Your job contains 1 sequence.
>015513
MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG
LTSNHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAM
ENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQ
DLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLKEN
ISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQLCS
CADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVGAVS
KLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTRYQG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015513
(405 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 794 5.4e-79 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 404 1.1e-76 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 428 3.3e-40 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 416 6.1e-39 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 364 2.0e-33 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 362 3.2e-33 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 304 4.5e-27 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 299 1.5e-26 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 299 1.9e-26 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 296 5.1e-26 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 296 1.2e-25 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 270 6.2e-21 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 259 1.1e-19 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 240 2.4e-17 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 236 5.4e-17 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 236 5.7e-17 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 236 5.8e-17 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 227 6.7e-16 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 213 5.9e-15 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 184 6.3e-14 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 188 9.0e-14 2
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 192 1.7e-12 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 197 1.9e-12 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 159 3.5e-12 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 187 1.0e-11 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 186 1.4e-11 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 180 6.0e-11 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 177 2.8e-10 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 169 1.2e-09 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 142 1.6e-09 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 172 1.9e-09 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 168 3.3e-09 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 167 3.6e-09 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 161 6.5e-09 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 162 7.1e-09 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 160 1.2e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 160 1.2e-08 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 162 1.5e-08 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 158 2.0e-08 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 161 2.0e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 158 2.7e-08 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 160 2.8e-08 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 155 4.3e-08 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 158 4.5e-08 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 150 5.9e-08 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 155 8.0e-08 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 151 1.1e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 150 1.3e-07 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 150 1.5e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 150 1.5e-07 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 151 2.2e-07 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 147 7.4e-07 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 145 1.2e-06 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 144 1.6e-06 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 118 1.7e-06 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 141 3.3e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 141 3.5e-06 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 136 1.2e-05 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 91 2.4e-05 2
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 122 5.3e-05 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 123 5.8e-05 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 103 6.4e-05 2
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 122 9.2e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 125 0.00010 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 118 0.00012 1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 125 0.00012 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 120 0.00016 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 118 0.00024 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 118 0.00024 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 118 0.00024 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 118 0.00024 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 118 0.00024 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 124 0.00026 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 118 0.00035 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 114 0.00051 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 111 0.00065 3
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 169/410 (41%), Positives = 254/410 (61%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
+EIE+P +F+CPISL+IMKDPV TGI+YDR+SIEKWL K +CPVTKQ + D+ L
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDIT-DADL 66
Query: 62 TSNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHL-RISTLKKMEA 117
T NHTLRRLIQ+WCT N G++RIPTP+ + K ++ KL+RD S H ++ LK++
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 126
Query: 118 LAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDH 177
+ EN N++ LE A V L + + T +EAL +L + + K L+++
Sbjct: 127 IVSENATNKRCLEAAGVPEFLANIVSNDSENGSLT--DEALNLLYHLETSETVLKNLLNN 184
Query: 178 H-NQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKL 236
+ +++ +L ++Q + V A ++LK +LE+A + TL + F E+V++
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRVY----ATLLLKNILEVADP-MQSMTLKPEVFTEVVQI 239
Query: 237 LKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIEL---ELTKPEKSTTELIFN 293
L + ISQ+ATK+ +H+L+ CP G NR K EA + +IEL E E+ E+
Sbjct: 240 LDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMV 299
Query: 294 LLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEM 353
+L LC CA+GR +F H AIA+V K++LRVS +DRAV +L S+ +F AT ++ EM
Sbjct: 300 VLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEM 359
Query: 354 LSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTRY 403
L +G V+KLC+V Q C K++AKE+L+LH+ VW +SPC+ ++ Y
Sbjct: 360 LQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAY 409
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 404 (147.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 90/255 (35%), Positives = 150/255 (58%)
Query: 154 LEEALRILSLVWSPSNENKALVDHHN-QDLIGALMWVLQWENNDRHV-AVKTSAMIVLKM 211
++EAL +L + + K+L+++ +L+ L ++Q R + + A ++LK
Sbjct: 185 MDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQ-----RGIYESRAYAALLLKK 239
Query: 212 VLELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANA 271
+LE+A + L + F E++++L + IS +AT+S + +L+ CP G NR K E
Sbjct: 240 LLEVADPMQI-ILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGT 298
Query: 272 VFELIEL---ELTKPEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPA 328
+ +IEL + E+ +E+ +L LC CA+GR +F H AIA+V+K++LRVS
Sbjct: 299 ISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQI 358
Query: 329 TNDRAVHILSSISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNV 388
T++RAV +L S+ +F AT ++ EML +G V+KLC+V Q C K++AKE+L+LH+ V
Sbjct: 359 TSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARV 418
Query: 389 WNNSPCIQVYLLTRY 403
W SPC+ L Y
Sbjct: 419 WRESPCVPRNLYDSY 433
Score = 387 (141.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 78/150 (52%), Positives = 103/150 (68%)
Query: 1 MD-EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDS 59
MD EIE+P +F+CPISL IMKDPV TGI+YDRESIEKWL + K +CPVTKQ + ++
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT-ET 59
Query: 60 GLTSNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHL-RISTLKKM 115
LT NHTLRRLIQ+WCT N GI+RIPTPK + K ++ KL+++ S HL ++ LK++
Sbjct: 60 DLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 116 EALAMENERNRKSLEEAFVVRALVLFIITS 145
+ EN N++ LE A V L + S
Sbjct: 120 RQIVSENTTNKRCLEAAEVPEFLANIVSNS 149
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 118/400 (29%), Positives = 198/400 (49%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I++P +F CPISL++M+DPVT TG +YDR SIE W+ +TTCPVT+ PL D L
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS-DFTLIP 70
Query: 64 NHTLRRLIQAWCT---HNGIDRIPTPKSALNKDQVRKLVRDLDS--G-HL----RISTLK 113
NHTLRRLIQ WC NG++RIPTPK + VR L+ + G H+ R + L+
Sbjct: 71 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALR 130
Query: 114 KMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKA 173
++ A ++++NR + L+ + + ++ AL ++ + P+
Sbjct: 131 RLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSI 190
Query: 174 LVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLE-LASKGLLESTLNLD-FFK 231
D + + L++ D + + +A ++++V S L S N + F+
Sbjct: 191 SSDPGRVEFLTRLLF-------DSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 232 EMVKLLKENIS-QQATKSGLHVLLQACPMGGNR-VKITEANAVFELIELELTKPEKSTTE 289
++ LL+ IS ++A K G+ L C + R + IT A A LI+ ++ TE
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAIT-AGAPEILIDRLAADFDRCDTE 302
Query: 290 LIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEV 349
+ LC +G F EHA + ++ K +LRVS + A L ++ +
Sbjct: 303 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWRE 362
Query: 350 VLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVW 389
E G V +L ++ Q++C + K +A+++L+L + W
Sbjct: 363 --EAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 123/401 (30%), Positives = 204/401 (50%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I++P +F CPISL +M DPVT TG +YDR SI+ W+ +TTCPVT+ L D L
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVALS-DFTLIP 69
Query: 64 NHTLRRLIQAWCT---HNGIDRIPTPKSALNKDQVRKLVRDLDS--G-HL----RISTLK 113
NHTLRRLIQ WC NG++RIPTPK + VR L+ + G H+ R + ++
Sbjct: 70 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIR 129
Query: 114 KMEALAMENERNRKSL--EEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNEN 171
++ LA ++E+NR + A + +LF + + E+L +L L+ E
Sbjct: 130 RLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETEC 189
Query: 172 KALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLN-LD-F 229
+A+ ++ +G + +L D + ++ +A +++MVL A L+ ++ D
Sbjct: 190 EAVASDPSR--VGFMTRLLF----DSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSI 243
Query: 230 FKEMVKLLKENIS-QQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTT 288
F+ ++ LLK IS ++A K G+ + C + R A A LI+ ++ T
Sbjct: 244 FEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDT 303
Query: 289 ELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYE 348
E + LC +G F EHA + ++ K +LRVS + A L ++ +A
Sbjct: 304 ERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAEER 361
Query: 349 VVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVW 389
E + G V++L ++ Q+DC + K +A+ +L+L + W
Sbjct: 362 CRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 402
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 113/407 (27%), Positives = 199/407 (48%)
Query: 3 EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLT 62
EI +P F CPIS+ +MKDPV TGI+YDR SIE W+ + + TCPVT L +
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSG-NKTCPVTNTVLTTFDQIP 86
Query: 63 SNHTLRRLIQAWCTHNG---IDRIPTPKSALNKDQVRKLVRDLDSGHLRIS------TLK 113
NHT+R++IQ WC G I RIPTP+ L +V ++ R L S R ++
Sbjct: 87 -NHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIE 145
Query: 114 KMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNK--TTGLEEALRILSLVWSPSNEN 171
K++ L E+E+NRK + E V L + G++ T L E L +L+ ++ E
Sbjct: 146 KIKKLGDESEKNRKCVNENSVGWVLC-DCFDKFSGDEKLTFMLNEILSLLTWMFPIGLEG 204
Query: 172 -KALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFF 230
L + + L+ ++ D +V+ +A ++K +L L + +
Sbjct: 205 ISKLASATSFRCVAGLL-----KSTDD--SVRQNAAFIMKEILSLDETRVHSFAVENGVA 257
Query: 231 KEMVKLLKENISQQATKSGLHVLLQACPMGGNRV-KITEANAVFELIELELTKPEKSTTE 289
+ +VKL+++++S +TKS L + Q + E V +E+ + E S E
Sbjct: 258 EALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEM-IVDAENSVCE 316
Query: 290 LIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEV 349
+L +C GR + R++A + ++ K++ +VS ++ ++ + K T V
Sbjct: 317 KALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAV 376
Query: 350 VLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL-HSNVWNNSPCI 395
+ + +GA K+ +V Q + K++A E+L++ ++ + S C+
Sbjct: 377 E-DAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCV 422
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 115/398 (28%), Positives = 196/398 (49%)
Query: 3 EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLT 62
EI +P F CPIS ++MKDPV +GI+YDRE+IEKW ++ T CPVT L +
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQT-CPVTNTVLTSLEQIP 88
Query: 63 SNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHLR------ISTLK 113
NHT+RR+IQ WC + GI+RIPTP+ + QV ++ L + R + +
Sbjct: 89 -NHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 114 KMEALAMENERNRKSLEEAFVVRAL-VLFIITSYKGNKTTGLEEALRILSLVWSPSNENK 172
KM L E+ERNRK ++E L V F S N + LEE + +L+ + E +
Sbjct: 148 KMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQ 207
Query: 173 ALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKE 232
+ + + L+ +L+ N D++ A ++K +LEL + + + ++ +E
Sbjct: 208 SKLTTTSS--FNRLVELLR--NGDQNAA------FLIKELLEL-NVTHVHALTKINGVQE 256
Query: 233 --MVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTEL 290
M + +++ + S H++L +++ N E+ L E S E
Sbjct: 257 AFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEM----LVDSENSVCEK 312
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVV 350
+L +C +GR K R + I ++ K++L++S + V ++ + K EV
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDGSEVE 370
Query: 351 LEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNV 388
E L +GA KL ++ Q C + K++ E+L++ + V
Sbjct: 371 -EALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKV 407
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 111/399 (27%), Positives = 191/399 (47%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP +F CPISL +M+ PV+ TG++YDR SI++WL +T CP T Q L +
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNT-CPATMQLL-KTKDFVP 67
Query: 64 NHTLRRLIQAWCT-----HNGIDRIPTPKSALN---KDQVRKLVRDLDSGHLRISTLKKM 115
N TL+RLI W HNG + P S K++V L+ L S + L K+
Sbjct: 68 NLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS----LENLMKI 123
Query: 116 EALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRIL-SLVWSPSNENKAL 174
+++ NR+ L + +++ II + K K + A+RIL S+ + +
Sbjct: 124 VRFVKDSDSNREFLSKKMEFVPMLVDIIRTKK-TKIELVIMAIRILDSIKVDRERLSNLM 182
Query: 175 VDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMV 234
+ + D + A++ +Q N + K ++ VL + A L+ + + EM+
Sbjct: 183 LANDGGDCLTAILLAIQRGNLES----KIESVRVLDWISFDAKSKLMIAERD-GVLTEMM 237
Query: 235 KLLK--ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKP--EKSTTEL 290
K + E+ ++ L L+ R K+ A A+ ++ ++ LT+ + TE
Sbjct: 238 KSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEK 297
Query: 291 IFNLLAQLCSCADGRLKF--REHAGAIAMVTKRLLRVSPATNDRAVHIL---SSISKFSA 345
LL L S +GRL+ ++ + V K+LL+VS + AV IL + +
Sbjct: 298 SLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDK 357
Query: 346 TYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
T E +E S G V+KL +V Q++C ++ AK+++++
Sbjct: 358 TVEETVER-SNG-VTKLLVVIQSNCSAMVRQMAKDLIKV 394
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 100/405 (24%), Positives = 196/405 (48%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
VP +F CPISL +MK PV+ TG++YDR SI++WL +T CP T Q L ++ N
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNT-CPATMQIL-QNKEFVPNL 68
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRD-LDSGHLRISTLKKMEALAMENER 124
TL RLI W + I+R +S + R + ++ + K+ A E++
Sbjct: 69 TLHRLIDHWS--DSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDE 126
Query: 125 NRKSL--EEAFVVRALVLFIIT---SYKGNKTTGLEEALRILSLVWSPSNENKALVD--- 176
NR+ L ++ FV A+++ +I+ ++ ++ + EA++ILS++ + + L +
Sbjct: 127 NREFLAGKDDFV--AMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNLIL 184
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMV-LELASKGLLESTLNLDFFKEMVK 235
+ D + + +++ N + +K VL+ + ++ SK ++ L E++K
Sbjct: 185 TNGGDCLTSFFLLIK-RGNPK---LKIDCSAVLEFIAVDAESKLIIAKGEGL--VTEIIK 238
Query: 236 LLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKST--TELIFN 293
L+ + ++ L +L+ ++ + V +L L LT P S TE
Sbjct: 239 LISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSL-LTDPTTSVSVTEKCLK 297
Query: 294 LLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEM 353
LL + SC +GR + + + V +L++VS A + AV +L S+ + +
Sbjct: 298 LLEAISSCKEGRSEICDGV-CVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDAV 356
Query: 354 LSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVY 398
+ + V+K+ ++ Q++C ++ ++L++ N+ C+ VY
Sbjct: 357 IRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKV--NSRSCLSVY 399
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 299 (110.3 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 113/407 (27%), Positives = 193/407 (47%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
+D ++P FICPISL+ M+DPVT TG +Y+R +I KW TCP T Q L D+
Sbjct: 59 LDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGH-LTCPTTMQELWDDT- 116
Query: 61 LTSNHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDS--GHLRISTLKKMEAL 118
+T N TL LI W + + + +S + + +++ L G R+ L +++ +
Sbjct: 117 VTPNKTLHHLIYTWFSQKYV--LMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQI 174
Query: 119 AMENERNRKSL-EEAFV-VRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVD 176
+ + RK++ EE V V + +L TS+ G E ++SL S+ L+
Sbjct: 175 VIAHLMARKTVVEEGGVSVISSLLGPFTSH----AVGSEVVAILVSLDLD-SDSKSGLMQ 229
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTS-AMIVLKMVLELASKGLLESTLNLDFFKEMVK 235
LI ++ ND K + A ++ +V E + L S+ +L +++
Sbjct: 230 PAKVSLIVDML-------NDGSNETKINCARLIRGLVEEKGFRAELVSSHSL--LVGLMR 280
Query: 236 LLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLL 295
L+K+ + L +L R + AV +L+++ L + EL +L
Sbjct: 281 LVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDI-LPSLDPECLELALFVL 339
Query: 296 AQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLS 355
LC+ +GR+ ++ A I + L+RVS + A+ IL S+ K A E +
Sbjct: 340 DALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKL-APEECSPLAVE 398
Query: 356 VGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTR 402
VG +KL +V Q+ C+ LK R+ E+L+L S ++++ I LTR
Sbjct: 399 VGLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYSDTMFISKCKLTR 445
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 296 (109.3 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 108/420 (25%), Positives = 199/420 (47%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP +F CPISL +MK PV+ TG++YDR SI++WL +T CP T Q L ++
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNT-CPATMQIL-QNKDFIP 65
Query: 64 NHTLRRLIQAW--------CTHNGIDRIPTPKS---ALNKDQVRKLVRDLDSGHLRISTL 112
N TL+RLI+ W C + PT A+++ ++ K RD D L
Sbjct: 66 NRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERD-DR-----EVL 119
Query: 113 KKMEALAMENERNRKSL--EEAFVVRALVLFI----ITSYKGNKTTGLEEALRILSLVWS 166
K+ E++ NR L ++ FV + LV I + K+ ++EA++ILS + S
Sbjct: 120 SKIVRFGRESDDNRGFLAGKDDFV-KLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRS 178
Query: 167 PSNENKA---LVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMV-LELASKGLLE 222
++ + L+ + +D + ++++ + N V +K +L+ + ++ SK L+
Sbjct: 179 KVSDRRRFSNLILTNGRDRLSVIVYLFKTGN----VELKIDCAGLLEFIAVDAESKLLIA 234
Query: 223 STLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIEL---E 279
L E++K + ++ +S L L+ ++ + + ++ +L
Sbjct: 235 ERDGL--ITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDS 292
Query: 280 LTKPEKSTTELIFNLLAQLCSCADGRLKFREHAG-AIAMVTKRLLRVSPATNDRAVHILS 338
+ S TE LL L S +GR + G + V K+L++VS A + AV +L
Sbjct: 293 TSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLW 352
Query: 339 SISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVY 398
S+S + + + SV V+K+ ++ Q++C ++ ++L++ N+ C+ Y
Sbjct: 353 SVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKV--NSRSCLSAY 410
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 296 (109.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 109/404 (26%), Positives = 193/404 (47%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P FICPISL+ M+DPVT TG +Y+R +I KW TCP T Q L D +T N
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGH-CTCPTTMQEL-WDDLVTPN 116
Query: 65 HTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDS--GHLRISTLKKMEALAMEN 122
TL +LI W + + + +S + + +++ L G ++ L +++ + M +
Sbjct: 117 KTLHQLIYTWFSQKYV--LMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAH 174
Query: 123 ERNRKSLEE---AFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHN 179
+K++ + FV+ +L L TS+ G EA+ IL + S+ L+
Sbjct: 175 AIAKKTVVDEGGVFVISSL-LSPFTSH----AVG-SEAIAILVNLELDSDSKAGLMQPAR 228
Query: 180 QDLIGALMWVLQWENNDRHVAVKTS-AMIVLKMVLELASKGLLESTLNLDFFKEMVKLLK 238
L+ ++ ND + K + A ++ ++V E + L S+ +L +++L+K
Sbjct: 229 VSLMVDML-------NDGSIETKINCARLIGRLVEEKGFRAELVSSHSL--LVGLMRLVK 279
Query: 239 ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQL 298
+ + L +L R + AV +L+++ L + E +L L
Sbjct: 280 DRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDV-LPCLDVECLESALFVLDSL 338
Query: 299 CSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVGA 358
C ++GR+ ++ I + L++VS + A+ IL S+ K A+ E + VG
Sbjct: 339 CLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKL-ASEECSSLAVEVGL 397
Query: 359 VSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTR 402
+KL +V Q+ C+ LK R+ E+L+L S +++S I LTR
Sbjct: 398 AAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDSMFISKCKLTR 441
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 270 (100.1 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 108/389 (27%), Positives = 178/389 (45%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F+CPI+L+IM DPV TG +Y++ESI+KW A TCP T+Q L S L N
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFD-AGHKTCPKTRQELDHLS-LAPNF 347
Query: 66 TLRRLIQAWCTHNGIDRIP----TPKSALN-KDQVRKLVRDLDSGHLRIS--TLKKMEAL 118
L+ LI WC N +IP +P S KD+V LV L S L ++K+M L
Sbjct: 348 ALKNLIMQWCEKNNF-KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 119 AMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHH 178
A EN NR + A + LV + SY + G++E L S NK L+
Sbjct: 407 ARENPENRVLIANAGAIPLLVQLL--SYPDS---GIQENAVTTLLNLSIDEVNKKLIS-- 459
Query: 179 NQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNL-DFFKEMVKLL 237
N+ I ++ +L EN +R ++A + +L+ +K T+ L + +V LL
Sbjct: 460 NEGAIPNIIEIL--ENGNREARENSAAALFSLSMLD-ENK----VTIGLSNGIPPLVDLL 512
Query: 238 KENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQ 297
+ + + K L L N+ + +A V L+ L K E + ++L
Sbjct: 513 QHG-TLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEAL-SILLL 570
Query: 298 LCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVG 357
L S +GR + I + + + + +P + A +L + ++++ +L L G
Sbjct: 571 LASHPEGRQAIGQ-LSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSF--ILAALQFG 627
Query: 358 AVSKLCMVTQADCEKYLKDRAKEILRLHS 386
L +T + + + +A +++L S
Sbjct: 628 VYEYLVEITTSGTNRAQR-KANALIQLIS 655
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 259 (96.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 106/393 (26%), Positives = 172/393 (43%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F CPISL++M+DPV +G +Y+R I+KWL + T CP T+QPL S LT N
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKT-CPKTQQPLSHTS-LTPNF 285
Query: 66 TLRRLIQAWCTHNGIDRIPT-------PKSALNKDQ----VRKLVRDLDSGHL--RISTL 112
L+ LI WC NGI+ +P K+A + D + L+ L SG+ + +
Sbjct: 286 VLKSLISQWCEANGIE-LPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAA 344
Query: 113 KKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENK 172
++ LA N NR + EA + LV + +S + T +L+L S NK
Sbjct: 345 GEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSS---DPRTQEHAVTALLNL--SIHENNK 399
Query: 173 A-LVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFK 231
A +VD H I ++ E + A S +V + + + + G + +NL
Sbjct: 400 ASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINL---- 455
Query: 232 EMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELI 291
L + S + K + C GN+V+ +A V L+ L P +
Sbjct: 456 -----LCDG-SPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNF-LVDPTGGMIDEA 508
Query: 292 FNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVL 351
+LL+ L +G++ + I + + + SP + A IL + SA E L
Sbjct: 509 LSLLSILAGNPEGKIVIAR-SEPIPPLVEVIKTGSPRNRENAAAILWLLC--SADTEQTL 565
Query: 352 EMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
+ G L +++ ++ K +A IL L
Sbjct: 566 AAKAAGVEDALKELSETGTDR-AKRKASSILEL 597
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 240 (89.5 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 95/349 (27%), Positives = 160/349 (45%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I +P F CPISL++MKDPV TG +Y+R IEKW+ + T CP T+Q + S LT
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHT-CPTTQQKMST-SALTP 328
Query: 64 NHTLRRLIQAWCTHNGID--------RIPTPK-SALNKDQVRKLVRDL---DSGHLRIST 111
N+ LR LI WC NG++ PTP S+ + + L+ L D+ R S
Sbjct: 329 NYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQR-SA 387
Query: 112 LKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNEN 171
++ LA N NR + EA + L+L +++S +T E A+ L L S +N
Sbjct: 388 AAELRLLAKRNANNRICIAEAGAI-PLLLSLLSS-SDLRTQ--EHAVTAL-LNLSIHEDN 442
Query: 172 KALVDHHNQDLIGALMWVLQ---WENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLD 228
KA + + + +++ VL+ E + A S ++ + + + G + +
Sbjct: 443 KASII--SSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPA----- 495
Query: 229 FFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTT 288
+V LL E SQ+ K L C GN+ + A V ++ L +T P +
Sbjct: 496 ----LVVLLGEG-SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGL-VTNPTGALM 549
Query: 289 ELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
+ +L+ L S +G+ A + ++ + + +P + A ++
Sbjct: 550 DEAMAILSILSSHPEGKAAIGA-AEPVPVLVEMIGSGTPRNRENAAAVM 597
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 236 (88.1 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 100/393 (25%), Positives = 180/393 (45%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
D++ +P F+CP+SL++MKDPV TG +Y+R I++W+ + TCP T+Q L + L
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCG-NLTCPKTQQKLENFT-L 294
Query: 62 TSNHTLRRLIQAWCTHNGIDRIPT------PKSALNKDQVRKLVRDLDSGHL--RISTLK 113
T N+ LR LI WC + I++ P K++ + +R LV+ L S R + +
Sbjct: 295 TPNYVLRSLISRWCAEHNIEQ-PAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVS 353
Query: 114 KMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALR-ILSLVWSPSNENK 172
++ +L+ + NR + EA + LV ++TS E A+ +L+L S NK
Sbjct: 354 EIRSLSKRSTDNRILIAEAGAIPVLVN-LLTS---EDVATQENAITCVLNL--SIYENNK 407
Query: 173 ALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKE 232
L+ GA+ ++Q A + +A + + L +K ++ +
Sbjct: 408 ELIM-----FAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGS---GAIPA 459
Query: 233 MVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIF 292
+V LL EN + + K L C GN+ + A V L+++ +
Sbjct: 460 LVDLL-ENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEAL 518
Query: 293 NLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATN-DRAVHILSSISKFSATYEVVL 351
+L+ L + D + + A++ +L+ N + A IL S+ K E ++
Sbjct: 519 TILSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAAILLSLCKRDT--EKLI 574
Query: 352 EMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
+ +GAV L +++ E+ K +A +L L
Sbjct: 575 TIGRLGAVVPLMDLSKNGTERG-KRKAISLLEL 606
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 236 (88.1 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 104/399 (26%), Positives = 179/399 (44%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
D + +P+ F+CPISL++MKDP TG +Y+R I++W+ + +CP T+Q L + L
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCG-NLSCPKTQQKLENFT-L 296
Query: 62 TSNHTLRRLIQAWCTHNGIDRIP-------TPKSA-----LNKDQ--VRKLVRDLDSGHL 107
T N+ LR LI WCT + I++ P T S L+ D +R LV L S +
Sbjct: 297 TPNYVLRSLISQWCTKHNIEQ-PGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI 355
Query: 108 --RISTLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVW 165
R + + ++ +L+ + NR + EA + LV ++TS G+ T IL+L
Sbjct: 356 EDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVK-LLTS-DGDTETQENAVTCILNL-- 411
Query: 166 SPSNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTL 225
S NK L+ L GA+ ++ A + +A + + L +K ++ ++
Sbjct: 412 SIYEHNKELIM-----LAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGAS- 465
Query: 226 NLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEK 285
+V LL+ S + K L C GN+ + A V L+++ +
Sbjct: 466 --GAIMALVDLLQYG-SVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSE 522
Query: 286 STTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSA 345
+ +L+ L S + A AI + L + P + A IL + K
Sbjct: 523 RMADEALTILSVLASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDT 581
Query: 346 TYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
E ++ + +GAV L +++ E+ K +A +L L
Sbjct: 582 --EKLISIGRLGAVVPLMELSRDGTER-AKRKANSLLEL 617
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 236 (88.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 93/347 (26%), Positives = 161/347 (46%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P+YF CPISL++MKDPV TG +Y+R SI+KWL A TCP +++ L +GLT N+
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLD-AGHKTCPKSQETLLH-AGLTPNY 305
Query: 66 TLRRLIQAWCTHNGIDRIP-------TPK----SALNKDQ--VRKLVRDLDSG--HLRIS 110
L+ LI WC NGI+ +P T K S+ + D+ V L+ L +G + +
Sbjct: 306 VLKSLIALWCESNGIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRA 364
Query: 111 TLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNE 170
++ LA N NR + EA + LV + + + T +L+L + N+
Sbjct: 365 AAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSP---DPRTQEHSVTALLNLSINEGNK 421
Query: 171 NKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFF 230
A+VD GA+ +++ N A + +A + + + +K + +
Sbjct: 422 G-AIVD------AGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAA---GAI 471
Query: 231 KEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTEL 290
+ ++ LL+E +++ K + C GN+ + + V L L L +
Sbjct: 472 QALISLLEEG-TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRL-LKDAGGGMVDE 529
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
+LA L + +G+ E A +I ++ + + SP + A IL
Sbjct: 530 ALAILAILSTNQEGKTAIAE-AESIPVLVEIIRTGSPRNRENAAAIL 575
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 227 (85.0 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 93/346 (26%), Positives = 151/346 (43%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F CPISL++M+DPV +G +Y+R IEKW++ +TCP T+Q L + LT N+
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGH-STCPKTQQALTSTT-LTPNY 313
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHL-----RI---------ST 111
LR LI WC N I+ P P S+L +V ++ + R+ S
Sbjct: 314 VLRSLIAQWCEANDIEP-PKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSA 372
Query: 112 LKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNEN 171
++ LA N NR ++ EA + LV + T + + AL LS+ N
Sbjct: 373 AGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVT-ALLNLSIC---ENNK 428
Query: 172 KALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFK 231
A+V GA+ ++Q A + +A + + + +K + + L
Sbjct: 429 GAIVS------AGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGA---LGAIP 479
Query: 232 EMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELI 291
+V LL E +Q+ K L C GN+ K A + L L LT+P +
Sbjct: 480 PLVVLLNEG-TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRL-LTEPGSGMVDEA 537
Query: 292 FNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
+LA L S +G+ + A+ + + + SP + A +L
Sbjct: 538 LAILAILSSHPEGKAIIGS-SDAVPSLVEFIRTGSPRNRENAAAVL 582
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 213 (80.0 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 94/361 (26%), Positives = 165/361 (45%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P F CPISL+IM DPV +G ++DR SI++W+ + + TCP+TK PL L N
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSG-NRTCPITKLPLSETPYLIPN 62
Query: 65 HTLRRLIQAWCTHNGIDRIPTPKS----ALNKDQ--VRKLVRDLDSGHLRISTLKKMEAL 118
H LR LI + H + P++ + ++ Q + LV S ++ +L ++ L
Sbjct: 63 HALRSLILNFA-HVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRL 121
Query: 119 AMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHH 178
+ R+ + E+ VRA L + S N+ L+E + LSL+ + S E+ V
Sbjct: 122 TKRDSSIRRKVTESGAVRA-ALDCVDSC--NQV--LQE--KSLSLLLNLSLEDDNKVGLV 174
Query: 179 NQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLK 238
+I ++ VL+ + D T ++ V+E+ +K + S D +V LL+
Sbjct: 175 ADGVIRRIVTVLRVGSPDCKAIAAT--LLTSLAVVEV-NKATIGSYP--DAISALVSLLR 229
Query: 239 ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQL 298
++ +S L C NR ++ + +V L+E S E +L L
Sbjct: 230 VGNDRERKESAT-ALYALCSFPDNRKRVVDCGSVPILVEAA-----DSGLERAVEVLGLL 283
Query: 299 CSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVGA 358
C GR + + +G + ++ L + ++ IL+ + S E+V E+ G
Sbjct: 284 VKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSG--EIVDEVKREGV 341
Query: 359 V 359
V
Sbjct: 342 V 342
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 184 (69.8 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW +T CP T+Q LP S LT N+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNT-CPKTQQQLPHIS-LTPNNC 330
Query: 67 LRRLIQAWCTHNGIDRIPT-PKSALNKDQVRKLVRDLDS 104
++ LI +WC NG +IP+ P + + D R + D +S
Sbjct: 331 VKGLIASWCEQNGT-QIPSGPPESQDLDYWRLALSDSES 368
Score = 73 (30.8 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 47/231 (20%), Positives = 94/231 (40%)
Query: 108 RISTLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEE-ALRILSLVWS 166
+ ++K+ L ++E R + V AL+ F+ ++ N + A+ + +L +
Sbjct: 441 KCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVN 500
Query: 167 PSNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLN 226
+N NK L+ L ++ +L+ + +A+ + L+ A K ++ S+
Sbjct: 501 -NNRNKELM------LTSGVIRLLEKMISSAESHGSATALYLNLSCLDEA-KSVIGSSQA 552
Query: 227 LDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKS 286
+ F +V+LL++ I Q LH L N + +N + L L + E
Sbjct: 553 VPF---LVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENL 609
Query: 287 TTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
E +L L S +G+ + G I+ + L ++AV L
Sbjct: 610 WIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCL 660
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 188 (71.2 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW ++ CP T+Q LP S LT N+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNS-CPKTQQQLPHLS-LTPNYC 333
Query: 67 LRRLIQAWCTHNGIDRIPT-PKSALNKDQVRKLVRDLDS 104
++ LI +WC NGI +PT P +L+ + R + D +S
Sbjct: 334 VKGLIASWCEQNGIT-VPTGPPESLDLNYWRLAMSDSES 371
Score = 67 (28.6 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 57/279 (20%), Positives = 111/279 (39%)
Query: 108 RISTLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEE-ALRILSLVWS 166
+ ++ + L +NE R + V A + F+ ++ N E A+ + +L +
Sbjct: 441 KCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVN 500
Query: 167 PSNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLN 226
+N NK L+ L ++ +L+ + +A+ + LE A K ++ S+
Sbjct: 501 -NNRNKELM------LTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKA-KPVIGSSQA 552
Query: 227 LDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKS 286
+ FF V LL ++ Q LH L N + +N + L L T
Sbjct: 553 VSFF---VNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTG-NHL 608
Query: 287 TTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSAT 346
E +L L S +G+ + G I+ + L ++AV L + S
Sbjct: 609 WIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGS-- 666
Query: 347 YEVVLEM-LSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
E ++M L G + L ++ + +D+++++L L
Sbjct: 667 -ESCIQMVLQEGVIPSLVSISVNGSPRG-RDKSQKLLML 703
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 81/320 (25%), Positives = 144/320 (45%)
Query: 80 IDRIPTPKSALNKDQVRKLVRDLDSGHLR------ISTLKKMEALAMENERNRKSLEEAF 133
I+RI +P+ L ++ R L + R + + K++ L + N+K L +
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 134 VVRALVLFI--ITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDLIGALMWVLQ 191
V AL + + LEE L +LS W P N ++ + + L+ L
Sbjct: 100 SVLALSSCFERFAAARDGHMRLLEEILFVLSS-WLPLNRSEGFNKMGSTASLNCLVRFL- 157
Query: 192 WENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLH 251
N + + +A ++ V+ + + + T + +VK++++++S +TK+ L
Sbjct: 158 ---NGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVSTSSTKASLM 214
Query: 252 VLLQACPMGGNRVKITEANAVFELIEL--EL--TKPEKSTTELIFNLLAQLCSCADGRLK 307
V+ +A + N KITE L+EL E+ EKS E +L C G+
Sbjct: 215 VIYRA--ISSND-KITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKED 271
Query: 308 FREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYE----VVLEMLSVGAVSKLC 363
+A + ++ K++LRVS +V IL + K E +++E L VGA KL
Sbjct: 272 VLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLL 331
Query: 364 MVTQADCEKYLKDRAKEILR 383
++ Q CE K++A E+LR
Sbjct: 332 VLLQVGCEDKTKEKASELLR 351
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 102/401 (25%), Positives = 166/401 (41%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP+ F+CPISL +M DPV TG +YDR SI +W++ TCP T Q L DS +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGH-CTCPKTGQML-MDSRIVP 360
Query: 64 NHTLRRLIQAWCTHNGID---------------RIPTPKSAL--NKDQVRKLVRDLDSGH 106
N L+ LI WCT +GI +PT K+A+ NK V L++ L G
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPNESFASALPT-KAAVEANKATVSILIKYLADGS 419
Query: 107 LRISTL--KKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLV 164
T+ +++ LA + NR + EA + L ++TS N +L+L
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCR-LLTSE--NAIAQENSVTAMLNLS 476
Query: 165 WSPSNENKALVDHHN-QDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLES 223
N+++ + + + ++ L+ L E + A S L V E + +
Sbjct: 477 IYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFS----LSAVHEYKKRIAI-- 530
Query: 224 TLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKP 283
+D E + LL +N + + K + L N ++ E V L+ K
Sbjct: 531 ---VDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGA--LKN 585
Query: 284 EKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKF 343
E E LA L + G + A+A + + +P + AV L + +
Sbjct: 586 E-GVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCR- 643
Query: 344 SATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
S V ++L A++ L K + +A + R+
Sbjct: 644 SGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARV 684
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 159 (61.0 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 31/95 (32%), Positives = 55/95 (57%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRR 69
F CP+SL++M DPV +G +Y++ I++W+ CP T+Q L + L N+T++
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKV-CPKTRQTLTHTT-LIPNYTVKA 294
Query: 70 LIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDS 104
LI WC N + ++P P + + +++ L+ DS
Sbjct: 295 LIANWCETNDV-KLPDPNKSTSLNELSPLLSCTDS 328
Score = 84 (34.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 64/263 (24%), Positives = 108/263 (41%)
Query: 94 QVRKLVRDLDSGHL---RISTLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNK 150
QV+KLV +L S L R +T + + LA N NR + + A+VL + Y +
Sbjct: 545 QVKKLVEELKSSSLDTQRQATAE-LRLLAKHNMDNRIVIGNS---GAIVLLVELLYSTDS 600
Query: 151 TTGLEEALRILSLVWSPSNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLK 210
T +L+L + +N+ KA+ D I L+ VL EN ++A +
Sbjct: 601 ATQENAVTALLNLSINDNNK-KAIAD---AGAIEPLIHVL--ENGSSEAKENSAATLFSL 654
Query: 211 MVLELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEAN 270
V+E + +S +V LL N + + K L N+ I ++
Sbjct: 655 SVIEENKIKIGQSGA----IGPLVDLLG-NGTPRGKKDAATALFNLSIHQENKAMIVQSG 709
Query: 271 AVFELIELELTKPEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATN 330
AV LI+L P + +LA L + +GR + G I ++ + + S
Sbjct: 710 AVRYLIDL--MDPAAGMVDKAVAVLANLATIPEGRNAIGQEGG-IPLLVEVVELGSARGK 766
Query: 331 DRAVHILSSISKFSATY-EVVLE 352
+ A L +S S + +VL+
Sbjct: 767 ENAAAALLQLSTNSGRFCNMVLQ 789
Score = 62 (26.9 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 48/272 (17%), Positives = 114/272 (41%)
Query: 119 AMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHH 178
A NE R+ L E V V ++ K + +A L L+ + +N+ ++ +
Sbjct: 530 APSNE-TRRDLSE---VETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS 585
Query: 179 NQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLK 238
GA++ +++ + + + +L + + +K ++ + + ++ +L
Sbjct: 586 -----GAIVLLVELLYSTDSATQENAVTALLNLSINDNNK---KAIADAGAIEPLIHVL- 636
Query: 239 ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIEL---ELTKPEKSTTELIFNLL 295
EN S +A ++ L + N++KI ++ A+ L++L + +K +FNL
Sbjct: 637 ENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNL- 695
Query: 296 AQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLS 355
S +GA+ + L+ + D+AV +L++++ + +
Sbjct: 696 ----SIHQENKAMIVQSGAVRYLID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQE-- 748
Query: 356 VGAVSKLCMVTQADCEKYLKDRAKEILRLHSN 387
G + L V + + ++ A +L+L +N
Sbjct: 749 -GGIPLLVEVVELGSARGKENAAAALLQLSTN 779
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 76/270 (28%), Positives = 124/270 (45%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+EVP+ F C +S IM DPV +G +Y++ I +WL D TCP KQ L R LT
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN--HDLTCPTAKQVLYRVC-LTP 128
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRD-LDSGHLRIST-----LKKMEA 117
NH + LI WC N DR P PK + + D V +L D ++S RIS+ + EA
Sbjct: 129 NHLINELITRWCLANKYDR-PAPKPS-DIDYVTELFTDGIESLLQRISSPSSSVADQTEA 186
Query: 118 ---LAMENER--N-R----KSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSP 167
LA++ E+ N R K L ++ + R L + + + L+E + S
Sbjct: 187 AKELALQTEKFVNVRDFFIKELPDS-ITRLLTPLSVLGDEVDSNPELQENIVTALFNMST 245
Query: 168 SNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNL 227
+NK ++ ++Q ++ +L V + +A + L + ++ S ++ N
Sbjct: 246 FEKNKTVLAENHQ-----VIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIG--NS 298
Query: 228 DFFKEMVKLLKENISQQATKSGLHVLLQAC 257
K ++ L+ E AT L ++ C
Sbjct: 299 VALKALIDLIGELDDLSATHDALCAVIDLC 328
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 75/284 (26%), Positives = 134/284 (47%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
++ + P+ F CP+S ++M+DPV +G +YD+ I+KWL + + TCP T+Q LP +
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSG-NRTCPKTQQVLPH-TA 126
Query: 61 LTSNHTLRRLIQAWCTHNGID-RIPTPKSALNKDQ-VRKLVRDLDSGHL-RIST--LKKM 115
LT N +R +I WC NG++ + + +N+D+ V + R++ + L ++S+ L+
Sbjct: 127 LTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQ 186
Query: 116 EALAMENER-NRKSLE-EAFVVRA---LVLFIITSYKG-NKTTGLEE-ALRILSLVWSPS 168
++ A E RK E A + + + G N L+E + L +
Sbjct: 187 KSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHD 246
Query: 169 NENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLD 228
+ NK LV N ++I L+ L+ VA +++A + + L S +L +
Sbjct: 247 DSNKKLVCE-NPNVIPLLIDALRRGT----VATRSNAAAAIFTLSALDSNKVLIGKSGI- 300
Query: 229 FFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAV 272
K ++ LL+E + A K + C NR + AV
Sbjct: 301 -LKPLIDLLEEG-NPLAIKDVAAAIFTLCIAHENRSRAVRDGAV 342
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 180 (68.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 97/364 (26%), Positives = 169/364 (46%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+EVP+ FIC +S +IM +P+ +G ++++ I +WLK + TCP TKQ L +
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK--HERTCPRTKQVLYHRF-MIP 119
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVR-DLDSGHLRISTLKKME------ 116
NH + +I+ WC + DR PK++ D+V L DL+S RIS+ +E
Sbjct: 120 NHLINEVIKEWCLIHNFDR---PKTS---DEVIDLFTGDLESLLQRISSPSSVEDQTEAA 173
Query: 117 -ALAMENERNRKSLEEAFVVRA--LVLFIITSYKGNKTTGLEEALRILSL--VWSPSNEN 171
LA++ +R S+ FV + + ++T ++ + E I++ ++S S +N
Sbjct: 174 KELALKAKRF-SSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKN 232
Query: 172 KALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFK 231
K LV + L+ L+ ++ + SA V + ++K ++ N + K
Sbjct: 233 KTLVAEN--PLVLPLL--AKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIG---NSEVLK 285
Query: 232 EMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFE-LIELELTKPEK-STTE 289
++ +++E S AT L CP VK AV E LI + K + S
Sbjct: 286 ALIHVIEEGDSL-ATSEAFSALSNLCP-----VKEISEKAVSEGLIRAAIKKIKAGSNVS 339
Query: 290 LIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDR-AVHILSSISK-FSATY 347
++ +LLA + + + ++ G I + L + ND AV I+ +I K + A
Sbjct: 340 MLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQ 399
Query: 348 EVVL 351
VVL
Sbjct: 400 NVVL 403
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/155 (32%), Positives = 76/155 (49%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
+ + +P F CPI+L++M+DPV TG +YDRESI+ W+++ +T CP T Q L S
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNT-CPKTGQVLKHTS- 326
Query: 61 LTSNHTLRRLIQAWCTHNGID-RI-------PTP-KSALN--KDQVRKLVRDLDSGHLRI 109
L N L+ LI WC I + P P K A+ K V L+ L
Sbjct: 327 LVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSN- 385
Query: 110 STLKKMEALAMENERNRKSLEEAFVVRALVLFIIT 144
+ ++ ALA + R + EA + LV ++ T
Sbjct: 386 GVVFELRALAKSDTVARACIAEAGAIPKLVRYLAT 420
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P F+CPI+ +IMKDPV A G SY+RE+IE W+ T K+ T P+T PL + + LT N T
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-KNRTSPMTNLPL-QTTLLTPNRT 475
Query: 67 LRRLIQAWCT 76
L+ I W T
Sbjct: 476 LKMAIFRWST 485
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 142 (55.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P+ F C +S +M DPV +G +++R I+KW D+ CP++K+ L D L N
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDS-CPISKRKLD-DFTLKPNV 276
Query: 66 TLRRLIQAWCTHNGID 81
L+ I WC NG+D
Sbjct: 277 ELKSQISEWCAKNGLD 292
Score = 75 (31.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 229 FFKEMVKLLKENISQQAT-----KSGLHVLLQACPMGGNRVKITEANA-VFELIELELTK 282
F + ++ LK + + T K GL +LL + GNR I VF++ + L
Sbjct: 418 FLEPLITYLKNALERNGTAGEIIKGGLDLLLAF--LSGNRRAIESLEEEVFKMFSVFLES 475
Query: 283 PEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISK 342
+ E N+L L + G K +G+++ + K + + ++A+ L ++S
Sbjct: 476 --EVVAEEALNILEVLSNHPHGPSKITS-SGSLSSLLKIVESQAEHLQEQAMITLKNLS- 531
Query: 343 FSATYEVVLEMLSVGAVSKLCMVTQ 367
++ E+ LEM+S+ + KL Q
Sbjct: 532 --SSMEICLEMVSLDFIQKLTSFLQ 554
Score = 62 (26.9 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 294 LLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEM 353
+L LCS GR E +A + + L P + A+ IL + Y ++
Sbjct: 565 ILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVR 624
Query: 354 LSVGAVSKLCMVTQADCEKYLKDRAKEILR 383
+ S L +++ E+ +K A E+LR
Sbjct: 625 EATDIYSSLILISNNGTEE-VKVSASELLR 653
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 172 (65.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
VP+ F CPISL +M+DPV A TG +YDR SI +W++ +TCP + Q L D L N
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGH-STCPNSGQTLA-DHRLVPNR 354
Query: 66 TLRRLIQAWCTHNGIDRIPTPKS 88
LR LI WC G+ + +P+S
Sbjct: 355 ALRSLISQWCGVYGL-QYDSPES 376
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 270 NAVFELIELELTKPEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKR 321
+AV L L T PE S L + L E AGA+A++ K+
Sbjct: 545 DAVMALFNLS-THPESSARMLESCAVVALIQSLRNDTVSEEAAGALALLMKQ 595
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/86 (25%), Positives = 39/86 (45%)
Query: 200 AVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPM 259
A K +A I+++M LE S+ + KE+ L K +A + L + C +
Sbjct: 396 ANKATARILVRM-LEDGSENVKAVAA-----KEIRLLAKTGKQNRAFIADLGAIPLLCRL 449
Query: 260 GGNRVKITEANAVFELIELELTKPEK 285
+ + + NAV L+ L + +P K
Sbjct: 450 LLSNDWMAQENAVTALLNLSIFEPNK 475
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 47/157 (29%), Positives = 83/157 (52%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW +T CP T Q L LT N+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNT-CPKTHQQLSHLC-LTPNYC 337
Query: 67 LRRLIQAWCTHNGIDRIPT-PKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENERN 125
++ LI +WC NG+ ++P P +L+ + R + +S R + K++ + +++ +
Sbjct: 338 VKALISSWCEQNGV-QVPDGPPESLDLNYWRLALSVSESTDTR--SAKRVGSCKLKDVKV 394
Query: 126 RKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILS 162
LEE+ ++ + Y+ ++ T +E +L+
Sbjct: 395 -VPLEESGTIKEEACE--SEYQEDQVTLVERCTELLT 428
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 86/352 (24%), Positives = 156/352 (44%)
Query: 12 CPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRRLI 71
CPISL+IM DPV +G +YDR SI KW + + TCP T + L + L N +++++I
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASG-NITCPKTGKTLV-STVLVDNFSVKQVI 341
Query: 72 QAWCTHNGI-------DRIPTPKSALNKDQVRKLVRDLDSGHL-------RISTLKKMEA 117
Q++ NG+ ++ +S L ++ KL + +G L + L ++
Sbjct: 342 QSYSKQNGVVMGQKGKKKVDVAES-LAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRI 400
Query: 118 LAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALR-ILSLVWSPSNENKALVD 176
L + R L EA VV +L+ + + + E A+ I++L + + + +
Sbjct: 401 LTKTSTFYRSCLVEAGVVESLMKIL----RSDDPRIQENAMAGIMNLSKDIAGKTRIV-- 454
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKL 236
+D G L +++ N+ + A L + L L ++ D +V++
Sbjct: 455 --GEDG-GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEIS-DAIPGLVRI 510
Query: 237 LKE-NISQQATKSGLHVLLQACPMG--GNRVKITEANAVFELIELELTKPEK---STTEL 290
+K + A ++ L + +++ M N +I A V L L+L K E+ T
Sbjct: 511 VKSCDYGDSAKRNAL-IAIRSLLMNQPDNHWRILAAGIVPVL--LDLVKSEEISDGVTAD 567
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRL--LRVSPATNDRAVHILSSI 340
+LA++ DG + G + + K L VSPAT V +L ++
Sbjct: 568 SMAILAKMAEYPDGMISVLRRGG-LKLAVKILGSSEVSPATKQHCVALLLNL 618
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 161 (61.7 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 33/70 (47%), Positives = 43/70 (61%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E PQYFICPISL++MKDP A G +Y+ E+I WL+ +T+ P+T L + L N
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETS-PMTNTKL-HHTKLVPN 381
Query: 65 HTLRRLIQAW 74
LR IQ W
Sbjct: 382 LALRSAIQEW 391
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 162 (62.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 1 MDEIE--VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRD 58
MD + +P FICPI+ ++MKDPV A G SY+RE++E W+ K T+ P+T LP
Sbjct: 395 MDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS-PMTNLALP-S 452
Query: 59 SGLTSNHTLRRLIQAWC-TH 77
LT N TL+ I W TH
Sbjct: 453 LVLTPNRTLKMAINRWLETH 472
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P FICPI+ ++MKDPV A G SY++E++E W+ K T+ P+T LP + LT N
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTS-PMTNLVLP-SAVLTPNR 461
Query: 66 TLRRLIQAWC-TH 77
TL+ I W TH
Sbjct: 462 TLKMAINRWLETH 474
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P FICPI+ ++MKDPV A G SY+RE++E W+ K T+ P+T LP LT N
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS-PMTNLALP-SLVLTPNR 461
Query: 66 TLRRLIQAWC-TH 77
TL+ I W TH
Sbjct: 462 TLKMAINRWLETH 474
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/278 (23%), Positives = 119/278 (42%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I +P YF CP+S ++M DPV +G ++DR SI+KWL CP T+Q L L
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGL-AVCPRTRQVLTHQE-LIP 293
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENE 123
N+T++ +I +W N I+ + + ++ S + + +L +
Sbjct: 294 NYTVKAMIASWLEANRINLATNSCHQYDGGDASSMANNMGSQDFNRTESFRF-SLRSSSL 352
Query: 124 RNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDLI 183
+R SLE L + + S G + + L I L+ SP H + +
Sbjct: 353 TSRSSLETGNGFEKLKINVSASLCGESQS---KDLEIFELL-SPGQS----YTHSRSESV 404
Query: 184 GALMWVLQWENNDRHVAVKTSAMIVL-KMVLELASKGLLESTLNLDFFKEMVKLLK---E 239
+++ + + + H +T +++ + E++ K LES+ N++ K +
Sbjct: 405 CSVVSSVDYVPSVTH---ETESILGNHQSSSEMSPKKNLESSNNVNHEHSAAKTYECSVH 461
Query: 240 NISQQATKSGLHV--LLQACPMGGNRVKITEANAVFEL 275
++ T + H L++ G N+VK A + L
Sbjct: 462 DLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHL 499
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 72/290 (24%), Positives = 128/290 (44%)
Query: 97 KLVRDLDSGHLRISTLKKMEA--LAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGL 154
KLV DL SG ++ T E L + + NR + + L+ + Y K T
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLL---YSEEKLTQE 532
Query: 155 EEALRILSLVWSPSNENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKM-VL 213
+L+L S S NKA++ I L+ VL NDR A + SA + + VL
Sbjct: 533 HAVTALLNL--SISELNKAMIVEVGA--IEPLVHVLN-TGNDR--AKENSAASLFSLSVL 585
Query: 214 ELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVF 273
++ + + +S + + +V LL + + + K L N+ +I +A AV
Sbjct: 586 QVNRERIGQSNAAI---QALVNLLGKG-TFRGKKDAASALFNLSITHDNKARIVQAKAVK 641
Query: 274 ELIELELTKPEKSTTELIFNLLAQLCSCADGRLKF-REHAGAIAMVTKRLLRVSPATNDR 332
L+EL P+ + LLA L + +GR RE G I ++ + + S +
Sbjct: 642 YLVEL--LDPDLEMVDKAVALLANLSAVGEGRQAIVRE--GGIPLLVETVDLGSQRGKEN 697
Query: 333 AVHILSSISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEIL 382
A +L + S + ++ L GA+ L ++Q+ ++ K++A+++L
Sbjct: 698 AASVLLQLCLNSPKFCTLV--LQEGAIPPLVALSQSGTQR-AKEKAQQLL 744
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+ VP F+CPI+ ++MKDPV A G SY++E++E W+ + ++ P+T PLP LT
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSS-PMTNLPLP-SLVLTP 459
Query: 64 NHTLRRLIQAW 74
N TL+ I W
Sbjct: 460 NRTLKMAISRW 470
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P ++ CPI +IM+DP A G +Y+R++I++W++ +D + PVTK L + S LT NHT
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVS-PVTKHRL-KHSDLTPNHT 766
Query: 67 LRRLIQAWCTHNGID 81
LR I+ W + + +D
Sbjct: 767 LRSAIREWRSRSRLD 781
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P YFICPIS ++M++P A G +Y+ ES+ +WL +T+ P+T L ++ L NH
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETS-PMTNLKLAHNN-LVPNHA 555
Query: 67 LRRLIQAWCTHN 78
LR IQ W N
Sbjct: 556 LRSAIQEWLQRN 567
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 160 (61.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P YFICPI ++M+DP A G +Y+ E+I WL + DT+ P+T L S L +NH
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTS-PMTNVKLSHTS-LIANHA 821
Query: 67 LRRLIQAWCTHN 78
LR IQ W H+
Sbjct: 822 LRSAIQEWLQHH 833
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F+CPI+ ++MKDPV A G SY++E++E W+ K T+ P+T LP LT N
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTS-PMTNLILP-SMVLTPNR 461
Query: 66 TLRRLIQAWC-TH 77
TL+ I W TH
Sbjct: 462 TLKMAISRWLETH 474
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 158 (60.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDT----TCPVTKQPLPRDSGLTSNH 65
FICP++ ++M DPVT G +++RE+IEKW K +D+ +CP+T Q L + ++++
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELT-STDVSASI 85
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENERN 125
LR I+ W + N ++ + +L D+ + L + + N
Sbjct: 86 ALRNTIEEWRSRNDAAKLDIARQSLFLGNAET---DI------LQALMHVRQICRTIRSN 136
Query: 126 RKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDLIGA 185
R + + L+ II K +AL+ L +V +E+KA+V D +
Sbjct: 137 RHGVRNS----QLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEG--DTVRT 190
Query: 186 LMWVLQWE-NNDRHVAV 201
L+ L E + R AV
Sbjct: 191 LVKFLSHEPSKGREAAV 207
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 150 (57.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRR 69
F CPIS++IM+DP A G +Y+ E KWL++ T+ P T +PL + L NHTLR
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTS-PKTNKPL-ENHNLVPNHTLRI 294
Query: 70 LIQAWCTHN 78
+I+ W N
Sbjct: 295 IIKDWLEKN 303
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 40/162 (24%), Positives = 77/162 (47%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+ VP F C +SL++M DPV +G +++R I+KW+ CP T+Q L + LT
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGL-MVCPKTRQALSHTT-LTP 295
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENE 123
N +R + +WC N + P P ++ + L+ ++S +R S+ + + +++ E
Sbjct: 296 NFIVRAFLASWCETNNVYP-PDPLELIHSSEPFPLL--VES--VRASSSENGHSESLDAE 350
Query: 124 RNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVW 165
R+ + +V ++ K N + +L + W
Sbjct: 351 ELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPW 392
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 86/348 (24%), Positives = 152/348 (43%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+EVP+ FIC +S IM +PV +G +Y++ I +WLK + TCP TKQ L +
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK--HERTCPKTKQVLSHRLWIP- 126
Query: 64 NHTLRRLIQAWCTHNGID-RIPTPK--SALNKDQVRKLVRDLDSGHLRISTLKKMEALAM 120
NH + LI WC N D + P+ + + L + L++ + S S ++EA A
Sbjct: 127 NHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSS---SVADQIEA-AK 182
Query: 121 ENERNRKSLEEA--FVVRAL------VLFIITSYKGNKTTGLEEALRILSLVWSPS--NE 170
E K F V + +L +++ + LE I++ +++ S
Sbjct: 183 ELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILES 242
Query: 171 NKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFF 230
NK ++ N +I L L+ + D + +A L + + S ++ N +
Sbjct: 243 NKTVIAE-NCLVIPLLTKSLK-QGTDE---TRRNAAATLSSLSAIDSNKIIIG--NSEAV 295
Query: 231 KEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTEL 290
K ++ L++E ATK + C + N+ K+ A + + K + EL
Sbjct: 296 KALIDLIEEG-DLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKK--IKAGSNVDEL 352
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPA-TNDRAVHIL 337
+ +LLA L S + ++ + G I + L + S T + AV I+
Sbjct: 353 L-SLLA-LISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIV 398
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E PQYFICPI+ IM+DP A G +Y+ E+I +W + +T+ P+ + LP S L N
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS-PMINKRLPHTS-LVPN 409
Query: 65 HTLRRLIQAW 74
LR IQ W
Sbjct: 410 LALRSAIQEW 419
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P FICPI+ ++MKDP+ A G SY++E++E W+ K T+ P+T L LT N
Sbjct: 402 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTS-PMTNLVLSSVI-LTPN 459
Query: 65 HTLRRLIQAWC--TH 77
TL+ I W TH
Sbjct: 460 RTLKMAIDRWLSETH 474
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P FICPI+ ++MKDP+ A G SY++E++E W+ K T+ P+T L LT N
Sbjct: 403 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTS-PMTNLVLSSVI-LTPN 460
Query: 65 HTLRRLIQAWC--TH 77
TL+ I W TH
Sbjct: 461 RTLKMAIDRWLSETH 475
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 11 ICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRRL 70
+CPISL+IM DPV TG +YDR SI KW + + TCP+T + L + L N ++R++
Sbjct: 293 LCPISLEIMTDPVVIETGHTYDRSSITKWFGSG-NITCPITGKILT-STELVDNVSVRQV 350
Query: 71 IQAWCTHNGI 80
I+ C NGI
Sbjct: 351 IRKHCKTNGI 360
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 147 (56.8 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P +F CP+ +MK+P A G +YDR +IE+W++ + T PVT PL ++ L NHT
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHR--TSPVTNSPL-QNVNLLPNHT 806
Query: 67 LRRLIQAWCTHN 78
L I W N
Sbjct: 807 LYAAIVEWRNRN 818
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P +++CPI ++MKDP+ A G +Y+ E+I +WL DT+ P+T + D L NH
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTS-PMTNLKM-EDCNLIPNHA 793
Query: 67 LRRLIQAW 74
L IQ W
Sbjct: 794 LHLAIQDW 801
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 65/247 (26%), Positives = 110/247 (44%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDT----TCPVTKQPLPRDSGLTSNH 65
FICP++ Q+M +PVT G +++RE+IEKW + ++ +CP+T + L + L+ +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSI-TDLSPSI 87
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENERN 125
LR I+ W N AL D R+ L G+ + L ++ + E RN
Sbjct: 88 ALRNTIEEWRARN---------DALKLDIARQ---SLYLGNAETNILLALKNVR-EICRN 134
Query: 126 RKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDLIGA 185
+ + + LV I K + +AL+ L +V E+KA+V D +
Sbjct: 135 IRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEG--DTVRT 192
Query: 186 LMWVLQWE-NNDRHVAVKTSAMIVLKMVLELASK-GLLESTLNLDFFKEMVKLLKENIS- 242
++ L E + R AV S + L L K G + + L + EN+S
Sbjct: 193 IVKFLSQEPSKGREAAV--SVLFELSKSEALCEKIGSIHGAIIL--LVGLTSSKSENVST 248
Query: 243 -QQATKS 248
++A K+
Sbjct: 249 VEKADKT 255
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 80 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 137
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 138 LAMKEVIDAFISENG 152
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+ P ++ CPI +IM++P A G +Y+R++I WL+ K PVT+Q L LT
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLE--KHNISPVTRQKLDHFK-LTP 779
Query: 64 NHTLRRLIQAW 74
NHTLR I+ W
Sbjct: 780 NHTLRSAIRDW 790
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P +FICP+ +M +P A G +YDR +IE+WLK + T P+T PL L N+T
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK--EHNTSPMTDSPL-HSKNLLPNYT 823
Query: 67 LRRLIQAW 74
L I W
Sbjct: 824 LYTAIMEW 831
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P +F CPI+ +M++P A G +Y++ +I++WL+ K+ P+T P P DS L NH+
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQ--KNHKSPMTDLPFPSDS-LLPNHS 782
Query: 67 LRRLIQAW 74
L I+ W
Sbjct: 783 LLSAIKEW 790
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 91 (37.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEK-----WLKTAKDTTCPVTKQPLPRDS 59
E P F+CPI+ +M DPV +G +++R S++ ++ D T P +P
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIP--- 86
Query: 60 GLTSNHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLD 103
N ++ I +WC +D P P A + V + D D
Sbjct: 87 ----NLAMKSTIFSWCDRQKVDH-PRPPDAAYVEGVVRARMDKD 125
Score = 86 (35.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/154 (22%), Positives = 72/154 (46%)
Query: 233 MVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIF 292
++ L+ + S++A + L + NR ++ A AV L L + + ST+ ++
Sbjct: 363 LLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTL--LSMVRSGDSTSRILL 420
Query: 293 NLLAQLCSCADGRLKFREHAGAIAMVTKRLLRV----SPATNDRAVHILSSISKFSATYE 348
+L L +C DG+ + A+A++ +L V S A + V +L ++ + + +
Sbjct: 421 -VLCNLAACPDGKGAMLD-GNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFR 478
Query: 349 VVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEIL 382
+ GA L V + E+ +K++A +IL
Sbjct: 479 GLAS--EAGAEEVLMEVEENGNER-VKEKASKIL 509
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL +D L N
Sbjct: 174 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQ-LIPN 231
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 232 LAMKEVIDAFISENG 246
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL +D L N
Sbjct: 210 EIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQ-LIPN 267
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ NG
Sbjct: 268 LAMKEVIDAFIQENG 282
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 103 (41.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRD-SGLTS 63
E P F+CPI+ +M DPV +G +++R S++ + QP D S +
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQP---DLSTVIP 65
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLD--SGHLRISTLKKMEALAME 121
N ++ I +WC N ++ P A + VR + L SGH RI+ + + +A E
Sbjct: 66 NLAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGH-RIAKSEILPPVA-E 123
Query: 122 NERNRKSLEEAF-VVRA---LVLFIITSYKGNKTTGLEEALRILS 162
N + + +R+ L TS ++T + + RI S
Sbjct: 124 NSNSNSDYDSVMGAIRSRSRTSLSSTTSLPLHQTRPINHSTRIQS 168
Score = 68 (29.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 31/155 (20%), Positives = 73/155 (47%)
Query: 233 MVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIF 292
++ L+ + S++A + L + NR ++ +A AV + L + + +S + ++
Sbjct: 312 LLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMM--LSMIRSGESASRILL 369
Query: 293 NLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAV--HILSSISKFSATYEVV 350
LL L +C++G+ + A++++ +L A +D A + + ++ S
Sbjct: 370 -LLCNLAACSEGKGAMLD-GNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRF 427
Query: 351 LEMLS-VGAVSKLCMVTQADCEK-YLKDRAKEILR 383
+ S GA L + +++ LK++A +IL+
Sbjct: 428 RGLASEAGAEEILTEIVESESGSGRLKEKASKILQ 462
Score = 58 (25.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 221 LESTLNLDFFKEMVKLLKENISQQATKSGL---HVLLQACPMGGNRVKITEANAVFELIE 277
L S +D + +++L K S + T+ L +L + +R I + NA ++
Sbjct: 192 LTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVN 251
Query: 278 LELTKPEK 285
L L KP K
Sbjct: 252 LSLEKPNK 259
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL +D L N
Sbjct: 237 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQ-LIPN 294
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 295 LAMKEVIDAFISENG 309
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
VP FICPIS++IMKDP A G +Y+ E+I W + P+T LP + L N
Sbjct: 435 VPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRS-PMTNLALP-NLNLVPNR 492
Query: 66 TLRRLIQAW 74
LR I +
Sbjct: 493 VLRSFIHGY 501
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 154 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 211
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 212 LAMKEVIDAFISENG 226
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 55/248 (22%), Positives = 119/248 (47%)
Query: 14 ISLQIMKDPVTAITGISYDR--ESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRRLI 71
+ ++M+DPV +G S D+ ++ +K + T T LP + NH LR +I
Sbjct: 191 LQAEVMRDPVILPSGYSVDQTYQNNQK-RQNPWTNTSTFTDHSLPYSLSVP-NHLLRDMI 248
Query: 72 QAWCT-HNGI------DRIPTPKSALNKDQVRKLVRDLDSGHL--RISTLKKMEALAMEN 122
AWC H+ + D TP ++Q++++++ L SG+ + LK ++ L
Sbjct: 249 SAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILK-LFSGNSASQREALKLIQLLTKTT 307
Query: 123 ERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDL 182
+ + L + + +++ + YK + T LEE + L + +N+ ++ N+ L
Sbjct: 308 KGVQPCLAKYADIIPVLINLRRKYKSSWTQDLEEERLTIILNLTMHRQNREILAGQNE-L 366
Query: 183 IGALMWVLQWENN--DRHVAV-KTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKLLK- 238
GA+ +++ N R ++ K ++++ + ++ K +L++ + + M+K+
Sbjct: 367 AGAIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDMFRKRMLDAG-GMKMLRGMLKIKDT 425
Query: 239 ENISQQAT 246
E I++ AT
Sbjct: 426 EVITEAAT 433
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 283
Query: 65 HTLRRLIQAWCTHNG-IDRI 83
++ +I A+ + NG +D I
Sbjct: 284 LAMKEVIDAFISENGWVDLI 303
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 283
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 284 LAMKEVIDAFISENG 298
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 283
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 284 LAMKEVIDAFISENG 298
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 283
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 284 LAMKEVIDAFISENG 298
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 227 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 284
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 285 LAMKEVIDAFISENG 299
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
++P Y IS ++M++P +GI+YDR+ IE+ L+ PVT+ PL ++ L N
Sbjct: 227 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ-LIPN 284
Query: 65 HTLRRLIQAWCTHNG 79
++ +I A+ + NG
Sbjct: 285 LAMKEVIDAFISENG 299
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P YF+CPIS +IM+ P A G +++R SI +W + VTK+P + L N
Sbjct: 772 IPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDK-RGAISFVTKRPFSTSAILIPNR 830
Query: 66 TLRRLIQAW 74
L+ IQ W
Sbjct: 831 NLKAQIQEW 839
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
IE PQ FICPIS IM++P A G +Y+ + +WL + + P+T L + L
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKS-PMTNLRL-ENRNLIP 349
Query: 64 NHTLRRLIQAW 74
N LR I+ W
Sbjct: 350 NLVLRSAIKDW 360
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 114 (45.2 bits), Expect = 0.00051, P = 0.00051
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
EVP+ I+L++MK+PV +GI+YDRE I + L+ PVT++PL + + N
Sbjct: 184 EVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD-PVTRKPLTENE-IIPN 241
Query: 65 HTLRRLIQAWCTHN 78
+ L+ +I+ + N
Sbjct: 242 YALKEVIEKFLDDN 255
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 111 (44.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 32/95 (33%), Positives = 43/95 (45%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P F+CPIS +M DP+ +G SY+R + K T T P P S + N
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVI----ACK--TLGFTPTPPPDFSTVIPN 110
Query: 65 HTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLV 99
L+ I +WC P PK LN KL+
Sbjct: 111 LALKSAIHSWCERRCF---PPPKP-LNSAAAEKLI 141
Score = 49 (22.3 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 233 MVKLLKEN--ISQQATKSGLHVLLQACPMGGNRVK--ITEANAVFELIELELTKPEKS 286
MV +L+ + +++ +S + VL GG R K ANAV EL+++E + E++
Sbjct: 437 MVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERA 494
Score = 39 (18.8 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 142 IITSYKGNKTTGLEEAL 158
++T K N+ + +EEAL
Sbjct: 233 LLTKLKSNRISEIEEAL 249
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 405 405 0.0010 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 616 (65 KB)
Total size of DFA: 254 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.94u 0.09s 34.03t Elapsed: 00:00:02
Total cpu time: 33.95u 0.09s 34.04t Elapsed: 00:00:02
Start: Sat May 11 05:58:49 2013 End: Sat May 11 05:58:51 2013