BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015513
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 304 bits (778), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 263/449 (58%), Gaps = 57/449 (12%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
+EIE+P YFICPISL+IMKDPVT ++GI+YDR++I KWL+ K +CPVTKQPLP DS L
Sbjct: 6 EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE--KVPSCPVTKQPLPLDSDL 63
Query: 62 TSNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDL----DSGHLRISTLKK 114
T NH LRRLIQ WC N G+ RI TP+ K V + +++L R TL+K
Sbjct: 64 TPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREETLQK 123
Query: 115 MEALAMENERNRKSLEEAFVVRALVLFIITSYKGN-----KTTGLEEALRILSLVWSPSN 169
+E LAM+ NR+ + E V ++L+LF++ + + GL+E+LR+L L+ PSN
Sbjct: 124 LEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIPSN 182
Query: 170 ENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDF 229
+ K ++ N ++ +L WVL E+ K +++L+ + E S ++E LN +
Sbjct: 183 DAKTIL-MENDRVMESLTWVLHQED----FLSKAYTIVLLRNLTEYTSSHIVER-LNPEI 236
Query: 230 FKEMVKLLKENIS-----------------------------------QQATKSGLHVLL 254
FK ++ LK+ ++ +QA + L +LL
Sbjct: 237 FKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILL 296
Query: 255 QACPMGGNRVKITEANAVFELIELELT-KPEKSTTELIFNLLAQLCSCADGRLKFREHAG 313
+ NR + + AV ELIELE++ EK TEL+ +L++LC CA+GR + H G
Sbjct: 297 ETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRG 356
Query: 314 AIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKY 373
IA+VTKRLLRVSPA +DRA+ IL+++SKFS VV EM++VG V KLC V DC
Sbjct: 357 GIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLN 416
Query: 374 LKDRAKEILRLHSNVWNNSPCIQVYLLTR 402
LK++AKEIL+ H + W PCI + LLT+
Sbjct: 417 LKEKAKEILKDHFDEWKKFPCIDITLLTK 445
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 301 bits (770), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 252/410 (61%), Gaps = 16/410 (3%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
+EIE+P +F+CPISL+IMKDPV TGI+YDR+SIEKWL K +CPVTKQ + D+ L
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI-TDADL 66
Query: 62 TSNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHL-RISTLKKMEA 117
T NHTLRRLIQ+WCT N G++RIPTP+ + K ++ KL+RD S H ++ LK++
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 126
Query: 118 LAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRIL-SLVWSPSNENKALVD 176
+ EN N++ LE A V L + + T +EAL +L L S + L +
Sbjct: 127 IVSENATNKRCLEAAGVPEFLANIVSNDSENGSLT--DEALNLLYHLETSETVLKNLLNN 184
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKL 236
+ +++ +L ++Q + V A ++LK +LE+A + TL + F E+V++
Sbjct: 185 KKDNNIVKSLTKIMQRGMYESRV----YATLLLKNILEVADP-MQSMTLKPEVFTEVVQI 239
Query: 237 LKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIEL---ELTKPEKSTTELIFN 293
L + ISQ+ATK+ +H+L+ CP G NR K EA + +IEL E E+ E+
Sbjct: 240 LDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMV 299
Query: 294 LLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEM 353
+L LC CA+GR +F H AIA+V K++LRVS +DRAV +L S+ +F AT ++ EM
Sbjct: 300 VLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEM 359
Query: 354 LSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTRY 403
L +G V+KLC+V Q C K++AKE+L+LH+ VW +SPC+ ++ Y
Sbjct: 360 LQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAY 409
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 249/439 (56%), Gaps = 42/439 (9%)
Query: 1 MD-EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDS 59
MD EIE+P +F+CPISL IMKDPV TGI+YDRESIEKWL + K +CPVTKQ + ++
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT-ET 59
Query: 60 GLTSNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHL-RISTLKKM 115
LT NHTLRRLIQ+WCT N GI+RIPTPK + K ++ KL+++ S HL ++ LK++
Sbjct: 60 DLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 116 EALAMENERNRKSLEEAFVVRALVLFIITSYK---------------------------G 148
+ EN N++ LE A V L + S
Sbjct: 120 RQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFD 179
Query: 149 NKTTGLEEALRILSLVWSPSNENKALVDH-HNQDLIGALMWVLQWENNDRHVAVKTSAMI 207
+ + ++EAL +L + + K+L+++ +L+ L ++Q R + +
Sbjct: 180 SSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQ-----RGIYESRAYAA 234
Query: 208 VLKMVLELASKGLLESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKIT 267
+L L + + L + F E++++L + IS +AT+S + +L+ CP G NR K
Sbjct: 235 LLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAV 294
Query: 268 EANAVFELIEL---ELTKPEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLR 324
E + +IEL + E+ +E+ +L LC CA+GR +F H AIA+V+K++LR
Sbjct: 295 EGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILR 354
Query: 325 VSPATNDRAVHILSSISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
VS T++RAV +L S+ +F AT ++ EML +G V+KLC+V Q C K++AKE+L+L
Sbjct: 355 VSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKL 414
Query: 385 HSNVWNNSPCIQVYLLTRY 403
H+ VW SPC+ L Y
Sbjct: 415 HARVWRESPCVPRNLYDSY 433
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 23/380 (6%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I++P +F CPISL++M+DPVT TG +YDR SIE W+ +TTCPVT+ PL D L
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPL-SDFTLIP 70
Query: 64 NHTLRRLIQAWCT---HNGIDRIPTPKSALNKDQVRKLVRD---LDSGHL----RISTLK 113
NHTLRRLIQ WC NG++RIPTPK + VR L+ + H+ R + L+
Sbjct: 71 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALR 130
Query: 114 KMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKA 173
++ A ++++NR + L+ + + ++ AL ++ + P+
Sbjct: 131 RLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSI 190
Query: 174 LVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTL--NLDFFK 231
D + + L++ D + + +A ++++V L+ ++ + F+
Sbjct: 191 SSDPGRVEFLTRLLF-------DSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 232 EMVKLLKENI-SQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTEL 290
++ LL+ I S++A K G+ L C + R A A LI+ ++ TE
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 303
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVV 350
+ LC +G F EHA + ++ K +LRVS + A L ++ +
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWRE- 362
Query: 351 LEMLSVGAVSKLCMVTQADC 370
E G V +L ++ Q++C
Sbjct: 363 -EAAGAGVVVQLLLMVQSEC 381
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 204/410 (49%), Gaps = 29/410 (7%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I++P +F CPISL +M DPVT TG +YDR SI+ W+ +TTCPVT+ L D L
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVAL-SDFTLIP 69
Query: 64 NHTLRRLIQAWCT---HNGIDRIPTPKSALNKDQVRKLVRD---LDSGHL----RISTLK 113
NHTLRRLIQ WC NG++RIPTPK + VR L+ + H+ R + ++
Sbjct: 70 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIR 129
Query: 114 KMEALAMENERNRKSL----EEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSN 169
++ LA ++E+NR + +VR L I T+ ++ AL L L+
Sbjct: 130 RLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLAL--LVLLHMTET 187
Query: 170 ENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNL-- 227
E +A+ ++ +G + +L D + ++ +A +++MVL A L+ ++
Sbjct: 188 ECEAVASDPSR--VGFMTRLL----FDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSD 241
Query: 228 DFFKEMVKLLKENI-SQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKS 286
F+ ++ LLK I S++A K G+ + C + R A A LI+ ++
Sbjct: 242 SIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRC 301
Query: 287 TTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSAT 346
TE + LC +G F EHA + ++ K +LRVS + A L ++ +A
Sbjct: 302 DTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TAE 359
Query: 347 YEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQ 396
E + G V++L ++ Q+DC + K +A+ +L+L + W + +
Sbjct: 360 ERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVH 409
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 195/398 (48%), Gaps = 32/398 (8%)
Query: 3 EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLT 62
EI +P F CPIS ++MKDPV +GI+YDRE+IEKW ++ TCPVT L +
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQ-TCPVTNTVLTSLEQI- 87
Query: 63 SNHTLRRLIQAWCTHN---GIDRIPTPKSALNKDQVRKLVRDLDSGHLR------ISTLK 113
NHT+RR+IQ WC + GI+RIPTP+ + QV ++ L + R + +
Sbjct: 88 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 114 KMEALAMENERNRKSLEEAFVVRAL-VLFIITSYKGNKTTGLEEALRILSLVWSPSNENK 172
KM L E+ERNRK ++E L V F S N + LEE + +L+ + E +
Sbjct: 148 KMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGLEGQ 207
Query: 173 ALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKE 232
+ + + L+ +L+ N D++ A ++K +LEL + + ++ +E
Sbjct: 208 SKLTTTSS--FNRLVELLR--NGDQNAA------FLIKELLELNVTH-VHALTKINGVQE 256
Query: 233 --MVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTEL 290
M + +++ + S H++L +++ N E+ L E S E
Sbjct: 257 AFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEM----LVDSENSVCEK 312
Query: 291 IFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVV 350
+L +C +GR K R + I ++ K++L++S + V ++ + K EV
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDGSEVE 370
Query: 351 LEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNV 388
E L +GA KL ++ Q C + K++ E+L++ + V
Sbjct: 371 -EALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKV 407
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 196/398 (49%), Gaps = 31/398 (7%)
Query: 3 EIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLT 62
EI +P F CPIS+ +MKDPV TGI+YDR SIE W+ + + TCPVT L +
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSG-NKTCPVTNTVLTTFDQI- 85
Query: 63 SNHTLRRLIQAWCTHNG---IDRIPTPKSALNKDQVRKLVRDLDSGHLRIS------TLK 113
NHT+R++IQ WC G I RIPTP+ L +V ++ R L S R ++
Sbjct: 86 PNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIE 145
Query: 114 KMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNK--TTGLEEALRILSLVWSPSNEN 171
K++ L E+E+NRK + E V L + G++ T L E L +L+ ++ E
Sbjct: 146 KIKKLGDESEKNRKCVNENSVGWVLC-DCFDKFSGDEKLTFMLNEILSLLTWMFPIGLEG 204
Query: 172 -KALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFF 230
L + + L+ ++ D +V+ +A ++K +L L + +
Sbjct: 205 ISKLASATSFRCVAGLL-----KSTDD--SVRQNAAFIMKEILSLDETRVHSFAVENGVA 257
Query: 231 KEMVKLLKENISQQATKSGL----HVLLQACPMGGNRVKITEANAVFELIELELTKPEKS 286
+ +VKL+++++S +TKS L ++LQ + ++I + E+I E S
Sbjct: 258 EALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMI----VDAENS 313
Query: 287 TTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSAT 346
E +L +C GR + R++A + ++ K++ +VS ++ ++ + K T
Sbjct: 314 VCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNT 373
Query: 347 YEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
V + + +GA K+ +V Q + K++A E+L++
Sbjct: 374 V-AVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKM 410
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 23/406 (5%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
+D ++P FICPISL+ M+DPVT TG +Y+R +I KW TCP T Q L D+
Sbjct: 59 LDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGH-LTCPTTMQELWDDT- 116
Query: 61 LTSNHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLD--SGHLRISTLKKMEAL 118
+T N TL LI W + + + +S + + +++ L G R+ L +++ +
Sbjct: 117 VTPNKTLHHLIYTWFSQKYV--LMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQI 174
Query: 119 AMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGL--EEALRILSLVWSPSNENKALVD 176
+ + RK++ E V +I+S G T+ E + IL + S+ L+
Sbjct: 175 VIAHLMARKTVVEEGGVS-----VISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQ 229
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKL 236
LI ++ N+ + A ++ +V E + L S+ +L +++L
Sbjct: 230 PAKVSLIVDML------NDGSNETKINCARLIRGLVEEKGFRAELVSSHSL--LVGLMRL 281
Query: 237 LKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLA 296
+K+ + L +L R + AV +L+++ L + EL +L
Sbjct: 282 VKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDI-LPSLDPECLELALFVLD 340
Query: 297 QLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSV 356
LC+ +GR+ ++ A I + L+RVS + A+ IL S+ K A E + V
Sbjct: 341 ALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKL-APEECSPLAVEV 399
Query: 357 GAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTR 402
G +KL +V Q+ C+ LK R+ E+L+L S ++++ I LTR
Sbjct: 400 GLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYSDTMFISKCKLTR 445
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 192/404 (47%), Gaps = 27/404 (6%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E+P FICPISL+ M+DPVT TG +Y+R +I KW TCP T Q L D +T N
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGH-CTCPTTMQEL-WDDLVTPN 116
Query: 65 HTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDL--DSGHLRISTLKKMEALAMEN 122
TL +LI W + + + +S + + +++ L G ++ L +++ + M +
Sbjct: 117 KTLHQLIYTWFSQKYV--LMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAH 174
Query: 123 ERNRKSLEE---AFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHN 179
+K++ + FV+ +L+ + G+ EA+ IL + S+ L+
Sbjct: 175 AIAKKTVVDEGGVFVISSLLSPFTSHAVGS------EAIAILVNLELDSDSKAGLMQPAR 228
Query: 180 QDLIGALMWVLQWENNDRHVAVKTS-AMIVLKMVLELASKGLLESTLNLDFFKEMVKLLK 238
L+ ++ ND + K + A ++ ++V E + L S+ +L +++L+K
Sbjct: 229 VSLMVDML-------NDGSIETKINCARLIGRLVEEKGFRAELVSSHSL--LVGLMRLVK 279
Query: 239 ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQL 298
+ + L +L R + AV +L+++ L + E +L L
Sbjct: 280 DRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDV-LPCLDVECLESALFVLDSL 338
Query: 299 CSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEMLSVGA 358
C ++GR+ ++ I + L++VS + A+ IL S+ K A+ E + VG
Sbjct: 339 CLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKL-ASEECSSLAVEVGL 397
Query: 359 VSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVYLLTR 402
+KL +V Q+ C+ LK R+ E+L+L S +++S I LTR
Sbjct: 398 AAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDSMFISKCKLTR 441
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 190/399 (47%), Gaps = 32/399 (8%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP +F CPISL +M+ PV+ TG++YDR SI++WL + TCP T Q L +
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLD-GGNNTCPATMQ-LLKTKDFVP 67
Query: 64 NHTLRRLIQAWCT-----HNGIDRI---PTPKSALNKDQVRKLVRDLDSGHLRISTLKKM 115
N TL+RLI W HNG + P+ + K++V L+ L + + L K+
Sbjct: 68 NLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERL----MSLENLMKI 123
Query: 116 EALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRIL-SLVWSPSNENKAL 174
+++ NR+ L + +++ II + K K + A+RIL S+ + +
Sbjct: 124 VRFVKDSDSNREFLSKKMEFVPMLVDIIRT-KKTKIELVIMAIRILDSIKVDRERLSNLM 182
Query: 175 VDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMV 234
+ + D + A++ +Q N + K ++ VL + A L+ + + EM+
Sbjct: 183 LANDGGDCLTAILLAIQRGN----LESKIESVRVLDWISFDAKSKLMIAERD-GVLTEMM 237
Query: 235 KLLK--ENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTK--PEKSTTEL 290
K + E+ ++ L L+ R K+ A A+ ++ ++ LT+ + TE
Sbjct: 238 KSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEK 297
Query: 291 IFNLLAQLCSCADGRLKF--REHAGAIAMVTKRLLRVSPATNDRAVHI---LSSISKFSA 345
LL L S +GRL+ ++ + V K+LL+VS + AV I L + +
Sbjct: 298 SLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDK 357
Query: 346 TYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
T E +E V+KL +V Q++C ++ AK+++++
Sbjct: 358 TVEETVE--RSNGVTKLLVVIQSNCSAMVRQMAKDLIKV 394
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 201/425 (47%), Gaps = 52/425 (12%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP +F CPISL +MK PV+ TG++YDR SI++WL + TCP T Q L ++
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLD-GGNNTCPATMQIL-QNKDFIP 65
Query: 64 NHTLRRLIQAW--------CTHNGIDRIPTPK---SALNKDQVRKLVRDLDSGHLRISTL 112
N TL+RLI+ W C + PT A+++ ++ K RD L
Sbjct: 66 NRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERD------DREVL 119
Query: 113 KKMEALAMENERNRKSL--EEAFVVRALVLFI----ITSYKGNKTTGLEEALRILSLVWS 166
K+ E++ NR L ++ F V+ LV I + K+ ++EA++ILS + S
Sbjct: 120 SKIVRFGRESDDNRGFLAGKDDF-VKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRS 178
Query: 167 PSNENKA---LVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLES 223
++ + L+ + +D + ++++ + N V +K +L+ + A LL +
Sbjct: 179 KVSDRRRFSNLILTNGRDRLSVIVYLFKTGN----VELKIDCAGLLEFIAVDAESKLLIA 234
Query: 224 TLNLDFFKEMVKLLKENISQQATKSGLHVLLQ-ACPMGGNRVKITEANAVFELIELELTK 282
+ E++K + ++ +S L L+ + P RVK+ N + E + ++TK
Sbjct: 235 ERD-GLITELMKSISKDSDLSLIESSLSCLIAISSP---KRVKL---NLLREKLIGDVTK 287
Query: 283 --------PEKSTTELIFNLLAQLCSCADGRLKFREHAG-AIAMVTKRLLRVSPATNDRA 333
S TE LL L S +GR + G + V K+L++VS A + A
Sbjct: 288 LLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHA 347
Query: 334 VHILSSISKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSP 393
V +L S+S + + + SV V+K+ ++ Q++C ++ ++L++ N+
Sbjct: 348 VTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFK--VNSRS 405
Query: 394 CIQVY 398
C+ Y
Sbjct: 406 CLSAY 410
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 154/351 (43%), Gaps = 40/351 (11%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ F CPISL++M DPV +G +Y+RE I+KWL+ TCP T++ L D +T N+
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGH-LTCPKTQETLTSDI-MTPNYV 314
Query: 67 LRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTL-------------- 112
LR LI WC NGI+ P + + D H +I L
Sbjct: 315 LRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRS 374
Query: 113 --KKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEAL-RILSLVWSPSN 169
++ LA +N NR ++ + + LV + S N + E A+ IL+L N
Sbjct: 375 AAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTIS---NDSRTQEHAVTSILNLSICQEN 431
Query: 170 ENKALVDHHNQDLIGALMWVLQ---WENNDRHVAVKTSAMIVLKMVLELASKGLLESTLN 226
+ K + ++ + ++ VLQ E + A S ++ + + + + G +
Sbjct: 432 KGKIV---YSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAI----- 483
Query: 227 LDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKS 286
+V LL E SQ+ K L C GN+ K A V L+ L LT+PE
Sbjct: 484 ----PPLVTLLSEG-SQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRL-LTEPESG 537
Query: 287 TTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
+ ++LA L S DG+ + A A+ ++ + SP + + +L
Sbjct: 538 MVDESLSILAILSSHPDGKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVL 587
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 194/404 (48%), Gaps = 26/404 (6%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
VP +F CPISL +MK PV+ TG++YDR SI++WL + TCP T Q L ++ N
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNN-TCPATMQIL-QNKEFVPNL 68
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVR-DLDSGHLRISTLKKMEALAMENER 124
TL RLI W + I+R +S + R + ++ + K+ A E++
Sbjct: 69 TLHRLIDHW--SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDE 126
Query: 125 NRKSL--EEAFVVRALVLFIITSYKGNKTTGL---EEALRILSLVWSPSNENKALVD--- 176
NR+ L ++ FV A+++ +I+ + + L EA++ILS++ + + L +
Sbjct: 127 NREFLAGKDDFV--AMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNLIL 184
Query: 177 HHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMVKL 236
+ D + + +++ N + + SA++ + ++ SK ++ L E++KL
Sbjct: 185 TNGGDCLTSFFLLIKRGNP--KLKIDCSAVLEF-IAVDAESKLIIAKGEGL--VTEIIKL 239
Query: 237 LKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEK--STTELIFNL 294
+ + ++ L +L+ ++ + V +L L LT P S TE L
Sbjct: 240 ISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSL-LTDPTTSVSVTEKCLKL 298
Query: 295 LAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSISKFSATYEVVLEML 354
L + SC +GR + + + V +L++VS A + AV +L S+ + ++
Sbjct: 299 LEAISSCKEGRSEICDGV-CVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDAVI 357
Query: 355 SVGAVSKLCMVTQADCEKYLKDRAKEILRLHSNVWNNSPCIQVY 398
+ V+K+ ++ Q++C ++ ++L++ N+ C+ VY
Sbjct: 358 RINGVTKILLLLQSNCSLTVRHMLTDLLKVFK--VNSRSCLSVY 399
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 37/317 (11%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F CPISL++M+DPV +G +Y+R I+KWL + TCP T+QPL S LT N
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGH-KTCPKTQQPLSHTS-LTPNF 285
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALN-KDQVRKLVRDLDSGHLRISTLKKMEA------- 117
L+ LI WC NGI+ PK+ N +D+ D D L +S + ++ +
Sbjct: 286 VLKSLISQWCEANGIE---LPKNKQNSRDKKAAKSSDYDHAGL-VSLMNRLRSGNQDEQR 341
Query: 118 --------LAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSN 169
LA N NR + EA + LV + +S + E A+ L + N
Sbjct: 342 AAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQ----EHAVTALLNLSIHEN 397
Query: 170 ENKALVDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDF 229
++VD H I ++ E + A S +V + + + + G + +NL
Sbjct: 398 NKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLC 457
Query: 230 FKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTE 289
+ S + K + C GN+V+ +A V L+ L P +
Sbjct: 458 ----------DGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNF-LVDPTGGMID 506
Query: 290 LIFNLLAQLCSCADGRL 306
+LL+ L +G++
Sbjct: 507 EALSLLSILAGNPEGKI 523
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F+CPI+L+IM DPV TG +Y++ESI+KW A TCP T+Q L S L N
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFD-AGHKTCPKTRQELDHLS-LAPNF 347
Query: 66 TLRRLIQAWCTHNGIDRIP----TPKSA-LNKDQVRKLVRDLDSGHL--RISTLKKMEAL 118
L+ LI WC N +IP +P S KD+V LV L S L + ++K+M L
Sbjct: 348 ALKNLIMQWCEKNNF-KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 119 AMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHH 178
A EN NR + A + LV + SY +G++E L S NK L+
Sbjct: 407 ARENPENRVLIANAGAIPLLVQLL--SY---PDSGIQENAVTTLLNLSIDEVNKKLI--S 459
Query: 179 NQDLIGALMWVLQWENNDRHVAVKTSAMI 207
N+ I ++ +L EN +R ++A +
Sbjct: 460 NEGAIPNIIEIL--ENGNREARENSAAAL 486
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 140/320 (43%), Gaps = 44/320 (13%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P F CPISL++M+DPV +G +Y+R IEKW++ +TCP T+Q L + LT N+
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGH-STCPKTQQAL-TSTTLTPNY 313
Query: 66 TLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALAMENERN 125
LR LI WC N I+ P P S+L +V ++ +I L M LA N +
Sbjct: 314 VLRSLIAQWCEANDIEP-PKPPSSLRPRKVSSFSSPAEAN--KIEDL--MWRLAYGNPED 368
Query: 126 RKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKALVDHHNQDLIGA 185
++S A + ++ + + EA I LV S + + +H + A
Sbjct: 369 QRSA-------AGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHS----VTA 417
Query: 186 LMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLN------------------- 226
L+ + ENN + V A+ + VL+ KG +E+ N
Sbjct: 418 LLNLSICENN-KGAIVSAGAIPGIVQVLK---KGSMEARENAAATLFSLSVIDENKVTIG 473
Query: 227 -LDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEK 285
L +V LL E +Q+ K L C GN+ K A + L L LT+P
Sbjct: 474 ALGAIPPLVVLLNEG-TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRL-LTEPGS 531
Query: 286 STTELIFNLLAQLCSCADGR 305
+ +LA L S +G+
Sbjct: 532 GMVDEALAILAILSSHPEGK 551
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P+YF CPISL++MKDPV TG +Y+R SI+KWL A TCP +++ L +GLT N+
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLD-AGHKTCPKSQETLLH-AGLTPNY 305
Query: 66 TLRRLIQAWCTHNGID 81
L+ LI WC NGI+
Sbjct: 306 VLKSLIALWCESNGIE 321
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I +P F CPISL++MKDPV TG +Y+R IEKW+ + TCP T+Q + S LT
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHH-TCPTTQQKM-STSALTP 328
Query: 64 NHTLRRLIQAWCTHNGID--------RIPTPK-SALNKDQVRKLVRDL---DSGHLRIST 111
N+ LR LI WC NG++ PTP S+ + + L+ L D+ R S
Sbjct: 329 NYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQR-SA 387
Query: 112 LKKMEALAMENERNRKSLEEAFVV 135
++ LA N NR + EA +
Sbjct: 388 AAELRLLAKRNANNRICIAEAGAI 411
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I +P F CPISL++MKDPV TG +Y+R IEKW+ + TCP T+Q + S LT
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHH-TCPTTQQKM-STSALTP 328
Query: 64 NHTLRRLIQAWCTHNGID--------RIPTPK-SALNKDQVRKLVRDL---DSGHLRIST 111
N+ LR LI WC NG++ PTP S+ + + L+ L D+ R S
Sbjct: 329 NYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQR-SA 387
Query: 112 LKKMEALAMENERNRKSLEEAFVV 135
++ LA N NR + EA +
Sbjct: 388 AAELRLLAKRNANNRICIAEAGAI 411
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 23/284 (8%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
D++ +P F+CP+SL++MKDPV TG +Y+R I++W+ + TCP T+Q L + L
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCG-NLTCPKTQQKL-ENFTL 294
Query: 62 TSNHTLRRLIQAWCTHNGIDRIPT-----PKSALNKDQVRKLVRDLDSGHL--RISTLKK 114
T N+ LR LI WC + I++ K++ + +R LV+ L S R + + +
Sbjct: 295 TPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSE 354
Query: 115 MEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSLVWSPSNENKAL 174
+ +L+ + NR + EA + LV + + + + L + S NK L
Sbjct: 355 IRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNL-----SIYENNKEL 409
Query: 175 VDHHNQDLIGALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGLLESTLNLDFFKEMV 234
+ GA+ ++Q A + +A + + L +K ++ + +V
Sbjct: 410 I-----MFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGS---GAIPALV 461
Query: 235 KLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIEL 278
LL EN + + K L C GN+ + A V L+++
Sbjct: 462 DLL-ENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKM 504
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 46/404 (11%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
D + +P+ F+CPISL++MKDP TG +Y+R I++W+ + +CP T+Q L + L
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCG-NLSCPKTQQKL-ENFTL 296
Query: 62 TSNHTLRRLIQAWCTHNGIDRIPTPKSALNK----------------DQVRKLVRDLDSG 105
T N+ LR LI WCT + I++ P +N +R LV L S
Sbjct: 297 TPNYVLRSLISQWCTKHNIEQ---PGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQ 353
Query: 106 HL--RISTLKKMEALAMENERNRKSLEEAFVVRALVLFIITSYKGNKTTGLEEALRILSL 163
+ R + + ++ +L+ + NR + EA + LV + + G+ T IL+L
Sbjct: 354 SIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD--GDTETQENAVTCILNL 411
Query: 164 VWSPSNENKALVDHHNQDLI---GALMWVLQWENNDRHVAVKTSAMIVLKMVLELASKGL 220
+ HN++LI GA+ ++ A + +A + + L +K +
Sbjct: 412 S----------IYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKII 461
Query: 221 LESTLNLDFFKEMVKLLKENISQQATKSGLHVLLQACPMGGNRVKITEANAVFELIELEL 280
+ ++ +V LL+ S + K L C GN+ + A V L+++
Sbjct: 462 IGAS---GAIMALVDLLQYG-SVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLT 517
Query: 281 TKPEKSTTELIFNLLAQLCSCADGRLKFREHAGAIAMVTKRLLRVSPATNDRAVHILSSI 340
+ + +L+ L S + A AI + L + P + A IL +
Sbjct: 518 DSSSERMADEALTILSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPRNRENAAAILLCL 576
Query: 341 SKFSATYEVVLEMLSVGAVSKLCMVTQADCEKYLKDRAKEILRL 384
K E ++ + +GAV L +++ E+ K +A +L L
Sbjct: 577 CKRDT--EKLISIGRLGAVVPLMELSRDGTERA-KRKANSLLEL 617
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I VP+ F+CPISL +M DPV TG +YDR SI +W++ TCP T Q L DS +
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGH-CTCPKTGQML-MDSRIVP 360
Query: 64 NHTLRRLIQAWCTHNGIDR---------------IPTPKSAL--NKDQVRKLVRDLDSGH 106
N L+ LI WCT +GI +PT K+A+ NK V L++ L G
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPNESFASALPT-KAAVEANKATVSILIKYLADGS 419
Query: 107 LRISTL--KKMEALAMENERNRKSLEEAFVV 135
T+ +++ LA + NR + EA +
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAI 450
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ F+CPI+ QI DPVT TG +Y+R++I++WL+T +TTCP+T+QPL +N+
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTG-NTTCPITRQPLSASILPKTNYV 570
Query: 67 LRRLIQAWCTHN 78
L+RLI +W N
Sbjct: 571 LKRLITSWKEQN 582
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ F+CPI+ QI DPVT TG +Y+R++I++WL+T +TTCP+T+QPL +N+
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTG-NTTCPITRQPLSASILPKTNYV 570
Query: 67 LRRLIQAWCTHN 78
L+RLI +W N
Sbjct: 571 LKRLITSWKEQN 582
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 157/390 (40%), Gaps = 61/390 (15%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW + TCP T+Q LP S LT N+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN-TCPKTQQQLPHIS-LTPNNC 330
Query: 67 LRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDS------GHLRISTLKKMEALAM 120
++ LI +WC NG P + + D R + D +S + LK ++ + +
Sbjct: 331 VKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPL 390
Query: 121 ENERN----RKSLEEAFV-----VRALVLFIITSYKG-----NKTTGLEEALRI---LSL 163
E R++ EE+FV + ++ Y+ N+ GLE+ ++ + L
Sbjct: 391 EENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRL 450
Query: 164 VWSPSNENK-----------------ALVDHHN---QDLIGALMWVLQWENNDRHVAVKT 203
+ E + + VD +N QD ++ L NN + T
Sbjct: 451 LLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 204 SAMIVL--KMVLELASKGLLES-TLNLDFFKE-------------MVKLLKENISQQATK 247
S +I L KM+ S G + LNL E +V+LL++ I Q
Sbjct: 511 SGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKL 570
Query: 248 SGLHVLLQACPMGGNRVKITEANAVFELIELELTKPEKSTTELIFNLLAQLCSCADGRLK 307
LH L N + +N + L L + E E +L L S +G+ +
Sbjct: 571 DALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDE 630
Query: 308 FREHAGAIAMVTKRLLRVSPATNDRAVHIL 337
G I+ + L ++AV L
Sbjct: 631 AVSSQGMISSLATVLDMGDTTEQEQAVSCL 660
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
VP+ F CPISL +M+DPV A TG +YDR SI +W++ +TCP + Q L D L
Sbjct: 295 FSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGH-STCPNSGQTLA-DHRLVP 352
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKS------------------ALNKDQVRKLVRDLDSG 105
N LR LI WC G+ + +P+S NK R LVR L+ G
Sbjct: 353 NRALRSLISQWCGVYGL-QYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDG 411
Query: 106 --HLRISTLKKMEALAMENERNR 126
+++ K++ LA ++NR
Sbjct: 412 SENVKAVAAKEIRLLAKTGKQNR 434
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW + +CP T+Q LP S LT N+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN-SCPKTQQQLPHLS-LTPNYC 333
Query: 67 LRRLIQAWCTHNGIDRIPT-PKSALNKDQVRKLVRDLDS 104
++ LI +WC NGI +PT P +L+ + R + D +S
Sbjct: 334 VKGLIASWCEQNGI-TVPTGPPESLDLNYWRLAMSDSES 371
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ F+CPI+ QI DPVT TG +Y+R++I++WL T +TTCP+T+Q L + +N+
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTG-NTTCPITRQALSANILPKTNYV 572
Query: 67 LRRLIQAWCTHN 78
L+RLI +W N
Sbjct: 573 LKRLIVSWKEQN 584
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
++ + P+ F CP+S ++M+DPV +G +YD+ I+KWL + + TCP T+Q LP +
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSG-NRTCPKTQQVLPH-TA 126
Query: 61 LTSNHTLRRLIQAWCTHNGID 81
LT N +R +I WC NG++
Sbjct: 127 LTPNLLIREMISKWCKKNGLE 147
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
++P F CPISL+IM DPV +G ++DR SI++W+ + + TCP+TK PL L
Sbjct: 3 FDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSG-NRTCPITKLPLSETPYLIP 61
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKS------ALNKDQVRKLVRDLDSGHLRISTLKKMEA 117
NH LR LI + H + P++ + ++ + LV S ++ +L ++
Sbjct: 62 NHALRSLILNF-AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 118 LAMENERNRKSLEEAFVVRA 137
L + R+ + E+ VRA
Sbjct: 121 LTKRDSSIRRKVTESGAVRA 140
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+EVP+ F C +S IM DPV +G +Y++ I +WL D TCP KQ L R LT
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN--HDLTCPTAKQVLYR-VCLTP 128
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRD-LDSGHLRIST 111
NH + LI WC N DR P PK + + D V +L D ++S RIS+
Sbjct: 129 NHLINELITRWCLANKYDR-PAPKPS-DIDYVTELFTDGIESLLQRISS 175
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MDEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSG 60
+ + +P F CPI+L++M+DPV TG +YDRESI+ W+++ + TCP T Q L + +
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHN-TCPKTGQVL-KHTS 326
Query: 61 LTSNHTLRRLIQAWCTHNGI 80
L N L+ LI WC I
Sbjct: 327 LVPNRALKNLIVLWCRDQKI 346
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P+ CPISLQ+M DPV +G +Y+R IEKW + TCP T Q L LT N+
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHN-TCPKTHQQLSH-LCLTPNYC 337
Query: 67 LRRLIQAWCTHNGIDRIPTPKSALN 91
++ LI +WC NG+ P +L+
Sbjct: 338 VKALISSWCEQNGVQVPDGPPESLD 362
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E PQYFICPISL++MKDP A G +Y+ E+I WL+ +T+ P+T L + L N
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETS-PMTNTKL-HHTKLVPN 381
Query: 65 HTLRRLIQAW 74
LR IQ W
Sbjct: 382 LALRSAIQEW 391
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 15/139 (10%)
Query: 4 IEVP-QYFICPISLQIMKDPVTAITGISYDRESIEKWLKT---AKDTTCPVTKQPLPRDS 59
+E P Q FICP++ +IM+DPVT TG++ +R+++ +W + + + CPVT Q L +
Sbjct: 243 MEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTTE- 301
Query: 60 GLTSNHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVRDLDSGHLRISTLKKMEALA 119
L++N L+ +IQ W N RI +AL+ +V I L+ ++
Sbjct: 302 -LSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMV---------IDALRDLQMTC 351
Query: 120 MENERNRKSLEEAFVVRAL 138
E N+ + EA +++ L
Sbjct: 352 EGKEYNKVQVREAGIIQLL 370
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
P YFICPI ++M+DP A G +Y+ E+I WL + DT+ P+T L S L +NH
Sbjct: 763 APPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTS-PMTNVKLSHTS-LIANH 820
Query: 66 TLRRLIQAWCTHN 78
LR IQ W H+
Sbjct: 821 ALRSAIQEWLQHH 833
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P YFICPIS ++M++P A G +Y+ ES+ +WL +T+ P+T L ++ L NH
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETS-PMTNLKLAHNN-LVPNHA 555
Query: 67 LRRLIQAWCTHNG 79
LR IQ W N
Sbjct: 556 LRSAIQEWLQRNS 568
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
P F+CPI+ +IMKDPV A G SY+RE+IE W+ T K+ T P+T PL + + LT N
Sbjct: 417 TPDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-KNRTSPMTNLPL-QTTLLTPNR 474
Query: 66 TLRRLIQAWCT 76
TL+ I W T
Sbjct: 475 TLKMAIFRWST 485
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 2 DEIEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGL 61
D ++P F+CPI ++MK+P A G SY+ E+I++WL DT+ P+T L L
Sbjct: 685 DPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTS-PMTNLRLDYQM-L 742
Query: 62 TSNHTLRRLIQAW 74
T NHTLR LIQ W
Sbjct: 743 TPNHTLRSLIQDW 755
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRR 69
+CPISL+IM DPV TG +YDR SI KW + + TCP+T + L + L N ++R+
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSG-NITCPITGKILT-STELVDNVSVRQ 349
Query: 70 LIQAWCTHNGI 80
+I+ C NGI
Sbjct: 350 VIRKHCKTNGI 360
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
I +P YF CP+S ++M DPV +G ++DR SI+KWL CP T+Q L L
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGL-AVCPRTRQVLTHQE-LIP 293
Query: 64 NHTLRRLIQAWCTHNGID 81
N+T++ +I +W N I+
Sbjct: 294 NYTVKAMIASWLEANRIN 311
>sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52
PE=2 SV=1
Length = 845
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 7 PQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHT 66
P +FICP+ +M +P A G +YDRE+IE+WL+ KDT+ PVT PLP + L +N+T
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQ-KDTS-PVTNLPLP-NKNLIANYT 832
Query: 67 LRRLIQAW 74
L I W
Sbjct: 833 LYSAIMEW 840
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 5 EVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSN 64
E PQYFICPI+ IM+DP A G +Y+ E+I +W + +T+ P+ + LP S L N
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETS-PMINKRLPHTS-LVPN 409
Query: 65 HTLRRLIQAW 74
LR IQ W
Sbjct: 410 LALRSAIQEW 419
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 8 QYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDT----TCPVTKQPLPRDSGLTS 63
+ FICP++ ++M DPVT G +++RE+IEKW K +D+ +CP+T Q L + +++
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELT-STDVSA 83
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSAL 90
+ LR I+ W + N ++ + +L
Sbjct: 84 SIALRNTIEEWRSRNDAAKLDIARQSL 110
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 10 FICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNHTLRR 69
F CPIS++IM+DP A G +Y+ E KWL++ T+ P T +PL + L NHTLR
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTS-PKTNKPL-ENHNLVPNHTLRI 294
Query: 70 LIQAWCTHN 78
+I+ W N
Sbjct: 295 IIKDWLEKN 303
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+ VP F+CPI+ ++MKDPV A G SY++E++E W+ + ++ P+T PLP LT
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSS-PMTNLPLPSLV-LTP 459
Query: 64 NHTLRRLIQAW 74
N TL+ I W
Sbjct: 460 NRTLKMAISRW 470
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 1 MDEIE--VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRD 58
MD + +P FICPI+ ++MKDPV A G SY+RE++E W+ K T+ P+T LP
Sbjct: 395 MDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS-PMTNLALPSL 453
Query: 59 SGLTSNHTLRRLIQAW 74
LT N TL+ I W
Sbjct: 454 V-LTPNRTLKMAINRW 468
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P FICPI+ ++MKDPV A G SY+RE++E W+ K T+ P+T LP LT N
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS-PMTNLALPSLV-LTPNR 461
Query: 66 TLRRLIQAW 74
TL+ I W
Sbjct: 462 TLKMAINRW 470
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 6 VPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTSNH 65
+P FICPI+ ++MKDPV A G SY++E++E W+ K T+ P+T LP + LT N
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTS-PMTNLVLPS-AVLTPNR 461
Query: 66 TLRRLIQAW 74
TL+ I W
Sbjct: 462 TLKMAINRW 470
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 4 IEVPQYFICPISLQIMKDPVTAITGISYDRESIEKWLKTAKDTTCPVTKQPLPRDSGLTS 63
+EVP+ FIC +S +IM +P+ +G ++++ I +WLK + TCP TKQ L +
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER--TCPRTKQVL-YHRFMIP 119
Query: 64 NHTLRRLIQAWCTHNGIDRIPTPKSALNKDQVRKLVR-DLDSGHLRISTLKKME 116
NH + +I+ WC + DR PK++ D+V L DL+S RIS+ +E
Sbjct: 120 NHLINEVIKEWCLIHNFDR---PKTS---DEVIDLFTGDLESLLQRISSPSSVE 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,025,863
Number of Sequences: 539616
Number of extensions: 5102959
Number of successful extensions: 15398
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 15232
Number of HSP's gapped (non-prelim): 126
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)