Query 015509
Match_columns 405
No_of_seqs 182 out of 1337
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 13:52:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015509.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015509hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i6la_ c.26.1.1 (A:) Tryptoph 100.0 1.1E-86 7.9E-91 658.9 33.5 311 79-404 2-326 (326)
2 d1r6ta2 c.26.1.1 (A:82-467) Tr 100.0 2.4E-59 1.7E-63 472.9 17.5 273 77-379 73-381 (386)
3 d1n3la_ c.26.1.1 (A:) Tyrosyl- 100.0 2.2E-55 1.6E-59 436.0 22.2 265 77-381 31-337 (339)
4 d1j1ua_ c.26.1.1 (A:) Tyrosyl- 100.0 2.6E-53 1.9E-57 416.1 20.6 240 78-363 28-305 (306)
5 d1h3fa1 c.26.1.1 (A:5-347) Tyr 100.0 2.3E-45 1.6E-49 364.7 18.6 239 76-359 31-298 (343)
6 d1jila_ c.26.1.1 (A:) Tyrosyl- 100.0 1.6E-28 1.2E-32 241.2 22.1 237 77-359 30-308 (323)
7 d2ts1a_ c.26.1.1 (A:) Tyrosyl- 99.9 8.8E-27 6.4E-31 228.3 18.9 239 77-360 29-309 (319)
8 d1j09a2 c.26.1.1 (A:1-305) Glu 98.3 1.6E-06 1.2E-10 82.3 12.8 167 86-275 9-249 (305)
9 d1nzja_ c.26.1.1 (A:) Glutamyl 98.3 1.8E-06 1.3E-10 81.3 11.4 166 86-275 10-231 (286)
10 d1gtra2 c.26.1.1 (A:8-338) Glu 97.1 0.00067 4.9E-08 64.6 8.9 87 80-167 19-124 (331)
11 d1pfva2 c.26.1.1 (A:4-140,A:17 90.4 0.46 3.4E-05 43.3 9.1 59 78-136 3-89 (350)
12 d1li5a2 c.26.1.1 (A:1-315) Cys 90.1 0.25 1.8E-05 44.9 7.0 25 76-100 20-45 (315)
13 d1ffya3 c.26.1.1 (A:1-200,A:39 88.7 0.08 5.8E-06 51.3 2.4 30 78-107 49-84 (450)
14 d1irxa2 c.26.1.1 (A:3-319) Cla 86.7 0.14 9.9E-06 44.9 2.4 23 78-100 19-41 (317)
15 d2d5ba2 c.26.1.1 (A:1-348) Met 86.2 0.27 2E-05 44.5 4.4 60 202-285 251-310 (348)
16 d2d5ba2 c.26.1.1 (A:1-348) Met 85.5 0.46 3.4E-05 42.9 5.6 51 87-137 14-91 (348)
17 d1ivsa4 c.26.1.1 (A:1-189,A:34 85.3 0.15 1.1E-05 48.0 2.2 24 77-100 33-58 (425)
18 d1ilea3 c.26.1.1 (A:1-197,A:38 82.3 0.3 2.2E-05 46.2 2.9 29 79-107 40-74 (452)
19 d1irxa2 c.26.1.1 (A:3-319) Cla 75.1 0.35 2.5E-05 42.1 0.7 15 268-285 276-290 (317)
20 d1ivsa4 c.26.1.1 (A:1-189,A:34 74.0 4.2 0.00031 37.5 8.3 58 203-284 329-387 (425)
21 d1h3na3 c.26.1.1 (A:1-225,A:41 69.4 2.8 0.0002 39.5 5.9 30 78-107 34-69 (494)
22 d1li5a2 c.26.1.1 (A:1-315) Cys 68.5 1.2 8.8E-05 40.1 2.8 28 265-296 263-295 (315)
23 d1rqga2 c.26.1.1 (A:1-138,A:17 62.0 0.68 5E-05 41.9 -0.4 15 265-283 306-320 (361)
24 d1pfva2 c.26.1.1 (A:4-140,A:17 58.8 0.98 7.2E-05 40.9 0.1 15 265-283 291-305 (350)
25 d1f7ua2 c.26.1.1 (A:136-483) A 56.4 4.9 0.00035 36.8 4.7 19 82-100 14-32 (348)
26 d1ilea3 c.26.1.1 (A:1-197,A:38 54.5 2.4 0.00018 39.6 2.2 20 259-283 394-413 (452)
27 d1ffya3 c.26.1.1 (A:1-200,A:39 54.3 2.6 0.00019 40.0 2.4 57 201-283 353-412 (450)
28 d1iq0a2 c.26.1.1 (A:97-466) Ar 53.9 1 7.5E-05 42.1 -0.7 67 205-294 254-320 (370)
29 d1rqga2 c.26.1.1 (A:1-138,A:17 50.5 2.4 0.00017 38.0 1.3 13 86-98 12-24 (361)
30 d1f7ua2 c.26.1.1 (A:136-483) A 45.4 4.7 0.00034 36.9 2.5 80 186-296 208-296 (348)
31 d1h3na3 c.26.1.1 (A:1-225,A:41 38.7 5 0.00036 37.7 1.6 27 202-228 339-365 (494)
32 d1iq0a2 c.26.1.1 (A:97-466) Ar 32.4 4.7 0.00034 37.3 0.2 19 82-100 13-31 (370)
33 d2ga1a1 a.4.1.16 (A:1-102) Hyp 20.8 43 0.0031 25.3 3.9 40 311-352 49-88 (102)
34 d1htjf_ a.91.1.1 (F:) Pdz-RhoG 20.0 1.2E+02 0.0091 24.6 7.2 69 334-402 41-122 (182)
No 1
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=1.1e-86 Score=658.94 Aligned_cols=311 Identities=48% Similarity=0.769 Sum_probs=296.0
Q ss_pred ceEEEeeCCCCcchhhhHHHHHHHHHHhc--------------cCCCcChHHHHHHHHHHHHHHHHcCCCCCceEEEEcC
Q 015509 79 KRIVSGVQPTGSIHLGNYLGAIKNWIALQ--------------ITLPYDTQQLSKATRETAAIYLACGIDNSKASVFVQS 144 (405)
Q Consensus 79 ~~i~sGi~PTG~lHLGnylg~i~~~~~lQ--------------it~~~d~~~l~~~~~~~~~~~lA~GiDp~k~~if~qS 144 (405)
.+||||+||||.||||||+|+|++|++|| +|...+++.+++++++++++|+|||+||++++||+||
T Consensus 2 ~~v~tG~~PSG~~HlG~~~g~i~~~~~lq~~~~~~i~iAD~halt~~~~~~~l~~~~~~~~~~~lA~G~dp~k~~i~~qS 81 (326)
T d1i6la_ 2 KTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQS 81 (326)
T ss_dssp CEEEEEECCCSCCBHHHHHHTHHHHHHHTTTSEEEEEECHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCCTTTSEEEEGG
T ss_pred CeeEeCcCCCCccHHHHHHHHHHHHHHHhCCCCEEEEeehHHhhccCCCHHHHHHHHHHHHHHhhhhhccccceEEEeec
Confidence 58999999999999999999999999999 5667899999999999999999999999999999999
Q ss_pred CchhhhHHHHHHhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhccccceeccccchHHHHHHHHHHHH
Q 015509 145 HVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAE 224 (405)
Q Consensus 145 ~v~~h~el~w~L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~~~adlVpvG~DQ~~hleLtRdia~ 224 (405)
++++|.+++|+++|.++++||+|+.+||++.+.. ++.++|+|+||+|||||||+|++|+||||+||+||+|||||||+
T Consensus 82 ~~~~~~el~~~l~~~~~~~~l~r~~~~k~~~~~~--~~~~~g~l~YP~lQaADIl~~~~d~vpvG~DQ~~h~eltRdia~ 159 (326)
T d1i6la_ 82 EVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGK--EAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAE 159 (326)
T ss_dssp GCTHHHHHHHHHHTTSCHHHHHTCHHHHHHHTTC--SSCCHHHHTHHHHHHHHHHTTTCSEEECCGGGHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhhhhhhhhhhcccchhhcccc--ccCCccccccccccchhHHhcCccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999986543 68899999999999999999999999999999999999999999
Q ss_pred HHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecCCCHHHHHHHhhcccCCCCCC
Q 015509 225 RVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKTDSSAG 304 (405)
Q Consensus 225 r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~kKI~kA~Td~~~~ 304 (405)
|||++|| ..|..|...+...+++++++.||.+|||||+++++++|+|+|+|++|++||++|+||+.+.
T Consensus 160 r~n~~~~------------~~~~~~~~~i~~~~~~~~~~~d~~~kmskS~~~~~~~I~l~D~~~~i~kKI~~a~td~~~~ 227 (326)
T d1i6la_ 160 RFNKRYG------------ELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGT 227 (326)
T ss_dssp HHHHHHC------------SCCCCCEEECCSSSSSCBCSSCTTSBCCTTCSCGGGCCBTTCCHHHHHHHHHHCCCCSSCC
T ss_pred HhhhccC------------CcccccccccccccceeeecCCccccccccCCCccceeeccCCHHHHHHHHHhhhccccCC
Confidence 9999998 4578888777766678999889999999999998899999999999999999999999999
Q ss_pred cccCCCCCCccchHHHHHHhhCCCCHHHHHHHHhcCCcchHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 015509 305 LEFDNLERPECNNLLSIYQLISGKTKGEVAEECQNMNWGTFKPLLTDALIEHLHPIQVRYEEIMSDSAYLDKVLADGAAK 384 (405)
Q Consensus 305 i~~~~~~rpev~nll~i~~~~t~~~~eel~~~y~~~~~gdlK~~Lae~i~~~L~pirer~~e~~~~~~~l~~iL~~Ga~k 384 (405)
++++++++|+++|++.+|..+++.+.+++..+|.+.++|+||+.|++.|+++|+||||||+++++|+ +|++||++|++|
T Consensus 228 ~~~~~~~~p~~~~l~~i~~~~~~~~~~e~~~~~~~~~~gdlK~~lae~i~~~L~PiRer~~~l~~~~-~l~~iL~~Ga~k 306 (326)
T d1i6la_ 228 IRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-ELDRVLDEGAEK 306 (326)
T ss_dssp CCCCTTTCHHHHHHHHHHHHHHCCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-HHHHHHHHHHHH
T ss_pred ccccccCCCCccHHHHHHHHcCCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhCCH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 699999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCC
Q 015509 385 AADIADATLNNVYQAMGFLR 404 (405)
Q Consensus 385 Ar~iA~~tl~~Vr~a~Gl~~ 404 (405)
||++|++||++||++|||.|
T Consensus 307 Ar~~A~~tl~~Vr~~~Gl~r 326 (326)
T d1i6la_ 307 ANRVASEMVRKMEQAMGLGR 326 (326)
T ss_dssp HHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999975
No 2
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-59 Score=472.91 Aligned_cols=273 Identities=18% Similarity=0.259 Sum_probs=229.8
Q ss_pred CCceEEEeeCCCCc-chhhhHHHHHH-HHHHhc----c----------C-CCcChHHHHHHHHHHHHHHHHcCCCCCceE
Q 015509 77 VKKRIVSGVQPTGS-IHLGNYLGAIK-NWIALQ----I----------T-LPYDTQQLSKATRETAAIYLACGIDNSKAS 139 (405)
Q Consensus 77 ~~~~i~sGi~PTG~-lHLGnylg~i~-~~~~lQ----i----------t-~~~d~~~l~~~~~~~~~~~lA~GiDp~k~~ 139 (405)
++++||||++|||. ||||||+++++ +|++.+ + + -..+++.+++++++++++|+||||||+|++
T Consensus 73 kp~~vytG~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~ 152 (386)
T d1r6ta2 73 KPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTF 152 (386)
T ss_dssp CCEEEEEEECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEE
T ss_pred CCeEEEeccCCCCchhHHHHHHHHHHHHHHHHhcccceEEEecchHhhhcccCCHHHHHHHHHHHHHHHHHhCCCccceE
Confidence 47899999999997 89999999984 686544 1 1 135788999999999999999999999999
Q ss_pred EEEcCCchhhhHHHHHHhccccHHHHhhhhcHHHHhHhhC-CCCCcchhhhhhHHHhhhhhccc-----------cceec
Q 015509 140 VFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAG-GENVGVALLTYPVLMASDILLYQ-----------SDFVP 207 (405)
Q Consensus 140 if~qS~v~~h~el~w~L~~~~~~~~l~R~~~~k~~~~~~~-~~~~~~g~l~YPvLQAADIl~~~-----------adlVp 207 (405)
||+||+|..+ +.|++.+.+ ++.|++++++..+..+ .+++++|+++||+|||||||+++ +++||
T Consensus 153 i~~~s~~~~~--l~~~~~~~~---~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvp 227 (386)
T d1r6ta2 153 IFSDLDYMGM--SSGFYKNVV---KIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIP 227 (386)
T ss_dssp EEEHHHHGGG--CTTHHHHHH---HHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEE
T ss_pred EEeCcHHHHH--HHHHHHHHH---HHHHhcchhHHHHhhccccCCcCcccccHHHHHHHHHHhcChhhhccccccccccc
Confidence 9999988544 344444433 5567788887766666 57889999999999999999987 56999
Q ss_pred cccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecCCCH
Q 015509 208 VGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPK 287 (405)
Q Consensus 208 vG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dsp 287 (405)
||.||+||++||||+|+||| +++|..++++ ++|+|+++.+|||||+| +|+|+|+|+|
T Consensus 228 vG~DQ~~h~~ltRDia~r~~------------------~~~p~~l~~~---~lpgL~G~~~KMSsS~~--~s~I~l~D~~ 284 (386)
T d1r6ta2 228 CAIDQDPYFRMTRDVAPRIG------------------YPKPALLHST---FFPALQGAQTKMSASDP--NSSIFLTDTA 284 (386)
T ss_dssp EEGGGHHHHHHHHHHGGGGT------------------CCCCEEEEEC---CCEETTEEEEECCTTST--TCCCBTTCCH
T ss_pred cchhHHHHHHHHHHHHHHhC------------------CCCceeeccc---cccCCCCcccccccCCC--CceeeecCCH
Confidence 99999999999999999988 6789988875 99999665679999997 4999999999
Q ss_pred HHHHHHhhcccCCCCCCcccC---CCCCCccchHHHHHHhh--CCCCHHHHHHHHh--cCCcchHHHHHHHHHHHHhhHH
Q 015509 288 DVIANKIKRCKTDSSAGLEFD---NLERPECNNLLSIYQLI--SGKTKGEVAEECQ--NMNWGTFKPLLTDALIEHLHPI 360 (405)
Q Consensus 288 e~I~kKI~kA~Td~~~~i~~~---~~~rpev~nll~i~~~~--t~~~~eel~~~y~--~~~~gdlK~~Lae~i~~~L~pi 360 (405)
++|++||++|+|++.....++ .+++|++++++.|+.++ +++++|+++++|. +++|+|||+.|++.|+++|+|+
T Consensus 285 ~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~~~ 364 (386)
T d1r6ta2 285 KQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEH 364 (386)
T ss_dssp HHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHHHHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhheeeecCCcccccccccCCCcchhHHHHHHHHHcCCHhHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999876543332 35789999999999887 4568999999997 5899999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHH
Q 015509 361 QVRYEEIMSDSAYLDKVLA 379 (405)
Q Consensus 361 rer~~e~~~~~~~l~~iL~ 379 (405)
|+||+++.+ +.++++|.
T Consensus 365 rekr~~~~~--~~v~~~l~ 381 (386)
T d1r6ta2 365 QARRKEVTD--EIVKEFMT 381 (386)
T ss_dssp HHHHTTCCH--HHHHHHTS
T ss_pred HHHHHHHHH--HHHHHHhc
Confidence 999998854 35777764
No 3
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.2e-55 Score=436.01 Aligned_cols=265 Identities=21% Similarity=0.212 Sum_probs=201.2
Q ss_pred CCceEEEeeCCCCcchhhhHHHHHHHHHHhc--------------cC-CCcCh-HHHHHHH----HHHHHHHHHcCCCCC
Q 015509 77 VKKRIVSGVQPTGSIHLGNYLGAIKNWIALQ--------------IT-LPYDT-QQLSKAT----RETAAIYLACGIDNS 136 (405)
Q Consensus 77 ~~~~i~sGi~PTG~lHLGnylg~i~~~~~lQ--------------it-~~~d~-~~l~~~~----~~~~~~~lA~GiDp~ 136 (405)
++++||+||+|||.+|||||+|+++.|.-+| ++ .+... .....+. ..+.+.|+|+|+||+
T Consensus 31 ~~~~vy~G~~PTg~lHlG~~l~~~~l~~~q~~g~~~~~~IaD~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~d~~ 110 (339)
T d1n3la_ 31 RELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLE 110 (339)
T ss_dssp SCCEEEEEECCSSCCBGGGHHHHHHHHHHHHTTCEEEEEECHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHHHTCCCT
T ss_pred CCCEEEEeeCCCCccHHHHHHHHHHHHHHHHCCCcEEEEecchhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhccChH
Confidence 4689999999999999999999986554333 11 11112 2222222 234577889999999
Q ss_pred ceEEEEcCCchhhhHHHHHHhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhccccceeccccchHHHH
Q 015509 137 KASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHL 216 (405)
Q Consensus 137 k~~if~qS~v~~h~el~w~L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~~~adlVpvG~DQ~~hl 216 (405)
|+.||+||+|+.+.++.|.+....+...+.++...+...... .+++++|+|+||+|||||||+|++|+||||.||++|+
T Consensus 111 k~~i~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~f~YP~lQaaDil~~~ad~v~~G~DQ~~~i 189 (339)
T d1n3la_ 111 KLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQ-VEHPLLSGLLYPGLQALDEEYLKVDAQFGGIDQRKIF 189 (339)
T ss_dssp TEEEEEGGGTTTSHHHHHHHHHHHTTSCHHHHHHHTTTTSCC-CSSCCHHHHHHHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred HheeeecChHhhhhhHHHHHhhHHHHHHHHHHHHHHHHHhcc-CCCCccccccccHHHHHHHHhccCCccccchhHHHHH
Confidence 999999999988887777666555555444554433222122 3678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecCCCHHHHHHHhhc
Q 015509 217 ELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKR 296 (405)
Q Consensus 217 eLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~kKI~k 296 (405)
+||||+|+|||+ +.|..++.+ ++|+| +| .|||||+| +|+|+|+|++++|++||++
T Consensus 190 ~l~rd~a~r~~~------------------~~~~~l~~p---ll~~l-~g-~kmsks~~--~~~I~l~D~~~~I~kKI~~ 244 (339)
T d1n3la_ 190 TFAEKYLPALGY------------------SKRVHLMNP---MVPGL-TG-SKMSSSEE--ESKIDLLDRKEDVKKKLKK 244 (339)
T ss_dssp HHHHHHGGGGTC------------------CCCEEEEEC---CCCCS-SC-C---------CCSCBTTCCHHHHHHHHHT
T ss_pred HHHHHHHhhhcc------------------Ccceeeeec---ccccc-cc-ccccccch--hhcccccCCHHHHHHHHhh
Confidence 999999999984 345556654 89998 66 58999986 5999999999999999999
Q ss_pred ccCCCCCCcccCCCCCCccchHHHHHHhh--------------------CCCCHHHHHHHHh--cCCcchHHHHHHHHHH
Q 015509 297 CKTDSSAGLEFDNLERPECNNLLSIYQLI--------------------SGKTKGEVAEECQ--NMNWGTFKPLLTDALI 354 (405)
Q Consensus 297 A~Td~~~~i~~~~~~rpev~nll~i~~~~--------------------t~~~~eel~~~y~--~~~~gdlK~~Lae~i~ 354 (405)
|+||+.. .+.+++++++.++ ++++++|++++|. +++++|||++|+++|+
T Consensus 245 a~td~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~y~~g~l~~~dlK~~la~~i~ 315 (339)
T d1n3la_ 245 AFCEPGN---------VENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALN 315 (339)
T ss_dssp CCCCTTC---------CSSCHHHHHHHHTTGGGTTCEEECCCGGGTCCEEESSHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred ccCCCCC---------cccCccccchhhhccchhhccccccHHHhcCCCCcCCHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9997643 4566777776643 3367999999997 5899999999999999
Q ss_pred HHhhHHHHHHHHHhcCHHHHHHHHHHH
Q 015509 355 EHLHPIQVRYEEIMSDSAYLDKVLADG 381 (405)
Q Consensus 355 ~~L~pirer~~e~~~~~~~l~~iL~~G 381 (405)
++|+|||++|+ ++ ++++++.+|
T Consensus 316 ~~l~pire~~~----~~-e~~~l~~~~ 337 (339)
T d1n3la_ 316 KLLDPIREKFN----TP-ALKKLASAA 337 (339)
T ss_dssp HHHHHHHHHTT----SH-HHHHHHHHH
T ss_pred HHHHHHHHHhC----CH-HHHHHHhcc
Confidence 99999999984 33 588888876
No 4
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=2.6e-53 Score=416.13 Aligned_cols=240 Identities=25% Similarity=0.340 Sum_probs=191.5
Q ss_pred CceEEEeeCCCCcchhhhHHHHHHHHHHhc----------------cCCCcChHHHHHHHHHHHHHHHHcCCCCCceEEE
Q 015509 78 KKRIVSGVQPTGSIHLGNYLGAIKNWIALQ----------------ITLPYDTQQLSKATRETAAIYLACGIDNSKASVF 141 (405)
Q Consensus 78 ~~~i~sGi~PTG~lHLGnylg~i~~~~~lQ----------------it~~~d~~~l~~~~~~~~~~~lA~GiDp~k~~if 141 (405)
++++|+||+|||++|||||+ .+.+|+++| ++-+.+++.+++++.+++++|+|+|+|| .++
T Consensus 28 ~~~~y~G~~PTG~lHlGh~v-~~~~~~~lq~~g~~~~~~IaD~~a~~~~~~~~~~~~~~~~~~~~~~~a~G~~~---~~~ 103 (306)
T d1j1ua_ 28 EKSAYIGFEPSGKIHLGHYL-QIKKMIDLQNAGFDIIILLADLHAYLNQKGELDEIRKIGDYNKKVFEAMGLKA---KYV 103 (306)
T ss_dssp SEEEEEEECCCSSCBHHHHH-HHHHHHHHHHTTEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTCCC---EEE
T ss_pred CCeEEEeECCCCcchHHHHH-HHHHHHHHHHCCCcEEEEeccHHHHhhhccchhhhhhhhhHHHHHHHhhhccc---ccc
Confidence 56899999999999999999 467999999 1224577889999999999999999998 467
Q ss_pred EcCCchhhhHHHH---HHhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhccccceeccccchHHHHHH
Q 015509 142 VQSHVRAHVELMW---LLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLEL 218 (405)
Q Consensus 142 ~qS~v~~h~el~w---~L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~~~adlVpvG~DQ~~hleL 218 (405)
+||+++.+.+..| .+++.++++++.+..+++ .+.+ ++.++|+|+||+||||||+++++|+||||.||++|+++
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~r~~-~~~~~~~~~YP~lQaaDil~~~~~~~~~G~DQ~~~~~l 179 (306)
T d1j1ua_ 104 YGSEFQLDKDYTLNVYRLALKTTLKRARRSMELI---ARED-ENPKVAEVIYPIMQVNDIHYLGVDVAVGGMEQRKIHML 179 (306)
T ss_dssp EGGGTTTSHHHHHHHHHHHHHSCHHHHHHHTTTT---SCCC-SSCCTHHHHHHHHHHHHHHHHTCSEEEEEGGGHHHHHH
T ss_pred ccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhhh---hhhh-hccccccccccchhhcchhhcCcceeccchhhHHHHHH
Confidence 7888766655544 455666666555554444 3333 77899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecCCCHHHHHHHhhccc
Q 015509 219 TRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCK 298 (405)
Q Consensus 219 tRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~kKI~kA~ 298 (405)
+||++++ +|..+.. ++|||| ||++|||||. +|+|+|+|+||+|++|||+|+
T Consensus 180 ~rdl~~~----------------------~~~~~~~---~~l~gl-dG~~KMSKS~---~n~I~L~D~~e~I~~KI~~a~ 230 (306)
T d1j1ua_ 180 ARELLPK----------------------KVVCIHN---PVLTGL-DGEGKMSSSK---GNFIAVDDSPEEIRAKIKKAY 230 (306)
T ss_dssp HHHHSSS----------------------CCEEEEE---CCCCCT-TCCC----------CSCBTTCCHHHHHHHHHHSC
T ss_pred hhhcccc----------------------cceeccc---ccccCc-cccccccccc---ccccccCCCHHHHHHHHhhee
Confidence 9999643 2444444 489998 7888999995 589999999999999999999
Q ss_pred CCCCCCcccCCCCCCccchHHHHHHhh-----------------CCCCHHHHHHHHh--cCCcchHHHHHHHHHHHHhhH
Q 015509 299 TDSSAGLEFDNLERPECNNLLSIYQLI-----------------SGKTKGEVAEECQ--NMNWGTFKPLLTDALIEHLHP 359 (405)
Q Consensus 299 Td~~~~i~~~~~~rpev~nll~i~~~~-----------------t~~~~eel~~~y~--~~~~gdlK~~Lae~i~~~L~p 359 (405)
||+.. .+.++++.++.++ ++.+++|++++|+ +++|++||+.||+.|+++|+|
T Consensus 231 td~~~---------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~g~l~~~~~K~~lae~i~~~l~p 301 (306)
T d1j1ua_ 231 CPAGV---------VEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEP 301 (306)
T ss_dssp CCTTC---------CTTCHHHHHHHHTCCSSEEECCCGGGTCCEEESSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCc---------ccCCCchHHHHHhhcccHhhccHHHHhccCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 98653 3455677666653 4578999999997 589999999999999999999
Q ss_pred HHHH
Q 015509 360 IQVR 363 (405)
Q Consensus 360 irer 363 (405)
||||
T Consensus 302 irer 305 (306)
T d1j1ua_ 302 IRKR 305 (306)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9987
No 5
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.3e-45 Score=364.74 Aligned_cols=239 Identities=23% Similarity=0.251 Sum_probs=183.3
Q ss_pred CCCceEEEeeCCCCc-chhhhHHHHHHHHHHhc------------cC-CCcChHH--------HHHHHHHHHHHHHHc--
Q 015509 76 SVKKRIVSGVQPTGS-IHLGNYLGAIKNWIALQ------------IT-LPYDTQQ--------LSKATRETAAIYLAC-- 131 (405)
Q Consensus 76 ~~~~~i~sGi~PTG~-lHLGnylg~i~~~~~lQ------------it-~~~d~~~--------l~~~~~~~~~~~lA~-- 131 (405)
.++++||+||+|||. ||||||+|++ +|..+| .+ +.+++.. ..+.+.++...+++.
T Consensus 31 g~~~~vY~G~~PTg~sLHlGh~v~~~-~~~~lq~~g~~~~~~iad~~a~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 109 (343)
T d1h3fa1 31 GRPLTVKLGADPTRPDLHLGHAVVLR-KMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAG 109 (343)
T ss_dssp CSCCEEEEEECTTCCSCBHHHHHHHH-HHHHHHHTTCEEEEEECCCC---------------------HHHHHHHHHHHT
T ss_pred CCCCEEEEeecCCCCcccHHHHHHHH-HHHHHHHCCCceEEEEechhhhhhcccchhhhhhhhhHHHHHHHHHHHHHHHh
Confidence 357899999999995 9999999964 788888 11 1222211 123344555554442
Q ss_pred ---CCCCCceEEEEcCCchhhhHHHHH--HhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhcccccee
Q 015509 132 ---GIDNSKASVFVQSHVRAHVELMWL--LSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFV 206 (405)
Q Consensus 132 ---GiDp~k~~if~qS~v~~h~el~w~--L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~~~adlV 206 (405)
+.++.+..|+.+++|..+..+.|. +++..+++++.+..+++..... .+++++|+|+||+||||||++|++|+|
T Consensus 110 ~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~YP~lQaaDi~~l~~~~v 187 (343)
T d1h3fa1 110 KILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEA--GIPISLHELLYPFAQAYDSVAIRADVE 187 (343)
T ss_dssp TTSCCCTTTEEEEETHHHHTTCBHHHHHHHHTTSBHHHHTTSHHHHHHHHT--TCCCBGGGGTHHHHHHHHHHHHTCSEE
T ss_pred hhhcccccchhheechHHHhhhhHHHHHHhcccceecchhhhhhhhhcccc--cccccchhhhhHHHHhhhhhhhccccc
Confidence 445677889999998766555444 4678999999998888865433 267899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecCCC
Q 015509 207 PVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDP 286 (405)
Q Consensus 207 pvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Ds 286 (405)
|||.||++|+++|||+|+|||+. .|..+.++ +|||| +|++|||||. +|+|+|+|+
T Consensus 188 p~G~DQ~~~i~l~Rdla~r~~~~------------------~~~~~~~p---~L~gl-dG~~KMSKS~---~naI~L~ds 242 (343)
T d1h3fa1 188 MGGTDQRFNLLVGREVQRAYGQS------------------PQVCFLMP---LLVGL-DGREKMSKSL---DNYIGLTEP 242 (343)
T ss_dssp EEEGGGHHHHHHHHHHHHHTTCC------------------CCEEEEEC---CCBCT-TSSSBCCGGG---TCCCBTTSC
T ss_pred ccccchHHHHHHHHHHHhhcCcc------------------ccceeecc---ccccc-cccchhhccc---ccceeeech
Confidence 99999999999999999999953 35555554 89998 7778999995 589999999
Q ss_pred HHHHHHHhhcccCCCCCCcccCCCCCCccchHHHHHHhhCCCCHHHHHHHHhcCCcchHHHHHHHHHHHHhhH
Q 015509 287 KDVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGKTKGEVAEECQNMNWGTFKPLLTDALIEHLHP 359 (405)
Q Consensus 287 pe~I~kKI~kA~Td~~~~i~~~~~~rpev~nll~i~~~~t~~~~eel~~~y~~~~~gdlK~~Lae~i~~~L~p 359 (405)
|++|++|||++ +| +.+.+|+++||+.+.+||++-+.. ++.++|+.||+.|+..++.
T Consensus 243 p~~i~~Ki~~~-~D---------------~~v~~~~~~~t~~~~~ei~~~~~~-~~~~~k~~La~~i~~~~~~ 298 (343)
T d1h3fa1 243 PEAMFKKLMRV-PD---------------PLLPSYFRLLTDLEEEEIEALLKA-GPVPAHRVLARLLTAAYAL 298 (343)
T ss_dssp HHHHHHHHHTS-CG---------------GGHHHHHHHHCCCCHHHHHHHHHH-CHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHhcC-Cc---------------cchhhHHHHccCCCHHHHHHHHHh-CCHHHHHHHHHHHHHHHcC
Confidence 99999999985 32 236778888999889998876653 6789999999999987753
No 6
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=99.96 E-value=1.6e-28 Score=241.22 Aligned_cols=237 Identities=14% Similarity=0.151 Sum_probs=176.4
Q ss_pred CCceEEEeeCCCCc-chhhhHHHHHHHHHHhc------------cC-CCcCh------------HHHHHHHHHHHHHHHH
Q 015509 77 VKKRIVSGVQPTGS-IHLGNYLGAIKNWIALQ------------IT-LPYDT------------QQLSKATRETAAIYLA 130 (405)
Q Consensus 77 ~~~~i~sGi~PTG~-lHLGnylg~i~~~~~lQ------------it-~~~d~------------~~l~~~~~~~~~~~lA 130 (405)
+++++|+|++|||. +||||+++.+ ...++| .| ..+|| +.+.++...+...+..
T Consensus 30 ~~~~~Y~G~DPTa~sLHlGhlv~l~-~l~~~q~~Gh~~i~LiG~~T~~iGDPsgk~~~R~~l~~~~i~~n~~~~~~~~~~ 108 (323)
T d1jila_ 30 EQVTLYCGADPTADSLHIGHLLPFL-TLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHN 108 (323)
T ss_dssp SCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcccCCCccccHHHHHHHH-HHHHHHHhCCceEEeehhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhhhh
Confidence 46899999999998 9999999876 333355 12 23443 3455555444444333
Q ss_pred c-CC-CCCceEEEEcCCchhh---hHHHHHHhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhc----c
Q 015509 131 C-GI-DNSKASVFVQSHVRAH---VELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILL----Y 201 (405)
Q Consensus 131 ~-Gi-Dp~k~~if~qS~v~~h---~el~w~L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~----~ 201 (405)
. .+ ++.++.++.+++|... .+..-.++..++++++.+.-.++.. .. .++++.+|+||+||+.|+++ +
T Consensus 109 ~~~~~~~~~~~i~~n~~w~~~~~~~~~l~~~~~~~~v~~ml~~d~~~~R---~~-~~is~~Ef~YpllQ~~Df~~l~~~~ 184 (323)
T d1jila_ 109 IFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSR---LE-HGISYTEFTYTILQAIDFGHLNREL 184 (323)
T ss_dssp HSCCSSSSSCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTCGGGHHH---HT-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccceEEechhhhhccchHHHHHHHHhhhhhhhHHHHhHHHHHH---hc-ccccHhhHHHHHHHHHHHHHHHHHh
Confidence 2 12 4678889999987432 2333345678999999998888743 32 67899999999999999987 6
Q ss_pred ccceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCcee
Q 015509 202 QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 281 (405)
Q Consensus 202 ~adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 281 (405)
++|++.+|.||+.++.++||+.+++. | ..|...++. +.+.+. +| +|||||. +|+|
T Consensus 185 ~~~iqiGGsDQ~~Ni~~Grdl~~~~~---~---------------~~~~~~it~--pLl~~~-~G-~Km~KS~---~n~i 239 (323)
T d1jila_ 185 NCKIQVGGSDQWGNITSGIELMRRMY---G---------------QTDAYGLTI--PLVTKS-DG-KKFGKSE---SGAV 239 (323)
T ss_dssp CEEEEEEEGGGHHHHHHHHHHHHHHH---C---------------CCCCEEEEE--CCCBCT-TS-CBTTBCS---SSBC
T ss_pred hchhhhhccccHHHhhhhhhhhhhhc---c---------------cccceEEec--ccccch-hh-hhhhhcC---CCCe
Confidence 89999999999999999999999964 1 234444443 466665 77 7999996 6899
Q ss_pred ecCC---CHHHHHHHhhcccCCCCCCcccCCCCCCccchHHHHHHhhCCCC---HHHHHHHHh-cCCcchHHHHHHHHHH
Q 015509 282 NLLD---PKDVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGKT---KGEVAEECQ-NMNWGTFKPLLTDALI 354 (405)
Q Consensus 282 ~L~D---spe~I~kKI~kA~Td~~~~i~~~~~~rpev~nll~i~~~~t~~~---~eel~~~y~-~~~~gdlK~~Lae~i~ 354 (405)
+|.+ +|+++++|+|+... ..+..|+.+||+.+ +++|++++. +.++.++|+.||+.|+
T Consensus 240 ~l~~~~tsP~~~y~k~~n~~D----------------~~i~~yl~~~T~l~~~ei~~l~~~~~~~~~pr~~Kk~LA~ei~ 303 (323)
T d1jila_ 240 WLDAEKTSPYEFYQFWINQSD----------------EDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVT 303 (323)
T ss_dssp BSSTTTSCHHHHHHHHHTCCH----------------HHHHHHHHHHCCCCHHHHHHHHHHHHHCGGGCHHHHHHHHHHH
T ss_pred eeecccCChHHHHHHhhcCCH----------------HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9987 69999999998633 34777888887765 555566664 5689999999999999
Q ss_pred HHhhH
Q 015509 355 EHLHP 359 (405)
Q Consensus 355 ~~L~p 359 (405)
+.++.
T Consensus 304 ~~~HG 308 (323)
T d1jila_ 304 KFIHG 308 (323)
T ss_dssp HHHHC
T ss_pred HHHCC
Confidence 99976
No 7
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
Probab=99.94 E-value=8.8e-27 Score=228.25 Aligned_cols=239 Identities=14% Similarity=0.164 Sum_probs=178.9
Q ss_pred CCceEEEeeCCCCc-chhhhHHHHH-HHHHHhc----------cC-CCcChH------------HHHHHHH---HHHHHH
Q 015509 77 VKKRIVSGVQPTGS-IHLGNYLGAI-KNWIALQ----------IT-LPYDTQ------------QLSKATR---ETAAIY 128 (405)
Q Consensus 77 ~~~~i~sGi~PTG~-lHLGnylg~i-~~~~~lQ----------it-~~~d~~------------~l~~~~~---~~~~~~ 128 (405)
+++++|+|++||+. +||||+++++ ..|++.. .| ..+||. .+++++. +.+..+
T Consensus 29 ~~~~~Y~G~DPTa~sLHlGhlv~l~~l~~~q~~Gh~~i~LiG~~T~~IGDPsgk~~eR~~l~~e~i~~n~~~~~~q~~~~ 108 (319)
T d2ts1a_ 29 ERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRF 108 (319)
T ss_dssp SCCEEEEEECCSSSSCBGGGHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHcCCceeEEeeehhhccCCCcccchhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 47899999999998 9999999976 5553321 12 234443 3444433 333444
Q ss_pred HHcCCCCCceEEEEcCCchhh---hHHHHHHhccccHHHHhhhhcHHHHhHhhCCCCCcchhhhhhHHHhhhhhcc----
Q 015509 129 LACGIDNSKASVFVQSHVRAH---VELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLY---- 201 (405)
Q Consensus 129 lA~GiDp~k~~if~qS~v~~h---~el~w~L~~~~~~~~l~R~~~~k~~~~~~~~~~~~~g~l~YPvLQAADIl~~---- 201 (405)
++.+.++++++|+.+++|... .+..-.++..++++++.+.-.|+.+ .. +++++.+|+||+|||.|.+++
T Consensus 109 ~~~~~~~~~~~iv~N~~w~~~~~~~~~l~~~g~~~tv~~ml~rd~v~~R---~~-~~is~~Ef~Y~llQayDf~~l~~~~ 184 (319)
T d2ts1a_ 109 LDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSR---IE-TGISFTEFSYMMLQAYDFLRLYETE 184 (319)
T ss_dssp SCSSCSSSCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTSHHHHTT---TT-TCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccceeehHHHHhhHHHHHHHHHHccccchhhhhhhHHHHHh---cc-cCcchhhhHHHHHHHHHHHHHhhcc
Confidence 666778899999999998532 2333336678999988888777743 22 679999999999999999997
Q ss_pred ccceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCcee
Q 015509 202 QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 281 (405)
Q Consensus 202 ~adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 281 (405)
+++++.+|.||+.++...|++.++++ | +.+...++. |.+++. +| +|||||. +|+|
T Consensus 185 ~~~~qiGGsDQ~gNi~~G~dli~~~~---~---------------~~~~~~lT~--PLL~~~-~G-~K~~ks~---~n~i 239 (319)
T d2ts1a_ 185 GCRLQIGGSDQWGNITAGLELIRKTK---G---------------EARAFGLTI--PLVTKA-DG-TKFGKTE---SGTI 239 (319)
T ss_dssp CEEEEEEEGGGHHHHHHHHHHHHHHH---C-----------------CCEEEEE--CCCCCT-TS-CCTTCCS---SCCC
T ss_pred CCchhhccchhhhHHHHHHHHHHHhc---c---------------cccceEeec--cccccc-cc-ceeeecC---CCCc
Confidence 89999999999999999999998864 1 123332332 488886 78 5999996 5899
Q ss_pred ecCC---CHHHHHHHhhcccCCCCCCcccCCCCCCccchHHHHHHhhCCCCHH---HHHHHHh-cCCcchHHHHHHHHHH
Q 015509 282 NLLD---PKDVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGKTKG---EVAEECQ-NMNWGTFKPLLTDALI 354 (405)
Q Consensus 282 ~L~D---spe~I~kKI~kA~Td~~~~i~~~~~~rpev~nll~i~~~~t~~~~e---el~~~y~-~~~~gdlK~~Lae~i~ 354 (405)
+|++ +|.++++|+++.-. ..+..|+++||+.+.+ +|.+++. +-++.++|+.||+.|+
T Consensus 240 ~l~~~~tsp~~~yq~~~n~~D----------------~~v~~yl~~~T~~~~eeI~~i~~~~~~~~~~r~~K~~LA~eit 303 (319)
T d2ts1a_ 240 WLDKEKTSPYEFYQFWINTDD----------------RDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVT 303 (319)
T ss_dssp BSSTTTSCHHHHHHHHHTCCH----------------HHHHHHHHHHCCCCHHHHHHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHhcCCCH----------------HHHHHHHHHHhcCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9986 69999999987633 3577888888876554 5556654 5789999999999999
Q ss_pred HHhhHH
Q 015509 355 EHLHPI 360 (405)
Q Consensus 355 ~~L~pi 360 (405)
..++.-
T Consensus 304 ~l~HG~ 309 (319)
T d2ts1a_ 304 KLVHGE 309 (319)
T ss_dssp HHHHCH
T ss_pred HHhCCH
Confidence 999874
No 8
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]}
Probab=98.34 E-value=1.6e-06 Score=82.32 Aligned_cols=167 Identities=17% Similarity=0.115 Sum_probs=98.0
Q ss_pred CCCCcchhhhHHHHHHHHHHhc---------cCCCcChHHHHHHHHHHHHHHHHcCCCCCce-------EEEEcCCc-hh
Q 015509 86 QPTGSIHLGNYLGAIKNWIALQ---------ITLPYDTQQLSKATRETAAIYLACGIDNSKA-------SVFVQSHV-RA 148 (405)
Q Consensus 86 ~PTG~lHLGnylg~i~~~~~lQ---------it~~~d~~~l~~~~~~~~~~~lA~GiDp~k~-------~if~qS~v-~~ 148 (405)
.|||.|||||...++-+|..-+ |...+......+....+.+++..+||++|.. .++.||+- ..
T Consensus 9 sPtG~lHiG~~rtal~n~~~Ak~~~G~~iLRidDtD~~R~~~~~~~~I~~dL~wLgi~wD~~p~~~~~~~~~~qS~r~~~ 88 (305)
T d1j09a2 9 SPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVGGPHGPYRQSERLPL 88 (305)
T ss_dssp CCSSSCBHHHHHHHHHHHHHHHHTTCEEEECBCCCCTTSCCTTHHHHHHHHHHHTTCCCSBBTTTBCTTCCCBGGGCHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHcCCEEEEEeCcCCCccCchHHHHHHHHHHHHHhcCcccCCcCCCCCcceeeecchhH
Confidence 4679999999999998885543 2222222333455677788888999997742 57899984 33
Q ss_pred hhHHHHH-------HhccccHHHHhhhhc-------------H--HHHhHhhC-----------CCCC------------
Q 015509 149 HVELMWL-------LSSATPIGWLNKMIQ-------------F--KEKSHKAG-----------GENV------------ 183 (405)
Q Consensus 149 h~el~w~-------L~~~~~~~~l~R~~~-------------~--k~~~~~~~-----------~~~~------------ 183 (405)
+.+.... +.|.++-.++..... - .+.....+ .+..
T Consensus 89 y~~~~~~Li~~g~aY~C~cs~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~k~~~~~~~~~~d~i~~~~~~ 168 (305)
T d1j09a2 89 YQKYAEELLKRGWAYRAFETPEELEQIRKEKGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEVKDELRGVVVY 168 (305)
T ss_dssp HHHHHHHHHHHTSEEEECCCHHHHHHHHHHHSSCCCGGGGSCHHHHHHHHHTTCCCEEEECCCSSCEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHcCCeeeccccchhhhhhhhhccCCCCccccchhhhHHHHhhcCCcceEEEeccccCCccccchhhceeee
Confidence 3333222 346666666542210 0 00000000 0000
Q ss_pred ---cc---------hhhhhhHHHhhhhhccccceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCcc
Q 015509 184 ---GV---------ALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEP 251 (405)
Q Consensus 184 ---~~---------g~l~YPvLQAADIl~~~adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~ 251 (405)
.+ |..+|=+--+.|=...+.++|.-|.|-..+-..=.-+.+.++ ++.|..
T Consensus 169 ~~~~~~D~vi~r~dg~p~Y~~A~vvDD~~~githviRG~Dl~~~t~~q~~l~~~Lg------------------~~~p~~ 230 (305)
T d1j09a2 169 DNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFG------------------WEAPRF 230 (305)
T ss_dssp EGGGSCCCEEECTTSCBCHHHHHHHHHHHTTCCEEEEEGGGGGGHHHHHHHHHHHT------------------CCCCEE
T ss_pred ccccCCCeEEECCCCCeehHHHHHHHHHHccCccccccccceeccHHHHHHHHhhc------------------CCCCce
Confidence 00 233333333344446789999999998776666666666655 567776
Q ss_pred ccCCCCcccccCCCCCCccccCCC
Q 015509 252 LIPPAGARVMSLTDGLSKMSKSAP 275 (405)
Q Consensus 252 l~~~~~~~l~sL~dg~~KMSKS~p 275 (405)
.+.+ .+... +| +||||++.
T Consensus 231 ~h~~---l~~~~-~g-~KLSKr~~ 249 (305)
T d1j09a2 231 YHMP---LLRNP-DK-TKISKRKS 249 (305)
T ss_dssp EEEC---CCBCT-TS-CBCCTTTS
T ss_pred eeec---ccccC-cc-ccccccCC
Confidence 6654 55564 56 69999974
No 9
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]}
Probab=98.28 E-value=1.8e-06 Score=81.31 Aligned_cols=166 Identities=16% Similarity=0.197 Sum_probs=91.4
Q ss_pred CCCCcchhhhHHHHHHHHHHhc-------c--CCCcChHHHHHHHHHHHHHHHHcCCCCCceEEEEcCC-chhhhHHHHH
Q 015509 86 QPTGSIHLGNYLGAIKNWIALQ-------I--TLPYDTQQLSKATRETAAIYLACGIDNSKASVFVQSH-VRAHVELMWL 155 (405)
Q Consensus 86 ~PTG~lHLGnylg~i~~~~~lQ-------i--t~~~d~~~l~~~~~~~~~~~lA~GiDp~k~~if~qS~-v~~h~el~w~ 155 (405)
.|||.|||||...++-+|..-. + .-.+......+....+..++..+|++.+. .++.||+ ...+.+..-.
T Consensus 10 sPtG~lHiG~~rtal~n~~~Ak~~~G~~iLRieDtD~~R~~~~~~~~I~~dL~wlgl~~d~-~~~~QS~r~~~Y~~~~~~ 88 (286)
T d1nzja_ 10 SPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDG-DVLWQSQRHDAYREALAW 88 (286)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCSCGGGSCTTHHHHHHHHHHHTTCCCSS-CCEEGGGCHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCCCCCCcCCHHHHHHHHHHHHHhhhcccc-ccchhHHHHHHHHHHHHH
Confidence 3679999999999999995543 2 22222333445667788888899998874 4788998 3444333332
Q ss_pred -------HhccccHHHHhhhhcHHHHhHh-hC--C---------------------------------CCC---cchhhh
Q 015509 156 -------LSSATPIGWLNKMIQFKEKSHK-AG--G---------------------------------ENV---GVALLT 189 (405)
Q Consensus 156 -------L~~~~~~~~l~R~~~~k~~~~~-~~--~---------------------------------~~~---~~g~l~ 189 (405)
+.|.++-.+++..-........ .. . +-+ .=|..+
T Consensus 89 L~~~g~aY~C~ct~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~R~dg~pt 168 (286)
T d1nzja_ 89 LHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFA 168 (286)
T ss_dssp HHHTTCEEEECCCHHHHHHTTSSCCCTTTTTCCCSTTCEEEECCSSCCCEEEETTTEEEECCHHHHHSCCEEECTTSCBC
T ss_pred HHHcCCcccccccHHHHHhhccccccccccccchhhhhhhhhcccccccceeeeeeeeeeeccccccccccccCCCCCee
Confidence 3467776666543221110000 00 0 000 012222
Q ss_pred hhHHHhhhhhccccceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCc
Q 015509 190 YPVLMASDILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSK 269 (405)
Q Consensus 190 YPvLQAADIl~~~adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~K 269 (405)
|=+-=+-|=...+.++|.=|.|....-..=..|.+.|+ ++.|+..+.+ +|.+. +| +|
T Consensus 169 Y~lA~vVDD~~~gIThViRG~D~l~st~~Q~~L~~~lg------------------~~~P~y~H~p---li~~~-~g-~K 225 (286)
T d1nzja_ 169 YNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFG------------------WKVPDYIHLP---LALNP-QG-AK 225 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGHHHHHHHHHHHHHHT------------------CCCCEEEEEC---BCCC-------
T ss_pred eeehhhhcccccccceecccccccchHHHHHHHHHhhC------------------CCccceeecc---eEEcc-CC-cc
Confidence 22222333334579999999998877766666766665 6778877765 67665 66 69
Q ss_pred cccCCC
Q 015509 270 MSKSAP 275 (405)
Q Consensus 270 MSKS~p 275 (405)
|||++.
T Consensus 226 LSKr~~ 231 (286)
T d1nzja_ 226 LSKQNH 231 (286)
T ss_dssp ------
T ss_pred cccccC
Confidence 999974
No 10
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]}
Probab=97.07 E-value=0.00067 Score=64.57 Aligned_cols=87 Identities=11% Similarity=0.022 Sum_probs=56.1
Q ss_pred eEEEeeCCC--CcchhhhHHHHHHHHHHhc-------cCC--CcChHHHHHHHHHHHHHHHHcCCCCCceEEEEcCCchh
Q 015509 80 RIVSGVQPT--GSIHLGNYLGAIKNWIALQ-------ITL--PYDTQQLSKATRETAAIYLACGIDNSKASVFVQSHVRA 148 (405)
Q Consensus 80 ~i~sGi~PT--G~lHLGnylg~i~~~~~lQ-------it~--~~d~~~l~~~~~~~~~~~lA~GiDp~k~~if~qS~v~~ 148 (405)
.|.|=|.|| |.|||||...++-+|.--. +-+ .+......+....+..++.-+||+.+. .++.||+-.+
T Consensus 19 ~v~tRFAPSPTG~LHiG~~rtal~n~l~Ak~~~G~fiLRIEDtD~~R~~~~~~~~I~~dL~WLGl~wD~-~~~~QS~r~~ 97 (331)
T d1gtra2 19 TVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSG-NVRYSSDYFD 97 (331)
T ss_dssp SCEEEECCCSSSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGGGCCHHHHHHHHHHHHHTTCCCSS-SCEEGGGGHH
T ss_pred eEEEEeCCCCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCcCCCCcccchHHHHHHHHHHHHhccccc-cceecchHHH
Confidence 455566655 9999999999998885543 222 233334456677888889999999864 3567998432
Q ss_pred -hhHHHHH-------HhccccHHHHhh
Q 015509 149 -HVELMWL-------LSSATPIGWLNK 167 (405)
Q Consensus 149 -h~el~w~-------L~~~~~~~~l~R 167 (405)
|.+.... +.|.++-.+++.
T Consensus 98 ~Y~~~~~~L~~~G~aY~C~cs~eel~~ 124 (331)
T d1gtra2 98 QLHAYAIELINKGLAYVDELTPEQIRE 124 (331)
T ss_dssp HHHHHHHHHHHTTSEEEECCCHHHHHH
T ss_pred HHHHHHHhhhhcCCcccccccHHHHHH
Confidence 2222211 457777666653
No 11
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=90.36 E-value=0.46 Score=43.30 Aligned_cols=59 Identities=20% Similarity=0.342 Sum_probs=34.6
Q ss_pred CceEEEee-CCCCcchhhhHHHHH-----HHHHHhc---c------CCCc------------ChHH-HHHHHHHHHHHHH
Q 015509 78 KKRIVSGV-QPTGSIHLGNYLGAI-----KNWIALQ---I------TLPY------------DTQQ-LSKATRETAAIYL 129 (405)
Q Consensus 78 ~~~i~sGi-~PTG~lHLGnylg~i-----~~~~~lQ---i------t~~~------------d~~~-l~~~~~~~~~~~l 129 (405)
+..|-+++ -|+|.+||||..+.+ ..|.+++ + +-.+ ++.. ..+.+.....++.
T Consensus 3 ~~~i~~~~P~~nG~lHiGHar~~v~~D~l~R~lr~~G~~V~~v~~~dd~g~ki~~~a~~~g~~~~~~~~~~~~~~~~~~~ 82 (350)
T d1pfva2 3 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFA 82 (350)
T ss_dssp EEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCCCCCCccccccHHHHHHHHHHHHHHhcCCceEecCccCCccHHHHHHHHHcCCCHHHHHHhHHHHHHHHHH
Confidence 34444554 455999999988754 3344444 1 1112 2222 2344556677788
Q ss_pred HcCCCCC
Q 015509 130 ACGIDNS 136 (405)
Q Consensus 130 A~GiDp~ 136 (405)
++|+|.+
T Consensus 83 ~l~i~~~ 89 (350)
T d1pfva2 83 GFNISYD 89 (350)
T ss_dssp HTTCCCS
T ss_pred HcCCCcc
Confidence 9999876
No 12
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=90.08 E-value=0.25 Score=44.87 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=19.0
Q ss_pred CCCceEE-EeeCCCCcchhhhHHHHH
Q 015509 76 SVKKRIV-SGVQPTGSIHLGNYLGAI 100 (405)
Q Consensus 76 ~~~~~i~-sGi~PTG~lHLGnylg~i 100 (405)
|.++.+| ||+-|+|.|||||..+++
T Consensus 20 ~~~~~~yv~Gptv~g~~HIGH~R~av 45 (315)
T d1li5a2 20 AGEVGMYVCGITVYDLCHIGHGRTFV 45 (315)
T ss_dssp TTEEEEEECCCBSSSCCBHHHHHHHH
T ss_pred CCeEEEEecCCcCCCCcccchhHHHH
Confidence 4345555 588888999999998865
No 13
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=88.74 E-value=0.08 Score=51.29 Aligned_cols=30 Identities=23% Similarity=0.434 Sum_probs=20.3
Q ss_pred CceEEEee-CCCCcchhhhHHHHH-----HHHHHhc
Q 015509 78 KKRIVSGV-QPTGSIHLGNYLGAI-----KNWIALQ 107 (405)
Q Consensus 78 ~~~i~sGi-~PTG~lHLGnylg~i-----~~~~~lQ 107 (405)
++.+..|- -|+|.|||||.++.+ ..|.+++
T Consensus 49 ~f~~~~~pPy~nG~lHiGH~~~~~~~Dv~~Ry~rm~ 84 (450)
T d1ffya3 49 TFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQ 84 (450)
T ss_dssp BCCEECCCCBSSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cEEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHhc
Confidence 46666665 235999999998744 3455555
No 14
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=86.69 E-value=0.14 Score=44.94 Aligned_cols=23 Identities=35% Similarity=0.713 Sum_probs=18.9
Q ss_pred CceEEEeeCCCCcchhhhHHHHH
Q 015509 78 KKRIVSGVQPTGSIHLGNYLGAI 100 (405)
Q Consensus 78 ~~~i~sGi~PTG~lHLGnylg~i 100 (405)
+..+-||+-|||.+||||.-.++
T Consensus 19 ~~v~~~~~~PnG~lHIGHlr~~i 41 (317)
T d1irxa2 19 KYVVESGITPSGYVHVGNFRELF 41 (317)
T ss_dssp EEEEEEEECCSSCCCHHHHHHHH
T ss_pred eEEEECCCCCCCCccccccHHHH
Confidence 45666899999999999987654
No 15
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=86.18 E-value=0.27 Score=44.47 Aligned_cols=60 Identities=15% Similarity=0.073 Sum_probs=34.0
Q ss_pred ccceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCcee
Q 015509 202 QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 281 (405)
Q Consensus 202 ~adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 281 (405)
..++.+.|.|+.......-.. .... ++. .+.+..++.. .+..+ +| +|||||. +|.|
T Consensus 251 ~~~~~~~g~d~~~~~~~~~~~-~~~~--~~~-------------~~~~~v~~~~---~~l~~-~G-~KMSKS~---Gn~i 306 (348)
T d2d5ba2 251 PHAWHLIGKDILKPHAVFWPT-MLKA--AGI-------------PMYRHLNVGG---FLLGP-DG-RKMSKTL---GNVV 306 (348)
T ss_dssp GGEEEEEEGGGHHHHHTHHHH-HHHH--HTC-------------CCCSEEEEEC---CEECT-TS-SCCCTTT---TCCC
T ss_pred chheeeehhhccchhhhhhhh-hccc--ccc-------------CCCCEEEeCc---eEEcc-cC-CCCcCCC---Cccc
Confidence 356778888888776553333 2222 121 1223333333 44455 67 5999997 6788
Q ss_pred ecCC
Q 015509 282 NLLD 285 (405)
Q Consensus 282 ~L~D 285 (405)
.+.|
T Consensus 307 ~~~e 310 (348)
T d2d5ba2 307 DPFA 310 (348)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7643
No 16
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=85.52 E-value=0.46 Score=42.88 Aligned_cols=51 Identities=16% Similarity=0.251 Sum_probs=30.7
Q ss_pred CCCcchhhhHHHHH-----HHHHHhc---c------CCCc------------ChHH-HHHHHHHHHHHHHHcCCCCCc
Q 015509 87 PTGSIHLGNYLGAI-----KNWIALQ---I------TLPY------------DTQQ-LSKATRETAAIYLACGIDNSK 137 (405)
Q Consensus 87 PTG~lHLGnylg~i-----~~~~~lQ---i------t~~~------------d~~~-l~~~~~~~~~~~lA~GiDp~k 137 (405)
|||.|||||..+.+ ..+.+++ + +-.+ +++. ...+..+....+-+.|++++.
T Consensus 14 pnG~lHiGH~r~~v~~D~l~R~lr~~G~~V~~v~g~D~~g~~i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (348)
T d2d5ba2 14 VNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYDD 91 (348)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTCCCSE
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhcCCCeEecCcCCCCCHHHHHHHHHcCCCHHHhhhhHHHHHHHHHHhcCccccc
Confidence 67999999977654 3444444 1 1112 2222 344455566677788998874
No 17
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=85.29 E-value=0.15 Score=48.01 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=17.0
Q ss_pred CCceEEEee--CCCCcchhhhHHHHH
Q 015509 77 VKKRIVSGV--QPTGSIHLGNYLGAI 100 (405)
Q Consensus 77 ~~~~i~sGi--~PTG~lHLGnylg~i 100 (405)
++..+++.- =|+|.|||||..+.+
T Consensus 33 ~~~f~i~~~pPy~NG~lHlGH~~~yv 58 (425)
T d1ivsa4 33 KPPFVIFMPPPNVTGSLHMGHALDNS 58 (425)
T ss_dssp SCEEEEECCCCBSSSCCCHHHHHHHH
T ss_pred CCcEEEEcCCCCCCCCchhhHHHHHH
Confidence 445566663 455999999998865
No 18
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=82.30 E-value=0.3 Score=46.20 Aligned_cols=29 Identities=10% Similarity=0.182 Sum_probs=18.8
Q ss_pred ceEEE-eeCCCCcchhhhHHHHH-----HHHHHhc
Q 015509 79 KRIVS-GVQPTGSIHLGNYLGAI-----KNWIALQ 107 (405)
Q Consensus 79 ~~i~s-Gi~PTG~lHLGnylg~i-----~~~~~lQ 107 (405)
++|++ --=|+|.+||||..+.+ ..+.+++
T Consensus 40 f~i~~~pPy~nG~lHiGH~~~~v~~Dv~~Ry~r~~ 74 (452)
T d1ilea3 40 YTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMR 74 (452)
T ss_dssp CCBCCCCCCTTSCCCTTHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCCCCcchhhhHHHHHHHHHHHHHHHcC
Confidence 44444 23467999999988754 4455555
No 19
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=75.05 E-value=0.35 Score=42.12 Aligned_cols=15 Identities=47% Similarity=0.364 Sum_probs=4.7
Q ss_pred CccccCCCCCCceeecCC
Q 015509 268 SKMSKSAPSDQSRINLLD 285 (405)
Q Consensus 268 ~KMSKS~p~~~s~I~L~D 285 (405)
+|||||. +|.|.+.|
T Consensus 276 ~KMSkrk---Gn~I~~~d 290 (317)
T d1irxa2 276 GKMSGSK---GNVILLSD 290 (317)
T ss_dssp -----------CCCCHHH
T ss_pred ccccCCC---CccccHHH
Confidence 5999997 67887643
No 20
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=74.02 E-value=4.2 Score=37.51 Aligned_cols=58 Identities=26% Similarity=0.335 Sum_probs=31.3
Q ss_pred cceeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCC-ccccCCCCcccccCCCCCCccccCCCCCCcee
Q 015509 203 SDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVP-EPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 281 (405)
Q Consensus 203 adlVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P-~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 281 (405)
+|+..+|.|+..++ ....+|.-... ++ ..| ..++.. .++... +| +|||||. +|.|
T Consensus 329 ~di~~~G~Di~~~h-~~~~~a~~~~~-~~---------------~~p~~~v~~h--g~~L~~-~G-~KMSKS~---Gn~I 384 (425)
T d1ivsa4 329 GDVLVTGYDILFLW-VSRMEVSGYHF-MG---------------ERPFKTVLLH--GLVLDE-KG-QKMSKSK---GNVI 384 (425)
T ss_dssp BSCEEEEGGGTTTT-HHHHHHHHHHH-SS---------------SCSBSEEEEE--CCEECT-TS-SBCBTTT---TBCC
T ss_pred ceEEEEEehhhhHH-HHHHHHHHHHh-cC---------------CCccceEEEc--ceEECC-CC-CCcCCCC---CCCc
Confidence 47888999986544 22233333221 12 223 222222 144444 67 6999997 6888
Q ss_pred ecC
Q 015509 282 NLL 284 (405)
Q Consensus 282 ~L~ 284 (405)
.+.
T Consensus 385 ~~~ 387 (425)
T d1ivsa4 385 DPL 387 (425)
T ss_dssp CHH
T ss_pred CHH
Confidence 653
No 21
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]}
Probab=69.37 E-value=2.8 Score=39.52 Aligned_cols=30 Identities=20% Similarity=0.432 Sum_probs=20.1
Q ss_pred CceEEEee-CCCCcchhhhHHHHH-----HHHHHhc
Q 015509 78 KKRIVSGV-QPTGSIHLGNYLGAI-----KNWIALQ 107 (405)
Q Consensus 78 ~~~i~sGi-~PTG~lHLGnylg~i-----~~~~~lQ 107 (405)
++.|.+|. =+||.|||||.++.+ ..|.+++
T Consensus 34 ~~~i~~~pP~~nG~lHiGH~~~~~~~D~~~R~~rm~ 69 (494)
T d1h3na3 34 KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQ 69 (494)
T ss_dssp EEEEEECCCCSSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEeCCCCCCCchhhhHHHHHHHHHHHHHHHHcc
Confidence 36677773 235999999999743 4455565
No 22
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=68.46 E-value=1.2 Score=40.06 Aligned_cols=28 Identities=25% Similarity=0.250 Sum_probs=21.1
Q ss_pred CCCCccccCCCCCCceeecCC-----CHHHHHHHhhc
Q 015509 265 DGLSKMSKSAPSDQSRINLLD-----PKDVIANKIKR 296 (405)
Q Consensus 265 dg~~KMSKS~p~~~s~I~L~D-----spe~I~kKI~k 296 (405)
+| +|||||. +|.|.+.| .+|.++==+.+
T Consensus 263 ~G-~KMSKs~---Gn~V~~~dlle~~g~D~lRy~lls 295 (315)
T d1li5a2 263 DR-EKMSKSL---GNFFTVRDVLKYYDAETVRYFLMS 295 (315)
T ss_dssp TT-BCCCGGG---TCCCBHHHHHTTSCHHHHHHHHHS
T ss_pred CC-cEecCcC---CCcccHHHHHHhCCHHHHHHHHHc
Confidence 66 5999997 68998776 67777666554
No 23
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Probab=62.03 E-value=0.68 Score=41.90 Aligned_cols=15 Identities=33% Similarity=0.381 Sum_probs=12.1
Q ss_pred CCCCccccCCCCCCceeec
Q 015509 265 DGLSKMSKSAPSDQSRINL 283 (405)
Q Consensus 265 dg~~KMSKS~p~~~s~I~L 283 (405)
+| +|||||. +|.|.+
T Consensus 306 ~G-~KMSKSl---GN~I~~ 320 (361)
T d1rqga2 306 EG-KKFSTSR---NWAIWV 320 (361)
T ss_dssp TT-EECBTTT---TBSCBH
T ss_pred CC-EecCCCC---CCCCCH
Confidence 56 7999997 688865
No 24
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=58.85 E-value=0.98 Score=40.95 Aligned_cols=15 Identities=47% Similarity=0.563 Sum_probs=12.0
Q ss_pred CCCCccccCCCCCCceeec
Q 015509 265 DGLSKMSKSAPSDQSRINL 283 (405)
Q Consensus 265 dg~~KMSKS~p~~~s~I~L 283 (405)
+| +|||||. +|.|.+
T Consensus 291 ~G-~KMSKS~---GN~i~~ 305 (350)
T d1pfva2 291 NG-AKMSKSR---GTFIKA 305 (350)
T ss_dssp TT-BSCCTTT---TCCCBH
T ss_pred CC-eEccCcC---CCCCCH
Confidence 67 6999997 678865
No 25
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.43 E-value=4.9 Score=36.81 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=16.1
Q ss_pred EEeeCCCCcchhhhHHHHH
Q 015509 82 VSGVQPTGSIHLGNYLGAI 100 (405)
Q Consensus 82 ~sGi~PTG~lHLGnylg~i 100 (405)
|+.-=|||+||+||.-+++
T Consensus 14 ~~SaNpt~plHvGH~R~ai 32 (348)
T d1f7ua2 14 FSSPNIAKPFHAGHLRSTI 32 (348)
T ss_dssp CCCCBTTSCCBGGGHHHHH
T ss_pred ecCCCCCCCcchhhhhhHH
Confidence 5777899999999988754
No 26
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=54.46 E-value=2.4 Score=39.57 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=14.6
Q ss_pred ccccCCCCCCccccCCCCCCceeec
Q 015509 259 RVMSLTDGLSKMSKSAPSDQSRINL 283 (405)
Q Consensus 259 ~l~sL~dg~~KMSKS~p~~~s~I~L 283 (405)
.+..+ +| +|||||. +|.|.+
T Consensus 394 ~iL~~-~G-~KMSKS~---gn~I~~ 413 (452)
T d1ilea3 394 LILDE-KG-QKMSKSK---GNVVDP 413 (452)
T ss_dssp CEECT-TS-SCCCTTT---TCCCCH
T ss_pred EEECC-CC-cccCCCC---CCCcCH
Confidence 55555 67 6999997 678854
No 27
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=54.29 E-value=2.6 Score=40.00 Aligned_cols=57 Identities=30% Similarity=0.321 Sum_probs=32.5
Q ss_pred cccceeccccchHH---HHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCC
Q 015509 201 YQSDFVPVGEDQKQ---HLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSD 277 (405)
Q Consensus 201 ~~adlVpvG~DQ~~---hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~ 277 (405)
+-+|+...|.||.. |.++..-++- .| ...+..++.. .++... +| +|||||.
T Consensus 353 ~P~d~~~~G~Di~r~w~~~~~~~~~~~-----~~--------------~~Pfk~v~~h--G~vld~-~G-~KMSKS~--- 406 (450)
T d1ffya3 353 FPADMYLEGSDQYRGWFNSSITTSVAT-----RG--------------VSPYKFLLSH--GFVMDG-EG-KKMSKSL--- 406 (450)
T ss_dssp SSBSEEEEEGGGGTTHHHHHHHHHHHH-----HS--------------SCSBSEEEEE--CCEECT-TS-CCCCSSS---
T ss_pred CCCcccccCcchhhHHHHHHHHHHHHh-----cC--------------CCCcceEEEc--ceEECC-CC-CCCCCCC---
Confidence 44789999999963 3333333321 22 1223333332 255554 67 6999997
Q ss_pred Cceeec
Q 015509 278 QSRINL 283 (405)
Q Consensus 278 ~s~I~L 283 (405)
+|.|..
T Consensus 407 GN~I~p 412 (450)
T d1ffya3 407 GNVIVP 412 (450)
T ss_dssp SCCCCH
T ss_pred CCCcCH
Confidence 678854
No 28
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=53.90 E-value=1 Score=42.05 Aligned_cols=67 Identities=16% Similarity=0.127 Sum_probs=38.5
Q ss_pred eeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCCCcccccCCCCCCccccCCCCCCceeecC
Q 015509 205 FVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLL 284 (405)
Q Consensus 205 lVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~ 284 (405)
+--+|.+|..|+.+...+++.+++.-- -..-.++.. .++. + +| +||||.. ++.|.|.
T Consensus 254 iyVvd~~Q~~h~~~v~~~~~~~g~~~~--------------~~~~~hv~~---g~v~-~-~g-~kMStR~---G~~v~l~ 310 (370)
T d1iq0a2 254 INVVDVRQSHPQALVRAALALAGYPAL--------------AEKAHHLAY---ETVL-L-EG-RQMSGRK---GLAVSVD 310 (370)
T ss_dssp EEEEESSSCCCHHHHHHHHHHTTCHHH--------------HTTEEEEEE---CCEE-E-TT-BCSCC-------CCBHH
T ss_pred HHHHhccchHHHHHHHHHHHHhCCCch--------------hhceeeEEE---EEEe-c-CC-ccccccC---CCeeEHH
Confidence 447899999999999999998763100 011111111 1333 3 55 6999996 6899987
Q ss_pred CCHHHHHHHh
Q 015509 285 DPKDVIANKI 294 (405)
Q Consensus 285 Dspe~I~kKI 294 (405)
|==++..++.
T Consensus 311 dll~ea~~~a 320 (370)
T d1iq0a2 311 EVLEEATRRA 320 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6444444333
No 29
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Probab=50.48 E-value=2.4 Score=38.03 Aligned_cols=13 Identities=38% Similarity=0.721 Sum_probs=10.3
Q ss_pred CCCCcchhhhHHH
Q 015509 86 QPTGSIHLGNYLG 98 (405)
Q Consensus 86 ~PTG~lHLGnylg 98 (405)
-|||.+||||..+
T Consensus 12 ~p~G~lHiGH~~~ 24 (361)
T d1rqga2 12 YANGPIHAGHLAG 24 (361)
T ss_dssp BTTSCCBHHHHHH
T ss_pred CCCCCcccccccc
Confidence 3679999999654
No 30
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.45 E-value=4.7 Score=36.94 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=50.3
Q ss_pred hhhhhhHHHhhhhhcc-------ccc--eeccccchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCccccCCC
Q 015509 186 ALLTYPVLMASDILLY-------QSD--FVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPA 256 (405)
Q Consensus 186 g~l~YPvLQAADIl~~-------~ad--lVpvG~DQ~~hleLtRdia~r~n~~~g~~~~~~~g~~~~~~f~~P~~l~~~~ 256 (405)
|..+| -+.||-+. ++| +-.+|.||..|+.-...+++.++. ...+-+..
T Consensus 208 G~~tY---~t~DiAy~~~K~~~~~~D~~I~V~g~dq~~~~~~l~~~l~~lg~------------------~~~~~~~h-- 264 (348)
T d1f7ua2 208 GTTLY---LTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGF------------------EWAKDLQH-- 264 (348)
T ss_dssp SCCCH---HHHHHHHHHHHHHHHCCSEEEEECCGGGHHHHHHHHHHHHHTTC------------------GGGGGEEE--
T ss_pred Cccce---ecchHHhhhhhhhccCCCEEEEecccccchhhhhHHHHHHHhCC------------------Ccccceee--
Confidence 45555 35577442 345 558999999999998888888752 22221211
Q ss_pred CcccccCCCCCCccccCCCCCCceeecCCCHHHHHHHhhc
Q 015509 257 GARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKR 296 (405)
Q Consensus 257 ~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~kKI~k 296 (405)
.--|+ ..||||.. ++.|.|.|==+++.++++.
T Consensus 265 --~~~g~---v~kMStR~---G~~i~l~dll~e~~~~a~~ 296 (348)
T d1f7ua2 265 --VNFGM---VQGMSTRK---GTVVFLDNILEETKEKMHE 296 (348)
T ss_dssp --ECCCC---EESCCGGG---TCCCBHHHHHHHHHHHHHH
T ss_pred --ecCCc---cccccccC---CCceEHHHHHHHHHHHHHH
Confidence 11122 25999996 6899987766666655543
No 31
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]}
Probab=38.74 E-value=5 Score=37.68 Aligned_cols=27 Identities=11% Similarity=-0.077 Sum_probs=19.7
Q ss_pred ccceeccccchHHHHHHHHHHHHHHhh
Q 015509 202 QSDFVPVGEDQKQHLELTRELAERVNY 228 (405)
Q Consensus 202 ~adlVpvG~DQ~~hleLtRdia~r~n~ 228 (405)
.+|.++.|.++.......+.+...+..
T Consensus 339 ~vd~~~~~~~~~~~~~~~~~~~~~~~~ 365 (494)
T d1h3na3 339 PVDQYIGGVEHAVLHLLYSRFFTKFLH 365 (494)
T ss_dssp SBSEEECCGGGTTTHHHHHHHHHHHHH
T ss_pred Cceecccccceeeeeeecccchhhhhh
Confidence 368888998888877777776655443
No 32
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=32.37 E-value=4.7 Score=37.27 Aligned_cols=19 Identities=21% Similarity=0.461 Sum_probs=16.5
Q ss_pred EEeeCCCCcchhhhHHHHH
Q 015509 82 VSGVQPTGSIHLGNYLGAI 100 (405)
Q Consensus 82 ~sGi~PTG~lHLGnylg~i 100 (405)
|+.-=|||.||+||.-+++
T Consensus 13 f~SpN~~kplHvGHlRs~i 31 (370)
T d1iq0a2 13 HTSVNPNKELHVGHLRNIA 31 (370)
T ss_dssp CCCCCTTSCCBHHHHHHHH
T ss_pred ecCCCCCCCcchhhhhhHH
Confidence 6888999999999988754
No 33
>d2ga1a1 a.4.1.16 (A:1-102) Hypothetical protein Ava_0674 (Alr1493 orthologue) {Anabaena variabilis [TaxId: 1172]}
Probab=20.78 E-value=43 Score=25.26 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=29.4
Q ss_pred CCCccchHHHHHHhhCCCCHHHHHHHHhcCCcchHHHHHHHH
Q 015509 311 ERPECNNLLSIYQLISGKTKGEVAEECQNMNWGTFKPLLTDA 352 (405)
Q Consensus 311 ~rpev~nll~i~~~~t~~~~eel~~~y~~~~~gdlK~~Lae~ 352 (405)
.|..|..++.++. .+.+.+||.++|-.+...++..+++-+
T Consensus 49 TRI~V~~Il~~l~--~G~s~eeIl~~yP~Lt~edI~aAL~Ya 88 (102)
T d2ga1a1 49 TRIPVWTLVAYRQ--QGAPDKELLANYPGLTAEDLSAAWHYY 88 (102)
T ss_dssp SCCBHHHHHHHHH--TTCCHHHHHHHSTTCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHHH--cCCCHHHHHHHCCCCCHHHHHHHHHHH
Confidence 3444555555443 789999999999999998887777654
No 34
>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.02 E-value=1.2e+02 Score=24.61 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=43.0
Q ss_pred HHHHhcCCcchHHHHHHHHHHHHhhH-----------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHc
Q 015509 334 AEECQNMNWGTFKPLLTDALIEHLHP-----------IQVRYEEIMSDSAYLDKVLADGAAKAADIADATLNNV--YQAM 400 (405)
Q Consensus 334 ~~~y~~~~~gdlK~~Lae~i~~~L~p-----------irer~~e~~~~~~~l~~iL~~Ga~kAr~iA~~tl~~V--r~a~ 400 (405)
.+.|+.....++|+...+--..+|.| ++...+..+.+.+...+++.+.-+++...-+..+.+- ++-|
T Consensus 41 ~e~yk~~~~k~~~~~a~~Iy~~FL~~~Ap~~Vnid~~i~~~i~~~L~~ee~~~~~F~~aQ~~v~~~i~~~l~dFr~KR~m 120 (182)
T d1htjf_ 41 AEVYQQASPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDSRLRNSEDARGVLCEAQEAAMPEIQEQIHDYRTKRTL 120 (182)
T ss_dssp HHHHTTSCTTHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCHHHHHHHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45555666677777666666667666 4555454444444456777777777777766666654 5566
Q ss_pred CC
Q 015509 401 GF 402 (405)
Q Consensus 401 Gl 402 (405)
|+
T Consensus 121 gl 122 (182)
T d1htjf_ 121 GL 122 (182)
T ss_dssp TC
T ss_pred cC
Confidence 75
Done!