BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015506
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XIP7|GTG1_ARATH GPCR-type G protein 1 OS=Arabidopsis thaliana GN=GTG1 PE=1 SV=1
Length = 468
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/396 (84%), Positives = 374/396 (94%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
AR++NWKVDLFCLILLLVFMLPYYHCYLML NSGVR+ERA++GA LFL AFLYAFWRMG+
Sbjct: 73 ARMINWKVDLFCLILLLVFMLPYYHCYLMLRNSGVRRERASVGAFLFLSAFLYAFWRMGV 132
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
HFPMPS +KGFFT+PQLVSRIGVIGVT+MAVL+GFGAVNLPYSY+SLFIREI+E++I +L
Sbjct: 133 HFPMPSADKGFFTMPQLVSRIGVIGVTLMAVLSGFGAVNLPYSYISLFIREIEEADIISL 192
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ERQL+QS ETCIAKKKKIILCQ+E++R QGSEE K SFF+RIVGTVVRSVQDDQKEQD
Sbjct: 193 ERQLIQSTETCIAKKKKIILCQLEVERNQGSEENQKRSSFFRRIVGTVVRSVQDDQKEQD 252
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
IKI+EAEV+ALEELSKQLFLE+YELRQAK+AAAYSRTW+GH+QNLLGYA SIYCVYKM+K
Sbjct: 253 IKILEAEVEALEELSKQLFLEVYELRQAKDAAAYSRTWKGHVQNLLGYACSIYCVYKMLK 312
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
SLQSVVFKEAG+ DPVT ISIFL+ FDIG++A LLSQYISLLFIGMLIV+SVRGFL N+
Sbjct: 313 SLQSVVFKEAGTKDPVTTMISIFLRLFDIGVDAALLSQYISLLFIGMLIVISVRGFLTNL 372
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
MKFFFAVSRVGSGSSSNVVLFLSEIMGMYF+SSILLIRKSL EYR IIT+VLGG+IQFD
Sbjct: 373 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFD 432
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQADKHPID 405
FYHRWFDAIFVASAFLSL+LLSAHYTSRQ+DKH I+
Sbjct: 433 FYHRWFDAIFVASAFLSLVLLSAHYTSRQSDKHAIE 468
>sp|Q0WQG8|GTG2_ARATH GPCR-type G protein 2 OS=Arabidopsis thaliana GN=GTG2 PE=1 SV=2
Length = 467
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/396 (85%), Positives = 375/396 (94%), Gaps = 1/396 (0%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
AR+VNWKVDLFCLI+LLVFMLPYYHCYLML N+GVR+ERAA+GA+LFL AFLYAFWRMGI
Sbjct: 73 ARMVNWKVDLFCLIVLLVFMLPYYHCYLMLRNTGVRRERAAVGALLFLTAFLYAFWRMGI 132
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
HFPMPS +KGFF++PQLVSRIGVIGVT+MAVL+GFGAVNLPYSY+SLFIREI+ESEIK+L
Sbjct: 133 HFPMPS-DKGFFSMPQLVSRIGVIGVTLMAVLSGFGAVNLPYSYISLFIREIEESEIKSL 191
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ERQLMQS+ETCIAKKKKI+LCQ+E++R SEE K +SFF+R VGTVVRSVQDDQKEQD
Sbjct: 192 ERQLMQSMETCIAKKKKILLCQVEVERSLVSEEHQKGKSFFRRFVGTVVRSVQDDQKEQD 251
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
IK+MEAEV+ LEELSKQLFLEIYELRQAK+AAA+SRTW+GH+QN LGYA SIYCVYKM+K
Sbjct: 252 IKLMEAEVEGLEELSKQLFLEIYELRQAKDAAAFSRTWKGHVQNFLGYACSIYCVYKMLK 311
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
SLQSVVFKEAG+ DPVTM ISIFLQFFDIG++A LLSQYISLLFIGMLIV+SVRGFL N+
Sbjct: 312 SLQSVVFKEAGTKDPVTMMISIFLQFFDIGVDAALLSQYISLLFIGMLIVISVRGFLTNL 371
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
MKFFFAVSRVGSGSSSNVVLFLSEIMGMYF+SSILLIRKSL EYR IIT+VLGG+IQFD
Sbjct: 372 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFD 431
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQADKHPID 405
FYHRWFDAIFVASAFLSLLLLSAHYTSRQ DKHPID
Sbjct: 432 FYHRWFDAIFVASAFLSLLLLSAHYTSRQIDKHPID 467
>sp|Q5F448|GPHR_CHICK Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1
Length = 455
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/394 (45%), Positives = 267/394 (67%), Gaps = 12/394 (3%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + + L A + L F+Y FW++G
Sbjct: 70 SRYFHWKLNLCVILLILVFMVPFYIGYFVVSNIRLLHRQKLLFACVLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDADILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK+I + M Q E K F+ ++ +V SV ++
Sbjct: 190 ERRLLQTMDMIISKKKRIAVAHRTM--FQRGEVHNKPTGFWG-MIKSVTTSVAGS---EN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LSLIQQEVDALEELSRQLFLETADLHATKERIEYSKTFQGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 421 FYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|B5X1G3|GPHR_SALSA Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1
Length = 455
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 268/394 (68%), Gaps = 12/394 (3%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK +L+ ++L+L+F++P+Y Y ++ N + + + L A + F+Y FW++G
Sbjct: 70 SRYFHWKFNLYVILLVLIFVVPFYIGYFVVSNIRLLQRQKLLFACVVWFTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + ES+I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTESDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ ++KKK+I + + +M Q E++ K F+ G + ++
Sbjct: 190 ERRLLQTMDMIVSKKKRIAMTRRQM--YQRGEDQNKQTGFW----GMIKSVTSSPPGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L+ KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LSLIQQEVDALEELSRQLFLETVDLQATKERIEYSKTFQGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LL+R S+ +EYR I+TEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLVLAQIMGMYFVSSVLLMRMSMPLEYRSIVTEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 421 FYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|P0CG08|GPHRB_HUMAN Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1
Length = 455
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/395 (44%), Positives = 263/395 (66%), Gaps = 10/395 (2%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + ++ L + L L F+Y FW++G
Sbjct: 70 SRYFHWKMNLCVILLILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK++ + + M Q E K F+ G + ++
Sbjct: 190 ERRLLQTMDMIISKKKRMAMARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLS-AHYTSRQADKHP 403
FYHRWFD IF+ SA S+L L AH + + P
Sbjct: 421 FYHRWFDVIFLVSALSSILFLYLAHKQAPEKQMAP 455
>sp|B7ZAQ6|GPHRA_HUMAN Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2
Length = 455
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/395 (44%), Positives = 263/395 (66%), Gaps = 10/395 (2%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + ++ L + L L F+Y FW++G
Sbjct: 70 SRYFHWKMNLCVILLILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK++ + + M Q E K F+ G + ++
Sbjct: 190 ERRLLQTMDMIISKKKRMAMARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLS-AHYTSRQADKHP 403
FYHRWFD IF+ SA S+L L AH + + P
Sbjct: 421 FYHRWFDVIFLVSALSSILFLYLAHKQAPEKQMAP 455
>sp|Q5BIM9|GPHR_BOVIN Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2
Length = 455
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/394 (44%), Positives = 265/394 (67%), Gaps = 12/394 (3%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + ++ L + L L F+Y FW++G
Sbjct: 70 SRYFHWKMNLCVILLILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK++ + + M Q E K F+ G + ++
Sbjct: 190 ERRLLQTMDMIISKKKRMAMTRRTM--FQKGEVHNKPSGFW----GMIKSVTTSAPGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 421 FYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|Q8BS95|GPHR_MOUSE Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=2 SV=2
Length = 455
Score = 330 bits (847), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 263/394 (66%), Gaps = 12/394 (3%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + ++ L + L L F+Y FW++G
Sbjct: 70 SRYFHWKLNLCVILLILVFMVPFYIGYFIVSNIQLLHKQRLLFSCLLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK++ + + M Q + + K + G + ++
Sbjct: 190 ERRLLQTMDMIISKKKRMAVARRTM--FQRGDVQNKPSGLW----GMLKSVTASAPGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++V G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVLDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ EYR IITEVL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPPEYRTIITEVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 421 FYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|B2ZXD5|GPHR_CRIGR Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1
Length = 455
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 263/394 (66%), Gaps = 12/394 (3%)
Query: 10 ARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGI 69
+R +WK++L ++L+LVFM+P+Y Y ++ N + ++ L + L L F+Y FW++G
Sbjct: 70 SRYFHWKMNLCVILLILVFMVPFYIGYFIVSNIQLLHKQRLLFSCLLWLTFMYFFWKLGD 129
Query: 70 HFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKAL 129
FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I AL
Sbjct: 130 PFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILAL 189
Query: 130 ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQD 189
ER+L+Q+++ I+KKK++ + + M Q E + K + G + ++
Sbjct: 190 ERRLLQTMDMIISKKKRMAVARRTM--FQRGEVQNKPSGLW----GMLKSVTASAPGSEN 243
Query: 190 IKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIK 249
+ +++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+
Sbjct: 244 LTLIQQEVDALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFM 303
Query: 250 SLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNV 309
+ ++V G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ +
Sbjct: 304 ATINIVLDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVSSIRGLLITL 363
Query: 310 MKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD 369
KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ EYR IIT+VL GE+QF+
Sbjct: 364 TKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPPEYRTIITQVL-GELQFN 420
Query: 370 FYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 421 FYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|Q6DDW6|GPHR_XENLA Golgi pH regulator OS=Xenopus laevis GN=gpr89-b PE=2 SV=1
Length = 455
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 266/401 (66%), Gaps = 14/401 (3%)
Query: 3 LVNSGCRARVVNWKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLY 62
L+NS +R +WK++L ++L+LVF++P+Y Y ++ N + + L + L F+Y
Sbjct: 65 LLNSS--SRYFHWKLNLCVILLVLVFVVPFYIGYFVVSNIRLLHRQRLLFSCTIWLTFMY 122
Query: 63 AFWRMGIHFPMPSPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREID 122
FW++G FP+ SP+ G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R +
Sbjct: 123 FFWKLGDPFPILSPKHGILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVT 182
Query: 123 ESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQ 182
+++I ALER+L+Q+++ ++KKK+I + M Q EE K F+ G +
Sbjct: 183 DADILALERRLLQTMDMIVSKKKRIAAVRRNM--FQRGEEHSKPSGFW----GMIKSVTS 236
Query: 183 DDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIY 242
+++ ++ EV ALEELS+QLFLE +L KE YS+T++G N LGY SIY
Sbjct: 237 SAPVSENLYQIQQEVDALEELSRQLFLETADLHATKERIEYSKTFQGKYFNFLGYFFSIY 296
Query: 243 CVYKMIKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSV 302
CV+K+ + ++VF G DPVT I I + + I + + SQ+IS + +G++IV S+
Sbjct: 297 CVWKIFMATINIVFDRVGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSI 356
Query: 303 RGFLMNVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVL 362
RG L+ + KFF+A+S S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL
Sbjct: 357 RGLLITLTKFFYAIS--SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL 414
Query: 363 GGEIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQA-DKH 402
GE+QF+FYHRWFD IF+ SA S+L L + +QA +KH
Sbjct: 415 -GELQFNFYHRWFDVIFLVSALSSILFL--YLAHKQAPEKH 452
>sp|A6NKF9|GPHRC_HUMAN Putative Golgi pH regulator C OS=Homo sapiens GN=GPR89C PE=5 SV=2
Length = 320
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 218/326 (66%), Gaps = 10/326 (3%)
Query: 79 GFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIE 138
G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++
Sbjct: 4 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 63
Query: 139 TCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQ 198
I+KKK++ + + M Q E K F+ G + +++ +++ EV
Sbjct: 64 MIISKKKRMAMARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSENLTLIQQEVD 117
Query: 199 ALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKE 258
ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+ + ++VF
Sbjct: 118 ALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDR 177
Query: 259 AGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSR 318
G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S
Sbjct: 178 VGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS- 236
Query: 319 VGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAI 378
S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD I
Sbjct: 237 -SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVI 294
Query: 379 FVASAFLSLLLLS-AHYTSRQADKHP 403
F+ SA S+L L AH + + P
Sbjct: 295 FLVSALSSILFLYLAHKQAPEKQMAP 320
>sp|Q54QM5|GPHR_DICDI Golgi pH regulator homolog OS=Dictyostelium discoideum GN=gpr89
PE=3 SV=1
Length = 547
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 188 QDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKM 247
DIK +E E++ LE+L++ LF +I+EL+ + +S T RG N LGY SIY
Sbjct: 336 DDIKQLEREIKQLEDLNRDLFTQIHELKLERLRIQFSTTLRGKFYNWLGYFFSIYW---K 392
Query: 248 IKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLM 307
KS ++VF G +DPVT + I L++F ++ SQ+IS + +G++ S+RGFL
Sbjct: 393 KKSALNIVFDRRGGMDPVTRGLDIALRYFHFQVDVTFWSQHISFILVGLMTASSIRGFLN 452
Query: 308 NVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLA-IEYRIIITEVLGGEI 366
++K F S S SS+N+VL L+++MGMYF+SS+L++R S+ I R I+T++LG +I
Sbjct: 453 QILKVFHEYS--SSLSSNNIVLILAQVMGMYFISSVLMMRTSMPEIYTRFIVTQILG-DI 509
Query: 367 QFDFYHRWFDAIFVASAFLSLLLL 390
+F FYHRWFD IF+ SA ++ L L
Sbjct: 510 EFSFYHRWFDFIFIPSAIITTLAL 533
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 88/142 (61%)
Query: 15 WKVDLFCLILLLVFMLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMP 74
W+ DL + + L+ +LPYY YL++ G K + +++ L+ +L FW++G FP+
Sbjct: 125 WEFDLTLMSINLILVLPYYQFYLLVLAYGFSKRKTLFFSLVLLVLYLILFWKIGDPFPIL 184
Query: 75 SPEKGFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLM 134
G ++ + RIG++G TVM++L+G+GAV +PYSY++ F++ + + I LE+Q
Sbjct: 185 KEYTGLVSLEMGIGRIGIVGCTVMSLLSGYGAVYVPYSYITYFLKPVKDVTITKLEKQFN 244
Query: 135 QSIETCIAKKKKIILCQMEMDR 156
+++ KKK+++L + E+ R
Sbjct: 245 HALDKIFNKKKRVVLLKRELTR 266
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 37.0 bits (84), Expect = 0.30, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Query: 123 ESEIKALERQLMQSIETCIAKKKKI-ILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSV 181
ES+++AL Q+ + +++ IAK +KI + E+ R+QG +L+A K V + V
Sbjct: 1149 ESDMEALRNQISE-LQSTIAKLEKIKSTLEGEVARLQG---ELEAEQLAKSNVEKQKKKV 1204
Query: 182 QDDQKEQDIKIME--AEVQALEELSKQLFLEIYELR-QAKEA 220
+ D +++ ++ E A QAL++L K+L E+ E++ Q EA
Sbjct: 1205 ELDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQTQLSEA 1246
>sp|P85001|CE290_DANRE Centrosomal protein of 290 kDa OS=Danio rerio GN=cep290 PE=2 SV=1
Length = 2439
Score = 35.4 bits (80), Expect = 0.70, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 37/143 (25%)
Query: 117 FIREIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARS-------- 168
F+R+ EI+ LE L + K+K++ + EM + + S E+L R+
Sbjct: 109 FLRD----EIRQLESHLER-------KEKEVTQLEKEMGKERKSNEELALRAEEAEEKNR 157
Query: 169 FFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEEL----------------SKQLFLEIY 212
KR + + R +++Q +QDI+ E + E L ++QL+ +
Sbjct: 158 KLKREIKQLTR--KNEQLQQDIEFYRKEAEQRESLQTKEESNEIQRRLTKANQQLYQCME 215
Query: 213 ELRQAKEAAAYSRTWRGHMQNLL 235
EL+ A++ AA R+ H+Q L
Sbjct: 216 ELQHAEDMAANLRSENEHLQKNL 238
>sp|Q9R269|PEPL_MOUSE Periplakin OS=Mus musculus GN=Ppl PE=1 SV=1
Length = 1755
Score = 35.0 bits (79), Expect = 1.1, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 123 ESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARS---FFKRIVGTVVR 179
ESE+ L +L++ +++K + ++ Q E L+ R K + V++
Sbjct: 1183 ESEVANLRLELVE-------QERKFRGAEEQLKSYQSELEALRNRGPQVEVKEVTKEVIK 1235
Query: 180 SVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEA 220
D + EQ+++ + E+ L ++ LEIY+L+Q +A
Sbjct: 1236 YTTDPETEQELQRLREEIMDKTRLIERCDLEIYQLKQEIQA 1276
>sp|P56154|PGK_HELPY Phosphoglycerate kinase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=pgk PE=3 SV=1
Length = 402
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 131 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRI 173
R+ + +I+ CI K K I+ + R +G EEKL + F KR+
Sbjct: 47 RESLPTIQYCIDNKAKDIILVSHLGRPKGVEEKLSLKPFLKRL 89
>sp|Q9ZJP1|PGK_HELPJ Phosphoglycerate kinase OS=Helicobacter pylori (strain J99) GN=pgk
PE=3 SV=1
Length = 402
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 131 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRI 173
R+ + +I+ CI K K I+ + R +G EEKL + F KR+
Sbjct: 47 RESLPTIQFCIDNKAKDIILVSHLGRPKGVEEKLSLKPFLKRL 89
>sp|Q9HJ36|PFDB_THEAC Prefoldin subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pfdB PE=3 SV=1
Length = 124
Score = 33.9 bits (76), Expect = 2.2, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 131 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD-----DQ 185
++L ++IE ++ ++ L EM + KL + R VG+++ VQD D+
Sbjct: 18 QELEENIEKLATQRYQLDLSLKEMQKTLDELNKLDDNTPIYRTVGSILYRVQDKKKLVDE 77
Query: 186 KEQDIKIMEAEVQALEELSKQLFLEIYELRQA 217
++ I++ + + LE+ K L + EL+ A
Sbjct: 78 LDEQIELTKIRLSTLEKQQKSLEEKYKELQNA 109
>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
Length = 2701
Score = 33.9 bits (76), Expect = 2.6, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 122 DESEIKALERQLMQSIETCIAKKKKIILCQMEM----DRIQGSEEKLKARSFFKRIVGTV 177
++ E++ L +L + E +K I + E+ DR+ EEKLK +S +
Sbjct: 1083 NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQ 1142
Query: 178 VRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEA 220
+ +VQ++ E KI E E E +K+L LE E + + A
Sbjct: 1143 LLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELA 1185
>sp|Q27489|H33L3_CAEEL Putative histone H3.3-like type 3 OS=Caenorhabditis elegans
GN=his-69 PE=5 SV=1
Length = 127
Score = 33.1 bits (74), Expect = 3.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 153 EMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIY 212
E+ R Q S + L + F+R+V + + V+ QD++ A +QAL+E S+ + ++
Sbjct: 42 EIRRYQKSTDLLLRKLPFQRLVREIAQDVK-----QDLRFQSAAIQALQEASEYFLVGLF 96
Query: 213 E 213
E
Sbjct: 97 E 97
>sp|P38799|YHN8_YEAST Uncharacterized protein YHR078W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YHR078W PE=4 SV=1
Length = 552
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 152/367 (41%), Gaps = 100/367 (27%)
Query: 85 QLVSRIGVIGVTVMAVLAGFGAVN-LPYSYLSLF--IREIDESE--------IKALERQL 133
+++R+ + GVTVMA L+G V+ L Y++L ++ R S+ + L
Sbjct: 188 NILTRLSIGGVTVMASLSGLATVSSLYYNFLVIWHKFRNTPMSDPSFRNINNSNNNSKSL 247
Query: 134 MQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIM 193
+ + + I +K IQ E ++ ++RS++++ E
Sbjct: 248 LWTTDAYIEEK------------IQDYEHNIEQNV-------QILRSLEEEVGENST--F 286
Query: 194 EAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMI----K 249
+AE L E LE+ +L + + RT++ + +G+ IYC++K+I K
Sbjct: 287 KAE---LMEKIAWYQLELGKLEALLQQSPQVRTFKKAFE--VGFI--IYCLHKLIITFLK 339
Query: 250 SLQSVV--------------FKEAGSVDPVTMTISIFLQF----FDIGINAQLLSQYISL 291
+ ++ F E + DP+ +TI+ L F F+ + L++ ISL
Sbjct: 340 RIPYIIYHSLKYPDDYDYENFSENAASDPLAITIANILDFSFFRFNYQHDLDSLTKQISL 399
Query: 292 -----LFIGML-IVMSVRGFLMNVMKFFF---AVSRVGSGSSSNVV-------------- 328
LF+ L V + +++ ++ F A+ + + ++NV+
Sbjct: 400 FLSISLFLCCLSAVNTTISYVVTLLPIKFQILALFAMQNDDTANVLPEYTNNSSYKGKKR 459
Query: 329 --------------LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD--FYH 372
L +SE+ G+Y +++ L++R L E + E+LGG+
Sbjct: 460 NYSQEQKGISLIKNLVVSELTGVYVLATTLMVRSHLPFEVSQRLKELLGGKFTVPNIVID 519
Query: 373 RWFDAIF 379
WFD ++
Sbjct: 520 SWFDEVY 526
>sp|Q24702|DVA1_DICVI DVA-1 polyprotein OS=Dictyocaulus viviparus GN=DVA-1 PE=1 SV=1
Length = 1557
Score = 32.3 bits (72), Expect = 6.9, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 113 YLSLFIREIDESEIKAL-ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFK 171
YL+ ++ E ++EIK L E+ Q+I KKI ME + ++K KAR K
Sbjct: 1427 YLT-WLNEEQKAEIKQLKEKDEKQTI------GKKI----MEFFELTSGDDKEKAREQLK 1475
Query: 172 RIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHM 231
V+ ++K ++K ++ +LEE+SK++ E E + + A +R +
Sbjct: 1476 AACKHYVKMYVGEEKAAELKKLKDSGISLEEMSKKV-TETIETIEDEAVRAKARRIHSYC 1534
Query: 232 QNLLG 236
Q + G
Sbjct: 1535 QRIFG 1539
>sp|Q9CW03|SMC3_MOUSE Structural maintenance of chromosomes protein 3 OS=Mus musculus
GN=Smc3 PE=1 SV=2
Length = 1217
Score = 32.3 bits (72), Expect = 7.3, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 124 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 183
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 184 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 214
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|Q5R4K5|SMC3_PONAB Structural maintenance of chromosomes protein 3 OS=Pongo abelii
GN=SMC3 PE=2 SV=1
Length = 1217
Score = 32.3 bits (72), Expect = 7.4, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 124 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 183
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 184 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 214
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes protein 3 OS=Homo sapiens
GN=SMC3 PE=1 SV=2
Length = 1217
Score = 32.3 bits (72), Expect = 7.4, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 124 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 183
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 184 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 214
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|O97594|SMC3_BOVIN Structural maintenance of chromosomes protein 3 OS=Bos taurus
GN=SMC3 PE=1 SV=1
Length = 1218
Score = 32.0 bits (71), Expect = 8.0, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 124 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 183
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 184 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 214
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.142 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,433,282
Number of Sequences: 539616
Number of extensions: 4697223
Number of successful extensions: 18552
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 18478
Number of HSP's gapped (non-prelim): 73
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)