Query 015522
Match_columns 405
No_of_seqs 136 out of 1026
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 07:06:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015522.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015522hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02491 carotenoid 9,10(9',10 100.0 2E-101 4E-106 804.4 43.1 403 2-405 142-545 (545)
2 PLN02258 9-cis-epoxycarotenoid 100.0 2.7E-96 6E-101 767.6 40.4 378 3-402 206-589 (590)
3 COG3670 Lignostilbene-alpha,be 100.0 8.6E-91 1.9E-95 684.6 27.5 345 33-397 133-489 (490)
4 PF03055 RPE65: Retinal pigmen 100.0 6.7E-88 1.5E-92 700.1 34.2 346 32-396 118-486 (486)
5 PLN02969 9-cis-epoxycarotenoid 100.0 5.9E-83 1.3E-87 673.8 37.4 347 33-396 177-610 (610)
6 KOG1285 Beta, beta-carotene 15 100.0 3.1E-51 6.8E-56 422.7 22.1 377 3-402 199-581 (582)
7 KOG1285 Beta, beta-carotene 15 99.9 2.4E-20 5.1E-25 193.7 19.6 185 31-222 138-353 (582)
8 PF02239 Cytochrom_D1: Cytochr 50.9 2.8E+02 0.006 28.0 19.0 88 264-383 272-359 (369)
9 PF10282 Lactonase: Lactonase, 49.4 1.9E+02 0.0042 28.5 11.1 100 43-148 47-163 (345)
10 PF06433 Me-amine-dh_H: Methyl 47.4 3.1E+02 0.0067 27.6 21.5 114 55-199 18-142 (342)
11 COG3823 Glutamine cyclotransfe 44.0 18 0.00039 33.9 2.4 37 39-78 95-132 (262)
12 PF02239 Cytochrom_D1: Cytochr 36.6 1.6E+02 0.0034 29.8 8.2 75 274-382 45-119 (369)
13 PF09843 DUF2070: Predicted me 36.3 38 0.00083 30.6 3.3 51 319-374 38-88 (179)
14 PF13570 PQQ_3: PQQ-like domai 28.4 73 0.0016 20.7 2.9 27 35-61 12-38 (40)
15 PF02736 Myosin_N: Myosin N-te 23.7 86 0.0019 21.1 2.5 30 331-367 3-32 (42)
16 PF14839 DOR: DOR family 21.3 87 0.0019 29.3 2.9 14 342-355 3-16 (216)
No 1
>PLN02491 carotenoid 9,10(9',10')-cleavage dioxygenase
Probab=100.00 E-value=1.8e-101 Score=804.36 Aligned_cols=403 Identities=89% Similarity=1.404 Sum_probs=357.9
Q ss_pred ccccccchhHHHHHHHHHHHHHhcccccCCCCCcceeEEEEECCEEEEEEcCCccEEEEc-CCCCCccccceeccccccC
Q 015522 2 KIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKV-LEDGDLQTLGMLDYDKRLQ 80 (405)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~ANt~V~~~~g~llAl~E~g~P~~ld~-~~~~tLeT~g~~d~~~~l~ 80 (405)
+|+.++|++|.++.++..+|..++.++...++|+|||||++|+||||||||+|.||++++ || +||||+|++||+|+|.
T Consensus 142 ~~~~~~g~~g~~~~~~~~~r~~~~~~~~~~~~~~ANT~vi~~~grLlAl~E~g~Py~l~~~Dp-~tLeT~G~~df~g~l~ 220 (545)
T PLN02491 142 KIGDLKGLFGLLMVNMQQLRAKLKVLDFSYGNGTGNTALIYHHGKLLALSEADKPYVVKVLED-GDLQTLGLLDYDKRLK 220 (545)
T ss_pred ccccccccchhhhhhhhhhhccccccccccCCCCCceeEEEECCEEEEEEcCCCCeEecCCCC-CCcceeeecccCCccC
Confidence 367888999999999999999888777777789999999999999999999999999976 44 5999999999999999
Q ss_pred CCCCCCceeeCCCCcEEEEEecCCCCeEEEEEEcCCCCeeeeEEEEeCCCcceeeeeecCCEEEEEeCCcccChHHHhhc
Q 015522 81 HSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKE 160 (405)
Q Consensus 81 ~~ftAHP~~Dp~tG~~~~fg~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~iHdf~vTeny~V~~~~P~~~~~~~~l~~ 160 (405)
.+||||||+||+||||+|||++..+++++|+++|++|++.+.+++++|.++|||||+|||||+||+++|+.+++.+|+++
T Consensus 221 ~~~TAHPk~DP~TGel~~fgy~~~~p~~~y~~~~~~G~~~~~v~i~l~~~~~~HDFaiTeny~Vf~~~Pl~~~~~~~~~~ 300 (545)
T PLN02491 221 HSFTAHPKVDPFTGEMFTFGYSHEPPYITYRVISKDGAMHDPVPITISEPIMMHDFAITENYAIFMDLPLYFRPKEMVKE 300 (545)
T ss_pred cccccCccCcCCCCCEEEEEecCCCCcEEEEEECCCCcCcceeEeecCCCceeeeeEecCCEEEEEECCcccCHHHHhhC
Confidence 89999999999999999999988778999999999999988889999999999999999999999999999999999887
Q ss_pred CCceeEEcCCCCcEEEEEeCCCCCCCceEEEEcCCeeEEecccceecCCeEEEEEEecCCCCccccchhhhhhccccccc
Q 015522 161 NKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNE 240 (405)
Q Consensus 161 ~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~fH~~NAyE~~~~ivvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (405)
++.++.|+|++++||+||||++++...++||++|+||+||++|||||+|+||+|.|++++++++...+...+..+...++
T Consensus 301 ~~~~~~~d~~~~~r~gVipR~~~~~~~irw~e~~~~f~fH~~NA~Ee~~~Ivvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (545)
T PLN02491 301 KKFIYTFDATKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVNGKVKEKLENFGNE 380 (545)
T ss_pred CCceeEECCCCCcEEEEEECCCCCCCceEEEEcCCceEeecCCccccCCeEEEEEeccCCCccccccccccccccccCce
Confidence 77889999999999999999875556899999999999999999999999999999998876544333322223345689
Q ss_pred EEEEEEeCCCCCeeEEEcccCCccCcccCCCCCCCCCceEEEeecCCCCCcCeEEEEEccCCCCCccceeeecCceeeEE
Q 015522 241 LYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIF 320 (405)
Q Consensus 241 l~R~~idl~~g~~~~~~L~~~~~EfP~In~~~~g~~yry~Y~~~~~~~~~~~~l~K~D~~t~~~~g~~~~~~~~~~~~~~ 320 (405)
|+|||||+++|+++++.|++.++|||+||++|.||+|||+|++..++...+++|+|+|+++++.+|+.+.+.+++..+.|
T Consensus 381 l~r~ridl~tg~~~~~~l~~~~~EfP~In~~~~Grk~ry~Y~~~~~~~~~~~gl~K~D~~t~~~~g~~~~~~~~~~~~~~ 460 (545)
T PLN02491 381 LYEMRFNMKTGAASQKKLSASAVDFPRVNESYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPETGKKKLEVGGNVKGIF 460 (545)
T ss_pred EEEEEEECCCCceeeeccCCcccccCccCHHHCCCcccEEEEeccCCccCcCeEEEEEecccccCCccccccccceeEEE
Confidence 99999999999999999999999999999999999999999998776667899999999974333433222234445679
Q ss_pred EcCCCccccceEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcChhhHH
Q 015522 321 DLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLE 400 (405)
Q Consensus 321 ~~~~~~~~~EPvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~~~~~ 400 (405)
|+++++|+|||+||||+++.+.+|||||||++|+|..+++|+|+||||++|++|||||++||++||+||||+|+++++|.
T Consensus 461 ~~g~~~~~~EPvFVPr~~~~~~~EDDG~ll~~V~d~~~~~S~l~VlDAk~~~~~pVA~v~LP~rVP~GfHG~fv~~~~l~ 540 (545)
T PLN02491 461 DLGPGRFGSEAIFVPREPGTTSEEDDGYLIFFVHDENTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVTEEQLQ 540 (545)
T ss_pred EcCCCccccCCEEecCCCCCCcccCCcEEEEEEEcCCCCcceEEEEeCCCCCCCeeEEEECCCCCCCCccccCcCHHHHH
Confidence 99999999999999997541258999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC
Q 015522 401 EQAKL 405 (405)
Q Consensus 401 ~~~~~ 405 (405)
+|+.+
T Consensus 541 ~~~~~ 545 (545)
T PLN02491 541 EQAKL 545 (545)
T ss_pred HhhcC
Confidence 98654
No 2
>PLN02258 9-cis-epoxycarotenoid dioxygenase NCED
Probab=100.00 E-value=2.7e-96 Score=767.60 Aligned_cols=378 Identities=43% Similarity=0.757 Sum_probs=341.3
Q ss_pred cccccchhHHHHHHHHHHHHHhcccccCCCCCcceeEEEEECCEEEEEEcCCccEEEEcCCCCCccccceeccccccCCC
Q 015522 3 IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHS 82 (405)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~ANt~V~~~~g~llAl~E~g~P~~ld~~~~~tLeT~g~~d~~~~l~~~ 82 (405)
+|++.+.++++...+.+.|.+++.++...++|+|||||++|+||||||||+|.||++|++|+.||||+|.+||+|+|..+
T Consensus 206 ~g~~~~~~g~~r~~~~~~r~~~~~~d~~~~~~~ANT~vv~~~grLlAL~E~g~Py~l~~d~~~TLeT~G~~df~g~l~~~ 285 (590)
T PLN02258 206 IGELHGHSGIARLMLFYARGLFGLVDASRGTGVANAGLVYFNGRLLAMSEDDLPYQVRITGDGDLETVGRYDFDGQLDSS 285 (590)
T ss_pred cccccccccccccchhhccccccccccccccCCCceeEEEECCEEEEEEcCCCceEecCCCCCCcccCcccccCCccCcc
Confidence 67777888899999999999999999888889999999999999999999999999998765699999999999999889
Q ss_pred CCCCceeeCCCCcEEEEEecC-CCCeEEEEEEcCCCCeeeeEEEEeCCCcceeeeeecCCEEEEEeCCcccChHHHhhcC
Q 015522 83 FTAHPKVDPYTGEMFTFGYAH-TPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKEN 161 (405)
Q Consensus 83 ftAHP~~Dp~tG~~~~fg~~~-~~~~~~~~~~~~~g~~~~~~~~~~p~~~~iHdf~vTeny~V~~~~P~~~~~~~~l~~~ 161 (405)
||||||+||.|||+++|+|+. ..|++.|+++|++|++.+.+++++|.++|||||+|||||+||+++|+.+|+.+|+. +
T Consensus 286 ftAHPKvDP~TGel~~f~y~~~~~p~l~~~~~d~~G~~~~~~~i~lp~p~~~HDFaiTenY~Vf~d~Pl~~~~~~~~~-g 364 (590)
T PLN02258 286 MIAHPKVDPVTGELFALSYDVVKKPYLKYFRFSPDGEKSPDVEIPLDQPTMMHDFAITENFVVIPDQQVVFKLSEMIR-G 364 (590)
T ss_pred cccCceEcCCCCeEEEEEEeccCCCcEEEEEECCCCCEEeeEEeeCCCCccccceeccCceEEEEccCceEcHHHHhh-C
Confidence 999999999999999999985 45899999999999999999999999999999999999999999999999999975 5
Q ss_pred CceeEEcCCCCcEEEEEeCCCCCCCceEEEEcCCeeEEecccceec--CCeEEEEEEecCCCCccccchhhhhhcccccc
Q 015522 162 KLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEE--EDEVVLITCRLDKPDLDMVNGAVKEKLENFSN 239 (405)
Q Consensus 162 ~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~fH~~NAyE~--~~~ivvd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (405)
+.++.|+|++++||+||||++++...+|||++|+||+||++||||| +|+||+|.|++.+.+. .+. +......+
T Consensus 365 ~~~~~~d~~~~srfgVipR~~~~~~~irwfe~p~~f~fH~~NA~Ee~~~~~VVvd~~~~~~~~~-~~~----~~~~~~~~ 439 (590)
T PLN02258 365 GSPVVYDKNKTSRFGVLPKNATDASEIQWVEVPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDS-IFN----ESDESLRS 439 (590)
T ss_pred CCceEECCCCCcEEEEEECCCCCCCceEEEecCCcEEEecccccccCCCCeEEEEEecccChhh-hcc----cccccccc
Confidence 6889999999999999999986556899999999999999999996 4579999999876531 111 11234568
Q ss_pred cEEEEEEeCCCCCeeEEEccc---CCccCcccCCCCCCCCCceEEEeecCCCCCcCeEEEEEccCCCCCccceeeecCce
Q 015522 240 ELYEMRFNLKTGLASQKRLSA---SAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNV 316 (405)
Q Consensus 240 ~l~R~~idl~~g~~~~~~L~~---~~~EfP~In~~~~g~~yry~Y~~~~~~~~~~~~l~K~D~~t~~~~g~~~~~~~~~~ 316 (405)
+|+||||||++|+++++.+.+ .++|||+||++|.||+|||+|+++.+++..+++|+|+|+++ |+
T Consensus 440 ~L~r~ridl~tg~~~~~~l~~~~~~~~EFP~In~~~~Grk~Ry~Y~~~~~~~~~~~givK~Dl~t----g~--------- 506 (590)
T PLN02258 440 VLSEIRLNLRTGESTRRPIISGEQVNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLST----GE--------- 506 (590)
T ss_pred eEEEEEEECCCCceeeeEeecCCCcccccceECHHHCCCccceEEEeccCCCCCCCeEEEEECCC----Cc---------
Confidence 999999999999998888765 79999999999999999999998877677799999999996 44
Q ss_pred eeEEEcCCCccccceEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcCh
Q 015522 317 RGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSE 396 (405)
Q Consensus 317 ~~~~~~~~~~~~~EPvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~ 396 (405)
.+.||+|+++|+|||+||||+++ +.+|||||||++|+|..+++|+|+||||++|+ +|||++||++||+||||+|+++
T Consensus 507 ~~~~~~g~g~~~gEPvFVPr~~~-~~~EDDGylls~V~d~~~~~SeL~IlDA~~l~--~VArv~LP~rVP~GFHG~wv~~ 583 (590)
T PLN02258 507 VKKYIYGEGRYGGEPFFVPRGSG-SEAEDDGYILAFVHDEEKGKSELQVVNAVNLE--LEATVKLPSRVPYGFHGTFISA 583 (590)
T ss_pred EEEEECCCCccccCCEeccCCCC-CcccCCcEEEEEEEECCCCceEEEEEeCCCCc--ccEEEECCCCCCCcccccccCH
Confidence 24699999999999999999975 23599999999999999999999999999998 7999999999999999999999
Q ss_pred hhHHHh
Q 015522 397 EQLEEQ 402 (405)
Q Consensus 397 ~~~~~~ 402 (405)
++|.+|
T Consensus 584 ~~l~~q 589 (590)
T PLN02258 584 EDLLKQ 589 (590)
T ss_pred HHHhhc
Confidence 999887
No 3
>COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.6e-91 Score=684.59 Aligned_cols=345 Identities=39% Similarity=0.664 Sum_probs=305.0
Q ss_pred CCcceeEEEEECCEEEEEEcCCccEEEEcCCCCCccccceeccccc-cCCCCCCCceeeCCCCcEEEEEecCCCCeEEEE
Q 015522 33 NGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKR-LQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYR 111 (405)
Q Consensus 33 ~n~ANt~V~~~~g~llAl~E~g~P~~ld~~~~~tLeT~g~~d~~~~-l~~~ftAHP~~Dp~tG~~~~fg~~~~~~~~~~~ 111 (405)
+|.|||||++|+++|+||||+|.||+||| .||+|+|+.+|+|. +..+||||||+||.|||++|||++...++++|+
T Consensus 133 kn~aNTsVi~~~~~LlalwEgG~pyrLdp---~tL~TlG~~~~~g~~~g~~fsAHPkvDp~tgel~~fg~s~~~~~l~~~ 209 (490)
T COG3670 133 KNAANTSVIMHGDELLALWEGGSPYRLDP---DTLETLGKEDFGGDPLGGPFSAHPKVDPDTGELFNFGYSFALPYLTYY 209 (490)
T ss_pred ccCCccceEeehhHHHHHHhcCCccccCh---hHhhhcChhhcCCCCCCCccccCccCCCCCceEEEEEeccCCCeeEEE
Confidence 69999999999999999999999999999 59999999999994 456799999999999999999999887899999
Q ss_pred EEcCCCCeeeeEEEEeCCCcceeeeeecCCEEEEEeCCcccChH-HHhhc--CCceeEEcCCCCcEEEEEeCCCCCCCce
Q 015522 112 VISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPK-EMVKE--NKLIFTFDDTKKARFGILPRYAKNEAQM 188 (405)
Q Consensus 112 ~~~~~g~~~~~~~~~~p~~~~iHdf~vTeny~V~~~~P~~~~~~-~~l~~--~~~~~~w~~~~~t~~~vipR~~~~~~~v 188 (405)
++|++|++++.+.+++|.+.|||||++|+||+||+++|+.+|+. ++|.. ...++.|+|+.||||.||||.+ + +++
T Consensus 210 ~v~~~G~l~r~~~i~lpg~~~~HDFa~T~~y~If~~~Pv~~d~~p~ll~~~~~~~~~~~~pe~ptri~V~pR~g-~-~~i 287 (490)
T COG3670 210 VVDADGELRRTVDIPLPGPPMMHDFAITENYLIFFDLPVTFDPVPRLLGRPADGHAMRWRPELPTRILVLPREG-D-SEI 287 (490)
T ss_pred EECCCCcEEEeeeeecCCCccceeeeecCceEEEEeCcccccchhHHhcCcccccceeecCCCCcEEEEEccCC-C-Cce
Confidence 99999999999999999999999999999999999999999964 44422 3568999999999999999996 3 689
Q ss_pred EEEEcCCeeEEecccceecC-CeEEEEEEecCCCCccccc-hhhhh--hcccccccEEEEEEeCCCCCeeEEEcccCCcc
Q 015522 189 KWFELPNCFIFHNANAWEEE-DEVVLITCRLDKPDLDMVN-GAVKE--KLENFSNELYEMRFNLKTGLASQKRLSASAVD 264 (405)
Q Consensus 189 ~~~~~~~~f~fH~~NAyE~~-~~ivvd~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~R~~idl~~g~~~~~~L~~~~~E 264 (405)
||||++|||+||+.||||++ +.|.+|.|++++.....-. +.... -.....++|+||+|||++|++..+.+.++.||
T Consensus 288 rwfE~~p~fvfH~~NAye~~d~~v~~d~~~~~~~~~~~~~~~~~~~g~~~~~a~~~L~R~~lnl~tg~v~~~~~~~r~~E 367 (490)
T COG3670 288 RWFEAEPGFVFHFLNAYEEGDEVVLVDFLRYDDFSQTLDTLGEGPGGDFRTLAPPRLHRWTLNLKTGKVAEEQLDDRACE 367 (490)
T ss_pred eEEecCCeEEEEecceeecCCCcEEEEEEeecccccccccccccccccccccCCCcceEEEEccccchhHHHhhhhhhcc
Confidence 99999999999999999996 5688899999876321110 00000 01123789999999999999999999999999
Q ss_pred CcccCCCCCCCCCceEEEeecCC-CCCcCe---EEEEEccCCCCCccceeeecCceeeEEEcCCCccccceEEeeCCCCC
Q 015522 265 FPRVNECYTGRKQRYVYGTILDS-IAKVTG---IIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGT 340 (405)
Q Consensus 265 fP~In~~~~g~~yry~Y~~~~~~-~~~~~~---l~K~D~~t~~~~g~~~~~~~~~~~~~~~~~~~~~~~EPvFVPrp~~~ 340 (405)
||+||+++.|++|||+|+....+ ...+++ |+|+|++| |+. +.+.+++++|++||+|||||++
T Consensus 368 FP~in~~~~G~p~RY~Y~~~~rp~~~l~~g~~~l~k~D~~t----g~~---------~~~~~g~~~y~~E~vfvPrpg~- 433 (490)
T COG3670 368 FPRINPRYVGQPYRYTYMSGARPGTFLFQGLQTLAKHDLET----GTS---------QVYSFGPRGYGSEPVFVPRPGS- 433 (490)
T ss_pred cCccChhhcCCceEEEEEecccCCccchhhcceeEEEeccC----CcE---------EEEecCCCCcccccccccCCCC-
Confidence 99999999999999999997653 244445 99999997 442 4799999999999999999975
Q ss_pred CCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcChh
Q 015522 341 SSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEE 397 (405)
Q Consensus 341 ~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~~ 397 (405)
++|||||||++|+|.+.++|+|+||||+++++|||||++||++||+||||.|++.+
T Consensus 434 -~~EdDGwLl~~vyd~~~~~Sel~v~DA~~~~~epIa~l~Lp~~vP~gfHG~w~~~~ 489 (490)
T COG3670 434 -SAEDDGWLLTLVYDGDRHASELLVFDAQRVTAEPIARLALPQRVPYGFHGNWVPTE 489 (490)
T ss_pred -CcCCCcEEEEEEEecCCCcceEEEEecccCCCCcceEEeccccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999875
No 4
>PF03055 RPE65: Retinal pigment epithelial membrane protein; InterPro: IPR004294 Carotenoids such as beta-carotene, lycopene, lutein and beta-cryptoxanthine are produced in plants and certain bacteria, algae and fungi, where they function as accessory photosynthetic pigments and as scavengers of oxygen radicals for photoprotection. They are also essential dietary nutrients in animals. Carotenoid oxygenases cleave a variety of carotenoids into a range of biologically important products, including apocarotenoids in plants that function as hormones, pigments, flavours, floral scents and defence compounds, and retinoids in animals that function as vitamins, visual pigments and signalling molecules []. Examples of carotenoid oxygenases include: Beta-carotene-15,15'-monooxygenase (BCDO1; 1.14.99.36 from EC) from animals, which cleaves beta-carotene symmetrically at the central double bond to yield two molecules of retinal []. Beta-carotene-9',10'-dioxygenase (BCDO2) from animals, which cleaves beta-carotene asymmetrically to apo-10'-beta-carotenal and beta-ionone, the latter being converted to retinoic acid. Lycopene is also oxidatively cleaved []. 9-cis-epoxycarotenoid dioxygenase from plants, which cleaves 9-cis xanthophylls to xanthoxin, a precursor of the hormone abscisic acid []. Apocarotenoid-15,15'-oxygenase from bacteria and cyanobacteria, which converts beta-apocarotenals rather than beta-carotene into retinal. This protein has a seven-bladed beta-propeller structure with four hisitidines that hold the iron active centre []. Retinal pigment RPE65 from animals, which in its soluble form binds all-trans retinol, and in its membrane-bound form binds all-trans retinyl esters. RPE65 is important for the production of 11-cis retinal during visual pigment regeneration []. ; PDB: 3NPE_A 2BIX_B 2BIW_A 3KVC_B 3FSN_B.
Probab=100.00 E-value=6.7e-88 Score=700.06 Aligned_cols=346 Identities=41% Similarity=0.732 Sum_probs=268.4
Q ss_pred CCCcceeEEEEECCEEEEEEcCCccEEEEcCCCCCccccceeccccccC-CCCCCCceeeCCCCcEEEEEecCC---CCe
Q 015522 32 GNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQ-HSFTAHPKVDPYTGEMFTFGYAHT---PPY 107 (405)
Q Consensus 32 ~~n~ANt~V~~~~g~llAl~E~g~P~~ld~~~~~tLeT~g~~d~~~~l~-~~ftAHP~~Dp~tG~~~~fg~~~~---~~~ 107 (405)
.+|+|||||++|+||||||||+|.||++|| +||||+|.+||++.++ ..||||||+||+||++||||++.+ .+.
T Consensus 118 ~~~~aNt~v~~~~g~llAl~E~g~p~~lDp---~TLeT~g~~~~~~~l~~~~~tAHp~~Dp~tg~l~~~~~~~~~~~~~~ 194 (486)
T PF03055_consen 118 PKNNANTNVIPHGGRLLALWEGGPPYELDP---DTLETLGPFDFDGKLPGQPFTAHPKIDPETGELYNFGYSLGPEGSPK 194 (486)
T ss_dssp B-----SEEEEETTEEEEE-TTSEEEEEET---TTCEEEEEEEGGGTSSTS---S--EEETTTTTEEEEEEECSSTTSEE
T ss_pred CCCCceeeeEEECCEEEEEEcCCCCEEech---hHhhhcCcccccccccCcccccCceEcccCCcEEEEEEEeccCCCCc
Confidence 469999999999999999999999999999 6999999999999998 789999999999999999999854 378
Q ss_pred EEEEEEcCCCCeeeeEEE-EeCCCcceeeeeecCCEEEEEeCCcccChHHHhhcCC--ceeEEcCCCCcEEEEEeCCCCC
Q 015522 108 ITYRVISKDGFMHDPVPI-TVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENK--LIFTFDDTKKARFGILPRYAKN 184 (405)
Q Consensus 108 ~~~~~~~~~g~~~~~~~~-~~p~~~~iHdf~vTeny~V~~~~P~~~~~~~~l~~~~--~~~~w~~~~~t~~~vipR~~~~ 184 (405)
++++++|++|++++.... ++|.++|||||+|||||+||+++|+.+|+.+++++.. .+++|+|+++++|+||||++++
T Consensus 195 ~~~~~~~~~g~~~~~~~~~~~~~~~~iHdf~vT~~Y~V~~~~P~~~~~~~~~~g~~~~~~~~~~p~~~t~~~VipR~~~~ 274 (486)
T PF03055_consen 195 LTVYEIDPDGKKIHRVPSFPLPRPSYIHDFAVTENYVVFPDNPLRFDPERLLLGGSPIDCLKWDPERPTRFHVIPRDGGK 274 (486)
T ss_dssp EEEEEE-TTSEEEEEEEESCCCS-B-----EE-SSEEEEEE-SEEE-HHHHHTTCCTGGCEEE-TTS-EEEEEEETTTSC
T ss_pred EEEEEEcCccceeEEeeeccCCCCcccccccccCceEEEEECCeEECHHHHhhCCcccceEEECCCCCeEEEEEECcCCC
Confidence 999999999987766666 8999999999999999999999999999999986332 7899999999999999999853
Q ss_pred CCceEEEEcCCeeEEecccceecCC---eEEEEEEecCCCCccc-c-chhh----hhhcccccccEEEEEEeCC--CCCe
Q 015522 185 EAQMKWFELPNCFIFHNANAWEEED---EVVLITCRLDKPDLDM-V-NGAV----KEKLENFSNELYEMRFNLK--TGLA 253 (405)
Q Consensus 185 ~~~v~~~~~~~~f~fH~~NAyE~~~---~ivvd~~~~~~~~~~~-~-~~~~----~~~~~~~~~~l~R~~idl~--~g~~ 253 (405)
..++||++++||+||++||||++| +||+|+|+|++..+.. . .+.. ........++|+||+||+. ++++
T Consensus 275 -~~v~~~~~~~~~~~H~~NAyE~~dg~~~iv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~R~~idl~~~~~~~ 353 (486)
T PF03055_consen 275 -SPVRWFEAPPFFVFHFVNAYEDDDGGGEIVLDACRYDDPEFLDSFYLDNLRPDGMDFNSDSPGRLRRYRIDLDSKTGRV 353 (486)
T ss_dssp -CCEEEEEETTCEEEEEEEEEEETTT-TEEEEEEEEECSSS-CGCSCHHHHCC-HHHCCCS-EEEEEEEEEETT--TCEE
T ss_pred -ceeEEEecCChhhccccceeecCCCceEEEEEEeecCCcccccccchhcccccccccccCCCceEEEEEEcccccccee
Confidence 689999999999999999999966 9999999999866421 1 0111 1122356789999999999 8888
Q ss_pred eEEEcccC-CccCcccCCCCCCCCCceEEEeecCC----CCCcCeEEEEEccCCCCCccceeeecCceeeEEEcCCCccc
Q 015522 254 SQKRLSAS-AVDFPRVNECYTGRKQRYVYGTILDS----IAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFG 328 (405)
Q Consensus 254 ~~~~L~~~-~~EfP~In~~~~g~~yry~Y~~~~~~----~~~~~~l~K~D~~t~~~~g~~~~~~~~~~~~~~~~~~~~~~ 328 (405)
+.+.|++. ++|||+||+++.|++|||+|+++... ..++++|+|+|+++ |+ .+.|++++++++
T Consensus 354 ~~~~l~~~~~~EfP~in~~~~g~~~ry~Y~~~~~~~~~~~~~~~~l~k~D~~t----g~---------~~~~~~~~~~~~ 420 (486)
T PF03055_consen 354 SEEPLDDGNPCEFPRINPRYSGRPYRYVYAVGMDPERSPGFPFNGLVKVDLET----GE---------VQRWSFGPGCFP 420 (486)
T ss_dssp EEEEEETTEEEEEEEE-GGGTTS--SEEEEEEECSCTS---EEEEEEEEETTT----TE---------EEEEE-TTTEEE
T ss_pred EHhHhccCCCcccceeCcccCCCcccEEEEEeecccCCcCcCCCEEEEEeccc----cc---------ceEEECCCCcee
Confidence 88899987 69999999999999999999876542 34689999999997 33 247999999999
Q ss_pred cceEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcCh
Q 015522 329 SEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSE 396 (405)
Q Consensus 329 ~EPvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~ 396 (405)
+||+|||||++ .+|||||||++|+|.++++|+|+||||++|++|||||++||++||+||||+|+++
T Consensus 421 ~EpvFVPr~~~--~~EdDG~Ll~~v~~~~~~~s~l~VlDA~~l~~GPvAr~~lP~~vP~gfHG~w~~~ 486 (486)
T PF03055_consen 421 GEPVFVPRPGG--AEEDDGYLLSVVYDSDTNRSELLVLDAKDLEEGPVARVELPHRVPYGFHGSWVPE 486 (486)
T ss_dssp --EEEEE-TTS---STT-EEEEEEEEETTTTCEEEEEEETTTTCE--EEEEEESS---S-SEEEEEE-
T ss_pred cceEeccCCCC--CCCCceEEEEEEEECCCCccEEEEEeCCCCCcCceEEEECCCCCCCCccccccCC
Confidence 99999999975 7999999999999999999999999999999999999999999999999999874
No 5
>PLN02969 9-cis-epoxycarotenoid dioxygenase
Probab=100.00 E-value=5.9e-83 Score=673.75 Aligned_cols=347 Identities=25% Similarity=0.457 Sum_probs=289.7
Q ss_pred CCcceeEEEEECCEEEEEEcCCccEEEEcCCCCCccccceecc-----------------------------ccccC---
Q 015522 33 NGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDY-----------------------------DKRLQ--- 80 (405)
Q Consensus 33 ~n~ANt~V~~~~g~llAl~E~g~P~~ld~~~~~tLeT~g~~d~-----------------------------~~~l~--- 80 (405)
+|+|||||++|+||||||||+|.||++|| +||||+|.+|| .|.++
T Consensus 177 kn~ANT~V~~~gg~LlAl~E~g~P~~lDP---~TLeT~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~p~ 253 (610)
T PLN02969 177 KNVANTSVLKWGGRLLCLWEGGEPYEIDS---GTLETIGRFDLAPDDDSSKDDRLQGSDAWDLAARLLKPILTGVFKMPK 253 (610)
T ss_pred ccCCCcceeeeCCEEEEecCCCCCeEcCc---CccceeecccccccccccccccccccccccccccccccccccccccCC
Confidence 69999999999999999999999999998 69999999999 33332
Q ss_pred CCCCCCceeeCCCCcEEEEEecC-----CCCeEEEEEEcCCCCeeeeEEEEeCCCcceeeeeecCCEEEEEeCCcccChH
Q 015522 81 HSFTAHPKVDPYTGEMFTFGYAH-----TPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPK 155 (405)
Q Consensus 81 ~~ftAHP~~Dp~tG~~~~fg~~~-----~~~~~~~~~~~~~g~~~~~~~~~~p~~~~iHdf~vTeny~V~~~~P~~~~~~ 155 (405)
..||||||+||.||++++|++.. ..+.+++|++|++|++.+++++++|.++|||||+|||||+||+++|+++|+.
T Consensus 254 ~~ftAHpK~DP~tg~lv~f~~~~~~~~~~~~~~~~y~~d~~G~~~~~~~~~~p~~~~iHDfaiTeny~Vf~~~P~~~d~~ 333 (610)
T PLN02969 254 KRLLSHYKIDGRRNRLLVVTCNAEDMLLPRSNFTFYEFDADFKLVQRKEFKLDDHLMIHDWAFTDTHYVLLANRVKLDVP 333 (610)
T ss_pred ccccccCCcCCCCCCEEEEEeccccccCCCceeEEEEECCCCCEecceeecCCCcceeeeeeccCCEEEEEECceecCHH
Confidence 46899999999999999999864 2368999999999999999999999999999999999999999999999998
Q ss_pred HHhh--cCC----ceeEEcCCCCc-EEEEEeCCCCCC-CceEE---EEcC-CeeEEecccceecC---C--eEEEEEEe-
Q 015522 156 EMVK--ENK----LIFTFDDTKKA-RFGILPRYAKNE-AQMKW---FELP-NCFIFHNANAWEEE---D--EVVLITCR- 217 (405)
Q Consensus 156 ~~l~--~~~----~~~~w~~~~~t-~~~vipR~~~~~-~~v~~---~~~~-~~f~fH~~NAyE~~---~--~ivvd~~~- 217 (405)
+++. .|. .+|+|+|++++ +|+||||++++. ..++| +++| +||+||++||||++ | +||+|+|.
T Consensus 334 ~~l~~~~G~~~~~~~l~wdp~~~t~~~~VipR~~~~~~~~~~W~v~~e~~~~~f~fH~~NAfEe~~~~g~~~Ivvd~~~~ 413 (610)
T PLN02969 334 GSLLAMAGLSPMISALAVDPSRPSSPVYLLPRFPEKEAGGRDWRVPVEVPSQLWLIHVGNAYEERDDRGNLRIQLHASAC 413 (610)
T ss_pred HHHHHhhcCCCchheeEECCCCCccEEEEEECcCCCcccceeeeeEEeeCCCeEEEeccceeecCCCCCceEEEEEEecc
Confidence 7552 222 56999999995 899999997532 57889 9998 59999999999963 3 49999874
Q ss_pred -cCCCCcccc------chh----hhhh--cccccccEEEEEEeCC-CCCe---eEEEcc---cCCccCcccCCCCCCCCC
Q 015522 218 -LDKPDLDMV------NGA----VKEK--LENFSNELYEMRFNLK-TGLA---SQKRLS---ASAVDFPRVNECYTGRKQ 277 (405)
Q Consensus 218 -~~~~~~~~~------~~~----~~~~--~~~~~~~l~R~~idl~-~g~~---~~~~L~---~~~~EfP~In~~~~g~~y 277 (405)
|+++.+... ... .... .....++|+||+||+. +|++ +.+.|+ +.++|||+||+++.||+|
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~idl~~~g~~~~~~~~~l~~~~~~~~EFP~In~~~~Gr~~ 493 (610)
T PLN02969 414 SYQWFSFHRMFGYDWQNKKLDPSVMNNAKGKELLPHLVQVSIDLDRTGDCRSCDVEPLSNQWEKPADFPVINPSFSGQKN 493 (610)
T ss_pred ccccccccccccccccccccCcchhcccCcccccceEEEEEEeCCcCCccccccceeeccccccccccCccChhHCCCcc
Confidence 554432100 000 0000 1123578999999996 6765 446775 779999999999999999
Q ss_pred ceEEEeecCC------CCCcCeEEEEEccCCCCCccceeeecCceeeEEEcCCCccccceEEeeCCC--CCCCCCCCeEE
Q 015522 278 RYVYGTILDS------IAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREP--GTSSEEDVGYL 349 (405)
Q Consensus 278 ry~Y~~~~~~------~~~~~~l~K~D~~t~~~~g~~~~~~~~~~~~~~~~~~~~~~~EPvFVPrp~--~~~~~EDDG~L 349 (405)
||+|+++.++ ...+++|+|+|+++ |+ .+.|+++++++++|||||||++ + +++||||||
T Consensus 494 ry~Y~~~~~~~~~~~~~~~~~~l~K~D~~t----g~---------~~~w~~g~~~~~~EPvFVPr~~~p~-~~~EDDG~L 559 (610)
T PLN02969 494 EYTYAAAASGSRKTLPHFPFDSVVKLDVPD----GS---------ARSWSTGARRFVGEPVFVPRKSSQG-GGEEDDGYV 559 (610)
T ss_pred eEEEEeeecCCCcccccCCcCeEEEEECCC----CC---------EEEEEeCCCCcccCCEEecCCCCCC-CCccCCcEE
Confidence 9999987642 23589999999996 44 2478899999999999999952 2 378999999
Q ss_pred EEEEEeCCCCceEEEEEeCCCCCCC--ceEEEEcCCcC--CCCCCccCcCh
Q 015522 350 IFFSHDEKTGKSSVNVIDAKTMSAD--PVAVVELPHRV--PYGFHAFFVSE 396 (405)
Q Consensus 350 Ls~v~d~~~~~s~LlILDA~~l~~g--pvAr~~Lp~~i--P~gfHG~w~~~ 396 (405)
|++|+|.++++|+|+||||++|++| ||||++||++| |+||||+|++.
T Consensus 560 l~~v~d~~~~~S~LvILDAk~~~eg~~PVAri~LP~~v~~P~GfHG~w~~~ 610 (610)
T PLN02969 560 LVVEYAVSDERCYLVILDAKRIGERDAVVAKLEVPKHLTFPMGFHGFWADE 610 (610)
T ss_pred EEEEEECCCCceEEEEEeCCCCcccCceeEEEECCcccCCCccccccccCC
Confidence 9999999999999999999999986 99999999998 99999999873
No 6
>KOG1285 consensus Beta, beta-carotene 15,15'-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-51 Score=422.73 Aligned_cols=377 Identities=41% Similarity=0.645 Sum_probs=323.1
Q ss_pred cccccchhHHHHHHHHHHHHHhcccccCCCCCcceeEEEEECCEEEEEEcCCccEEEEcCCCCCccc-cceeccccccCC
Q 015522 3 IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQT-LGMLDYDKRLQH 81 (405)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~ANt~V~~~~g~llAl~E~g~P~~ld~~~~~tLeT-~g~~d~~~~l~~ 81 (405)
+|++-|-+|..+++++.-|.++++.+...+...+|+..++..++++|+.|.++||..-...-..+|| ++.+++.+++..
T Consensus 199 ~G~~~g~~g~~~~~~~~~r~~~~~~~p~~~~~~~~~~~v~~~~~~~a~~~dd~~~p~yvhs~G~tenyi~~~e~~~~l~~ 278 (582)
T KOG1285|consen 199 IGTVYGHFGIARFGLFFARALTVLKNPANGVGLANAGLVWFHNRLLAYSEDDLPYPGYVHSFGDTENYIGRFEFPLRLNL 278 (582)
T ss_pred cccEEeeechhhccccccceeEEEecCCCccccccccceEeecceeeeccCCCccceEEeecCCccceEeEecCCcccch
Confidence 7889998899999999999999999888888889999999999999999998877655544478999 999999999998
Q ss_pred CCCCCceeeCCCCcEEEEEecCCC-CeEEEEEEcCCCCeeeeEEEEeCCCcceeeeeecCCEEEEEeCCcccChHHHhhc
Q 015522 82 SFTAHPKVDPYTGEMFTFGYAHTP-PYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKE 160 (405)
Q Consensus 82 ~ftAHP~~Dp~tG~~~~fg~~~~~-~~~~~~~~~~~g~~~~~~~~~~p~~~~iHdf~vTeny~V~~~~P~~~~~~~~l~~ 160 (405)
...|||++||.||+++.+.++..+ +++.|..++++|.......+....+.++|+|++|||+.|+++.++..++..+...
T Consensus 279 ~~~a~pk~~~~~g~~~~~~yd~~~~~~l~~~~~~~~~~k~~~~~~~~~~~t~hh~na~eedg~vi~D~~~~~~~~~~~~~ 358 (582)
T KOG1285|consen 279 SKFAHPKLDPVTGEWFADFYDWVPKPYLIYHKFSKEGGKSVPVEIFPSFPTFHHDNAFEEDGCVVPDLCVYFDLSEMIRD 358 (582)
T ss_pred hhhccCcccccccchhhhhhcccCCCcEEEEEeccccCccCcceeccCcceEEEeeeecccCceEEEEEEEechhhhhcc
Confidence 889999999999999999987653 7999999999988776666666689999999999999999999999999987653
Q ss_pred CCceeEEcCCCCcEEEEEeCCCCCCCceEEEEcCCeeEEecccceec-C-C-eEEEEEEecCCCCccccchhhhhhcccc
Q 015522 161 NKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEE-E-D-EVVLITCRLDKPDLDMVNGAVKEKLENF 237 (405)
Q Consensus 161 ~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~fH~~NAyE~-~-~-~ivvd~~~~~~~~~~~~~~~~~~~~~~~ 237 (405)
..+...+..+..|+.+.++...+...++|...+.+++||..|+||+ . + +++|...+....+ ....+..+..
T Consensus 359 -~~p~~~~~~k~~rfg~~~k~~~d~~~~~~p~~~~~~~~~~~~~~e~~~~~~~~~v~~~~~s~~~-----~i~~~~de~~ 432 (582)
T KOG1285|consen 359 -TSPLLYDNGKTLRFGLLSKTAPDARRIVWPLSPSKFAFHLWNNWEKKPYDWEVVVIGSCMSSTS-----TIFRESDELL 432 (582)
T ss_pred -cceeecccccccccccccccCCcccceEEEeccccccccchhhhcccCCCceEEeecccCCccc-----hhhcccccch
Confidence 3478889999999999999988888999999999999999999996 2 2 4555443333221 1112234456
Q ss_pred cccEEEEEEeCCCCCeeEEEcccC-CccCcccCCCCCCCCCceEEEeecCCCCCcCeEEEEEccCCCCCccceeeecCce
Q 015522 238 SNELYEMRFNLKTGLASQKRLSAS-AVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNV 316 (405)
Q Consensus 238 ~~~l~R~~idl~~g~~~~~~L~~~-~~EfP~In~~~~g~~yry~Y~~~~~~~~~~~~l~K~D~~t~~~~g~~~~~~~~~~ 316 (405)
..++...++++.+|...++..... ++|+++||..+.||+|||+|++..++++.+++++|+|+.++ +.
T Consensus 433 ~~~l~e~r~~~~tg~~~~~~~~~~~nl~~~~in~~~~Gkk~ryvY~ai~~~~p~~~g~vKvDl~~g----~~-------- 500 (582)
T KOG1285|consen 433 GNRLEEIRLNLKTGLEFPRPVIPKINLDFGMINRSYLGKKYRYVYGAILDPWPKVSGIVKVDLVTG----EV-------- 500 (582)
T ss_pred hceeeeeeecccccccccceeecccccccccccceeecccceEEEEEecCCccCCCeEEEEEecCC----ce--------
Confidence 678999999999988766665544 99999999999999999999999988888999999999974 31
Q ss_pred eeEEEcCCCccccceEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcCh
Q 015522 317 RGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSE 396 (405)
Q Consensus 317 ~~~~~~~~~~~~~EPvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~ 396 (405)
..|..+.+++.|||+|||+|+ +.+|||||||++|++.+.++|+|+||||++|+ ++||+++|.++|+||||.|+++
T Consensus 501 -~~w~~~~~~~~GEP~FVP~p~--~~eEDdG~Iv~~v~~~~~~~s~l~ildAK~l~--~~ar~~vp~rvP~gfHG~f~~~ 575 (582)
T KOG1285|consen 501 -KKWREGGGRPGGEPIFVPRPG--TLEEDDGYIVSVVHDESKEKSFLLILDAKTLE--EVARVEVPTRVPYGFHGTFVST 575 (582)
T ss_pred -eeEecCCCccCCCceEecCCC--CcccCCcEEEEEEEcCCCCcccEEEEeccccc--eeeEEecCCCCCCccceeEecc
Confidence 357778878878999999985 48999999999999999999999999999987 8999999999999999999999
Q ss_pred hhHHHh
Q 015522 397 EQLEEQ 402 (405)
Q Consensus 397 ~~~~~~ 402 (405)
.++..|
T Consensus 576 ~~~~~~ 581 (582)
T KOG1285|consen 576 TDLATQ 581 (582)
T ss_pred cccccc
Confidence 998776
No 7
>KOG1285 consensus Beta, beta-carotene 15,15'-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=2.4e-20 Score=193.72 Aligned_cols=185 Identities=21% Similarity=0.269 Sum_probs=141.5
Q ss_pred CCCCcceeEEEEE-CCEEEEEEcCCccEEEEcCCCCCccccceecccc-ccC-CCCCCCceeeCCCCcEEE-EEec-CCC
Q 015522 31 YGNGTANTALVYH-HGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDK-RLQ-HSFTAHPKVDPYTGEMFT-FGYA-HTP 105 (405)
Q Consensus 31 ~~~n~ANt~V~~~-~g~llAl~E~g~P~~ld~~~~~tLeT~g~~d~~~-~l~-~~ftAHP~~Dp~tG~~~~-fg~~-~~~ 105 (405)
..+|+||+++.+. |+++||.+|...-+.+|+ +||+|+..++|.+ .+. ..++|||+.|+ .|++++ +|.. .+.
T Consensus 138 ~~rd~aN~~f~pv~g~~~~~gtet~~~~ki~~---~tl~t~~~~~~~k~~v~~~~~gah~~~d~-~G~~~g~~g~~~~~~ 213 (582)
T KOG1285|consen 138 SIRDNANPNFTPVGGHHLYAGTETPHAVKIDP---GTLETTYKVRFTKTLVQEHTAGAHPHPDE-IGTVYGHFGIARFGL 213 (582)
T ss_pred ccccCCCcceeecCCCeeEecCCCceeEEecC---cccceeEeeccccceeeeeecccCCcccC-cccEEeeechhhccc
Confidence 3479999999999 899999999986677776 6999999999999 444 56789999998 599999 6654 332
Q ss_pred C----eEEEEEEcCCCCe----e----eeEEE-----EeCCCcceeeeeecCCEEEEEeCCcccChHHHhhcC-------
Q 015522 106 P----YITYRVISKDGFM----H----DPVPI-----TVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKEN------- 161 (405)
Q Consensus 106 ~----~~~~~~~~~~g~~----~----~~~~~-----~~p~~~~iHdf~vTeny~V~~~~P~~~~~~~~l~~~------- 161 (405)
. +..+... +.|.. . ....+ ..+++.|||+|++||||+|++++|+++++.+++...
T Consensus 214 ~~~r~~~~~~~p-~~~~~~~~~~~v~~~~~~~a~~~dd~~~p~yvhs~G~tenyi~~~e~~~~l~~~~~a~pk~~~~~g~ 292 (582)
T KOG1285|consen 214 FFARALTVLKNP-ANGVGLANAGLVWFHNRLLAYSEDDLPYPGYVHSFGDTENYIGRFEFPLRLNLSKFAHPKLDPVTGE 292 (582)
T ss_pred cccceeEEEecC-CCccccccccceEeecceeeeccCCCccceEEeecCCccceEeEecCCcccchhhhccCcccccccc
Confidence 2 2222221 11110 0 11111 457899999999999999999999999998886421
Q ss_pred --CceeEEcCCCCcEEEEEeCCCCCCCceEEEEcCCeeEEecccceecCCeEEEEEEecCCCC
Q 015522 162 --KLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPD 222 (405)
Q Consensus 162 --~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~fH~~NAyE~~~~ivvd~~~~~~~~ 222 (405)
..+++|.|....+++++.++++...+++. .+++++|||+||||+++.+|.|.|++.+..
T Consensus 293 ~~~~~yd~~~~~~l~~~~~~~~~~k~~~~~~--~~~~~t~hh~na~eedg~vi~D~~~~~~~~ 353 (582)
T KOG1285|consen 293 WFADFYDWVPKPYLIYHKFSKEGGKSVPVEI--FPSFPTFHHDNAFEEDGCVVPDLCVYFDLS 353 (582)
T ss_pred hhhhhhcccCCCcEEEEEeccccCccCccee--ccCcceEEEeeeecccCceEEEEEEEechh
Confidence 23578999999999999999854333443 234999999999999999999999998765
No 8
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=50.86 E-value=2.8e+02 Score=27.99 Aligned_cols=88 Identities=19% Similarity=0.217 Sum_probs=43.1
Q ss_pred cCcccCCCCCCCCCceEEEeecCCCCCcCeEEEEEccCCCCCccceeeecCceeeEEEcCCCccccceEEeeCCCCCCCC
Q 015522 264 DFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE 343 (405)
Q Consensus 264 EfP~In~~~~g~~yry~Y~~~~~~~~~~~~l~K~D~~t~~~~g~~~~~~~~~~~~~~~~~~~~~~~EPvFVPrp~~~~~~ 343 (405)
-|-+.+|. -||+|....-. +-.+.|.-+|.++.... .....+++.-+-.+-|=++
T Consensus 272 lFi~thP~-----s~~vwvd~~~~-~~~~~v~viD~~tl~~~------------~~i~~~~~~~~~h~ef~~d------- 326 (369)
T PF02239_consen 272 LFIKTHPD-----SRYVWVDTFLN-PDADTVQVIDKKTLKVV------------KTITPGPGKRVVHMEFNPD------- 326 (369)
T ss_dssp --EE--TT------SEEEEE-TT--SSHT-EEEEECCGTEEE------------E-HHHHHT--EEEEEE-TT-------
T ss_pred ceeecCCC-----CccEEeeccCC-CCCceEEEEECcCccee------------EEEeccCCCcEeccEECCC-------
Confidence 67777774 46899863221 12678999999974210 0111222211222223222
Q ss_pred CCCeEEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcCC
Q 015522 344 EDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPH 383 (405)
Q Consensus 344 EDDG~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp~ 383 (405)
++ +|...+.+.+. .|+|+|+++++ +++|+.++.
T Consensus 327 -G~-~v~vS~~~~~~---~i~v~D~~Tl~--~~~~i~~~t 359 (369)
T PF02239_consen 327 -GK-EVWVSVWDGNG---AIVVYDAKTLK--EKKRIPVPT 359 (369)
T ss_dssp -SS-EEEEEEE--TT---EEEEEETTTTE--EEEEEE--S
T ss_pred -CC-EEEEEEecCCC---EEEEEECCCcE--EEEEEEeeC
Confidence 22 45555555432 99999999997 799998653
No 9
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=49.42 E-value=1.9e+02 Score=28.52 Aligned_cols=100 Identities=17% Similarity=0.240 Sum_probs=59.8
Q ss_pred ECCEEEEEEcCC----ccEEEEcCCC-CCccccceeccccccCCCCCCCceeeCCCCcEEEEEecCCCCeEEEEEEcCCC
Q 015522 43 HHGKLLALSEAD----KPYAVKVLED-GDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDG 117 (405)
Q Consensus 43 ~~g~llAl~E~g----~P~~ld~~~~-~tLeT~g~~d~~~~l~~~ftAHP~~Dp~tG~~~~fg~~~~~~~~~~~~~~~~g 117 (405)
-+..|||..|.+ .-..++++++ .+|+-++...-.|. -..|=.+||+...++.-.| ....+.++.++.+|
T Consensus 47 ~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~----~p~~i~~~~~g~~l~vany--~~g~v~v~~l~~~g 120 (345)
T PF10282_consen 47 DGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGS----SPCHIAVDPDGRFLYVANY--GGGSVSVFPLDDDG 120 (345)
T ss_dssp TSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSS----CEEEEEECTTSSEEEEEET--TTTEEEEEEECTTS
T ss_pred CCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCC----CcEEEEEecCCCEEEEEEc--cCCeEEEEEccCCc
Confidence 567899999963 3334444333 46777766554332 2367788986444443333 34568888888888
Q ss_pred CeeeeEE-EEe----C-----CCcceeeeeecC--CEEEEEeC
Q 015522 118 FMHDPVP-ITV----S-----DPIMMHDFAITE--NYAIFMDL 148 (405)
Q Consensus 118 ~~~~~~~-~~~----p-----~~~~iHdf~vTe--ny~V~~~~ 148 (405)
.+..... +.. | ..+..|...+++ +|+..++.
T Consensus 121 ~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl 163 (345)
T PF10282_consen 121 SLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL 163 (345)
T ss_dssp EEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET
T ss_pred ccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec
Confidence 8755432 221 2 357889999985 47766653
No 10
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=47.42 E-value=3.1e+02 Score=27.57 Aligned_cols=114 Identities=13% Similarity=0.257 Sum_probs=65.6
Q ss_pred ccEEEEcCCCCCccccceeccccccCCCCCCCceeeCCCCcEEEEEe--cCC---CCeEEEEEEcCCCCeeeeEEEEeCC
Q 015522 55 KPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY--AHT---PPYITYRVISKDGFMHDPVPITVSD 129 (405)
Q Consensus 55 ~P~~ld~~~~~tLeT~g~~d~~~~l~~~ftAHP~~Dp~tG~~~~fg~--~~~---~~~~~~~~~~~~g~~~~~~~~~~p~ 129 (405)
+-|.+|. ++..-+|.++- .+.+|..+.|+..++|.-.. +.+ ...=++.++|.+.- .....|.||.
T Consensus 18 rv~viD~---d~~k~lGmi~~------g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL-~~~~EI~iP~ 87 (342)
T PF06433_consen 18 RVYVIDA---DSGKLLGMIDT------GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTL-SPTGEIEIPP 87 (342)
T ss_dssp EEEEEET---TTTEEEEEEEE------ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTT-EEEEEEEETT
T ss_pred eEEEEEC---CCCcEEEEeec------ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcC-cccceEecCC
Confidence 3466666 36566665553 46788888887666765443 211 12233555666543 2334556763
Q ss_pred C------cceeeeeecCCEEEEEeCCcccChHHHhhcCCceeEEcCCCCcEEEEEeCCCCCCCceEEEEcCCeeEE
Q 015522 130 P------IMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIF 199 (405)
Q Consensus 130 ~------~~iHdf~vTeny~V~~~~P~~~~~~~~l~~~~~~~~w~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~f 199 (405)
- .+-+.+++|. .++..+.++-..-+-+.||+-.. .+-++.+++|.|+..
T Consensus 88 k~R~~~~~~~~~~~ls~-------------------dgk~~~V~N~TPa~SVtVVDl~~--~kvv~ei~~PGC~~i 142 (342)
T PF06433_consen 88 KPRAQVVPYKNMFALSA-------------------DGKFLYVQNFTPATSVTVVDLAA--KKVVGEIDTPGCWLI 142 (342)
T ss_dssp S-B--BS--GGGEEE-T-------------------TSSEEEEEEESSSEEEEEEETTT--TEEEEEEEGTSEEEE
T ss_pred cchheecccccceEEcc-------------------CCcEEEEEccCCCCeEEEEECCC--CceeeeecCCCEEEE
Confidence 1 2344444442 24555566666678999999886 346778899877654
No 11
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=44.02 E-value=18 Score=33.85 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=30.7
Q ss_pred EEEEECCEEEEE-EcCCccEEEEcCCCCCccccceeccccc
Q 015522 39 ALVYHHGKLLAL-SEADKPYAVKVLEDGDLQTLGMLDYDKR 78 (405)
Q Consensus 39 ~V~~~~g~llAl-~E~g~P~~ld~~~~~tLeT~g~~d~~~~ 78 (405)
.+..+++.+|+| |--|..|..|+ .||+++|++.|.|+
T Consensus 95 Git~~gd~~y~LTw~egvaf~~d~---~t~~~lg~~~y~Ge 132 (262)
T COG3823 95 GITKLGDYFYQLTWKEGVAFKYDA---DTLEELGRFSYEGE 132 (262)
T ss_pred ceeeccceEEEEEeccceeEEECh---HHhhhhcccccCCc
Confidence 356789999998 66677788888 59999999999875
No 12
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=36.56 E-value=1.6e+02 Score=29.78 Aligned_cols=75 Identities=23% Similarity=0.311 Sum_probs=43.5
Q ss_pred CCCCceEEEeecCCCCCcCeEEEEEccCCCCCccceeeecCceeeEEEcCCCccccceEEeeCCCCCCCCCCCeEEEEEE
Q 015522 274 GRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFS 353 (405)
Q Consensus 274 g~~yry~Y~~~~~~~~~~~~l~K~D~~t~~~~g~~~~~~~~~~~~~~~~~~~~~~~EPvFVPrp~~~~~~EDDG~LLs~v 353 (405)
...-||+|-++.+ ..|.++|+.+.+.. .....+ .+|.=|.= ..|.-||++..
T Consensus 45 s~Dgr~~yv~~rd-----g~vsviD~~~~~~v------------~~i~~G-----~~~~~i~~------s~DG~~~~v~n 96 (369)
T PF02239_consen 45 SPDGRYLYVANRD-----GTVSVIDLATGKVV------------ATIKVG-----GNPRGIAV------SPDGKYVYVAN 96 (369)
T ss_dssp TT-SSEEEEEETT-----SEEEEEETTSSSEE------------EEEE-S-----SEEEEEEE--------TTTEEEEEE
T ss_pred cCCCCEEEEEcCC-----CeEEEEECCcccEE------------EEEecC-----CCcceEEE------cCCCCEEEEEe
Confidence 3446899987643 47999999974321 112222 23332222 12444888877
Q ss_pred EeCCCCceEEEEEeCCCCCCCceEEEEcC
Q 015522 354 HDEKTGKSSVNVIDAKTMSADPVAVVELP 382 (405)
Q Consensus 354 ~d~~~~~s~LlILDA~~l~~gpvAr~~Lp 382 (405)
+.. ..+.|+|+++++ ++.++...
T Consensus 97 ~~~----~~v~v~D~~tle--~v~~I~~~ 119 (369)
T PF02239_consen 97 YEP----GTVSVIDAETLE--PVKTIPTG 119 (369)
T ss_dssp EET----TEEEEEETTT----EEEEEE--
T ss_pred cCC----CceeEecccccc--ceeecccc
Confidence 764 489999999987 89988765
No 13
>PF09843 DUF2070: Predicted membrane protein (DUF2070); InterPro: IPR019204 This domain of unknown function is found in various bacterial and archael hypothetical proteins, as well as in prokaryotic polyketide synthase.
Probab=36.32 E-value=38 Score=30.55 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=38.7
Q ss_pred EEEcCCCccccceEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEeCCCCCCC
Q 015522 319 IFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSAD 374 (405)
Q Consensus 319 ~~~~~~~~~~~EPvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILDA~~l~~g 374 (405)
.+.++-|+..++|.+.+.. +=+++-+.+++.+...+++.|+++|+.+|+.|
T Consensus 38 ~~~~~~G~~~~~~~~~~~~-----~lg~~gi~~~~v~~~g~~~~lv~~DsNNm~~~ 88 (179)
T PF09843_consen 38 EYPLEVGYAEAEPFLGEHE-----GLGIGGISALVVEVGGQRSALVLADSNNMEPG 88 (179)
T ss_pred ccccccceEeccCCCCCCC-----CcCccccEEEEEEeCCcEEEEEEEECCCCCHH
Confidence 3456667777777744442 34688899999998889999999999999853
No 14
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=28.41 E-value=73 Score=20.71 Aligned_cols=27 Identities=11% Similarity=0.140 Sum_probs=19.1
Q ss_pred cceeEEEEECCEEEEEEcCCccEEEEc
Q 015522 35 TANTALVYHHGKLLALSEADKPYAVKV 61 (405)
Q Consensus 35 ~ANt~V~~~~g~llAl~E~g~P~~ld~ 61 (405)
..+.++...+|++|+.++.|.-|.+|+
T Consensus 12 ~~~~~~~v~~g~vyv~~~dg~l~ald~ 38 (40)
T PF13570_consen 12 PIWSSPAVAGGRVYVGTGDGNLYALDA 38 (40)
T ss_dssp ---S--EECTSEEEEE-TTSEEEEEET
T ss_pred CcCcCCEEECCEEEEEcCCCEEEEEeC
Confidence 455677888999999999998899987
No 15
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold. It is found at the N terminus of many but not all myosins. The function of this domain is unknown.; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 2EC6_A 2W4H_M 1O1E_P 1O1D_D 1O18_A 1O1C_P 1O1B_D 1O1F_A 2W4A_M 2W4G_M ....
Probab=23.67 E-value=86 Score=21.12 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=20.1
Q ss_pred eEEeeCCCCCCCCCCCeEEEEEEEeCCCCceEEEEEe
Q 015522 331 AVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVID 367 (405)
Q Consensus 331 PvFVPrp~~~~~~EDDG~LLs~v~d~~~~~s~LlILD 367 (405)
-++||.+ .+||++.-+.+...+.-.+-..|
T Consensus 3 ~vWvpD~-------~egfv~g~I~~~~g~~vtV~~~~ 32 (42)
T PF02736_consen 3 WVWVPDP-------KEGFVKGEIIEEEGDKVTVKTED 32 (42)
T ss_dssp EEEEEES-------SSSEEEEEEEEEESSEEEEEETT
T ss_pred EEEEeCC-------cccEEEEEEEEEcCCEEEEEECC
Confidence 3688885 56999999997655544444444
No 16
>PF14839 DOR: DOR family
Probab=21.26 E-value=87 Score=29.35 Aligned_cols=14 Identities=29% Similarity=0.321 Sum_probs=12.6
Q ss_pred CCCCCeEEEEEEEe
Q 015522 342 SEEDVGYLIFFSHD 355 (405)
Q Consensus 342 ~~EDDG~LLs~v~d 355 (405)
++|||||||+=+.+
T Consensus 3 e~edD~WilVD~~~ 16 (216)
T PF14839_consen 3 EEEDDEWILVDFID 16 (216)
T ss_pred ccccCCeEEEEecC
Confidence 68999999998887
Done!