Query 015522
Match_columns 405
No_of_seqs 136 out of 1026
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 14:05:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015522.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015522hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zaka2 g.41.2.1 (A:128-158) M 50.5 3.4 0.00025 23.9 1.5 15 88-102 3-17 (31)
2 d1qksa2 b.70.2.1 (A:136-567) C 21.8 34 0.0025 30.8 4.3 33 348-382 381-413 (432)
3 d2ap1a2 c.55.1.10 (A:1-117) Pu 18.6 82 0.0059 22.3 5.2 32 96-128 1-32 (117)
4 d1hzua2 b.70.2.1 (A:118-543) C 18.4 42 0.0031 29.6 4.0 33 348-382 375-407 (426)
5 d1k91a_ b.104.1.1 (A:) Calreti 16.1 31 0.0022 20.5 1.5 11 329-339 1-11 (37)
6 d1m7ja2 b.92.1.6 (A:420-480) N 15.9 11 0.00077 25.0 -0.8 36 360-397 7-42 (61)
7 d1z6ra2 c.55.1.10 (A:82-210) M 9.9 1.8E+02 0.013 20.5 5.0 34 95-128 3-36 (129)
8 d2aa4a1 c.55.1.10 (A:1-119) N- 9.5 1.5E+02 0.011 20.8 4.3 32 97-128 2-33 (119)
9 d2mysa1 b.34.3.1 (A:34-79) Myo 8.2 1E+02 0.0074 19.0 2.2 21 332-359 5-25 (46)
10 d1q1ca2 d.26.1.1 (A:141-257) F 7.2 1.4E+02 0.0099 21.3 3.0 25 369-393 69-93 (117)
No 1
>d1zaka2 g.41.2.1 (A:128-158) Microbial and mitochondrial ADK, insert "zinc finger" domain {Maize (Zea mays) [TaxId: 4577]}
Probab=50.54 E-value=3.4 Score=23.93 Aligned_cols=15 Identities=33% Similarity=0.957 Sum_probs=12.0
Q ss_pred eeeCCCCcEEEEEec
Q 015522 88 KVDPYTGEMFTFGYA 102 (405)
Q Consensus 88 ~~Dp~tG~~~~fg~~ 102 (405)
+.||.||++|-.-+.
T Consensus 3 R~DP~TG~iYH~~f~ 17 (31)
T d1zaka2 3 RLDPVTGKIYHLKYS 17 (31)
T ss_dssp EECTTTCCEEESSSS
T ss_pred cCCCCCCcEeEEecC
Confidence 579999999976554
No 2
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=21.85 E-value=34 Score=30.76 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=25.6
Q ss_pred EEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcC
Q 015522 348 YLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELP 382 (405)
Q Consensus 348 ~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp 382 (405)
+|++.++...+..+.++|.|+++++ ..+++.-|
T Consensus 381 ~v~~S~~~~~~~~g~i~i~D~~T~k--~~~~i~~~ 413 (432)
T d1qksa2 381 EVWFSVWNGKDQESALVVVDDKTLE--LKHVIKDE 413 (432)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTE--EEEEECCT
T ss_pred EEEEEEecCCCCCCcEEEEECCCce--EEeEecCC
Confidence 6777777766677899999999887 56777664
No 3
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}
Probab=18.64 E-value=82 Score=22.26 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=24.7
Q ss_pred EEEEEecCCCCeEEEEEEcCCCCeeeeEEEEeC
Q 015522 96 MFTFGYAHTPPYITYRVISKDGFMHDPVPITVS 128 (405)
Q Consensus 96 ~~~fg~~~~~~~~~~~~~~~~g~~~~~~~~~~p 128 (405)
|| +|+..+...+.+-.+|.+|++..+..++.|
T Consensus 1 My-iGiDiGgT~i~~~l~d~~g~i~~~~~~~t~ 32 (117)
T d2ap1a2 1 MY-YGFDIGGTKIALGVFDSTRRLQWEKRVPTP 32 (117)
T ss_dssp EE-EEEEECSSEEEEEEEETTCCEEEEEEEECC
T ss_pred CE-EEEEECcceEEEEEEeCCCCEEEEEEEeec
Confidence 45 788888888999999999998776654443
No 4
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=18.36 E-value=42 Score=29.60 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=25.6
Q ss_pred EEEEEEEeCCCCceEEEEEeCCCCCCCceEEEEcC
Q 015522 348 YLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELP 382 (405)
Q Consensus 348 ~LLs~v~d~~~~~s~LlILDA~~l~~gpvAr~~Lp 382 (405)
+|++.++..+...+.+.|.|+++++ +++++.-+
T Consensus 375 ~i~vs~~~~~~~~~~i~v~D~~T~k--~~~~i~~~ 407 (426)
T d1hzua2 375 EVWFSVWNGKNDSSALVVVDDKTLK--LKAVVKDP 407 (426)
T ss_dssp EEEEEECCCTTSCCEEEEEETTTTE--EEEEECCT
T ss_pred EEEEEEecCCCCCCeEEEEECCCCe--EEEEECCC
Confidence 6777777766777889999999887 67776544
No 5
>d1k91a_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=16.06 E-value=31 Score=20.50 Aligned_cols=11 Identities=9% Similarity=0.292 Sum_probs=9.4
Q ss_pred cceEEeeCCCC
Q 015522 329 SEAVFVPREPG 339 (405)
Q Consensus 329 ~EPvFVPrp~~ 339 (405)
+||-|||.|.+
T Consensus 1 ~eP~~IpDp~A 11 (37)
T d1k91a_ 1 GKPEHIPDPDA 11 (37)
T ss_dssp CCCSEEECSSC
T ss_pred CCccccCCCCC
Confidence 69999999865
No 6
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]}
Probab=15.93 E-value=11 Score=25.03 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=27.8
Q ss_pred ceEEEEEeCCCCCCCceEEEEcCCcCCCCCCccCcChh
Q 015522 360 KSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEE 397 (405)
Q Consensus 360 ~s~LlILDA~~l~~gpvAr~~Lp~~iP~gfHG~w~~~~ 397 (405)
..+|+|||..++.+ -|...-|+..+-|++..|+...
T Consensus 7 ~ADlvvfDp~~i~d--~~~~~~~~~~~~Gi~~v~VnG~ 42 (61)
T d1m7ja2 7 YADLVVFDPATVAD--SATFEHPTERAAGIHSVYVNGA 42 (61)
T ss_dssp BCCEEEECTTTCBC--CCCSSSTTCCCBSEEEEEETTE
T ss_pred CCCEEEECHHHccC--cccccccccccceeEEEEECCE
Confidence 35899999998874 4777778888888888887654
No 7
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=9.92 E-value=1.8e+02 Score=20.52 Aligned_cols=34 Identities=3% Similarity=-0.131 Sum_probs=26.3
Q ss_pred cEEEEEecCCCCeEEEEEEcCCCCeeeeEEEEeC
Q 015522 95 EMFTFGYAHTPPYITYRVISKDGFMHDPVPITVS 128 (405)
Q Consensus 95 ~~~~fg~~~~~~~~~~~~~~~~g~~~~~~~~~~p 128 (405)
..+..|+..+...+.+...|.+|++..+..++++
T Consensus 3 ~~~~l~i~i~~~~i~~~l~Dl~G~~l~~~~~~~~ 36 (129)
T d1z6ra2 3 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELA 36 (129)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC
T ss_pred ceEEEEEEECCCEEEEEEEcCCCCEEEEEEeecc
Confidence 3456677777788999999999999877666665
No 8
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}
Probab=9.50 E-value=1.5e+02 Score=20.79 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=24.2
Q ss_pred EEEEecCCCCeEEEEEEcCCCCeeeeEEEEeC
Q 015522 97 FTFGYAHTPPYITYRVISKDGFMHDPVPITVS 128 (405)
Q Consensus 97 ~~fg~~~~~~~~~~~~~~~~g~~~~~~~~~~p 128 (405)
...|+..+...+.+-.+|.+|++..+..++.|
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~i~~~~~~~~~ 33 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTP 33 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC
T ss_pred eEEEEEeCcCEEEEEEEcCCCCEEEeEEEecc
Confidence 34577778888999999999998776655444
No 9
>d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=8.25 E-value=1e+02 Score=18.96 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=15.2
Q ss_pred EEeeCCCCCCCCCCCeEEEEEEEeCCCC
Q 015522 332 VFVPREPGTSSEEDVGYLIFFSHDEKTG 359 (405)
Q Consensus 332 vFVPrp~~~~~~EDDG~LLs~v~d~~~~ 359 (405)
+|||.+ -+|||-+.+-....+
T Consensus 5 vwVpD~-------ke~yv~~~Iks~~Gd 25 (46)
T d2mysa1 5 VFVVHP-------KQSFVKGTIQSKEGG 25 (46)
T ss_dssp EEEECS-------SSSEEEEEEEEECSS
T ss_pred EEcccC-------cccEEEEEEEEccCC
Confidence 688884 678998888765443
No 10
>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.20 E-value=1.4e+02 Score=21.26 Aligned_cols=25 Identities=16% Similarity=0.127 Sum_probs=22.1
Q ss_pred CCCCCCceEEEEcCCcCCCCCCccC
Q 015522 369 KTMSADPVAVVELPHRVPYGFHAFF 393 (405)
Q Consensus 369 ~~l~~gpvAr~~Lp~~iP~gfHG~w 393 (405)
..|..|..|++.+|....||=.|+.
T Consensus 69 ~~M~~Ge~~~i~ip~~~ayG~~g~~ 93 (117)
T d1q1ca2 69 QRMEKGEHSIVYLKPSYAFGSVGKE 93 (117)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBG
T ss_pred hcchhhCeEEEEECHHHhCcccCCC
Confidence 4789999999999999999988864
Done!