BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>015516
MLLYLIITCFSLILFLNCLALKPLPPWARPTELRLLSLCFWKEISFFSIPSSLKNSLNIT
TIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMSVLDLPELVLECILEKLPPSGLCNMAAVC
SSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQWHLASRKDSTHLKQGKQRLWMKLFSF
VRSFSWVRSKVHDTSKQTTTTRLPVDSNSIMSWYLALETGRFWFPAQVYNRENGHVGFML
SCYDAELSYDQSTDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCLNDL
HPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGNENFCHCHNSETLILEFNQYTPGSRWR
KTTINRKDHREEGNEADGFYGGIRKVNNEEEIKMWKRLWPVEVLE

High Scoring Gene Products

Symbol, full name Information P value
AT2G32560 protein from Arabidopsis thaliana 5.5e-128
AT2G26850 protein from Arabidopsis thaliana 5.1e-122
AT2G41170 protein from Arabidopsis thaliana 3.8e-101

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  015516
        (405 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060236 - symbol:AT2G32560 "AT2G32560" species...  1192  5.5e-128  2
TAIR|locus:2039498 - symbol:AT2G26850 "AT2G26850" species...  1200  5.1e-122  1
TAIR|locus:2063167 - symbol:AT2G41170 "AT2G41170" species...  1003  3.8e-101  1


>TAIR|locus:2060236 [details] [associations]
            symbol:AT2G32560 "AT2G32560" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001810 Pfam:PF00646
            PROSITE:PS50181 SMART:SM00256 EMBL:CP002685
            GenomeReviews:CT485783_GR SUPFAM:SSF81383 EMBL:AC004681
            eggNOG:NOG247418 HOGENOM:HOG000030653 ProtClustDB:CLSN2679978
            EMBL:AY074536 EMBL:AY096469 EMBL:AY085567 IPI:IPI00518201
            PIR:T02555 RefSeq:NP_850191.1 UniGene:At.27709
            ProteinModelPortal:Q8RY82 SMR:Q8RY82 DNASU:817817
            EnsemblPlants:AT2G32560.1 GeneID:817817 KEGG:ath:AT2G32560
            TAIR:At2g32560 InParanoid:Q8RY82 OMA:CRSMRER PhylomeDB:Q8RY82
            Genevestigator:Q8RY82 Uniprot:Q8RY82
        Length = 371

 Score = 1192 (424.7 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 228/369 (61%), Positives = 271/369 (73%)

Query:    40 FWKEISFFSIPSSLKNSLNITTIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMSVLDLPEL 99
             F K +S     S  K  L+     I +P ++  H   T +D    V    +MSVLDLPEL
Sbjct:    15 FTKSLSLPPWASETKTLLSF--YFIKNPFMNTLHQ--TKHDPASPVID--QMSVLDLPEL 68

Query:   100 VLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQWHLAS 159
              L+CIL+ LPPSGLC+MA VCSSLR+RC+SDHLWEKH+K KWG+I+GPAA+REWQ +++S
Sbjct:    69 ALDCILDLLPPSGLCSMARVCSSLRERCVSDHLWEKHLKTKWGKILGPAAHREWQCYISS 128

Query:   160 RK---DSTHLKQGKQRLWMKLXXXXXXXXXXXXKVHDTSKQTTTTRLPVDSNSIMSWYLA 216
                  DS H + G    + K+            +  D  ++   + LP+DS+  MS YL+
Sbjct:   129 STYHLDSPHHQTGNLG-FAKIISLIRSLSSVFRE--DKQRRGYASSLPLDSS--MSCYLS 183

Query:   217 LETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDQSTDTFQARYPPHGRRPIAIECGVPW 276
             LETGRFWFPAQVYNRENGHVGFMLSCYDAELSYD  TDTFQARYPPHGRR  AIE GV W
Sbjct:   184 LETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTHTDTFQARYPPHGRRASAIEKGVTW 243

Query:   277 ERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGNEN 336
             +R+RAAP+D SPH LH+SD L +L PGDHIEIQWRRNKEFPYGWWYG+V HLESCDG+ N
Sbjct:   244 DRIRAAPIDASPHLLHVSDSLKELKPGDHIEIQWRRNKEFPYGWWYGLVRHLESCDGDHN 303

Query:   337 FCHCHNSETLILEFNQYTPGSRWRKTTINRKDHREEGNEADGFYGGIRKVNNEEEIKMWK 396
              CHCH SET++LEFNQYT GSRWR+T I R DH+EEGNE DGFYGGIRK+N +EEI MWK
Sbjct:   304 HCHCHLSETVVLEFNQYTVGSRWRRTMIMR-DHKEEGNEEDGFYGGIRKLNCKEEIAMWK 362

Query:   397 RLWPVEVLE 405
             R WP  +LE
Sbjct:   363 RHWPCSILE 371

 Score = 85 (35.0 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 21/42 (50%), Positives = 24/42 (57%)

Query:     1 MLLYLIITCFSLILFLNCLALKPLPPWARPTELRLLSLCFWK 42
             MLLY +ITC S   F   L+L   PPWA  T+  LLS  F K
Sbjct:     1 MLLYFLITCLSFFFFTKSLSL---PPWASETKT-LLSFYFIK 38


>TAIR|locus:2039498 [details] [associations]
            symbol:AT2G26850 "AT2G26850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0030048 "actin filament-based movement"
            evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002685 GenomeReviews:CT485783_GR
            SUPFAM:SSF81383 EMBL:AC005168 EMBL:BT012221 EMBL:BT012423
            IPI:IPI00536694 PIR:T02650 RefSeq:NP_180253.2 UniGene:At.50102
            ProteinModelPortal:Q6NLB1 SMR:Q6NLB1 PRIDE:Q6NLB1
            EnsemblPlants:AT2G26850.1 GeneID:817226 KEGG:ath:AT2G26850
            TAIR:At2g26850 eggNOG:NOG247418 HOGENOM:HOG000030653
            InParanoid:Q6NLB1 OMA:TWERIRA PhylomeDB:Q6NLB1
            ProtClustDB:CLSN2679978 Genevestigator:Q6NLB1 Uniprot:Q6NLB1
        Length = 371

 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 228/373 (61%), Positives = 274/373 (73%)

Query:    36 LSLCFW-KEISFFSIPSSLKNSLNITTIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMSVL 94
             LS  F+ K +SF    S  KN L+       S  L    +   + D    V G  +MS+L
Sbjct:    10 LSFFFFSKSLSFPQWASKTKNLLSFYF----SKYLFTNSLHQITPDLASPVLG--KMSIL 63

Query:    95 DLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQ 154
             DLP+L L+CILE LPPS LC MA VCSSLR+RC+SDHLWEKH+K KWG+I+GP+A++EWQ
Sbjct:    64 DLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHKEWQ 123

Query:   155 WHLAS--RKDSTHLKQGKQRLWMKLXXXXXXXXXXXXKVHDTSKQTTTTRLPVDSNSIMS 212
              +L+S    DS H K     L  K+               D  ++   + +P+DS   M+
Sbjct:   124 CYLSSPYHLDSPHHKTSHLGL-AKIISLMRSLSSIFRD--DDHRRRYPSSIPLDST--MN 178

Query:   213 WYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDQSTDTFQARYPPHGRRPIAIEC 272
             +YL+LETGRFWFPAQVYNRENGHVGFMLSCYDAELSYD  T+TFQARYPPHG+R IA+E 
Sbjct:   179 FYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDTNTFQARYPPHGKRAIAVEK 238

Query:   273 GVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCD 332
              V WER+RAAPVD SPH+L++SD LN+L PGDHIEIQWRRNKEFPYGWWY VVGH+ESCD
Sbjct:   239 DVTWERIRAAPVDASPHNLYVSDSLNELKPGDHIEIQWRRNKEFPYGWWYSVVGHMESCD 298

Query:   333 GNENFCHCHNSETLILEFNQYTPGSRWRKTTINRKDHREEGNEADGFYGGIRKVNNEEEI 392
             GN N C CHNSE ++LEFNQYT GSRWRKT INR+DHRE+GNE DGFYGGIRK+N +E+I
Sbjct:   299 GNLNHCQCHNSEMMVLEFNQYTVGSRWRKTMINRRDHREKGNEEDGFYGGIRKINCKEDI 358

Query:   393 KMWKRLWPVEVLE 405
             +MWKRLWP  +LE
Sbjct:   359 EMWKRLWPSSILE 371


>TAIR|locus:2063167 [details] [associations]
            symbol:AT2G41170 "AT2G41170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001810 Pfam:PF00646
            PROSITE:PS50181 SMART:SM00256 EMBL:CP002685
            GenomeReviews:CT485783_GR SUPFAM:SSF81383 EMBL:AC004261
            HOGENOM:HOG000030653 ProtClustDB:CLSN2679978 EMBL:BT012656
            EMBL:AK222049 IPI:IPI00522171 PIR:T02102 RefSeq:NP_850347.1
            UniGene:At.44978 ProteinModelPortal:Q6NKN8 SMR:Q6NKN8 PRIDE:Q6NKN8
            EnsemblPlants:AT2G41170.1 GeneID:818716 KEGG:ath:AT2G41170
            TAIR:At2g41170 eggNOG:NOG280905 OMA:SHVATIM PhylomeDB:Q6NKN8
            Genevestigator:Q6NKN8 Uniprot:Q6NKN8
        Length = 371

 Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
 Identities = 192/379 (50%), Positives = 248/379 (65%)

Query:    33 LRLLSLCFWKEISFFSIPSSLKNSLNITTIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMS 92
             L  +S CF   I  F I S L  S+    I      L+++        + E+ +   +MS
Sbjct:     6 LTFISFCFSITICGFLIVSWLARSIIRNGI----RTLTWRKETKRKKKNQEDEN---KMS 58

Query:    93 VLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYRE 152
             +LDLP+L L+CILEKL PS LC M +VCS LRD+C+SDHLWEKHM+ KWGR++G AA +E
Sbjct:    59 LLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQE 118

Query:   153 WQWHLAS-----RKDSTHLKQGKQRLWMKLXXXXXXXXXXXXKVHDTSKQTTTTRL-PVD 206
             W+ H+A+        S+  ++ K   W                 H    + +++ L P+D
Sbjct:   119 WKSHVATIMRCLTSSSSSSRKSKPN-WSSRFVANLKPFAWLSSNHGCENRGSSSYLAPID 177

Query:   207 SNSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDQSTDTFQARYPPHGRR 266
             S  +M WY  LE G+FWFPAQVYNRENGHVGFM+SCYDA++ YD  TDTFQARY  HGRR
Sbjct:   178 S--VMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRR 235

Query:   267 PIAIECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVG 326
               A E  V W+RLR +  DT   DLH+SDCL+ L PGDH EIQWRR KEFPYGWW+G+VG
Sbjct:   236 --AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVG 293

Query:   327 HLESCDGNENFCHCHNSETLILEFNQYTPGSRWRKTTINRKDHREEGNEADGFYGGIRKV 386
             HL++CDG +N C C + E +++EF Q+ P S WR+T I RKDHRE GNE +GFYGG++K+
Sbjct:   294 HLQNCDGVQN-CRCDSDENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKL 352

Query:   387 NNEEEIKMWKRLWPVEVLE 405
               EEEI  WK+LWP + LE
Sbjct:   353 GTEEEISTWKQLWPSQALE 371


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.455    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      405       393   0.00095  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  331 KB (2164 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.12u 0.18s 30.30t   Elapsed:  00:00:02
  Total cpu time:  30.12u 0.18s 30.30t   Elapsed:  00:00:02
  Start:  Sat May 11 06:04:52 2013   End:  Sat May 11 06:04:54 2013

Back to top