Your job contains 1 sequence.
>015510
MSGSHADSTQSQDVNSANVTPDIPIEIVSEEEMALIDAALAAPRCCSPSSSLSFASQLQR
NARFIHSISFLSKRSFSGRTESDIEDLGHLGMTQKRNIIAKSLLDRFRKNRALSVTDVTD
TEWCEKKMEFNLLFGSKKVNKVMKVGRARHAELEKEVTEKVKVRVRSTEDIWAVKLFNSI
TGVNQLLFEGLTRELPILGFIKGVWMVGVIDEIQMPVKETARNPILVDTKTRAQYTLPAE
SQKRNGRLQLMCYKYMWDNLAADNFPSMQFYDFFSLNSDCILSEEIIEKTSNAGFPAKTL
GDLVKYFRNMWNMLPASHNQLLLRYEFQKDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGE
REASFTPLEDRWKCRYCQFESVCPAVLKPEITPIPSQTDCNNTPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015510
(405 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175093 - symbol:AT5G60370 "AT5G60370" species... 895 1.1e-89 1
UNIPROTKB|A2VDX7 - symbol:EXO5 "Exonuclease V" species:99... 353 2.9e-32 1
RGD|1309802 - symbol:Exo5 "exonuclease 5" species:10116 "... 347 1.3e-31 1
MGI|MGI:1920422 - symbol:Exo5 "exonuclease 5" species:100... 336 1.8e-30 1
UNIPROTKB|Q9H790 - symbol:EXO5 "Exonuclease V" species:96... 319 1.2e-28 1
ZFIN|ZDB-GENE-051113-108 - symbol:zgc:123272 "zgc:123272"... 317 1.9e-28 1
POMBASE|SPBC685.02 - symbol:exo5 "mitochondrial single st... 191 4.6e-20 2
UNIPROTKB|G4ND20 - symbol:MGG_00297 "Uncharacterized prot... 174 7.6e-18 2
CGD|CAL0001175 - symbol:DEM1 species:5476 "Candida albica... 131 5.8e-07 2
>TAIR|locus:2175093 [details] [associations]
symbol:AT5G60370 "AT5G60370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB011483 EMBL:AY072102
EMBL:AY142558 EMBL:AK175444 EMBL:AK176898 IPI:IPI00540309
RefSeq:NP_200845.1 UniGene:At.29164 PRIDE:Q9FKK6
EnsemblPlants:AT5G60370.1 GeneID:836159 KEGG:ath:AT5G60370
TAIR:At5g60370 InParanoid:Q9FKK6 OMA:IFDAMVQ PhylomeDB:Q9FKK6
ProtClustDB:CLSN2686678 Genevestigator:Q9FKK6 InterPro:IPR019190
Pfam:PF09810 Uniprot:Q9FKK6
Length = 413
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 181/371 (48%), Positives = 240/371 (64%)
Query: 19 VTPDIPIEIVSEEEMALIDXXXXXXXX---XXXXXXXXXXXXXXXNARFIHSISFLSKRS 75
V P+IPIEIVSEEEMA++D + + I SI+ SKR
Sbjct: 38 VFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAGGSPKTIRSITLFSKRK 97
Query: 76 FSGRTESDIEDLGHLGMTQKRNIIAKSLLDRFRKNRALSVTDVTDTEWCEKKMEFNLLFG 135
S SDIE+ S L RFR+N+AL VTD+T TEWCEK+ME L FG
Sbjct: 98 LSAC--SDIEE---------------SYLHRFRRNQALGVTDLTGTEWCEKQMENVLCFG 140
Query: 136 SKKVNKVMKVGRARHAELXXXXXXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTREL 195
+KVNK MKVG+ARH +L +V S ED WA+KL NSI GVNQ LFEG TREL
Sbjct: 141 RRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLNSIAGVNQFLFEGRTREL 200
Query: 196 PILGFIKGVWMVGVIDEIQMPVKETARN--PILVDTKTRAQYTLPAESQKRNGRLQLMCY 253
+LGF+ G W+VG+IDE++ E + + PIL+DTKTR + TLPAE Q+RNGRLQLM Y
Sbjct: 201 LLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDTLPAEPQRRNGRLQLMLY 260
Query: 254 KYMWDNLAADNFPSMQFYDFFSLNSDCILSEEIIEKTSNAGFPAKTLGDLVKYFRNMWNM 313
K +WD + + FP+ F+D+FSLN + +LS+++ + +NAG A+TL ++V+Y+ N + M
Sbjct: 261 KLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIKAQTLEEIVRYYENTFQM 320
Query: 314 LPASHNQLLLRYEFQKDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWK 373
LP ++NQLLL+YEFQKDQS++ E +F D++ S+ +EFW+ EREA +TP E+RWK
Sbjct: 321 LPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEFWRNEREAGYTPEEERWK 380
Query: 374 CRYCQFESVCP 384
CRYCQF CP
Sbjct: 381 CRYCQFAKSCP 391
>UNIPROTKB|A2VDX7 [details] [associations]
symbol:EXO5 "Exonuclease V" species:9913 "Bos taurus"
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=ISS] [GO:0036297
"interstrand cross-link repair" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
GO:GO:0003677 GO:GO:0004527 GO:GO:0090305 InterPro:IPR019190
Pfam:PF09810 EMBL:DAAA02009128 EMBL:BC133457 IPI:IPI00715582
RefSeq:NP_001075077.1 UniGene:Bt.6374 PRIDE:A2VDX7
Ensembl:ENSBTAT00000000690 GeneID:538883 KEGG:bta:538883
CTD:100406480 eggNOG:NOG331822 HOVERGEN:HBG095898 InParanoid:A2VDX7
OrthoDB:EOG402WSD NextBio:20877642 Uniprot:A2VDX7
Length = 370
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 84/295 (28%), Positives = 143/295 (48%)
Query: 95 KRNIIAKSLLDRFRKNRALSVTDVTDTEWCEKKMEFNLLFG---SKKVNKVMKVGRARHA 151
KR + S ++RF + L VTD++ WCE++M + F + + + ++ G + H
Sbjct: 61 KRRLDVSSPMERFHL-KYLYVTDLSTQNWCEQQMVYGKEFSGFLTPEKSAILDTGASIHL 119
Query: 152 ELXXXXXXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVID 211
+ S ED WAVK N ++ + L EG RE P+ ++GV +VGVID
Sbjct: 120 ARELEVHDLVSIPITSKEDAWAVKFLNILSMIPTLQSEGRIREFPVFAEVEGVLLVGVID 179
Query: 212 EIQMPVKETARNPI-LVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQF 270
E+ TA + L + KTR LP+++QK+ Q+ YKY++D + +
Sbjct: 180 ELHY----TASGELELTELKTRGNPVLPSDAQKKKDYFQVSLYKYIFDAMVQGKVTAASL 235
Query: 271 YDFFSLNSDCILSEEIIEKTSNAGFPAKTLGDLVKY-FRNMW-NMLPASHNQLLLRYEFQ 328
L+ + L ++ G+ K+LGDL++ F ++ + LP + L + Y Q
Sbjct: 236 IHHTKLDPEKPLGPSVLRHAQQGGYSVKSLGDLIELVFLSLTLSDLPLI-DSLKIEYVHQ 294
Query: 329 KDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESVC 383
++LG E AF S+++ + +W G RE +E+ WKCR C + +C
Sbjct: 295 GTATVLGTEMVAFAEKEVRSKVQHYMTYWMGHREPQGVDVEEAWKCRMCNYADIC 349
>RGD|1309802 [details] [associations]
symbol:Exo5 "exonuclease 5" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0036297 "interstrand cross-link repair"
evidence=ISO] [GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=ISO] RGD:1309802 EMBL:CH473968
OMA:IFDAMVQ InterPro:IPR019190 Pfam:PF09810 OrthoDB:EOG402WSD
GeneTree:ENSGT00390000015205 CTD:64789 IPI:IPI00778850
RefSeq:NP_001101443.1 UniGene:Rn.35470 Ensembl:ENSRNOT00000056644
GeneID:313563 KEGG:rno:313563 UCSC:RGD:1309802 NextBio:666434
Uniprot:D3ZLE0
Length = 373
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 90/294 (30%), Positives = 139/294 (47%)
Query: 95 KRNIIAKSLLDRFRKNRALSVTDVTDTEWCEKKMEFNL-LFGSKKVNK--VMKVGRARHA 151
KR + S +DRF + L VTD+ +WCE +M + L GS K V+ +G + H
Sbjct: 64 KRGLDVLSPMDRFHL-KYLYVTDLCTQDWCELQMVYGKELPGSLTPEKAAVLDIGASIHL 122
Query: 152 ELXXXXXXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVID 211
+ ED WAVK N ++ V L EG RE P+ G ++G+++VGVID
Sbjct: 123 AKELELHDLVTVPTTTKEDAWAVKFLNILSMVPTLQSEGRIREFPVFGEVEGIFLVGVID 182
Query: 212 EIQMPVKETARNPILVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQFY 271
E+ K L + KTR + LP +QK+ Q+ YKY++D +
Sbjct: 183 ELHYTSKGELE---LAELKTRRRPVLPLSAQKKKDYFQVSLYKYIFDAMVQGKVTPASLI 239
Query: 272 DFFSLNSDCILSEEIIEKTSNAGFPAKTLGDLVKY-FRNMW-NMLPASHNQLLLRYEFQK 329
L D L ++ G K+LGDL++ F ++ + LPA + L L Y Q+
Sbjct: 240 HHTKLCVDKPLGPSVLRHARQGGVSVKSLGDLMELVFLSLTLSDLPAI-DTLKLEYVHQE 298
Query: 330 DQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESVC 383
+ LG E AF+ S++ + +W G R+ +E+ WKCR C + +C
Sbjct: 299 TATTLGTEIVAFEEKEVKSKVRHFVAYWMGRRDPQGVDVEEAWKCRTCDYVDIC 352
>MGI|MGI:1920422 [details] [associations]
symbol:Exo5 "exonuclease 5" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0036297 "interstrand cross-link repair"
evidence=ISO] [GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=ISO] MGI:MGI:1920422 GO:GO:0003677
GO:GO:0004527 GO:GO:0090305 OMA:IFDAMVQ InterPro:IPR019190
Pfam:PF09810 eggNOG:NOG331822 HOVERGEN:HBG095898 OrthoDB:EOG402WSD
GeneTree:ENSGT00390000015205 CTD:64789 EMBL:AK014134 EMBL:AL606904
EMBL:BC023360 IPI:IPI00110584 RefSeq:NP_001153515.1
RefSeq:NP_082733.1 UniGene:Mm.151436 ProteinModelPortal:Q9CXP9
PhosphoSite:Q9CXP9 PRIDE:Q9CXP9 Ensembl:ENSMUST00000030375
Ensembl:ENSMUST00000144114 Ensembl:ENSMUST00000156836
Ensembl:ENSMUST00000177880 GeneID:73172 KEGG:mmu:73172
UCSC:uc008unt.1 InParanoid:Q9CXP9 NextBio:337601 Bgee:Q9CXP9
Genevestigator:Q9CXP9 Uniprot:Q9CXP9
Length = 373
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 86/287 (29%), Positives = 136/287 (47%)
Query: 102 SLLDRFRKNRALSVTDVTDTEWCEKKMEFNL-LFGSKKVNK--VMKVGRARHAELXXXXX 158
S ++RF + L VTD+ WCE +M + L GS K V+ G + H
Sbjct: 71 SPMERFHL-KYLYVTDLCTQNWCELQMVYGKELPGSLTPEKAAVLDTGASIHLAKELELH 129
Query: 159 XXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVIDEIQMPVK 218
+ + ED WAVK N + + L EG RE P+ G ++G+++VGVIDE+ K
Sbjct: 130 DLVTVPIATKEDAWAVKFLNILAMIPALQSEGRVREFPVFGEVEGIFLVGVIDELHYTSK 189
Query: 219 ETARNPILVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQFYDFFSLNS 278
L + KTR + LP +QK+ Q+ YKY++D + L
Sbjct: 190 GELE---LAELKTRRRPVLPLPAQKKKDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCL 246
Query: 279 DCILSEEIIEKTSNAGFPAKTLGDLVKY-FRNMW-NMLPASHNQLLLRYEFQKDQSLLGE 336
D L ++ G K+LGDL++ F ++ + LPA + L L Y Q+ ++LG
Sbjct: 247 DKPLGPSVLRHARQGGVSVKSLGDLMELVFLSLTLSDLPAI-DTLKLEYIHQETATILGT 305
Query: 337 EKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESVC 383
E AF+ S+++ + +W G R+ +E+ WKCR C + +C
Sbjct: 306 EIVAFEEKEVKSKVQHYVAYWMGHRDPQGVDVEEAWKCRTCDYVDIC 352
>UNIPROTKB|Q9H790 [details] [associations]
symbol:EXO5 "Exonuclease V" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045145 "single-stranded DNA specific
5'-3' exodeoxyribonuclease activity" evidence=IDA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=TAS] [GO:0042803 "protein homodimerization activity"
evidence=TAS] [GO:0036297 "interstrand cross-link repair"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] GO:GO:0003677 EMBL:CH471059 GO:GO:0004527
GO:GO:0090305 OMA:IFDAMVQ InterPro:IPR019190 Pfam:PF09810
eggNOG:NOG331822 HOVERGEN:HBG095898 OrthoDB:EOG402WSD EMBL:AK024797
EMBL:AL603839 EMBL:BC021969 IPI:IPI00291022 RefSeq:NP_073611.1
UniGene:Hs.59584 ProteinModelPortal:Q9H790 PhosphoSite:Q9H790
DMDM:74752706 PaxDb:Q9H790 PRIDE:Q9H790 DNASU:64789
Ensembl:ENST00000296380 Ensembl:ENST00000358527
Ensembl:ENST00000372703 Ensembl:ENST00000415550
Ensembl:ENST00000418186 Ensembl:ENST00000419161
Ensembl:ENST00000420209 Ensembl:ENST00000432259
Ensembl:ENST00000443729 GeneID:64789 KEGG:hsa:64789 UCSC:uc001cfp.3
CTD:64789 GeneCards:GC01P040974 HGNC:HGNC:26115 HPA:HPA028429
neXtProt:NX_Q9H790 PharmGKB:PA164718736 InParanoid:Q9H790
PhylomeDB:Q9H790 GenomeRNAi:64789 NextBio:66850 Bgee:Q9H790
CleanEx:HS_DEM1 Genevestigator:Q9H790 Uniprot:Q9H790
Length = 373
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 87/295 (29%), Positives = 138/295 (46%)
Query: 95 KRNIIAKSLLDRFRKNRALSVTDVTDTEWCEKKMEFNL-LFGSKKVNK--VMKVGRARHA 151
KR + S ++RF + L VTD+ WCE + + L G K V+ G + H
Sbjct: 64 KRGLDILSPMERFHL-KYLYVTDLATQNWCELQTAYGKELPGFLAPEKAAVLDTGASIHL 122
Query: 152 ELXXXXXXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVID 211
V + ED WA+K N + + L EG RE P+ G +GV +VGVID
Sbjct: 123 ARELELHDLVTVPVTTKEDAWAIKFLNILLLIPTLQSEGHIREFPVFGEGEGVLLVGVID 182
Query: 212 EIQMPVKETARNPI-LVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQF 270
E+ TA+ + L + KTR + LP E+QK+ Q+ YKY++D +
Sbjct: 183 ELHY----TAKGELELAELKTRRRPMLPLEAQKKKDCFQVSLYKYIFDAMVQGKVTPASL 238
Query: 271 YDFFSLNSDCILSEEIIEKTSNAGFPAKTLGDLVKY-FRNMW-NMLPASHNQLLLRYEFQ 328
L + L ++ GF K+LGDL++ F ++ + LP + L + Y Q
Sbjct: 239 IHHTKLCLEKPLGPSVLRHAQQGGFSVKSLGDLMELVFLSLTLSDLPVI-DILKIEYIHQ 297
Query: 329 KDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESVC 383
+ ++LG E AF ++++ + +W G RE +E+ WKCR C + +C
Sbjct: 298 ETATVLGTEIVAFKEKEVRAKVQHYMAYWMGHREPQGVDVEEAWKCRTCTYADIC 352
>ZFIN|ZDB-GENE-051113-108 [details] [associations]
symbol:zgc:123272 "zgc:123272" species:7955 "Danio
rerio" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0036297
"interstrand cross-link repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045145 "single-stranded DNA specific 5'-3'
exodeoxyribonuclease activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] ZFIN:ZDB-GENE-051113-108
InterPro:IPR019190 Pfam:PF09810 EMBL:BX908796 IPI:IPI00852097
Ensembl:ENSDART00000129154 GeneTree:ENSGT00390000015205 Bgee:F1Q514
Uniprot:F1Q514
Length = 394
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 86/288 (29%), Positives = 133/288 (46%)
Query: 102 SLLDRFRKNRALSVTDVTDTEWCEKKMEFNLL---FGSKKVNKV-MKVGRARHAELXXXX 157
S + RFRK LSVT + D WCE K +NLL K++ + +++G+ H
Sbjct: 91 SPMQRFRKQH-LSVTLLCDQTWCEMKSVYNLLKPHIKRKEMQRTEVQIGQEIHLSRELEI 149
Query: 158 XXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVIDEIQMPV 217
+R+ ED AVKL N + + L RE P+ G +GV+++GVIDE+
Sbjct: 150 QDVVPVDIRTREDGEAVKLLNMLHMIPLLEAGQRVREFPVFGVQEGVFIMGVIDELMYNQ 209
Query: 218 KETARNPILVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQFYDFFSLN 277
K +L + KTR Q +LP+ +Q + Q+ YK ++D L +D L
Sbjct: 210 KGEL---VLNELKTRRQNSLPSSAQDKVNCFQVGLYKLLFDGLVRGEMKKNHIFDHLKLR 266
Query: 278 SDCILSEEIIEKTSNAGFPAKTLGDLVK--YFRNMWNMLPASHNQLLLRYEFQKDQSLLG 335
S IL + N G A+T +LV+ + LP + L + Y Q +G
Sbjct: 267 SAQILGAGVQAHAKNLGVHARTFEELVETLLITVSCSDLPCI-DLLQIEYFHQGSNGPIG 325
Query: 336 EEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESVC 383
FD +++ L +W G+RE +E+ WKCR C +E +C
Sbjct: 326 TRVAPFDEAQIRGELQAYLSYWTGQREPKGVDIEEAWKCRSCLYEEIC 373
>POMBASE|SPBC685.02 [details] [associations]
symbol:exo5 "mitochondrial single stranded DNA specific
5'-3' exodeoxyribonuclease Exo5 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000002 "mitochondrial genome
maintenance" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0045145
"single-stranded DNA specific 5'-3' exodeoxyribonuclease activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
PomBase:SPBC685.02 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0003677 EMBL:CU329671 GO:GO:0000002 GO:GO:0045145
InterPro:IPR019190 Pfam:PF09810 eggNOG:NOG331822 PIR:T40633
RefSeq:NP_596136.1 EnsemblFungi:SPBC685.02.1 GeneID:2541105
KEGG:spo:SPBC685.02 OMA:AVNELEM OrthoDB:EOG40P7HN NextBio:20802218
Uniprot:Q9Y7L4
Length = 409
Score = 191 (72.3 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 62/185 (33%), Positives = 87/185 (47%)
Query: 102 SLLDRFRKNRA-LSVTDVTDTEWCEKKMEFNLLFGSKKVNKVMKVGRARHAELXXXXXXX 160
SL FRK++ L+VTD+ WCE + E+ LL KK M+ G H L
Sbjct: 63 SLFQLFRKHKGYLNVTDLVLPLWCEVQHEYYLLRRIKKKTPKMERGIKLHQILEYETSPP 122
Query: 161 XXXRV---RSTEDIWAVKLFNSITGVNQLLFEGLTRELPILGFIKGVWMVGVIDEIQM-- 215
RV S E+ WA++L + G+ L G+TRE PI G+ K + G+IDEI +
Sbjct: 123 SERRVLDRTSKEEPWALRLLRQLEGIMLLQKNGITREFPIWGYYKESSIFGIIDEISLNN 182
Query: 216 PVKETARNPI------------LVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAAD 263
P K + I VD KTR P SQ + ++QLM Y +++ N
Sbjct: 183 PSKSNFNSDIRNYFNFKMYDLSFVDNKTRFSSRKPGASQILSSKVQLMYYVHLFLNY--- 239
Query: 264 NFPSM 268
FPS+
Sbjct: 240 -FPSL 243
Score = 112 (44.5 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 314 LPASHNQLLLRYEFQKDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWK 373
L + + L + Y K ++ ++KF+F L + +FW RE P E+ +K
Sbjct: 326 LRLTDDNLTIAYRNDKTGEVVYKDKFSFSNKLLEASYTKAYQFWHNLREPEGVPAEEVYK 385
Query: 374 CRYCQFESVCPAVLKPEITPIPS 396
CR C+F+ C + K + P+ S
Sbjct: 386 CRSCEFQKECWWLKKKQYYPLSS 408
>UNIPROTKB|G4ND20 [details] [associations]
symbol:MGG_00297 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM001235 InterPro:IPR019190 Pfam:PF09810 RefSeq:XP_003718794.1
EnsemblFungi:MGG_00297T0 GeneID:2674820 KEGG:mgr:MGG_00297
Uniprot:G4ND20
Length = 623
Score = 174 (66.3 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 83 DIEDLGHLGMTQKRNIIA-KSLLDRFRK--NRALSVTDVTDTEWCEKKMEFNL--LFGSK 137
DIEDL + + KS L RFR + LSVTD + WCE++ E+ L L G K
Sbjct: 172 DIEDLPQSSSSNNQAAQPLKSPLARFRTFPRKPLSVTDFSSLVWCEQQHEYTLTRLGGRK 231
Query: 138 KVNKVMKVGRARHAELXXXXXXXXXXRVRSTEDIWAVKLFNSITGVNQLLFEGLTRELPI 197
MK G H +L V + ED + +K++N I G+ L +GLTREL +
Sbjct: 232 PRTAAMKGGTKIHEQLEREVYRTVRVEVMTKEDAFGLKIWNIIQGLRTLRDDGLTRELEV 291
Query: 198 LGFIKGVWMVGVID--EIQMP 216
G + G + G+ID +Q P
Sbjct: 292 WGLVDGHVVNGLIDGLSVQHP 312
Score = 117 (46.2 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 261 AADNFPSMQFYDFFSLNSDCILSEEIIEKTSNAGFPAKTLGDLVKYFRNMWNMLPASHNQ 320
A + P+ + + SL L + +++T G +LG +V + LP +
Sbjct: 465 ARSSMPADERLRYRSLRQLIPLLKNELKQTFPRG--EASLGQVVS-IEYRYRGLPKRKKE 521
Query: 321 LL--LRYEFQKDQ---SLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCR 375
+ L E ++D +L+G F + S +E +E+W+GER A+ P+E+ KCR
Sbjct: 522 IDIDLSMEDEEDSDVGALIGHHNFNVADENLPSCLEDHMEWWRGERPANGVPVEEADKCR 581
Query: 376 YCQFESVC 383
YCQF +C
Sbjct: 582 YCQFADIC 589
Score = 76 (31.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 221 ARNPILVDTKTRAQYTLPAESQKRNGRLQLMCYKYMWDNLAADNFPSMQFYDFFSLNSDC 280
AR L D KTR ++LP++ R +QL Y ++AA + Y + L+ D
Sbjct: 356 ARKVWLFDVKTRGHWSLPSKVHLRPAMIQLYLYHRFLADMAAGRLDYLHVYRRYGLDPDL 415
Query: 281 ILSE 284
S+
Sbjct: 416 PFSD 419
>CGD|CAL0001175 [details] [associations]
symbol:DEM1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000002 "mitochondrial genome
maintenance" evidence=IEA] [GO:0045145 "single-stranded DNA
specific 5'-3' exodeoxyribonuclease activity" evidence=IEA]
CGD:CAL0001175 GO:GO:0005739 GO:GO:0003677 GO:GO:0004527
GO:GO:0090305 EMBL:AACQ01000091 EMBL:AACQ01000090
InterPro:IPR019190 Pfam:PF09810 RefSeq:XP_715117.1
RefSeq:XP_715168.1 GeneID:3643200 GeneID:3643259
KEGG:cal:CaO19.11870 KEGG:cal:CaO19.4392 eggNOG:NOG328932
Uniprot:Q59ZZ6
Length = 628
Score = 131 (51.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 323 LRYEFQKDQSLLGEEKFAFDYDLFNSQIEVCLEFWKGEREASFTPLEDRWKCRYCQFESV 382
+ Y + K LL E+ + +++ F +++E +FW GERE P ED +C YC+F+S
Sbjct: 537 VEYRYNKTSELLSEKVYDYNFSEFQAEVESASKFWNGEREV--IPTEDLSRCSYCEFQSK 594
Query: 383 C 383
C
Sbjct: 595 C 595
Score = 59 (25.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 113 LSVTDVTDTEWCEKKMEFNLLFGSKKV--NKVMKVGRARHAEL 153
LSVT + + WCE + + + GS ++ K M G H++L
Sbjct: 153 LSVTKLLVSSWCELRSFYQVYSGSVRLPSTKAMTQGTKLHSKL 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 405 372 0.00087 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 618 (66 KB)
Total size of DFA: 258 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.63u 0.12s 26.75t Elapsed: 00:00:02
Total cpu time: 26.63u 0.12s 26.75t Elapsed: 00:00:02
Start: Sat May 11 05:50:05 2013 End: Sat May 11 05:50:07 2013