BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015512
(405 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 120 RLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGT 178
++ ++ P + P P +V+ GG+W++G + R LA+ +V +DYR P+
Sbjct: 61 KVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISW 238
V+D + ++ AD+ DP RI + G SAG ++++ + KE G ++++
Sbjct: 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSI--LAKERGGPALAF 178
Query: 239 SASHIKYYFGLSGGYNLL--------NLVDHCHNRGL---YRSIFLSIMEGEESLPVFSP 287
+ S GY+ N + G+ +R +L+ +E E + P FSP
Sbjct: 179 -----QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLE-ELTHPWFSP 232
Query: 288 AVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPEL 338
+ D S L P I T+ Y D +A+AL K G K E+
Sbjct: 233 VL------YPDLSGLPPAYI---ATAQYDPLRDVGKLYAEALNKAGVKVEI 274
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 126 PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTISDMVK 184
P + P P +V+ GG W++G + R LA+ +V +DYR P+ V+
Sbjct: 67 PEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVE 126
Query: 185 DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIK 244
D + ++ AD+ DP RI + G SAG ++++ + KE G ++++ I
Sbjct: 127 DAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSI--LAKERGGPALAFQLL-IY 183
Query: 245 YYFGLSGGYNLLNLVDHCHNRGL-------YRSIFLSIMEGEESLPVFSPAVRIKDPSIR 297
G + ++ ++ L +R +L+ +E E + P FSP +
Sbjct: 184 PSTGYDPAHPPASIEENAEGYLLTGGXXLWFRDQYLNSLE-ELTHPWFSPVL------YP 236
Query: 298 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPEL 338
D S L P I T+ Y D +A+AL K G K E+
Sbjct: 237 DLSGLPPAYI---ATAQYDPLRDVGKLYAEALNKAGVKVEI 274
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 120 RLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGT 178
++ ++ P + P P +V+ GG W++G + R LA+ +V +DYR P+
Sbjct: 61 KVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA------------LLEQ 226
V+D + ++ AD+ DP RI + G SAG ++++ +
Sbjct: 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQL 180
Query: 227 AVKESTGESISWSASHIKYY---FGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLP 283
+ STG + + I+ + L+GG +L L +L+ +E E + P
Sbjct: 181 LIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFL-----------DQYLNSLE-ELTHP 228
Query: 284 VFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPEL 338
FSP + D S L P I T+ Y D +A+AL K G K E+
Sbjct: 229 WFSPVL------YPDLSGLPPAYI---ATAQYDPLRDVGKLYAEALNKAGVKVEI 274
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 103 FSSQVRRSVVYGDQPRNRLDLHFPTNNDGPK---PVVVFVTGGAWIIGYKAWGSLL---- 155
+ + + YGD+ L++ P PV++++ GGA+++G + L
Sbjct: 65 LQATITQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYL 124
Query: 156 --GRQLAER-DIIVACLDYRNFPQGTISDM---------VKDVSQGISFVFNNIADYGGD 203
G ++A R ++IV +YR P G +S ++D I++V NIA +GGD
Sbjct: 125 YDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGD 184
Query: 204 PNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSA 240
PN I L G+SAG S L K +IS S
Sbjct: 185 PNNITLFGESAGGASVSLQTLSPYNKGLIRRAISQSG 221
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 116 QPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNF 174
P ++ P N GP PV++++ GG + IG ++A E VA ++YR
Sbjct: 62 DPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA 121
Query: 175 PQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
P+ T V D + ++ + + G DP+RI + GQSAG +++ +L+
Sbjct: 122 PETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 116 QPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNF 174
P ++ P N GP PV++++ GG + IG ++A E VA ++YR
Sbjct: 62 DPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA 121
Query: 175 PQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
P+ T V D + ++ + + G DP+RI + GQSAG +++ +L+
Sbjct: 122 PETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 19/141 (13%)
Query: 103 FSSQVRRSVVYGDQPRNRLDLHFPTNNDGPK---PVVVFVTGGAWIIGYKAWGSLL---- 155
+ + + YGD+ L++ P PV++++ GGA+++G + L
Sbjct: 65 LQATITQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYL 124
Query: 156 --GRQLAER-DIIVACLDYRNFPQGTISDM---------VKDVSQGISFVFNNIADYGGD 203
G ++A R ++IV +YR P G +S ++D I++V NIA +GGD
Sbjct: 125 YDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGD 184
Query: 204 PNRIYLMGQSAGAHISSCALL 224
P+ I L G+SAG S L
Sbjct: 185 PDNITLFGESAGGASVSLQTL 205
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 28/146 (19%)
Query: 121 LDLHFPTNND-----GPKPVVVFVTGGAWIIGYKAWGSLL-GRQLAER-DIIVACLDYRN 173
L+++ PT +D GPKPV+V++ GG+++ G G+L G LA ++IV ++YR
Sbjct: 114 LNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGT---GNLYDGSVLASYGNVIVITVNYRL 170
Query: 174 FPQGTISDMVK---------DVSQGISFVFNNIADYGGDPNRIYLMGQSAG--------- 215
G +S + D+ Q + + NI +GGDP RI + G AG
Sbjct: 171 GVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 230
Query: 216 AHISSCALLEQAVKESTGESISWSAS 241
+H S L ++A+ +S SW+ S
Sbjct: 231 SHYSEKGLFQRAIAQSGTALSSWAVS 256
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 129 NDGPKPVVVFVTGGAWIIGYKAW--GSLLGRQLAERDIIVACLDYRNFPQGTISDMVK-- 184
+ G KPV++F+ GG+++ G GS+L A ++IV L+YR G +S +
Sbjct: 134 DSGKKPVMLFLHGGSYMEGTGNMFDGSVLA---AYGNVIVVTLNYRLGVLGFLSTGDQAA 190
Query: 185 -------DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHI--------SSCALLEQAVK 229
D Q + ++ NIA +GGDP RI + G AGA S L ++A+
Sbjct: 191 KGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIA 250
Query: 230 ESTGESISWSASH--IKY 245
+S SWS ++ +KY
Sbjct: 251 QSGTAISSWSVNYQPLKY 268
>pdb|4E11|A Chain A, Crystal Structure Of Kynurenine Formamidase From
Drosophila Melanogaster
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 33/245 (13%)
Query: 113 YGDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDIIVACLDYR 172
YG + R +D+ + P+ VFV GG W + + L R VA +DY
Sbjct: 63 YG-EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYN 121
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYG--GDPNRIYLMGQSAGAHISSCALLEQAVKE 230
PQ T+ ++ + ++++F DY + + G SAGAH+ + L+ V
Sbjct: 122 LCPQVTLEQLMTQFTHFLNWIF----DYTEMTKVSSLTFAGHSAGAHLLAQILMRPNVIT 177
Query: 231 STGESISWSASHIKYYFGLSGGYNLLNL-----VDHCHNRGLYRSIFLSIMEGEESLPVF 285
+ + W+ L G Y+L L V+ + GL E ++
Sbjct: 178 AQRSKMVWAL------IFLCGVYDLRELSNLESVNPKNILGL----------NERNIESV 221
Query: 286 SPAV-RIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGK 344
SP + D ++ +++ I + D + + S +AD L+K G K L+ G
Sbjct: 222 SPMLWEYTDVTVWNSTK----IYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGY 277
Query: 345 SHTDL 349
H D+
Sbjct: 278 DHFDI 282
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 127 TNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDI------IVACLDYRNFP----- 175
T D PV+V++ GGA++ G A + G + I + ++YR P
Sbjct: 116 TKPDAKLPVMVWIYGGAFVYGSSA--AYPGNSYVKESINMGQPVVFVSINYRTGPFGFLG 173
Query: 176 ------QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA 216
+G + + D +G+ +V +NIA++GGDP+++ + G+SAGA
Sbjct: 174 GDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGA 220
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLL------GRQLAER-DIIVACLDYRNFPQGTISDM---- 182
PV++++ GGA+++G + L G ++A R ++IV +YR P G +S
Sbjct: 99 PVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158
Query: 183 -----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESIS 237
+ D I++V NI +GGDP++I L G+SAG S L K +IS
Sbjct: 159 PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAIS 218
Query: 238 WSA 240
S
Sbjct: 219 QSG 221
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
Query: 121 LDLHFPTNND-----GPKPVVVFVTGGAWIIGYKAWGSLL-GRQLAER-DIIVACLDYRN 173
L+++ PT +D GPKPV+V++ GG+++ G G+L G LA ++IV ++YR
Sbjct: 127 LNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGT---GNLYDGSVLASYGNVIVITVNYRL 183
Query: 174 FPQGTISDMVK---------DVSQGISFVFNNIADYGGDPNRIYLMGQSAG--------- 215
G +S + D+ Q + + NI +GGDP RI + G AG
Sbjct: 184 GVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 243
Query: 216 AHISSCALLEQAVKESTGESISWSAS 241
+H S L ++A+ +S SW+ S
Sbjct: 244 SHYSE-GLFQRAIAQSGTALSSWAVS 268
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 10/229 (4%)
Query: 120 RLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAE-RDIIVACLDYRNFPQGT 178
R ++FP G P V++ GG ++ G + R+L+ D +V +DYR P+
Sbjct: 61 RARVYFPKKAAG-LPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK 119
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISW 238
V+D + +V + + G DP+RI + G SAG ++++ + + ++GE +
Sbjct: 120 FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSI---LDRNSGEKLVK 176
Query: 239 SASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIK-DPSIR 297
I Y G +LV+ I L + G + L A K P +
Sbjct: 177 KQVLI-YPVVNXTGVPTASLVEFGVAETTSLPIELXVWFGRQYLKRPEEAYDFKASPLLA 235
Query: 298 DASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
D L P +++ T++Y D +A + G++ V + G H
Sbjct: 236 DLGGLPPALVV---TAEYDPLRDEGELYAYKXKASGSRAVAVRFAGXVH 281
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 110 SVVYGDQPRNRLDLHF-----PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER-D 163
S+ Y + PR D + P PV+V++ GGA+ +G + G +LA + +
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGE 128
Query: 164 IIVACLDYRNFPQGTI---------SDMVK--DVSQGISFVFNNIADYGGDPNRIYLMGQ 212
+IV L+YR P G + SD + D + + +V NI+ +GGDP+ + + G+
Sbjct: 129 VIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 188
Query: 213 SAGAHISSCALL 224
SAG +S ALL
Sbjct: 189 SAGG-MSIAALL 199
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLL------GRQLAER-DIIVACLDYRNFPQGTISDM---- 182
PV++++ GGA+++G + L G ++A R ++IV +YR P G +S
Sbjct: 99 PVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158
Query: 183 -----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESIS 237
+ D I++V NI +GGDP+ I L G+SAG S L K +IS
Sbjct: 159 PGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGESAGGASVSLQTLSPYNKGLIKRAIS 218
Query: 238 WSA 240
S
Sbjct: 219 QSG 221
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLL------GRQLAER-DIIVACLDYRNFPQGTISDM---- 182
PV++++ GGA+++G + L G ++A R ++IV +YR P G +S
Sbjct: 99 PVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158
Query: 183 -----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESIS 237
+ D I++V NI +GGDP+ I L G+SAG S L K +IS
Sbjct: 159 PGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGESAGGASVSLQTLSPYNKGLIKRAIS 218
Query: 238 WSA 240
S
Sbjct: 219 QSG 221
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 110 SVVYGDQPRNRLDLHF-----PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER-D 163
S+ Y + PR D + P PV+V++ GGA+ +G + G +LA + +
Sbjct: 69 SLSYKELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGE 128
Query: 164 IIVACLDYRNFPQGTI---------SDMVK--DVSQGISFVFNNIADYGGDPNRIYLMGQ 212
+IV L+YR P G + SD + D + + +V NI+ +GGDP+ + + G+
Sbjct: 129 VIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 188
Query: 213 SAGAHISSCALL 224
SAG +S ALL
Sbjct: 189 SAGG-MSIAALL 199
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 110 SVVYGDQPRNRLDLHF-----PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER-D 163
S+ Y + PR D + P PV+V++ GGA+ +G + G +LA + +
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGE 128
Query: 164 IIVACLDYRNFPQGTI---------SDMVK--DVSQGISFVFNNIADYGGDPNRIYLMGQ 212
+IV L+YR P G + SD + D + + +V NI+ +GGDP+ + + G+
Sbjct: 129 VIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 188
Query: 213 SAGAHISSCALL 224
SAG +S ALL
Sbjct: 189 SAGG-MSIAALL 199
>pdb|4E14|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With Phenylmethylsulfonyl Fluoride
pdb|4E15|A Chain A, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
pdb|4E15|B Chain B, Crystal Structure Of Kynurenine Formamidase Conjugated
With An Inhibitor
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 33/245 (13%)
Query: 113 YGDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDIIVACLDYR 172
YG + R +D+ + P+ VFV GG W + + L R VA +DY
Sbjct: 63 YG-EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYN 121
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYG--GDPNRIYLMGQSAGAHISSCALLEQAVKE 230
PQ T+ ++ + ++++F DY + + G AGAH+ + L+ V
Sbjct: 122 LCPQVTLEQLMTQFTHFLNWIF----DYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVIT 177
Query: 231 STGESISWSASHIKYYFGLSGGYNLLNL-----VDHCHNRGLYRSIFLSIMEGEESLPVF 285
+ + W+ L G Y+L L V+ + GL E ++
Sbjct: 178 AQRSKMVWAL------IFLCGVYDLRELSNLESVNPKNILGL----------NERNIESV 221
Query: 286 SPAV-RIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGK 344
SP + D ++ +++ I + D + + S +AD L+K G K L+ G
Sbjct: 222 SPMLWEYTDVTVWNSTK----IYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGY 277
Query: 345 SHTDL 349
H D+
Sbjct: 278 DHFDI 282
>pdb|2PBL|A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|B Chain B, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|C Chain C, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|D Chain D, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
Length = 262
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 103 FSSQVRRSVVYGDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER 162
+ R ++ YG+ R++ DL P P + VFV GG W K+ S L +
Sbjct: 35 LQDRARLNLSYGEGDRHKFDLFLPEGT--PVGLFVFVHGGYWXAFDKSSWSHLAVGALSK 92
Query: 163 DIIVACLDYRNFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCA 222
VA Y P+ IS++ + +SQ ++ I I L G SAG H+ +
Sbjct: 93 GWAVAXPSYELCPEVRISEITQQISQAVTAAAKEI------DGPIVLAGHSAGGHLVARX 146
Query: 223 LLEQAVKESTGESI 236
L + + E+ G I
Sbjct: 147 LDPEVLPEAVGARI 160
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 121 LDLHFPTNND-----GPKPVVVFVTGGAWIIGYKAWGSLL-GRQLAER-DIIVACLDYRN 173
L+++ PT +D KPV+V++ GG+++ G G+++ G LA ++IV ++YR
Sbjct: 118 LNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGT---GNMIDGSILASYGNVIVITINYRL 174
Query: 174 FPQGTISDMVK---------DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSC--- 221
G +S + D Q + ++ N+ +GGDP R+ + G AGA S
Sbjct: 175 GILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTL 234
Query: 222 -----ALLEQAVKESTGESISWSASH--IKYYFGLSG--GYNLLNLVD--HCHNRGLYRS 270
L ++A+ +S SW+ ++ KY L+ G N+L+ D C Y+
Sbjct: 235 SHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILADKVGCNMLDTTDMVECLRNKNYKE 294
Query: 271 IFLSIMEGEESLPVFSPAV 289
+ + F P +
Sbjct: 295 LIQQTITPATYHIAFGPVI 313
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 24/131 (18%)
Query: 131 GPKPVVVFVTGGAWIIGYKAWGSLL-GRQLAER-DIIVACLDYRNFPQGTISDMVK---- 184
GPKPV+V++ GG+++ G G+L G LA ++IV ++YR G +S +
Sbjct: 147 GPKPVMVYIHGGSYMEGT---GNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKG 203
Query: 185 -----DVSQGISFVFNNIADYGGDPNRIYLMGQSAG---------AHISSCALLEQAVKE 230
D+ Q + + NI +GGDP RI + G AG +H S L ++A+ +
Sbjct: 204 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSE-GLFQRAIAQ 262
Query: 231 STGESISWSAS 241
S SW+ S
Sbjct: 263 SGTALSSWAVS 273
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIVACLDYRNFPQGTIS--------- 180
P PV+V++ GG + G + GR L AER ++V+ ++YR G ++
Sbjct: 111 PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALPGSREAPG 169
Query: 181 -DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSCALLEQAVKES 231
+ D + +V N+A +GGDP + L GQSAGA H+ S L +AV +S
Sbjct: 170 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGQSAGAASVGMHLLSPPSRGLFHRAVLQS 229
Query: 232 TGESISWS 239
+ W+
Sbjct: 230 GAPNGPWA 237
>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From
Stenotrophomonas Maltophilia
Length = 741
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 49/231 (21%)
Query: 134 PVVVFVTGG-AWIIGYKAW----GSLLGRQLAERDIIVACLDYRNFP------------- 175
PV V+V GG A +W L + LA++ +V LD R P
Sbjct: 518 PVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGK 577
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGES 235
QGT+ V D +G++++ DP RI + G S G +++ LL +A
Sbjct: 578 QGTVE--VADQLRGVAWLKQQPWV---DPARIGVQGWSNGGYMT-LMLLAKASD------ 625
Query: 236 ISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIKDPS 295
Y G++G + GLY S + E LP + A +
Sbjct: 626 --------SYACGVAGA--------PVTDWGLYDSHY---TERYMDLPARNDAGYREARV 666
Query: 296 IRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
+ L P++L HG +D ++ S + ALQK G EL+ YPG H
Sbjct: 667 LTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKH 717
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER-DIIVACLDYR------- 172
L++ P + +PV+ ++ GGA++ G + G A+ D++V ++YR
Sbjct: 87 LNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFL 146
Query: 173 --------NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA 216
+ Q ++ V+ + +V NIA +GGDP+ I + G+SAGA
Sbjct: 147 HLGDSFGEAYAQAGNLGILDQVA-ALRWVKENIAAFGGDPDNITIFGESAGA 197
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAER-DIIVACLDYR------- 172
L++ P + +PV+ ++ GGA++ G + G A+ D++V ++YR
Sbjct: 87 LNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFL 146
Query: 173 --------NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA 216
+ Q ++ V+ + +V NIA +GGDP+ I + G+SAGA
Sbjct: 147 HLGDSFGEAYAQAGNLGILDQVA-ALRWVKENIAAFGGDPDNITIFGESAGA 197
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 134 PVVVFVTGGAWIIGYKAW---GSLLGRQLA-ERDIIVACLDYR----NF-------PQGT 178
PV++++ GG + +G + ++ + +A + II ++YR F +G+
Sbjct: 115 PVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGS 174
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ +KD G+ +V +NIA +GGDP ++ + G+SAG+ C +L
Sbjct: 175 ANAGLKDQRLGMQWVADNIAAFGGDPTKVTIFGESAGSMSVMCHIL 220
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 134 PVVVFVTGGAWIIGYKAW---GSLLGRQLA-ERDIIVACLDYR----NF-------PQGT 178
PV++++ GG + +G + ++ + +A + II ++YR F +G+
Sbjct: 130 PVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGS 189
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ +KD G+ +V +NIA +GGDP ++ + G+SAG+ C +L
Sbjct: 190 ANAGLKDQRLGMQWVADNIAAFGGDPTKVTIFGESAGSMSVMCHIL 235
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 121 LDLHFPTN--NDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDIIVACLDYRNFPQGT 178
L+++ P + G PV+V++ GG ++G + L A +++V + YR G
Sbjct: 97 LNIYTPADLTKRGRLPVMVWIHGGGLMVGGASTYDGLALS-AHENVVVVTIQYRLGIWGF 155
Query: 179 ISDMVK---------DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVK 229
S + D + +V +NIA++GGDP + + G+SAG S LL K
Sbjct: 156 FSTGDEHSRGNWGHLDQVAALRWVQDNIANFGGDPGSVTIFGESAGGQSVSILLLSPLTK 215
Query: 230 ESTGESISWSA 240
+IS S
Sbjct: 216 NLFHRAISESG 226
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQ-LAERDIIVACLDYRNFPQGTIS---------DMV 183
PV+VF+ GG + G L G + L +D+IV +YR G +S +
Sbjct: 116 PVLVFIHGGGFAFG-SGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGL 174
Query: 184 KDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 227
+D+ + +V N +GG P+ + LMGQSAGA + L +A
Sbjct: 175 RDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKA 218
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIVACLDYRNFPQGTIS--------- 180
P PV+V++ GG + G + GR L AER ++V+ ++YR G ++
Sbjct: 110 PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALPGSREAPG 168
Query: 181 -DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSCALLEQAVKES 231
+ D + +V N+A +GGDP + L G+SAGA H+ S L +AV +S
Sbjct: 169 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSRGLFHRAVLQS 228
Query: 232 TGESISWS 239
+ W+
Sbjct: 229 GAPNGPWA 236
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIVACLDYRNFPQGTIS--------- 180
P PV+V++ GG + G + GR L AER ++V+ ++YR G ++
Sbjct: 108 PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALPGSREAPG 166
Query: 181 -DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSCALLEQAVKES 231
+ D + +V N+A +GGDP + L G+SAGA H+ S L +AV +S
Sbjct: 167 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSRGLFHRAVLQS 226
Query: 232 TGESISWS 239
+ W+
Sbjct: 227 GAPNGPWA 234
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIVACLDYRNFPQGTIS--------- 180
P PV+V++ GG + G + GR L AER ++V+ ++YR G ++
Sbjct: 107 PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALPGSREAPG 165
Query: 181 -DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSCALLEQAVKES 231
+ D + +V N+A +GGDP + L G+SAGA H+ S L +AV +S
Sbjct: 166 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSRGLFHRAVLQS 225
Query: 232 TGESISWS 239
+ W+
Sbjct: 226 GAPNGPWA 233
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 130 DGPK-PVVVFVTGGAWIIGYKAWGSLLGRQLAE-RDIIVACLDYRNFPQGTISDMVKDVS 187
DG + P VV+ GG +++G + R+LA +V +DYR P+ V+D
Sbjct: 72 DGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKFPAAVEDAY 131
Query: 188 QGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSASHIKYYF 247
+V +N G D +I + G SAG ++++ + + GES +KY
Sbjct: 132 DAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAI---MARDRGESF------VKYQV 182
Query: 248 GLSGGYNL-----LNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVR-IKDPSIRDASS 301
+ NL ++ V++ + + L G + A+ P D S+
Sbjct: 183 LIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSN 242
Query: 302 LLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
L P +++ T++Y D +A L+ G + V Y G H
Sbjct: 243 LPPALVI---TAEYDPLRDEGELYAHLLKTRGVRAVAVRYNGVIH 284
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 134 PVVVFVTGGAWIIG----YKAWGSLLGRQLAERDIIVACLDYR----NF-------PQGT 178
PV++++ GG + IG + + L + II ++YR F +G+
Sbjct: 115 PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ +KD G+ +V +NIA +GGDP+++ + G+SAG+ C L+
Sbjct: 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLI 220
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 134 PVVVFVTGGAWIIG----YKAWGSLLGRQLAERDIIVACLDYR----NF-------PQGT 178
PV++++ GG + IG + + L + II ++YR F +G+
Sbjct: 115 PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174
Query: 179 ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ +KD G+ +V +NIA +GGDP+++ + G+SAG+ C L+
Sbjct: 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLI 220
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQLAE-RDIIVACLDYRNFPQGTISDMVKDVSQGISF 192
PV+V+ GG ++I L R++A + V +DYR P+ V D +
Sbjct: 80 PVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKW 139
Query: 193 VFNNIADYGGDPNRIYLMGQSAGAHISSC 221
V N + DP++I++ G SAG ++++
Sbjct: 140 VAENAEELRIDPSKIFVGGDSAGGNLAAA 168
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 142 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 201
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 202 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 261
Query: 233 GESISWSA 240
+ W+
Sbjct: 262 TPNGPWAT 269
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWSA 240
+ W+
Sbjct: 231 TPNGPWAT 238
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 108 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 167
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 168 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 227
Query: 233 GESISWS 239
+ W+
Sbjct: 228 TPNGPWA 234
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWSA 240
+ W+
Sbjct: 231 TPNGPWAT 238
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 108 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 167
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 168 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 227
Query: 233 GESISWSA 240
+ W+
Sbjct: 228 TPNGPWAT 235
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 107 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 166
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 167 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 226
Query: 233 GESISWSA 240
+ W+
Sbjct: 227 TPNGPWAT 234
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWSA 240
+ W+
Sbjct: 231 TPNGPWAT 238
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+SAGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWSA 240
+ W+
Sbjct: 231 TPNGPWAT 238
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIVACLDYRNFPQGTIS--------- 180
P PV+V++ GG + G + GR L AER ++V+ ++YR G ++
Sbjct: 111 PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALPGSREAPG 169
Query: 181 -DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSCALLEQAVKES 231
+ D + +V N+A +GGDP + L G+ AGA H+ S L +AV +S
Sbjct: 170 NVGLLDQRLALQWVQENVAAFGGDPTSVTLFGEXAGAASVGMHLLSPPSRGLFHRAVLQS 229
Query: 232 TGESISWS 239
+ W+
Sbjct: 230 GAPNGPWA 237
>pdb|2WSL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
pdb|1XLU|A Chain A, X-Ray Structure Of Di-Isopropyl-Phosphoro-Fluoridate (Dfp)
Inhibited Butyrylcholinesterase After Aging
pdb|1XLV|A Chain A, Ethylphosphorylated Butyrylcholinesterase (Aged) Obtained
By Reaction With Echothiophate
pdb|1XLW|A Chain A, Diethylphosphorylated Butyrylcholinesterase (Nonaged)
Obtained By Reaction With Echothiophate
Length = 529
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G++AGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEAAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|2XQF|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vx
pdb|2XQG|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vr
pdb|2XQI|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Cvx
pdb|2XQJ|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(R)
pdb|2XQK|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(S)
Length = 527
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 100 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 159
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 160 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 207
>pdb|2J4C|A Chain A, Structure Of Human Butyrylcholinesterase In Complex With
10mm Hgcl2
Length = 529
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTISDMVK-------- 184
PV+V++ GG ++G A + G LA +++V + YR G S +
Sbjct: 116 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 185 -DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSA 240
D + +V +NIA +GG+P + + G+SAG S +L K +IS S
Sbjct: 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 230
>pdb|2WID|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIG|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
Length = 529
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 131 GPKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFP 175
PKP V++++ GG + G + G+ LA + +IV ++YR P
Sbjct: 101 APKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|1P0I|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase
pdb|1P0M|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase In
Complex With A Choline Molecule
pdb|1P0P|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase In Complex With The Substrate Analog
Butyrylthiocholine
pdb|1P0Q|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase
Length = 529
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 131 GPKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFP 175
PKP V++++ GG + G + G+ LA + +IV ++YR P
Sbjct: 101 APKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2WIL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIL|B Chain B, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
Length = 529
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|4AQD|A Chain A, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
pdb|4AQD|B Chain B, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
Length = 531
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 104 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 163
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 164 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 211
>pdb|2WIF|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIJ|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIK|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta6
pdb|4BBZ|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 2-min Soak): Cresyl-phosphoserine Adduct
Length = 529
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTISDMVK-------- 184
PV+V++ GG ++G A + G LA +++V + YR G S +
Sbjct: 116 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 185 -DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSA 240
D + +V +NIA +GG+P + + G+SAG S +L K +IS S
Sbjct: 174 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 230
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTISDMVK-------- 184
PV+V++ GG ++G A + G LA +++V + YR G S +
Sbjct: 114 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 171
Query: 185 -DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSA 240
D + +V +NIA +GG+P + + G+SAG S +L K +IS S
Sbjct: 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 228
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTISDMVK-------- 184
PV+V++ GG ++G A + G LA +++V + YR G S +
Sbjct: 111 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 168
Query: 185 -DVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKESTGESISWSA 240
D + +V +NIA +GG+P + + G+SAG S +L K +IS S
Sbjct: 169 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 225
>pdb|2PM8|A Chain A, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
pdb|2PM8|B Chain B, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
Length = 574
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|3O9M|A Chain A, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
pdb|3O9M|B Chain B, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
Length = 574
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+ AGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSC---ALLEQAVKEST 232
+ D + +V NIA +GGDP + L G+ AGA HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRSLFHRAVLQSG 230
Query: 233 GESISWS 239
+ W+
Sbjct: 231 TPNGPWA 237
>pdb|2XMB|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Sulfate
pdb|2XMC|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Fluoride Anion
pdb|2XMD|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Echothiophate
pdb|2XMG|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Vx
Length = 529
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 131 GPKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFP 175
PKP V++++ GG + G + G+ LA + +IV ++YR P
Sbjct: 101 APKPKNATVLIWIYGGHFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + + D + +V NIA +GG+P + L G+SAGA S LL
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|4B0O|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Benzyl
Pyridinium-4-Methyltrichloroacetimidate
pdb|4B0P|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Methyl
2-(Pentafluorobenzyloxyimino) Pyridinium
Length = 529
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 131 GPKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFP 175
PKP V++++ GG + G + G+ LA + +IV ++YR P
Sbjct: 101 APKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + + D + +V NIA +GG+P + L G+ AGA S LL
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|3DJY|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
pdb|3DKK|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
Length = 529
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 131 GPKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFP 175
PKP V++++ GG + G + G+ LA + +IV ++YR P
Sbjct: 101 APKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNP 160
Query: 176 QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + + D + +V NIA +GG+P + L G+ AGA S LL
Sbjct: 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|2Y1K|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 12h Soak): Phosphoserine Adduct
Length = 529
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 102 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 161
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+ AGA S LL
Sbjct: 162 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|4AXB|A Chain A, Crystal Structure Of Soman-aged Human
Butyrylcholinesterase In Complex With 2-pam
Length = 527
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 132 PKP----VVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYR----------NFPQ 176
PKP V++++ GG + G + G+ LA + +IV ++YR P+
Sbjct: 100 PKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE 159
Query: 177 GTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALL 224
+ + D + +V NIA +GG+P + L G+ AGA S LL
Sbjct: 160 APGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 207
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ------SAGAHISSC---ALLEQAVKES 231
+ D + +V NIA +GGDP + L G+ S G HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSRSLFHRAVLQS 230
Query: 232 TGESISWSA 240
+ W+
Sbjct: 231 GTPNGPWAT 239
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 108 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 167
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ------SAGAHISSC---ALLEQAVKES 231
+ D + +V NIA +GGDP + L G+ S G HI S +L +AV +S
Sbjct: 168 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSRSLFHRAVLQS 227
Query: 232 TGESISWSA 240
+ W+
Sbjct: 228 GTPNGPWAT 236
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 108 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 167
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ------SAGAHISSC---ALLEQAVKES 231
+ D + +V NIA +GGDP + L G+ S G HI S +L +AV +S
Sbjct: 168 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSRSLFHRAVLQS 227
Query: 232 TGESISWSA 240
+ W+
Sbjct: 228 GTPNGPWAT 236
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 108 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 167
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ------SAGAHISSC---ALLEQAVKES 231
+ D + +V NIA +GGDP + L G+ S G HI S +L +AV +S
Sbjct: 168 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSRSLFHRAVLQS 227
Query: 232 TGESISWSA 240
+ W+
Sbjct: 228 GTPNGPWAT 236
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 132 PKPVVVFVTGGAWIIGYKAWGSLLGRQLAERD-IIVACLDYRNFPQGTIS---------- 180
P PV++++ GG + G + GR LA+ + ++ ++YR G ++
Sbjct: 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN 170
Query: 181 DMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ------SAGAHISSC---ALLEQAVKES 231
+ D + +V NIA +GGDP + L G+ S G HI S +L +AV +S
Sbjct: 171 VGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSRSLFHRAVLQS 230
Query: 232 TGESISWSA 240
+ W+
Sbjct: 231 GTPNGPWAT 239
>pdb|1GQR|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Rivastigmine
pdb|1GQS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Nap
pdb|1JJB|A Chain A, A Neutral Molecule In Cation-Binding Site: Specific
Binding Of Peg-Sh To Acetylcholinesterase From Torpedo
Californica
Length = 532
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 94 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 153
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 154 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 213
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 214 DLFRRAILQSGSPNCPWASVSV 235
>pdb|1FSS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Fasciculin-Ii
pdb|1CFJ|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With O-Isopropylmethylphosphonofluoridate
(Gb, Sarin)
pdb|1VXO|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1VXR|A Chain A, O-Ethylmethylphosphonylated Acetylcholinesterase Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1QTI|A Chain A, Acetylcholinesterase (E.C.3.1.1.7)
pdb|1QID|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point A) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIE|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point B) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIF|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point C) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIG|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point D) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIH|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point E) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QII|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point F) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIJ|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point G) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIK|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point H) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIM|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point I) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1EA5|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica At 1.8a Resolution
pdb|1GPK|A Chain A, Structure Of Acetylcholinesterase Complex With
(+)-Huperzine A At 2.1a Resolution
pdb|1GPN|A Chain A, Structure Of Acetylcholinesterase Complexed With Huperzine
B At 2.35a Resolution
pdb|2C4H|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
500mm Acetylthiocholine
pdb|2C5F|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium
pdb|2C5G|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Thiocholine
pdb|1AMN|A Chain A, Transition State Analog: Acetylcholinesterase Complexed
With M-(N,N,N-Trimethylammonio)trifluoroacetophenone
pdb|1AX9|A Chain A, Acetylcholinesterase Complexed With Edrophonium, Laue Data
pdb|1OCE|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Mf268
pdb|1VOT|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Huperzine A
pdb|2ACE|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica
pdb|2ACK|A Chain A, Acetylcholinesterase Complexed With Edrophonium,
Monochromatic Data
pdb|2V96|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V96|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V97|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V97|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V98|A Chain A, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2V98|B Chain B, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2VA9|A Chain A, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VA9|B Chain B, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VJA|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJA|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJB|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJB|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJC|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJC|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJD|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VJD|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VT6|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT6|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT7|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2VT7|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2WFZ|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman
pdb|2WG0|A Chain A, Aged Conjugate Of Torpedo Californica Acetylcholinesterase
With Soman (Obtained By In Crystallo Aging)
pdb|2WG1|A Chain A, Ternary Complex Of The Aged Conjugate Of Torpedo
Californica Aceylcholinesterase With Soman And 2-Pam
pdb|2WG2|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman (Alternative Refinement)
pdb|2XI4|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
pdb|2XI4|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
Length = 537
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|3I6M|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Piperidinopropyl-Galanthamine
pdb|3I6Z|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Saccharinohexyl-Galanthamine
Length = 534
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 96 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 155
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 156 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 215
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 216 DLFRRAILQSGSPNCPWASVSV 237
>pdb|1EEA|A Chain A, Acetylcholinesterase
Length = 534
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|2W6C|X Chain X, Ache In Complex With A Bis-(-)-Nor-Meptazinol Derivative
pdb|2W9I|A Chain A, Ache In Complex With Methylene Blue
Length = 586
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 118 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 177
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 178 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 237
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 238 DLFRRAILQSGSPNCPWASVSV 259
>pdb|2CEK|A Chain A, Conformational Flexibility In The Peripheral Site Of
Torpedo Californica Acetylcholinesterase Revealed By The
Complex Structure With A Bifunctional Inhibitor
Length = 535
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|1UT6|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8-
Diaminooctane At 2.4 Angstroms Resolution.
pdb|1ACJ|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
pdb|1ACL|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
Length = 537
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HI---SSC 221
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 222 ALLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|1SOM|A Chain A, Torpedo Californica Acetylcholinesterase Inhibited By
Nerve Agent Gd (Soman).
pdb|1DX6|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Galanthamine At 2.3a Resolution
pdb|1E3Q|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Bw284c51
pdb|1E66|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Huprine X At 2.1a Resolution
pdb|1HBJ|A Chain A, X-Ray Crystal Structure Of Complex Between Torpedo
Californica Ache And A Reversible Inhibitor, 4-Amino-5-
Fluo Ro-2-Methyl-3-(3-Trifluoroacetylbenzylthiomethyl)
Quinoline
pdb|1H22|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(10)-Hupyridone At 2.15a Resolution
pdb|1H23|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(12)-Hupyridone At 2.15a Resolution
pdb|1W4L|A Chain A, Complex Of Tcache With Bis-Acting Galanthamine Derivative
pdb|1W6R|A Chain A, Complex Of Tcache With Galanthamine Derivative
pdb|1W75|A Chain A, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W75|B Chain B, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W76|A Chain A, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1W76|B Chain B, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1ODC|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-4'-Quinolyl-N'-9"-(1",2",3",4"
-Tetrahydroacridinyl)-1,8-Diaminooctane At 2.2a
Resolution
pdb|1U65|A Chain A, Ache W. Cpt-11
pdb|1ZGB|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(R)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|B Chain B, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|2BAG|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With Ganstigmine
pdb|2CKM|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (7 Carbon Linker)
pdb|2CMF|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (5 Carbon Linker)
pdb|2J4F|A Chain A, Torpedo Acetylcholinesterase - Hg Heavy-Atom Derivative
pdb|1EVE|A Chain A, Three Dimensional Structure Of The Anti-Alzheimer Drug,
E2020 (Aricept), Complexed With Its Target
Acetylcholinesterase
pdb|2J3Q|A Chain A, Torpedo Acetylcholinesterase Complexed With Fluorophore
Thioflavin T
pdb|2VQ6|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With 2-
Pam
pdb|2J3D|A Chain A, Native Monoclinic Form Of Torpedo Acetylcholinesterase
pdb|3M3D|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
Xenon
pdb|3ZV7|A Chain A, Torpedo Californica Acetylcholinesterase Inhibition By
Bisnorcymserine
Length = 543
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+SAG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 129 NDGPKPVVVFVTGGAWIIGYKA---WGSLLGRQLAERDIIVACLDYRNFPQGTISDMVKD 185
N P+VV+ GG +I+ A + +++A +DYR P+ + D
Sbjct: 79 NSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDD 138
Query: 186 VSQGISFV-------FNNIADYGGDPNRIYLMGQSAGAHISSCALLEQA 227
+ + ++ N AD+ + ++MG+SAG +I+ A L A
Sbjct: 139 AMEALQWIKDSRDEWLTNFADF----SNCFIMGESAGGNIAYHAGLRAA 183
>pdb|3F67|A Chain A, Crystal Structure Of Putative Dienelactone Hydrolase From
Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578
Length = 241
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 83/237 (35%), Gaps = 63/237 (26%)
Query: 126 PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAERDIIVACLD----------YRNFP 175
P N DGP P+V+ V I G L R+LA+ + + Y + P
Sbjct: 25 PKNADGPLPIVIVVQE---IFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIP 81
Query: 176 QGTISDMVKDVSQG-----ISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKE 230
++V V + V + A +GGD +R+ + G G I+ L A
Sbjct: 82 T-LFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRIT---WLYAAHNP 137
Query: 231 STGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVR 290
+++W + GE+SL SP
Sbjct: 138 QLKAAVAWYGK----------------------------------LVGEKSLN--SP--- 158
Query: 291 IKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 347
K P + A L P++ +G D SIP D AL+ A E+V+YP H
Sbjct: 159 -KHP-VDIAVDLNAPVLGLYGAKDASIPQDTVETXRQALRAANATAEIVVYPEADHA 213
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Query: 114 GDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIG-YKAWGSLLGRQLAERDIIVACLDYR 172
G + + +++P GP V+V+ GG +++G +++ L + +DYR
Sbjct: 72 GSETNIKARVYYP-KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKEST 232
P+ V D + +V+NN + G I + G SAG ++++ + S
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAI-----LSK 184
Query: 233 GESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIK 292
E+I + Y + ++L+ + + G + + G++ L F+ + +
Sbjct: 185 KENIKLKYQVLIY---PAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFR 241
Query: 293 -DPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
P + D + L P +I+ T+++ D A+A+ L + G + V + H
Sbjct: 242 FSPILADLNDLPPALII---TAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIH 293
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Query: 114 GDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIG-YKAWGSLLGRQLAERDIIVACLDYR 172
G + + +++P GP V+V+ GG +++G +++ L + +DYR
Sbjct: 72 GSETNIKARVYYP-KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKEST 232
P+ V D + +V+NN + G I + G SAG ++++ + S
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAI-----LSK 184
Query: 233 GESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIK 292
E+I + Y + ++L+ + + G + + G++ L F+ + +
Sbjct: 185 KENIKLKYQVLIY---PAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFR 241
Query: 293 -DPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
P + D + L P +I+ T+++ D A+A+ L + G + V + H
Sbjct: 242 FSPILADLNDLPPALII---TAEHDPLRDQGEAYANKLLQSGVQVTSVKFNNVIH 293
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 114 GDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIG-YKAWGSLLGRQLAERDIIVACLDYR 172
G + + +++P GP V+V+ GG +++G +++ L + +DYR
Sbjct: 72 GSETNIKARVYYP-KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKEST 232
P+ V D + +V+NN + G I + G SAG ++++ + S
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAI-----LSK 184
Query: 233 GESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIK 292
E+I + Y + ++L+ + + G + + G++ L F+ + +
Sbjct: 185 KENIKLKYQVLIY---PAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFR 241
Query: 293 -DPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAK 335
P + D + L P +I+ T+++ D A+A+ L + G +
Sbjct: 242 FSPILADLNDLPPALII---TAEHDPLRDQGEAYANKLLQSGVQ 282
>pdb|2DFP|A Chain A, X-Ray Structure Of Aged Di-Isopropyl-Phosphoro-Fluoridate
(Dfp) Bound To Acetylcholinesterase
Length = 534
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 96 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 155
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+ AG HI S
Sbjct: 156 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 215
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 216 DLFRRAILQSGSPNCPWASVSV 237
>pdb|3GEL|A Chain A, O-Methylphosphorylated Torpedo Acetylcholinesterase
Obtained By Reaction With Methyl Paraoxon (Aged)
Length = 532
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 94 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 153
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+ AG HI S
Sbjct: 154 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 213
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 214 DLFRRAILQSGSPNCPWASVSV 235
>pdb|2C58|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Acetylthiocholine
Length = 537
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 121 LDLHFPTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLA-ERDIIVACLDYRNFPQGTI 179
L++ P+ V+V++ GG + G G+ LA ++++ L YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 180 SDM----------VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA-----HISSCA-- 222
+ + D + +V +NI +GGDP + + G+ AG HI S
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 216
Query: 223 -LLEQAVKESTGESISWSASHI 243
L +A+ +S + W++ +
Sbjct: 217 DLFRRAILQSGSPNCPWASVSV 238
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 114 GDQPRNRLDLHFPTNNDGPKPVVVFVTGGAWIIG-YKAWGSLLGRQLAERDIIVACLDYR 172
G + + +++P GP V+V+ GG +++G +++ L + +DYR
Sbjct: 72 GSETNIKARVYYP-KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 173 NFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAVKEST 232
P+ V D + +V+NN + G I + G SAG ++++ + S
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAI-----LSK 184
Query: 233 GESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEESLPVFSPAVRIK 292
E+I + Y + ++L+ + + G + + G++ L F+ + +
Sbjct: 185 KENIKLKYQVLIY---PAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFR 241
Query: 293 -DPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAK 335
P + D + L P +I+ T+++ D A+A+ L + G +
Sbjct: 242 FSPILADLNDLPPALII---TAEHDPLRDQGEAYANKLLQSGVQ 282
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 23/102 (22%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLL--GRQLAERDIIVA------CLDYRNFP---------- 175
PV++++ GG G++ GS L G Q+ + +++ ++YR
Sbjct: 115 PVMLWIFGG----GFELGGSSLFPGDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQ 170
Query: 176 -QGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGA 216
+G+ + + D + +V +NIA +GGDP+++ + G+SAG+
Sbjct: 171 NEGSGNAGLHDQRLAMQWVADNIAGFGGDPSKVTIYGESAGS 212
>pdb|2PPL|A Chain A, Human Pancreatic Lipase-Related Protein 1
Length = 485
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 138 FVTGGAWIIGYKAWGSLLGRQLAE-RDIIVACLDYRNFPQGTISDMVKDV----SQGISF 192
F+ G G ++W + + ++L E ++ C+D++ Q T + +V +Q
Sbjct: 99 FIIHGFIDKGDESWVTDMCKKLFEVEEVNCICVDWKKGSQATYTQAANNVRVVGAQVAQM 158
Query: 193 VFNNIADYGGDPNRIYLMGQSAGAHIS 219
+ + +Y P++++L+G S GAH++
Sbjct: 159 LDILLTEYSYPPSKVHLIGHSLGAHVA 185
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 305 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 347
P+++ HG D ++P +AS+AF+ + +LV PG +H
Sbjct: 191 PVLIVHGDQDEAVPYEASVAFSKQYKNC----KLVTIPGDTHC 229
>pdb|3HXK|A Chain A, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|B Chain B, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|C Chain C, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|D Chain D, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
Length = 276
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 166 VACLDYRNFPQGT----ISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSC 221
V L+Y +GT +S +++V S + N ++ +P +++L+G SAG H+++
Sbjct: 76 VLLLNYTVXNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAW 135
Query: 222 ALLEQAVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRGLYRSIFLSIMEGEES 281
+ + G + + + + FG + N E+
Sbjct: 136 YGNSEQIHRPKGVILCYPVT--SFTFGWPSDLSHFNF-------------------EIEN 174
Query: 282 LPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 331
+ ++ + ++ +S PP ++H D +P S+ + D L K
Sbjct: 175 ISEYNISEKV--------TSSTPPTFIWHTADDEGVPIYNSLKYCDRLSK 216
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 132 PKPVVVFVTGGAWIIGYKA---WGSLLGRQLAERDIIVACLDYRNFPQGTISDMVKDVSQ 188
P PV++F GG+++ + + SL R + +V ++YR P+ D
Sbjct: 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWT 170
Query: 189 GISFVFNN-IADYGGDPN-RIYLMGQSAGAHIS 219
+ +V + GGD R++L G S+G +I+
Sbjct: 171 ALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIA 203
>pdb|1UKC|A Chain A, Crystal Structure Of Aspergillus Niger Esta
pdb|1UKC|B Chain B, Crystal Structure Of Aspergillus Niger Esta
Length = 522
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 134 PVVVFVTGGAWIIGYKAWGSLLGRQL--AERDIIV-ACLDYRNFPQGTI-SDMVK----- 184
PV +F+ GG + A + G Q+ A D+IV +YR G + S+ V+
Sbjct: 103 PVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDL 160
Query: 185 -----DVSQGISFVFNNIADYGGDPNRIYLMGQSAGA 216
D + + +V I +GGDP+ I + G SAGA
Sbjct: 161 NAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGA 197
>pdb|2WBK|A Chain A, Structure Of The Michaelis Complex Of Beta-Mannosidase,
Man2a, Provides Insight Into The Conformational
Itinerary Of Mannoside Hydrolysis
pdb|2WBK|B Chain B, Structure Of The Michaelis Complex Of Beta-Mannosidase,
Man2a, Provides Insight Into The Conformational
Itinerary Of Mannoside Hydrolysis
Length = 847
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 306 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGK--DDLF 363
+ F T D +P S+++ +++ K EL L+ D+F++ PL+G + D+ F
Sbjct: 748 VHFFRKTKDLQLPP-TSVSYQ--MKQTDGKCELTLFSSMLAKDIFIETPLQGARYSDNFF 804
Query: 364 D 364
D
Sbjct: 805 D 805
>pdb|2JE8|A Chain A, Structure Of A Beta-Mannosidase From Bacteroides
Thetaiotaomicron
pdb|2JE8|B Chain B, Structure Of A Beta-Mannosidase From Bacteroides
Thetaiotaomicron
Length = 848
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 306 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGK--DDLF 363
+ F T D +P S+++ +++ K EL L+ D+F++ PL+G + D+ F
Sbjct: 750 VHFFRKTKDLQLPP-TSVSYQ--MKQTDGKCELTLFSSMLAKDIFIETPLQGARYSDNFF 806
Query: 364 D 364
D
Sbjct: 807 D 807
>pdb|2VQU|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VQU|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
Length = 846
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 306 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGK--DDLF 363
+ F T D +P S+++ +++ K EL L+ D+F++ PL+G + D+ F
Sbjct: 748 VHFFRKTKDLQLPP-TSVSYQ--MKQTDGKCELTLFSSMLAKDIFIETPLQGARYSDNFF 804
Query: 364 D 364
D
Sbjct: 805 D 805
>pdb|2VJX|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VJX|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VL4|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VL4|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VMF|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VMF|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VO5|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VO5|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VOT|A Chain A, Structural And Biochemical Evidence For A Boat-like
Transition State In Beta-mannosidases
pdb|2VOT|B Chain B, Structural And Biochemical Evidence For A Boat-like
Transition State In Beta-mannosidases
pdb|2VQT|A Chain A, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VQT|B Chain B, Structural And Biochemical Evidence For A Boat-Like
Transition State In Beta-Mannosidases
pdb|2VR4|A Chain A, Transition-state Mimicry In Mannoside Hydrolysis:
Characterisation Of Twenty Six Inhibitors And Insight
Into Binding From Linear Free Energy Relationships And
3-d Structure
pdb|2VR4|B Chain B, Transition-state Mimicry In Mannoside Hydrolysis:
Characterisation Of Twenty Six Inhibitors And Insight
Into Binding From Linear Free Energy Relationships And
3-d Structure
Length = 846
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 306 IILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHTDLFLQDPLRGGK--DDLF 363
+ F T D +P S+++ +++ K EL L+ D+F++ PL+G + D+ F
Sbjct: 748 VHFFRKTKDLQLPP-TSVSYQ--MKQTDGKCELTLFSSMLAKDIFIETPLQGARYSDNFF 804
Query: 364 D 364
D
Sbjct: 805 D 805
>pdb|3K2I|A Chain A, Human Acyl-Coenzyme A Thioesterase 4
pdb|3K2I|B Chain B, Human Acyl-Coenzyme A Thioesterase 4
Length = 422
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 292 KDPSIRDASSLLPPIILFHGTSDYSIPSDA-SMAFADALQKVGA-KPELVLYPGKSH 346
K+PS+ PI+L G D++ S+ + ++ LQ G KP+++ YPG H
Sbjct: 305 KNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 361
>pdb|2HDW|A Chain A, Crystal Structure Of Hypothetical Protein Pa2218 From
Pseudomonas Aeruginosa
pdb|2HDW|B Chain B, Crystal Structure Of Hypothetical Protein Pa2218 From
Pseudomonas Aeruginosa
Length = 367
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 305 PIILFHGTSDYSIPSDASMAFADALQKVGAKP-ELVLYPGKSHTDLF 350
PI+L HG +S F++ A+P EL++ PG SH DL+
Sbjct: 308 PILLIHGERAHS------RYFSETAYAAAAEPKELLIVPGASHVDLY 348
>pdb|3TKA|A Chain A, Crystal Structure And Solution Saxs Of Methyltransferase
Rsmh From E.Coli
Length = 347
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 153 SLLGRQLAERDIIVACLDYRNFPQGTISDMVKDVSQGISFVFNNIADYGGDPNRIYLMGQ 212
S LG +AERD+I +D G S + D +G SF+ + D DP R GQ
Sbjct: 114 SALGEYVAERDLI-GKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTR----GQ 168
Query: 213 SAGAHISSC 221
SA + +
Sbjct: 169 SAAEWLQTA 177
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 17/121 (14%)
Query: 126 PTNNDGPKPVVVFVTGGAWIIGYKAWGSLLGRQLAE-RDIIVACLDYR------------ 172
P N P+++++ GG ++ G +A ++IVA YR
Sbjct: 134 PQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPE 193
Query: 173 ---NFPQGTISDM-VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLEQAV 228
F + ++ + D + I ++ +N +GG+P + L G+SAG+ + L+
Sbjct: 194 MPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVT 253
Query: 229 K 229
+
Sbjct: 254 R 254
>pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a
pdb|2Z3Z|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Complexd
With An Inhibitor
Length = 706
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 274 SIMEGEESL--PVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPSDASMAFADALQK 331
+IM GE P +P ++ A L ++L HG D + S+ F DA K
Sbjct: 610 AIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVK 669
Query: 332 VGAKPELVLYPGKSH 346
P+ +YP H
Sbjct: 670 ARTYPDYYVYPSHEH 684
>pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl
Aminopeptidase Complexed With Substrate
Length = 706
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 296 IRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
++ A L ++L HG D + S+ F DA K P+ +YP H
Sbjct: 634 LKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEH 684
>pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase
From Porphyromonas Gingivalis
pdb|2EEP|A Chain A, Prolyl Tripeptidyl Aminopeptidase Complexed With An
Inhibitor
Length = 706
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 296 IRDASSLLPPIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSH 346
++ A L ++L HG D + S+ F DA K P+ +YP H
Sbjct: 634 LKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEH 684
>pdb|2YPL|E Chain E, Structural Features Underlying T-cell Receptor Sensitivity
To Concealed Mhc Class I Micropolymorphisms
Length = 238
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 101 YFFSSQVRRSVVYGDQPRN--RLDLHFPTNND-------GPKPVVVFVTGGAW 144
Y SS++R S + PRN R + F + GPKPV V+ AW
Sbjct: 182 YSLSSRLRVSATFWQNPRNHFRCQVQFTGSRRMTSGPRIGPKPVTQIVSAEAW 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 44 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 102
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 103 ERGALQEELARSFFW---------------QVLEAVRHCHNXGVLHRDIKDENILIDLNR 147
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 148 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 179
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 91 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 149
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 150 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 195 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 226
>pdb|3RKP|A Chain A, Crystal Structure Of Bcpa(D312a), The Major Pilin Subunit
Of Bacillus Cereus
pdb|3RKP|B Chain B, Crystal Structure Of Bcpa(D312a), The Major Pilin Subunit
Of Bacillus Cereus
Length = 355
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 99 YYYFFSSQVRRSVVYGDQPRNRLDLHFPTNND-----GPKPVVVFVTGG 142
++ SQV+ V G + N +HF ND KPVVV T G
Sbjct: 203 FHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIPTTG 251
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 91 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 149
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 150 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 195 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 135 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 180 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 136 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 181 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 71 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 129
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 130 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 174
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 175 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 206
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 96 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 154
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 155 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 199
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 200 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 231
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 135 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 180 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 211
>pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|B Chain B, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|C Chain C, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|D Chain D, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|E Chain E, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|F Chain F, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|G Chain G, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
pdb|4F21|H Chain H, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY
PROTEIN From Francisella Tularensis
Length = 246
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 305 PIILFHGTSDYSIPSDASMAFADALQKVGAKPELVLYPGKSHT 347
PI++ HGT D +P +D L+ G E Y G H+
Sbjct: 185 PILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHS 227
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 48 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERMEPVQDLFDFIT 106
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 107 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 151
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 152 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 183
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 123 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 167
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 168 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 199
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 136 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 181 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 212
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 136 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 181 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 212
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 135 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 180 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 211
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 77 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 136 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 181 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 212
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 76 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 135 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 180 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 123 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 167
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 168 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 199
>pdb|3KPT|A Chain A, Crystal Structure Of Bcpa, The Major Pilin Subunit Of
Bacillus Cereus
pdb|3KPT|B Chain B, Crystal Structure Of Bcpa, The Major Pilin Subunit Of
Bacillus Cereus
Length = 355
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 99 YYYFFSSQVRRSVVYGDQPRNRLDLHFPTNND-----GPKPVVVFVTGG 142
++ SQV+ V G + N +HF ND KPVVV T G
Sbjct: 203 FHLQIKSQVKEGVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIPTTG 251
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 49 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 107
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 108 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 152
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 153 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 184
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 49 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 107
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 108 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 152
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 153 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 184
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 63 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 122 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 166
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 167 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 198
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 47 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 105
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 106 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 150
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 151 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 182
>pdb|3UNW|A Chain A, Crystal Structure Of Human Gac In Complex With Glutamate
pdb|3UNW|B Chain B, Crystal Structure Of Human Gac In Complex With Glutamate
pdb|3UNW|C Chain C, Crystal Structure Of Human Gac In Complex With Glutamate
pdb|3UNW|D Chain D, Crystal Structure Of Human Gac In Complex With Glutamate
pdb|3UO9|A Chain A, Crystal Structure Of Human Gac In Complex With Glutamate
And Bptes
pdb|3UO9|B Chain B, Crystal Structure Of Human Gac In Complex With Glutamate
And Bptes
pdb|3UO9|C Chain C, Crystal Structure Of Human Gac In Complex With Glutamate
And Bptes
pdb|3UO9|D Chain D, Crystal Structure Of Human Gac In Complex With Glutamate
And Bptes
Length = 534
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 247 FGLSGGYNLLNLVDHCHNRGLYRSI----FLSIMEGEESLPVF-------SPAVRIKDPS 295
FG S G L+ ++ +GL S+ F +I EG+E +PV S +R DP
Sbjct: 45 FGNSEGKELVASGENKIKQGLLPSLEDLLFYTIAEGQEKIPVHKFITALKSTGLRTSDPR 104
Query: 296 IRDASSLL 303
+++ +L
Sbjct: 105 LKECMDML 112
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 48 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 106
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 107 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 151
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 152 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 183
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 83 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 141
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 142 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 186
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 187 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 218
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 91 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 149
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 150 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 195 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 64 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 123 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 167
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 168 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 199
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 63 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 122 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 166
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 167 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 198
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 44 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 102
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 103 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 147
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 148 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 179
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 38/162 (23%)
Query: 170 DYRNFPQGTISDM----VKDVSQGISFVFNNIADYGGDPNRIYLMGQSAGAHISSCALLE 225
D+ P GT M +K VS G S V + D+ P+ L+ + +
Sbjct: 44 DWGELPNGTRVPMEVVLLKKVSSGFSGVIR-LLDWFERPDSFVLILERPEPVQDLFDFIT 102
Query: 226 Q--AVKESTGESISWSASHIKYYFGLSGGYNLLNLVDHCHNRG-LYR-----SIFLSIME 277
+ A++E S W +L V HCHN G L+R +I + +
Sbjct: 103 ERGALQEELARSFFW---------------QVLEAVRHCHNCGVLHRDIKDENILIDLNR 147
Query: 278 GEESLPVFSPAVRIKDPSIRDASSLLPPIILFHGTSDYSIPS 319
GE L F +KD D F GT YS P
Sbjct: 148 GELKLIDFGSGALLKDTVYTD----------FDGTRVYSPPE 179
>pdb|3VI3|A Chain A, Crystal Structure Of Alpha5beta1 Integrin Headpiece
(Ligand-Free Form)
pdb|3VI3|C Chain C, Crystal Structure Of Alpha5beta1 Integrin Headpiece
(Ligand-Free Form)
pdb|3VI4|A Chain A, Crystal Structure Of Alpha5beta1 Integrin Headpiece In
Complex With Rgd Peptide
pdb|3VI4|C Chain C, Crystal Structure Of Alpha5beta1 Integrin Headpiece In
Complex With Rgd Peptide
Length = 632
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 332 VGAKPELVLYP--GKSHTDLFLQDPLRGGKD 360
+G+KP VL P SHT F LRGG+D
Sbjct: 394 LGSKPSQVLQPLWAASHTPDFFGSALRGGRD 424
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,906,163
Number of Sequences: 62578
Number of extensions: 553621
Number of successful extensions: 1790
Number of sequences better than 100.0: 150
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1648
Number of HSP's gapped (non-prelim): 155
length of query: 405
length of database: 14,973,337
effective HSP length: 101
effective length of query: 304
effective length of database: 8,652,959
effective search space: 2630499536
effective search space used: 2630499536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)