BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015516
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RY82|FB121_ARATH F-box protein At2g32560 OS=Arabidopsis thaliana GN=At2g32560 PE=2
SV=1
Length = 371
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/408 (60%), Positives = 292/408 (71%), Gaps = 40/408 (9%)
Query: 1 MLLYLIITCFSLILFLNCLALKPLPPWARPTELRLLSLCFWKEISFFSIPSSLKNSLNIT 60
MLLY +ITC S F L+L PPWA T+ L SF+ I + N+L+ T
Sbjct: 1 MLLYFLITCLSFFFFTKSLSL---PPWASETKTLL---------SFYFIKNPFMNTLHQT 48
Query: 61 TIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMSVLDLPELVLECILEKLPPSGLCNMAAVC 120
SP + +MSVLDLPEL L+CIL+ LPPSGLC+MA VC
Sbjct: 49 KHDPASPVID-------------------QMSVLDLPELALDCILDLLPPSGLCSMARVC 89
Query: 121 SSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQWHLASRK---DSTHLKQGKQRLWMKL 177
SSLR+RC+SDHLWEKH+K KWG+I+GPAA+REWQ +++S DS H + G + K+
Sbjct: 90 SSLRERCVSDHLWEKHLKTKWGKILGPAAHREWQCYISSSTYHLDSPHHQTGNLG-FAKI 148
Query: 178 FSFVRSFSWVRSKVHDTSKQTTTTRLPVDSNSIMSWYLALETGRFWFPAQVYNRENGHVG 237
S +RS S V + D ++ + LP+DS+ MS YL+LETGRFWFPAQVYNRENGHVG
Sbjct: 149 ISLIRSLSSVFRE--DKQRRGYASSLPLDSS--MSCYLSLETGRFWFPAQVYNRENGHVG 204
Query: 238 FMLSCYDAELSYDQSTDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCL 297
FMLSCYDAELSYD TDTFQARYPPHGRR AIE GV W+R+RAAP+D SPH LH+SD L
Sbjct: 205 FMLSCYDAELSYDTHTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSL 264
Query: 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGNENFCHCHNSETLILEFNQYTPGS 357
+L PGDHIEIQWRRNKEFPYGWWYG+V HLESCDG+ N CHCH SET++LEFNQYT GS
Sbjct: 265 KELKPGDHIEIQWRRNKEFPYGWWYGLVRHLESCDGDHNHCHCHLSETVVLEFNQYTVGS 324
Query: 358 RWRKTTINRKDHREEGNEADGFYGGIRKVNNEEEIKMWKRLWPVEVLE 405
RWR+T I R DH+EEGNE DGFYGGIRK+N +EEI MWKR WP +LE
Sbjct: 325 RWRRTMIMR-DHKEEGNEEDGFYGGIRKLNCKEEIAMWKRHWPCSILE 371
>sp|Q6NLB1|FB118_ARATH F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2
SV=1
Length = 371
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/407 (59%), Positives = 291/407 (71%), Gaps = 38/407 (9%)
Query: 1 MLLYLIITCFSLILFLNCLALKPLPPWARPTELRLLSLCFWKEISFFSIPSSLKNSLNIT 60
MLLYL+ITC S F P WA T+ LLS F K + NSL+
Sbjct: 1 MLLYLLITCLSFFFFS---KSLSFPQWASKTK-NLLSFYFSKYL--------FTNSLHQI 48
Query: 61 TIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMSVLDLPELVLECILEKLPPSGLCNMAAVC 120
T + SP L +MS+LDLP+L L+CILE LPPS LC MA VC
Sbjct: 49 TPDLASPVL-------------------GKMSILDLPDLPLDCILELLPPSELCTMARVC 89
Query: 121 SSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQWHLAS--RKDSTHLKQGKQRLWMKLF 178
SSLR+RC+SDHLWEKH+K KWG+I+GP+A++EWQ +L+S DS H K L K+
Sbjct: 90 SSLRERCVSDHLWEKHLKTKWGKILGPSAHKEWQCYLSSPYHLDSPHHKTSHLGL-AKII 148
Query: 179 SFVRSFSWVRSKVHDTSKQTTTTRLPVDSNSIMSWYLALETGRFWFPAQVYNRENGHVGF 238
S +RS S + D ++ + +P+DS M++YL+LETGRFWFPAQVYNRENGHVGF
Sbjct: 149 SLMRSLSSIFRD--DDHRRRYPSSIPLDST--MNFYLSLETGRFWFPAQVYNRENGHVGF 204
Query: 239 MLSCYDAELSYDQSTDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCLN 298
MLSCYDAELSYD T+TFQARYPPHG+R IA+E V WER+RAAPVD SPH+L++SD LN
Sbjct: 205 MLSCYDAELSYDTDTNTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLN 264
Query: 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGNENFCHCHNSETLILEFNQYTPGSR 358
+L PGDHIEIQWRRNKEFPYGWWY VVGH+ESCDGN N C CHNSE ++LEFNQYT GSR
Sbjct: 265 ELKPGDHIEIQWRRNKEFPYGWWYSVVGHMESCDGNLNHCQCHNSEMMVLEFNQYTVGSR 324
Query: 359 WRKTTINRKDHREEGNEADGFYGGIRKVNNEEEIKMWKRLWPVEVLE 405
WRKT INR+DHRE+GNE DGFYGGIRK+N +E+I+MWKRLWP +LE
Sbjct: 325 WRKTMINRRDHREKGNEEDGFYGGIRKINCKEDIEMWKRLWPSSILE 371
>sp|Q6NKN8|FB132_ARATH F-box protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2
SV=1
Length = 371
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/378 (51%), Positives = 248/378 (65%), Gaps = 17/378 (4%)
Query: 33 LRLLSLCFWKEISFFSIPSSLKNSLNITTIIIPSPKLSFKHMMSTSNDHVEEVSGGAEMS 92
L +S CF I F I S L S+ I + + K D +MS
Sbjct: 6 LTFISFCFSITICGFLIVSWLARSIIRNGIRTLTWRKETKRKKKNQEDE-------NKMS 58
Query: 93 VLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYRE 152
+LDLP+L L+CILEKL PS LC M +VCS LRD+C+SDHLWEKHM+ KWGR++G AA +E
Sbjct: 59 LLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQE 118
Query: 153 WQWHLASRKDSTHLKQGKQRL----WMKLF-SFVRSFSWVRSKVHDTSKQTTTTRLPVDS 207
W+ H+A+ R W F + ++ F+W+ S ++ +++ P+D
Sbjct: 119 WKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPID- 177
Query: 208 NSIMSWYLALETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDQSTDTFQARYPPHGRRP 267
S+M WY LE G+FWFPAQVYNRENGHVGFM+SCYDA++ YD TDTFQARY HGRR
Sbjct: 178 -SVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRR- 235
Query: 268 IAIECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGH 327
A E V W+RLR + DT DLH+SDCL+ L PGDH EIQWRR KEFPYGWW+G+VGH
Sbjct: 236 -AAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDHFEIQWRRTKEFPYGWWFGIVGH 294
Query: 328 LESCDGNENFCHCHNSETLILEFNQYTPGSRWRKTTINRKDHREEGNEADGFYGGIRKVN 387
L++CDG +N C C + E +++EF Q+ P S WR+T I RKDHRE GNE +GFYGG++K+
Sbjct: 295 LQNCDGVQN-CRCDSDENVVMEFRQFRPESPWRRTVIKRKDHRETGNEENGFYGGVKKLG 353
Query: 388 NEEEIKMWKRLWPVEVLE 405
EEEI WK+LWP + LE
Sbjct: 354 TEEEISTWKQLWPSQALE 371
>sp|Q9LF92|P2A15_ARATH F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1
Length = 300
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 75 MSTSNDHVEEVSGGAEMSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWE 134
+S ND ++ G + D+PE + C+ L P +CN+A + S R SD +WE
Sbjct: 5 LSNLNDGTNGLAMGPGLG--DIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWE 62
Query: 135 KHMKQKW 141
K + + +
Sbjct: 63 KKLPENY 69
>sp|A2BD94|FB31B_XENLA F-box only protein 31-B OS=Xenopus laevis GN=fbxo31-b PE=2 SV=1
Length = 523
Score = 38.5 bits (88), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWG 142
S+L LP +L I LP + L ++A VC R +D +W++ KQ++G
Sbjct: 61 SLLQLPPEILVEIFSSLPGTELPSLAQVCRKFRQILTTDTIWKRRCKQEYG 111
>sp|Q0D2D2|FBX31_XENTR F-box only protein 31 OS=Xenopus tropicalis GN=fbxo31 PE=2 SV=1
Length = 551
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWG 142
S+L LP +L I LP + L ++A VC R +D +W++ KQ++G
Sbjct: 60 SLLHLPPEILVEIFSSLPGTELPSLAQVCRKFRQILTTDTIWKRRCKQEYG 110
>sp|A2RRT3|FB31A_XENLA F-box only protein 31-A OS=Xenopus laevis GN=fbxo31-a PE=2 SV=1
Length = 519
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWG 142
S+L LP +L I LP + L +A VCS R +D +W++ +Q++G
Sbjct: 56 SLLLLPPEILVEIFSLLPGTELGGLAQVCSKFRQILTTDTIWKRRCRQEYG 106
>sp|Q9C800|FB34_ARATH Putative F-box protein At1g33530 OS=Arabidopsis thaliana
GN=At1g33530 PE=4 SV=1
Length = 441
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 94 LDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMK---QKWG 142
++LP++++E IL++LP L + ++ + SDHL EKH++ +K+G
Sbjct: 95 VELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYG 146
>sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3 OS=Oryza sativa subsp. japonica
GN=Os11g0547000 PE=2 SV=2
Length = 630
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 70 SFKHMMSTSNDHVEEVSGGAEMSVLDLPELVLE-CILEKLPPSGLCNMAAVCSSLRDRCM 128
+ + + S++H+ ++ +L L + VL IL +L P + ++ +VC+ + +
Sbjct: 200 NIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSPRDVASIGSVCTRMHELTK 259
Query: 129 SDHLWEKHMKQKWGRIV 145
+DHL + + WGR V
Sbjct: 260 NDHLRKMVCQNAWGRDV 276
>sp|Q5BJ56|FXR1_XENTR Fragile X mental retardation syndrome-related protein 1 homolog
OS=Xenopus tropicalis GN=fxr1 PE=2 SV=2
Length = 674
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 274 VPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDG 333
VP+ +R P + D ++ GD +E+ R N + P GWW V ++
Sbjct: 42 VPFHEVRMPP---------LPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFY 92
Query: 334 NENFCHCHNSETLILEFNQYTPGSRWRKTT 363
+ C + I+ F + PG++ + T
Sbjct: 93 VIEYAACDATYNEIVTFERLRPGNQNKSVT 122
>sp|Q9ZVR5|PP2B2_ARATH Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=4
SV=2
Length = 310
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 76 STSNDHVEEVSGGAEMS----VLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDH 131
S H E SGGA +S +LPE + I+ P C A+V + SD
Sbjct: 26 SMVQKHRVESSGGAIISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDS 85
Query: 132 LWEKHMKQKWGRIVGPAAY--REWQWHLASRKDSTHLKQGKQRLWMK 176
+W+K + + +V P+ + + + A + ++ G + W++
Sbjct: 86 VWDKFLPSDYSSLVPPSRVFSSKKELYFAICDNPVLVEDGGKSFWLE 132
>sp|Q9FV02|SKIP3_ARATH F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2
Length = 294
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 92 SVLD-LPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGP--- 147
S LD LPE + I+ P C AAV SD +WEK + + ++ P
Sbjct: 22 STLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSRV 81
Query: 148 -AAYREWQWHLASRKDSTHLKQGKQRLWMKLFSFVRSFSWVRSKVHDTSKQTTTTR---L 203
++ +E + L + D ++ GK LW++ S R + ++ +S + R +
Sbjct: 82 FSSKKELYFSLCN--DPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWI 139
Query: 204 PVDSNSIMSWYLALETGRFWFPAQVYNR 231
P + + E RF F ++ R
Sbjct: 140 PCPESRFETVAALREAYRFEFNCRMNTR 167
>sp|Q9ZVQ8|PP2B8_ARATH Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=4
SV=1
Length = 305
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 87 GGAEMSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVG 146
G AE+ DLPE + I+ P C +A+V + SD +WEK + ++ ++
Sbjct: 32 GVAELD--DLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLIS 89
Query: 147 PA-AYR---EWQWHLASRKDSTHLKQGKQRLWMK 176
+ A++ + + + A S + GK+ LW++
Sbjct: 90 QSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIE 123
>sp|Q9ZVR0|PP2B6_ARATH Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=4
SV=1
Length = 307
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 16/94 (17%)
Query: 95 DLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQ 154
DLPE + I+ P +C A+V S D +WEK + ++ ++ P
Sbjct: 47 DLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPP------- 99
Query: 155 WHLASRK---------DSTHLKQGKQRLWMKLFS 179
W + S K D ++ GK+ W++ S
Sbjct: 100 WRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETAS 133
>sp|Q9LEX0|P2A13_ARATH F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1
Length = 290
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 90 EMSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAA 149
++ ++DLPE + I+ +L P +C +A + R +D +WE + + R++
Sbjct: 22 KLRLVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANY-RVIAHKV 80
Query: 150 YREWQWHLASRKD 162
+ E +KD
Sbjct: 81 FDEITLTKLIKKD 93
>sp|Q6NPT8|PP2B1_ARATH F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1
Length = 336
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 96 LPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAA--YREW 153
LPE + ++ P C +A+V S++ SD +WE + ++ +V +A +
Sbjct: 35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSANHLSKK 94
Query: 154 QWHLASRKDSTHLKQGKQRLWMK 176
+ L+ +S ++ GK+ W++
Sbjct: 95 EIFLSLADNSVLVENGKKSFWVE 117
>sp|P51115|FXR1A_XENLA Fragile X mental retardation syndrome-related protein 1 homolog A
OS=Xenopus laevis GN=fxr1-a PE=1 SV=2
Length = 676
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 274 VPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDG 333
VP++ +R P + D ++ GD +E+ R N + P GWW V ++
Sbjct: 42 VPFDEVRMPP---------LPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFY 92
Query: 334 NENFCHCHNSETLILEFNQYTPGSRWRKTTIN 365
+ C + I+ F + P ++ + T N
Sbjct: 93 VIEYAACDATYNEIVTFERLRPVNQNKTVTKN 124
>sp|Q9LN77|P2A12_ARATH F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1
Length = 291
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 95 DLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKW 141
DLPE + I+E L P +C + + + R +D +WE + Q +
Sbjct: 30 DLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNY 76
>sp|Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12
PE=4 SV=1
Length = 251
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 91 MSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAY 150
M+ LDLPE + ++ P C ++AV LR S+ WE+ + + + +
Sbjct: 1 MNFLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLS 60
Query: 151 REWQWHLASR--KDSTHLKQGKQRLWMK 176
R L R + ++ G+ WM+
Sbjct: 61 RFSNKQLFLRFCESPLLIEDGRTSFWME 88
>sp|C0HAC0|FBXL5_SALSA F-box/LRR-repeat protein 5 OS=Salmo salar GN=fbxl5 PE=2 SV=1
Length = 696
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 93 VLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGR 143
+ LP +L C+ L P LC+ VCS+ D + LW +W R
Sbjct: 208 ISQLPTEILLCLFRYLGPEDLCHCGQVCSAWSDLAKTGSLWRHLYPVRWAR 258
>sp|Q7ZTQ5|FXR1B_XENLA Fragile X mental retardation syndrome-related protein 1 homolog B
OS=Xenopus laevis GN=fxr1-b PE=2 SV=1
Length = 675
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 271 ECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLES 330
E VP+ +R P + D ++ GD +E+ R N + P GWW V ++
Sbjct: 39 ERQVPFNEVRMPP---------LPDIKKEITEGDEVEVYSRANDQEPCGWWLAKVRMMKG 89
Query: 331 CDGNENFCHCHNSETLILEFNQYTPGSRWRKTTIN 365
+ C + I+ F + P ++ + T N
Sbjct: 90 EFYVIEYAACDATYNEIVTFERLRPVNQNKSVTKN 124
>sp|Q8RWD6|FB271_ARATH F-box protein At5g39450 OS=Arabidopsis thaliana GN=At5g39450 PE=2
SV=1
Length = 579
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 93 VLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLW 133
+L LPE V+ I + P +CN++ C SL D S+ +W
Sbjct: 19 LLSLPEDVIAVIARFVSPRDICNLSLCCKSLCDVVDSERIW 59
>sp|Q9ZVQ9|PP2B7_ARATH F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 91 MSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAY 150
+S+ DLPE + I+ P C A V + SD +WEK + ++ ++ +
Sbjct: 38 LSLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQ- 96
Query: 151 REWQWHLASRK--------DSTHLKQGKQRLWMK 176
H +S+K +S + K+ LW++
Sbjct: 97 -----HFSSKKELFFALCDESVLINVSKKDLWIE 125
>sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis
thaliana GN=At5g21040 PE=2 SV=1
Length = 539
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWG 142
+++DLP+ ++ IL L P L ++ V + L H W++ +++WG
Sbjct: 67 TIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFYRERWG 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,766,911
Number of Sequences: 539616
Number of extensions: 7052907
Number of successful extensions: 13289
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 13260
Number of HSP's gapped (non-prelim): 39
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)