKLGKVTLEIAILSRVEHANII--KVLDIF--ENQGFFQLVMEKHGSGLDLFAFIDRH 124
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAKWESEA 152
RLDE L RQ++ + YL ++H DIK NI++AE K+ DFG A +
Sbjct: 125 P-RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY---- 179
Query: 153 LQSG-------GTPMFMAPEVARGE-HQGFASDIWAVGCTVIEMASGGAPWPNAADPMTV 204
L+ G GT + APEV G ++G ++W++G T+ + +P
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF-------EENPFCE 232
Query: 205 LYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
L + + P P +SK+ +S L+ P+ R +L+ P++
Sbjct: 233 LEETVEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 310
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 80
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 259
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 260 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 310
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 130
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 249
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 250 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 309
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 310 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 360
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 84
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 85 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 204 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 263
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 264 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 314
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 85
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 86 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 205 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 264
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 265 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 315
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 86
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 87 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 206 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 265
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 266 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 316
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 26/295 (8%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---RREVELHWRASQCPHIVRIVDVY 94
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + ME GG L I G + E + I + ++YLHS + H
Sbjct: 95 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 213
Query: 176 SDIWAVGCTVIEMASGGAP-WPNAADPMTVLYKIAYSRELPEVP----AFLSKQANDFLS 230
D+W++G + + G P + N ++ K E P + +S++ +
Sbjct: 214 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 273
Query: 231 NCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ + HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 274 NLLKTEPTQRMTITEFMNHPWIMQ----STKVPQTPLHTSRVLKEDKERWEDVKE 324
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 29 FAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLND 88
A T+ + +FL E + + P+I+ +G V ++ +M + EY G+L+
Sbjct: 50 LKAGYTDKQRRDFLS-EASIMGQFDHPNIIHLEG--VVTKCKPVM--IITEYMENGSLDA 104
Query: 89 EIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK 147
+ +N GR +V R I G++YL VH D+ +RNIL+ + K++DFG ++
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 148 W---ESEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAA 199
+ EA + G P+ + APE ASD+W+ G + E M+ G P+ + +
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 224
Query: 200 DPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ V+ I LP P + + +C +++ +R Q++
Sbjct: 225 N-QDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIV 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 29 FAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLND 88
A T+ + +FL E + + P+I+ +G V ++ +M + EY G+L+
Sbjct: 65 LKAGYTDKQRRDFLS-EASIMGQFDHPNIIHLEG--VVTKCKPVM--IITEYMENGSLDA 119
Query: 89 EIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK 147
+ +N GR +V R I G++YL VH D+ +RNIL+ + K++DFG ++
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 148 W---ESEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAA 199
+ EA + G P+ + APE ASD+W+ G + E M+ G P+ + +
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
Query: 200 DPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ V+ I LP P + + +C +++ +R Q++
Sbjct: 240 N-QDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIV 285
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 29 FAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLND 88
A T+ + +FL E + + P+I+ +G V ++ +M + EY G+L+
Sbjct: 44 LKAGYTDKQRRDFLS-EASIMGQFDHPNIIHLEG--VVTKCKPVM--IITEYMENGSLDA 98
Query: 89 EIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAK 147
+ +N GR +V R I G++YL VH D+ +RNIL+ + K++DFG ++
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 148 W---ESEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAA 199
+ EA + G P+ + APE ASD+W+ G + E M+ G P+ + +
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 218
Query: 200 DPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ V+ I LP P + + +C +++ +R Q++
Sbjct: 219 N-QDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIV 264
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 105 YTRQILQGLEYLHSNRVVHCDIKSRNILM--AESGAKIADFGCAKWESEALQSGG----- 157
+ Q+L+GL+Y+HS V+H D+K N+ + + KI DFG A+ G
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 158 --TPMFMAPEVARGEHQGF-ASDIWAVGCTVIEMASGGAPWPNA---------ADPMTVL 205
T + +P + + A D+WA GC EM +G + A + + V+
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 206 YKIAYSRELPEVPAF------------------LSKQANDFLSNCLRRDPKERWAASQLL 247
++ L +P + +S++A DFL L P +R A + L
Sbjct: 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304
Query: 248 KHPFL 252
HP++
Sbjct: 305 SHPYM 309
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 6 GHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDV 65
GH G +L+SG TE + +FL E + + P+++ +G V
Sbjct: 26 GHLKLPGKREIFVAIKTLKSG------YTEKQRRDFLS-EASIMGQFDHPNVIHLEGV-V 77
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCD 125
T ++ FME G+L+ + +N G+ +V R I G++YL VH
Sbjct: 78 TKSTPVMIITEFME---NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRA 134
Query: 126 IKSRNILMAESGA-KIADFGCAKWESE--------ALQSGGTPM-FMAPEVARGEHQGFA 175
+ +RNIL+ + K++DFG +++ + + G P+ + APE + A
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 194
Query: 176 SDIWAVGCTVIE-MASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLR 234
SD+W+ G + E M+ G P+ + + V+ I LP P + + +C +
Sbjct: 195 SDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQ 252
Query: 235 RDPKERWAASQLL 247
+D R Q++
Sbjct: 253 KDRNHRPKFGQIV 265
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 244 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 303
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 304 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 358
Query: 294 S 294
Sbjct: 359 K 359
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 243
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 244 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 303
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 304 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 358
Query: 294 S 294
Sbjct: 359 K 359
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + + +E+ G L D + N + +++ QI +EYL
Sbjct: 73 QLLGV-CTREPP---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 72
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + + +E+ G L D + N + +++ QI +EYL
Sbjct: 73 QLLGV-CTREPP---FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H D+ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 183
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERPEGCPEKV 241
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 242 YELMRACWQWNPSDR 256
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 303 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 181
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 241
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 242 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 301
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 302 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 356
Query: 294 S 294
Sbjct: 357 K 357
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 303 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 34/206 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKST--ELPKSEF---LQREQKFLSSLNSPHIVG---- 59
IGQG+ V A ++G A K E K F RE K L L ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 60 -------YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
Y C + L+++ F E+ G L++ + + S I + +L G
Sbjct: 86 CRTKASPYNRCKASIY---LVFD-FCEHDLAGLLSNVL----VKFTLSEIKRVMQMLLNG 137
Query: 113 LEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG--------TPMFMA 163
L Y+H N+++H D+K+ N+L+ G K+ADFG A+ S A S T +
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 164 PEVARGEHQ-GFASDIWAVGCTVIEM 188
PE+ GE G D+W GC + EM
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 237 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 296
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 297 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 351
Query: 294 S 294
Sbjct: 352 K 352
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 296 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 350
Query: 294 S 294
Sbjct: 351 K 351
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 237 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 296
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 297 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 351
Query: 294 S 294
Sbjct: 352 K 352
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 220
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 193 APWP-----------NAADPMTVLYKIAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P N + + + + P+ PA + QA D LS L
Sbjct: 281 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 341 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 395
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 76 LFMEYAPGGTLNDEIHRN-GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ E+ G+L D + + G + ++ ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 318
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
S KIADFG A+ E A + P+ + APE SD+W+ G ++E+
Sbjct: 319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 189 AS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ G P+P ++P V+ + +P P ++ + + C + P+ER
Sbjct: 379 VTYGRIPYPGMSNP-EVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEER 429
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 43/199 (21%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFL 252
DP +R + L+HP++
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 76 LFMEYAPGGTLNDEIHRN-GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ E+ G+L D + + G + ++ ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 145
Query: 135 ESGA-KIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
S KIADFG A+ E A + P+ + APE SD+W+ G ++E+
Sbjct: 146 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 189 AS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
+ G P+P ++P V+ + +P P ++ + + C + P+ER
Sbjct: 206 VTYGRIPYPGMSNP-EVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEER 256
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 220
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 280
Query: 193 APWP-----------NAADPMTVLYKIAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P N + + + + P+ PA + QA D LS L
Sbjct: 281 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
DP +R + L+HP++ + E P I D+ + + E T E LI+
Sbjct: 341 VIDPAKRISVDDALQHPYINVWYDPA----EVEAPPPQIYDKQL-DEREHTIEEWKELIY 395
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 56 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 108
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 109 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 72 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 124
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 125 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 72 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 124
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 125 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 184 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + +N
Sbjct: 63 TEKQRRDFLG-EASIMGQFDHPNIIHLEG--VVTKSKPVM--IVTEYMENGSLDTFLKKN 117
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
G+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 118 DGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
EA + G P+ + APE ASD+W+ G + E+ S G
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG 224
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 136/314 (43%), Gaps = 58/314 (18%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLS-SLNSPHIVGYKGCDVTS 67
+G GSS TV S + G A K + + E K L+ S + P+++ Y + T
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT- 80
Query: 68 EDNKLMY------NL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
++ +Y NL + ++DE N E +S RQI G+ +LHS +
Sbjct: 81 --DRFLYIALELCNLNLQDLVESKNVSDE---NLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 121 VVHCDIKSRNILMA---------ESGAK-----IADFG-CAKWESEAL-------QSGGT 158
++H D+K +NIL++ ++GA+ I+DFG C K +S GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 195
Query: 159 PMFMAPEVARGEHQ-------GFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAY 210
+ APE+ + + DI+++GC + S G P+ + + + + +
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 255
Query: 211 SRELPEVPAF----LSKQANDFLSNCLRRDPKERWAASQLLKHPF-------LEEFCSCT 259
S L E+ L +A D +S + DP +R A ++L+HP LE +
Sbjct: 256 S--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVS 313
Query: 260 KQIQESNCSPTSIL 273
+++ N P S L
Sbjct: 314 DRLEIENRDPPSAL 327
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 43/199 (21%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWPNAADPMTVLYK-----------IAYSRELPE--VPA------FLSKQANDFLSNCL 233
P P + + + + + P+ PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFL 252
DP +R + L+HP++
Sbjct: 303 VIDPAKRISVDDALQHPYI 321
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 52 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 104
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 105 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 67/236 (28%)
Query: 83 GGTLNDEIHRNGG---RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES--- 136
G + D I NG RLD ++Y QI + + +LHSN++ H D+K NIL +S
Sbjct: 100 GLSTYDFIKENGFLPFRLDHIRKMAY--QICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157
Query: 137 -----------------GAKIADFGCAKWESEALQS-GGTPMFMAPEVARGEHQGFASDI 178
K+ DFG A ++ E + T + APEV D+
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDV 217
Query: 179 WAVGCTVIEMASGGAPWP--NAADPMTVLYKI---------------------------- 208
W++GC +IE G +P ++ + + ++ +I
Sbjct: 218 WSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH 277
Query: 209 -----AYSRELPEVPAFLSKQ------ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
SR + F+ Q D + L DP +R + LKHPF +
Sbjct: 278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 70 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 122
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 123 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 182 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 62 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 114
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 115 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 136/314 (43%), Gaps = 58/314 (18%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLS-SLNSPHIVGYKGCDVTS 67
+G GSS TV S + G A K + + E K L+ S + P+++ Y + T
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETT- 80
Query: 68 EDNKLMY------NL-FMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
++ +Y NL + ++DE N E +S RQI G+ +LHS +
Sbjct: 81 --DRFLYIALELCNLNLQDLVESKNVSDE---NLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 121 VVHCDIKSRNILMA---------ESGAK-----IADFG-CAKWES-------EALQSGGT 158
++H D+K +NIL++ ++GA+ I+DFG C K +S GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 159 PMFMAPEVARGEHQ-------GFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAY 210
+ APE+ + + DI+++GC + S G P+ + + + + +
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 255
Query: 211 SRELPEVPAF----LSKQANDFLSNCLRRDPKERWAASQLLKHPF-------LEEFCSCT 259
S L E+ L +A D +S + DP +R A ++L+HP LE +
Sbjct: 256 S--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVS 313
Query: 260 KQIQESNCSPTSIL 273
+++ N P S L
Sbjct: 314 DRLEIENRDPPSAL 327
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 50 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 102
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 103 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 162 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 56 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 108
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 109 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 168 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 100/261 (38%), Gaps = 82/261 (31%)
Query: 71 KLMY--NLFMEYAP-GGTLNDEIHRN---GGRLDESLIVSYTRQILQGLEYLHSNRVVHC 124
K MY ++ + + P G +L + I RN G +++ I Y +IL+ L YL + H
Sbjct: 104 KFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED--IKLYCIEILKALNYLRKMSLTHT 161
Query: 125 DIKSRNILMAE--------------------------SGAKIADFGCAKWESEALQSG-G 157
D+K NIL+ + +G K+ DFGCA ++S+ S
Sbjct: 162 DLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIIN 221
Query: 158 TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGG------------------------- 192
T + APEV +SD+W+ GC + E+ +G
Sbjct: 222 TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKN 281
Query: 193 --------------------APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
WP A + + + + LP + DFL +
Sbjct: 282 MLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV--KKCLPLYKIIKHELFCDFLYSI 339
Query: 233 LRRDPKERWAASQLLKHPFLE 253
L+ DP R + ++LLKH FLE
Sbjct: 340 LQIDPTLRPSPAELLKHKFLE 360
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHC 124
VT E+ + FM A G L+ GG++ ++ ++ QI +G+ Y+ +H
Sbjct: 76 VTKEEPIYIITEFM--AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 133
Query: 125 DIKSRNILMAES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDI 178
D+++ N+L++ES KIADFG A+ E A + P+ + APE S++
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 179 WAVGCTVIEMAS-GGAPWP--NAADPMTVL---YKIAYSRELPEVPAFLSKQANDFLSNC 232
W+ G + E+ + G P+P AD M+ L Y++ P+ + D + C
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPD-------ELYDIMKMC 246
Query: 233 LRRDPKERWAASQLLKHPFLEEFCSCTK 260
+ +ER L L++F + T+
Sbjct: 247 WKEKAEERPTFDYL--QSVLDDFYTATE 272
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 42/287 (14%)
Query: 6 GHTIGQGSSATVSLATSLRSG--DVFAAKSTELPKS-------EFLQREQKFLSSLNS-P 55
G T+G G+ V AT+ G D + ++ KS E L E K +S L
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR---------NGGRLDESLIVSYT 106
+IV G + ++ + EY G L + + R +G L+ ++ ++
Sbjct: 103 NIVNLLGA--CTHGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 107 RQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGGTPM-- 160
Q+ QG+ +L S +H D+ +RN+L+ AKI DFG A+ +S + G +
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 161 -FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRELPEVP 218
+MAPE SD+W+ G + E+ S G P+P + YK+ P
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKFYKLVKDGYQMAQP 277
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS-CTKQIQE 264
AF K + C +P R P ++ CS +Q QE
Sbjct: 278 AFAPKNIYSIMQACWALEPTHR---------PTFQQICSFLQEQAQE 315
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 34/206 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKST--ELPKSEF---LQREQKFLSSLNSPHIVG---- 59
IGQG+ V A ++G A K E K F RE K L L ++V
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 60 -------YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
Y C + L+++ F E+ G L++ + + S I + +L G
Sbjct: 85 CRTKASPYNRCKGSIY---LVFD-FCEHDLAGLLSNVL----VKFTLSEIKRVMQMLLNG 136
Query: 113 LEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG--------TPMFMA 163
L Y+H N+++H D+K+ N+L+ G K+ADFG A+ S A S T +
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 164 PEVARGEHQ-GFASDIWAVGCTVIEM 188
PE+ GE G D+W GC + EM
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 42/287 (14%)
Query: 6 GHTIGQGSSATVSLATSLRSG--DVFAAKSTELPKS-------EFLQREQKFLSSLNS-P 55
G T+G G+ V AT+ G D + ++ KS E L E K +S L
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 56 HIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR---------NGGRLDESLIVSYT 106
+IV G + ++ + EY G L + + R +G L+ ++ ++
Sbjct: 111 NIVNLLGA--CTHGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 107 RQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGGTPM-- 160
Q+ QG+ +L S +H D+ +RN+L+ AKI DFG A+ +S + G +
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 161 -FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRELPEVP 218
+MAPE SD+W+ G + E+ S G P+P + YK+ P
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKFYKLVKDGYQMAQP 285
Query: 219 AFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS-CTKQIQE 264
AF K + C +P R P ++ CS +Q QE
Sbjct: 286 AFAPKNIYSIMQACWALEPTHR---------PTFQQICSFLQEQAQE 323
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 34/206 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKST--ELPKSEF---LQREQKFLSSLNSPHIVG---- 59
IGQG+ V A ++G A K E K F RE K L L ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 60 -------YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
Y C + L+++ F E+ G L++ + + S I + +L G
Sbjct: 86 CRTKASPYNRCKGSIY---LVFD-FCEHDLAGLLSNVL----VKFTLSEIKRVMQMLLNG 137
Query: 113 LEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG--------TPMFMA 163
L Y+H N+++H D+K+ N+L+ G K+ADFG A+ S A S T +
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 164 PEVARGEHQ-GFASDIWAVGCTVIEM 188
PE+ GE G D+W GC + EM
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 34/206 (16%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKST--ELPKSEF---LQREQKFLSSLNSPHIVG---- 59
IGQG+ V A ++G A K E K F RE K L L ++V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 60 -------YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQG 112
Y C + L+++ F E+ G L++ + + S I + +L G
Sbjct: 86 CRTKASPYNRCKGSIY---LVFD-FCEHDLAGLLSNVL----VKFTLSEIKRVMQMLLNG 137
Query: 113 LEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKWESEALQSGG--------TPMFMA 163
L Y+H N+++H D+K+ N+L+ G K+ADFG A+ S A S T +
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 164 PEVARGEHQ-GFASDIWAVGCTVIEM 188
PE+ GE G D+W GC + EM
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 276
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 277 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H ++ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 387
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 445
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 446 YELMRACWQWNPSDR 460
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 24/254 (9%)
Query: 5 RGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
RG G + +L+ G TE + EFL E + P+I+ +G
Sbjct: 32 RGRLKAPGKKESCVAIKTLKGG------YTERQRREFLS-EASIMGQFEHPNIIRLEGV- 83
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHC 124
VT+ ++ FME G L+ + N G+ +V R I G+ YL VH
Sbjct: 84 VTNSMPVMILTEFME---NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 125 DIKSRNILMAESGA-KIADFGCAKWESE--------ALQSGGTPM-FMAPEVARGEHQGF 174
D+ +RNIL+ + K++DFG +++ E + G P+ + APE
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTS 200
Query: 175 ASDIWAVGCTVIE-MASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCL 233
ASD W+ G + E M+ G P+ + ++ V+ I LP P + + +C
Sbjct: 201 ASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPD-CPTSLHQLMLDCW 258
Query: 234 RRDPKERWAASQLL 247
++D R Q++
Sbjct: 259 QKDRNARPRFPQVV 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 256
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 257 FDYL--RSVLEDFFTAT 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 85 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 144
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 205 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 257
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 258 FDYL--RSVLEDFFTAT 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 89 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 148
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 209 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 261
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 262 FDYL--RSVLEDFFTATE 277
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 414 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 466
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 467 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 569
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 86 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 145
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 206 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 258
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 259 FDYL--RSVLEDFFTAT 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 256
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 257 FDYL--RSVLEDFFTATE 272
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 48/240 (20%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 187
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G D+W+VGC + EM G
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 247
Query: 193 APWP---NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P P P Y ++ + P+V PA + QA D LS L
Sbjct: 248 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 307
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 308 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 362
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 318
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N ++ +++ QI +EYL
Sbjct: 319 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H ++ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 429
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 487
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 488 YELMRACWQWNPSDR 502
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G DIW+VGC + EM G
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWP-----------NAADPMTVLYKIAYSRELPEV--PA------FLSKQANDFLSNCL 233
P P N + ++ + P+V PA + QA D LS L
Sbjct: 243 TPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 92 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 151
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 212 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 264
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 265 FDYL--RSVLEDFFTATE 280
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 93 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 152
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 213 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 265
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 266 FDYL--RSVLEDFFTATE 281
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 262
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 263 FDYL--RSVLEDFFTATE 278
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 262
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 263 FDYL--RSVLEDFFTAT 277
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTE---LPKSEFLQREQKFLSSLNSPHIV 58
D T H +G G V + A K+ + + EFL +E + + P++V
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL-KEAAVMKEIKHPNLV 279
Query: 59 GYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHR-NGGRLDESLIVSYTRQILQGLEYLH 117
G T E + FM Y G L D + N + +++ QI +EYL
Sbjct: 280 QLLGV-CTREPPFYIITEFMTY---GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 118 SNRVVHCDIKSRNILMAESG-AKIADFGCAKWESEALQSGGT---------PM-FMAPEV 166
+H ++ +RN L+ E+ K+ADFG ++ L +G T P+ + APE
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSR-----LMTGDTYTAHAGAKFPIKWTAPES 390
Query: 167 ARGEHQGFASDIWAVGCTVIEMASGG-APWPNAADPMTVLYKIAYSRELPEVPAFLSKQA 225
SD+WA G + E+A+ G +P+P ++ +Y++ E P ++
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPEKV 448
Query: 226 NDFLSNCLRRDPKER 240
+ + C + +P +R
Sbjct: 449 YELMRACWQWNPSDR 463
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 38 KSEFLQREQKFLSSLNSPHIVGYKG-CDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR 96
K E L E + L++P+IV G C+ S + L ME A G LN + +N
Sbjct: 415 KDELLA-EANVMQQLDNPYIVRMIGICEAES------WMLVMEMAELGPLNKYLQQNRHV 467
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKW------E 149
D++ I+ Q+ G++YL + VH D+ +RN+L+ + AKI+DFG +K
Sbjct: 468 KDKN-IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 150 SEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
+A G P+ + APE SD+W+ G + E S G
Sbjct: 527 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 570
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 26/255 (10%)
Query: 5 RGHTIGQGSSATVSLATSLRSGDVFAAKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCD 64
RG G + +L+ G TE + EFL E + P+I+ +G
Sbjct: 34 RGRLKAPGKKESCVAIKTLKGG------YTERQRREFLS-EASIMGQFEHPNIIRLEGV- 85
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHC 124
VT+ ++ FME G L+ + N G+ +V R I G+ YL VH
Sbjct: 86 VTNSMPVMILTEFME---NGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 125 DIKSRNILMAESGA-KIADFGCAKW---------ESEALQSGGTPM-FMAPEVARGEHQG 173
D+ +RNIL+ + K++DFG +++ E+ +L G P+ + APE
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL-GGKIPIRWTAPEAIAFRKFT 201
Query: 174 FASDIWAVGCTVIE-MASGGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
ASD W+ G + E M+ G P+ + ++ V+ I LP P + + +C
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPD-CPTSLHQLMLDC 259
Query: 233 LRRDPKERWAASQLL 247
++D R Q++
Sbjct: 260 WQKDRNARPRFPQVV 274
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 256
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 257 FDYL--RSVLEDFFTAT 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 144 DTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 256
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 257 FDYL--RSVLEDFFTATE 272
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G D+W+VGC + EM G
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 236
Query: 193 APWP---NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P P P Y ++ + P+V PA + QA D LS L
Sbjct: 237 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 296
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 297 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 351
Query: 294 S 294
Sbjct: 352 K 352
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAKST---ELPKSEFLQREQKFLSSLNSPHIVGYKGCDV 65
+G+G + V L L G +A K E E QRE N P+I+ +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 66 TSEDNKLMYNLFMEYAPGGTLNDEIHR---NGGRLDESLIVSYTRQILQGLEYLHSNRVV 122
K L + + GTL +EI R G L E I+ I +GLE +H+
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156
Query: 123 HCDIKSRNILMAESGAKI-ADFG-----CAKWESE----ALQSGG----TPMFMAPEVAR 168
H D+K NIL+ + G + D G C E LQ T + APE+
Sbjct: 157 HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216
Query: 169 GEHQGFA---SDIWAVGCTVIEMASGGAPW 195
+ +D+W++GC + M G P+
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 22/198 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 94 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 153
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 214 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 266
Query: 243 ASQLLKHPFLEEFCSCTK 260
L LE+F + T+
Sbjct: 267 FDYL--RSVLEDFFTATE 282
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 48/241 (19%)
Query: 97 LDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILM-AESGAKIADFGCAKWESEALQS 155
LD + Q+L G+++LHS ++H D+K NI++ ++ KI DFG A+ +
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 156 GG---TPMFMAPEVARGEHQGFASDIWAVGCTVIEMASG--------------------G 192
T + APEV G D+W+VGC + EM G
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLG 242
Query: 193 APWP---NAADPMTVLYK--------IAYSRELPEV--PA------FLSKQANDFLSNCL 233
P P P Y ++ + P+V PA + QA D LS L
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 234 RRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESLGNLIH 293
D +R + + L+HP++ + + E+ P I D+ + + E T E LI+
Sbjct: 303 VIDASKRISVDEALQHPYINVWYDPS----EAEAPPPKIPDKQL-DEREHTIEEWKELIY 357
Query: 294 S 294
Sbjct: 358 K 358
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 76 LFMEYAPGGTLNDEIHRN-GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ E+ G+L D + + G + ++ ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 312
Query: 135 ESGA-KIADFGCAKWESEALQSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMAS-GG 192
S KIADFG A+ + + + APE SD+W+ G ++E+ + G
Sbjct: 313 ASLVCKIADFGLAR-----VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
Query: 193 APWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKER 240
P+P ++P V+ + +P P ++ + + C + P+ER
Sbjct: 368 IPYPGMSNP-EVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEER 413
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 100 SLIVSYTRQILQGLEYLHSNR--VVHCDIKSRNILM---AESGAKIADFGCA-KWESEAL 153
+L + +Q+ L +L + ++HCD+K NIL+ S KI DFG + +
Sbjct: 138 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 197
Query: 154 QSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
Q + + +PEV G A D+W++GC ++EM + G P + A+ + + KI
Sbjct: 198 QXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVDQMNKIVEVLG 256
Query: 214 LPEVPAFLSKQA 225
+P PA + QA
Sbjct: 257 IP--PAHILDQA 266
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 249 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 308
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 309 LTALEAMTHPYFQQ 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 307
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 308 LTALEAMTHPYFQQ 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 100 SLIVSYTRQILQGLEYLHSNR--VVHCDIKSRNILM---AESGAKIADFGCA-KWESEAL 153
+L + +Q+ L +L + ++HCD+K NIL+ S KI DFG + +
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 216
Query: 154 QSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
Q + + +PEV G A D+W++GC ++EM + G P + A+ + + KI
Sbjct: 217 QXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVDQMNKIVEVLG 275
Query: 214 LPEVPAFLSKQA 225
+P PA + QA
Sbjct: 276 IP--PAHILDQA 285
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 306
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 307 LTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 307
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 308 LTALEAMTHPYFQQ 321
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 19/193 (9%)
Query: 81 APGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AK 139
APG +G L+ ++ ++ Q+ QG+ +L S +H D+ +RN+L+ AK
Sbjct: 139 APGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 198
Query: 140 IADFGCAK---WESEALQSGGTPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA 193
I DFG A+ +S + G + +MAPE SD+W+ G + E+ S G
Sbjct: 199 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
Query: 194 -PWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFL 252
P+P + YK+ PAF K + C +P R P
Sbjct: 259 NPYPGIL-VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR---------PTF 308
Query: 253 EEFCS-CTKQIQE 264
++ CS +Q QE
Sbjct: 309 QQICSFLQEQAQE 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 45/217 (20%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ A +
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 193
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP 215
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 253
Query: 216 EVPAFLSK-----------------------------------QANDFLSNCLRRDPKER 240
E+ +L K +A D L LR D ++R
Sbjct: 254 ELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 313
Query: 241 WAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGI 277
A + ++HP+ F K+ Q + ++L G+
Sbjct: 314 LTAKEAMEHPY---FYPVVKE-QSQPSADNAVLSSGL 346
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 157 GTPMFMAPEVARG-EHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE+ + ++ D+W++GC M P+ D L KIA
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 210 --------YSREL-PEVPA--------------------FLSKQANDFLSNCLRRDPKER 240
Y EL P++ A +S +A DFL LR D +ER
Sbjct: 268 GLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQER 327
Query: 241 WAASQLLKHPFLEE 254
A + + HP+ ++
Sbjct: 328 LTALEAMTHPYFQQ 341
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+L+ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P++V +G V + +M + +E+ G L+ + ++
Sbjct: 84 TEKQRRDFLC-EASIMGQFDHPNVVHLEG--VVTRGKPVM--IVIEFMENGALDAFLRKH 138
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
G+ +V R I G+ YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 139 DGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 150 SEALQS---GGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA+ + G P+ + APE + ASD+W+ G + E M+ G P+ + ++ V
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDV 257
Query: 205 LYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ I LP P + + +C +++ ER Q++
Sbjct: 258 IKAIEEGYRLP-APMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 150/376 (39%), Gaps = 93/376 (24%)
Query: 9 IGQGSSATVSLATSLRSGDVFAAK--------STELPKSEFLQREQKFLSSLNSPHIVGY 60
+G+G+ V + R+G+V A K ST+ ++ RE L+ L S H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT---FREIMILTEL-SGHENIV 72
Query: 61 KGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSNR 120
+V DN L +Y L+ I N V Y Q+++ ++YLHS
Sbjct: 73 NLLNVLRADNDRDVYLVFDYMETD-LHAVIRANILEPVHKQYVVY--QLIKVIKYLHSGG 129
Query: 121 VVHCDIKSRNILM-AESGAKIADFGCAK-WESEALQSGGTPM------------------ 160
++H D+K NIL+ AE K+ADFG ++ + + + P+
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 161 ------FMAPEVARGEHQGFAS-DIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
+ APE+ G + D+W++GC + E+ G +P ++ M L +I +
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS-TMNQLERIIGVID 248
Query: 214 LP---EVPAFLS----------------KQAN--------------------------DF 228
P +V + S +Q+N D
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDL 308
Query: 229 LSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSILDQGIWNSVEETEESL 288
L L+ +P +R +A+ LKHPF+ F + +E NC I+ I ++V+ + +
Sbjct: 309 LDKLLQFNPNKRISANDALKHPFVSIFHNPN---EEPNCD--HIITIPINDNVKHSIDDY 363
Query: 289 GNLIHSTSKTSARERI 304
NL++S RE I
Sbjct: 364 RNLVYSEISRRKRELI 379
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H D+++ NIL++
Sbjct: 79 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 138
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 189 ASGG-APWPNAADPMTV 204
+ G P+P +P +
Sbjct: 199 VTHGRIPYPGMTNPEVI 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG A+ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTP 159
S++ Q+ +G+ +L S +H D+ +RNIL+ KI DFG A K +S + G
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 160 M---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPM-TVLYKIAYSREL 214
+ +MAPE F SD+W+ G + E+ S G +P+P P+ + YK+
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFR 266
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
P + D + C DP +R Q+++ +E KQI ES
Sbjct: 267 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ--LIE------KQISES 309
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 67/236 (28%)
Query: 83 GGTLNDEIHRNGG---RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES--- 136
G + D I NG RLD ++Y QI + + +LHSN++ H D+K NIL +S
Sbjct: 100 GLSTYDFIKENGFLPFRLDHIRKMAY--QICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157
Query: 137 -----------------GAKIADFGCAKWESEALQS-GGTPMFMAPEVARGEHQGFASDI 178
K+ DFG A ++ E + + APEV D+
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDV 217
Query: 179 WAVGCTVIEMASGGAPWP--NAADPMTVLYKI---------------------------- 208
W++GC +IE G +P ++ + + ++ +I
Sbjct: 218 WSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH 277
Query: 209 -----AYSRELPEVPAFLSKQ------ANDFLSNCLRRDPKERWAASQLLKHPFLE 253
SR + F+ Q D + L DP +R + LKHPF +
Sbjct: 278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTP 159
S++ Q+ +G+ +L S +H D+ +RNIL+ KI DFG A K +S + G
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 160 M---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPM-TVLYKIAYSREL 214
+ +MAPE F SD+W+ G + E+ S G +P+P P+ + YK+
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFR 284
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
P + D + C DP +R Q+++
Sbjct: 285 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTP 159
S++ Q+ +G+ +L S +H D+ +RNIL+ KI DFG A K +S + G
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 160 M---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPM-TVLYKIAYSREL 214
+ +MAPE F SD+W+ G + E+ S G +P+P P+ + YK+
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFR 282
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLK 248
P + D + C DP +R Q+++
Sbjct: 283 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 28/296 (9%)
Query: 7 HTIGQGSSATVSLATSLRSGDVFAAKSTE-LPKSEFLQREQKF-LSSLNSPHIVGYKGCD 64
+G G + V + R+ + FA K + PK+ +RE + + PHIV
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKA---RREVELHWRASQCPHIVRIVDVY 124
Query: 65 VTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGR-LDESLIVSYTRQILQGLEYLHSNRVVH 123
+ + E GG L I G + E + I + ++YLHS + H
Sbjct: 125 ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 124 CDIKSRNILMAESGA----KIADFGCAKWESEALQSGG----TPMFMAPEVARGEHQGFA 175
D+K N+L K+ DFG AK E+ + S TP ++APEV E +
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 176 SDIWAVGCTVIEMASGGAPWPN----AADP--MTVLYKIAYSRELPEVPAFLSKQANDFL 229
D W++G + G P+ + A P T + Y PE + +S++ +
Sbjct: 244 CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEW-SEVSEEVKXLI 302
Query: 230 SNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQESNCSPTSIL--DQGIWNSVEE 283
N L+ +P +R ++ HP++ + + ++ ++ + +L D+ W V+E
Sbjct: 303 RNLLKTEPTQRXTITEFXNHPWIXQ----STKVPQTPLHTSRVLKEDKERWEDVKE 354
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTP 159
S++ Q+ +G+ +L S +H D+ +RNIL+ KI DFG A K +S + G
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 160 M---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPM-TVLYKIAYSREL 214
+ +MAPE F SD+W+ G + E+ S G +P+P P+ + YK+
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFR 289
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
P + D + C DP +R Q+++ +E KQI ES
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ--LIE------KQISES 332
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ ++ Q+ QG+ +L S +H D+ +RN+L+ AKI DFG A+ +S + G
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G P+P + YK+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKFYKLVKDGY 284
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS-CTKQIQE 264
PAF K + C +P R P ++ CS +Q QE
Sbjct: 285 QMAQPAFAPKNIYSIMQACWALEPTHR---------PTFQQICSFLQEQAQE 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 311 LTAREAMEHPYF 322
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ ++ Q+ QG+ +L S +H D+ +RN+L+ AKI DFG A+ +S + G
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G P+P + YK+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKFYKLVKDGY 284
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCS-CTKQIQE 264
PAF K + C +P R P ++ CS +Q QE
Sbjct: 285 QMAQPAFAPKNIYSIMQACWALEPTHR---------PTFQQICSFLQEQAQE 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 311
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 312 LTAREAMEHPYF 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 311
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 312 LTAREAMEHPYF 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 104 SYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCA---KWESEALQSGGTP 159
S++ Q+ +G+ +L S +H D+ +RNIL+ KI DFG A K +S + G
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 160 M---FMAPEVARGEHQGFASDIWAVGCTVIEMAS-GGAPWPNAADPM-TVLYKIAYSREL 214
+ +MAPE F SD+W+ G + E+ S G +P+P P+ + YK+
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM--PVDSKFYKMIKEGFR 289
Query: 215 PEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFCSCTKQIQES 265
P + D + C DP +R Q+++ +E KQI ES
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ--LIE------KQISES 332
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y +IL+ L+Y HS ++H D+K N+++ K + D+G A++ +
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 197
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA------ 209
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 198 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 257
Query: 210 --------YSRELP---------------------EVPAFLSKQANDFLSNCLRRDPKER 240
Y+ EL E +S +A DFL LR D + R
Sbjct: 258 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 317
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 318 LTAREAMEHPYF 329
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ + Y G L + I
Sbjct: 76 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPT 131
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 132 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 252 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 22/197 (11%)
Query: 76 LFMEYAPGGTLNDEIHRNGG-RLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMA 134
+ EY G+L D + G +L + ++ QI +G+ ++ +H ++++ NIL++
Sbjct: 80 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVS 139
Query: 135 ES-GAKIADFGCAKW----ESEALQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEM 188
++ KIADFG A+ E A + P+ + APE SD+W+ G + E+
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 189 ASGG-APWPNAADPMTVL-----YKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWA 242
+ G P+P +P + Y++ PE + + C + P++R
Sbjct: 200 VTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------ELYQLMRLCWKERPEDRPT 252
Query: 243 ASQLLKHPFLEEFCSCT 259
L LE+F + T
Sbjct: 253 FDYL--RSVLEDFFTAT 267
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 31 AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI 90
A TE + +FL E + + P+I+ +G V + M + EY G+L+ +
Sbjct: 87 AGYTERQRRDFLS-EASIMGQFDHPNIIRLEG--VVTRGRLAM--IVTEYMENGSLDTFL 141
Query: 91 HRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW- 148
+ G+ +V R + G+ YL VH D+ +RN+L+ + K++DFG ++
Sbjct: 142 RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 149 ----ESEALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADP 201
++ +GG P+ + APE ASD+W+ G + E +A G P+ N +
Sbjct: 202 EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN- 260
Query: 202 MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
V+ + LP P + + +C +D +R SQ++
Sbjct: 261 RDVISSVEEGYRLP-APMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 68 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 123
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 124 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 183
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 243
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 244 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESG-AKIADFGCAK---WESEALQSGG 157
++ ++ Q+ QG+ +L S +H D+ +RN+L+ AKI DFG A+ +S + G
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 158 TPM---FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKIAYSRE 213
+ +MAPE SD+W+ G + E+ S G P+P + YK+
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-VNSKFYKLVKDGY 286
Query: 214 LPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
PAF K + C +P R Q+ FL+E
Sbjct: 287 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQE 325
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L + + Y G L + I
Sbjct: 95 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPT 150
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 151 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 210
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 270
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 271 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ + Y G L + I
Sbjct: 75 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPT 130
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 190
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 251 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 41/192 (21%)
Query: 102 IVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGAK--IADFGCAKWESEALQSG--- 156
I Y ++L+ L+Y HS ++H D+K N+++ K + D+G A++ A +
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 198
Query: 157 GTPMFMAPE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELP 215
+ F PE + + ++ D+W++GC + M P+ + D L +IA
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTE 258
Query: 216 EVPAFLSK-----------------------------------QANDFLSNCLRRDPKER 240
E+ +L K +A D L LR D ++R
Sbjct: 259 ELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQR 318
Query: 241 WAASQLLKHPFL 252
A + ++HP+
Sbjct: 319 LTAKEAMEHPYF 330
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L + + Y G L + I
Sbjct: 73 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPT 128
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 129 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 188
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 248
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 249 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 75 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 130
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK--WESEAL-- 153
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ ++ E
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV 190
Query: 154 --QSGGT-PM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 251 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 94 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 149
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 150 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 209
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 269
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 270 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 74 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 129
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 130 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 189
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 250 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L + + Y G L + I
Sbjct: 76 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPT 131
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 132 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 252 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 57 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 111
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 112 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 172 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 230
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 231 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 272
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 100 SLIVSYTRQILQGLEYLHSNR--VVHCDIKSRNILM---AESGAKIADFGCA-KWESEAL 153
+L + +Q+ L +L + ++HCD+K NIL+ KI DFG + +
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIY 216
Query: 154 QSGGTPMFMAPEVARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRE 213
Q + + +PEV G A D+W++GC ++EM + G P + A+ + + KI
Sbjct: 217 QXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVDQMNKIVEVLG 275
Query: 214 LPEVPAFLSKQA 225
+P PA + QA
Sbjct: 276 IP--PAHILDQA 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L + + Y G L + I
Sbjct: 71 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPT 126
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G++YL S + VH D+ +RN ++ E K+ADFG A+ + S
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 247 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 109 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 226
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 227 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 279
Query: 268 SP 269
SP
Sbjct: 280 SP 281
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 67
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 68 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 241
Query: 233 LRRDPKER 240
ER
Sbjct: 242 WHEKADER 249
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 222
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ + +S + + CL P +R ++ HP++++
Sbjct: 223 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 68
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 69 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 242
Query: 233 LRRDPKER 240
ER
Sbjct: 243 WHEKADER 250
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 109 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 226
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 227 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 279
Query: 268 SP 269
SP
Sbjct: 280 SP 281
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 31 AKSTELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEI 90
A TE + +FL E + + P+I+ +G V + M + EY G+L+ +
Sbjct: 87 AGYTERQRRDFLS-EASIMGQFDHPNIIRLEG--VVTRGRLAM--IVTEYMENGSLDTFL 141
Query: 91 HRNGGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW- 148
+ G+ +V R + G+ YL VH D+ +RN+L+ + K++DFG ++
Sbjct: 142 RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Query: 149 ----ESEALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADP 201
++ +GG P+ + APE ASD+W+ G + E +A G P+ N +
Sbjct: 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN- 260
Query: 202 MTVLYKIAYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
V+ + LP P + + +C +D +R SQ++
Sbjct: 261 RDVISSVEEGYRLP-APMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 68
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 69 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 242
Query: 233 LRRDPKER 240
ER
Sbjct: 243 WHEKADER 250
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 227
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 228 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 280
Query: 268 SP 269
SP
Sbjct: 281 SP 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 74 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 128
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 129 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGG 192
EA + G P+ + +PE ASD+W+ G + E+ S G
Sbjct: 189 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 235
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 84 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 138
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 139 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 257
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 258 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 299
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG ++ +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 254
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 255 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 307
Query: 268 SP 269
SP
Sbjct: 308 SP 309
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 63
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 64 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 237
Query: 233 LRRDPKER 240
ER
Sbjct: 238 WHEKADER 245
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 269
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 270 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 322
Query: 268 SP 269
SP
Sbjct: 323 SP 324
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 269
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 270 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 322
Query: 268 SP 269
SP
Sbjct: 323 SP 324
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 227
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 228 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 280
Query: 268 SP 269
SP
Sbjct: 281 SP 282
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 249
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 250 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 302
Query: 268 SP 269
SP
Sbjct: 303 SP 304
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 241
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 242 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 294
Query: 268 SP 269
SP
Sbjct: 295 SP 296
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 110 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 227
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 228 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 280
Query: 268 SP 269
SP
Sbjct: 281 SP 282
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 241
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 242 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 294
Query: 268 SP 269
SP
Sbjct: 295 SP 296
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 242
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 243 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 295
Query: 268 SP 269
SP
Sbjct: 296 SP 297
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 242
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 243 FRQR-------VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 295
Query: 268 SP 269
SP
Sbjct: 296 SP 297
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 83
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 84 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW-----ESEALQSGGTPMFMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ E+ ++ S + PEV
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 257
Query: 233 LRRDPKER 240
ER
Sbjct: 258 WHEKADER 265
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 74
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 75 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 248
Query: 233 LRRDPKER 240
ER
Sbjct: 249 WHEKADER 256
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 157 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 274
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 275 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 327
Query: 268 SP 269
SP
Sbjct: 328 SP 329
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 242
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 243 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 295
Query: 268 SP 269
SP
Sbjct: 296 SP 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 34 TELPKSEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRN 93
TE + +FL E + + P+I+ +G V ++ +M + EY G+L+ + ++
Sbjct: 86 TEKQRRDFLG-EASIMGQFDHPNIIRLEG--VVTKSKPVM--IVTEYMENGSLDSFLRKH 140
Query: 94 GGRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAESGA-KIADFGCAKW---E 149
+ +V R I G++YL VH D+ +RNIL+ + K++DFG + +
Sbjct: 141 DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
Query: 150 SEA---LQSGGTPM-FMAPEVARGEHQGFASDIWAVGCTVIE-MASGGAPWPNAADPMTV 204
EA + G P+ + +PE ASD+W+ G + E M+ G P+ ++ V
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 205 LYKIAYSRELP---EVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
+ + LP + PA L + + +C ++D R Q++
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQ----LMLDCWQKDRNNRPKFEQIV 301
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 76 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 131
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 252 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 269
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 270 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 322
Query: 268 SP 269
SP
Sbjct: 323 SP 324
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 108 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 167
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 168 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 225
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ + +S + + CL P +R ++ HP++++
Sbjct: 226 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 144 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 261
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 262 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 314
Query: 268 SP 269
SP
Sbjct: 315 SP 316
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 105 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVF 222
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEE 254
+ + +S + + CL P +R ++ HP++++
Sbjct: 223 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 77 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 132
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV 192
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 253 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 135 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 190
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 191 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 311 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 77 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 132
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 192
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 253 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L + + Y G L + I
Sbjct: 76 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPT 131
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 252 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ + Y G L + I
Sbjct: 74 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFIRNETHNPT 129
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 130 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 189
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 249
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 250 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 16/219 (7%)
Query: 39 SEFLQREQKFLSSLNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLD 98
S+FL E + + P+++ G + SE + L+ +M++ G L + I
Sbjct: 81 SQFLT-EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH---GDLRNFIRNETHNPT 136
Query: 99 ESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNILMAES-GAKIADFGCAK------WESE 151
++ + Q+ +G+++L S + VH D+ +RN ++ E K+ADFG A+ ++S
Sbjct: 137 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 196
Query: 152 ALQSGG-TPM-FMAPEVARGEHQGFASDIWAVGCTVIEMASGGA-PWPNAADPMTVLYKI 208
++G P+ +MA E + + SD+W+ G + E+ + GA P+P+ +Y +
Sbjct: 197 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 256
Query: 209 AYSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLL 247
R L P + + + C + R + S+L+
Sbjct: 257 QGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVF--AAKSTELPKSEFLQREQKFLSSLNSPHIVG 59
D T +G G V DV K + + EF++ E K + +L+ +V
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQ 83
Query: 60 YKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQGLEYLHSN 119
G V ++ + + EY G L + + R ++ + + + +EYL S
Sbjct: 84 LYG--VCTKQRPIF--IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 120 RVVHCDIKSRNILMAESG-AKIADFGCAKW--ESEALQSGGTPM---FMAPEVARGEHQG 173
+ +H D+ +RN L+ + G K++DFG +++ + E S G+ + PEV
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 174 FASDIWAVGCTVIEMAS-GGAPWPNAADPMTVLYKIAYSRELPEVPAFLSKQANDFLSNC 232
SDIWA G + E+ S G P+ + T + IA L P S++ + +C
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYR-PHLASEKVYTIMYSC 257
Query: 233 LRRDPKER 240
ER
Sbjct: 258 WHEKADER 265
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIGGQVF 255
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 256 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 308
Query: 268 SP 269
SP
Sbjct: 309 SP 310
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIGGQVF 254
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 255 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 307
Query: 268 SP 269
SP
Sbjct: 308 SP 309
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIGGQVF 255
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 256 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 308
Query: 268 SP 269
SP
Sbjct: 309 SP 310
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIGGQVF 255
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 256 FRQR-------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 308
Query: 268 SP 269
SP
Sbjct: 309 SP 310
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 95 GRLDESLIVSYTRQILQGLEYLHSNRVVHCDIKSRNIL--MAESGAKIADFGCAKWESEA 152
G L E L S+ Q+L+ + + H+ V+H DIK NIL + K+ DFG +
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 153 LQS--GGTPMFMAPEVAR-GEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIA 209
+ + GT ++ PE R + G ++ +W++G + +M G P+ + D + ++
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIGGQVF 254
Query: 210 YSRELPEVPAFLSKQANDFLSNCLRRDPKERWAASQLLKHPFLEEFC--SCTKQIQESNC 267
+ + +S + + CL P +R ++ HP++++ T +I +
Sbjct: 255 FRQR-------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL 307
Query: 268 SP 269
SP
Sbjct: 308 SP 309
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 27/259 (10%)
Query: 2 DWTRGHTIGQGSSATVSLATSLRSGDVFAAKSTEL----------PKSEFLQREQKFLSS 51
D ++GQG+ + GD TE+ SE +S
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 52 LNSPHIVGYKGCDVTSEDNKLMYNLFMEYAPGGTLNDEIHRNGGRLDESLIVSYTRQILQ 111
L+ H+V G V ++N L+ E+ G+L+ + +N ++ + +Q+
Sbjct: 69 LSHKHLVLNYGVCVCGDENILV----QEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124
Query: 112 GLEYLHSNRVVHCDIKSRNILMA-ESGAKIADFGCAKWESEALQSGGTPM--------FM 162
+ +L N ++H ++ ++NIL+ E K + K + P ++
Sbjct: 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 163 APE-VARGEHQGFASDIWAVGCTVIEMASGGAPWPNAADPMTVLYKIAYSRELPEVPAFL 221
PE + ++ A+D W+ G T+ E+ SGG +A D K+ + + ++PA
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR---KLQFYEDRHQLPAPK 241
Query: 222 SKQANDFLSNCLRRDPKER 240
+ + + ++NC+ +P R
Sbjct: 242 AAELANLINNCMDYEPDHR 260
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,591,127
Number of Sequences: 62578
Number of extensions: 450792
Number of successful extensions: 3739
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1055
Number of HSP's gapped (non-prelim): 1221
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)