Citrus Sinensis ID: 015507

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
MGGRSSREASWRQDSSFRSTSSSWDPQTGYLQSPYGQESQNYPPQTYPPPQTYSTQQYYPSSEEHSGNTRKLDRRYSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNHDQTRKETEFALSALMEIPSQYKATIELNILGRRKGNVPERVALPPPVYGATTSFHSPKPFHSTSFKPNAPSYQESQPVSSAPPATSSTMKTSFAPFA
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccEEEECHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***************************************************************************YSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMS********ETEFALSALMEIPSQYKATIELNILGR********V********************************************************
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MGGRSSREASWRQDSSFRSTSSSWDPQTGYLQSPYGQESQNYPPQTYPPPQTYSTQQYYPSSEEHSGNTRKLDRRYSRIADDYKSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFNRRSLHYIGDGLNPYEQAISIIGKTLAVFDEDNLIPCYGFGDASTHDQDVFSFYSGGRFCYGFEEVLSRYREIVPNLKLAGPTSFAPVIEMAMSIVEQSGGQYHVLLIIADGQVTRSVDTVRGCLSPQEQKTVDAIVKASELPLSIVLVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNHDQTRKETEFALSALMEIPSQYKATIELNILGRRKGNVPERVALPPPVYGATTSFHSPKPFHSTSFKPNAPSYQESQPVSSAPPATSSTMKTSFAPFA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase that mediates the formation of 'Lys-63'-linked multiubiquitin chains. Regulates apical dominance by acting on the auxin transport proteins abundance.probableQ9LY87

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2X5N, chain A
Confidence level:probable
Coverage over the Query: 102-116,130-237,249-302
View the alignment between query and template
View the model in PyMOL
Template: 1JEY, chain A
Confidence level:probable
Coverage over the Query: 97-117,129-278
View the alignment between query and template
View the model in PyMOL